Murinae	ANCESTRAL SPECIES	8	ENSGT00940000156452 #8	ENSGT00950000183181.B.a #9	ENSGT00390000012397 #10	ENSGT00940000160102 #11	ENSGT00390000011698.c.b #12	ENSGT00940000156159 #13	ENSGT01050000248157	ENSGT00550000074912 #14	ENSGT00910000144250 #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #24	ENSGT00940000158072 #25	ENSGT00940000159132.a #26	ENSGT00940000156502 #27	ENSGT00490000043421 #28	ENSGT00940000158324 #29	ENSGT00940000157135 #30	ENSGT00940000156593 #31	ENSGT00390000018516 #33	ENSGT00940000157150 #34	ENSGT00940000157509 #35	ENSGT00390000012435 #36	ENSGT00900000143162 #37	ENSGT00510000048466	ENSGT00390000007341.a
Mus	ANCESTRAL SPECIES	10	ENSGT00940000156452 #8	ENSGT00950000183181.B.a #9	ENSGT00390000012397 #10	ENSGT00940000160102 #11	ENSGT00390000011698.c.b #12	ENSGT00940000156159 #13	ENSGT01050000248157	ENSGT00550000074912 #14	ENSGT00910000144250 #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000158704 #24	ENSGT00940000158072 #25	ENSGT00940000159132.a #26	ENSGT00940000156502 #27	ENSGT00490000043421 #28	ENSGT00940000158324 #29	ENSGT00940000157135 #30	ENSGT00940000156593 #31	ENSGT00970000194876	ENSGT00390000018516 #33	ENSGT00940000157150 #34	ENSGT00940000157509 #35	ENSGT00390000012435 #36	ENSGT00900000143162 #37	ENSGT00510000048466
Mus_A	ANCESTRAL SPECIES	17	ENSGT00940000156452 #8	ENSGT00950000183181.B.a #9	ENSGT00390000012397 #10	ENSGT00940000160102 #11	ENSGT00390000011698.c.b #12	ENSGT00940000156159 #13	ENSGT01050000248157	ENSGT00550000074912 #14	ENSGT00910000144250 #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000153556.A.g.b #23	ENSGT00940000158704 #24	ENSGT00940000158072 #25	ENSGT00940000159132.a #26	ENSGT00940000156502 #27	ENSGT00490000043421 #28	ENSGT00940000158324 #29	ENSGT00940000157135 #30	ENSGT00940000156593 #31	ENSGT00970000194876	ENSGT00390000018516 #33	ENSGT00940000157150 #34	ENSGT00940000157509 #35	ENSGT00390000012435 #36	ENSGT00900000143162 #37
Ryukyu mouse	MODERN SPECIES	3	Gpr135 (MGP_CAROLIEiJ_G0017830) #7	Daam1 (MGP_CAROLIEiJ_G0017829) #8	Dact1 (MGP_CAROLIEiJ_G0017828) #9	2700049A03Rik (MGP_CAROLIEiJ_G0017827) #10	MGP_CAROLIEiJ_G0017826 #11	Tomm20l (MGP_CAROLIEiJ_G0017825) #12	Arid4a (MGP_CAROLIEiJ_G0017824) #13	Psma3 (MGP_CAROLIEiJ_G0017823) #14	Actr10 (MGP_CAROLIEiJ_G0017822) #15	Frmd6 (MGP_CAROLIEiJ_G0017821) #16	Tmx1 (MGP_CAROLIEiJ_G0017820) #17	Trim9 (MGP_CAROLIEiJ_G0017819) #18	Pygl (MGP_CAROLIEiJ_G0017818) #19	Abhd12b (MGP_CAROLIEiJ_G0017817) #20	Nin (MGP_CAROLIEiJ_G0017816) #21	Sav1 (MGP_CAROLIEiJ_G0017815) #22	MGP_CAROLIEiJ_G0017814 #23	Atl1 (MGP_CAROLIEiJ_G0017813) #24	Map4k5 (MGP_CAROLIEiJ_G0017812) #25	Cdkl1 (MGP_CAROLIEiJ_G0017811) #26	Dmac2l (MGP_CAROLIEiJ_G0017810) #27	L2hgdh (MGP_CAROLIEiJ_G0017809) #28	Sos2 (MGP_CAROLIEiJ_G0017808) #29	Vcpkmt (MGP_CAROLIEiJ_G0017807) #30	Arf6 (MGP_CAROLIEiJ_G0017806) #31	MGP_CAROLIEiJ_G0017805 #32	Nemf (MGP_CAROLIEiJ_G0017804) #33	Klhdc2 (MGP_CAROLIEiJ_G0017803) #34	Klhdc1 (MGP_CAROLIEiJ_G0017802) #35	Pole2 (MGP_CAROLIEiJ_G0017801) #36	MGP_CAROLIEiJ_G0017800 #37
Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000156452 #8	ENSGT00950000183181.B.a #9	ENSGT00390000012397 #10	ENSGT00940000160102 #11	ENSGT00390000011698.c.b #12	ENSGT00940000156159 #13	ENSGT01050000248157	ENSGT00550000074912 #14	ENSGT00910000144250 #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000153556.A.g.b #23	ENSGT00940000158704 #24	ENSGT00940000158072 #25	ENSGT00940000159132.a #26	ENSGT00940000156502 #27	ENSGT00490000043421.g #28	ENSGT00940000158324 #29	ENSGT00940000157135 #30	ENSGT00940000156593 #31	ENSGT00970000194876	ENSGT00390000018516 #33	ENSGT00940000157150 #34	ENSGT00940000157509 #35	ENSGT00390000012435 #36	ENSGT00900000143162 #37
Mouse	MODERN SPECIES	3	Gpr135 (ENSMUSG00000043398) #7	Daam1 (ENSMUSG00000034574) #8	Dact1 (ENSMUSG00000044548) #9	2700049A03Rik (ENSMUSG00000034601) #10	Timm9 (ENSMUSG00000021079) #11	Tomm20l (ENSMUSG00000021078) #12	Arid4a (ENSMUSG00000048118) #13	Psma3 (ENSMUSG00000060073) #14	Actr10 (ENSMUSG00000021076) #15	Frmd6 (ENSMUSG00000048285) #16	Tmx1 (ENSMUSG00000021072) #17	Trim9 (ENSMUSG00000021071) #18	Pygl (ENSMUSG00000021069) #19	Abhd12b (ENSMUSG00000090121) #20	Nin (ENSMUSG00000021068) #21	Sav1 (ENSMUSG00000021067) #22	Atl1 (ENSMUSG00000021066) #24	Map4k5 (ENSMUSG00000034761) #25	Cdkl1 (ENSMUSG00000020990) #26	Dmac2l (ENSMUSG00000054894) #27	L2hgdh (ENSMUSG00000020988) #28	Sos2 (ENSMUSG00000034801) #29	Vcpkmt (ENSMUSG00000049882) #30	Arf6 (ENSMUSG00000044147) #31	Nemf (ENSMUSG00000020982) #33	Klhdc2 (ENSMUSG00000020978) #34	Klhdc1 (ENSMUSG00000051890) #35	Pole2 (ENSMUSG00000020974) #36	Dnaaf2 (ENSMUSG00000020973)	Mgat2 (ENSMUSG00000043998)	Gm49383 (ENSMUSG00000113149)
Mus_C	ANCESTRAL SPECIES	11	ENSGT00940000156452 #8	ENSGT00950000183181.B.a #9	ENSGT00390000012397 #10	ENSGT00940000160102 #11	ENSGT00390000011698.c.b #12	ENSGT00940000156159 #13	ENSGT01050000248157	ENSGT00550000074912 #14	ENSGT00910000144250 #15	ENSGT00940000155517 #16	ENSGT00940000155959 #17	ENSGT00940000154071.A #18	ENSGT00950000183148.a #19	ENSGT00940000161597 #20	ENSGT00660000095541.a.b #21	ENSGT00940000156106 #22	ENSGT00940000153556.A.g.b #23	ENSGT00940000158704 #24	ENSGT00940000158072 #25	ENSGT00940000159132.a #26	ENSGT00940000156502 #27	ENSGT00490000043421.g #28	ENSGT00940000158324 #29	ENSGT00940000157135 #30	ENSGT00940000156593 #31	ENSGT00970000194876	ENSGT00390000018516 #33	ENSGT00940000157150 #34	ENSGT00940000157509 #35	ENSGT00390000012435 #36	ENSGT00900000143162 #37
Steppe mouse	MODERN SPECIES	3136									ENSMSIG00000029303 #16	Tmx1 (ENSMSIG00000029286) #17	Trim9 (ENSMSIG00000029099) #18	Pygl (ENSMSIG00000029075) #19	Abhd12b (ENSMSIG00000029052) #20	Nin (ENSMSIG00000028959) #21	ENSMSIG00000028951	Sav1 (ENSMSIG00000028944) #22	Atl1 (ENSMSIG00000028917) #24	Map4k5 (ENSMSIG00000028803) #25	ENSMSIG00000028800	Cdkl1 (ENSMSIG00000028792) #26	Dmac2l (ENSMSIG00000028784) #27	L2hgdh (ENSMSIG00000028773) #28	Sos2 (ENSMSIG00000028726) #29	Vcpkmt (ENSMSIG00000028718) #30	ENSMSIG00000028714	Arf6 (ENSMSIG00000028712) #31	Nemf (ENSMSIG00000028656) #33	Klhdc2 (ENSMSIG00000028652) #34	Klhdc1 (ENSMSIG00000028633) #35	Pole2 (ENSMSIG00000028607) #36	Dnaaf2 (ENSMSIG00000028604)
spretus	MODERN SPECIES	3	Gpr135 (MGP_SPRETEiJ_G0018675) #7	Daam1 (MGP_SPRETEiJ_G0018674) #8	Dact1 (MGP_SPRETEiJ_G0018673) #9	2700049A03Rik (MGP_SPRETEiJ_G0018672) #10	Timm9 (MGP_SPRETEiJ_G0018671) #11	Tomm20l (MGP_SPRETEiJ_G0018670) #12	Arid4a (MGP_SPRETEiJ_G0018669) #13	Psma3 (MGP_SPRETEiJ_G0