Euteleostomi	ANCESTRAL SPECIES	15	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000166514	ENSGT00940000156593 #30	ENSGT00390000012377	ENSGT00940000158586	ENSGT00940000158712	ENSGT00390000005033	ENSGT00940000154514	ENSGT00940000164539
Sarcopterygii	ANCESTRAL SPECIES	7	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000166514	ENSGT00940000156593 #30	ENSGT00390000012377	ENSGT00940000158586	ENSGT00940000158712	ENSGT00390000005033	ENSGT00940000154514	ENSGT00940000164539
Tetrapoda	ANCESTRAL SPECIES	23	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30
Amniota	ANCESTRAL SPECIES	8	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Mammalia	ANCESTRAL SPECIES	26	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Theria	ANCESTRAL SPECIES	14	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Eutheria	ANCESTRAL SPECIES	12	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT01090000260413	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT01090000260413	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34
Carnivora	ANCESTRAL SPECIES		ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Felidae	ANCESTRAL SPECIES	1	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502.e #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Panthera	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502.e.a #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Panthera_a	ANCESTRAL SPECIES	7	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502.e.a #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
leopard	MODERN SPECIES	21	PSMC6 (ENSPPRG00000009673) #7	ERO1A (ENSPPRG00000009080) #8	GPR137C (ENSPPRG00000008293) #9	TXNDC16 (ENSPPRG00000007881) #10	PTGER2 (ENSPPRG00000006565) #11	PTGDR (ENSPPRG00000005514) #12	NID2 (ENSPPRG00000004690) #13	ENSPPRG00000003379 #14	GNG2 (ENSPPRG00000003065) #15	FRMD6 (ENSPPRG00000002191) #16	TMX1 (ENSPPRG00000001600) #17	TRIM9 (ENSPPRG00000001343) #18	PYGL (ENSPPRG00000000348) #19	ABHD12B (ENSPPRG00000024010) #20	NIN (ENSPPRG00000019915) #21	SAV1 (ENSPPRG00000007998) #22	ATL1 (ENSPPRG00000007854) #23	MAP4K5 (ENSPPRG00000006661) #24	CDKL1 (ENSPPRG00000005762) #25	ENSPPRG00000005231 #26	L2HGDH (ENSPPRG00000004990) #27	SOS2 (ENSPPRG00000003514) #28	VCPKMT (ENSPPRG00000002795) #29	ARF6 (ENSPPRG00000015754) #30	NEMF (ENSPPRG00000002202) #31	KLHDC2 (ENSPPRG00000001279) #32	KLHDC1 (ENSPPRG00000000142) #33	POLE2 (ENSPPRG00000023043) #34	DNAAF2 (ENSPPRG00000024751) #35	RPL36AL (ENSPPRG00000015457) #36	LRR1 (ENSPPRG00000022551) #37
lion	MODERN SPECIES	6	PSMC6 (ENSPLOG00000003094) #7	ERO1A (ENSPLOG00000003049) #8	GPR137C (ENSPLOG00000003020) #9	TXNDC16 (ENSPLOG00000002937) #10	PTGER2 (ENSPLOG00000002887) #11	PTGDR (ENSPLOG00000002865) #12	NID2 (ENSPLOG00000002747) #13	RTRAF (ENSPLOG00000002680) #14	GNG2 (ENSPLOG00000002664) #15	FRMD6 (ENSPLOG00000002636) #16	TMX1 (ENSPLOG00000002590) #17	TRIM9 (ENSPLOG00000002562) #18	ABHD12B (ENSPLOG00000002496) #20	PYGL (ENSPLOG00000002325) #19	NIN (ENSPLOG00000001807) #21	SAV1 (ENSPLOG00000001522) #22	ATL1 (ENSPLOG00000001434) #23	MAP4K5 (ENSPLOG00000001362) #24	CDKL1 (ENSPLOG00000001322) #25	ENSPLOG00000001255 #26	L2HGDH (ENSPLOG00000001197) #27	SOS2 (ENSPLOG00000001026) #28	VCPKMT (ENSPLOG00000000948) #29	ARF6 (ENSPLOG00000000935) #30	NEMF (ENSPLOG00000000814) #31	KLHDC2 (ENSPLOG00000000674) #32	KLHDC1 (ENSPLOG00000000582) #33	POLE2 (ENSPLOG00000004310) #34	DNAAF2 (ENSPLOG00000004289) #35	MGAT2 (ENSPLOG00000004277)	RPL36AL (ENSPLOG00000004270) #36
Tiger	MODERN SPECIES	573	STYX (ENSPTIG00000012223)	PSMC6 (ENSPTIG00000008522) #7	ERO1A (ENSPTIG00000000270) #8	GPR137C (ENSPTIG00000020094) #9	TXNDC16 (ENSPTIG00000019619) #10	ENSPTIG00000018741 #11	NID2 (ENSPTIG00000015778) #13	RTRAF (ENSPTIG00000014602) #14	GNG2 (ENSPTIG00000013665) #15	FRMD6 (ENSPTIG00000009476) #16	TMX1 (ENSPTIG00000008851) #17	TRIM9 (ENSPTIG00000007199) #18	ABHD12B (ENSPTIG00000020897) #20	PYGL (ENSPTIG00000016295) #19	NIN (ENSPTIG00000005629) #21	SAV1 (ENSPTIG00000004576) #22	ATL1 (ENSPTIG00000019899) #23	MAP4K5 (ENSPTIG00000018022) #24	CDKL1 (ENSPTIG00000016467) #25	ENSPTIG00000016027 #26	L2HGDH (ENSPTIG00000013340) #27	SOS2 (ENSPTIG00000008451) #28	VCPKMT (ENSPTIG00000007149) #29	ARF6 (ENSPTIG00000006416) #30	NEMF (ENSPTIG00000005569) #31	KLHDC2 (ENSPTIG00000020283) #32	KLHDC1 (ENSPTIG00000019001) #33	POLE2 (ENSPTIG00000014797) #34	ENSPTIG00000014371 #35	MGAT2 (ENSPTIG00000006247)	LRR1 (ENSPTIG00000012978) #37
Cat	MODERN SPECIES	237	PSMC6 (ENSFCAG00000012975) #7	ERO1A (ENSFCAG00000031729) #8	GPR137C (ENSFCAG00000010457) #9	TXNDC16 (ENSFCAG00000024023) #10	PTGDR (ENSFCAG00000045717) #12	NID2 (ENSFCAG00000042061) #13	RTRAF (ENSFCAG00000002663) #14	ENSFCAG00000045607 #15	FRMD6 (ENSFCAG00000025858) #16	TMX1 (ENSFCAG00000041427) #17	TRIM9 (ENSFCAG00000002779) #18	ENSFCAG00000049460	PYGL (ENSFCAG00000002778) #19	ABHD12B (ENSFCAG00000002777) #20	NIN (ENSFCAG00000022076) #21	SAV1 (ENSFCAG00000024173) #22	ATL1 (ENSFCAG00000028445) #23	MAP4K5 (ENSFCAG00000018425) #24	CDKL1 (ENSFCAG00000029255) #25	ENSFCAG00000029962 #26	L2HGDH (ENSFCAG00000025658) #27	SOS2 (ENSFCAG00000031655) #28	VCPKMT (ENSFCAG00000025771) #29	ENSFCAG00000051973	NEMF (ENSFCAG00000018946) #31	KLHDC2 (ENSFCAG00000031902) #32	KLHDC1 (ENSFCAG00000036283) #33	POLE2 (ENSFCAG00000009126) #34	DNAAF2 (ENSFCAG00000022138) #35	MGAT2 (ENSFCAG00000022561)	RPL36AL (ENSFCAG00000026053) #36
Caniformia	ANCESTRAL SPECIES	15	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Caniformia_b	ANCESTRAL SPECIES	14	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00940000154720.d	ENSGT00940000168019	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34
Mustelinae	ANCESTRAL SPECIES	14	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00940000174635	ENSGT00510000048466 #35	ENSGT00390000007341.a
American mink	MODERN SPECIES		PSMC6 (ENSNVIG00000002110) #7	ERO1A (ENSNVIG00000002058) #8	GPR137C (ENSNVIG00000002040) #9	TXNDC16 (ENSNVIG00000001988) #10	PTGER2 (ENSNVIG00000001975) #11	PTGDR (ENSNVIG00000001973) #12	NID2 (ENSNVIG00000001887) #13	ENSNVIG00000001858 #14	GNG2 (ENSNVIG00000001833) #15	FRMD6 (ENSNVIG00000001769) #16	TMX1 (ENSNVIG00000001705) #17	TRIM9 (ENSNVIG00000001689) #18	PYGL (ENSNVIG00000001591) #19	ABHD12B (ENSNVIG00000001517) #20	NIN (ENSNVIG00000001047) #21	SAV1 (ENSNVIG00000000994) #22	ATL1 (ENSNVIG00000000924) #23	MAP4K5 (ENSNVIG00000000900) #24	CDKL1 (ENSNVIG00000000890) #25	DMAC2L (ENSNVIG00000000850) #26	ENSNVIG00000000847 #27	SOS2 (ENSNVIG00000000740) #28	MT21D (ENSNVIG00000000711) #29	ARF6 (ENSNVIG00000000704) #30	NEMF (ENSNVIG00000000665) #31	KLHDC2 (ENSNVIG00000000566) #32	KLHDC1 (ENSNVIG00000000539) #33	ENSNVIG00000000530	DNAAF2 (ENSNVIG00000000507) #35	MGAT2 (ENSNVIG00000000500)	RPL36AL (ENSNVIG00000000493) #36
Ferret	MODERN SPECIES	164	GNPNAT1 (ENSMPUG00000005416)	PSMC6 (ENSMPUG00000005405) #7	ERO1A (ENSMPUG00000005389) #8	GPR137C (ENSMPUG00000005376) #9	TXNDC16 (ENSMPUG00000005348) #10	PTGER2 (ENSMPUG00000005341) #11	PTGDR (ENSMPUG00000005334) #12	NID2 (ENSMPUG00000005320) #13	RTRAF (ENSMPUG00000005253) #14	FRMD6 (ENSMPUG00000005241) #16	TMX1 (ENSMPUG00000005236) #17	TRIM9 (ENSMPUG00000005230) #18	PYGL (ENSMPUG00000005218) #19	ABHD12B (ENSMPUG00000005144) #20	NIN (ENSMPUG00000005126) #21	SAV1 (ENSMPUG00000005119) #22	ATL1 (ENSMPUG00000005107) #23	ENSMPUG00000019630	MAP4K5 (ENSMPUG00000005086) #24	CDKL1 (ENSMPUG00000005078) #25	DMAC2L (ENSMPUG00000005052) #26	L2HGDH (ENSMPUG00000005038) #27	SOS2 (ENSMPUG00000005022) #28	VCPKMT (ENSMPUG00000004994) #29	ARF6 (ENSMPUG00000019627) #30	NEMF (ENSMPUG00000004978) #31	KLHDC2 (ENSMPUG00000004970) #32	KLHDC1 (ENSMPUG00000004962) #33	POLE2 (ENSMPUG00000004950) #34	MGAT2 (ENSMPUG00000019625)	LRR1 (ENSMPUG00000004946) #37
Ursidae	ANCESTRAL SPECIES	10	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Ursus	ANCESTRAL SPECIES	98											ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
American black bear	MODERN SPECIES	5059																SAV1 (ENSUAMG00000024883) #22	ATL1 (ENSUAMG00000024884) #23	MAP4K5 (ENSUAMG00000024898) #24
Polar bear	MODERN SPECIES	97															NIN (ENSUMAG00000004771) #21	SAV1 (ENSUMAG00000005386) #22	ATL1 (ENSUMAG00000005389) #23	MAP4K5 (ENSUMAG00000005563) #24	CDKL1 (ENSUMAG00000007298) #25	ENSUMAG00000007309	DMAC2L (ENSUMAG00000007314) #26	ENSUMAG00000007316 #27
Giant Panda	MODERN SPECIES	12	ERO1A (ENSAMEG00000005168) #8	GPR137C (ENSAMEG00000005159) #9	TXNDC16 (ENSAMEG00000001980) #10	PTGER2 (ENSAMEG00000001972) #11	PTGDR (ENSAMEG00000001991) #12	NID2 (ENSAMEG00000002001) #13	ENSAMEG00000002083 #14	GNG2 (ENSAMEG00000026480) #15	FRMD6 (ENSAMEG00000002118) #16	TMX1 (ENSAMEG00000015041) #17	ENSAMEG00000024580	TRIM9 (ENSAMEG00000010170) #18	ABHD12B (ENSAMEG00000010063) #20	PYGL (ENSAMEG00000010083) #19	NIN (ENSAMEG00000010002) #21	SAV1 (ENSAMEG00000009991) #22	ATL1 (ENSAMEG00000009965) #23	MAP4K5 (ENSAMEG00000009856) #24	ENSAMEG00000024903	CDKL1 (ENSAMEG00000009840) #25	DMAC2L (ENSAMEG00000009828) #26	L2HGDH (ENSAMEG00000009810) #27	SOS2 (ENSAMEG00000009734) #28	VCPKMT (ENSAMEG00000009724) #29	ARF6 (ENSAMEG00000030588) #30	NEMF (ENSAMEG00000009624) #31	KLHDC2 (ENSAMEG00000009595) #32	KLHDC1 (ENSAMEG00000009591) #33	POLE2 (ENSAMEG00000009547) #34	DNAAF2 (ENSAMEG00000026375) #35	MGAT2 (ENSAMEG00000019401)
Canidae	ANCESTRAL SPECIES	4	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000153201.j.n.i.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Canis_lupus	ANCESTRAL SPECIES	8	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000153201.j.n.i.b	ENSGT00940000157901 #13	ENSGT00390000005163.dc #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Dingo	MODERN SPECIES	161	ERO1A (ENSCAFG00020018783) #8	GPR137C (ENSCAFG00020018811) #9	TXNDC16 (ENSCAFG00020018823) #10	PTGER2 (ENSCAFG00020018884) #11	PTGDR (ENSCAFG00020018888) #12	ENSCAFG00020018915	ENSCAFG00020018927 #13	ENSCAFG00020018932 #14	GNG2 (ENSCAFG00020018934) #15	FRMD6 (ENSCAFG00020018940) #16	TMX1 (ENSCAFG00020019064) #17	TRIM9 (ENSCAFG00020019072) #18	PYGL (ENSCAFG00020019103) #19	ABHD12B (ENSCAFG00020019106) #20	NIN (ENSCAFG00020019187) #21	SAV1 (ENSCAFG00020020078) #22	ATL1 (ENSCAFG00020020080) #23	MAP4K5 (ENSCAFG00020020139) #24	CDKL1 (ENSCAFG00020021749) #25	DMAC2L (ENSCAFG00020021759) #26	L2HGDH (ENSCAFG00020021765) #27	SOS2 (ENSCAFG00020021773) #28	VCPKMT (ENSCAFG00020021818) #29	ARF6 (ENSCAFG00020021820) #30	NEMF (ENSCAFG00020021836) #31	KLHDC2 (ENSCAFG00020021947) #32	KLHDC1 (ENSCAFG00020021956) #33	ENSCAFG00020021970	POLE2 (ENSCAFG00020021974) #34	DNAAF2 (ENSCAFG00020021981) #35	MGAT2 (ENSCAFG00020021983)
Dog	MODERN SPECIES	36	ERO1A (ENSCAFG00845003848) #8	GPR137C (ENSCAFG00845003812) #9	TXNDC16 (ENSCAFG00845003767) #10	PTGER2 (ENSCAFG00845003728) #11	PTGDR (ENSCAFG00845003712) #12	ENSCAFG00845003702	NID2 (ENSCAFG00845003626) #13	RTRAF (ENSCAFG00845003592) #14	GNG2 (ENSCAFG00845003562) #15	FRMD6 (ENSCAFG00845003527) #16	TMX1 (ENSCAFG00845003463) #17	TRIM9 (ENSCAFG00845003422) #18	ABHD12B (ENSCAFG00845003372) #20	PYGL (ENSCAFG00845003315) #19	NIN (ENSCAFG00845003251) #21	SAV1 (ENSCAFG00845003195) #22	ATL1 (ENSCAFG00845003140) #23	MAP4K5 (ENSCAFG00845003041) #24	ENSCAFG00845003013	CDKL1 (ENSCAFG00845002935) #25	DMAC2L (ENSCAFG00845002883) #26	L2HGDH (ENSCAFG00845002841) #27	SOS2 (ENSCAFG00845002710) #28	VCPKMT (ENSCAFG00845002639) #29	ARF6 (ENSCAFG00845002543) #30	NEMF (ENSCAFG00845002470) #31	KLHDC2 (ENSCAFG00845002423) #32	KLHDC1 (ENSCAFG00845002378) #33	POLE2 (ENSCAFG00845002340) #34	DNAAF2 (ENSCAFG00845002292) #35	MGAT2 (ENSCAFG00845002282)
Red fox	MODERN SPECIES	33	ERO1A (ENSVVUG00000029703) #8	GPR137C (ENSVVUG00000029708) #9	TXNDC16 (ENSVVUG00000029711) #10	PTGER2 (ENSVVUG00000029720) #11	PTGDR (ENSVVUG00000029723) #12	ENSVVUG00000029728	NID2 (ENSVVUG00000029733) #13	RTRAF (ENSVVUG00000029735) #14	GNG2 (ENSVVUG00000029739) #15	FRMD6 (ENSVVUG00000029743) #16	TMX1 (ENSVVUG00000029745) #17	TRIM9 (ENSVVUG00000029748) #18	PYGL (ENSVVUG00000029750) #19	ABHD12B (ENSVVUG00000029751) #20	NIN (ENSVVUG00000029764) #21	SAV1 (ENSVVUG00000029789) #22	ATL1 (ENSVVUG00000029790) #23	MAP4K5 (ENSVVUG00000029794) #24	CDKL1 (ENSVVUG00000029800) #25	ENSVVUG00000029801	ATP5S (ENSVVUG00000029802) #26	L2HGDH (ENSVVUG00000029805) #27	SOS2 (ENSVVUG00000029810) #28	VCPKMT (ENSVVUG00000029815) #29	ARF6 (ENSVVUG00000029816) #30	NEMF (ENSVVUG00000029818) #31	KLHDC2 (ENSVVUG00000029826) #32	KLHDC1 (ENSVVUG00000029835) #33	POLE2 (ENSVVUG00000029837) #34	DNAAF2 (ENSVVUG00000029866) #35	MGAT2 (ENSVVUG00000029867)
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT01090000260413	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Chiroptera	ANCESTRAL SPECIES	15	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00530000065161
Microchiroptera	ANCESTRAL SPECIES	19	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29
Microbat	MODERN SPECIES	1241										FRMD6 (ENSMLUG00000015602) #16	TMX1 (ENSMLUG00000005745) #17	TRIM9 (ENSMLUG00000009255) #18	PYGL (ENSMLUG00000014782) #19	ABHD12B (ENSMLUG00000014776) #20	NIN (ENSMLUG00000003310) #21	SAV1 (ENSMLUG00000015946) #22	ATL1 (ENSMLUG00000015934) #23	MAP4K5 (ENSMLUG00000009908) #24	CDKL1 (ENSMLUG00000009848) #25	DMAC2L (ENSMLUG00000009821) #26	L2HGDH (ENSMLUG00000009805) #27	ENSMLUG00000028544	SOS2 (ENSMLUG00000003381) #28	VCPKMT (ENSMLUG00000003379) #29	ENSMLUG00000029326
Greater horseshoe bat	MODERN SPECIES	24	ENSRFEG00010001804 #7	ERO1A (ENSRFEG00010001832) #8	GPR137C (ENSRFEG00010001878) #9	TXNDC16 (ENSRFEG00010001902) #10	PTGER2 (ENSRFEG00010001947) #11	PTGDR (ENSRFEG00010001961) #12	NID2 (ENSRFEG00010001985) #13	ENSRFEG00010002022 #14	GNG2 (ENSRFEG00010002037) #15	FRMD6 (ENSRFEG00010002053) #16	TMX1 (ENSRFEG00010002082) #17	TRIM9 (ENSRFEG00010002151) #18	PYGL (ENSRFEG00010002243) #19	ABHD12B (ENSRFEG00010002326) #20	NIN (ENSRFEG00010002438) #21	SAV1 (ENSRFEG00010002576) #22	ATL1 (ENSRFEG00010002608) #23	MAP4K5 (ENSRFEG00010002683) #24	CDKL1 (ENSRFEG00010002732) #25	ENSRFEG00010002758 #26	L2HGDH (ENSRFEG00010002790) #27	SOS2 (ENSRFEG00010002884) #28	ENSRFEG00010002991	ARF6 (ENSRFEG00010003001) #30	ENSRFEG00010003032	KIF23 (ENSRFEG00010003091)	PAQR5 (ENSRFEG00010003129)	GLCE (ENSRFEG00010003151)	ENSRFEG00010003165	SPESP1 (ENSRFEG00010003175)	ENSRFEG00010003201
Megabat	MODERN SPECIES	2088												TRIM9 (ENSPVAG00000006183) #18	PYGL (ENSPVAG00000006180) #19	ABHD12B (ENSPVAG00000006179) #20	NIN (ENSPVAG00000006178) #21	SAV1 (ENSPVAG00000006177) #22	ATL1 (ENSPVAG00000006176) #23	MAP4K5 (ENSPVAG00000006175) #24	ENSPVAG00000006174 #25	DMAC2L (ENSPVAG00000006173) #26	L2HGDH (ENSPVAG00000006172) #27	SOS2 (ENSPVAG00000006170) #28	VCPKMT (ENSPVAG00000006168) #29	ENSPVAG00000006167
Equus	ANCESTRAL SPECIES	54					ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT01090000260413	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Donkey	MODERN SPECIES	11	ENSEASG00005001212	ENSEASG00005001144	ENSEASG00005028671	ENSEASG00005009739 #11	PTGDR (ENSEASG00005036885) #12	NID2 (ENSEASG00005008428) #13	ENSEASG00005008400 #14	GNG2 (ENSEASG00005027793) #15	ENSEASG00005030621	FRMD6 (ENSEASG00005008349) #16	TMX1 (ENSEASG00005008326) #17	TRIM9 (ENSEASG00005008320) #18	PYGL (ENSEASG00005008316) #19	ABHD12B (ENSEASG00005008311) #20	NIN (ENSEASG00005008300) #21	SAV1 (ENSEASG00005008294) #22	ATL1 (ENSEASG00005008291) #23	MAP4K5 (ENSEASG00005008285) #24	CDKL1 (ENSEASG00005008282) #25	ENSEASG00005008277 #26	ENSEASG00005008276	L2HGDH (ENSEASG00005008274) #27	SOS2 (ENSEASG00005008273) #28	VCPKMT (ENSEASG00005008271) #29	ARF6 (ENSEASG00005030715) #30	NEMF (ENSEASG00005007919) #31	KLHDC2 (ENSEASG00005007878) #32	KLHDC1 (ENSEASG00005007874) #33	POLE2 (ENSEASG00005007848) #34	ENSEASG00005030497 #35	MGAT2 (ENSEASG00005007835)
Horse	MODERN SPECIES				ENSECAG00000057430	ENSECAG00000056243	PTGDR (ENSECAG00000007432) #12	NID2 (ENSECAG00000015369) #13	RTRAF (ENSECAG00000012600) #14	ENSECAG00000044148	ENSECAG00000029588 #15	FRMD6 (ENSECAG00000007999) #16	TMX1 (ENSECAG00000003592) #17	TRIM9 (ENSECAG00000003278) #18	ABHD12B (ENSECAG00000009385) #20	PYGL (ENSECAG00000011728) #19	NIN (ENSECAG00000000578) #21	SAV1 (ENSECAG00000020643) #22	ATL1 (ENSECAG00000008487) #23	MAP4K5 (ENSECAG00000005718) #24	CDKL1 (ENSECAG00000023015) #25	DMAC2L (ENSECAG00000022429) #26	ENSECAG00000005247	L2HGDH (ENSECAG00000020354) #27	SOS2 (ENSECAG00000004420) #28	VCPKMT (ENSECAG00000024379) #29	ARF6 (ENSECAG00000005219) #30	NEMF (ENSECAG00000017376) #31	KLHDC2 (ENSECAG00000009997) #32	KLHDC1 (ENSECAG00000022174) #33	POLE2 (ENSECAG00000013298) #35	MGAT2 (ENSECAG00000005166)	ENSECAG00000032916 #36
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT01090000260413	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Suina	ANCESTRAL SPECIES	30	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00990000213502	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Pig	MODERN SPECIES		ERO1A (ENSSSCG00000005037) #8	GPR137C (ENSSSCG00000005036) #9	TXNDC16 (ENSSSCG00000035934) #10	PTGER2 (ENSSSCG00000021862) #11	PTGDR (ENSSSCG00000057054) #12	NID2 (ENSSSCG00000005030) #13	RTRAF (ENSSSCG00000005029) #14	ENSSSCG00000028092 #15	FRMD6 (ENSSSCG00000005027) #16	TMX1 (ENSSSCG00000038422) #17	ENSSSCG00000046029	TRIM9 (ENSSSCG00000005025) #18	ABHD12B (ENSSSCG00000005023) #20	PYGL (ENSSSCG00000005024) #19	NIN (ENSSSCG00000005022) #21	SAV1 (ENSSSCG00000005021) #22	ATL1 (ENSSSCG00000005020) #23	ENSSSCG00000048049	MAP4K5 (ENSSSCG00000036634) #24	CDKL1 (ENSSSCG00000034516) #25	DMAC2L (ENSSSCG00000031354) #26	L2HGDH (ENSSSCG00000005016) #27	ENSSSCG00000050792	SOS2 (ENSSSCG00000005015) #28	VCPKMT (ENSSSCG00000036735) #29	ARF6 (ENSSSCG00000005012) #30	NEMF (ENSSSCG00000005011) #31	KLHDC2 (ENSSSCG00000005009) #32	KLHDC1 (ENSSSCG00000032489) #33	POLE2 (ENSSSCG00000005008) #34	DNAAF2 (ENSSSCG00000058931) #35
Chacoan peccary	MODERN SPECIES	785	GPR137C (ENSCWAG00000012687) #9	TXNDC16 (ENSCWAG00000012791) #10	PTGER2 (ENSCWAG00000012981) #11	PTGDR (ENSCWAG00000013004) #12	NID2 (ENSCWAG00000013056) #13	RTRAF (ENSCWAG00000013166) #14	ENSCWAG00000013229 #15	ENSCWAG00000013288	FRMD6 (ENSCWAG00000013313) #16	TMX1 (ENSCWAG00000013397) #17	ENSCWAG00000013453	TRIM9 (ENSCWAG00000013480) #18	PYGL (ENSCWAG00000013795) #19	ABHD12B (ENSCWAG00000014007) #20	NIN (ENSCWAG00000014255) #21	SAV1 (ENSCWAG00000014463) #22	ATL1 (ENSCWAG00000014502) #23	MAP4K5 (ENSCWAG00000014542) #24	CDKL1 (ENSCWAG00000014631) #25	DMAC2L (ENSCWAG00000014684) #26	L2HGDH (ENSCWAG00000014752) #27	SOS2 (ENSCWAG00000014880) #28	VCPKMT (ENSCWAG00000015004) #29	ENSCWAG00000015116	ARF6 (ENSCWAG00000015149) #30	NEMF (ENSCWAG00000003697) #31	KLHDC2 (ENSCWAG00000003879) #32	KLHDC1 (ENSCWAG00000003952) #33	POLE2 (ENSCWAG00000003999) #34	DNAAF2 (ENSCWAG00000004295) #35	MGAT2 (ENSCWAG00000004305)
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT01090000260413	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Camelidae	ANCESTRAL SPECIES	8	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Alpaca	MODERN SPECIES	1808										FRMD6 (ENSVPAG00000000753) #16	TMX1 (ENSVPAG00000000752) #17	TRIM9 (ENSVPAG00000000750) #18	PYGL (ENSVPAG00000000747) #19	ABHD12B (ENSVPAG00000000744) #20	NIN (ENSVPAG00000000739) #21	SAV1 (ENSVPAG00000000737) #22	ATL1 (ENSVPAG00000000734) #23	MAP4K5 (ENSVPAG00000000731) #24	ENSVPAG00000000729 #26	L2HGDH (ENSVPAG00000000727) #27	SOS2 (ENSVPAG00000000725) #28	VCPKMT (ENSVPAG00000000722) #29	ENSVPAG00000000707
Arabian camel	MODERN SPECIES	32	PSMC6 (ENSCDRG00005001579) #7	ERO1A (ENSCDRG00005001546) #8	GPR137C (ENSCDRG00005001479) #9	TXNDC16 (ENSCDRG00005001432) #10	PTGER2 (ENSCDRG00005001414) #11	PTGDR (ENSCDRG00005001403) #12	NID2 (ENSCDRG00005001348) #13	RTRAF (ENSCDRG00005001320) #14	GNG2 (ENSCDRG00005001299) #15	FRMD6 (ENSCDRG00005001276) #16	TMX1 (ENSCDRG00005001254) #17	TRIM9 (ENSCDRG00005001227) #18	ABHD12B (ENSCDRG00005001188) #20	PYGL (ENSCDRG00005001053) #19	NIN (ENSCDRG00005000903) #21	SAV1 (ENSCDRG00005000823) #22	ATL1 (ENSCDRG00005000779) #23	MAP4K5 (ENSCDRG00005000725) #24	CDKL1 (ENSCDRG00005000667) #25	DMAC2L (ENSCDRG00005000628) #26	L2HGDH (ENSCDRG00005000598) #27	SOS2 (ENSCDRG00005000487) #28	VCPKMT (ENSCDRG00005000447) #29	ARF6 (ENSCDRG00005000426) #30	NEMF (ENSCDRG00005000306) #31	KLHDC2 (ENSCDRG00005000239) #32	KLHDC1 (ENSCDRG00005000150) #33	POLE2 (ENSCDRG00005000080) #34	DNAAF2 (ENSCDRG00005000047) #35	MGAT2 (ENSCDRG00005000038)	RPL36AL (ENSCDRG00005020216) #36
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT01090000260413	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Cetacea	ANCESTRAL SPECIES	2	ENSGT00940000153986.a #9	ENSGT00940000154563.m.a	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT01010000228734	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT01090000260413	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00940000153986.a #9	ENSGT00940000154563.m.a	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT01010000228734	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00940000154563.m.a	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT01010000228734	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597.a #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Dolphin	MODERN SPECIES	2979															NIN (ENSTTRG00000009568) #21	SAV1 (ENSTTRG00000009567) #22	ATL1 (ENSTTRG00000009566) #23	MAP4K5 (ENSTTRG00000009565) #24	DMAC2L (ENSTTRG00000009564) #26	L2HGDH (ENSTTRG00000009563) #27
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00940000154563.m.a	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT01010000228734	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597.a #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Vaquita	MODERN SPECIES	11	TXNDC16 (ENSPSNG00000017614) #10	ENSPSNG00000017582	PTGER2 (ENSPSNG00000017549) #11	PTGDR (ENSPSNG00000017508) #12	ENSPSNG00000017459	NID2 (ENSPSNG00000017331) #13	RTRAF (ENSPSNG00000017269) #14	GNG2 (ENSPSNG00000017215) #15	FRMD6 (ENSPSNG00000017133) #16	TMX1 (ENSPSNG00000017080) #17	ENSPSNG00000016999	TRIM9 (ENSPSNG00000016917) #18	ENSPSNG00000016687 #20	PYGL (ENSPSNG00000016529) #19	NIN (ENSPSNG00000016131) #21	SAV1 (ENSPSNG00000016010) #22	ATL1 (ENSPSNG00000015894) #23	MAP4K5 (ENSPSNG00000015487) #24	CDKL1 (ENSPSNG00000015390) #25	DMAC2L (ENSPSNG00000015252) #26	L2HGDH (ENSPSNG00000014943) #27	SOS2 (ENSPSNG00000014809) #28	VCPKMT (ENSPSNG00000014707) #29	ENSPSNG00000014645	ARF6 (ENSPSNG00000014599) #30	NEMF (ENSPSNG00000014455) #31	KLHDC2 (ENSPSNG00000014341) #32	KLHDC1 (ENSPSNG00000014247) #33	POLE2 (ENSPSNG00000014074) #34	DNAAF2 (ENSPSNG00000013973) #35	MGAT2 (ENSPSNG00000013944)
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01010000229621	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT01010000228734	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597.a #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Beluga whale	MODERN SPECIES	44	PTGER2 (ENSDLEG00000007415) #11	PTGDR (ENSDLEG00000007421) #12	ENSDLEG00000007427	ENSDLEG00000007463	NID2 (ENSDLEG00000007498) #13	RTRAF (ENSDLEG00000007540) #14	ENSDLEG00000007563	ENSDLEG00000007567 #15	FRMD6 (ENSDLEG00000007569) #16	TMX1 (ENSDLEG00000007582) #17	ENSDLEG00000007591	TRIM9 (ENSDLEG00000007605) #18	PYGL (ENSDLEG00000007635) #19	ABHD12B (ENSDLEG00000007653) #20	NIN (ENSDLEG00000007666) #21	SAV1 (ENSDLEG00000009823) #22	ATL1 (ENSDLEG00000009841) #23	MAP4K5 (ENSDLEG00000009907) #24	CDKL1 (ENSDLEG00000009991) #25	ATP5S (ENSDLEG00000010048) #26	L2HGDH (ENSDLEG00000010068) #27	SOS2 (ENSDLEG00000010181) #28	VCPKMT (ENSDLEG00000010678) #29	ENSDLEG00000010695 #30	NEMF (ENSDLEG00000010733) #31	KLHDC2 (ENSDLEG00000010929) #32	KLHDC1 (ENSDLEG00000010967) #33	ENSDLEG00000010993	DNAAF2 (ENSDLEG00000011002) #35	MGAT2 (ENSDLEG00000011008)	RPL36AL (ENSDLEG00000011016)
Narwhal	MODERN SPECIES	308	TXNDC16 (ENSMMNG00015016211) #10	PTGER2 (ENSMMNG00015016185) #11	PTGDR (ENSMMNG00015016170) #12	ENSMMNG00015016159	NID2 (ENSMMNG00015016073) #13	RTRAF (ENSMMNG00015016022) #14	ENSMMNG00015016002	GNG2 (ENSMMNG00015015968) #15	FRMD6 (ENSMMNG00015015932) #16	TMX1 (ENSMMNG00015015875) #17	ENSMMNG00015015846	TRIM9 (ENSMMNG00015015769) #18	ENSMMNG00015015718 #20	PYGL (ENSMMNG00015015651) #19	NIN (ENSMMNG00015015498) #21	SAV1 (ENSMMNG00015015431) #22	ATL1 (ENSMMNG00015015403) #23	MAP4K5 (ENSMMNG00015015347) #24	CDKL1 (ENSMMNG00015015315) #25	DMAC2L (ENSMMNG00015015288) #26	L2HGDH (ENSMMNG00015015232) #27	SOS2 (ENSMMNG00015015168) #28	VCPKMT (ENSMMNG00015015112) #29	ENSMMNG00015015096	ENSMMNG00015015085	ARF6 (ENSMMNG00015015073) #30	ENSMMNG00015015051	NEMF (ENSMMNG00015015008) #31	KLHDC2 (ENSMMNG00015014971) #32	KLHDC1 (ENSMMNG00015014948) #33	POLE2 (ENSMMNG00015014865) #34
Sperm whale	MODERN SPECIES	2	ENSPCTG00005022221	ENSPCTG00005022192	TXNDC16 (ENSPCTG00005022037) #10	PTGER2 (ENSPCTG00005021953) #11	PTGDR (ENSPCTG00005021874) #12	NID2 (ENSPCTG00005021220) #13	RTRAF (ENSPCTG00005020937) #14	ENSPCTG00005020822 #15	FRMD6 (ENSPCTG00005020555) #16	TMX1 (ENSPCTG00005020230) #17	ENSPCTG00005020059	TRIM9 (ENSPCTG00005019583) #18	ENSPCTG00005019365 #19	ABHD12B (ENSPCTG00005019096) #20	NIN (ENSPCTG00005015589) #21	SAV1 (ENSPCTG00005014343) #22	ATL1 (ENSPCTG00005014069) #23	MAP4K5 (ENSPCTG00005012914) #24	CDKL1 (ENSPCTG00005012442) #25	DMAC2L (ENSPCTG00005011981) #26	L2HGDH (ENSPCTG00005011546) #27	SOS2 (ENSPCTG00005011239) #28	VCPKMT (ENSPCTG00005010868) #29	ENSPCTG00005010574	NEMF (ENSPCTG00005009974) #31	KLHDC2 (ENSPCTG00005009495) #32	KLHDC1 (ENSPCTG00005009005) #33	POLE2 (ENSPCTG00005008659) #34	DNAAF2 (ENSPCTG00005008238) #35	MGAT2 (ENSPCTG00005008112)	RPL36AL (ENSPCTG00005008036) #36
Blue whale	MODERN SPECIES	11	ENSBMSG00010005135	TXNDC16 (ENSBMSG00010005111) #10	PTGER2 (ENSBMSG00010005087) #11	PTGDR (ENSBMSG00010005665) #12	ENSBMSG00010005641	ENSBMSG00010005619	NID2 (ENSBMSG00010005533) #13	RTRAF (ENSBMSG00010005489) #14	GNG2 (ENSBMSG00010005461) #15	FRMD6 (ENSBMSG00010005417) #16	TMX1 (ENSBMSG00010005352) #17	ENSBMSG00010005333	TRIM9 (ENSBMSG00010005267) #18	PYGL (ENSBMSG00010005107) #19	NIN (ENSBMSG00010004695) #21	SAV1 (ENSBMSG00010004334) #22	ATL1 (ENSBMSG00010004299) #23	MAP4K5 (ENSBMSG00010004241) #24	CDKL1 (ENSBMSG00010004194) #25	DMAC2L (ENSBMSG00010004144) #26	ENSBMSG00010004115	L2HGDH (ENSBMSG00010004093) #27	SOS2 (ENSBMSG00010004018) #28	VCPKMT (ENSBMSG00010003933) #29	NEMF (ENSBMSG00010003828) #31	KLHDC2 (ENSBMSG00010003726) #32	KLHDC1 (ENSBMSG00010003665) #33	POLE2 (ENSBMSG00010003567) #34	DNAAF2 (ENSBMSG00010003488) #35	MGAT2 (ENSBMSG00010003463)	ENSBMSG00010003452 #36
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000158086	ENSGT00530000063561	ENSGT00530000063760.a	ENSGT01050000244902.b.c.b #12	ENSGT00390000000628.m.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Yarkand deer	MODERN SPECIES	3	OAZ2 (ENSCHYG00000005167)	RBPMS2 (ENSCHYG00000005045)	PIF1 (ENSCHYG00000005000)	PLEKHO2 (ENSCHYG00000004921)	PTGDR (ENSCHYG00000025706) #12	ENSCHYG00000025691	NID2 (ENSCHYG00000025307) #13	ENSCHYG00000025262 #14	GNG2 (ENSCHYG00000025234) #15	FRMD6 (ENSCHYG00000025157) #16	ENSCHYG00000025123 #17	TRIM9 (ENSCHYG00000025003) #18	ABHD12B (ENSCHYG00000024914) #20	PYGL (ENSCHYG00000024759) #19	NIN (ENSCHYG00000024320) #21	SAV1 (ENSCHYG00000024265) #22	ATL1 (ENSCHYG00000024113) #23	MAP4K5 (ENSCHYG00000023796) #24	CDKL1 (ENSCHYG00000023705) #25	DMAC2L (ENSCHYG00000023617) #26	L2HGDH (ENSCHYG00000023388) #27	ENSCHYG00000023369	SOS2 (ENSCHYG00000022880) #28	VCPKMT (ENSCHYG00000022716) #29	ARF6 (ENSCHYG00000022680) #30	NEMF (ENSCHYG00000022447) #31	KLHDC2 (ENSCHYG00000022046) #32	KLHDC1 (ENSCHYG00000021746) #33	POLE2 (ENSCHYG00000021571) #34	DNAAF2 (ENSCHYG00000021512) #35	ENSCHYG00000021495
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000158086	ENSGT00530000063561	ENSGT00530000063760.a	ENSGT01050000244902.b.c.b #12	ENSGT00390000000628.m.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000158086	ENSGT00530000063561	ENSGT00530000063760.a	ENSGT01050000244902.b.c.b #12	ENSGT00390000000628.m.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Caprinae	ANCESTRAL SPECIES	11	ENSGT00860000136093	ENSGT00940000157725	ENSGT00940000158086	ENSGT00530000063561	ENSGT00530000063760.a	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959.g #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072.e #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Goat	MODERN SPECIES	1	OAZ2 (ENSCHIG00000012878)	RBPMS2 (ENSCHIG00000024439)	PIF1 (ENSCHIG00000014856)	PLEKHO2 (ENSCHIG00000025653)	PTGDR (ENSCHIG00000025921) #12	NID2 (ENSCHIG00000018670) #13	RTRAF (ENSCHIG00000018490) #14	GNG2 (ENSCHIG00000010532) #15	ENSCHIG00000007229	FRMD6 (ENSCHIG00000016383) #16	ENSCHIG00000018735 #17	TRIM9 (ENSCHIG00000017718) #18	PYGL (ENSCHIG00000026825) #19	ABHD12B (ENSCHIG00000023966) #20	NIN (ENSCHIG00000024159) #21	SAV1 (ENSCHIG00000012803) #22	ATL1 (ENSCHIG00000026021) #23	MAP4K5 (ENSCHIG00000017130) #24	CDKL1 (ENSCHIG00000008627) #25	DMAC2L (ENSCHIG00000023027) #26	L2HGDH (ENSCHIG00000021620) #27	SOS2 (ENSCHIG00000025588) #28	VCPKMT (ENSCHIG00000012137) #29	ENSCHIG00000008760 #30	NEMF (ENSCHIG00000026761) #31	KLHDC2 (ENSCHIG00000016568) #32	KLHDC1 (ENSCHIG00000016228) #33	POLE2 (ENSCHIG00000023859) #34	DNAAF2 (ENSCHIG00000016942) #35	MGAT2 (ENSCHIG00000010952)	ENSCHIG00000011261
Rambouillet Sheep	MODERN SPECIES	23	POLE2 (ENSOARG00020020524) #34	KLHDC1 (ENSOARG00020021073) #33	KLHDC2 (ENSOARG00020021157) #32	NEMF (ENSOARG00020021333) #31	ARF6 (ENSOARG00020021666) #30	VCPKMT (ENSOARG00020021706) #29	SOS2 (ENSOARG00020021878) #28	L2HGDH (ENSOARG00020022135) #27	DMAC2L (ENSOARG00020022235) #26	CDKL1 (ENSOARG00020022279) #25	MAP4K5 (ENSOARG00020022416) #24	TRIM9 (ENSOARG00020022559) #18	PYGL (ENSOARG00020022835) #19	ABHD12B (ENSOARG00020023110) #20	NIN (ENSOARG00020023168) #21	SAV1 (ENSOARG00020023231) #22	ATL1 (ENSOARG00020023261) #23	ENSOARG00020023429 #17	FRMD6 (ENSOARG00020023456) #16	GNG2 (ENSOARG00020023501) #15	RTRAF (ENSOARG00020023533) #14	NID2 (ENSOARG00020023556) #13	ENSOARG00020023613	ENSOARG00020023633	ENSOARG00020023643	PTGDR (ENSOARG00020023654) #12	PLEKHO2 (ENSOARG00020023668)	PIF1 (ENSOARG00020023726)	RBPMS2 (ENSOARG00020023782)	OAZ2 (ENSOARG00020023813)	ZNF609 (ENSOARG00020023856)
Bovinae	ANCESTRAL SPECIES	11	ENSGT00940000158086	ENSGT00530000063561	ENSGT00530000063760.a	ENSGT01050000244902.b.c.b #12	ENSGT00390000000628.m.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00960000190512	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Bos	ANCESTRAL SPECIES	13	ENSGT00530000063561	ENSGT00530000063760.a	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.b.b.a.b.b.a.a	ENSGT01050000244902.b.c.b #12	ENSGT00390000000628.m.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00960000190512	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Bos_b	ANCESTRAL SPECIES	11	ENSGT00530000063561	ENSGT00530000063760.a	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.b.b.a.b.b.a.a	ENSGT01050000244902.b.c.b #12	ENSGT00390000000628.m.b	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00960000190512	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Hybrid Bos Indicus	MODERN SPECIES	1	ENSBIXG00005022962	ENSBIXG00005003921	ENSBIXG00005023011	ENSBIXG00005023024	NID2 (ENSBIXG00005023094) #13	RTRAF (ENSBIXG00005023121) #14	GNG2 (ENSBIXG00005006471) #15	FRMD6 (ENSBIXG00005003969) #16	TMX1 (ENSBIXG00005023289) #17	ENSBIXG00005003985	TRIM9 (ENSBIXG00005023384) #18	ENSBIXG00005023430	ABHD12B (ENSBIXG00005006280) #20	PYGL (ENSBIXG00005023570) #19	NIN (ENSBIXG00005023848) #21	SAV1 (ENSBIXG00005004102) #22	ATL1 (ENSBIXG00005023977) #23	ENSBIXG00005023993	MAP4K5 (ENSBIXG00005024085) #24	CDKL1 (ENSBIXG00005004128) #25	DMAC2L (ENSBIXG00005004131) #26	L2HGDH (ENSBIXG00005024233) #27	SOS2 (ENSBIXG00005004150) #28	VCPKMT (ENSBIXG00005024347) #29	ARF6 (ENSBIXG00005024374) #30	NEMF (ENSBIXG00005024651) #31	KLHDC2 (ENSBIXG00005024756) #32	KLHDC1 (ENSBIXG00005007705) #33	POLE2 (ENSBIXG00005025043) #34	DNAAF2 (ENSBIXG00005025065) #35	MGAT2 (ENSBIXG00005025088)
Cow	MODERN SPECIES	1	PLEKHO2 (ENSBTAG00000008411)	PTGDR (ENSBTAG00000006703) #12	ENSBTAG00000001423	NID2 (ENSBTAG00000021945) #13	RTRAF (ENSBTAG00000021944) #14	GNG2 (ENSBTAG00000003043) #15	FRMD6 (ENSBTAG00000031707) #16	TMX1 (ENSBTAG00000011225) #17	ENSBTAG00000053552	TRIM9 (ENSBTAG00000010103) #18	ENSBTAG00000048395	PYGL (ENSBTAG00000011494) #19	ABHD12B (ENSBTAG00000044049) #20	NIN (ENSBTAG00000020281) #21	ENSBTAG00000054530	SAV1 (ENSBTAG00000001539) #22	ATL1 (ENSBTAG00000014312) #23	MAP4K5 (ENSBTAG00000014792) #24	CDKL1 (ENSBTAG00000004780) #25	DMAC2L (ENSBTAG00000015202) #26	L2HGDH (ENSBTAG00000015200) #27	SOS2 (ENSBTAG00000005550) #28	VCPKMT (ENSBTAG00000005547) #29	ARF6 (ENSBTAG00000045980) #30	NEMF (ENSBTAG00000004934) #31	KLHDC2 (ENSBTAG00000004933) #32	KLHDC1 (ENSBTAG00000031697) #33	POLE2 (ENSBTAG00000004931) #34	DNAAF2 (ENSBTAG00000004930) #35	MGAT2 (ENSBTAG00000033891)	RPL36AL (ENSBTAG00000025564)
Bos_a	ANCESTRAL SPECIES	53	ENSGT00530000063760.a	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.b.b.a.b.b.a.a	ENSGT01050000244902.b.c.b #12	ENSGT00390000000628.m.b	ENSGT01100000263481.n.a.b.b.a.b.b.b.a.b.a.a	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00960000190512	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Domestic yak	MODERN SPECIES	2	ENSBGRG00000022958	ENSBGRG00000022925	ENSBGRG00000022900	ENSBGRG00000022887	ENSBGRG00000022878	ENSBGRG00000022839 #13	RTRAF (ENSBGRG00000022794) #14	GNG2 (ENSBGRG00000022753) #15	FRMD6 (ENSBGRG00000022716) #16	ENSBGRG00000022657 #17	TRIM9 (ENSBGRG00000022417) #18	ENSBGRG00000022381	ABHD12B (ENSBGRG00000022182) #20	PYGL (ENSBGRG00000021692) #19	NIN (ENSBGRG00000019999) #21	SAV1 (ENSBGRG00000019862) #22	ATL1 (ENSBGRG00000019574) #23	MAP4K5 (ENSBGRG00000019193) #24	CDKL1 (ENSBGRG00000019004) #25	DMAC2L (ENSBGRG00000018944) #26	L2HGDH (ENSBGRG00000018807) #27	SOS2 (ENSBGRG00000018125) #28	VCPKMT (ENSBGRG00000017893) #29	ARF6 (ENSBGRG00000017840) #30	NEMF (ENSBGRG00000017281) #31	KLHDC2 (ENSBGRG00000016910) #32	KLHDC1 (ENSBGRG00000016768) #33	POLE2 (ENSBGRG00000016044) #34	DNAAF2 (ENSBGRG00000015937) #35	MGAT2 (ENSBGRG00000015912)	RPL36AL (ENSBGRG00000015893) #36
Wild yak	MODERN SPECIES	658	PLEKHO2 (ENSBMUG00000004851)	PTGDR (ENSBMUG00000004918) #12	ENSBMUG00000004942	ENSBMUG00000004970	NID2 (ENSBMUG00000005047) #13	ENSBMUG00000005089	RTRAF (ENSBMUG00000005104) #14	GNG2 (ENSBMUG00000005127) #15	FRMD6 (ENSBMUG00000005269) #16	TMX1 (ENSBMUG00000005288) #17	TRIM9 (ENSBMUG00000005310) #18	ENSBMUG00000005323	PYGL (ENSBMUG00000005378) #19	ABHD12B (ENSBMUG00000005417) #20	NIN (ENSBMUG00000006386) #21	SAV1 (ENSBMUG00000008791) #22
American bison	MODERN SPECIES	3096				ENSBBBG00000015025	NID2 (ENSBBBG00000015045) #13	RTRAF (ENSBBBG00000015063) #14	GNG2 (ENSBBBG00000015079) #15	ENSBBBG00000003741	FRMD6 (ENSBBBG00000015146) #16	ENSBBBG00000015156 #17	TRIM9 (ENSBBBG00000015157) #18	ENSBBBG00000003547	PYGL (ENSBBBG00000015189) #19	ABHD12B (ENSBBBG00000015231) #20	NIN (ENSBBBG00000003493) #21	SAV1 (ENSBBBG00000015341) #22	ATL1 (ENSBBBG00000003834) #23	MAP4K5 (ENSBBBG00000003841) #24	CDKL1 (ENSBBBG00000015419) #25	DMAC2L (ENSBBBG00000015446) #26	L2HGDH (ENSBBBG00000015468) #27	SOS2 (ENSBBBG00000015540) #28	VCPKMT (ENSBBBG00000003876) #29	ARF6 (ENSBBBG00000000787) #30	NEMF (ENSBBBG00000003891) #31	KLHDC2 (ENSBBBG00000015634) #32	KLHDC1 (ENSBBBG00000015649) #33	POLE2 (ENSBBBG00000008293) #34	ENSBBBG00000003925 #35	RPL36AL (ENSBBBG00000015732) #36	MGAT2 (ENSBBBG00000015739)
Siberian musk deer	MODERN SPECIES	367	PLEKHO2 (ENSMMSG00000015873)	ENSMMSG00000015854	ENSMMSG00000015839	PTGDR (ENSMMSG00000015794) #12	ENSMMSG00000015763	ENSMMSG00000015752	NID2 (ENSMMSG00000015694) #13	ENSMMSG00000015674 #14	GNG2 (ENSMMSG00000015632) #15	FRMD6 (ENSMMSG00000015570) #16	TMX1 (ENSMMSG00000015541) #17	TRIM9 (ENSMMSG00000015468) #18	ABHD12B (ENSMMSG00000015404) #20	PYGL (ENSMMSG00000015265) #19	NIN (ENSMMSG00000014951) #21	SAV1 (ENSMMSG00000014902) #22	ATL1 (ENSMMSG00000014871) #23	MAP4K5 (ENSMMSG00000014820) #24	CDKL1 (ENSMMSG00000014797) #25	DMAC2L (ENSMMSG00000014785) #26	L2HGDH (ENSMMSG00000014759) #27	SOS2 (ENSMMSG00000014665) #28	VCPKMT (ENSMMSG00000011959) #29	ARF6 (ENSMMSG00000011947) #30	NEMF (ENSMMSG00000011746) #31	KLHDC2 (ENSMMSG00000011673) #32	KLHDC1 (ENSMMSG00000011642) #33	ENSMMSG00000011631	POLE2 (ENSMMSG00000011159) #34	DNAAF2 (ENSMMSG00000011094) #35	MGAT2 (ENSMMSG00000011086)
Eulipotyphla	ANCESTRAL SPECIES	473															ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23
Common shrew	MODERN SPECIES	6578															NIN (ENSSARG00000002273) #21	SAV1 (ENSSARG00000002261) #22	ATL1 (ENSSARG00000002162) #23
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Glires	ANCESTRAL SPECIES	12	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Rodentia	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b.b.b
Rodentia_B	ANCESTRAL SPECIES	7	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b.b.b
Myomorpha	ANCESTRAL SPECIES	7	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162	ENSGT00510000048466 #35	ENSGT00390000007341.a
Muroidea	ANCESTRAL SPECIES	54										ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162	ENSGT00510000048466 #35	ENSGT00390000007341.a
Muroidea_A	ANCESTRAL SPECIES	15	ENSGT00950000182998.A	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT00550000074912	ENSGT00910000144250	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162	ENSGT00510000048466 #35	ENSGT00390000007341.a
Cricetidae	ANCESTRAL SPECIES	17	ENSGT00950000182998.A	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT00550000074912	ENSGT00910000144250.cb	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00970000194423	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162	ENSGT00510000048466 #35
Cricetinae	ANCESTRAL SPECIES	11	ENSGT00950000182998.A	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT00550000074912	ENSGT00910000144250.cb	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00970000194423	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00900000143162
Golden Hamster	MODERN SPECIES	652	Ccdc175 (ENSMAUG00000012981)	Jkamp (ENSMAUG00000013918)	L3hypdh (ENSMAUG00000008290)	Daam1 (ENSMAUG00000003647)	Dact1 (ENSMAUG00000008693)	Tomm20l (ENSMAUG00000007310)	Arid4a (ENSMAUG00000016160)	Psma3 (ENSMAUG00000020737)	ENSMAUG00000016337	Frmd6 (ENSMAUG00000015963) #16	Tmx1 (ENSMAUG00000011486) #17	ENSMAUG00000008858	Trim9 (ENSMAUG00000018818) #18	Pygl (ENSMAUG00000012424) #19	Abhd12b (ENSMAUG00000011642) #20	Sav1 (ENSMAUG00000018575) #22	Atl1 (ENSMAUG00000016977) #23	Map4k5 (ENSMAUG00000020655) #24	Cdkl1 (ENSMAUG00000020825) #25	Dmac2l (ENSMAUG00000020577) #26	L2hgdh (ENSMAUG00000015336) #27	Sos2 (ENSMAUG00000013147) #28	Vcpkmt (ENSMAUG00000001299) #29	ENSMAUG00000000792	ENSMAUG00000009106 #31	Klhdc2 (ENSMAUG00000012014) #32	Pole2 (ENSMAUG00000001075) #34	Dnaaf2 (ENSMAUG00000014305) #35	ENSMAUG00000007273	Mgat2 (ENSMAUG00000009453)	ENSMAUG00000016113
Chinese hamster chok1gshd	MODERN SPECIES	2	ENSCGRG00001009458	Dact1 (ENSCGRG00001013082)	2700049A03Rik (ENSCGRG00001014970)	Timm9 (ENSCGRG00001006577)	Tomm20l (ENSCGRG00001017252)	Arid4a (ENSCGRG00001018168)	Psma3 (ENSCGRG00001020109)	Actr10 (ENSCGRG00001021929)	Frmd6 (ENSCGRG00001014895) #16	Tmx1 (ENSCGRG00001017821) #17	ENSCGRG00001000492	Trim9 (ENSCGRG00001003585) #18	Pygl (ENSCGRG00001020410) #19	Abhd12b (ENSCGRG00001017992) #20	Nin (ENSCGRG00001020642) #21	Sav1 (ENSCGRG00001014937) #22	Atl1 (ENSCGRG00001015789) #23	ENSCGRG00001017162 #24	Cdkl1 (ENSCGRG00001019887) #25	Dmac2l (ENSCGRG00001021790) #26	L2hgdh (ENSCGRG00001023345) #27	Sos2 (ENSCGRG00001012314) #28	ENSCGRG00001009974	Vcpkmt (ENSCGRG00001023926) #29	Arf6 (ENSCGRG00001010290) #30	ENSCGRG00001002262	Nemf (ENSCGRG00001017898) #31	Klhdc2 (ENSCGRG00001019467) #32	Klhdc1 (ENSCGRG00001020229) #33	Pole2 (ENSCGRG00001011322) #34	Dnaaf2 (ENSCGRG00001013061) #35
Cricetidae_B	ANCESTRAL SPECIES	18	ENSGT00950000182998.A	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT00550000074912	ENSGT00910000144250.cb	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00970000194423	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162	ENSGT00510000048466 #35
Northern American deer mouse	MODERN SPECIES	5	Mia2 (ENSPEMG00000009691)	Fbxo33 (ENSPEMG00000007070)	ENSPEMG00000031398	ENSPEMG00000031040	ENSPEMG00000013551	Lrfn5 (ENSPEMG00000022367)	ENSPEMG00000026831	ENSPEMG00000029446	ENSPEMG00000015129	Frmd6 (ENSPEMG00000020767) #16	Tmx1 (ENSPEMG00000020440) #17	Trim9 (ENSPEMG00000021633) #18	Pygl (ENSPEMG00000022037) #19	Abhd12b (ENSPEMG00000020611) #20	Nin (ENSPEMG00000020865) #21	Sav1 (ENSPEMG00000022702) #22	Atl1 (ENSPEMG00000022136) #23	Map4k5 (ENSPEMG00000016155) #24	Cdkl1 (ENSPEMG00000011830) #25	Dmac2l (ENSPEMG00000020580) #26	L2hgdh (ENSPEMG00000017428) #27	Sos2 (ENSPEMG00000018079) #28	Vcpkmt (ENSPEMG00000011230) #29	Arf6 (ENSPEMG00000024869) #30	Nemf (ENSPEMG00000026713) #31	Klhdc2 (ENSPEMG00000000018) #32	Klhdc1 (ENSPEMG00000001943) #33	Pole2 (ENSPEMG00000015042) #34	Dnaaf2 (ENSPEMG00000011084) #35	Mgat2 (ENSPEMG00000000956)	ENSPEMG00000028168
Prairie vole	MODERN SPECIES		L3hypdh (ENSMOCG00000022649)	Jkamp (ENSMOCG00000022061)	Ccdc175 (ENSMOCG00000018926)	ENSMOCG00000017923	Lrrc9 (ENSMOCG00000017244)	Pcnx4 (ENSMOCG00000007196)	Gm4756 (ENSMOCG00000021237)	Dhrs7 (ENSMOCG00000017844)	ENSMOCG00000013291	ENSMOCG00000000739	ENSMOCG00000008746	Six6 (ENSMOCG00000001167)	Six1 (ENSMOCG00000000863)	Six4 (ENSMOCG00000022987)	Nin (ENSMOCG00000006127) #21	Sav1 (ENSMOCG00000014156) #22	Atl1 (ENSMOCG00000008819) #23	Map4k5 (ENSMOCG00000012415) #24	Cdkl1 (ENSMOCG00000001925) #25	Dmac2l (ENSMOCG00000018826) #26	L2hgdh (ENSMOCG00000013172) #27	Sos2 (ENSMOCG00000022743) #28	Vcpkmt (ENSMOCG00000016386) #29	Arf6 (ENSMOCG00000016767) #30	ENSMOCG00000015415	Nemf (ENSMOCG00000009325) #31	Klhdc2 (ENSMOCG00000004420) #32	Klhdc1 (ENSMOCG00000020719) #33	Pole2 (ENSMOCG00000012838) #34	ENSMOCG00000007212	Dnaaf2 (ENSMOCG00000005708) #35
Murinae	ANCESTRAL SPECIES	8	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT01050000248157	ENSGT00550000074912	ENSGT00910000144250	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162	ENSGT00510000048466 #35	ENSGT00390000007341.a
Mus	ANCESTRAL SPECIES	10	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT01050000248157	ENSGT00550000074912	ENSGT00910000144250	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00970000194876	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162	ENSGT00510000048466 #35
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT01050000248157	ENSGT00550000074912	ENSGT00910000144250	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000153556.A.g.b	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00970000194876	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT01050000248157	ENSGT00550000074912	ENSGT00910000144250	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000153556.A.g.b	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421.g #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00970000194876	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162
Mouse	MODERN SPECIES	3	Gpr135 (ENSMUSG00000043398)	Daam1 (ENSMUSG00000034574)	Dact1 (ENSMUSG00000044548)	2700049A03Rik (ENSMUSG00000034601)	Timm9 (ENSMUSG00000021079)	Tomm20l (ENSMUSG00000021078)	Arid4a (ENSMUSG00000048118)	Psma3 (ENSMUSG00000060073)	Actr10 (ENSMUSG00000021076)	Frmd6 (ENSMUSG00000048285) #16	Tmx1 (ENSMUSG00000021072) #17	Trim9 (ENSMUSG00000021071) #18	Pygl (ENSMUSG00000021069) #19	Abhd12b (ENSMUSG00000090121) #20	Nin (ENSMUSG00000021068) #21	Sav1 (ENSMUSG00000021067) #22	Atl1 (ENSMUSG00000021066) #23	Map4k5 (ENSMUSG00000034761) #24	Cdkl1 (ENSMUSG00000020990) #25	Dmac2l (ENSMUSG00000054894) #26	L2hgdh (ENSMUSG00000020988) #27	Sos2 (ENSMUSG00000034801) #28	Vcpkmt (ENSMUSG00000049882) #29	Arf6 (ENSMUSG00000044147) #30	Nemf (ENSMUSG00000020982) #31	Klhdc2 (ENSMUSG00000020978) #32	Klhdc1 (ENSMUSG00000051890) #33	Pole2 (ENSMUSG00000020974) #34	Dnaaf2 (ENSMUSG00000020973) #35	Mgat2 (ENSMUSG00000043998)	Gm49383 (ENSMUSG00000113149)
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000156452	ENSGT00950000183181.B.a	ENSGT00390000012397	ENSGT00940000160102	ENSGT00390000011698.c.b	ENSGT00940000156159	ENSGT01050000248157	ENSGT00550000074912	ENSGT00910000144250	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000153556.A.g.b	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421.g #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00970000194876	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00900000143162
Steppe mouse	MODERN SPECIES	3136									ENSMSIG00000029303 #16	Tmx1 (ENSMSIG00000029286) #17	Trim9 (ENSMSIG00000029099) #18	Pygl (ENSMSIG00000029075) #19	Abhd12b (ENSMSIG00000029052) #20	Nin (ENSMSIG00000028959) #21	ENSMSIG00000028951	Sav1 (ENSMSIG00000028944) #22	Atl1 (ENSMSIG00000028917) #23	Map4k5 (ENSMSIG00000028803) #24	ENSMSIG00000028800	Cdkl1 (ENSMSIG00000028792) #25	Dmac2l (ENSMSIG00000028784) #26	L2hgdh (ENSMSIG00000028773) #27	Sos2 (ENSMSIG00000028726) #28	Vcpkmt (ENSMSIG00000028718) #29	ENSMSIG00000028714	Arf6 (ENSMSIG00000028712) #30	Nemf (ENSMSIG00000028656) #31	Klhdc2 (ENSMSIG00000028652) #32	Klhdc1 (ENSMSIG00000028633) #33	Pole2 (ENSMSIG00000028607) #34	Dnaaf2 (ENSMSIG00000028604) #35
spretus	MODERN SPECIES	3	Gpr135 (MGP_SPRETEiJ_G0018675)	Daam1 (MGP_SPRETEiJ_G0018674)	Dact1 (MGP_SPRETEiJ_G0018673)	2700049A03Rik (MGP_SPRETEiJ_G0018672)	Timm9 (MGP_SPRETEiJ_G0018671)	Tomm20l (MGP_SPRETEiJ_G0018670)	Arid4a (MGP_SPRETEiJ_G0018669)	Psma3 (MGP_SPRETEiJ_G0018668)	Actr10 (MGP_SPRETEiJ_G0018667)	Frmd6 (MGP_SPRETEiJ_G0018666) #16	Tmx1 (MGP_SPRETEiJ_G0018665) #17	Trim9 (MGP_SPRETEiJ_G0018664) #18	Pygl (MGP_SPRETEiJ_G0018663) #19	Abhd12b (MGP_SPRETEiJ_G0018662) #20	Nin (MGP_SPRETEiJ_G0018661) #21	Sav1 (MGP_SPRETEiJ_G0018660) #22	MGP_SPRETEiJ_G0018659	Atl1 (MGP_SPRETEiJ_G0018658) #23	Map4k5 (MGP_SPRETEiJ_G0018657) #24	Cdkl1 (MGP_SPRETEiJ_G0018656) #25	Dmac2l (MGP_SPRETEiJ_G0018655) #26	L2hgdh (MGP_SPRETEiJ_G0018654) #27	Sos2 (MGP_SPRETEiJ_G0018653) #28	Vcpkmt (MGP_SPRETEiJ_G0018652) #29	Arf6 (MGP_SPRETEiJ_G0018651) #30	MGP_SPRETEiJ_G0018650	Nemf (MGP_SPRETEiJ_G0018649) #31	Klhdc2 (MGP_SPRETEiJ_G0018648) #32	Klhdc1 (MGP_SPRETEiJ_G0018647) #33	Pole2 (MGP_SPRETEiJ_G0018646) #34	MGP_SPRETEiJ_G0018645
Ryukyu mouse	MODERN SPECIES	3	Gpr135 (MGP_CAROLIEiJ_G0017830)	Daam1 (MGP_CAROLIEiJ_G0017829)	Dact1 (MGP_CAROLIEiJ_G0017828)	2700049A03Rik (MGP_CAROLIEiJ_G0017827)	MGP_CAROLIEiJ_G0017826	Tomm20l (MGP_CAROLIEiJ_G0017825)	Arid4a (MGP_CAROLIEiJ_G0017824)	Psma3 (MGP_CAROLIEiJ_G0017823)	Actr10 (MGP_CAROLIEiJ_G0017822)	Frmd6 (MGP_CAROLIEiJ_G0017821) #16	Tmx1 (MGP_CAROLIEiJ_G0017820) #17	Trim9 (MGP_CAROLIEiJ_G0017819) #18	Pygl (MGP_CAROLIEiJ_G0017818) #19	Abhd12b (MGP_CAROLIEiJ_G0017817) #20	Nin (MGP_CAROLIEiJ_G0017816) #21	Sav1 (MGP_CAROLIEiJ_G0017815) #22	MGP_CAROLIEiJ_G0017814	Atl1 (MGP_CAROLIEiJ_G0017813) #23	Map4k5 (MGP_CAROLIEiJ_G0017812) #24	Cdkl1 (MGP_CAROLIEiJ_G0017811) #25	Dmac2l (MGP_CAROLIEiJ_G0017810) #26	L2hgdh (MGP_CAROLIEiJ_G0017809) #27	Sos2 (MGP_CAROLIEiJ_G0017808) #28	Vcpkmt (MGP_CAROLIEiJ_G0017807) #29	Arf6 (MGP_CAROLIEiJ_G0017806) #30	MGP_CAROLIEiJ_G0017805	Nemf (MGP_CAROLIEiJ_G0017804) #31	Klhdc2 (MGP_CAROLIEiJ_G0017803) #32	Klhdc1 (MGP_CAROLIEiJ_G0017802) #33	Pole2 (MGP_CAROLIEiJ_G0017801) #34	MGP_CAROLIEiJ_G0017800
Shrew mouse	MODERN SPECIES	20	Gpr135 (MGP_PahariEiJ_G0029586)	Daam1 (MGP_PahariEiJ_G0029585)	Dact1 (MGP_PahariEiJ_G0029584)	2700049A03Rik (MGP_PahariEiJ_G0029583)	Timm9 (MGP_PahariEiJ_G0029582)	Tomm20l (MGP_PahariEiJ_G0029581)	Arid4a (MGP_PahariEiJ_G0029580)	Psma3 (MGP_PahariEiJ_G0029579)	Actr10 (MGP_PahariEiJ_G0029578)	Frmd6 (MGP_PahariEiJ_G0029577) #16	Tmx1 (MGP_PahariEiJ_G0029576) #17	Trim9 (MGP_PahariEiJ_G0029575) #18	Pygl (MGP_PahariEiJ_G0029574) #19	Abhd12b (MGP_PahariEiJ_G0029573) #20	Nin (MGP_PahariEiJ_G0029572) #21	Sav1 (MGP_PahariEiJ_G0029571) #22	MGP_PahariEiJ_G0029570	Atl1 (MGP_PahariEiJ_G0029569) #23	Map4k5 (MGP_PahariEiJ_G0029568) #24	Cdkl1 (MGP_PahariEiJ_G0029567) #25	Dmac2l (MGP_PahariEiJ_G0029566) #26	L2hgdh (MGP_PahariEiJ_G0029565) #27	Sos2 (MGP_PahariEiJ_G0029564) #28	Vcpkmt (MGP_PahariEiJ_G0029563) #29	Arf6 (MGP_PahariEiJ_G0029562) #30	MGP_PahariEiJ_G0029561	MGP_PahariEiJ_G0029560 #31	Klhdc2 (MGP_PahariEiJ_G0029559) #32	Klhdc1 (MGP_PahariEiJ_G0029558) #33	Pole2 (MGP_PahariEiJ_G0029557) #34	MGP_PahariEiJ_G0029556
Rat	MODERN SPECIES	16	AABR07064753.1 (ENSRNOG00000032924)	Dact1 (ENSRNOG00000008445)	LOC690035 (ENSRNOG00000008244)	Timm9 (ENSRNOG00000008222)	Tomm20l (ENSRNOG00000054663)	Arid4a (ENSRNOG00000026239)	ENSRNOG00000062478	Psma3 (ENSRNOG00000007851)	Actr10 (ENSRNOG00000007504)	Frmd6 (ENSRNOG00000007329) #16	Tmx1 (ENSRNOG00000057934) #17	Trim9 (ENSRNOG00000007031) #18	Pygl (ENSRNOG00000006388) #19	Abhd12b (ENSRNOG00000026855) #20	Nin (ENSRNOG00000005540) #21	Sav1 (ENSRNOG00000005264) #22	Atl1 (ENSRNOG00000005063) #23	Map4k5 (ENSRNOG00000004923) #24	Cdkl1 (ENSRNOG00000038720) #25	Dmac2l (ENSRNOG00000004893) #26	L2hgdh (ENSRNOG00000004857) #27	ENSRNOG00000067932	Sos2 (ENSRNOG00000004826) #28	Vcpkmt (ENSRNOG00000065305) #29	Arf6 (ENSRNOG00000070951) #30	AABR07064719.2 (ENSRNOG00000056128) #31	Klhdc2 (ENSRNOG00000004474) #32	AABR07064716.1 (ENSRNOG00000028058)	ENSRNOG00000066035	Klhdc1 (ENSRNOG00000004425) #33	Pole2 (ENSRNOG00000004242) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	684										Frmd6 (ENSNGAG00000015139) #16	Tmx1 (ENSNGAG00000017261) #17	Trim9 (ENSNGAG00000008991) #18	Pygl (ENSNGAG00000003217) #19	Abhd12b (ENSNGAG00000024196) #20	Nin (ENSNGAG00000010306) #21	Sav1 (ENSNGAG00000022755) #22	Atl1 (ENSNGAG00000005287) #23	Map4k5 (ENSNGAG00000017115) #24	Cdkl1 (ENSNGAG00000009359) #25	Dmac2l (ENSNGAG00000013412) #26	L2hgdh (ENSNGAG00000015201) #27	Sos2 (ENSNGAG00000020145) #28	Vcpkmt (ENSNGAG00000010479) #29	ENSNGAG00000001008	Arf6 (ENSNGAG00000021182) #30	ENSNGAG00000020523 #31	ENSNGAG00000021321	Klhdc2 (ENSNGAG00000002689) #32	Klhdc1 (ENSNGAG00000019790) #33	Pole2 (ENSNGAG00000018619) #34	Dnaaf2 (ENSNGAG00000019379) #35
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	41	Gpr137c (ENSJJAG00000008965) #9	Txndc16 (ENSJJAG00000023879) #10	ENSJJAG00000012687	Ptger2 (ENSJJAG00000023226) #11	Ptgdr (ENSJJAG00000018642) #12	Nid2 (ENSJJAG00000013248) #13	Rtraf (ENSJJAG00000022799) #14	Gng2 (ENSJJAG00000014293) #15	Frmd6 (ENSJJAG00000006781) #16	ENSJJAG00000018098	ENSJJAG00000019783 #17	Trim9 (ENSJJAG00000020563) #18	Pygl (ENSJJAG00000013632) #19	ENSJJAG00000023335 #20	Nin (ENSJJAG00000017115) #21	ENSJJAG00000014964 #22	Atl1 (ENSJJAG00000010744) #23	Map4k5 (ENSJJAG00000021048) #24	Cdkl1 (ENSJJAG00000021944) #25	Dmac2l (ENSJJAG00000017123) #26	L2hgdh (ENSJJAG00000022441) #27	Sos2 (ENSJJAG00000009626) #28	Vcpkmt (ENSJJAG00000018572) #29	Arf6 (ENSJJAG00000015638) #30	ENSJJAG00000023001 #31	Klhdc2 (ENSJJAG00000020249) #32	Klhdc1 (ENSJJAG00000004235) #33	ENSJJAG00000021597	Pole2 (ENSJJAG00000005554) #34	ENSJJAG00000016576	Dnaaf2 (ENSJJAG00000021409) #35
Lesser Egyptian jerboa	MODERN SPECIES	115	Rab3c (ENSJJAG00000000669)	Plk2 (ENSJJAG00000001477)	Actbl2 (ENSJJAG00000014745)	Gpbp1 (ENSJJAG00000006354)	Mier3 (ENSJJAG00000009889)	ENSJJAG00000011528	Map3k1 (ENSJJAG00000013490)	Ankrd55 (ENSJJAG00000016938)	Il6st (ENSJJAG00000013997)	Il31ra (ENSJJAG00000014278)	Ddx4 (ENSJJAG00000015867)	Slc38a9 (ENSJJAG00000019191)	Plpp1 (ENSJJAG00000020140)	Mtrex (ENSJJAG00000020975)	Dhx29 (ENSJJAG00000024034)	ENSJJAG00000019260 #22	Ccno (ENSJJAG00000019572)	Mcidas (ENSJJAG00000023811)	Gpx8 (ENSJJAG00000023966)	Gzmk (ENSJJAG00000024241)	Esm1 (ENSJJAG00000000510)	ENSJJAG00000002712	Snx18 (ENSJJAG00000007684)	Hspb3 (ENSJJAG00000014004)	Arl15 (ENSJJAG00000012052)	Ndufs4 (ENSJJAG00000013703)	Fst (ENSJJAG00000014889)	ENSJJAG00000015304	Itga2 (ENSJJAG00000018880)	Itga1 (ENSJJAG00000021426)	Pelo (ENSJJAG00000015032)
Kangaroo rat	MODERN SPECIES	335	Psmc6 (ENSDORG00000016408) #7	Ero1a (ENSDORG00000016406) #8	Gpr137c (ENSDORG00000016405) #9	Txndc16 (ENSDORG00000016675) #10	Ptger2 (ENSDORG00000010992) #11	Ptgdr (ENSDORG00000009401) #12	Nid2 (ENSDORG00000012337) #13	ENSDORG00000012335 #14	Gng2 (ENSDORG00000029205) #15	Frmd6 (ENSDORG00000009871) #16	Tmx1 (ENSDORG00000014646) #17	Trim9 (ENSDORG00000008199) #18	Pygl (ENSDORG00000008683) #19	Abhd12b (ENSDORG00000003795) #20	Nin (ENSDORG00000000060) #21	Sav1 (ENSDORG00000000059) #22	Atl1 (ENSDORG00000000058) #23	Map4k5 (ENSDORG00000002899) #24	Cdkl1 (ENSDORG00000000216) #25	Dmac2l (ENSDORG00000000213) #26	ENSDORG00000014350 #27	Sos2 (ENSDORG00000002613) #28	Vcpkmt (ENSDORG00000002612) #29	Arf6 (ENSDORG00000024175) #30	ENSDORG00000026576 #31	Klhdc2 (ENSDORG00000010208) #32	Klhdc1 (ENSDORG00000009859) #33	Pole2 (ENSDORG00000000302) #34	ENSDORG00000000300 #35	ENSDORG00000023415 #36	ENSDORG00000000294
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b.b.b
Hystricomorpha	ANCESTRAL SPECIES	15	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	18	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b.b.b
Hystricomorpha_b	ANCESTRAL SPECIES	18	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b.b.b
Long-tailed chinchilla	MODERN SPECIES	116	ENSCLAG00000013485 #7	ERO1A (ENSCLAG00000007882) #8	GPR137C (ENSCLAG00000008672) #9	TXNDC16 (ENSCLAG00000011425) #10	PTGER2 (ENSCLAG00000011936) #11	PTGDR (ENSCLAG00000013111) #12	NID2 (ENSCLAG00000010006) #13	RTRAF (ENSCLAG00000010765) #14	GNG2 (ENSCLAG00000008554) #15	FRMD6 (ENSCLAG00000009659) #16	TMX1 (ENSCLAG00000012466) #17	TRIM9 (ENSCLAG00000016405) #18	PYGL (ENSCLAG00000010968) #19	ABHD12B (ENSCLAG00000009260) #20	NIN (ENSCLAG00000009323) #21	SAV1 (ENSCLAG00000009132) #22	ATL1 (ENSCLAG00000014538) #23	MAP4K5 (ENSCLAG00000012379) #24	CDKL1 (ENSCLAG00000009074) #25	DMAC2L (ENSCLAG00000011112) #26	L2HGDH (ENSCLAG00000007771) #27	SOS2 (ENSCLAG00000010549) #28	VCPKMT (ENSCLAG00000009925) #29	ARF6 (ENSCLAG00000018079) #30	NEMF (ENSCLAG00000012469) #31	KLHDC2 (ENSCLAG00000016294) #32	KLHDC1 (ENSCLAG00000011115) #33	POLE2 (ENSCLAG00000013349) #34	DNAAF2 (ENSCLAG00000013335) #35	MGAT2 (ENSCLAG00000017895)	ENSCLAG00000013834
Degu	MODERN SPECIES	143	PTGDR (ENSODEG00000012057) #12	ENSODEG00000013970	ENSODEG00000011443	ENSODEG00000011601	NID2 (ENSODEG00000012414) #13	ENSODEG00000010999 #14	ENSODEG00000011408	GNG2 (ENSODEG00000011344) #15	ENSODEG00000019879	FRMD6 (ENSODEG00000011173) #16	ENSODEG00000011543 #17	TRIM9 (ENSODEG00000011533) #18	PYGL (ENSODEG00000011563) #19	ABHD12B (ENSODEG00000011544) #20	NIN (ENSODEG00000010876) #21	SAV1 (ENSODEG00000012011) #22	ATL1 (ENSODEG00000011772) #23	ENSODEG00000011847 #24	ENSODEG00000011537	CDKL1 (ENSODEG00000011708) #25	DMAC2L (ENSODEG00000011553) #26	L2HGDH (ENSODEG00000012605) #27	ENSODEG00000011751	ENSODEG00000012187	ENSODEG00000012746	ENSODEG00000013334 #28	VCPKMT (ENSODEG00000011299) #29	ARF6 (ENSODEG00000020106) #30	NEMF (ENSODEG00000013310) #31	KLHDC2 (ENSODEG00000013007) #32	KLHDC1 (ENSODEG00000013185) #33
Guinea pig	MODERN SPECIES	23	ERO1A (ENSCPOG00000007439) #8	GPR137C (ENSCPOG00000007435) #9	TXNDC16 (ENSCPOG00000012597) #10	PTGER2 (ENSCPOG00000031528) #11	PTGDR (ENSCPOG00000006861) #12	NID2 (ENSCPOG00000001320) #13	RTRAF (ENSCPOG00000040014) #14	GNG2 (ENSCPOG00000039841) #15	FRMD6 (ENSCPOG00000003119) #16	TMX1 (ENSCPOG00000031959) #17	TRIM9 (ENSCPOG00000010456) #18	PYGL (ENSCPOG00000006129) #19	ABHD12B (ENSCPOG00000014872) #20	ENSCPOG00000008548	NIN (ENSCPOG00000006119) #21	SAV1 (ENSCPOG00000031808) #22	ATL1 (ENSCPOG00000040134) #23	MAP4K5 (ENSCPOG00000014479) #24	CDKL1 (ENSCPOG00000034915) #25	DMAC2L (ENSCPOG00000014471) #26	L2HGDH (ENSCPOG00000010700) #27	SOS2 (ENSCPOG00000010690) #28	VCPKMT (ENSCPOG00000011127) #29	ARF6 (ENSCPOG00000008137) #30	NEMF (ENSCPOG00000011839) #31	KLHDC2 (ENSCPOG00000011835) #32	KLHDC1 (ENSCPOG00000038390) #33	POLE2 (ENSCPOG00000004304) #34	DNAAF2 (ENSCPOG00000009147) #35	MGAT2 (ENSCPOG00000009139)	ENSCPOG00000037100
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000050455	TXNDC16 (ENSHGLG00000010925) #10	PTGER2 (ENSHGLG00000040443) #11	PTGDR (ENSHGLG00000011361) #12	NID2 (ENSHGLG00000012453) #13	ENSHGLG00000011931 #14	GNG2 (ENSHGLG00000037657) #15	FRMD6 (ENSHGLG00000013454) #16	ENSHGLG00000046758	TMX1 (ENSHGLG00000012700) #17	TRIM9 (ENSHGLG00000011753) #18	PYGL (ENSHGLG00000011923) #19	ABHD12B (ENSHGLG00000017092) #20	NIN (ENSHGLG00000010798) #21	ENSHGLG00000039372	ENSHGLG00000014486 #22	ATL1 (ENSHGLG00000017094) #23	MAP4K5 (ENSHGLG00000011509) #24	ENSHGLG00000007162	CDKL1 (ENSHGLG00000042701) #25	DMAC2L (ENSHGLG00000042464) #26	L2HGDH (ENSHGLG00000010171) #27	SOS2 (ENSHGLG00000011807) #28	ENSHGLG00000044017	METTL21D (ENSHGLG00000011833) #29	ENSHGLG00000012671	ARF6 (ENSHGLG00000040454) #30	NEMF (ENSHGLG00000014110) #31	KLHDC2 (ENSHGLG00000014323) #32	KLHDC1 (ENSHGLG00000014487) #33	POLE2 (ENSHGLG00000015308) #34
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000041497	ENSHGLG00000010972	ENSHGLG00000046515	ENSHGLG00000040882	ENSHGLG00000007629	ENSHGLG00000033865	ENSHGLG00000034873	ENSHGLG00000034867	F9 (ENSHGLG00000050058)	MCF2 (ENSHGLG00000013161)	ENSHGLG00000009095	ATP11C (ENSHGLG00000007759)	ENSHGLG00000047068	SOX3 (ENSHGLG00000039208)	ENSHGLG00000039059	ENSHGLG00000004407 #22	ENSHGLG00000037583	ENSHGLG00000036529	ENSHGLG00000049672	ENSHGLG00000038876	ENSHGLG00000032750	ENSHGLG00000035566	SLITRK2 (ENSHGLG00000007935)	ENSHGLG00000045634	ENSHGLG00000040472	FMR1 (ENSHGLG00000000576)	ENSHGLG00000019716	ENSHGLG00000028863	AFF2 (ENSHGLG00000000634)	IDS (ENSHGLG00000049970)	ENSHGLG00000043323
Naked mole-rat female	MODERN SPECIES	15	USP7 (ENSHGLG00000018774)	ENSHGLG00000036166	PMM2 (ENSHGLG00000042320)	TMEM186 (ENSHGLG00000006781)	ABAT (ENSHGLG00000006051)	ENSHGLG00000017658	ENSHGLG00000032356	ENSHGLG00000020155	ENSHGLG00000042436	ENSHGLG00000037965	ENSHGLG00000013307	ENSHGLG00000016944	ENSHGLG00000015461	ENSHGLG00000041009	ENSHGLG00000044681	ENSHGLG00000020958 #22	ENSHGLG00000014051	ENSHGLG00000016910	C16orf89 (ENSHGLG00000010662)	NAGPA (ENSHGLG00000009058)	SEC14L5 (ENSHGLG00000007409)	PPL (ENSHGLG00000017647)	ENSHGLG00000048344	UBN1 (ENSHGLG00000013188)	GLYR1 (ENSHGLG00000019553)	ROGDI (ENSHGLG00000018315)	ENSHGLG00000019056	ENSHGLG00000014562	ENSHGLG00000010731	ENSHGLG00000047297	MGRN1 (ENSHGLG00000010412)
Sciuridae	ANCESTRAL SPECIES	8	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Marmotini	ANCESTRAL SPECIES	15	ENSGT00940000158275	ENSGT00950000182808.a.a.b.a	ENSGT00390000018436.a.a	ENSGT00940000157547	ENSGT00520000055955	ENSGT00830000128402	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.a
Alpin marmot	MODERN SPECIES	1	SUSD6 (ENSMMMG00000000906)	SRSF5 (ENSMMMG00000000934)	SLC10A1 (ENSMMMG00000000980)	SMOC1 (ENSMMMG00000001018)	SLC8A3 (ENSMMMG00000001131)	COX16 (ENSMMMG00000001177)	ENSMMMG00000001187	NID2 (ENSMMMG00000001212) #13	RTRAF (ENSMMMG00000001263) #14	FRMD6 (ENSMMMG00000001292) #16	ENSMMMG00000001345 #17	ENSMMMG00000001375	PYGL (ENSMMMG00000001386) #19	ABHD12B (ENSMMMG00000001413) #20	NIN (ENSMMMG00000001504) #21	SAV1 (ENSMMMG00000001694) #22	ENSMMMG00000001706 #23	MAP4K5 (ENSMMMG00000001735) #24	CDKL1 (ENSMMMG00000001936) #25	DMAC2L (ENSMMMG00000001954) #26	L2HGDH (ENSMMMG00000001966) #27	SOS2 (ENSMMMG00000002005) #28	VCPKMT (ENSMMMG00000002166) #29	ARF6 (ENSMMMG00000002177) #30	NEMF (ENSMMMG00000002268) #31	KLHDC2 (ENSMMMG00000002856) #32	KLHDC1 (ENSMMMG00000002951) #33	POLE2 (ENSMMMG00000002980) #34	DNAAF2 (ENSMMMG00000003007) #35	MGAT2 (ENSMMMG00000003019)	ENSMMMG00000003026
Marmotini_b	ANCESTRAL SPECIES	14	ENSGT00940000158275	ENSGT00950000182808.a.a.b.a	ENSGT00390000018436.a.a	ENSGT00940000157547	ENSGT00520000055955	ENSGT00830000128402.q	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Arctic ground squirrel	MODERN SPECIES	84			SMOC1 (ENSUPAG00010001178)	SLC8A3 (ENSUPAG00010001266)	ENSUPAG00010001319	ENSUPAG00010001337	NID2 (ENSUPAG00010001363) #13	RTRAF (ENSUPAG00010001411) #14	GNG2 (ENSUPAG00010001421) #15	FRMD6 (ENSUPAG00010001440) #16	TMX1 (ENSUPAG00010001455) #17	TRIM9 (ENSUPAG00010001494) #18	PYGL (ENSUPAG00010001687) #19	ABHD12B (ENSUPAG00010001707) #20	NIN (ENSUPAG00010001816) #21	SAV1 (ENSUPAG00010007736) #22	ATL1 (ENSUPAG00010007750) #23	MAP4K5 (ENSUPAG00010007764) #24	CDKL1 (ENSUPAG00010007853) #25	DMAC2L (ENSUPAG00010007867) #26	L2HGDH (ENSUPAG00010007904) #27	SOS2 (ENSUPAG00010007931) #28	VCPKMT (ENSUPAG00010008108) #29	ARF6 (ENSUPAG00010008117) #30	NEMF (ENSUPAG00010008130) #31	KLHDC2 (ENSUPAG00010008179) #32	KLHDC1 (ENSUPAG00010008181) #33	POLE2 (ENSUPAG00010008225) #34	DNAAF2 (ENSUPAG00010008249) #35	ENSUPAG00010008252 #36	ENSUPAG00010008255
Squirrel	MODERN SPECIES	95	ENSSTOG00000023687	SMOC1 (ENSSTOG00000003894)	SLC8A3 (ENSSTOG00000003907)	COX16 (ENSSTOG00000031505)	SYNJ2BP (ENSSTOG00000014437)	NID2 (ENSSTOG00000001067) #13	ENSSTOG00000029910	ENSSTOG00000034522 #14	GNG2 (ENSSTOG00000027320) #15	FRMD6 (ENSSTOG00000003275) #16	TMX1 (ENSSTOG00000016236) #17	TRIM9 (ENSSTOG00000011982) #18	PYGL (ENSSTOG00000011960) #19	ABHD12B (ENSSTOG00000011954) #20	NIN (ENSSTOG00000021244) #21	SAV1 (ENSSTOG00000026356) #22	ATL1 (ENSSTOG00000011921) #23	MAP4K5 (ENSSTOG00000021920) #24	CDKL1 (ENSSTOG00000028678) #25	DMAC2L (ENSSTOG00000034611) #26	L2HGDH (ENSSTOG00000011889) #27
Eurasian red squirrel	MODERN SPECIES	11	GPR137C (ENSSVLG00005006997) #9	TXNDC16 (ENSSVLG00005007046) #10	PTGER2 (ENSSVLG00005007122) #11	ENSSVLG00005007151	PTGDR (ENSSVLG00005007172) #12	NID2 (ENSSVLG00005007195) #13	RTRAF (ENSSVLG00005007221) #14	ENSSVLG00005007247	FRMD6 (ENSSVLG00005007280) #16	ENSSVLG00005007323	ENSSVLG00005007350 #17	TRIM9 (ENSSVLG00005007402) #18	PYGL (ENSSVLG00005007538) #19	ABHD12B (ENSSVLG00005007765) #20	NIN (ENSSVLG00005007948) #21	SAV1 (ENSSVLG00005008036) #22	ATL1 (ENSSVLG00005008081) #23	MAP4K5 (ENSSVLG00005008150) #24	CDKL1 (ENSSVLG00005008203) #25	DMAC2L (ENSSVLG00005008238) #26	L2HGDH (ENSSVLG00005008301) #27	SOS2 (ENSSVLG00005008363) #28	VCPKMT (ENSSVLG00005008401) #29	ARF6 (ENSSVLG00005008433) #30	NEMF (ENSSVLG00005008455) #31	KLHDC2 (ENSSVLG00005008503) #32	KLHDC1 (ENSSVLG00005008548) #33	ENSSVLG00005008574	POLE2 (ENSSVLG00005008639) #34	DNAAF2 (ENSSVLG00005008952) #35	MGAT2 (ENSSVLG00005008964)
Lagomorpha	ANCESTRAL SPECIES	14	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00940000174635	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Pika	MODERN SPECIES	4474											TMX1 (ENSOPRG00000002179) #17	TRIM9 (ENSOPRG00000002140) #18	ENSOPRG00000002104 #19	ABHD12B (ENSOPRG00000002078) #20	NIN (ENSOPRG00000002009) #21	SAV1 (ENSOPRG00000001994) #22	ATL1 (ENSOPRG00000001968) #23
Rabbit	MODERN SPECIES	8	STYX (ENSOCUG00000029442)	PSMC6 (ENSOCUG00000012638) #7	ERO1A (ENSOCUG00000012632) #8	GPR137C (ENSOCUG00000012627) #9	TXNDC16 (ENSOCUG00000012614) #10	PTGER2 (ENSOCUG00000012608) #11	PTGDR (ENSOCUG00000003474) #12	NID2 (ENSOCUG00000003689) #13	RTRAF (ENSOCUG00000014681) #14	FRMD6 (ENSOCUG00000015126) #16	TMX1 (ENSOCUG00000003980) #17	TRIM9 (ENSOCUG00000015541) #18	PYGL (ENSOCUG00000015527) #19	ABHD12B (ENSOCUG00000015511) #20	NIN (ENSOCUG00000015494) #21	SAV1 (ENSOCUG00000017714) #22	ATL1 (ENSOCUG00000017706) #23	MAP4K5 (ENSOCUG00000012996) #24	CDKL1 (ENSOCUG00000023744) #25	DMAC2L (ENSOCUG00000003348) #26	L2HGDH (ENSOCUG00000011422) #27	SOS2 (ENSOCUG00000006052) #28	VCPKMT (ENSOCUG00000006049) #29	ARF6 (ENSOCUG00000001692) #30	NEMF (ENSOCUG00000017384) #31	KLHDC2 (ENSOCUG00000017378) #32	KLHDC1 (ENSOCUG00000017367) #33	ENSOCUG00000031174	POLE2 (ENSOCUG00000015480) #34	ENSOCUG00000015466 #35	MGAT2 (ENSOCUG00000015463)
Tree shrew	MODERN SPECIES	5046												TRIM9 (ENSTBEG00000007811) #18	PYGL (ENSTBEG00000006221) #19	ABHD12B (ENSTBEG00000005010) #20	NIN (ENSTBEG00000001818) #21	ENSTBEG00000001253 #22	ATL1 (ENSTBEG00000008427) #23
Primates	ANCESTRAL SPECIES	2	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Haplorrhini	ANCESTRAL SPECIES	12	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Simiiformes	ANCESTRAL SPECIES	2	ENSGT01020000230346.A.cb.a #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Catarrhini	ANCESTRAL SPECIES	9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT00390000005163.jb #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00530000065161	ENSGT00390000013555	ENSGT00940000156593 #30	ENSGT00550000076327	ENSGT00390000018516 #31	ENSGT00940000157150 #32
Hominoidea	ANCESTRAL SPECIES	12	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT00910000147418	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959.k #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00530000065161	ENSGT00940000155525.n	ENSGT00390000013555	ENSGT00940000156593.vc #30	ENSGT00550000076327	ENSGT00940000156593.wc.b #30	ENSGT00390000018516 #31
Hominidae	ANCESTRAL SPECIES	14	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT00910000147418	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959.k #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00530000065161	ENSGT00940000155525.n	ENSGT00390000013555	ENSGT00940000156593.vc #30	ENSGT00550000076327	ENSGT00390000018516 #31	ENSGT00940000157150 #32
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	12	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT00910000147418	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959.k #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a.k #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000156593.vc #30	ENSGT00550000076327	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Gorilla	MODERN SPECIES	5	GNPNAT1 (ENSGGOG00000025060)	STYX (ENSGGOG00000001822)	PSMC6 (ENSGGOG00000002152) #7	ERO1A (ENSGGOG00000012930) #8	GPR137C (ENSGGOG00000014213) #9	TXNDC16 (ENSGGOG00000016034) #10	PTGER2 (ENSGGOG00000011992) #11	PTGDR (ENSGGOG00000010473) #12	ENSGGOG00000022813	FRMD6 (ENSGGOG00000002249) #16	TMX1 (ENSGGOG00000009768) #17	TRIM9 (ENSGGOG00000005604) #18	ENSGGOG00000016610 #20	PYGL (ENSGGOG00000016619) #19	NIN (ENSGGOG00000005976) #21	SAV1 (ENSGGOG00000014607) #22	ENSGGOG00000036975	ATL1 (ENSGGOG00000005481) #23	MAP4K5 (ENSGGOG00000027409) #24	CDKL1 (ENSGGOG00000015887) #25	ENSGGOG00000015881 #26	L2HGDH (ENSGGOG00000003027) #27	SOS2 (ENSGGOG00000015477) #28	VCPKMT (ENSGGOG00000012706) #29	ENSGGOG00000015476	ENSGGOG00000022058	ARF6 (ENSGGOG00000043801) #30	ENSGGOG00000028138	NEMF (ENSGGOG00000009030) #31	KLHDC2 (ENSGGOG00000009016) #32	KLHDC1 (ENSGGOG00000005642) #33
Homo/Pan group	ANCESTRAL SPECIES	11	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT00910000147418	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959.k #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a.k #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000156593.vc #30	ENSGT00550000076327	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Pan	ANCESTRAL SPECIES	8	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT00910000147418	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959.k #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a.k #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00530000065161	ENSGT00940000156593.vc #30	ENSGT00550000076327	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Chimpanzee	MODERN SPECIES	5	TXNDC16 (ENSPTRG00000006348) #10	PTGER2 (ENSPTRG00000006347) #11	PTGDR (ENSPTRG00000048446) #12	ENSPTRG00000047915	NID2 (ENSPTRG00000006345) #13	RTRAF (ENSPTRG00000006344) #14	ENSPTRG00000052475	ENSPTRG00000052418	GNG2 (ENSPTRG00000052662) #15	FRMD6 (ENSPTRG00000006340) #16	TMX1 (ENSPTRG00000006339) #17	TRIM9 (ENSPTRG00000006338) #18	ABHD12B (ENSPTRG00000006336) #20	PYGL (ENSPTRG00000006337) #19	NIN (ENSPTRG00000006335) #21	SAV1 (ENSPTRG00000006334) #22	ATL1 (ENSPTRG00000023829) #23	MAP4K5 (ENSPTRG00000006332) #24	CDKL1 (ENSPTRG00000006331) #25	DMAC2L (ENSPTRG00000006330) #26	L2HGDH (ENSPTRG00000006329) #27	SOS2 (ENSPTRG00000006328) #28	VCPKMT (ENSPTRG00000006327) #29	ENSPTRG00000006326	ARF6 (ENSPTRG00000052222) #30	ENSPTRG00000048175	NEMF (ENSPTRG00000006323) #31	KLHDC2 (ENSPTRG00000006322) #32	KLHDC1 (ENSPTRG00000006320) #33	POLE2 (ENSPTRG00000006319) #34	DNAAF2 (ENSPTRG00000030748) #35
Bonobo	MODERN SPECIES	5	TXNDC16 (ENSPPAG00000000056) #10	PTGER2 (ENSPPAG00000038128) #11	PTGDR (ENSPPAG00000037353) #12	ENSPPAG00000029745	NID2 (ENSPPAG00000033880) #13	RTRAF (ENSPPAG00000031014) #14	ENSPPAG00000007967	ENSPPAG00000029343	ENSPPAG00000024113 #15	FRMD6 (ENSPPAG00000040522) #16	TMX1 (ENSPPAG00000038812) #17	TRIM9 (ENSPPAG00000029668) #18	ABHD12B (ENSPPAG00000037619) #20	PYGL (ENSPPAG00000035478) #19	NIN (ENSPPAG00000042306) #21	SAV1 (ENSPPAG00000027385) #22	ATL1 (ENSPPAG00000033293) #23	MAP4K5 (ENSPPAG00000025090) #24	CDKL1 (ENSPPAG00000041073) #25	ENSPPAG00000022855 #26	L2HGDH (ENSPPAG00000027708) #27	SOS2 (ENSPPAG00000040633) #28	VCPKMT (ENSPPAG00000034936) #29	ENSPPAG00000034084	ARF6 (ENSPPAG00000033272) #30	ENSPPAG00000033256	NEMF (ENSPPAG00000033347) #31	KLHDC2 (ENSPPAG00000043559) #32	KLHDC1 (ENSPPAG00000037428) #33	POLE2 (ENSPPAG00000033486) #34	DNAAF2 (ENSPPAG00000042919) #35
Human	MODERN SPECIES	5	PSMC6 (ENSG00000100519) #7	ERO1A (ENSG00000197930) #8	GPR137C (ENSG00000180998) #9	TXNDC16 (ENSG00000087301) #10	PTGER2 (ENSG00000125384) #11	PTGDR (ENSG00000168229) #12	NID2 (ENSG00000087303) #13	RTRAF (ENSG00000087302) #14	GNG2 (ENSG00000186469) #15	FRMD6 (ENSG00000139926) #16	TMX1 (ENSG00000139921) #17	TRIM9 (ENSG00000100505) #18	ABHD12B (ENSG00000131969) #20	PYGL (ENSG00000100504) #19	NIN (ENSG00000100503) #21	SAV1 (ENSG00000151748) #22	ATL1 (ENSG00000198513) #23	MAP4K5 (ENSG00000012983) #24	CDKL1 (ENSG00000100490) #25	DMAC2L (ENSG00000125375) #26	L2HGDH (ENSG00000087299) #27	SOS2 (ENSG00000100485) #28	VCPKMT (ENSG00000100483) #29	ARF6 (ENSG00000165527) #30	NEMF (ENSG00000165525) #31	KLHDC2 (ENSG00000165516) #32	KLHDC1 (ENSG00000197776) #33	POLE2 (ENSG00000100479) #34	DNAAF2 (ENSG00000165506) #35	MGAT2 (ENSG00000168282)	RPL36AL (ENSG00000165502) #36
Orangutan	MODERN SPECIES	5	GPR137C (ENSPPYG00000033600) #9	TXNDC16 (ENSPPYG00000005818) #10	PTGER2 (ENSPPYG00000005817) #11	ENSPPYG00000005816 #12	NID2 (ENSPPYG00000005815) #13	RTRAF (ENSPPYG00000037492) #14	ENSPPYG00000005813	GNG2 (ENSPPYG00000005812) #15	FRMD6 (ENSPPYG00000005811) #16	ENSPPYG00000034927	TMX1 (ENSPPYG00000005810) #17	TRIM9 (ENSPPYG00000005809) #18	ABHD12B (ENSPPYG00000005807) #20	PYGL (ENSPPYG00000005808) #19	NIN (ENSPPYG00000005806) #21	SAV1 (ENSPPYG00000005805) #22	ATL1 (ENSPPYG00000005804) #23	MAP4K5 (ENSPPYG00000005803) #24	CDKL1 (ENSPPYG00000005802) #25	DMAC2L (ENSPPYG00000033217) #26	L2HGDH (ENSPPYG00000005800) #27	SOS2 (ENSPPYG00000005799) #28	VCPKMT (ENSPPYG00000005798) #29	ENSPPYG00000039796	ARF6 (ENSPPYG00000005795) #30	NEMF (ENSPPYG00000041653) #31	KLHDC2 (ENSPPYG00000005793) #32	KLHDC1 (ENSPPYG00000005792) #33	POLE2 (ENSPPYG00000005791) #34	DNAAF2 (ENSPPYG00000005790) #35	MGAT2 (ENSPPYG00000005789)
Gibbon	MODERN SPECIES	10	PTGER2 (ENSNLEG00000032985) #11	PTGDR (ENSNLEG00000012465) #12	NID2 (ENSNLEG00000012432) #13	RTRAF (ENSNLEG00000012406) #14	ENSNLEG00000019127	ENSNLEG00000012405	ENSNLEG00000031357	ENSNLEG00000027719 #15	FRMD6 (ENSNLEG00000012376) #16	TMX1 (ENSNLEG00000012362) #17	ENSNLEG00000029409	TRIM9 (ENSNLEG00000012351) #18	ABHD12B (ENSNLEG00000012291) #20	PYGL (ENSNLEG00000012305) #19	NIN (ENSNLEG00000012229) #21	SAV1 (ENSNLEG00000034625) #22	ENSNLEG00000036278	ATL1 (ENSNLEG00000012204) #23	MAP4K5 (ENSNLEG00000012174) #24	CDKL1 (ENSNLEG00000012166) #25	ENSNLEG00000012162 #26	L2HGDH (ENSNLEG00000012147) #27	SOS2 (ENSNLEG00000012114) #28	VCPKMT (ENSNLEG00000012103) #29	ENSNLEG00000012102	ENSNLEG00000030933	ENSNLEG00000030067 #30	NEMF (ENSNLEG00000012070) #31	KLHDC2 (ENSNLEG00000012047) #32	KLHDC1 (ENSNLEG00000012044) #33	POLE2 (ENSNLEG00000011982) #34
Cercopithecidae	ANCESTRAL SPECIES	7	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT00390000005163.jb #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000155525.n	ENSGT00390000013555	ENSGT00940000156593 #30	ENSGT00550000076327	ENSGT00390000018516 #31	ENSGT00940000157150 #32
Rhinopithecus	ANCESTRAL SPECIES	78	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00940000161656 #36	ENSGT00940000158830 #37
Golden snub-nosed monkey	MODERN SPECIES	2746											TMX1 (ENSRROG00000041170) #17	TRIM9 (ENSRROG00000039388) #18	PYGL (ENSRROG00000045015) #19	ABHD12B (ENSRROG00000038624) #20	NIN (ENSRROG00000043010) #21	SAV1 (ENSRROG00000039743) #22	ATL1 (ENSRROG00000008128) #23	MAP4K5 (ENSRROG00000037796) #24	CDKL1 (ENSRROG00000037408) #25	DMAC2L (ENSRROG00000028860) #26	L2HGDH (ENSRROG00000031958) #27	SOS2 (ENSRROG00000036891) #28	VCPKMT (ENSRROG00000035390) #29	ARF6 (ENSRROG00000025566) #30	NEMF (ENSRROG00000024459) #31	KLHDC2 (ENSRROG00000029172) #32	KLHDC1 (ENSRROG00000033656) #33	POLE2 (ENSRROG00000030066) #34	DNAAF2 (ENSRROG00000031163) #35	ENSRROG00000000313 #36	LRR1 (ENSRROG00000031134) #37
Black snub-nosed monkey	MODERN SPECIES	1465	ERO1A (ENSRBIG00000033737) #8	GPR137C (ENSRBIG00000038107) #9	TXNDC16 (ENSRBIG00000027274) #10	PTGER2 (ENSRBIG00000044285) #11	PTGDR (ENSRBIG00000017357) #12	ENSRBIG00000036759	NID2 (ENSRBIG00000015053) #13	RTRAF (ENSRBIG00000031280) #14	GNG2 (ENSRBIG00000035121) #15	FRMD6 (ENSRBIG00000043986) #16	TMX1 (ENSRBIG00000037627) #17	TRIM9 (ENSRBIG00000043562) #18	PYGL (ENSRBIG00000044715) #19	ABHD12B (ENSRBIG00000031867) #20	NIN (ENSRBIG00000029236) #21	SAV1 (ENSRBIG00000041514) #22	ATL1 (ENSRBIG00000039686) #23	MAP4K5 (ENSRBIG00000034683) #24	CDKL1 (ENSRBIG00000044473) #25	DMAC2L (ENSRBIG00000042839) #26	L2HGDH (ENSRBIG00000036201) #27	SOS2 (ENSRBIG00000041892) #28	VCPKMT (ENSRBIG00000038832) #29	ARF6 (ENSRBIG00000009391) #30	NEMF (ENSRBIG00000038274) #31	KLHDC2 (ENSRBIG00000036295) #32	KLHDC1 (ENSRBIG00000043605) #33	POLE2 (ENSRBIG00000037002) #34	DNAAF2 (ENSRBIG00000012684) #35	ENSRBIG00000006507 #36	LRR1 (ENSRBIG00000028057) #37
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT00390000005163.jb #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000155525.n	ENSGT00390000013555	ENSGT00940000156593 #30	ENSGT00550000076327	ENSGT00390000018516 #31	ENSGT00940000157150 #32
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000154891.g.a.a	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000155525.n	ENSGT00390000013555	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33
Macaca	ANCESTRAL SPECIES	1	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000154891.g.a.a	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000155525.n	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Pig-tailed macaque	MODERN SPECIES	577	TXNDC16 (ENSMNEG00000040284) #10	PTGER2 (ENSMNEG00000037348) #11	PTGDR (ENSMNEG00000029198) #12	ENSMNEG00000043115	NID2 (ENSMNEG00000044801) #13	RTRAF (ENSMNEG00000031967) #14	ENSMNEG00000035942	GNG2 (ENSMNEG00000029726) #15	FRMD6 (ENSMNEG00000044483) #16	ENSMNEG00000032886	TMX1 (ENSMNEG00000036032) #17	TRIM9 (ENSMNEG00000029312) #18	PYGL (ENSMNEG00000029779) #19	ABHD12B (ENSMNEG00000033360) #20	NIN (ENSMNEG00000045399) #21	SAV1 (ENSMNEG00000003044) #22	ATL1 (ENSMNEG00000042927) #23	MAP4K5 (ENSMNEG00000032632) #24	CDKL1 (ENSMNEG00000038807) #25	DMAC2L (ENSMNEG00000029226) #26	L2HGDH (ENSMNEG00000036800) #27	ENSMNEG00000028934	SOS2 (ENSMNEG00000027545) #28	VCPKMT (ENSMNEG00000042287) #29	ENSMNEG00000031593	ARF6 (ENSMNEG00000035341) #30	NEMF (ENSMNEG00000039343) #31	KLHDC2 (ENSMNEG00000041846) #32	KLHDC1 (ENSMNEG00000036986) #33	POLE2 (ENSMNEG00000022601) #34	DNAAF2 (ENSMNEG00000034164) #35
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147418	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.a.b.a.a.b.a	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT01100000263577.a.a.b.b.a.a.b.b.b.a.a.a	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Rhesus	MODERN SPECIES	17	TXNDC16 (ENSMMUG00000006997) #10	PTGER2 (ENSMMUG00000000023) #11	PTGDR (ENSMMUG00000000024) #12	NID2 (ENSMMUG00000018201) #13	RTRAF (ENSMMUG00000018200) #14	GNG2 (ENSMMUG00000010392)	FRMD6 (ENSMMUG00000018274) #16	ENSMMUG00000055095	TMX1 (ENSMMUG00000001901) #17	ENSMMUG00000056844	TRIM9 (ENSMMUG00000011051) #18	ENSMMUG00000064415	PYGL (ENSMMUG00000014670) #19	ABHD12B (ENSMMUG00000014667) #20	NIN (ENSMMUG00000014658) #21	SAV1 (ENSMMUG00000029358) #22	ATL1 (ENSMMUG00000009577) #23	MAP4K5 (ENSMMUG00000020550) #24	CDKL1 (ENSMMUG00000002616) #25	DMAC2L (ENSMMUG00000002615) #26	L2HGDH (ENSMMUG00000007468) #27	SOS2 (ENSMMUG00000007464) #28	VCPKMT (ENSMMUG00000007460) #29	ARF6 (ENSMMUG00000041889) #30	ENSMMUG00000049787	NEMF (ENSMMUG00000008214) #31	KLHDC2 (ENSMMUG00000029366) #32	KLHDC1 (ENSMMUG00000003914) #33	ENSMMUG00000057868	POLE2 (ENSMMUG00000003913) #34	DNAAF2 (ENSMMUG00000008284) #35
Crab-eating macaque	MODERN SPECIES	17	ENSMFAG00000001288 #11	PTGDR (ENSMFAG00000031583) #12	NID2 (ENSMFAG00000036323) #13	RTRAF (ENSMFAG00000035582) #14	ENSMFAG00000060107	GNG2 (ENSMFAG00000053414) #15	FRMD6 (ENSMFAG00000039658) #16	ENSMFAG00000057556	TMX1 (ENSMFAG00000042769) #17	ENSMFAG00000060841	TRIM9 (ENSMFAG00000032650) #18	ENSMFAG00000058146	ABHD12B (ENSMFAG00000035570) #20	PYGL (ENSMFAG00000006403) #19	NIN (ENSMFAG00000042051) #21	SAV1 (ENSMFAG00000032466) #22	ATL1 (ENSMFAG00000000528) #23	MAP4K5 (ENSMFAG00000001082) #24	CDKL1 (ENSMFAG00000003833) #25	DMAC2L (ENSMFAG00000042085) #26	L2HGDH (ENSMFAG00000044149) #27	SOS2 (ENSMFAG00000000174) #28	VCPKMT (ENSMFAG00000033945) #29	ARF6 (ENSMFAG00000001534) #30	NEMF (ENSMFAG00000005357) #31	KLHDC2 (ENSMFAG00000035256) #32	KLHDC1 (ENSMFAG00000003879) #33	ENSMFAG00000047329	POLE2 (ENSMFAG00000002595) #34	DNAAF2 (ENSMFAG00000045239) #35	MGAT2 (ENSMFAG00000043906)
Cercopithecinae_b	ANCESTRAL SPECIES	8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Olive baboon	MODERN SPECIES	17	ENSPANG00000023304 #7	ERO1A (ENSPANG00000008287) #8	GPR137C (ENSPANG00000016043) #9	TXNDC16 (ENSPANG00000007166) #10	ENSPANG00000046012	PTGER2 (ENSPANG00000008289) #11	NID2 (ENSPANG00000024492) #13	RTRAF (ENSPANG00000046678) #14	GNG2 (ENSPANG00000017511) #15	FRMD6 (ENSPANG00000016047) #16	TMX1 (ENSPANG00000024493) #17	TRIM9 (ENSPANG00000025018) #18	PYGL (ENSPANG00000011728) #19	ABHD12B (ENSPANG00000011729) #20	NIN (ENSPANG00000001131) #21	SAV1 (ENSPANG00000015297) #22	ATL1 (ENSPANG00000014239) #23	MAP4K5 (ENSPANG00000009733) #24	CDKL1 (ENSPANG00000024495) #25	DMAC2L (ENSPANG00000009735) #26	L2HGDH (ENSPANG00000017146) #27	SOS2 (ENSPANG00000017147) #28	VCPKMT (ENSPANG00000017148) #29	ARF6 (ENSPANG00000011140) #30	NEMF (ENSPANG00000023256) #31	ENSPANG00000039989	KLHDC2 (ENSPANG00000009939) #32	KLHDC1 (ENSPANG00000017514) #33	ENSPANG00000031975	POLE2 (ENSPANG00000006986) #34	DNAAF2 (ENSPANG00000000616) #35
Cercopithecinae_d	ANCESTRAL SPECIES	28	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.pb.b	ENSGT00940000157901 #13	ENSGT00390000005163.ib.a #14	ENSGT00910000147471	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000154891.g.a.a	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00510000046985.h.b.a.a.b	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00950000185463	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135.i #29	ENSGT00940000155525.n	ENSGT00390000013555	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33
Drill	MODERN SPECIES	1310	TXNDC16 (ENSMLEG00000037054) #10	PTGER2 (ENSMLEG00000032754) #11	PTGDR (ENSMLEG00000023723) #12	ENSMLEG00000044068	NID2 (ENSMLEG00000037182) #13	RTRAF (ENSMLEG00000044306) #14	ENSMLEG00000036900	GNG2 (ENSMLEG00000028752) #15	FRMD6 (ENSMLEG00000042636) #16	ENSMLEG00000011551	TMX1 (ENSMLEG00000030724) #17	TRIM9 (ENSMLEG00000043552) #18	PYGL (ENSMLEG00000043806) #19	ABHD12B (ENSMLEG00000041894) #20	NIN (ENSMLEG00000032270) #21	SAV1 (ENSMLEG00000019122) #22	ATL1 (ENSMLEG00000029085) #23	MAP4K5 (ENSMLEG00000031927) #24	CDKL1 (ENSMLEG00000031923) #25	ENSMLEG00000036262	DMAC2L (ENSMLEG00000031677) #26	L2HGDH (ENSMLEG00000036876) #27	SOS2 (ENSMLEG00000035177) #28	VCPKMT (ENSMLEG00000036659) #29	ENSMLEG00000043531	ENSMLEG00000043507	ENSMLEG00000020117	ARF6 (ENSMLEG00000018501) #30	NEMF (ENSMLEG00000042278) #31	KLHDC2 (ENSMLEG00000040961) #32	KLHDC1 (ENSMLEG00000041081) #33
Sooty mangabey	MODERN SPECIES	659	GPR137C (ENSCATG00000037232) #9	TXNDC16 (ENSCATG00000033073) #10	PTGER2 (ENSCATG00000039743) #11	PTGDR (ENSCATG00000037708) #12	ENSCATG00000031429	NID2 (ENSCATG00000033466) #13	RTRAF (ENSCATG00000044652) #14	ENSCATG00000039598	GNG2 (ENSCATG00000039135) #15	FRMD6 (ENSCATG00000029402) #16	TMX1 (ENSCATG00000041956) #17	TRIM9 (ENSCATG00000031831) #18	ABHD12B (ENSCATG00000044092) #20	PYGL (ENSCATG00000042890) #19	NIN (ENSCATG00000029858) #21	SAV1 (ENSCATG00000038605) #22	ENSCATG00000044172	ATL1 (ENSCATG00000042444) #23	MAP4K5 (ENSCATG00000039207) #24	CDKL1 (ENSCATG00000036751) #25	DMAC2L (ENSCATG00000015136) #26	L2HGDH (ENSCATG00000038178) #27	SOS2 (ENSCATG00000042288) #28	VCPKMT (ENSCATG00000038433) #29	ENSCATG00000035730	ENSCATG00000038332	ARF6 (ENSCATG00000011303) #30	NEMF (ENSCATG00000034553) #31	KLHDC2 (ENSCATG00000034524) #32	ENSCATG00000022293	KLHDC1 (ENSCATG00000042590) #33
Vervet Monkey	MODERN SPECIES	16	ERO1A (ENSCSAG00000015035) #8	GPR137C (ENSCSAG00000015040) #9	TXNDC16 (ENSCSAG00000015051) #10	PTGER2 (ENSCSAG00000015052) #11	PTGDR (ENSCSAG00000015056) #12	NID2 (ENSCSAG00000015064) #13	RTRAF (ENSCSAG00000015068) #14	GNG2 (ENSCSAG00000015076) #15	ENSCSAG00000015080	FRMD6 (ENSCSAG00000015086) #16	TMX1 (ENSCSAG00000015090) #17	TRIM9 (ENSCSAG00000015095) #18	PYGL (ENSCSAG00000015103) #19	ABHD12B (ENSCSAG00000015110) #20	NIN (ENSCSAG00000015122) #21	SAV1 (ENSCSAG00000015129) #22	ATL1 (ENSCSAG00000015138) #23	MAP4K5 (ENSCSAG00000015154) #24	CDKL1 (ENSCSAG00000015164) #25	DMAC2L (ENSCSAG00000015171) #26	L2HGDH (ENSCSAG00000015176) #27	SOS2 (ENSCSAG00000015182) #28	VCPKMT (ENSCSAG00000015192) #29	ENSCSAG00000015194	ARF6 (ENSCSAG00000019408) #30	ENSCSAG00000019407	NEMF (ENSCSAG00000015208) #31	KLHDC2 (ENSCSAG00000015231) #32	KLHDC1 (ENSCSAG00000015240) #33	POLE2 (ENSCSAG00000015257) #34	DNAAF2 (ENSCSAG00000015265) #35
Platyrrhini	ANCESTRAL SPECIES	4	ENSGT00940000164421	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00390000001424.sb	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517.e #16	ENSGT00940000155959.m.b #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Cebidae	ANCESTRAL SPECIES	3	ENSGT00940000154646.C.n.a.b	ENSGT00940000164421	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517.e #16	ENSGT00940000155959.m.b #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000161656 #36
Cebidae_a	ANCESTRAL SPECIES	31	ENSGT00390000006080 #10	ENSGT00940000154646.C.n.a.b	ENSGT00940000164421	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517.e #16	ENSGT00940000155959.m.b #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00940000161656 #36	ENSGT00940000158830 #37
Capuchin	MODERN SPECIES	358											TMX1 (ENSCCAG00000037586) #17	TRIM9 (ENSCCAG00000030695) #18	ABHD12B (ENSCCAG00000031225) #20	PYGL (ENSCCAG00000025739) #19	NIN (ENSCCAG00000023656) #21	SAV1 (ENSCCAG00000023542) #22	ATL1 (ENSCCAG00000036431) #23	MAP4K5 (ENSCCAG00000006140) #24	CDKL1 (ENSCCAG00000022172) #25	DMAC2L (ENSCCAG00000023996) #26	L2HGDH (ENSCCAG00000034590) #27	SOS2 (ENSCCAG00000023931) #28	VCPKMT (ENSCCAG00000024804) #29	ARF6 (ENSCCAG00000002381) #30	NEMF (ENSCCAG00000035752) #31	KLHDC2 (ENSCCAG00000028919) #32	KLHDC1 (ENSCCAG00000021565) #33	POLE2 (ENSCCAG00000036366) #34	DNAAF2 (ENSCCAG00000004405) #35	ENSCCAG00000013380 #36	LRR1 (ENSCCAG00000019678) #37
Bolivian squirrel monkey	MODERN SPECIES	80	GPR137C (ENSSBOG00000024278) #9	TXNDC16 (ENSSBOG00000022684) #10	ENSSBOG00000021939	PTGER2 (ENSSBOG00000001804) #11	PTGDR (ENSSBOG00000031009) #12	NID2 (ENSSBOG00000023624) #13	ENSSBOG00000026584 #14	GNG2 (ENSSBOG00000028301) #15	FRMD6 (ENSSBOG00000023137) #16	ENSSBOG00000023315 #17	TRIM9 (ENSSBOG00000020908) #18	ENSSBOG00000029147	PYGL (ENSSBOG00000008590) #19	ABHD12B (ENSSBOG00000032718) #20	NIN (ENSSBOG00000033179) #21	SAV1 (ENSSBOG00000026490) #22	ATL1 (ENSSBOG00000021977) #23	MAP4K5 (ENSSBOG00000033531) #24	CDKL1 (ENSSBOG00000023817) #25	DMAC2L (ENSSBOG00000004361) #26	L2HGDH (ENSSBOG00000034119) #27	SOS2 (ENSSBOG00000027880) #28	VCPKMT (ENSSBOG00000027755) #29	ARF6 (ENSSBOG00000004103) #30	NEMF (ENSSBOG00000035900) #31	KLHDC2 (ENSSBOG00000009647) #32	KLHDC1 (ENSSBOG00000018788) #33	POLE2 (ENSSBOG00000033545) #34	DNAAF2 (ENSSBOG00000033917) #35	RPL36AL (ENSSBOG00000018012) #36	LRR1 (ENSSBOG00000034749) #37
Marmoset	MODERN SPECIES	1	RTRAF (ENSCJAG00000006926) #14	GNG2 (ENSCJAG00000085121) #15	ENSCJAG00000073760	ENSCJAG00000074761	FRMD6 (ENSCJAG00000006907) #16	ENSCJAG00000076706	ENSCJAG00000082915	ENSCJAG00000042060	TMX1 (ENSCJAG00000048070) #17	TRIM9 (ENSCJAG00000039388) #18	ENSCJAG00000085893	ABHD12B (ENSCJAG00000006780) #20	PYGL (ENSCJAG00000006807) #19	NIN (ENSCJAG00000006611) #21	ENSCJAG00000006608	SAV1 (ENSCJAG00000006590) #22	ATL1 (ENSCJAG00000006480) #23	MAP4K5 (ENSCJAG00000006357) #24	ENSCJAG00000080862	CDKL1 (ENSCJAG00000006334) #25	ENSCJAG00000083459	DMAC2L (ENSCJAG00000006325) #26	L2HGDH (ENSCJAG00000006308) #27	ENSCJAG00000073385	ENSCJAG00000086453	ENSCJAG00000070792	SOS2 (ENSCJAG00000006256) #28	VCPKMT (ENSCJAG00000057893) #29	ARF6 (ENSCJAG00000039337) #30	NEMF (ENSCJAG00000006093) #31	KLHDC2 (ENSCJAG00000006021) #32
Mas night monkey	MODERN SPECIES	1263															NIN (ENSANAG00000031916) #21	SAV1 (ENSANAG00000028284) #22	ATL1 (ENSANAG00000027795) #23	MAP4K5 (ENSANAG00000028658) #24	CDKL1 (ENSANAG00000032697) #25	DMAC2L (ENSANAG00000030024) #26	ENSANAG00000032284	L2HGDH (ENSANAG00000030355) #27	SOS2 (ENSANAG00000019050) #28	VCPKMT (ENSANAG00000007501) #29	ARF6 (ENSANAG00000017264) #30	NEMF (ENSANAG00000021820) #31	KLHDC2 (ENSANAG00000019065) #32	KLHDC1 (ENSANAG00000036333) #33	POLE2 (ENSANAG00000024494) #34	DNAAF2 (ENSANAG00000031647) #35	RPL36AL (ENSANAG00000019555) #36
Tarsier	MODERN SPECIES	7202															ENSTSYG00000026369	SAV1 (ENSTSYG00000009287) #22	ATL1 (ENSTSYG00000009286) #23	MAP4K5 (ENSTSYG00000002543) #24	CDKL1 (ENSTSYG00000035834) #25	DMAC2L (ENSTSYG00000004271) #26	L2HGDH (ENSTSYG00000011947) #27	ENSTSYG00000000808	SOS2 (ENSTSYG00000000991) #28	VCPKMT (ENSTSYG00000000989) #29
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b.b
Lemuriformes	ANCESTRAL SPECIES	28	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00940000161656 #36	ENSGT00940000158830 #37
Lemuriformes_a	ANCESTRAL SPECIES	11	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00940000161656 #36	ENSGT00940000158830 #37
Coquerels sifaka	MODERN SPECIES	951	ENSPCOG00000028420	ERO1A (ENSPCOG00000013561) #8	GPR137C (ENSPCOG00000022406) #9	TXNDC16 (ENSPCOG00000017877) #10	PTGER2 (ENSPCOG00000008393) #11	PTGDR (ENSPCOG00000017384) #12	NID2 (ENSPCOG00000024641) #13	ENSPCOG00000024557 #14	GNG2 (ENSPCOG00000024111) #15	FRMD6 (ENSPCOG00000015723) #16	TMX1 (ENSPCOG00000009417) #17	TRIM9 (ENSPCOG00000017394) #18	PYGL (ENSPCOG00000019771) #19	ABHD12B (ENSPCOG00000024199) #20	NIN (ENSPCOG00000008345) #21	SAV1 (ENSPCOG00000017075) #22	ATL1 (ENSPCOG00000015429) #23	MAP4K5 (ENSPCOG00000016345) #24	CDKL1 (ENSPCOG00000023543) #25	DMAC2L (ENSPCOG00000014032) #26	L2HGDH (ENSPCOG00000028342) #27	SOS2 (ENSPCOG00000016272) #28	VCPKMT (ENSPCOG00000020609) #29	ARF6 (ENSPCOG00000000684) #30	NEMF (ENSPCOG00000013328) #31	KLHDC2 (ENSPCOG00000027810) #32	ENSPCOG00000013951 #33	POLE2 (ENSPCOG00000027285) #34	ENSPCOG00000008650	DNAAF2 (ENSPCOG00000022293) #35	ENSPCOG00000012793 #36
Greater bamboo lemur	MODERN SPECIES	73	ERO1A (ENSPSMG00000009431) #8	GPR137C (ENSPSMG00000009448) #9	TXNDC16 (ENSPSMG00000009469) #10	PTGER2 (ENSPSMG00000009484) #11	PTGDR (ENSPSMG00000009488) #12	NID2 (ENSPSMG00000009543) #13	RTRAF (ENSPSMG00000009585) #14	GNG2 (ENSPSMG00000009624) #15	FRMD6 (ENSPSMG00000009652) #16	TMX1 (ENSPSMG00000009690) #17	TRIM9 (ENSPSMG00000009733) #18	ENSPSMG00000009750	PYGL (ENSPSMG00000009996) #19	ABHD12B (ENSPSMG00000010272) #20	NIN (ENSPSMG00000010814) #21	SAV1 (ENSPSMG00000011298) #22	ATL1 (ENSPSMG00000011343) #23	ENSPSMG00000011369	ENSPSMG00000011372	GALNT5 (ENSPSMG00000011385)	ERMN (ENSPSMG00000011391)	CYTIP (ENSPSMG00000011400)	ACVR1C (ENSPSMG00000011454)	ENSPSMG00000011461	ACVR1 (ENSPSMG00000011476)	UPP2 (ENSPSMG00000011492)	CCDC148 (ENSPSMG00000011519)	PKP4 (ENSPSMG00000011897)	ENSPSMG00000012306	TANC1 (ENSPSMG00000012357)	WDSUB1 (ENSPSMG00000012415)
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	22	PSMC6 (ENSMICG00000034788) #7	ERO1A (ENSMICG00000015907) #8	GPR137C (ENSMICG00000038116) #9	TXNDC16 (ENSMICG00000003453) #10	PTGER2 (ENSMICG00000036646) #11	PTGDR (ENSMICG00000034390) #12	NID2 (ENSMICG00000008734) #13	ENSMICG00000008720 #14	GNG2 (ENSMICG00000036131) #15	FRMD6 (ENSMICG00000035237) #16	TMX1 (ENSMICG00000008688) #17	TRIM9 (ENSMICG00000013634) #18	ABHD12B (ENSMICG00000013597) #20	PYGL (ENSMICG00000013608) #19	NIN (ENSMICG00000013569) #21	ENSMICG00000005455 #22	ATL1 (ENSMICG00000005443) #23	MAP4K5 (ENSMICG00000015101) #24	CDKL1 (ENSMICG00000027499) #25	DMAC2L (ENSMICG00000037018) #26	L2HGDH (ENSMICG00000013196) #27	SOS2 (ENSMICG00000017573) #28	VCPKMT (ENSMICG00000017572) #29	ARF6 (ENSMICG00000047517) #30	NEMF (ENSMICG00000026600) #31	KLHDC2 (ENSMICG00000007045) #32	KLHDC1 (ENSMICG00000005617) #33	POLE2 (ENSMICG00000005594) #34	DNAAF2 (ENSMICG00000030317) #35	ENSMICG00000042436 #36	LRR1 (ENSMICG00000033385) #37
Mouse lemur	MODERN SPECIES	169	ENSMICG00000027784	ENSMICG00000028954	ENSMICG00000005523	ENSMICG00000006392	ENSMICG00000042750	ENSMICG00000047186	ZIC3 (ENSMICG00000042529)	ENSMICG00000029803	ENSMICG00000028289	RBMX (ENSMICG00000006856)	ARHGEF6 (ENSMICG00000017848)	CD40LG (ENSMICG00000017847)	HTATSF1 (ENSMICG00000009348)	BRS3 (ENSMICG00000047770)	SPIN4 (ENSMICG00000033616)	ENSMICG00000037905 #22	ENSMICG00000029540	ENSMICG00000006648	ENSMICG00000044069	NBDY (ENSMICG00000036898)	ENSMICG00000042349	UBQLN2 (ENSMICG00000027033)	KLF8 (ENSMICG00000001146)	TKTL1 (ENSMICG00000035660)	ENSMICG00000011536	MECP2 (ENSMICG00000005149)	IRAK1 (ENSMICG00000005136)	TMEM187 (ENSMICG00000033392)	HCFC1 (ENSMICG00000016286)	RENBP (ENSMICG00000033869)	NAA10 (ENSMICG00000010278)
Bushbaby	MODERN SPECIES	169	PSMC6 (ENSOGAG00000010011) #7	ERO1A (ENSOGAG00000010005) #8	GPR137C (ENSOGAG00000010004) #9	TXNDC16 (ENSOGAG00000033702) #10	PTGER2 (ENSOGAG00000024889) #11	PTGDR (ENSOGAG00000024123) #12	NID2 (ENSOGAG00000013237) #13	RTRAF (ENSOGAG00000013232) #14	GNG2 (ENSOGAG00000006566) #15	FRMD6 (ENSOGAG00000007080) #16	TMX1 (ENSOGAG00000006427) #17	TRIM9 (ENSOGAG00000014312) #18	PYGL (ENSOGAG00000014307) #19	ABHD12B (ENSOGAG00000014306) #20	NIN (ENSOGAG00000014299) #21	SAV1 (ENSOGAG00000034521) #22	ATL1 (ENSOGAG00000014295) #23	MAP4K5 (ENSOGAG00000010934) #24	CDKL1 (ENSOGAG00000014294) #25	DMAC2L (ENSOGAG00000014289) #26	L2HGDH (ENSOGAG00000014286) #27	SOS2 (ENSOGAG00000014279) #28	VCPKMT (ENSOGAG00000014277) #29	ARF6 (ENSOGAG00000016339) #30	NEMF (ENSOGAG00000016330) #31	KLHDC2 (ENSOGAG00000016325) #32	KLHDC1 (ENSOGAG00000016320) #33	POLE2 (ENSOGAG00000013230) #34	DNAAF2 (ENSOGAG00000028257) #35	MGAT2 (ENSOGAG00000013227)	ENSOGAG00000013226
Atlantogenata	ANCESTRAL SPECIES	8	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b
Xenarthra	ANCESTRAL SPECIES	173					ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29
Armadillo	MODERN SPECIES	1123				PTGER2 (ENSDNOG00000041288) #11	PTGDR (ENSDNOG00000003560) #12	NID2 (ENSDNOG00000003255) #13	RTRAF (ENSDNOG00000003248) #14	ENSDNOG00000036731 #15	FRMD6 (ENSDNOG00000032176) #16	ENSDNOG00000036385	TMX1 (ENSDNOG00000044818) #17	TRIM9 (ENSDNOG00000017814) #18	PYGL (ENSDNOG00000017810) #19	ABHD12B (ENSDNOG00000017805) #20	NIN (ENSDNOG00000025188) #21	SAV1 (ENSDNOG00000040347) #22	ATL1 (ENSDNOG00000007585) #23	MAP4K5 (ENSDNOG00000007562) #24	CDKL1 (ENSDNOG00000038306) #25	DMAC2L (ENSDNOG00000004480) #26	L2HGDH (ENSDNOG00000003155) #27	SOS2 (ENSDNOG00000013500) #28	VCPKMT (ENSDNOG00000013492) #29
Sloth	MODERN SPECIES	7383																SAV1 (ENSCHOG00000003534) #22	ATL1 (ENSCHOG00000003523) #23
Afrotheria	ANCESTRAL SPECIES	6	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b
Afrotheria_a	ANCESTRAL SPECIES	6	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00390000018085.a.a.a.b
Elephant	MODERN SPECIES	602	PSMC6 (ENSLAFG00000014825) #7	ERO1A (ENSLAFG00000004278) #8	GPR137C (ENSLAFG00000004274) #9	TXNDC16 (ENSLAFG00000004272) #10	PTGER2 (ENSLAFG00000027078) #11	PTGDR (ENSLAFG00000009971) #12	NID2 (ENSLAFG00000003163) #13	RTRAF (ENSLAFG00000003162) #14	GNG2 (ENSLAFG00000003156) #15	FRMD6 (ENSLAFG00000017794) #16	TMX1 (ENSLAFG00000013251) #17	TRIM9 (ENSLAFG00000010397) #18	PYGL (ENSLAFG00000015416) #19	ABHD12B (ENSLAFG00000015414) #20	ENSLAFG00000029122 #21	SAV1 (ENSLAFG00000013815) #22	ATL1 (ENSLAFG00000013808) #23	MAP4K5 (ENSLAFG00000013799) #24	CDKL1 (ENSLAFG00000013780) #25	DMAC2L (ENSLAFG00000013773) #26	L2HGDH (ENSLAFG00000013769) #27	SOS2 (ENSLAFG00000008810) #28	VCPKMT (ENSLAFG00000021497) #29	ARF6 (ENSLAFG00000004279) #30	NEMF (ENSLAFG00000003434) #31	KLHDC2 (ENSLAFG00000003431) #32	KLHDC1 (ENSLAFG00000003427) #33	POLE2 (ENSLAFG00000003424) #34	DNAAF2 (ENSLAFG00000003422) #35	MGAT2 (ENSLAFG00000003420)	ENSLAFG00000003419
Hyrax	MODERN SPECIES	6969																SAV1 (ENSPCAG00000011605) #22	ATL1 (ENSPCAG00000011486) #23
Tenrec	MODERN SPECIES	8262															NIN (ENSETEG00000008023) #21	SAV1 (ENSETEG00000008021) #22	ATL1 (ENSETEG00000008018) #23
Marsupialia	ANCESTRAL SPECIES		ENSGT00390000013444.a.a	ENSGT00390000008666	ENSGT00940000154859	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT00940000155517 #16	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158296
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000157120	ENSGT00940000158275	ENSGT00950000182808.a.a.b.a	ENSGT00940000154720	ENSGT00940000158830 #37	ENSGT00390000007341.a	ENSGT00510000048466 #35	ENSGT00390000012435 #34	ENSGT00940000157509 #33	ENSGT00940000157150 #32	ENSGT00390000018516 #31	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158296	ENSGT00940000155369.A	ENSGT00940000154940	ENSGT00390000001332
Diprotodontia	ANCESTRAL SPECIES	65	ENSGT00940000157120	ENSGT00940000158275	ENSGT00950000182808.a.a.b.a	ENSGT00940000154720	ENSGT00940000158830 #37	ENSGT00390000007341.a	ENSGT00510000048466 #35	ENSGT00390000012435 #34	ENSGT00940000157509 #33	ENSGT00940000157150 #32	ENSGT00390000018516 #31	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158296	ENSGT00940000155369.A	ENSGT00940000154940	ENSGT00390000002766.b.b.m
Diprotodontia_a	ANCESTRAL SPECIES	62	ENSGT00940000157120	ENSGT00940000158275	ENSGT00950000182808.a.a.b.a	ENSGT00940000154720	ENSGT00940000158830 #37	ENSGT00390000007341.a	ENSGT00510000048466 #35	ENSGT00390000012435 #34	ENSGT00940000157509 #33	ENSGT00940000157150 #32	ENSGT00390000018516 #31	ENSGT00390000004717.f	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158296	ENSGT00940000155369.A	ENSGT00940000154940	ENSGT00390000002766.b.b.m
koala	MODERN SPECIES	105	SUSD6 (ENSPCIG00000011870)	SRSF5 (ENSPCIG00000011877)	SLC10A1 (ENSPCIG00000011880)	ENSPCIG00000034318	LRR1 (ENSPCIG00000011885) #37	MGAT2 (ENSPCIG00000011889)	ENSPCIG00000011887 #35	POLE2 (ENSPCIG00000011901) #34	KLHDC1 (ENSPCIG00000012308) #33	KLHDC2 (ENSPCIG00000012310) #32	NEMF (ENSPCIG00000015034) #31	ENSPCIG00000012313	ENSPCIG00000012314	GMFB (ENSPCIG00000012315)	ENSPCIG00000012321 #21	SAV1 (ENSPCIG00000012324) #22	ATL1 (ENSPCIG00000012325) #23	LRFN5 (ENSPCIG00000012328)	MDGA2 (ENSPCIG00000012334)	SNX6 (ENSPCIG00000009058)	ENSPCIG00000037042	EAPP (ENSPCIG00000018355)	ENSPCIG00000018357	ENSPCIG00000033208	ENSPCIG00000024435
Wallaby	MODERN SPECIES	9893																SAV1 (ENSMEUG00000006388) #22	ATL1 (ENSMEUG00000006367) #23
Tasmanian devil	MODERN SPECIES	1	SEC23A (ENSSHAG00000002822)	SSTR1 (ENSSHAG00000003463)	ENSSHAG00000025817	FOXA1 (ENSSHAG00000001593)	ENSSHAG00000029995	ENSSHAG00000005531	ENSSHAG00000024428	ENSSHAG00000005447	PRORP (ENSSHAG00000004793)	PPP2R3C (ENSSHAG00000004348)	ENSSHAG00000023976	ENSSHAG00000000671	ENSSHAG00000001967	ENSSHAG00000025205 #17	ENSSHAG00000000762 #21	ENSSHAG00000002053 #22	ENSSHAG00000003890 #23	ENSSHAG00000024873	ENSSHAG00000003743	ENSSHAG00000003214	ENSSHAG00000028625	ENSSHAG00000030048	ENSSHAG00000031274	ENSSHAG00000002490	ENSSHAG00000023080	ENSSHAG00000031263	ENSSHAG00000029628	ENSSHAG00000024941	ENSSHAG00000000466	ENSSHAG00000000457	ENSSHAG00000022138
Opossum	MODERN SPECIES		ENSMODG00000012019	FOXA1 (ENSMODG00000012030)	ENSMODG00000042630	MIPOL1 (ENSMODG00000012043)	ENSMODG00000023912	ENSMODG00000013225 #13	RTRAF (ENSMODG00000013211) #14	FRMD6 (ENSMODG00000013207) #16	ENSMODG00000013198	TMX1 (ENSMODG00000013196) #17	ENSMODG00000038734	ENSMODG00000023910	TRIM9 (ENSMODG00000013160) #18	PYGL (ENSMODG00000013150) #19	NIN (ENSMODG00000013128) #21	SAV1 (ENSMODG00000013105) #22	ENSMODG00000048956	ATL1 (ENSMODG00000013099) #23	LRFN5 (ENSMODG00000013085)	MDGA2 (ENSMODG00000013060)	FERMT2 (ENSMODG00000013030)	DDHD1 (ENSMODG00000013016)	ENSMODG00000051444	ENSMODG00000039440	BMP4 (ENSMODG00000012951)	ENSMODG00000025310	ENSMODG00000049664	ENSMODG00000038654	ENSMODG00000044246	ENSMODG00000012949	BAZ1A (ENSMODG00000012946)
Platypus	MODERN SPECIES	5	PSMC6 (ENSOANG00000010826) #7	ERO1A (ENSOANG00000039717) #8	GPR137C (ENSOANG00000013954) #9	TXNDC16 (ENSOANG00000013956) #10	PTGER2 (ENSOANG00000013955) #11	PTGDR (ENSOANG00000044792) #12	NID2 (ENSOANG00000013959) #13	RTRAF (ENSOANG00000013960) #14	GNG2 (ENSOANG00000013961) #15	FRMD6 (ENSOANG00000013962) #16	TMX1 (ENSOANG00000013964) #17	TRIM9 (ENSOANG00000013965) #18	PYGL (ENSOANG00000013967) #19	ABHD12B (ENSOANG00000013968) #20	ENSOANG00000038501 #21	SAV1 (ENSOANG00000038228) #22	ATL1 (ENSOANG00000013972) #23	MAP4K5 (ENSOANG00000013975) #24	CDKL1 (ENSOANG00000050640) #25	DMAC2L (ENSOANG00000013977) #26	L2HGDH (ENSOANG00000013978) #27	SOS2 (ENSOANG00000013979) #28	VCPKMT (ENSOANG00000013981) #29	ARF6 (ENSOANG00000041983) #30	NEMF (ENSOANG00000013983) #31	KLHDC2 (ENSOANG00000013987) #32	KLHDC1 (ENSOANG00000013988) #33	POLE2 (ENSOANG00000013989) #34	ENSOANG00000013991 #35	MGAT2 (ENSOANG00000013993)	LRR1 (ENSOANG00000013994) #37
Sauria	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Lepidosauria	ANCESTRAL SPECIES	32	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000167703	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Episquamata	ANCESTRAL SPECIES		ENSGT00940000157901 #13	ENSGT01050000244902.b.c.b #12	ENSGT01050000244902.b.c.a #11	ENSGT00390000006080 #10	ENSGT00940000153986.a #9	ENSGT00390000007753.b #8	ENSGT01020000230346.A #7	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000157901 #13	ENSGT01050000244902.b.c.b #12	ENSGT01050000244902.b.c.a #11	ENSGT00390000006080 #10	ENSGT00940000153986.a #9	ENSGT00390000007753.b #8	ENSGT01020000230346.A #7	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000166415	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Common wall lizard	MODERN SPECIES		TXNDC16 (ENSPMRG00000001308) #10	GPR137C (ENSPMRG00000001267) #9	ERO1A (ENSPMRG00000001204) #8	PSMC6 (ENSPMRG00000001032) #7	STYX (ENSPMRG00000000867)	GNPNAT1 (ENSPMRG00000000832)	ENSPMRG00000000814	FERMT2 (ENSPMRG00000000741)	DDHD1 (ENSPMRG00000000465)	ENSPMRG00000000316	TRIM9 (ENSPMRG00000000204) #18	PYGL (ENSPMRG00000000088) #19	ENSPMRG00000000083	ENSPMRG00000000081	NIN (ENSPMRG00000000075) #21	SAV1 (ENSPMRG00000000068) #22	ATL1 (ENSPMRG00000000067) #23	MAP4K5 (ENSPMRG00000000042) #24	CDKL1 (ENSPMRG00000000041) #25	SOS2 (ENSPMRG00000000040) #28	VCPKMT (ENSPMRG00000000039) #29	ARF6 (ENSPMRG00000000038) #30	NEMF (ENSPMRG00000000037) #31	KLHDC2 (ENSPMRG00000000036) #32	KLHDC1 (ENSPMRG00000000035) #33	ENSPMRG00000000034	POLE2 (ENSPMRG00000000033) #34	DNAAF2 (ENSPMRG00000000032) #35	MGAT2 (ENSPMRG00000000031)	LRR1 (ENSPMRG00000000030) #37	RPS29 (ENSPMRG00000000028)
Argentine black and white tegu	MODERN SPECIES	39	PTGDR (ENSSMRG00000009465) #12	PTGER2 (ENSSMRG00000009463) #11	TXNDC16 (ENSSMRG00000009442) #10	ENSSMRG00000009441	GPR137C (ENSSMRG00000009440) #9	ERO1A (ENSSMRG00000009436) #8	PSMC6 (ENSSMRG00000009431) #7	STYX (ENSSMRG00000009425)	GNPNAT1 (ENSSMRG00000009424)	FERMT2 (ENSSMRG00000009422)	DDHD1 (ENSSMRG00000009415)	TRIM9 (ENSSMRG00000009411) #18	PYGL (ENSSMRG00000009410) #19	ENSSMRG00000009409	NIN (ENSSMRG00000009405) #21	SAV1 (ENSSMRG00000009404) #22	ATL1 (ENSSMRG00000009403) #23	MAP4K5 (ENSSMRG00000009387) #24	CDKL1 (ENSSMRG00000009384) #25	DMAC2L (ENSSMRG00000009383) #26	L2HGDH (ENSSMRG00000009381) #27	SOS2 (ENSSMRG00000008704) #28	VCPKMT (ENSSMRG00000008692) #29	ARF6 (ENSSMRG00000008691) #30	ENSSMRG00000008689	ENSSMRG00000008686	NEMF (ENSSMRG00000008451) #31	KLHDC2 (ENSSMRG00000008441) #32	KLHDC1 (ENSSMRG00000008435) #33	POLE2 (ENSSMRG00000007995) #34	DNAAF2 (ENSSMRG00000007990) #35
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00940000157901 #13	ENSGT01050000244902.b.c.b #12	ENSGT01050000244902.b.c.a #11	ENSGT00390000006080 #10	ENSGT00940000153986.a #9	ENSGT00390000007753.b #8	ENSGT01020000230346.A #7	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466.p #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Lizard	MODERN SPECIES	176																ENSACAG00000043975 #22
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000157901 #13	ENSGT01050000244902.b.c.b #12	ENSGT01050000244902.b.c.a #11	ENSGT00390000006080 #10	ENSGT00940000153986.a #9	ENSGT00390000007753.b #8	ENSGT01020000230346.A #7	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065.m	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466.p #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00940000157901 #13	ENSGT01050000244902.b.c.b #12	ENSGT01050000244902.b.c.a #11	ENSGT00390000006080 #10	ENSGT00940000153986.a #9	ENSGT00390000007753.b #8	ENSGT01020000230346.A #7	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065.m	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466.p #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00940000157901 #13	ENSGT01050000244902.b.c.b #12	ENSGT01050000244902.b.c.a #11	ENSGT00390000006080 #10	ENSGT00940000153986.a #9	ENSGT00390000007753.b #8	ENSGT01020000230346.A #7	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065.m	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466.p #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Eastern brown snake	MODERN SPECIES	10	RTRAF (ENSPTXG00000001521) #14	NID2 (ENSPTXG00000001559) #13	PTGER2 (ENSPTXG00000002045) #11	TXNDC16 (ENSPTXG00000002048) #10	GPR137C (ENSPTXG00000002051) #9	ERO1A (ENSPTXG00000002054) #8	PSMC6 (ENSPTXG00000002059) #7	STYX (ENSPTXG00000002065)	GNPNAT1 (ENSPTXG00000002068)	FERMT2 (ENSPTXG00000002071)	DDHD1 (ENSPTXG00000002074)	TRIM9 (ENSPTXG00000002081) #18	PYGL (ENSPTXG00000002336) #19	ABHD12B (ENSPTXG00000002342) #20	NIN (ENSPTXG00000002345) #21	SAV1 (ENSPTXG00000002346) #22	ATL1 (ENSPTXG00000002347) #23	MAP4K5 (ENSPTXG00000002350) #24	CDKL1 (ENSPTXG00000002359) #25	DMAC2L (ENSPTXG00000002363) #26	L2HGDH (ENSPTXG00000002366) #27	SOS2 (ENSPTXG00000002372) #28	VCPKMT (ENSPTXG00000002380) #29	ARF6 (ENSPTXG00000002383) #30	NEMF (ENSPTXG00000002387) #31	KLHDC2 (ENSPTXG00000002390) #32	KLHDC1 (ENSPTXG00000002394) #33	POLE2 (ENSPTXG00000002402) #34	DNAAF2 (ENSPTXG00000002440) #35	MGAT2 (ENSPTXG00000002441)	LRR1 (ENSPTXG00000002443) #37
Mainland tiger snake	MODERN SPECIES	35	PTGDR (ENSNSUG00000013664) #12	PTGER2 (ENSNSUG00000013685) #11	ENSNSUG00000013686	TXNDC16 (ENSNSUG00000013687) #10	GPR137C (ENSNSUG00000013688) #9	ERO1A (ENSNSUG00000013699) #8	PSMC6 (ENSNSUG00000013701) #7	STYX (ENSNSUG00000013703)	GNPNAT1 (ENSNSUG00000013705)	FERMT2 (ENSNSUG00000013713)	DDHD1 (ENSNSUG00000014509)	TRIM9 (ENSNSUG00000014929) #18	PYGL (ENSNSUG00000015077) #19	ABHD12B (ENSNSUG00000015078) #20	NIN (ENSNSUG00000015079) #21	SAV1 (ENSNSUG00000015080) #22	ATL1 (ENSNSUG00000015098) #23	MAP4K5 (ENSNSUG00000015099) #24	CDKL1 (ENSNSUG00000015100) #25	DMAC2L (ENSNSUG00000015101) #26	L2HGDH (ENSNSUG00000015102) #27	SOS2 (ENSNSUG00000015117) #28	VCPKMT (ENSNSUG00000015118) #29	ARF6 (ENSNSUG00000015119) #30	NEMF (ENSNSUG00000015120) #31	KLHDC2 (ENSNSUG00000015219) #32	POLE2 (ENSNSUG00000015220) #34	DNAAF2 (ENSNSUG00000015221) #35	MGAT2 (ENSNSUG00000015222)	LRR1 (ENSNSUG00000015223) #37	ENSNSUG00000015224
Blue-lipped sea krait	MODERN SPECIES	5401															NIN (ENSLLTG00000003304) #21	SAV1 (ENSLLTG00000003118) #22	ATL1 (ENSLLTG00000003105) #23
Indian cobra	MODERN SPECIES		RTRAF (ENSNNAG00000006060) #14	NID2 (ENSNNAG00000006085) #13	PTGDR (ENSNNAG00000006153) #12	PTGER2 (ENSNNAG00000006253) #11	TXNDC16 (ENSNNAG00000006277) #10	GPR137C (ENSNNAG00000006364) #9	ERO1A (ENSNNAG00000006395) #8	PSMC6 (ENSNNAG00000006689) #7	STYX (ENSNNAG00000006758)	GNPNAT1 (ENSNNAG00000006823)	FERMT2 (ENSNNAG00000006858)	DDHD1 (ENSNNAG00000006959)	TRIM9 (ENSNNAG00000007073) #18	PYGL (ENSNNAG00000007306) #19	NIN (ENSNNAG00000007415) #21	SAV1 (ENSNNAG00000007524) #22	ATL1 (ENSNNAG00000007571) #23	MAP4K5 (ENSNNAG00000007858) #24	CDKL1 (ENSNNAG00000007960) #25	DMAC2L (ENSNNAG00000008001) #26	L2HGDH (ENSNNAG00000008044) #27	SOS2 (ENSNNAG00000008384) #28	VCPKMT (ENSNNAG00000008521) #29	ARF6 (ENSNNAG00000008559) #30	NEMF (ENSNNAG00000008606) #31	KLHDC2 (ENSNNAG00000009372) #32	KLHDC1 (ENSNNAG00000009462) #33	POLE2 (ENSNNAG00000009565) #34	DNAAF2 (ENSNNAG00000009651) #35	MGAT2 (ENSNNAG00000009680)	LRR1 (ENSNNAG00000009691) #37
tuatara	MODERN SPECIES	1105					PTGER2 (ENSSPUG00000003776) #11	ENSSPUG00000003751 #13	RTRAF (ENSSPUG00000003746) #14	GNG2 (ENSSPUG00000003743) #15	FRMD6 (ENSSPUG00000003735) #16	TMX1 (ENSSPUG00000003725) #17	TRIM9 (ENSSPUG00000003587) #18	PYGL (ENSSPUG00000003526) #19	ENSSPUG00000003520	ENSSPUG00000003513 #21	ENSSPUG00000003441 #21	SAV1 (ENSSPUG00000003429) #22	ATL1 (ENSSPUG00000003398) #23	MAP4K5 (ENSSPUG00000003372) #24	EBP (ENSSPUG00000003326)	CDKL1 (ENSSPUG00000003310) #25	DMAC2L (ENSSPUG00000003295) #26	L2HGDH (ENSSPUG00000003218) #27
Archelosauria	ANCESTRAL SPECIES	2	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Cryptodira	ANCESTRAL SPECIES	38	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00800000125246	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000167703	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Testudinidae	ANCESTRAL SPECIES	43	ENSGT00940000154859	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Goode s thornscrub tortoise	MODERN SPECIES	18	PSMC6 (ENSGEVG00005001486) #7	ERO1A (ENSGEVG00005001456) #8	ENSGEVG00005001431 #9	ENSGEVG00005001416 #9	TXNDC16 (ENSGEVG00005001328) #10	PTGER2 (ENSGEVG00005001289) #11	PTGDR (ENSGEVG00005001240) #12	ENSGEVG00005001206 #13	RTRAF (ENSGEVG00005001188) #14	GNG2 (ENSGEVG00005001177) #15	FRMD6 (ENSGEVG00005001149) #16	TMX1 (ENSGEVG00005001071) #17	TRIM9 (ENSGEVG00005000958) #18	PYGL (ENSGEVG00005000849) #19	NIN (ENSGEVG00005000742) #21	SAV1 (ENSGEVG00005000683) #22	ENSGEVG00005000649 #23	ENSGEVG00005000638 #23	ENSGEVG00005000618 #23	MAP4K5 (ENSGEVG00005000524) #24	CDKL1 (ENSGEVG00005000476) #25	DMAC2L (ENSGEVG00005000443) #26	L2HGDH (ENSGEVG00005000420) #27	SOS2 (ENSGEVG00005000378) #28	VCPKMT (ENSGEVG00005000350) #29	ARF6 (ENSGEVG00005000334) #30	ENSGEVG00005003966	NEMF (ENSGEVG00005003871) #31	KLHDC2 (ENSGEVG00005003846) #32	KLHDC1 (ENSGEVG00005003825) #33	POLE2 (ENSGEVG00005003788) #34
Abingdon island giant tortoise	MODERN SPECIES	32													TRIM9 (ENSCABG00000015977) #18	PYGL (ENSCABG00000016038) #19	NIN (ENSCABG00000019334) #21	SAV1 (ENSCABG00000019345) #22	ATL1 (ENSCABG00000019349) #23	MAP4K5 (ENSCABG00000019384) #24	CDKL1 (ENSCABG00000020002) #25	DMAC2L (ENSCABG00000020004) #26	L2HGDH (ENSCABG00000020011) #27	SOS2 (ENSCABG00000020031) #28
Emydidae	ANCESTRAL SPECIES	43	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
painted turtle	MODERN SPECIES	707							ENSCPBG00000023381	MAP4K5 (ENSCPBG00000023375) #24	CDKL1 (ENSCPBG00000023371) #25	DMAC2L (ENSCPBG00000023368) #26	L2HGDH (ENSCPBG00000023367) #27	SOS2 (ENSCPBG00000023364) #28	VCPKMT (ENSCPBG00000023363) #29	ARF6 (ENSCPBG00000023360) #30	NIN (ENSCPBG00000022306) #21	SAV1 (ENSCPBG00000022237) #22	ATL1 (ENSCPBG00000021641) #23	CDH12 (ENSCPBG00000021612)	DDHD1 (ENSCPBG00000021551)	FERMT2 (ENSCPBG00000021550)	GNPNAT1 (ENSCPBG00000021547)	STYX (ENSCPBG00000021546)	PSMC6 (ENSCPBG00000021545) #7	ERO1A (ENSCPBG00000021543) #8	GPR137C (ENSCPBG00000021541) #9	TXNDC16 (ENSCPBG00000021540) #10	PTGER2 (ENSCPBG00000021532) #11	PTGDR (ENSCPBG00000021519) #12	NID2 (ENSCPBG00000021197) #13	RTRAF (ENSCPBG00000021143) #14	GNG2 (ENSCPBG00000021140) #15
Three-toed box turtle	MODERN SPECIES	87	PSMC6 (ENSTMTG00000020575) #7	ERO1A (ENSTMTG00000020584) #8	GPR137C (ENSTMTG00000020606) #9	TXNDC16 (ENSTMTG00000020611) #10	ENSTMTG00000020624	PTGDR (ENSTMTG00000020630) #12	NID2 (ENSTMTG00000020636) #13	RTRAF (ENSTMTG00000020661) #14	GNG2 (ENSTMTG00000020671) #15	FRMD6 (ENSTMTG00000020675) #16	TMX1 (ENSTMTG00000020689) #17	ENSTMTG00000020699	PYGL (ENSTMTG00000020705) #19	ENSTMTG00000002994	NIN (ENSTMTG00000003083) #21	SAV1 (ENSTMTG00000003457) #22	ATL1 (ENSTMTG00000003503) #23	MAP4K5 (ENSTMTG00000003665) #24	CDKL1 (ENSTMTG00000003734) #25	DMAC2L (ENSTMTG00000003758) #26	L2HGDH (ENSTMTG00000003771) #27	SOS2 (ENSTMTG00000003922) #28	VCPKMT (ENSTMTG00000005588) #29	ARF6 (ENSTMTG00000005604) #30	NEMF (ENSTMTG00000005627) #31	KLHDC2 (ENSTMTG00000005753) #32	KLHDC1 (ENSTMTG00000005810) #33	POLE2 (ENSTMTG00000006153) #34	DNAAF2 (ENSTMTG00000006837) #35	MGAT2 (ENSTMTG00000006852)	LRR1 (ENSTMTG00000006880) #37
Chinese turtle	MODERN SPECIES	527															ENSPSIG00000005109	SAV1 (ENSPSIG00000005122) #22	ATL1 (ENSPSIG00000005130) #23	MAP4K5 (ENSPSIG00000005430) #24	CDKL1 (ENSPSIG00000005530) #25	DMAC2L (ENSPSIG00000005578) #26	L2HGDH (ENSPSIG00000005601) #27	ENSPSIG00000001734	SOS2 (ENSPSIG00000005611) #28	VCPKMT (ENSPSIG00000007026) #29	ARF6 (ENSPSIG00000001737) #30
Archosauria	ANCESTRAL SPECIES	5	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Australian saltwater crocodile	MODERN SPECIES	64	ENSCPRG00005018715	GMFB (ENSCPRG00005018713)	CGRRF1 (ENSCPRG00005018711)	SAMD4A (ENSCPRG00005018693)	GCH1 (ENSCPRG00005018685)	WDHD1 (ENSCPRG00005018667)	SOCS4 (ENSCPRG00005018664)	ENSCPRG00005018662	GNG2 (ENSCPRG00005018659) #15	FRMD6 (ENSCPRG00005018656) #16	TMX1 (ENSCPRG00005018652) #17	TRIM9 (ENSCPRG00005018650) #18	PYGL (ENSCPRG00005018648) #19	ENSCPRG00005018643	NIN (ENSCPRG00005018527) #21	SAV1 (ENSCPRG00005018456) #22	ATL1 (ENSCPRG00005018434) #23	MAP4K5 (ENSCPRG00005018249) #24	CDKL1 (ENSCPRG00005018173) #25	DMAC2L (ENSCPRG00005018171) #26	L2HGDH (ENSCPRG00005018169) #27	SOS2 (ENSCPRG00005018117) #28	VCPKMT (ENSCPRG00005018092) #29	ARF6 (ENSCPRG00005018088) #30	ENSCPRG00005018084	SYT16 (ENSCPRG00005018082)	SNAPC1 (ENSCPRG00005018076)	HIF1A (ENSCPRG00005018074)	PRKCH (ENSCPRG00005018065)	SLC38A6 (ENSCPRG00005018056)	TRMT5 (ENSCPRG00005018050)
Aves	ANCESTRAL SPECIES	2	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
African ostrich	MODERN SPECIES	174			FERMT2 (ENSSCUG00000001509)	GNPNAT1 (ENSSCUG00000001493)	STYX (ENSSCUG00000001486)	PSMC6 (ENSSCUG00000001459) #7	ERO1A (ENSSCUG00000001434) #8	GPR137C (ENSSCUG00000001429) #9	TXNDC16 (ENSSCUG00000001425) #10	ENSSCUG00000001424	PTGER2 (ENSSCUG00000001423) #11	RTRAF (ENSSCUG00000001419) #14	GNG2 (ENSSCUG00000001415) #15	TRIM9 (ENSSCUG00000001402) #18	NIN (ENSSCUG00000001321) #21	SAV1 (ENSSCUG00000001285) #22	ATL1 (ENSSCUG00000001284) #23	MAP4K5 (ENSSCUG00000001274) #24	CDKL1 (ENSSCUG00000001268) #25	DMAC2L (ENSSCUG00000001267) #26	L2HGDH (ENSSCUG00000001265) #27	SOS2 (ENSSCUG00000001263) #28	VCPKMT (ENSSCUG00000001260) #29	ARF6 (ENSSCUG00000001255) #30	NEMF (ENSSCUG00000001238) #31	KLHDC2 (ENSSCUG00000001222) #32	KLHDC1 (ENSSCUG00000001215) #33	POLE2 (ENSSCUG00000001212) #34	ENSSCUG00000001211 #35	LRR1 (ENSSCUG00000001210) #37	ENSSCUG00000001204
Neognathae	ANCESTRAL SPECIES	4	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT01100000264601	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Galloanserae	ANCESTRAL SPECIES	4	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT01100000264601	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Anatidae	ANCESTRAL SPECIES	9	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT00960000189746	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT01100000264601	ENSGT00940000158072 #24	ENSGT00940000159132.a.g #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516.k #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Pink-footed goose	MODERN SPECIES	56	STYX (ENSABRG00000010577)	PSMC6 (ENSABRG00000010563) #7	ERO1A (ENSABRG00000010552) #8	GPR137C (ENSABRG00000010546) #9	TXNDC16 (ENSABRG00000010525) #10	PTGER2 (ENSABRG00000010514) #11	ENSABRG00000010504	NID2 (ENSABRG00000010043) #13	RTRAF (ENSABRG00000010003) #14	FRMD6 (ENSABRG00000009982) #16	TMX1 (ENSABRG00000009971) #17	TRIM9 (ENSABRG00000009948) #18	PYGL (ENSABRG00000009923) #19	ENSABRG00000009911	NIN (ENSABRG00000004508) #21	SAV1 (ENSABRG00000004029) #22	ATL1 (ENSABRG00000003944) #23	MAP4K5 (ENSABRG00000000528) #24	CDKL1 (ENSABRG00000014732) #25	DMAC2L (ENSABRG00000014715) #26	L2HGDH (ENSABRG00000014683) #27	SOS2 (ENSABRG00000013960) #28	VCPKMT (ENSABRG00000013875) #29	ARF6 (ENSABRG00000013867) #30	ENSABRG00000013855	NEMF (ENSABRG00000013666) #31	KLHDC2 (ENSABRG00000013425) #32	KLHDC1 (ENSABRG00000013360) #33	POLE2 (ENSABRG00000013252) #34	ENSABRG00000013234 #35	MGAT2 (ENSABRG00000013225)
Duck	MODERN SPECIES	23	ERO1A (ENSAPLG00000001303) #8	GPR137C (ENSAPLG00000001064) #9	TXNDC16 (ENSAPLG00000014927) #10	NID2 (ENSAPLG00000026347) #13	PTGER2 (ENSAPLG00000026085) #11	ENSAPLG00000030957	RTRAF (ENSAPLG00000016032) #14	GNG2 (ENSAPLG00000022444) #15	ENSAPLG00000021241	FRMD6 (ENSAPLG00000017328) #16	TMX1 (ENSAPLG00000025218) #17	TRIM9 (ENSAPLG00000016305) #18	PYGL (ENSAPLG00000016327) #19	ENSAPLG00000002445	NIN (ENSAPLG00000002459) #21	SAV1 (ENSAPLG00000003206) #22	ATL1 (ENSAPLG00000003351) #23	ENSAPLG00000025401	ENSAPLG00000029510	MAP4K5 (ENSAPLG00000003947) #24	ENSAPLG00000017746 #25	ENSAPLG00000030510 #25	SOS2 (ENSAPLG00000005327) #28	VCPKMT (ENSAPLG00000005825) #29	ENSAPLG00000005844 #31	KLHDC2 (ENSAPLG00000006886) #32	KLHDC1 (ENSAPLG00000007007) #33	POLE2 (ENSAPLG00000007393) #34	DNAAF2 (ENSAPLG00000027399) #35	MGAT2 (ENSAPLG00000029220)	MDGA2 (ENSAPLG00000014673)
Phasianidae	ANCESTRAL SPECIES	4	ENSGT00940000154859	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155959 #17	ENSGT00940000154071.A.b #18	ENSGT00950000183148.a #19	ENSGT00940000166415	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Japanese quail	MODERN SPECIES	23	STYX (ENSCJPG00005011627)	PSMC6 (ENSCJPG00005011452) #7	ERO1A (ENSCJPG00005011449) #8	GPR137C (ENSCJPG00005011448) #9	TXNDC16 (ENSCJPG00005011446) #10	PTGER2 (ENSCJPG00005011445) #11	PTGDR (ENSCJPG00005011444) #12	NID2 (ENSCJPG00005011332) #13	RTRAF (ENSCJPG00005011331) #14	GNG2 (ENSCJPG00005011330) #15	ENSCJPG00005011319 #16	ENSCJPG00005011317 #18	PYGL (ENSCJPG00005009290) #19	ENSCJPG00005009249	NIN (ENSCJPG00005007844) #21	SAV1 (ENSCJPG00005007830) #22	ATL1 (ENSCJPG00005007643) #23	MAP4K5 (ENSCJPG00005007300) #24	ENSCJPG00005007299 #25	DMAC2L (ENSCJPG00005007298) #26	L2HGDH (ENSCJPG00005007283) #27	SOS2 (ENSCJPG00005006965) #28	VCPKMT (ENSCJPG00005006962) #29	ARF6 (ENSCJPG00005006959) #30	ENSCJPG00005006954	NEMF (ENSCJPG00005006660) #31	KLHDC2 (ENSCJPG00005006648) #32	KLHDC1 (ENSCJPG00005006635) #33	POLE2 (ENSCJPG00005006404) #34	ENSCJPG00005006390 #35	MGAT2 (ENSCJPG00005006389)
Phasianidae_b	ANCESTRAL SPECIES	3	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.b #18	ENSGT00950000183148.a #19	ENSGT00940000166415	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a	ENSGT00940000158830 #37
Chicken	MODERN SPECIES	34	PSMC6 (ENSGALG00010018043) #7	ERO1A (ENSGALG00010018032) #8	GPR137C (ENSGALG00010017976) #9	TXNDC16 (ENSGALG00010017962) #10	PTGER2 (ENSGALG00010017954) #11	PTGDR (ENSGALG00010017946) #12	NID2 (ENSGALG00010019673) #13	RTRAF (ENSGALG00010019655) #14	GNG2 (ENSGALG00010019634) #15	FRMD6 (ENSGALG00010019613) #16	TMX1 (ENSGALG00010019594) #17	TRIM9 (ENSGALG00010019557) #18	PYGL (ENSGALG00010019481) #19	ENSGALG00010019430	NIN (ENSGALG00010019392) #21	SAV1 (ENSGALG00010019350) #22	ATL1 (ENSGALG00010019334) #23	MAP4K5 (ENSGALG00010019295) #24	CDKL1 (ENSGALG00010019271) #25	ATP5S (ENSGALG00010019266) #26	L2HGDH (ENSGALG00010019259) #27	SOS2 (ENSGALG00010019232) #28	VCPKMT (ENSGALG00010019209) #29	ARF6 (ENSGALG00010019204) #30	ENSGALG00010020133	NEMF (ENSGALG00010019172) #31	KLHDC2 (ENSGALG00010019146) #32	KLHDC1 (ENSGALG00010019113) #33	POLE2 (ENSGALG00010019101) #34	DNAAF2 (ENSGALG00010019025) #35	MGAT2 (ENSGALG00010020129)
Turkey	MODERN SPECIES	25	TXNDC16 (ENSMGAG00000013791) #10	PTGER2 (ENSMGAG00000013782) #11	ENSMGAG00000022140	NID2 (ENSMGAG00000013786) #13	RTRAF (ENSMGAG00000013784) #14	GNG2 (ENSMGAG00000013783) #15	ENSMGAG00000018444 #16	ENSMGAG00000013780 #16	ENSMGAG00000013801 #8	ENSMGAG00000019781 #17	ENSMGAG00000017629	TRIM9 (ENSMGAG00000013777) #18	PYGL (ENSMGAG00000013765) #19	ENSMGAG00000013760	NIN (ENSMGAG00000013755) #21	SAV1 (ENSMGAG00000013751) #22	ATL1 (ENSMGAG00000013747) #23	MAP4K5 (ENSMGAG00000013740) #24	CDKL1 (ENSMGAG00000013737) #25	DMAC2L (ENSMGAG00000013736) #26	L2HGDH (ENSMGAG00000013732) #27	SOS2 (ENSMGAG00000013729) #28	VCPKMT (ENSMGAG00000013728) #29	ARF6 (ENSMGAG00000013730) #30	NEMF (ENSMGAG00000013725) #31	KLHDC2 (ENSMGAG00000013719) #32	KLHDC1 (ENSMGAG00000013716) #33	POLE2 (ENSMGAG00000013709) #34	ENSMGAG00000013708 #35	LRR1 (ENSMGAG00000013706) #37	ENSMGAG00000022467
Neognathae_b	ANCESTRAL SPECIES	6	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT01100000264601	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35
Neognathae_c	ANCESTRAL SPECIES	6	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000166415	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT01060000249343	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34	ENSGT00510000048466 #35	ENSGT00390000007341.a
Golden eagle	MODERN SPECIES	11	PSMC6 (ENSACCG00020004137) #7	ERO1A (ENSACCG00020004129) #8	GPR137C (ENSACCG00020004125) #9	TXNDC16 (ENSACCG00020004113) #10	PTGER2 (ENSACCG00020004103) #11	PTGDR (ENSACCG00020004097) #12	NID2 (ENSACCG00020004055) #13	RTRAF (ENSACCG00020004001) #14	GNG2 (ENSACCG00020003988) #15	FRMD6 (ENSACCG00020003981) #16	TMX1 (ENSACCG00020003966) #17	TRIM9 (ENSACCG00020003946) #18	PYGL (ENSACCG00020003912) #19	ENSACCG00020003896	NIN (ENSACCG00020003155) #21	SAV1 (ENSACCG00020002328) #22	ATL1 (ENSACCG00020002300) #23	MAP4K5 (ENSACCG00020002226) #24	CDKL1 (ENSACCG00020002172) #25	DMAC2L (ENSACCG00020002155) #26	L2HGDH (ENSACCG00020002118) #27	SOS2 (ENSACCG00020002028) #28	VCPKMT (ENSACCG00020001991) #29	ARF6 (ENSACCG00020001975) #30	ENSACCG00020001949	NEMF (ENSACCG00020001915) #31	KLHDC2 (ENSACCG00020001884) #32	KLHDC1 (ENSACCG00020001858) #33	POLE2 (ENSACCG00020001828) #34	DNAAF2 (ENSACCG00020001791) #35	MGAT2 (ENSACCG00020001766)
Kakapo	MODERN SPECIES	21	ERO1A (ENSSHBG00005004726) #8	GPR137C (ENSSHBG00005004735) #9	TXNDC16 (ENSSHBG00005004741) #10	PTGER2 (ENSSHBG00005004750) #11	PTGDR (ENSSHBG00005004753) #12	NID2 (ENSSHBG00005004772) #13	RTRAF (ENSSHBG00005004801) #14	FRMD6 (ENSSHBG00005004816) #16	TMX1 (ENSSHBG00005004821) #17	TRIM9 (ENSSHBG00005004826) #18	ENSSHBG00005004916 #19	ENSSHBG00005005015	ENSSHBG00005005028 #19	NIN (ENSSHBG00005005040) #21	ENSSHBG00005005049	SAV1 (ENSSHBG00005005058) #22	ATL1 (ENSSHBG00005005065) #23	MAP4K5 (ENSSHBG00005005077) #24	CDKL1 (ENSSHBG00005005083) #25	DMAC2L (ENSSHBG00005005089) #26	L2HGDH (ENSSHBG00005005097) #27	SOS2 (ENSSHBG00005005105) #28	VCPKMT (ENSSHBG00005005109) #29	ARF6 (ENSSHBG00005005113) #30	ENSSHBG00005005119	ENSSHBG00005005125	NEMF (ENSSHBG00005005239) #31	KLHDC2 (ENSSHBG00005006741) #32	KLHDC1 (ENSSHBG00005006773) #33	POLE2 (ENSSHBG00005006793) #34	DNAAF2 (ENSSHBG00005006809) #35
Passeriformes	ANCESTRAL SPECIES	5	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT01100000264601	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00960000191450	ENSGT00960000189957	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34
Great tit	MODERN SPECIES	25	GPR137C (ENSPMJG00000011868) #9	TXNDC16 (ENSPMJG00000011869) #10	PTGER2 (ENSPMJG00000011870) #11	ENSPMJG00000011871	PTGDR (ENSPMJG00000011872) #12	NID2 (ENSPMJG00000011873) #13	RTRAF (ENSPMJG00000011874) #14	GNG2 (ENSPMJG00000011876) #15	FRMD6 (ENSPMJG00000011877) #16	ENSPMJG00000011903 #17	ENSPMJG00000011904 #17	TRIM9 (ENSPMJG00000011906) #18	PYGL (ENSPMJG00000011907) #19	ENSPMJG00000011908	NIN (ENSPMJG00000011909) #21	SAV1 (ENSPMJG00000013368) #22	ATL1 (ENSPMJG00000013369) #23	MAP4K5 (ENSPMJG00000013651) #24	CDKL1 (ENSPMJG00000013653) #25	DMAC2L (ENSPMJG00000013671) #26	L2HGDH (ENSPMJG00000013680) #27	SOS2 (ENSPMJG00000013687) #28	VCPKMT (ENSPMJG00000013688) #29	ARF6 (ENSPMJG00000013689) #30	ENSPMJG00000013690	ENSPMJG00000013691	NEMF (ENSPMJG00000013694) #31	KLHDC2 (ENSPMJG00000013695) #32	KLHDC1 (ENSPMJG00000013697) #33	POLE2 (ENSPMJG00000013700) #34	DNAAF2 (ENSPMJG00000013854) #35
Passeriformes_d	ANCESTRAL SPECIES	5	ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT01100000264601	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00960000191450	ENSGT00960000189957	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34
Flycatcher	MODERN SPECIES	24	ERO1A (ENSFALG00000003881) #8	GPR137C (ENSFALG00000024805) #9	ENSFALG00000026882 ##9	TXNDC16 (ENSFALG00000003892) #10	PTGER2 (ENSFALG00000003905) #11	PTGDR (ENSFALG00000027923) #12	NID2 (ENSFALG00000003915) #13	RTRAF (ENSFALG00000001927) #14	GNG2 (ENSFALG00000001923) #15	FRMD6 (ENSFALG00000026340) #16	TMX1 (ENSFALG00000001908) #17	TRIM9 (ENSFALG00000001905) #18	PYGL (ENSFALG00000001878) #19	ENSFALG00000001865	NIN (ENSFALG00000001860) #21	SAV1 (ENSFALG00000001858) #22	ATL1 (ENSFALG00000001855) #23	MAP4K5 (ENSFALG00000001852) #24	CDKL1 (ENSFALG00000001849) #25	DMAC2L (ENSFALG00000001845) #26	L2HGDH (ENSFALG00000001839) #27	SOS2 (ENSFALG00000001823) #28	ENSFALG00000023876	VCPKMT (ENSFALG00000001814) #29	ARF6 (ENSFALG00000014477) #30	ENSFALG00000025644	ENSFALG00000028030	NEMF (ENSFALG00000001783) #31	KLHDC2 (ENSFALG00000001772) #32	KLHDC1 (ENSFALG00000001768) #33	POLE2 (ENSFALG00000001755) #34
Passeriformes_g	ANCESTRAL SPECIES		ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT01100000264601	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00960000191450	ENSGT00960000189957	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34
Medium ground finch	MODERN SPECIES	6	PSMC6 (ENSGFOG00000003335) #7	ERO1A (ENSGFOG00000003383) #8	GPR137C (ENSGFOG00000003406) #9	TXNDC16 (ENSGFOG00000003440) #10	ENSGFOG00000003469	ENSGFOG00000003488	ENSGFOG00000002337 #13	RTRAF (ENSGFOG00000002355) #14	GNG2 (ENSGFOG00000002375) #15	FRMD6 (ENSGFOG00000002390) #16	TMX1 (ENSGFOG00000002446) #17	TRIM9 (ENSGFOG00000002538) #18	PYGL (ENSGFOG00000002872) #19	ABHD12B (ENSGFOG00000004263) #20	NIN (ENSGFOG00000004285) #21	SAV1 (ENSGFOG00000004399) #22	ATL1 (ENSGFOG00000004428) #23	MAP4K5 (ENSGFOG00000004478) #24	CDKL1 (ENSGFOG00000004600) #25	DMAC2L (ENSGFOG00000004638) #26	L2HGDH (ENSGFOG00000004657) #27	SOS2 (ENSGFOG00000004678) #28	VCPKMT (ENSGFOG00000004728) #29	ARF6 (ENSGFOG00000004740) #30	ENSGFOG00000004746	ENSGFOG00000004762	ENSGFOG00000004769	NEMF (ENSGFOG00000004796) #31	KLHDC2 (ENSGFOG00000004857) #32	KLHDC1 (ENSGFOG00000004869) #33	POLE2 (ENSGFOG00000004882) #34
Passeroidea	ANCESTRAL SPECIES	1	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00940000166415	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT01100000264601	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30	ENSGT00960000191450	ENSGT00960000189957	ENSGT00390000018516 #31	ENSGT00940000157150 #32	ENSGT00940000157509 #33	ENSGT00390000012435 #34
Zebra finch	MODERN SPECIES	27	ENSTGUG00000024464 #17	ENSTGUG00000013140 #18	ENSTGUG00000024973 #19	ENSTGUG00000003417	ENSTGUG00000018879	ENSTGUG00000025387	ENSTGUG00000023083 #12	ENSTGUG00000029264	ENSTGUG00000026026 #13	RTRAF (ENSTGUG00000019490) #14	ENSTGUG00000024011 #16	ENSTGUG00000027864 #18	ENSTGUG00000013142 #19	ENSTGUG00000016310	NIN (ENSTGUG00000013151) #21	SAV1 (ENSTGUG00000026733) #22	ATL1 (ENSTGUG00000013160) #23	MAP4K5 (ENSTGUG00000013168) #24	CDKL1 (ENSTGUG00000013175) #25	DMAC2L (ENSTGUG00000013180) #26	L2HGDH (ENSTGUG00000013182) #27	SOS2 (ENSTGUG00000013184) #28	VCPKMT (ENSTGUG00000013194) #29	ARF6 (ENSTGUG00000013196) #30	ENSTGUG00000029401	ENSTGUG00000020114	KLHDC2 (ENSTGUG00000013199) #32	KLHDC1 (ENSTGUG00000013206) #33	POLE2 (ENSTGUG00000013211) #34	DNAAF2 (ENSTGUG00000026992) #35	MGAT2 (ENSTGUG00000028451)
Common canary	MODERN SPECIES	3	ENSSCAG00000001930	GPR137C (ENSSCAG00000001925) #9	ENSSCAG00000001910 ##9	TXNDC16 (ENSSCAG00000001897) #10	PTGER2 (ENSSCAG00000001891) #11	ENSSCAG00000001887 #12	NID2 (ENSSCAG00000001839) #13	RTRAF (ENSSCAG00000001831) #14	GNG2 (ENSSCAG00000001826) #15	FRMD6 (ENSSCAG00000001814) #16	TMX1 (ENSSCAG00000001808) #17	TRIM9 (ENSSCAG00000001757) #18	PYGL (ENSSCAG00000001739) #19	ENSSCAG00000001731	NIN (ENSSCAG00000001720) #21	SAV1 (ENSSCAG00000001714) #22	ATL1 (ENSSCAG00000001707) #23	ENSSCAG00000001702	MAP4K5 (ENSSCAG00000001688) #24	CDKL1 (ENSSCAG00000001671) #25	DMAC2L (ENSSCAG00000001667) #26	L2HGDH (ENSSCAG00000001661) #27	SOS2 (ENSSCAG00000000924) #28	VCPKMT (ENSSCAG00000000760) #29	ARF6 (ENSSCAG00000000753) #30	ENSSCAG00000000730	NEMF (ENSSCAG00000000715) #31	KLHDC2 (ENSSCAG00000000703) #32	KLHDC1 (ENSSCAG00000000691) #33	POLE2 (ENSSCAG00000000447) #34
Anura	ANCESTRAL SPECIES	140	ENSGT00940000168268	ENSGT00390000005033	ENSGT00390000012377	ENSGT00940000158586	ENSGT00390000007395	ENSGT00530000069038	ENSGT00940000155369.A	ENSGT00940000161931	ENSGT00940000158830 #37	ENSGT00390000007341.a	ENSGT00510000048466 #35	ENSGT00390000012435 #34	ENSGT00940000157509 #33	ENSGT00940000157150 #32	ENSGT00390000018516 #31	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00940000157135 #29	ENSGT00940000156593 #30
Frog	MODERN SPECIES	8	vcpkmt (ENSXETG00000037439) #29	ENSXETG00000046230	mdga2 (ENSXETG00000023850)	ENSXETG00000048674	ENSXETG00000038556	ENSXETG00000049121	rps29 (ENSXETG00000034554)	lrr1 (ENSXETG00000009119) #37	mgat2 (ENSXETG00000009121)	dnaaf2 (ENSXETG00000009122) #35	pole2 (ENSXETG00000009123) #34	ENSXETG00000045509	klhdc1 (ENSXETG00000027737) #33	klhdc2 (ENSXETG00000009125) #32	nemf (ENSXETG00000027739) #31	sav1 (ENSXETG00000027740) #22	atl1 (ENSXETG00000009126) #23	ENSXETG00000044692	a2ml1 (ENSXETG00000009127) #24	sos2 (ENSXETG00000009131) #28	ENSXETG00000048869	l2hgdh (ENSXETG00000019714) #27	dmac2l (ENSXETG00000019713) #26	cdkl1 (ENSXETG00000019709) #25	ENSXETG00000040511	XB5727064 [provisional] (ENSXETG00000027743)	mis18bp1 (ENSXETG00000039783)	ENSXETG00000003049	fancm (ENSXETG00000030986)	fkbp3 (ENSXETG00000003052)	fpgt (ENSXETG00000003057)
Leishan spiny toad	MODERN SPECIES	4	KLHL28 (ENSLLEG00000022042)	ENSLLEG00000022147	ENSLLEG00000022318	ENSLLEG00000022366	FLVCR2 (ENSLLEG00000022444)	BATF (ENSLLEG00000022782)	TMED10 (ENSLLEG00000022836)	FOS (ENSLLEG00000022924)	NEK9 (ENSLLEG00000023016)	ENSLLEG00000023744	ENSLLEG00000023753	DNAAF2 (ENSLLEG00000023774) #35	POLE2 (ENSLLEG00000023819) #34	KLHDC2 (ENSLLEG00000024004) #32	NEMF (ENSLLEG00000024139) #31	SAV1 (ENSLLEG00000024463) #22	ATL1 (ENSLLEG00000024633) #23	MAP4K5 (ENSLLEG00000017382) #24	CDKL1 (ENSLLEG00000017782) #25	DMAC2L (ENSLLEG00000018022) #26	L2HGDH (ENSLLEG00000018280) #27	SOS2 (ENSLLEG00000018905) #28	VCPKMT (ENSLLEG00000019764) #29	ARF6 (ENSLLEG00000019960) #30	ENSLLEG00000020016	ENSLLEG00000020838	HHIPL1 (ENSLLEG00000022029)	CCDC85C (ENSLLEG00000022389)	CCNK (ENSLLEG00000022498)	SETD3 (ENSLLEG00000022623)	BCL11B (ENSLLEG00000022768)
Coelacanth	MODERN SPECIES	510						NID2 (ENSLACG00000016499) #13	RTRAF (ENSLACG00000016434) #14	ENSLACG00000016327	GNG2 (ENSLACG00000016180) #15	FRMD6 (ENSLACG00000015755) #16	TMX1 (ENSLACG00000015219) #17	TRIM9 (ENSLACG00000014562) #18	PYGL (ENSLACG00000014055) #19	ENSLACG00000022347	NIN (ENSLACG00000012876) #21	SAV1 (ENSLACG00000012487) #22	ATL1 (ENSLACG00000012098) #23	MAP4K5 (ENSLACG00000010941) #24	CDKL1 (ENSLACG00000010298) #25	DMAC2L (ENSLACG00000010201) #26	L2HGDH (ENSLACG00000009550) #27	SOS2 (ENSLACG00000007625) #28	ENSLACG00000004979	ARF6 (ENSLACG00000004676) #30	C14orf28 (ENSLACG00000004114)
Actinopterygii	ANCESTRAL SPECIES	87	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a #11	ENSGT01050000244902.b.c.b #12	ENSGT00940000157901 #13	ENSGT00940000177331	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224	ENSGT00940000165169	ENSGT00530000064222.b	ENSGT00390000011854	ENSGT00940000159561
Reedfish	MODERN SPECIES	7	ENSECRG00000016464	RTN1 (ENSECRG00000016438)	LRRC9 (ENSECRG00000016327)	pcnx4 (ENSECRG00000016288)	dhrs7 (ENSECRG00000016268)	ppm1aa (ENSECRG00000016240)	six6a (ENSECRG00000016213)	six1b (ENSECRG00000016194)	SIX4 (ENSECRG00000016182)	mnat1 (ENSECRG00000016161)	trmt5 (ENSECRG00000016098)	slc38a6 (ENSECRG00000016045)	trim9 (ENSECRG00000015898) #18	pygl (ENSECRG00000015702) #19	NIN (ENSECRG00000015439) #21	sav1 (ENSECRG00000015359) #22	atl1 (ENSECRG00000015270) #23	map4k5 (ENSECRG00000015011) #24	ENSECRG00000014862	cdkl1 (ENSECRG00000014811) #25	dmac2l (ENSECRG00000014785) #26	l2hgdh (ENSECRG00000021103) #27	sos2 (ENSECRG00000020990) #28	cdkn3 (ENSECRG00000020930)	cnih1 (ENSECRG00000020904)	gmfb (ENSECRG00000020883)	ENSECRG00000020837	lgals3a (ENSECRG00000020822)	lgals3b (ENSECRG00000020808)	fbxo34 (ENSECRG00000020794)	atg14 (ENSECRG00000020767)
Neopterygii	ANCESTRAL SPECIES		ENSGT01020000230346.A #7	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a.a #11	ENSGT00940000157901 #13	ENSGT00940000177331	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT01030000239223	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224	ENSGT00940000165169	ENSGT00530000064222.b	ENSGT00390000011854	ENSGT00940000159561
Spotted gar	MODERN SPECIES	673	psmc6 (ENSLOCG00000012064) #7	ero1a (ENSLOCG00000012049) #8	gpr137c (ENSLOCG00000012038) #9	ptger2a (ENSLOCG00000012035) #11	TXNDC16 (ENSLOCG00000012026) #10	PTGDR (ENSLOCG00000012020) #12	NID2 (ENSLOCG00000012006) #13	rtraf (ENSLOCG00000012000) #14	gng2 (ENSLOCG00000011994) #15	frmd6 (ENSLOCG00000011982) #16	tmx1 (ENSLOCG00000011971) #17	trim9 (ENSLOCG00000011961) #18	pygl (ENSLOCG00000011949) #19	ENSLOCG00000011938	NIN (ENSLOCG00000011900) #21	sav1 (ENSLOCG00000011893) #22	atl1 (ENSLOCG00000011885) #23	map4k5 (ENSLOCG00000011867) #24	cdkl1 (ENSLOCG00000011854) #25	dmac2l (ENSLOCG00000011844) #26	l2hgdh (ENSLOCG00000011835) #27	sos2 (ENSLOCG00000011825) #28	ENSLOCG00000011821	cdkn3 (ENSLOCG00000011806)	cnih1 (ENSLOCG00000011793)	gmfb (ENSLOCG00000011787)	lgals3a (ENSLOCG00000011781)	LGALS3 (ENSLOCG00000011769)	fbxo34 (ENSLOCG00000011757)	atg14 (ENSLOCG00000011741)	jmjd7 (ENSLOCG00000011726)
Osteoglossocephalai	ANCESTRAL SPECIES	36		ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a.a #11	ENSGT00940000157901 #13	ENSGT00940000177331	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT01030000239223	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b
Osteoglossiformes	ANCESTRAL SPECIES	156	ENSGT00940000166202	ENSGT00390000008666	ENSGT00390000007753.b #8	ENSGT00940000153986.a #9	ENSGT00390000006080 #10	ENSGT01050000244902.b.c.a.a #11	ENSGT00940000157901 #13	ENSGT00390000005163 #14	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959.v #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a
Asian bonytongue	MODERN SPECIES	6	socs4 (ENSSFOG00015009925)	gnpnat1 (ENSSFOG00015031828)	ENSSFOG00015009842	ero1a (ENSSFOG00015009778) #8	gpr137c (ENSSFOG00015009752) #9	TXNDC16 (ENSSFOG00015009723) #10	ptger2a (ENSSFOG00015009700) #11	NID2 (ENSSFOG00015009662) #13	rtraf (ENSSFOG00015009621) #14	frmd6 (ENSSFOG00015025768) #16	TMX1 (ENSSFOG00015009516) #17	trim9 (ENSSFOG00015009472) #18	pygl (ENSSFOG00015009383) #19	ENSSFOG00015009359	NIN (ENSSFOG00015009296) #21	sav1 (ENSSFOG00015009263) #22	atl1 (ENSSFOG00015009212) #23	map4k5 (ENSSFOG00015008858) #24	cdkl1 (ENSSFOG00015008719) #25	dmac2l (ENSSFOG00015008697) #26	l2hgdh (ENSSFOG00015008668) #27	sos2 (ENSSFOG00015008597) #28	cdkn3 (ENSSFOG00015008547)	cnih1 (ENSSFOG00015025081)	gmfb (ENSSFOG00015024882)	ENSSFOG00015029203	synj2bp (ENSSFOG00015026193)	lgals3a (ENSSFOG00015008391)	srsf5a (ENSSFOG00015026784)	pacs2 (ENSSFOG00015008284)	dcaf5 (ENSSFOG00015008236)
P. kingsleyae	MODERN SPECIES	904																sav1 (ENSPKIG00000008761) #22
Clupeocephala	ANCESTRAL SPECIES	77									ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Euteleosteomorpha	ANCESTRAL SPECIES	19	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Acanthomorphata	ANCESTRAL SPECIES	19	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155208.a.a	ENSGT00940000155089	ENSGT00940000155208.a.b.a	ENSGT00940000155237	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Euacanthomorphacea	ANCESTRAL SPECIES	11	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Pinecone sodierfish	MODERN SPECIES	14	COQ8A (ENSMMDG00005022296)	TATDN3 (ENSMMDG00005022259)	fuca2 (ENSMMDG00005022258)	ENSMMDG00005022256	txlnbb (ENSMMDG00005022255)	ENSMMDG00005022254	slc22a3 (ENSMMDG00005022249)	dusp23a (ENSMMDG00005022192)	gng2 (ENSMMDG00005022189) #15	frmd6 (ENSMMDG00005022183) #16	tmx1 (ENSMMDG00005022180) #17	trim9 (ENSMMDG00005022178) #18	pygl (ENSMMDG00005022131) #19	ENSMMDG00005022124	ENSMMDG00005022120 #21	sav1 (ENSMMDG00005022118) #22	atl1 (ENSMMDG00005022111) #23	map4k5 (ENSMMDG00005019485) #24	cdkl1 (ENSMMDG00005019438) #25	dmac2l (ENSMMDG00005019431) #26	l2hgdh (ENSMMDG00005019424) #27	sos2 (ENSMMDG00005019397) #28	cdkn3 (ENSMMDG00005019391)	cnih1 (ENSMMDG00005019382)	gmfb (ENSMMDG00005019377)	lgals3a (ENSMMDG00005019375)	synj2bp (ENSMMDG00005019373)	ENSMMDG00005019370	srsf5a (ENSMMDG00005019364)	pacs2 (ENSMMDG00005019333)	dcaf5 (ENSMMDG00005019329)
Percomorphaceae	ANCESTRAL SPECIES	13	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Tiger tail seahorse	MODERN SPECIES	204	fuca2 (ENSHCOG00000017203)	ENSHCOG00000017178	txlnbb (ENSHCOG00000017094)	ENSHCOG00000017083	dusp23a (ENSHCOG00000017072)	gng2 (ENSHCOG00000017059) #15	frmd6 (ENSHCOG00000017046) #16	ENSHCOG00000017010	tmx1 (ENSHCOG00000017000) #17	ENSHCOG00000016989	trim9 (ENSHCOG00000016978) #18	pygl (ENSHCOG00000016938) #19	ENSHCOG00000016891	ENSHCOG00000016876 #21	ENSHCOG00000016864	sav1 (ENSHCOG00000016856) #22	atl1 (ENSHCOG00000016850) #23	map4k5 (ENSHCOG00000016795) #24	cdkl1 (ENSHCOG00000016541) #25	dmac2l (ENSHCOG00000016519) #26	l2hgdh (ENSHCOG00000016471) #27	sos2 (ENSHCOG00000016427) #28	cdkn3 (ENSHCOG00000016393)	cnih1 (ENSHCOG00000016389)	gmfb (ENSHCOG00000016370)	gmfb (ENSHCOG00000000457)	lgals3a (ENSHCOG00000016314)	synj2bp (ENSHCOG00000016306)	ENSHCOG00000016299	ENSHCOG00000016276	gna11b (ENSHCOG00000016239)
Percomorphaceae_B	ANCESTRAL SPECIES	11	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Percomorphaceae_C	ANCESTRAL SPECIES	12	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b
Percomorphaceae_D	ANCESTRAL SPECIES	10	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT01060000248652	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Anabantaria	ANCESTRAL SPECIES	10	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00530000063359.A.n	ENSGT00940000155237	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00940000164252.a.b	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Climbing perch	MODERN SPECIES	13	dnajc5gb (ENSATEG00000001184)	ENSATEG00000001181	ENSATEG00000025520	ENSATEG00000001165	fuca2 (ENSATEG00000001140)	ENSATEG00000001134	txlnbb (ENSATEG00000001126)	ENSATEG00000001107	GNG2 (ENSATEG00000001089) #15	frmd6 (ENSATEG00000001014) #16	tmx1 (ENSATEG00000025807) #17	trim9 (ENSATEG00000000959) #18	pygl (ENSATEG00000000875) #19	ENSATEG00000000684	NIN (ENSATEG00000000656) #21	sav1 (ENSATEG00000000628) #22	atl1 (ENSATEG00000000582) #23	map4k5 (ENSATEG00000000571) #24	cdkl1 (ENSATEG00000026106) #25	dmac2l (ENSATEG00000029060) #26	l2hgdh (ENSATEG00000000453) #27	sos2 (ENSATEG00000000326) #28	cdkn3 (ENSATEG00000000313)	cnih1 (ENSATEG00000000270)	gmfb (ENSATEG00000028832)	lgals3a (ENSATEG00000000220)	synj2bp (ENSATEG00000000214)	ENSATEG00000030042	srsf5a (ENSATEG00000000198)	pacs2 (ENSATEG00000000042)	dcaf5 (ENSATEG00000021593)
Siamese fighting fish	MODERN SPECIES	12	dnajc5gb (ENSBSLG00000026606)	SLC30A2 (ENSBSLG00000026607)	COQ8A (ENSBSLG00000026609)	TATDN3 (ENSBSLG00000026618)	fuca2 (ENSBSLG00000016823)	ENSBSLG00000016868	txlnbb (ENSBSLG00000017036)	dusp23a (ENSBSLG00000017330)	gng2 (ENSBSLG00000017342) #15	frmd6 (ENSBSLG00000017355) #16	tmx1 (ENSBSLG00000017406) #17	trim9 (ENSBSLG00000017463) #18	pygl (ENSBSLG00000017536) #19	ENSBSLG00000017761	ENSBSLG00000017809 #21	sav1 (ENSBSLG00000017827) #22	atl1 (ENSBSLG00000017918) #23	map4k5 (ENSBSLG00000019613) #24	cdkl1 (ENSBSLG00000020952) #25	dmac2l (ENSBSLG00000021018) #26	l2hgdh (ENSBSLG00000021091) #27	sos2 (ENSBSLG00000021387) #28	cdkn3 (ENSBSLG00000021984)	cnih1 (ENSBSLG00000021999)	gmfb (ENSBSLG00000022044)	lgals3a (ENSBSLG00000022067)	synj2bp (ENSBSLG00000022076)	ENSBSLG00000022080	srsf5a (ENSBSLG00000022096)	pacs2 (ENSBSLG00000022163)	dcaf5 (ENSBSLG00000023476)
Zig-zag eel	MODERN SPECIES	14	ENSMAMG00000000220	ENSMAMG00000000219	ENSMAMG00000000218	fuca2 (ENSMAMG00000000217)	ENSMAMG00000026478	txlnbb (ENSMAMG00000000215)	ENSMAMG00000000214	ENSMAMG00000000213	GNG2 (ENSMAMG00000000212) #15	frmd6 (ENSMAMG00000000211) #16	tmx1 (ENSMAMG00000027691) #17	trim9 (ENSMAMG00000000209) #18	pygl (ENSMAMG00000000208) #19	ENSMAMG00000024845	NIN (ENSMAMG00000000206) #21	sav1 (ENSMAMG00000000205) #22	atl1 (ENSMAMG00000000204) #23	map4k5 (ENSMAMG00000000203) #24	cdkl1 (ENSMAMG00000000202) #25	dmac2l (ENSMAMG00000024584) #26	l2hgdh (ENSMAMG00000000200) #27	sos2 (ENSMAMG00000000199) #28	cdkn3 (ENSMAMG00000000198)	cnih1 (ENSMAMG00000000197)	gmfb (ENSMAMG00000000196)	lgals3a (ENSMAMG00000000195)	synj2bp (ENSMAMG00000026863)	ENSMAMG00000025917	srsf5a (ENSMAMG00000000192)	pacs2 (ENSMAMG00000000191)	dcaf5 (ENSMAMG00000000190)
Carangaria	ANCESTRAL SPECIES	10	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT01060000248652	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Pleuronectoidei	ANCESTRAL SPECIES	5	ENSGT00940000155959 #17	ENSGT00940000155517 #16	ENSGT01100000263497.C #15	ENSGT00940000161329	ENSGT00940000157418.b	ENSGT00940000156512.b.a	ENSGT00440000035378.d	ENSGT00720000108846.a	ENSGT00940000156810.b.a.b	ENSGT00940000156072.a.b	ENSGT00940000164252.a.b	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Turbot	MODERN SPECIES	8	GNG2 (ENSSMAG00000010504) #15	ENSSMAG00000012635	ENSSMAG00000032466	txlnbb (ENSSMAG00000012595)	ENSSMAG00000012579	fuca2 (ENSSMAG00000012546)	ENSSMAG00000012523	ENSSMAG00000012528	ENSSMAG00000012463	ENSSMAG00000012450	dnajc5gb (ENSSMAG00000012417)	trim9 (ENSSMAG00000012365) #18	pygl (ENSSMAG00000012269) #19	ENSSMAG00000012227	NIN (ENSSMAG00000012209) #21	sav1 (ENSSMAG00000012200) #22	atl1 (ENSSMAG00000011403) #23	map4k5 (ENSSMAG00000011306) #24	cdkl1 (ENSSMAG00000011277) #25	dmac2l (ENSSMAG00000011263) #26	l2hgdh (ENSSMAG00000011241) #27	sos2 (ENSSMAG00000011187) #28	cdkn3 (ENSSMAG00000011164)	cnih1 (ENSSMAG00000011015)	gmfb (ENSSMAG00000038072)	lgals3a (ENSSMAG00000010983)	synj2bp (ENSSMAG00000010972)	ENSSMAG00000010944	srsf5a (ENSSMAG00000010899)	pacs2 (ENSSMAG00000010646)	actn1 (ENSSMAG00000010553)
Tongue sole	MODERN SPECIES		frmd6 (ENSCSEG00000007314) #16	gng2 (ENSCSEG00000007350) #15	dusp23a (ENSCSEG00000007363)	txlnbb (ENSCSEG00000007395)	ENSCSEG00000007403	fuca2 (ENSCSEG00000007439)	TATDN3 (ENSCSEG00000007447)	ENSCSEG00000007463	COQ8A (ENSCSEG00000007478)	ENSCSEG00000007511	dnajc5gb (ENSCSEG00000007521)	trim9 (ENSCSEG00000007542) #18	pygl (ENSCSEG00000007588) #19	ENSCSEG00000007617	ENSCSEG00000007632 #21	sav1 (ENSCSEG00000007644) #22	atl1 (ENSCSEG00000007668) #23	map4k5 (ENSCSEG00000007723) #24	cdkl1 (ENSCSEG00000007823) #25	dmac2l (ENSCSEG00000007844) #26	l2hgdh (ENSCSEG00000007854) #27	sos2 (ENSCSEG00000007873) #28	cdkn3 (ENSCSEG00000007997)	cnih1 (ENSCSEG00000008026)	gmfb (ENSCSEG00000008042)	lgals3a (ENSCSEG00000008064)	synj2bp (ENSCSEG00000008085)	ENSCSEG00000008094	ENSCSEG00000008098	srsf5a (ENSCSEG00000008109)	pacs2 (ENSCSEG00000008305)
Carangaria_A	ANCESTRAL SPECIES	4	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT01060000248652	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Seriola	ANCESTRAL SPECIES	3	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Yellowtail amberjack	MODERN SPECIES	3025	TATDN3 (ENSSLDG00000002432)	fuca2 (ENSSLDG00000002478)	ENSSLDG00000002512	txlnbb (ENSSLDG00000002531)	ENSSLDG00000002543	slc22a3 (ENSSLDG00000002555)	ENSSLDG00000002577	dusp23a (ENSSLDG00000002604)	gng2 (ENSSLDG00000002627) #15	frmd6 (ENSSLDG00000002660) #16	tmx1 (ENSSLDG00000002755) #17	trim9 (ENSSLDG00000002772) #18	pygl (ENSSLDG00000002829) #19	ENSSLDG00000002934	NIN (ENSSLDG00000002948) #21	sav1 (ENSSLDG00000002968) #22	atl1 (ENSSLDG00000002988) #23	map4k5 (ENSSLDG00000003045) #24	cdkl1 (ENSSLDG00000003561) #25	dmac2l (ENSSLDG00000003632) #26	l2hgdh (ENSSLDG00000003752) #27	sos2 (ENSSLDG00000003856) #28	cdkn3 (ENSSLDG00000003977)	cnih1 (ENSSLDG00000004033)	gmfb (ENSSLDG00000004071)	lgals3a (ENSSLDG00000004083)	synj2bp (ENSSLDG00000004112)	ENSSLDG00000004125	srsf5a (ENSSLDG00000004146)	pacs2 (ENSSLDG00000004190)	dcaf5 (ENSSLDG00000004268)
Greater amberjack	MODERN SPECIES	62	COQ8A (ENSSDUG00000007355)	TATDN3 (ENSSDUG00000007326)	fuca2 (ENSSDUG00000007304)	ENSSDUG00000007295	txlnbb (ENSSDUG00000007273)	ENSSDUG00000007263	slc22a3 (ENSSDUG00000007243)	dusp23a (ENSSDUG00000007220)	gng2 (ENSSDUG00000007212) #15	frmd6 (ENSSDUG00000007173) #16	tmx1 (ENSSDUG00000007157) #17	trim9 (ENSSDUG00000007124) #18	pygl (ENSSDUG00000007070) #19	ENSSDUG00000007046	NIN (ENSSDUG00000007003) #21	sav1 (ENSSDUG00000006991) #22	atl1 (ENSSDUG00000006940) #23	map4k5 (ENSSDUG00000006495) #24	cdkl1 (ENSSDUG00000006409) #25	dmac2l (ENSSDUG00000006400) #26	l2hgdh (ENSSDUG00000006390) #27	sos2 (ENSSDUG00000006286) #28	cdkn3 (ENSSDUG00000006204)	cnih1 (ENSSDUG00000006187)	gmfb (ENSSDUG00000006173)	lgals3a (ENSSDUG00000006160)	synj2bp (ENSSDUG00000006148)	ENSSDUG00000006131	srsf5a (ENSSDUG00000006103)	pacs2 (ENSSDUG00000006004)	dcaf5 (ENSSDUG00000005973)
Barramundi perch	MODERN SPECIES	201	COQ8A (ENSLCAG00010024798)	fuca2 (ENSLCAG00010024788)	ENSLCAG00010024786	txlnbb (ENSLCAG00010024779)	ENSLCAG00010024772	slc22a3 (ENSLCAG00010024766)	TATDN3 (ENSLCAG00010024749)	dusp23a (ENSLCAG00010024732)	gng2 (ENSLCAG00010024723) #15	frmd6 (ENSLCAG00010024706) #16	tmx1 (ENSLCAG00010024694) #17	trim9 (ENSLCAG00010024681) #18	pygl (ENSLCAG00010024583) #19	ENSLCAG00010024535	ENSLCAG00010024526 #21	sav1 (ENSLCAG00010024521) #22	atl1 (ENSLCAG00010024371) #23	map4k5 (ENSLCAG00010023851) #24	cdkl1 (ENSLCAG00010023721) #25	dmac2l (ENSLCAG00010023718) #26	l2hgdh (ENSLCAG00010023707) #27	sos2 (ENSLCAG00010023625) #28	cdkn3 (ENSLCAG00010023601)	cnih1 (ENSLCAG00010023586)	gmfb (ENSLCAG00010023574)	lgals3a (ENSLCAG00010023567)	synj2bp (ENSLCAG00010023561)	ENSLCAG00010023556	srsf5a (ENSLCAG00010023552)	pacs2 (ENSLCAG00010023473)	dcaf5 (ENSLCAG00010023442)
Eupercaria	ANCESTRAL SPECIES	9	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b
Tetraodontidae	ANCESTRAL SPECIES	3	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00530000063359.A.n	ENSGT00940000155237	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Fugu	MODERN SPECIES	11	SLC30A2 (ENSTRUG00000006190)	COQ8A (ENSTRUG00000006469)	TATDN3 (ENSTRUG00000007050)	TATDN3 (ENSTRUG00000020319)	fuca2 (ENSTRUG00000006886)	ENSTRUG00000007039	txlnbb (ENSTRUG00000007172)	dusp23a (ENSTRUG00000028929)	gng2 (ENSTRUG00000029347) #15	frmd6 (ENSTRUG00000007277) #16	tmx1 (ENSTRUG00000007397) #17	trim9 (ENSTRUG00000007629) #18	pygl (ENSTRUG00000007802) #19	ENSTRUG00000008450	ENSTRUG00000008553 #21	sav1 (ENSTRUG00000008756) #22	atl1 (ENSTRUG00000008829) #23	map4k5 (ENSTRUG00000009167) #24	cdkl1 (ENSTRUG00000009594) #25	dmac2l (ENSTRUG00000009762) #26	sos2 (ENSTRUG00000009885) #28	cdkn3 (ENSTRUG00000010247)	cnih1 (ENSTRUG00000010338)	gmfb (ENSTRUG00000029617)	lgals3a (ENSTRUG00000023625)	synj2bp (ENSTRUG00000025531)	ENSTRUG00000010679	srsf5a (ENSTRUG00000022908)	pacs2 (ENSTRUG00000010740)	dcaf5 (ENSTRUG00000011083)	actn1 (ENSTRUG00000011100)
Tetraodon	MODERN SPECIES	1	SLC30A2 (ENSTNIG00000019320)	COQ8A (ENSTNIG00000019321)	TATDN3 (ENSTNIG00000000927)	fuca2 (ENSTNIG00000009226)	ENSTNIG00000019322	ENSTNIG00000019323	ENSTNIG00000019324	dusp23a (ENSTNIG00000019325)	gng2 (ENSTNIG00000019326) #15	frmd6 (ENSTNIG00000019327) #16	tmx1 (ENSTNIG00000019328) #17	trim9 (ENSTNIG00000019329) #18	pygl (ENSTNIG00000019330) #19	ENSTNIG00000019331	NIN (ENSTNIG00000019332) #21	sav1 (ENSTNIG00000019333) #22	atl1 (ENSTNIG00000019334) #23	map4k5 (ENSTNIG00000019335) #24	cdkl1 (ENSTNIG00000019336) #25	dmac2l (ENSTNIG00000019337) #26	l2hgdh (ENSTNIG00000019338) #27	sos2 (ENSTNIG00000019339) #28	cdkn3 (ENSTNIG00000019340)	cnih1 (ENSTNIG00000019341)	gmfb (ENSTNIG00000005270)	lgals3a (ENSTNIG00000019342)	synj2bp (ENSTNIG00000000429)	ENSTNIG00000019343	pacs2 (ENSTNIG00000019344)	ENSTNIG00000019345	cox16 (ENSTNIG00000019346)
Eupecaria_A	ANCESTRAL SPECIES	10	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b
Ballan wrasse	MODERN SPECIES	838																sav1 (ENSLBEG00000017364) #22	atl1 (ENSLBEG00000017261) #23	map4k5 (ENSLBEG00000017101) #24	cdkl1 (ENSLBEG00000017024) #25	dmac2l (ENSLBEG00000016828) #26	l2hgdh (ENSLBEG00000016785) #27	sos2 (ENSLBEG00000016734) #28
Eupecaria_B	ANCESTRAL SPECIES	11	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b
Perciformes	ANCESTRAL SPECIES	12	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab.d.a	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b
Cottioidei	ANCESTRAL SPECIES	8	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155237	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab.d.a	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b
Lumpfish	MODERN SPECIES	14	SLC30A2 (ENSCLMG00005019576)	COQ8A (ENSCLMG00005019563)	TATDN3 (ENSCLMG00005019562)	fuca2 (ENSCLMG00005019561)	ENSCLMG00005019560	txlnbb (ENSCLMG00005019558)	ENSCLMG00005019557	dusp23a (ENSCLMG00005019556)	gng2 (ENSCLMG00005019555) #15	frmd6 (ENSCLMG00005019554) #16	tmx1 (ENSCLMG00005019552) #17	trim9 (ENSCLMG00005019550) #18	pygl (ENSCLMG00005019527) #19	ENSCLMG00005019517	NIN (ENSCLMG00005019516) #21	sav1 (ENSCLMG00005019514) #22	atl1 (ENSCLMG00005019512) #23	map4k5 (ENSCLMG00005019218) #24	cdkl1 (ENSCLMG00005019193) #25	dmac2l (ENSCLMG00005019190) #26	l2hgdh (ENSCLMG00005019157) #27	sos2 (ENSCLMG00005018431) #28	cdkn3 (ENSCLMG00005018407)	cnih1 (ENSCLMG00005018392)	gmfb (ENSCLMG00005018391)	lgals3a (ENSCLMG00005018389)	synj2bp (ENSCLMG00005018388)	ENSCLMG00005018386	srsf5a (ENSCLMG00005018383)	pacs2 (ENSCLMG00005018380)	dcaf5 (ENSCLMG00005018374)
Stickleback	MODERN SPECIES	15	MAP3K9 (ENSGACG00000012122)	slc8a3 (ENSGACG00000012116)	cox16 (ENSGACG00000012111)	actn1 (ENSGACG00000012063)	dcaf5 (ENSGACG00000012056)	pacs2 (ENSGACG00000012041)	PLEKHA1 (ENSGACG00000012025)	ENSGACG00000012024	gng2 (ENSGACG00000012013) #15	frmd6 (ENSGACG00000012008) #16	tmx1 (ENSGACG00000012000) #17	trim9 (ENSGACG00000011995) #18	pygl (ENSGACG00000011880) #19	ENSGACG00000011876	NIN (ENSGACG00000011867) #21	sav1 (ENSGACG00000011862) #22	atl1 (ENSGACG00000011856) #23	map4k5 (ENSGACG00000011850) #24	cdkl1 (ENSGACG00000011842) #25	dmac2l (ENSGACG00000011836) #26	l2hgdh (ENSGACG00000011810) #27	sos2 (ENSGACG00000011795) #28	ENSGACG00000011793	cdkn3 (ENSGACG00000011791)	cnih1 (ENSGACG00000011787)	gmfb (ENSGACG00000011785)	lgals3a (ENSGACG00000011778)	synj2bp (ENSGACG00000011774)	ENSGACG00000011769	srsf5a (ENSGACG00000011761)	dusp23a (ENSGACG00000011759)
Perciformes_a	ANCESTRAL SPECIES	10	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab.d.a	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Pike perch	MODERN SPECIES	24	SLC30A2 (ENSSLUG00000016522)	COQ8A (ENSSLUG00000015744)	TATDN3 (ENSSLUG00000015612)	fuca2 (ENSSLUG00000015584)	ENSSLUG00000015553	txlnbb (ENSSLUG00000015493)	dusp23a (ENSSLUG00000015476)	gng2 (ENSSLUG00000015469) #15	frmd6 (ENSSLUG00000015456) #16	tmx1 (ENSSLUG00000015437) #17	trim9 (ENSSLUG00000015411) #18	ENSSLUG00000015395	pygl (ENSSLUG00000015248) #19	ENSSLUG00000015204	ENSSLUG00000015174 #21	sav1 (ENSSLUG00000015162) #22	atl1 (ENSSLUG00000012322) #23	map4k5 (ENSSLUG00000010806) #24	cdkl1 (ENSSLUG00000010715) #25	dmac2l (ENSSLUG00000010707) #26	l2hgdh (ENSSLUG00000010697) #27	sos2 (ENSSLUG00000010572) #28	cnih1 (ENSSLUG00000010503)	cdkn3 (ENSSLUG00000010488)	gmfb (ENSSLUG00000010479)	ENSSLUG00000010470	lgals3a (ENSSLUG00000010457)	synj2bp (ENSSLUG00000010451)	ENSSLUG00000010442	srsf5a (ENSSLUG00000010435)	pacs2 (ENSSLUG00000010269)
Eupecaria_C	ANCESTRAL SPECIES	8	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	25	ENSGT00940000164252.a.b	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Large yellow croaker	MODERN SPECIES	495	SLC30A2 (ENSLCRG00005015646)	COQ8A (ENSLCRG00005015652)	TATDN3 (ENSLCRG00005015925)	fuca2 (ENSLCRG00005015929)	ENSLCRG00005015931	txlnbb (ENSLCRG00005015933)	ENSLCRG00005015984	ENSLCRG00005015985	dusp23a (ENSLCRG00005015986)	gng2 (ENSLCRG00005015988) #15	frmd6 (ENSLCRG00005015990) #16	tmx1 (ENSLCRG00005016000) #17	trim9 (ENSLCRG00005016005) #18	pygl (ENSLCRG00005016028) #19	NIN (ENSLCRG00005016172) #21	sav1 (ENSLCRG00005016174) #22	atl1 (ENSLCRG00005016187) #23	map4k5 (ENSLCRG00005017569) #24	cdkl1 (ENSLCRG00005017740) #25	dmac2l (ENSLCRG00005017766) #26	l2hgdh (ENSLCRG00005017769) #27	sos2 (ENSLCRG00005017776) #28	cdkn3 (ENSLCRG00005017780)	cnih1 (ENSLCRG00005017782)	lgals3a (ENSLCRG00005017785)	gmfb (ENSLCRG00005017788)	ENSLCRG00005017790	srsf5a (ENSLCRG00005017793)	pacs2 (ENSLCRG00005017815)	actn1 (ENSLCRG00005018935)	ENSLCRG00005021778
Gilthead seabream	MODERN SPECIES	7	COQ8A (ENSSAUG00010015240)	TATDN3 (ENSSAUG00010015464)	fuca2 (ENSSAUG00010015469)	ENSSAUG00010015470	dusp23a (ENSSAUG00010015472)	txlnbb (ENSSAUG00010015473)	ENSSAUG00010015475	slc22a3 (ENSSAUG00010015477)	gng2 (ENSSAUG00010015479) #15	frmd6 (ENSSAUG00010015480) #16	tmx1 (ENSSAUG00010015486) #17	trim9 (ENSSAUG00010015489) #18	pygl (ENSSAUG00010015559) #19	ENSSAUG00010015761	NIN (ENSSAUG00010015766) #21	sav1 (ENSSAUG00010015771) #22	atl1 (ENSSAUG00010015816) #23	map4k5 (ENSSAUG00010016911) #24	cdkl1 (ENSSAUG00010019095) #25	ATP5S (ENSSAUG00010019100) #26	l2hgdh (ENSSAUG00010019105) #27	sos2 (ENSSAUG00010019122) #28	cdkn3 (ENSSAUG00010019195)	cnih1 (ENSSAUG00010019200)	gmfb (ENSSAUG00010019206)	si:ch211-10a23.2 (ENSSAUG00010019221)	plek2 (ENSSAUG00010019224)	TC2N (ENSSAUG00010019228)	fbln5 (ENSSAUG00010019241)	trip11 (ENSSAUG00010019284)	golga5 (ENSSAUG00010019392)
Ovalentaria	ANCESTRAL SPECIES	10	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Ovalentaria_B	ANCESTRAL SPECIES	24	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Pomacentridae	ANCESTRAL SPECIES	22	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Pomacentridae_A	ANCESTRAL SPECIES	31	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Amphiprion	ANCESTRAL SPECIES	27	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT01030000234576.D.a.b.a.b.a.a.a.a.a.e.a.b.a.b.b.b.a.a.a	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Orange clownfish	MODERN SPECIES	9	fuca2 (ENSAPEG00000010756)	ENSAPEG00000010731	txlnbb (ENSAPEG00000010716)	slc22a3 (ENSAPEG00000010610)	ENSAPEG00000010583	dusp23a (ENSAPEG00000010568)	gng2 (ENSAPEG00000010554) #15	frmd6 (ENSAPEG00000010495) #16	tmx1 (ENSAPEG00000010450) #17	ENSAPEG00000010424	trim9 (ENSAPEG00000010346) #18	ENSAPEG00000010322	pygl (ENSAPEG00000010216) #19	ENSAPEG00000010195	NIN (ENSAPEG00000010170) #21	sav1 (ENSAPEG00000010126) #22	atl1 (ENSAPEG00000009762) #23	map4k5 (ENSAPEG00000009635) #24	cdkl1 (ENSAPEG00000009582) #25	dmac2l (ENSAPEG00000009572) #26	l2hgdh (ENSAPEG00000009534) #27	sos2 (ENSAPEG00000009433) #28	cdkn3 (ENSAPEG00000009420)	cnih1 (ENSAPEG00000009412)	gmfb (ENSAPEG00000009400)	lgals3a (ENSAPEG00000009372)	synj2bp (ENSAPEG00000009357)	ENSAPEG00000009333	srsf5a (ENSAPEG00000009297)	pacs2 (ENSAPEG00000009223)	dcaf5 (ENSAPEG00000009209)
Clown anemonefish	MODERN SPECIES	2524	ENSAOCG00000000161	psmb8a (ENSAOCG00000004464)	psmb13a (ENSAOCG00000004660)	psmb12 (ENSAOCG00000000177)	psmb9a (ENSAOCG00000000185)	tap2a (ENSAOCG00000004762)	hsd17b8 (ENSAOCG00000004792)	brd2a (ENSAOCG00000004842)	ENSAOCG00000004863	col11a2 (ENSAOCG00000004956)	rxrba (ENSAOCG00000005008)	ENSAOCG00000005273	pygl (ENSAOCG00000005360) #19	ENSAOCG00000000251	NIN (ENSAOCG00000005435) #21	sav1 (ENSAOCG00000005468) #22	ENSAOCG00000005477 #23
Spiny chromis	MODERN SPECIES	282											ENSAPOG00000016133	ENSAPOG00000016149	pygl (ENSAPOG00000016221) #19	ENSAPOG00000016231	NIN (ENSAPOG00000016332) #21	sav1 (ENSAPOG00000016361) #22	atl1 (ENSAPOG00000016435) #23	map4k5 (ENSAPOG00000016995) #24	cdkl1 (ENSAPOG00000017062) #25	dmac2l (ENSAPOG00000017072) #26	l2hgdh (ENSAPOG00000017083) #27	sos2 (ENSAPOG00000017196) #28	cdkn3 (ENSAPOG00000017250)	cnih1 (ENSAPOG00000017286)	gmfb (ENSAPOG00000017297)	lgals3a (ENSAPOG00000017325)	synj2bp (ENSAPOG00000017333)	ENSAPOG00000017364	srsf5a (ENSAPOG00000017395)	pacs2 (ENSAPOG00000017546)	dcaf5 (ENSAPOG00000017559)
Bicolor damselfish	MODERN SPECIES	1703												trim9 (ENSSPAG00000021199) #18	pygl (ENSSPAG00000021159) #19	ENSSPAG00000021150	NIN (ENSSPAG00000021119) #21	sav1 (ENSSPAG00000021093) #22	atl1 (ENSSPAG00000020769) #23
Cichlidae	ANCESTRAL SPECIES	23	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000181344	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000001670	ENSGT00940000153169.A.b.b.e.a	ENSGT00940000165044	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00940000161139	ENSGT00940000159665	ENSGT00940000158248.a	ENSGT01090000260082.d.b.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	8	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000181344	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000001670	ENSGT00940000153169.A.b.b.e.a	ENSGT00940000165044	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00940000161139	ENSGT00940000159665	ENSGT00940000158248.a	ENSGT01090000260082.d.b.a
Nile tilapia	MODERN SPECIES	10	fuca2 (ENSONIG00000000569)	ENSONIG00000033220	txlnbb (ENSONIG00000000564)	ENSONIG00000039890	ENSONIG00000000562	ENSONIG00000029786	ENSONIG00000000561	gng2 (ENSONIG00000033131) #15	frmd6 (ENSONIG00000000556) #16	ENSONIG00000035994	tmx1 (ENSONIG00000000553) #17	trim9 (ENSONIG00000000549) #18	pygl (ENSONIG00000000534) #19	ENSONIG00000000531	NIN (ENSONIG00000000516) #21	sav1 (ENSONIG00000000514) #22	atl1 (ENSONIG00000000509) #23	map4k5 (ENSONIG00000000486) #24	cdkl1 (ENSONIG00000000483) #25	dmac2l (ENSONIG00000000480) #26	l2hgdh (ENSONIG00000000477) #27	sos2 (ENSONIG00000000467) #28	manba (ENSONIG00000000456)	UBE2D3 (ENSONIG00000015759)	ENSONIG00000000449	CPXM1 (ENSONIG00000000442)	wdr32 (ENSONIG00000000437)	HHIPL2 (ENSONIG00000000433)	ENSONIG00000000430	ENSONIG00000000429	ezra (ENSONIG00000000427)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	6	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000181344	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000001670	ENSGT00940000153169.A.b.b.e.a	ENSGT00940000165044	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00940000161139	ENSGT00940000159665	ENSGT00940000158248.a	ENSGT01090000260082.d.b.a
Haplochromini	ANCESTRAL SPECIES	7	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000181344	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000001670	ENSGT00940000153169.A.b.b.e.a	ENSGT00940000165044	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00940000161139	ENSGT00940000159665	ENSGT00940000158248.a	ENSGT01090000260082.d.b.a
Haplochromini_A	ANCESTRAL SPECIES	7	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000181344	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000001670	ENSGT00940000153169.A.b.b.e.a	ENSGT00940000165044	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00940000161139	ENSGT00940000159665	ENSGT00940000158248.a	ENSGT01090000260082.d.b.a
P. nyererei	MODERN SPECIES	365	COQ8A (ENSPNYG00000008700)	TATDN3 (ENSPNYG00000008719)	fuca2 (ENSPNYG00000008763)	ENSPNYG00000008792	txlnbb (ENSPNYG00000008806)	ENSPNYG00000008823	ENSPNYG00000008834	dusp23a (ENSPNYG00000008851)	gng2 (ENSPNYG00000008864) #15	frmd6 (ENSPNYG00000008878) #16	tmx1 (ENSPNYG00000008919) #17	trim9 (ENSPNYG00000008934) #18	pygl (ENSPNYG00000008972) #19	ENSPNYG00000009036	NIN (ENSPNYG00000009084) #21	sav1 (ENSPNYG00000009146) #22	atl1 (ENSPNYG00000009167) #23	map4k5 (ENSPNYG00000009211) #24	cdkl1 (ENSPNYG00000009280) #25	dmac2l (ENSPNYG00000009302) #26	l2hgdh (ENSPNYG00000009310) #27	sos2 (ENSPNYG00000009330) #28	manba (ENSPNYG00000009420)	ube2d3 (ENSPNYG00000009584)	ENSPNYG00000009597	CPXM1 (ENSPNYG00000009611)	wdr32 (ENSPNYG00000009649)	HHIPL2 (ENSPNYG00000009685)	ENSPNYG00000009755	ENSPNYG00000009783	ezra (ENSPNYG00000009797)
Haplochromini_B	ANCESTRAL SPECIES	13	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00600000085656.b	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000001670	ENSGT00940000153169.A.b.b.e.a	ENSGT00940000165044	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00940000161139	ENSGT00940000159665	ENSGT00940000158248.a	ENSGT01090000260082.d.b.a
Zebra mbuna	MODERN SPECIES	1101	COQ8A (ENSMZEG00005012612)	TATDN3 (ENSMZEG00005012601)	fuca2 (ENSMZEG00005012589)	ENSMZEG00005012545	txlnbb (ENSMZEG00005012534)	ENSMZEG00005012523	ENSMZEG00005012503	dusp23a (ENSMZEG00005012497)	gng2 (ENSMZEG00005012490) #15	frmd6 (ENSMZEG00005012459) #16	tmx1 (ENSMZEG00005012439) #17	trim9 (ENSMZEG00005012404) #18	pygl (ENSMZEG00005012363) #19	ENSMZEG00005012316	NIN (ENSMZEG00005012265) #21	sav1 (ENSMZEG00005012246) #22	atl1 (ENSMZEG00005012235) #23	ENSMZEG00005012227	cdkl1 (ENSMZEG00005012214) #25	dmac2l (ENSMZEG00005012201) #26	l2hgdh (ENSMZEG00005012194) #27	sos2 (ENSMZEG00005012159) #28	manba (ENSMZEG00005012134)	UBE2D3 (ENSMZEG00005012121)	ENSMZEG00005012109	CPXM1 (ENSMZEG00005012094)	wdr32 (ENSMZEG00005012075)	HHIPL2 (ENSMZEG00005012026)	ENSMZEG00005012000	ENSMZEG00005011997	ezra (ENSMZEG00005011983)
Eastern happy	MODERN SPECIES	10	TATDN3 (ENSACLG00000002742)	fuca2 (ENSACLG00000002674)	ENSACLG00000002640	txlnbb (ENSACLG00000002627)	ENSACLG00000002597	ENSACLG00000002440	ENSACLG00000002432	gng2 (ENSACLG00000002415) #15	frmd6 (ENSACLG00000002388) #16	tmx1 (ENSACLG00000002382) #17	trim9 (ENSACLG00000002349) #18	pygl (ENSACLG00000002281) #19	ENSACLG00000002265	NIN (ENSACLG00000002209) #21	ENSACLG00000002171	sav1 (ENSACLG00000002142) #22	atl1 (ENSACLG00000001983) #23	map4k5 (ENSACLG00000001932) #24	cdkl1 (ENSACLG00000001917) #25	dmac2l (ENSACLG00000001901) #26	l2hgdh (ENSACLG00000001887) #27	sos2 (ENSACLG00000001761) #28	manba (ENSACLG00000001591)	ube2d3 (ENSACLG00000001566)	ENSACLG00000001552	CPXM1 (ENSACLG00000001522)	wdr32 (ENSACLG00000001484)	HHIPL2 (ENSACLG00000001313)	ENSACLG00000001298	ENSACLG00000001281	ezra (ENSACLG00000001257)
Burton s mouthbrooder	MODERN SPECIES	747	COQ8A (ENSHBUG00000016972)	TATDN3 (ENSHBUG00000017006)	fuca2 (ENSHBUG00000017018)	ENSHBUG00000017037	txlnbb (ENSHBUG00000017044)	ENSHBUG00000017054	ENSHBUG00000017082	ENSHBUG00000017094	gng2 (ENSHBUG00000017104) #15	frmd6 (ENSHBUG00000017143) #16	tmx1 (ENSHBUG00000017152) #17	trim9 (ENSHBUG00000017221) #18	pygl (ENSHBUG00000017284) #19	ENSHBUG00000017299	ENSHBUG00000017316 #21	sav1 (ENSHBUG00000017339) #22	atl1 (ENSHBUG00000017388) #23	map4k5 (ENSHBUG00000017860) #24	cdkl1 (ENSHBUG00000017903) #25	dmac2l (ENSHBUG00000017926) #26	l2hgdh (ENSHBUG00000017954) #27	sos2 (ENSHBUG00000018068) #28	manba (ENSHBUG00000018443)	ube2d3 (ENSHBUG00000018489)
Lyretail cichlid	MODERN SPECIES	347	TATDN3 (ENSNBRG00000006795)	fuca2 (ENSNBRG00000006768)	ENSNBRG00000006753	txlnbb (ENSNBRG00000006736)	ENSNBRG00000006728	slc22a3 (ENSNBRG00000006691)	dusp23a (ENSNBRG00000006669)	gng2 (ENSNBRG00000006655) #15	frmd6 (ENSNBRG00000006621) #16	ENSNBRG00000006607 #17	ENSNBRG00000006592	trim9 (ENSNBRG00000006550) #18	pygl (ENSNBRG00000006472) #19	ENSNBRG00000006448	ENSNBRG00000006371 #21	sav1 (ENSNBRG00000006345) #22	atl1 (ENSNBRG00000006306) #23	map4k5 (ENSNBRG00000006149) #24	ENSNBRG00000006131 #25	cdkl1 (ENSNBRG00000006113) #25	l2hgdh (ENSNBRG00000006077) #27	sos2 (ENSNBRG00000006013) #28	manba (ENSNBRG00000005911)	ube2d3 (ENSNBRG00000005892)	ENSNBRG00000005829	CPXM1 (ENSNBRG00000005756)	wdr32 (ENSNBRG00000005731)	HHIPL2 (ENSNBRG00000005704)	ENSNBRG00000005671	ENSNBRG00000005663	ezra (ENSNBRG00000005644)
Midas cichlid	MODERN SPECIES	88	COQ8A (ENSACIG00000009392)	TATDN3 (ENSACIG00000009484)	fuca2 (ENSACIG00000009513)	ENSACIG00000009558	txlnbb (ENSACIG00000009672)	ENSACIG00000009704	ENSACIG00000009715	dusp23a (ENSACIG00000009728)	gng2 (ENSACIG00000009739) #15	frmd6 (ENSACIG00000009751) #16	tmx1 (ENSACIG00000009789) #17	trim9 (ENSACIG00000009816) #18	pygl (ENSACIG00000009854) #19	ENSACIG00000009904	NIN (ENSACIG00000009924) #21	sav1 (ENSACIG00000009978) #22	atl1 (ENSACIG00000010005) #23	map4k5 (ENSACIG00000010052) #24	cdkl1 (ENSACIG00000010229) #25	dmac2l (ENSACIG00000010261) #26	l2hgdh (ENSACIG00000010313) #27	sos2 (ENSACIG00000010346) #28	manba (ENSACIG00000010417)	UBE2D3 (ENSACIG00000010558)	ENSACIG00000011067	CPXM1 (ENSACIG00000011119)	wdr32 (ENSACIG00000011193)	HHIPL2 (ENSACIG00000011213)	MTARC2 (ENSACIG00000011236)	ENSACIG00000011270	ezra (ENSACIG00000011287)
Atherinomorphae	ANCESTRAL SPECIES	11	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.a	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Oryzias	ANCESTRAL SPECIES	3	ENSGT00390000014318	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.a	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b.p	ENSGT00950000182900.A.b
Oryzias_b	ANCESTRAL SPECIES	12													ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b.p	ENSGT00950000182900.A.b
Indian medaka	MODERN SPECIES		PCNX1 (ENSOMEG00000022653)	med6 (ENSOMEG00000022664)	TTC9 (ENSOMEG00000022674)	MAP3K9 (ENSOMEG00000022690)	slc8a3 (ENSOMEG00000022701)	ENSOMEG00000022724	cox16 (ENSOMEG00000022729)	ENSOMEG00000022736	actn1 (ENSOMEG00000000944)	dcaf5 (ENSOMEG00000022805)	ENSOMEG00000022815	pacs2 (ENSOMEG00000022842)	pygl (ENSOMEG00000022877) #19	ENSOMEG00000022894	ENSOMEG00000022920 #21	sav1 (ENSOMEG00000022933) #22	atl1 (ENSOMEG00000022948) #23	map4k5 (ENSOMEG00000023023) #24	cdkl1 (ENSOMEG00000023073) #25	dmac2l (ENSOMEG00000000623) #26	l2hgdh (ENSOMEG00000023093) #27	sos2 (ENSOMEG00000023114) #28	cdkn3 (ENSOMEG00000023134)	cnih1 (ENSOMEG00000023154)	gmfb (ENSOMEG00000023174)	lgals3a (ENSOMEG00000000627)	synj2bp (ENSOMEG00000023193)	ENSOMEG00000023208	srsf5a (ENSOMEG00000000628)	ENSOMEG00000023234	trim9 (ENSOMEG00000023261) #18
Javanese ricefish	MODERN SPECIES	14	ENSOJAG00000020877	tmx1 (ENSOJAG00000020867) #17	trim9 (ENSOJAG00000020848) #18	ENSOJAG00000020831	slc18b1 (ENSOJAG00000020813)	ENSOJAG00000020751	ENSOJAG00000020741	ENSOJAG00000020723	ENSOJAG00000020710	slc5a6b (ENSOJAG00000020568)	ENSOJAG00000020536	pygl (ENSOJAG00000016404) #19	ENSOJAG00000016283	ENSOJAG00000016264	ENSOJAG00000016244 #21	sav1 (ENSOJAG00000016231) #22	atl1 (ENSOJAG00000015650) #23	cdkl1 (ENSOJAG00000014592) #25	dmac2l (ENSOJAG00000014585) #26	l2hgdh (ENSOJAG00000014527) #27	cdkn3 (ENSOJAG00000014361)	cnih1 (ENSOJAG00000014306)	gmfb (ENSOJAG00000014273)	lgals3a (ENSOJAG00000014254)	synj2bp (ENSOJAG00000014245)	ENSOJAG00000014239	srsf5a (ENSOJAG00000014232)	pacs2 (ENSOJAG00000013842)	dcaf5 (ENSOJAG00000013766)	ENSOJAG00000013741	actn1 (ENSOJAG00000010349)
Oryzias_a	ANCESTRAL SPECIES	44	ENSGT00390000014318	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000182028	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b.p	ENSGT00950000182900.A.b
Chinese medaka	MODERN SPECIES	1294													frmd6 (ENSOSIG00000017469) #16	tmx1 (ENSOSIG00000017461) #17	ENSOSIG00000017327	sav1 (ENSOSIG00000017317) #22	atl1 (ENSOSIG00000017316) #23	map4k5 (ENSOSIG00000017244) #24	cdkl1 (ENSOSIG00000017230) #25	dmac2l (ENSOSIG00000017213) #26	cdkn3 (ENSOSIG00000017202)	cnih1 (ENSOSIG00000017191)	gmfb (ENSOSIG00000017187)	ENSOSIG00000017184	lgals3a (ENSOSIG00000017180)	synj2bp (ENSOSIG00000017178)	ENSOSIG00000017175	srsf5a (ENSOSIG00000017158)	ENSOSIG00000017103	dcaf5 (ENSOSIG00000017047)	actn1 (ENSOSIG00000002965)
Japanese Medaka HdrR	MODERN SPECIES	14	fuca2 (ENSORLG00000008832)	ENSORLG00000025518	ENSORLG00000024933	txlnbb (ENSORLG00000026561)	dusp23a (ENSORLG00000008858)	gng2 (ENSORLG00000008863) #15	frmd6 (ENSORLG00000008880) #16	tmx1 (ENSORLG00000008892) #17	trim9 (ENSORLG00000008897) #18	ENSORLG00000028423	ENSORLG00000025811	ENSORLG00000028868	pygl (ENSORLG00000008955) #19	ENSORLG00000008963	NIN (ENSORLG00000008987) #21	sav1 (ENSORLG00000008998) #22	atl1 (ENSORLG00000009054) #23	map4k5 (ENSORLG00000022884) #24	cdkl1 (ENSORLG00000009092) #25	dmac2l (ENSORLG00000009104) #26	l2hgdh (ENSORLG00000009117) #27	sos2 (ENSORLG00000009137) #28	cdkn3 (ENSORLG00000009158)	cnih1 (ENSORLG00000009172)	gmfb (ENSORLG00000029174)	lgals3a (ENSORLG00000009189)	ENSORLG00000029340	srsf5a (ENSORLG00000009268)	pacs2 (ENSORLG00000009340)	ENSORLG00000027914	dcaf5 (ENSORLG00000009348)
Cyprinodontiformes	ANCESTRAL SPECIES	21	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.a	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Aplocheiloidei	ANCESTRAL SPECIES	29	ENSGT00940000164252.a.b	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b	ENSGT00940000155548
Mangrove rivulus	MODERN SPECIES	1										frmd6 (ENSKMAG00000017721) #16	tmx1 (ENSKMAG00000017699) #17	trim9 (ENSKMAG00000017652) #18	pygl (ENSKMAG00000017560) #19	ENSKMAG00000017501	NIN (ENSKMAG00000017356) #21	sav1 (ENSKMAG00000017311) #22	atl1 (ENSKMAG00000017270) #23	ENSKMAG00000017247	map4k5 (ENSKMAG00000017215) #24	cdkl1 (ENSKMAG00000017165) #25	dmac2l (ENSKMAG00000017145) #26	l2hgdh (ENSKMAG00000017106) #27	sos2 (ENSKMAG00000017059) #28	cnih1 (ENSKMAG00000017031)	gmfb (ENSKMAG00000016991)	lgals3a (ENSKMAG00000016970)	synj2bp (ENSKMAG00000016960)	hdac11 (ENSKMAG00000016928)	GALNT16 (ENSKMAG00000016895)	numb (ENSKMAG00000016822)	exd2 (ENSKMAG00000016785)
Turquoise killifish	MODERN SPECIES	1625	MAP7 (ENSNFUG00015017149)	TATDN3 (ENSNFUG00015017133)	fuca2 (ENSNFUG00015017128)	HIVEP2 (ENSNFUG00015017090)	txlnbb (ENSNFUG00015017057)	ENSNFUG00015017027	DUSP23 (ENSNFUG00015017017)	GNG2 (ENSNFUG00015017006) #15	frmd6 (ENSNFUG00015016958) #16	TMX1 (ENSNFUG00015016940) #17	ENSNFUG00015016933	TRIM9 (ENSNFUG00015016904) #18	pygl (ENSNFUG00015015397) #19	ABHD12B (ENSNFUG00015015190)	ENSNFUG00015015149 #21	SAV1 (ENSNFUG00015015132) #22	atl1 (ENSNFUG00015014784) #23	map4k5 (ENSNFUG00015012360) #24	CDKL1 (ENSNFUG00015012235) #25	ATP5S (ENSNFUG00015012231) #26	L2HGDH (ENSNFUG00015012168) #27	sos2 (ENSNFUG00015011847) #28	ENSNFUG00015011778	ENSNFUG00015011768	cnih1 (ENSNFUG00015011755)	gmfb (ENSNFUG00015011728)	LGALS3 (ENSNFUG00015011711)	SYNJ2BP (ENSNFUG00015011703)	ENSNFUG00015011680	srsf5a (ENSNFUG00015011665)	ENSNFUG00015011661
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.a	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
NAME_4	ANCESTRAL SPECIES	29	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Mummichog	MODERN SPECIES	2299	SLC30A2 (ENSFHEG00000003310)	COQ8A (ENSFHEG00000003339)	TATDN3 (ENSFHEG00000003345)	fuca2 (ENSFHEG00000003353)	ENSFHEG00000003370	txlnbb (ENSFHEG00000003384)	ENSFHEG00000003403	dusp23a (ENSFHEG00000003413)	gng2 (ENSFHEG00000003525) #15	frmd6 (ENSFHEG00000003571) #16	tmx1 (ENSFHEG00000003585) #17	trim9 (ENSFHEG00000003610) #18	pygl (ENSFHEG00000003638) #19	ENSFHEG00000003649	ENSFHEG00000003668 #21	sav1 (ENSFHEG00000003690) #22	atl1 (ENSFHEG00000003724) #23	map4k5 (ENSFHEG00000000100) #24	cdkl1 (ENSFHEG00000003771) #25	dmac2l (ENSFHEG00000003781) #26	l2hgdh (ENSFHEG00000003811) #27	sos2 (ENSFHEG00000003852) #28	cdkn3 (ENSFHEG00000003859)	cnih1 (ENSFHEG00000003876)	ENSFHEG00000003886	lgals3a (ENSFHEG00000003903)	synj2bp (ENSFHEG00000003908)	ENSFHEG00000003925	srsf5a (ENSFHEG00000003955)	pacs2 (ENSFHEG00000004213)	dcaf5 (ENSFHEG00000004243)
Sheepshead minnow	MODERN SPECIES	788												frmd6 (ENSCVAG00000006600) #16	trim9 (ENSCVAG00000006454) #18	pygl (ENSCVAG00000006414) #19	ENSCVAG00000006366 #21	sav1 (ENSCVAG00000006351) #22	atl1 (ENSCVAG00000006338) #23	ENSCVAG00000006317	cdkl1 (ENSCVAG00000006239) #25	dmac2l (ENSCVAG00000006216) #26	l2hgdh (ENSCVAG00000006203) #27	sos2 (ENSCVAG00000006191) #28	cdkn3 (ENSCVAG00000006152)	cnih1 (ENSCVAG00000006133)
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.a	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704.c #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487.c	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Poecilia	ANCESTRAL SPECIES	10	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704.c #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487.d	ENSGT00940000166756	ENSGT00940000164487.c	ENSGT00940000164884
NAME_6	ANCESTRAL SPECIES	3	ENSGT00940000156072.a.b	ENSGT00940000156810.b.a.b	ENSGT00720000108846.a	ENSGT00440000035378.d	ENSGT00940000156512.b.a	ENSGT00940000157418.b	ENSGT00940000155089.s	ENSGT00940000161329	ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.d #21	ENSGT00940000156106 #22	ENSGT00940000158704.c #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487.d	ENSGT00940000166756	ENSGT00940000164487.c	ENSGT00940000164884
Amazon molly	MODERN SPECIES	381	COQ8A (ENSPFOG00000015960)	TATDN3 (ENSPFOG00000016075)	fuca2 (ENSPFOG00000016107)	ENSPFOG00000016130	txlnbb (ENSPFOG00000016143)	ENSPFOG00000023786	ENSPFOG00000016180	dusp23a (ENSPFOG00000016182)	gng2 (ENSPFOG00000016185) #15	frmd6 (ENSPFOG00000016189) #16	tmx1 (ENSPFOG00000016274) #17	trim9 (ENSPFOG00000022350) #18	pygl (ENSPFOG00000016318) #19	ENSPFOG00000016544	NIN (ENSPFOG00000016634) #21	sav1 (ENSPFOG00000024474) #22	atl1 (ENSPFOG00000023382) #23	atl1 (ENSPFOG00000016716) #23	map4k5 (ENSPFOG00000016773) #24	cdkl1 (ENSPFOG00000024403) #25	dmac2l (ENSPFOG00000017046) #26	l2hgdh (ENSPFOG00000024008) #27	sos2 (ENSPFOG00000017056) #28	ENSPFOG00000017057	ENSPFOG00000023277	ENSPFOG00000024197	cdkn3 (ENSPFOG00000017059)	cnih1 (ENSPFOG00000017080)	gmfb (ENSPFOG00000017083)	lgals3a (ENSPFOG00000017116)	synj2bp (ENSPFOG00000017143)
Sailfin molly	MODERN SPECIES	215						slc22a3 (ENSPLAG00000014414)	ENSPLAG00000014370	dusp23a (ENSPLAG00000014360)	gng2 (ENSPLAG00000014345) #15	frmd6 (ENSPLAG00000014332) #16	tmx1 (ENSPLAG00000014299) #17	trim9 (ENSPLAG00000014296) #18	pygl (ENSPLAG00000014269) #19	ENSPLAG00000014216	ENSPLAG00000014201 #21	sav1 (ENSPLAG00000014184) #22	atl1 (ENSPLAG00000014169) #23	map4k5 (ENSPLAG00000014134) #24	cdkl1 (ENSPLAG00000014094) #25	dmac2l (ENSPLAG00000014060) #26	l2hgdh (ENSPLAG00000014043) #27	sos2 (ENSPLAG00000000324) #28	cdkn3 (ENSPLAG00000013976)	cnih1 (ENSPLAG00000013970)
Guppy	MODERN SPECIES	453	dnajc5gb (ENSPREG00000017072)	SLC30A2 (ENSPREG00000017081)	COQ8A (ENSPREG00000017105)	TATDN3 (ENSPREG00000017124)	fuca2 (ENSPREG00000017138)	ENSPREG00000017157	txlnbb (ENSPREG00000017182)	dusp23a (ENSPREG00000017227)	gng2 (ENSPREG00000017234) #15	frmd6 (ENSPREG00000017254) #16	tmx1 (ENSPREG00000017301) #17	trim9 (ENSPREG00000017323) #18	pygl (ENSPREG00000017351) #19	ENSPREG00000017380	NIN (ENSPREG00000017437) #21	sav1 (ENSPREG00000017544) #22	atl1 (ENSPREG00000017576) #23	map4k5 (ENSPREG00000017690) #24	cdkl1 (ENSPREG00000017908) #25	dmac2l (ENSPREG00000017930) #26	l2hgdh (ENSPREG00000017955) #27	sos2 (ENSPREG00000017978) #28	cdkn3 (ENSPREG00000017997)	cnih1 (ENSPREG00000018017)	gmfb (ENSPREG00000018041)	lgals3a (ENSPREG00000018054)	synj2bp (ENSPREG00000018061)	ENSPREG00000018072	ENSPREG00000018087	srsf5a (ENSPREG00000018091)	pacs2 (ENSPREG00000018125)
Platyfish	MODERN SPECIES	10	COQ8A (ENSXMAG00000015084)	TATDN3 (ENSXMAG00000015058)	fuca2 (ENSXMAG00000022559)	ENSXMAG00000024594	ENSXMAG00000021773	txlnbb (ENSXMAG00000021249)	ENSXMAG00000015010	dusp23a (ENSXMAG00000015009)	gng2 (ENSXMAG00000015006) #15	frmd6 (ENSXMAG00000014965) #16	tmx1 (ENSXMAG00000024898) #17	trim9 (ENSXMAG00000014918) #18	pygl (ENSXMAG00000014865) #19	ENSXMAG00000014855	NIN (ENSXMAG00000014801) #21	sav1 (ENSXMAG00000014788) #22	atl1 (ENSXMAG00000014757) #23	map4k5 (ENSXMAG00000014674) #24	cdkl1 (ENSXMAG00000014662) #25	dmac2l (ENSXMAG00000022134) #26	l2hgdh (ENSXMAG00000014651) #27	sos2 (ENSXMAG00000014615) #28	cdkn3 (ENSXMAG00000007646)	cnih1 (ENSXMAG00000007643)	gmfb (ENSXMAG00000027642)	lgals3a (ENSXMAG00000012856)	synj2bp (ENSXMAG00000023772)	ENSXMAG00000012840	srsf5a (ENSXMAG00000012823)	pacs2 (ENSXMAG00000014578)	dcaf5 (ENSXMAG00000014575)
Cod	MODERN SPECIES	18	ENSGMOG00000012789	dnajc5gb (ENSGMOG00000012794)	ENSGMOG00000012796	ENSGMOG00000012801	fuca2 (ENSGMOG00000012806)	ENSGMOG00000023246	txlnbb (ENSGMOG00000012823)	ENSGMOG00000012832	GNG2 (ENSGMOG00000012836) #15	frmd6 (ENSGMOG00000014492) #16	tmx1 (ENSGMOG00000032005) #17	trim9 (ENSGMOG00000004306) #18	pygl (ENSGMOG00000001222) #19	ENSGMOG00000001208	ENSGMOG00000033372 #21	sav1 (ENSGMOG00000001104) #22	atl1 (ENSGMOG00000001077) #23	map4k5 (ENSGMOG00000001035) #24	cdkl1 (ENSGMOG00000001012) #25	dmac2l (ENSGMOG00000000997) #26	l2hgdh (ENSGMOG00000000988) #27	sos2 (ENSGMOG00000000951) #28	cdkn3 (ENSGMOG00000000936)	cnih1 (ENSGMOG00000000927)	gmfb (ENSGMOG00000036972)	lgals3a (ENSGMOG00000000894)	synj2bp (ENSGMOG00000000891)	ENSGMOG00000000881	srsf5a (ENSGMOG00000000869)	ENSGMOG00000000308	ENSGMOG00000018600
Protacanthopterygii	ANCESTRAL SPECIES	68											ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00660000095541.a.b.c.b #21	ENSGT00940000165086.a	ENSGT00660000095541.a.b.c.a #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a.d	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	337	ENSGT00940000160303.a.b	ENSGT00940000154607.a.c	ENSGT00510000048137.j	ENSGT00940000162505.b.f	ENSGT00940000156557.g	ENSGT00940000164041.b.b	ENSGT00390000016811.g.f	ENSGT00940000157133.f	ENSGT00940000166718.d	ENSGT00940000158839	ENSGT00500000044870.a	ENSGT00940000154790.a.a.a.b.b	ENSGT00940000154071.A.h.a #18	ENSGT00950000183148.a.a.a #19	ENSGT00660000095541.a.b.c.b #21	ENSGT00940000156106.g #22	ENSGT00940000158704.e #23	ENSGT00940000158072.g #24	ENSGT00940000158324.f.a #28	ENSGT00950000182834.A.a.a.d.b	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487.e	ENSGT00940000164884.d	ENSGT00950000183209.b.b.i	ENSGT00950000182900.A.b.j	ENSGT00940000155548.sb.b.a	ENSGT00520000055955	ENSGT00940000157547.g
Salmoninae_a	ANCESTRAL SPECIES	8	ENSGT00940000162505.b.f	ENSGT00940000175756.a	ENSGT00950000182963.a.a.c	ENSGT00940000156557.g	ENSGT00940000164041.b.b	ENSGT00390000016811.g.f	ENSGT00940000157133.f	ENSGT00940000166718.d	ENSGT01030000234555.a.b.f.b	ENSGT00940000158839	ENSGT00500000044870.a	ENSGT00940000154790.a.a.a.b.b	ENSGT00940000154071.A.h.a #18	ENSGT00950000183148.a.a.a #19	ENSGT00660000095541.a.b.c.b #21	ENSGT00940000156106.g #22	ENSGT00940000158704.e #23	ENSGT00940000158072.g #24	ENSGT00940000158324.f.a #28	ENSGT00950000182834.A.a.a.d.b	ENSGT00940000157224.ab	ENSGT00830000128402.a.b	ENSGT00940000164487.e	ENSGT00940000164884.d	ENSGT00950000183209.b.b.i	ENSGT00950000182900.A.b.j	ENSGT00940000155548.sb.b.a	ENSGT00520000055955	ENSGT00940000157547.g	ENSGT00940000161472.c.b	ENSGT00940000154782.d.c
Salmo	ANCESTRAL SPECIES	11	ENSGT00940000162505.b.f	ENSGT00940000175756.a	ENSGT00950000182963.a.a.c	ENSGT00940000156557.g	ENSGT00940000164041.b.b	ENSGT00390000016811.g.f	ENSGT00940000157133.f	ENSGT00940000166718.d	ENSGT01030000234555.a.b.f.b	ENSGT00940000158839	ENSGT00500000044870.a	ENSGT00940000154790.a.a.a.b.b	ENSGT00940000154071.A.h.a #18	ENSGT00950000183148.a.a.a #19	ENSGT00660000095541.a.b.c.b #21	ENSGT00940000156106.g #22	ENSGT00940000158704.e #23	ENSGT00940000158072.g #24	ENSGT00940000158324.f.b.a #28	ENSGT00950000182834.A.a.a.d.b	ENSGT00940000157224.ab	ENSGT00830000128402.a.b	ENSGT00940000164487.e	ENSGT00940000164884.d	ENSGT00950000183209.b.b.i	ENSGT00950000182900.A.b.j	ENSGT00940000155548.sb.b.a	ENSGT00970000197879	ENSGT00940000157547.g	ENSGT00940000161472.c.b	ENSGT00940000154782.d.c
Atlantic salmon	MODERN SPECIES	28	ENSSSAG00000095726	ENSSSAG00000108119	snx9a (ENSSSAG00000070769)	ENSSSAG00000083622	pomca (ENSSSAG00000095078)	dnajc27 (ENSSSAG00000118648)	ENSSSAG00000004795	ENSSSAG00000095109	ENSSSAG00000064209	ccdc28a (ENSSSAG00000064213)	ENSSSAG00000104417	ENSSSAG00000095709	trim9 (ENSSSAG00000034367) #18	pygl (ENSSSAG00000049653) #19	NIN (ENSSSAG00000118026) #21	sav1 (ENSSSAG00000103444) #22	atl1 (ENSSSAG00000049174) #23	map4k5 (ENSSSAG00000040875) #24	ENSSSAG00000099814	ENSSSAG00000039308 #28	ENSSSAG00000082438	cnih1 (ENSSSAG00000042132)	lgals3a (ENSSSAG00000010091)	synj2bp (ENSSSAG00000092630)	ENSSSAG00000049835	srsf5a (ENSSSAG00000049847)	pacs2 (ENSSSAG00000050143)	dcaf5 (ENSSSAG00000082426)	actn1 (ENSSSAG00000051995)	CN112 (ENSSSAG00000065205)	slc8a3 (ENSSSAG00000104926)
River trout	MODERN SPECIES	17	snx9a (ENSSTUG00000021494)	ENSSTUG00000021471	pomca (ENSSTUG00000021457)	dnajc27 (ENSSTUG00000021420)	ENSSTUG00000019850	ENSSTUG00000019786	ENSSTUG00000019782	ENSSTUG00000019762	ccdc28a (ENSSTUG00000019752)	smyd2a (ENSSTUG00000019459)	ENSSTUG00000029809	trim9 (ENSSTUG00000029728) #18	ENSSTUG00000029715	pygl (ENSSTUG00000028417) #19	NIN (ENSSTUG00000028323) #21	sav1 (ENSSTUG00000028304) #22	atl1 (ENSSTUG00000026893) #23	map4k5 (ENSSTUG00000026047) #24	ENSSTUG00000025968	sos2 (ENSSTUG00000022938) #28	cnih1 (ENSSTUG00000022810)	lgals3a (ENSSTUG00000022793)	synj2bp (ENSSTUG00000022780)	ENSSTUG00000022768	srsf5a (ENSSTUG00000022697)	pacs2 (ENSSTUG00000022218)	dcaf5 (ENSSTUG00000022130)	ENSSTUG00000022115	ENSSTUG00000022109	slc8a3 (ENSSTUG00000022100)	TTC9 (ENSSTUG00000022093)
Oncorhynchus	ANCESTRAL SPECIES	54	ENSGT00940000162505.b.f	ENSGT00940000175756.a	ENSGT00950000182963.a.a.c	ENSGT00940000156557.g	ENSGT00940000164041.b.b	ENSGT00390000016811.g.f	ENSGT00940000157133.f	ENSGT00940000166718.c.a.a	ENSGT01030000234555.a.b.f.b	ENSGT00940000158839	ENSGT00500000044870.a	ENSGT00940000154790.a.a.a.b.b	ENSGT00940000154071.A.h.a #18	ENSGT00950000183148.a.a.a #19	ENSGT00660000095541.a.b.c.b #21	ENSGT00940000156106.g #22	ENSGT00940000158704.e #23	ENSGT00940000158072.g #24	ENSGT00940000158324.f.a #28	ENSGT00950000182834.A.a.a.d.b
Rainbow trout	MODERN SPECIES	17	ENSOMYG00000052264	snx9a (ENSOMYG00000073053)	ENSOMYG00000057712	pomca (ENSOMYG00000048731)	dnajc27 (ENSOMYG00000049044)	ENSOMYG00000072083	ENSOMYG00000065975	ENSOMYG00000066811	ENSOMYG00000030619	ENSOMYG00000051910	ENSOMYG00000030565	ENSOMYG00000024326	pygl (ENSOMYG00000024285) #19	NIN (ENSOMYG00000057487) #21	ENSOMYG00000074814	sav1 (ENSOMYG00000024232) #22	atl1 (ENSOMYG00000024221) #23	map4k5 (ENSOMYG00000052517) #24	ENSOMYG00000049088 #28	cnih1 (ENSOMYG00000024376)	ENSOMYG00000058861	lgals3a (ENSOMYG00000024419)	ENSOMYG00000053875	ENSOMYG00000024446	srsf5a (ENSOMYG00000024465)	pacs2 (ENSOMYG00000024483)	ENSOMYG00000059317	dcaf5 (ENSOMYG00000024546)	actn1 (ENSOMYG00000062602)	cn112 (ENSOMYG00000075404)	slc8a3 (ENSOMYG00000037257)
Oncorhynchus_a	ANCESTRAL SPECIES	60	ENSGT00940000154607.a.c	ENSGT00510000048137.j	ENSGT00940000162505.b.f	ENSGT00940000156557.g	ENSGT00940000164041.b.b	ENSGT00390000016811.g.f	ENSGT00940000157133.f	ENSGT00940000166718.c.a.a	ENSGT01030000234555.a.b.f.b	ENSGT00940000158839	ENSGT00500000044870.a	ENSGT00940000154790.a.a.a.b.b	ENSGT00940000154071.A.h.a #18	ENSGT00950000183148.a.a.a #19	ENSGT00660000095541.a.b.c.b #21	ENSGT00940000156106.g #22	ENSGT00940000158704.e #23	ENSGT00940000158072.g #24
Coho salmon	MODERN SPECIES	5	ENSOKIG00005008427	snx9a (ENSOKIG00005008030)	ENSOKIG00005007988	pomca (ENSOKIG00005007948)	dnajc27 (ENSOKIG00005007784)	ENSOKIG00005007655	ENSOKIG00005007627	ENSOKIG00005007618	ENSOKIG00005007607	ENSOKIG00005007596	SMYD2 (ENSOKIG00005007510)	trim9 (ENSOKIG00005007454) #18	pygl (ENSOKIG00005004611) #19	ENSOKIG00005004181	NIN (ENSOKIG00005014194) #21	sav1 (ENSOKIG00005014189) #22	atl1 (ENSOKIG00005014178) #23	map4k5 (ENSOKIG00005011988) #24	ENSOKIG00005011742 #28	cnih1 (ENSOKIG00005011694)	ENSOKIG00005011658	ENSOKIG00005011635	lgals3a (ENSOKIG00005011609)	synj2bp (ENSOKIG00005011594)	ENSOKIG00005011572	srsf5a (ENSOKIG00005011531)	pacs2 (ENSOKIG00005011173)	dcaf5 (ENSOKIG00005011117)	ENSOKIG00005011108	actn1 (ENSOKIG00005008858)	ENSOKIG00005008722
Chinook salmon	MODERN SPECIES	3039														trim9 (ENSOTSG00005035539) #18	pygl (ENSOTSG00005035547) #19	sav1 (ENSOTSG00005035772) #22	atl1 (ENSOTSG00005035775) #23	ENSOTSG00005035776
Huchen	MODERN SPECIES	4722															ENSHHUG00000000904	sav1 (ENSHHUG00000000913) #22	atl1 (ENSHHUG00000000938) #23	ENSHHUG00000001086	ENSHHUG00000001113
Salmoninae	ANCESTRAL SPECIES	596												ENSGT00940000154071.A.h.b #18	ENSGT00950000183148.a.a.b #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.c.a.b.b.b #21	ENSGT00940000156106.h #22	ENSGT00940000158704.f #23	ENSGT00940000158072.h #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324.e #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a.d.a	ENSGT00390000008920.c.a	ENSGT00940000164487.f	ENSGT00940000164884.c
Salmoninae_a	ANCESTRAL SPECIES	62	ENSGT00940000157269.a.b	ENSGT00940000154607.a.d	ENSGT00510000048137.i	ENSGT00940000175756.b	ENSGT00390000016811.g.e	ENSGT00390000016811.h	ENSGT00390000002143.b.a	ENSGT00940000157133.e	ENSGT00950000183114.a.a	ENSGT01100000263495.E.m.a.b.a	ENSGT01100000264076.A.a	ENSGT00940000154071.A.h.b #18	ENSGT00950000183148.a.a.b #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.c.a.b.b.b #21	ENSGT00940000156106.h #22	ENSGT00940000158704.f #23	ENSGT00940000158072.h #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324.e #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a.d.a	ENSGT00390000008920.c.a	ENSGT01060000249440	ENSGT00990000211649	ENSGT00830000128402.b	ENSGT00830000128402.a.a	ENSGT00940000164487.f	ENSGT00940000164884.c
Oncorhynchus	ANCESTRAL SPECIES	60	ENSGT00940000158299.b	ENSGT00940000157269.a.b	ENSGT00940000154607.a.d	ENSGT00510000048137.i	ENSGT00940000175756.b	ENSGT00390000016811.g.e	ENSGT00390000002143.b.a	ENSGT00940000157133.e	ENSGT00950000183114.a.a	ENSGT01100000263495.E.m.a.b.a	ENSGT01100000264076.A.a	ENSGT00940000154071.A.h.b #18	ENSGT00950000183148.a.a.b #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.c.a.b.b.b #21	ENSGT00940000156106.h #22	ENSGT00940000158704.f #23	ENSGT00940000158072.h #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324.e #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a.d.a	ENSGT00390000008920.c.a	ENSGT01060000249440.a	ENSGT00990000211649	ENSGT00830000128402.a.a	ENSGT00940000164487.f	ENSGT00940000164884.c	ENSGT00950000183209.b.b.j
Rainbow trout	MODERN SPECIES	10	ENSOMYG00000055861	dnajc27 (ENSOMYG00000074771)	ENSOMYG00000074973	ENSOMYG00000050729	ENSOMYG00000069829	ENSOMYG00000073579	ENSOMYG00000050549	ENSOMYG00000072445	ENSOMYG00000077313	ENSOMYG00000014544	ENSOMYG00000073971	trim9 (ENSOMYG00000024311) #18	pygl (ENSOMYG00000014642) #19	ENSOMYG00000015041	NIN (ENSOMYG00000015170) #21	sav1 (ENSOMYG00000015163) #22	atl1 (ENSOMYG00000015151) #23	map4k5 (ENSOMYG00000064573) #24	ENSOMYG00000065168	cdkl1 (ENSOMYG00000015126) #25	dmac2l (ENSOMYG00000015115) #26	l2hgdh (ENSOMYG00000015105) #27	sos2 (ENSOMYG00000058042) #28	ENSOMYG00000050897	ENSOMYG00000077218	ENSOMYG00000076554	cdkn3 (ENSOMYG00000015092)	ENSOMYG00000059514	gmfb (ENSOMYG00000015078)	ENSOMYG00000069625	ENSOMYG00000015068
Oncorhynchus_a	ANCESTRAL SPECIES	70	ENSGT00940000156634.b.h.b	ENSGT00940000158614.l	ENSGT00940000158299.b	ENSGT00940000157269.a.b	ENSGT00940000154607.a.d	ENSGT00510000048137.i	ENSGT00940000159969.b.a.b	ENSGT00390000016811.g.e	ENSGT00390000002143.b.a	ENSGT00940000157133.e	ENSGT00950000183114.a.a	ENSGT00940000154071.A.h.b #18	ENSGT00950000183148.a.a.b #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.c.a.b.b.b #21	ENSGT00940000156106.h #22	ENSGT00940000158704.f #23	ENSGT00940000158072.h #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324.e #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a.d.a	ENSGT00390000008920.c.a	ENSGT01060000249440.a	ENSGT00990000211649	ENSGT00830000128402.a.a	ENSGT00940000164487.f	ENSGT00940000164884.c	ENSGT00950000183209.b.b.j
Coho salmon	MODERN SPECIES	27	ENSOKIG00005002478	SH3YL1 (ENSOKIG00005002486)	ENSOKIG00005002497	ENSOKIG00005002507	pomca (ENSOKIG00005002514)	EFR3B (ENSOKIG00005002729)	ENSOKIG00005003693	dnajc27 (ENSOKIG00005003701)	ENSOKIG00005003712	XDH (ENSOKIG00005004002)	ENSOKIG00005009434	trim9 (ENSOKIG00005009443) #18	pygl (ENSOKIG00005009568) #19	ENSOKIG00005010464	NIN (ENSOKIG00005010479) #21	sav1 (ENSOKIG00005010521) #22	atl1 (ENSOKIG00005010550) #23	map4k5 (ENSOKIG00005011002) #24	cdkl1 (ENSOKIG00005014097) #25	ENSOKIG00005014118	dmac2l (ENSOKIG00005014127) #26	l2hgdh (ENSOKIG00005014142) #27	sos2 (ENSOKIG00005014205) #28	cdkn3 (ENSOKIG00005014503)	cnih1 (ENSOKIG00005014515)	gmfb (ENSOKIG00005014523)	ENSOKIG00005014530	synj2bp (ENSOKIG00005014561)	ENSOKIG00005014571	srsf5a (ENSOKIG00005014590)	pacs2 (ENSOKIG00005014633)
Chinook salmon	MODERN SPECIES	2			ENSOTSG00005005103	slc39a9 (ENSOTSG00005005049)	ENSOTSG00005005045	med6 (ENSOTSG00005005044)	ENSOTSG00005005043	MAP3K9 (ENSOTSG00005005004)	ndufaf1 (ENSOTSG00005004988)	nusap1 (ENSOTSG00005004985)	ENSOTSG00005004983	chp1 (ENSOTSG00005004982)	lgmn (ENSOTSG00005004963)	ENSOTSG00005004958	ENSOTSG00005004952 #21	sav1 (ENSOTSG00005004948) #22	ENSOTSG00005004944	map4k5 (ENSOTSG00005004942) #24	cdkl1 (ENSOTSG00005004940) #25	dmac2l (ENSOTSG00005004939) #26	l2hgdh (ENSOTSG00005004938) #27	sos2 (ENSOTSG00005003827) #28	XDH (ENSOTSG00005003659)	dnajc27 (ENSOTSG00005003589)	SH3YL1 (ENSOTSG00005003588)	ENSOTSG00005003586	ENSOTSG00005003583	chrna2a (ENSOTSG00005003581)	ENSOTSG00005003573	ENSOTSG00005003566	ENSOTSG00005003565
Salmo	ANCESTRAL SPECIES	8	ENSGT00940000158299.b	ENSGT00940000157269.a.b	ENSGT00940000154607.a.d	ENSGT00510000048137.i	ENSGT00940000162505.b.e	ENSGT00390000016811.g.e	ENSGT00390000002143.b.a	ENSGT00940000157133.e	ENSGT00950000183114.a.a	ENSGT01100000263495.E.m.a.b.a	ENSGT01100000264076.A.a	ENSGT00940000154071.A.h.b #18	ENSGT00950000183148.a.a.b #19	ENSGT00940000165086.a	ENSGT00660000095541.a.b.c.a.a #21	ENSGT00940000156106.h #22	ENSGT00940000158704.f #23	ENSGT00940000158072.h #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324.e #28	ENSGT00940000161621.A.a.b.b.b.a.b.g.b	ENSGT00390000004717	ENSGT00950000182834.A.a.a.d.a	ENSGT00390000008920.c.a	ENSGT01060000249440	ENSGT00990000211649	ENSGT00830000128402.b	ENSGT00830000128402.a.a	ENSGT00940000164487.f
Atlantic salmon	MODERN SPECIES		ENSSSAG00000036357	pomca (ENSSSAG00000070765)	ENSSSAG00000070629	dnajc27 (ENSSSAG00000112028)	ENSSSAG00000106554	ENSSSAG00000039639	ENSSSAG00000083748	ENSSSAG00000116603	ENSSSAG00000107292	ENSSSAG00000058229	trim9 (ENSSSAG00000104684) #18	pygl (ENSSSAG00000036264) #19	ENSSSAG00000093779	NIN (ENSSSAG00000053915) #21	ENSSSAG00000092315	sav1 (ENSSSAG00000053919) #22	atl1 (ENSSSAG00000053952) #23	map4k5 (ENSSSAG00000055072) #24	cdkl1 (ENSSSAG00000099783) #25	dmac2l (ENSSSAG00000056816) #26	l2hgdh (ENSSSAG00000056846) #27	ENSSSAG00000108437	sos2 (ENSSSAG00000057156) #28	ENSSSAG00000119932	ENSSSAG00000057551	cdkn3 (ENSSSAG00000057565)	cnih1 (ENSSSAG00000057589)	gmfb (ENSSSAG00000100154)	ENSSSAG00000113199	synj2bp (ENSSSAG00000110913)	ENSSSAG00000102205
River trout	MODERN SPECIES	26	SH3YL1 (ENSSTUG00000018438)	alkal2b (ENSSTUG00000018465)	ENSSTUG00000018470	pomca (ENSSTUG00000018477)	EFR3B (ENSSTUG00000018507)	ENSSTUG00000018940	dnajc27 (ENSSTUG00000018946)	XDH (ENSSTUG00000019052)	ENSSTUG00000020969	ENSSTUG00000020978	ENSSTUG00000020986	trim9 (ENSSTUG00000021008) #18	pygl (ENSSTUG00000021153) #19	ENSSTUG00000024715	NIN (ENSSTUG00000024735) #21	sav1 (ENSSTUG00000024886) #22	atl1 (ENSSTUG00000024916) #23	ENSSTUG00000026264	map4k5 (ENSSTUG00000026301) #24	cdkl1 (ENSSTUG00000026888) #25	dmac2l (ENSSTUG00000026914) #26	l2hgdh (ENSSTUG00000026923) #27	sos2 (ENSSTUG00000026981) #28	ENSSTUG00000027132	ENSSTUG00000027150	cdkn3 (ENSSTUG00000027165)	cnih1 (ENSSTUG00000027189)	gmfb (ENSSTUG00000027219)	ENSSTUG00000027232	ENSSTUG00000027236	synj2bp (ENSSTUG00000027242)
Huchen	MODERN SPECIES	5481																sav1 (ENSHHUG00000006539) #22	atl1 (ENSHHUG00000006555) #23
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	14	ENSELUG00000029959	ENSELUG00000019414	ENSELUG00000019487	ccdc28a (ENSELUG00000019504)	ENSELUG00000026820	ENSELUG00000031575	smyd2a (ENSELUG00000019543)	ENSELUG00000027863	ENSELUG00000019555	ENSELUG00000019571	ENSELUG00000026521	trim9 (ENSELUG00000019700) #18	pygl (ENSELUG00000019760) #19	ENSELUG00000019932 #21	sav1 (ENSELUG00000034215) #22	sav1 (ENSELUG00000019971) #22	atl1 (ENSELUG00000020010) #23	map4k5 (ENSELUG00000020074) #24	cdkl1 (ENSELUG00000020093) #25	dmac2l (ENSELUG00000000887) #26	l2hgdh (ENSELUG00000020151) #27	sos2 (ENSELUG00000020188) #28	cdkn3 (ENSELUG00000020220)	cnih1 (ENSELUG00000020310)	gmfb (ENSELUG00000020331)	lgals3a (ENSELUG00000020355)	ENSELUG00000001564	synj2bp (ENSELUG00000020380)	ENSELUG00000020395	srsf5a (ENSELUG00000020439)	pacs2 (ENSELUG00000020492)
Northern pike	MODERN SPECIES	14	ENSELUG00000029307	ENSELUG00000029959	ENSELUG00000019414	ENSELUG00000019487	ccdc28a (ENSELUG00000019504)	ENSELUG00000026820	ENSELUG00000031575	smyd2a (ENSELUG00000019543)	ENSELUG00000027863	ENSELUG00000019555	ENSELUG00000019571	ENSELUG00000026521	trim9 (ENSELUG00000019700) #18	pygl (ENSELUG00000019760) #19	ENSELUG00000019932 #21	sav1 (ENSELUG00000034215) #22	sav1 (ENSELUG00000019971) #22	atl1 (ENSELUG00000020010) #23	map4k5 (ENSELUG00000020074) #24	cdkl1 (ENSELUG00000020093) #25	dmac2l (ENSELUG00000000887) #26	l2hgdh (ENSELUG00000020151) #27	sos2 (ENSELUG00000020188) #28	cdkn3 (ENSELUG00000020220)	cnih1 (ENSELUG00000020310)	gmfb (ENSELUG00000020331)	lgals3a (ENSELUG00000020355)	ENSELUG00000001564	synj2bp (ENSELUG00000020380)	ENSELUG00000020395	srsf5a (ENSELUG00000020439)
Otomorpha	ANCESTRAL SPECIES	236										ENSGT01100000263497.C #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Clupeiformes	ANCESTRAL SPECIES	25															ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884	ENSGT00950000183209.b.b	ENSGT00950000182900.A.b
Denticle herring	MODERN SPECIES		CMPK2 (ENSDCDG00000015655)	rsad2 (ENSDCDG00000015651)	rnf144aa (ENSDCDG00000015646)	id2a (ENSDCDG00000015640)	KIDINS220 (ENSDCDG00000015612)	MBOAT2 (ENSDCDG00000015048)	asap2a (ENSDCDG00000013621)	itgb1bp1 (ENSDCDG00000013600)	iah1 (ENSDCDG00000013594)	adam17a (ENSDCDG00000005437)	ywhaqb (ENSDCDG00000005379)	grhl1 (ENSDCDG00000005109)	klf11b (ENSDCDG00000005057)	ENSDCDG00000005055	tonsl (ENSDCDG00000005045)	sav1 (ENSDCDG00000005035) #22	atl1 (ENSDCDG00000003877) #23	map4k5 (ENSDCDG00000002874) #24	cdkl1 (ENSDCDG00000002842) #25	dmac2l (ENSDCDG00000002841) #26	l2hgdh (ENSDCDG00000002827) #27	sos2 (ENSDCDG00000002788) #28	cdkn3 (ENSDCDG00000002761)	cnih1 (ENSDCDG00000002756)	gmfb (ENSDCDG00000002752)	lgals3a (ENSDCDG00000002750)	synj2bp (ENSDCDG00000002748)	ENSDCDG00000002746	srsf5a (ENSDCDG00000002743)	pacs2 (ENSDCDG00000002720)	dcaf5 (ENSDCDG00000002709)
Atlantic herring	MODERN SPECIES	5	PDIA6 (ENSCHAG00000020474)	CCR6 (ENSCHAG00000020590)	PXDN (ENSCHAG00000020600)	MYT1L (ENSCHAG00000020739)	eipr1 (ENSCHAG00000021098)	trappc12 (ENSCHAG00000021281)	adi1 (ENSCHAG00000021510)	FILIP1 (ENSCHAG00000021514)	ENSCHAG00000021516	ENSCHAG00000021520	VASH1 (ENSCHAG00000021525)	fcf1 (ENSCHAG00000021532)	ENSCHAG00000021623	ENSCHAG00000021632	NIN (ENSCHAG00000000497) #21	sav1 (ENSCHAG00000000615) #22	atl1 (ENSCHAG00000001200) #23	map4k5 (ENSCHAG00000002930) #24	cdkl1 (ENSCHAG00000005857) #25	dmac2l (ENSCHAG00000005914) #26	l2hgdh (ENSCHAG00000005926) #27	sos2 (ENSCHAG00000006016) #28	cdkn3 (ENSCHAG00000007194)	cnih1 (ENSCHAG00000007212)	gmfb (ENSCHAG00000007299)	lgals3a (ENSCHAG00000007313)	synj2bp (ENSCHAG00000007322)	ENSCHAG00000007331	srsf5a (ENSCHAG00000007338)	pacs2 (ENSCHAG00000007374)	dcaf5 (ENSCHAG00000007730)
Otophysi	ANCESTRAL SPECIES	61											ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Characiphysae	ANCESTRAL SPECIES	9	ENSGT00940000157464	ENSGT00390000003512.q	ENSGT00940000156048.e.b.a	ENSGT00940000157680	ENSGT00390000009258	ENSGT00940000174741.A	ENSGT00740000116854.a	ENSGT00980000199379.a	ENSGT00940000155517 #16	ENSGT00950000183007.a.a.a.b	ENSGT00950000183007.b.f	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00940000164764.j.a	ENSGT00940000157908.g	ENSGT00400000022158.a.c	ENSGT00390000016042	ENSGT00600000084626	ENSGT00940000160573	ENSGT00390000007203	ENSGT00940000160735	ENSGT00390000015226.d	ENSGT00940000161547	ENSGT01030000234549.a.b
Characiphysae_b	ANCESTRAL SPECIES	29	ENSGT00940000157464	ENSGT00390000003512.q	ENSGT00940000156048.e.b.a	ENSGT00940000157680	ENSGT00390000009258	ENSGT00940000174741.A	ENSGT00740000116854.a	ENSGT00980000199379.a	ENSGT00940000155517 #16	ENSGT00950000183007.a.a.a.b	ENSGT00950000183007.b.f	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00940000164764.j.a	ENSGT00940000157908.g	ENSGT00400000022158.a.c	ENSGT00390000016042	ENSGT00600000084626	ENSGT00940000160573	ENSGT00390000007203	ENSGT00940000160735	ENSGT00390000015226.d	ENSGT00940000161547	ENSGT01030000234549.a.b
Characoidei	ANCESTRAL SPECIES	19	ENSGT00940000157464	ENSGT00390000003512.q	ENSGT00940000156048.e.b.a	ENSGT00940000157680	ENSGT00390000009258	ENSGT00940000174741.A	ENSGT00740000116854.a	ENSGT00980000199379.a	ENSGT00940000155517 #16	ENSGT00950000183007.a.a.a.b	ENSGT00950000183007.b.f	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #23	ENSGT00940000158072 #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00940000164764.j.a	ENSGT00940000157908.g	ENSGT00400000022158.a.c	ENSGT00390000016042	ENSGT00600000084626	ENSGT00940000160573	ENSGT00390000007203	ENSGT00940000160735	ENSGT00390000015226.d	ENSGT00940000161547	ENSGT01030000234549.a.b
Red-bellied piranha	MODERN SPECIES	45	urb2 (ENSPNAG00000013684)	ENSPNAG00000002880	ENSPNAG00000013646	ENSPNAG00000013639	ENSPNAG00000013603	ENSPNAG00000002830	ENSPNAG00000013563	ENSPNAG00000013540	frmd6 (ENSPNAG00000002800) #16	ENSPNAG00000013489	irgf1 (ENSPNAG00000002770)	tmx1 (ENSPNAG00000013470) #17	trim9 (ENSPNAG00000013466) #18	pygl (ENSPNAG00000013405) #19	NIN (ENSPNAG00000013309) #21	sav1 (ENSPNAG00000002640) #22	atl1 (ENSPNAG00000002623) #23	map4k5 (ENSPNAG00000013153) #24	cdkl1 (ENSPNAG00000002502) #25	dmac2l (ENSPNAG00000012970) #26	klc4 (ENSPNAG00000002482)	PTK7 (ENSPNAG00000012880)	srfb (ENSPNAG00000002394)	tmem254 (ENSPNAG00000012736)	ENSPNAG00000002368	STK32C (ENSPNAG00000012642)	ENSPNAG00000012617	PWWP2B (ENSPNAG00000012612)	INPP5A (ENSPNAG00000002313)	nkx6.2 (ENSPNAG00000012538)	valopa (ENSPNAG00000002282)
Mexicana tetra	MODERN SPECIES	17	ENSAMXG00000034488	ENSAMXG00000003471	ENSAMXG00000033983	ENSAMXG00000039028	ENSAMXG00000003437	frmd6 (ENSAMXG00000029589) #16	ENSAMXG00000003336	ENSAMXG00000003370	ENSAMXG00000034005	ENSAMXG00000003353	ENSAMXG00000041738	tmx1 (ENSAMXG00000031685) #17	trim9 (ENSAMXG00000041762) #18	pygl (ENSAMXG00000003277) #19	NIN (ENSAMXG00000003264) #21	sav1 (ENSAMXG00000003247) #22	atl1 (ENSAMXG00000003230) #23	map4k5 (ENSAMXG00000003211) #24	cdkl1 (ENSAMXG00000003187) #25	dmac2l (ENSAMXG00000034511) #26	ENSAMXG00000003156	PTK7 (ENSAMXG00000003135)	srfb (ENSAMXG00000036408)	tmem254 (ENSAMXG00000029400)	ENSAMXG00000003097	STK32C (ENSAMXG00000034789)	LRRC27 (ENSAMXG00000003084)	PWWP2B (ENSAMXG00000003080)	INPP5A (ENSAMXG00000039185)	nkx6.2 (ENSAMXG00000003030)	ENSAMXG00000038086
Electric eel	MODERN SPECIES	343						ENSEEEG00000016463	urb2 (ENSEEEG00000016462)	ENSEEEG00000016460	ENSEEEG00000016458	frmd6 (ENSEEEG00000016456) #16	ENSEEEG00000016454	irgf1 (ENSEEEG00000016453)	tmx1 (ENSEEEG00000016451) #17	trim9 (ENSEEEG00000016450) #18	pygl (ENSEEEG00000013848) #19	sav1 (ENSEEEG00000013319) #22	atl1 (ENSEEEG00000013295) #23	map4k5 (ENSEEEG00000013251) #24	dmac2l (ENSEEEG00000013246) #26	ENSEEEG00000013143	ENSEEEG00000013123	ENSEEEG00000013122	ENSEEEG00000013119	gfm1 (ENSEEEG00000012450)	lxn (ENSEEEG00000012438)	MFSD1 (ENSEEEG00000012431)
Channel catfish	MODERN SPECIES	22	ENSIPUG00000020275	DTX4 (ENSIPUG00000020192)	ENSIPUG00000020164	FRMD6 (ENSIPUG00000020133) #16	ENSIPUG00000020125	ENSIPUG00000020118	ENSIPUG00000020111	ENSIPUG00000020099	ENSIPUG00000019892	IRGC (ENSIPUG00000019872)	ENSIPUG00000019864	tmx1 (ENSIPUG00000019849) #17	TRIM9 (ENSIPUG00000019785) #18	Pygl (ENSIPUG00000019705) #19	nin (ENSIPUG00000019650) #21	sav1 (ENSIPUG00000019636) #22	ATL1 (ENSIPUG00000019583) #23	map4k5 (ENSIPUG00000019520) #24	cdkl1 (ENSIPUG00000019505) #25	ATP5S (ENSIPUG00000019488) #26	ENSIPUG00000019464	PTK7 (ENSIPUG00000019376)	srf (ENSIPUG00000019339)	Tmem254 (ENSIPUG00000019312)	srr (ENSIPUG00000019247)	STK32C (ENSIPUG00000019224)	ENSIPUG00000019201	PWWP2B (ENSIPUG00000019195)	inpp5a (ENSIPUG00000019113)	nkx6-2 (ENSIPUG00000019098)	valopa (ENSIPUG00000019050)
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES	38	ENSGT00390000018691.c	ENSGT00940000159673	ENSGT00940000158836.a.a.f	ENSGT00940000158836.a.a.e	ENSGT00390000006996	ENSGT01030000234620.a.b.a.l	ENSGT00940000156540.a	ENSGT00730000111179.b	ENSGT00940000154656.ob.a.r	ENSGT00940000156116.A	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A.h #18	ENSGT00950000183148.a #19	ENSGT00660000095541.a.b #21	ENSGT00940000156106.k #22	ENSGT00940000158704 #23	ENSGT00940000158072.i #24	ENSGT00940000159132.a #25	ENSGT00940000156502 #26	ENSGT00490000043421 #27	ENSGT00940000158324 #28	ENSGT00610000087459	ENSGT00770000121713	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00940000157224.ab	ENSGT00830000128402	ENSGT00940000164487	ENSGT00940000164884
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	4	ENSGT00390000018691.c	ENSGT00940000159673.e.a.b	ENSGT00940000159673.f	ENSGT00940000158836.a.a.e.b	ENSGT00390000006996.d	ENSGT01030000234620.a.b.a.l.a	ENSGT00940000156540.a.j	ENSGT00730000111179.b.e	ENSGT00940000154656.ob.a.r.d	ENSGT00940000156116.A.j	ENSGT00940000155517.hc.b #16	ENSGT00940000155959.y #17	ENSGT00940000154071.A.h.e #18	ENSGT00950000183148.a.d #19	ENSGT00660000095541.a.b.f #21	ENSGT00940000156106.k.a #22	ENSGT00940000158704.g #23	ENSGT00940000158072.i.b #24	ENSGT00940000159132.a #25	ENSGT00940000156502.l #26	ENSGT00490000043421.c #27	ENSGT00940000158324.c #28	ENSGT00390000004717.b	ENSGT00950000182834.A.a.a.a.b	ENSGT00610000087459	ENSGT00390000004717.a.a	ENSGT00950000182834.A.a.a.b	ENSGT00390000008920.c.a.v	ENSGT00940000157224.ab.a	ENSGT00830000128402.d	ENSGT00940000164487.g
Goldfish	MODERN SPECIES	31	snapc1b (ENSCARG00000067057)	SYT16 (ENSCARG00000067038)	SGPP1 (ENSCARG00000067030)	wdr89 (ENSCARG00000067020)	ppp2r5eb (ENSCARG00000066940)	KCNH5 (ENSCARG00000066795)	gphb5 (ENSCARG00000066764)	ENSCARG00000066653	ENSCARG00000066627	esr2b (ENSCARG00000066586)	frmd6 (ENSCARG00000066575) #16	tmx1 (ENSCARG00000066571) #17	trim9 (ENSCARG00000066349) #18	pygl (ENSCARG00000065926) #19	ENSCARG00000065878 #21	sav1 (ENSCARG00000065867) #22	atl1 (ENSCARG00000065851) #23	map4k5 (ENSCARG00000064526) #24	cdkl1 (ENSCARG00000064250) #25	dmac2l (ENSCARG00000064200) #26	l2hgdh (ENSCARG00000063734) #27	sos2 (ENSCARG00000063132) #28	cdkn3 (ENSCARG00000062835)	cnih1 (ENSCARG00000062669)	gmfb (ENSCARG00000062635)	lgals3a (ENSCARG00000062594)	synj2bp (ENSCARG00000062546)	ENSCARG00000062522	srsf5a (ENSCARG00000062419)	pacs2 (ENSCARG00000060687)	dcaf5 (ENSCARG00000060456)
Cyprininae_a	ANCESTRAL SPECIES	167	ENSGT00390000018691.c	ENSGT00940000159673.e.a.b	ENSGT00940000159673.f	ENSGT00940000158836.a.a.e.b	ENSGT00390000006996.d	ENSGT01030000234620.a.b.a.l.a	ENSGT00940000156540.a.j	ENSGT00730000111179.b.e	ENSGT00940000154656.ob.a.r.d	ENSGT00940000156116.A.j	ENSGT00940000155517.hc.b #16	ENSGT00940000155959.y #17	ENSGT00940000154071.A.h.e #18	ENSGT00950000183148.a.d #19	ENSGT00660000095541.a.b.f #21	ENSGT00940000156106.k.a #22	ENSGT00940000158704.g #23	ENSGT00940000158072.i.b #24	ENSGT00940000159132.a #25	ENSGT00940000156502.l #26	ENSGT00490000043421.c #27	ENSGT00940000158324.c #28	ENSGT00610000087459	ENSGT00390000004717.a.a	ENSGT00950000182834.A.a.a.b	ENSGT00950000182834.A.a.a.a.b	ENSGT00390000008920.c.a.v	ENSGT00940000157224.ab.a	ENSGT00830000128402.d	ENSGT00940000164487.g	ENSGT00940000164884.b
Common carp reference	MODERN SPECIES	48	snapc1b (ENSCCRG00000015272)	ENSCCRG00000015269	SGPP1 (ENSCCRG00000035624)	wdr89 (ENSCCRG00000024106)	ppp2r5eb (ENSCCRG00000058261)	ENSCCRG00000009186	gphb5 (ENSCCRG00000009182)	ENSCCRG00000059465	ENSCCRG00000008355	esr2b (ENSCCRG00000009130)	frmd6 (ENSCCRG00000009100) #16	tmx1 (ENSCCRG00000067705) #17	trim9 (ENSCCRG00000008966) #18	pygl (ENSCCRG00000048706) #19	NIN (ENSCCRG00000064301) #21	sav1 (ENSCCRG00000080017) #22	atl1 (ENSCCRG00000051970) #23	map4k5 (ENSCCRG00000051982) #24	cdkl1 (ENSCCRG00000059722) #25	dmac2l (ENSCCRG00000035279) #26	l2hgdh (ENSCCRG00000065961) #27	sos2 (ENSCCRG00000013765) #28	ENSCCRG00000039000	cdkn3 (ENSCCRG00000078983)	cnih1 (ENSCCRG00000072593)	gmfb (ENSCCRG00000042874)	lgals3a (ENSCCRG00000042888)	synj2bp (ENSCCRG00000062583)	srsf5a (ENSCCRG00000055045)	pacs2 (ENSCCRG00000015639)	dcaf5 (ENSCCRG00000073212)
Golden-line barbel	MODERN SPECIES	337	snapc1b (ENSSGRG00000025886)	ENSSGRG00000025885	ENSSGRG00000025884	SGPP1 (ENSSGRG00000025883)	wdr89 (ENSSGRG00000025882)	ppp2r5eb (ENSSGRG00000025618)	ENSSGRG00000025610	gphb5 (ENSSGRG00000025609)	ENSSGRG00000025593	ENSSGRG00000025592	esr2b (ENSSGRG00000025581)	tmx1 (ENSSGRG00000025574) #17	trim9 (ENSSGRG00000025572) #18	pygl (ENSSGRG00000025030) #19	NIN (ENSSGRG00000025005) #21	sav1 (ENSSGRG00000025004) #22	ENSSGRG00000025003 #22	atl1 (ENSSGRG00000024002) #23	map4k5 (ENSSGRG00000021569) #24	cdkl1 (ENSSGRG00000021522) #25	dmac2l (ENSSGRG00000021521) #26	l2hgdh (ENSSGRG00000021335) #27	sos2 (ENSSGRG00000020279) #28	cdkn3 (ENSSGRG00000020242)	cnih1 (ENSSGRG00000020183)	gmfb (ENSSGRG00000020181)	lgals3a (ENSSGRG00000020180)	ENSSGRG00000020178	srsf5a (ENSSGRG00000020137)	pacs2 (ENSSGRG00000019440)	dcaf5 (ENSSGRG00000019409)
Cyprininae	ANCESTRAL SPECIES	86		ENSGT00940000159673.e.b	ENSGT00940000158836.a.a.e.a	ENSGT00390000006996.c	ENSGT01030000234620.a.b.a.l.b	ENSGT00940000156540.a.i	ENSGT00730000111179.b.f	ENSGT00940000154656.pb.d	ENSGT00940000154656.ob.a.r.c	ENSGT00940000156116.A.i	ENSGT00940000155517.hc.a #16	ENSGT00940000155959.z #17	ENSGT00940000154071.A.h.f #18	ENSGT00950000183148.a.c #19	ENSGT00660000095541.a.b.e #21	ENSGT00940000156106.k.b #22	ENSGT00940000158704.h #23	ENSGT00940000158072.i.a #24	ENSGT00940000156502.k #26	ENSGT00490000043421.d #27	ENSGT00940000158324.d #28	ENSGT00390000004717.a.b	ENSGT00950000182834.A.a.a.a.a	ENSGT00390000008920.c.a.u	ENSGT00940000157224.ab.b	ENSGT00830000128402.c	ENSGT00940000164487.h	ENSGT00940000164884.a	ENSGT00950000183209.b.b.h	ENSGT00950000182900.A.b.g	ENSGT00940000155548.db
Goldfish	MODERN SPECIES	4	ENSCARG00000036315	ENSCARG00000036328	ENSCARG00000036334	SYT16 (ENSCARG00000036358)	SGPP1 (ENSCARG00000036371)	ppp2r5eb (ENSCARG00000036391)	KCNH5 (ENSCARG00000036613)	gphb5 (ENSCARG00000036755)	ENSCARG00000036761	esr2b (ENSCARG00000036798)	frmd6 (ENSCARG00000036946) #16	tmx1 (ENSCARG00000001934) #17	trim9 (ENSCARG00000001975) #18	pygl (ENSCARG00000002133) #19	NIN (ENSCARG00000002423) #21	sav1 (ENSCARG00000002441) #22	atl1 (ENSCARG00000002487) #23	map4k5 (ENSCARG00000002640) #24	sos2 (ENSCARG00000003925) #28	cdkn3 (ENSCARG00000004166)	cnih1 (ENSCARG00000004428)	gmfb (ENSCARG00000004527)	lgals3a (ENSCARG00000004547)	synj2bp (ENSCARG00000004555)	ENSCARG00000004567	srsf5a (ENSCARG00000004628)	pacs2 (ENSCARG00000004727)	dcaf5 (ENSCARG00000005960)	actn1 (ENSCARG00000006047)	cox16 (ENSCARG00000006851)	slc8a3 (ENSCARG00000006857)
Cyprininae_a	ANCESTRAL SPECIES	29	ENSGT00940000172760	ENSGT00940000159673.e.a.a	ENSGT00940000158836.a.a.e.a	ENSGT00390000006996.c	ENSGT01030000234620.a.b.a.l.b	ENSGT00940000156540.a.i	ENSGT00730000111179.b.f	ENSGT00940000154656.pb.d	ENSGT00940000154656.ob.a.r.c	ENSGT00940000156116.A.i	ENSGT00940000155517.hc.a #16	ENSGT00940000155959.z #17	ENSGT00940000154071.A.h.f #18	ENSGT00950000183148.a.c #19	ENSGT00660000095541.a.b.e #21	ENSGT00940000156106.k.b #22	ENSGT00940000158704.h #23	ENSGT00940000158072.i.a #24	ENSGT00940000156502.k #26	ENSGT00490000043421.d #27	ENSGT00940000158324.d #28	ENSGT00390000004717.a.b	ENSGT00950000182834.A.a.a.a.a	ENSGT00390000008920.c.a.u	ENSGT00940000157224.ab.b	ENSGT00830000128402.c	ENSGT00940000164487.h	ENSGT00940000164884.a	ENSGT00950000183209.b.b.h	ENSGT00950000182900.A.b.g	ENSGT00940000155548.db.a
Common carp reference	MODERN SPECIES	18	ENSCCRG00000015354	SGPP1 (ENSCCRG00000057083)	wdr89 (ENSCCRG00000056451)	ppp2r5eb (ENSCCRG00000009429)	ENSCCRG00000020792	gphb5 (ENSCCRG00000004500)	ENSCCRG00000020799	ENSCCRG00000065687	ENSCCRG00000009163	esr2b (ENSCCRG00000057096)	frmd6 (ENSCCRG00000078082) #16	tmx1 (ENSCCRG00000009080) #17	trim9 (ENSCCRG00000057312) #18	pygl (ENSCCRG00000077930) #19	NIN (ENSCCRG00000042967) #21	sav1 (ENSCCRG00000049836) #22	atl1 (ENSCCRG00000049847) #23	map4k5 (ENSCCRG00000050264) #24	dmac2l (ENSCCRG00000080950) #26	l2hgdh (ENSCCRG00000069914) #27	sos2 (ENSCCRG00000039026) #28	cdkn3 (ENSCCRG00000014792)	cnih1 (ENSCCRG00000038706)	gmfb (ENSCCRG00000038650)	lgals3a (ENSCCRG00000038657)	synj2bp (ENSCCRG00000064821)	ENSCCRG00000079219	srsf5a (ENSCCRG00000018331)	pacs2 (ENSCCRG00000046580)	ENSCCRG00000079464	dcaf5 (ENSCCRG00000014471)
Golden-line barbel	MODERN SPECIES	465	ENSSGRG00000010004	SYT16 (ENSSGRG00000010003)	SGPP1 (ENSSGRG00000010001)	wdr89 (ENSSGRG00000009999)	ppp2r5eb (ENSSGRG00000007208)	ENSSGRG00000007175	gphb5 (ENSSGRG00000007174)	ENSSGRG00000007164	ENSSGRG00000007163	esr2b (ENSSGRG00000005532)	frmd6 (ENSSGRG00000005458) #16	tmx1 (ENSSGRG00000005456) #17	trim9 (ENSSGRG00000005455) #18	pygl (ENSSGRG00000004974) #19	NIN (ENSSGRG00000004939) #21	sav1 (ENSSGRG00000004935) #22	atl1 (ENSSGRG00000002906) #23	map4k5 (ENSSGRG00000000511) #24	cdkl1 (ENSSGRG00000000456) #25	dmac2l (ENSSGRG00000000453) #26	l2hgdh (ENSSGRG00000000413) #27	sos2 (ENSSGRG00000000204) #28	cdkn3 (ENSSGRG00000050821)	cnih1 (ENSSGRG00000050796)	gmfb (ENSSGRG00000050794)	lgals3a (ENSSGRG00000050791)	synj2bp (ENSSGRG00000050788)	ENSSGRG00000050784	srsf5a (ENSSGRG00000050775)	pacs2 (ENSSGRG00000050709)	dcaf5 (ENSSGRG00000050695)
Zebrafish	MODERN SPECIES	4	ppp2r5eb (ENSDARG00000069118)	KCNH5 (ENSDARG00000069117)	gphb5 (ENSDARG00000027472)	ENSDARG00000095514	ENSDARG00000093025	ENSDARG00000092369	ENSDARG00000093000	ENSDARG00000093940	ENSDARG00000053484	esr2b (ENSDARG00000034181)	frmd6 (ENSDARG00000002332) #16	tmx1 (ENSDARG00000019487) #17	trim9 (ENSDARG00000039123) #18	pygl (ENSDARG00000002197) #19	NIN (ENSDARG00000060298) #21	sav1 (ENSDARG00000006196) #22	atl1 (ENSDARG00000060481) #23	map4k5 (ENSDARG00000039125) #24	cdkl1 (ENSDARG00000017329) #25	dmac2l (ENSDARG00000012072) #26	l2hgdh (ENSDARG00000060500) #27	sos2 (ENSDARG00000060506) #28	ENSDARG00000092721	ENSDARG00000092896	cdkn3 (ENSDARG00000039130)	cnih1 (ENSDARG00000020311)	gmfb (ENSDARG00000028327)	lgals3a (ENSDARG00000077850)	synj2bp (ENSDARG00000028321)	ENSDARG00000116341	srsf5a (ENSDARG00000029818)
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000156106.l #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000156106.l #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000156106.l #22
Golden-line barbel	MODERN SPECIES	337	ENSSGRG00000025885	ENSSGRG00000025884	SGPP1 (ENSSGRG00000025883)	wdr89 (ENSSGRG00000025882)	ppp2r5eb (ENSSGRG00000025618)	ENSSGRG00000025610	gphb5 (ENSSGRG00000025609)	ENSSGRG00000025593	ENSSGRG00000025592	esr2b (ENSSGRG00000025581)	tmx1 (ENSSGRG00000025574) #17	trim9 (ENSSGRG00000025572) #18	pygl (ENSSGRG00000025030) #19	NIN (ENSSGRG00000025005) #21	sav1 (ENSSGRG00000025004) #22	ENSSGRG00000025003 #22	atl1 (ENSSGRG00000024002) #23	map4k5 (ENSSGRG00000021569) #24	cdkl1 (ENSSGRG00000021522) #25	dmac2l (ENSSGRG00000021521) #26	l2hgdh (ENSSGRG00000021335) #27	sos2 (ENSSGRG00000020279) #28	cdkn3 (ENSSGRG00000020242)	cnih1 (ENSSGRG00000020183)	gmfb (ENSSGRG00000020181)	lgals3a (ENSSGRG00000020180)	ENSSGRG00000020178	srsf5a (ENSSGRG00000020137)	pacs2 (ENSSGRG00000019440)	dcaf5 (ENSSGRG00000019409)	actn1 (ENSSGRG00000011426)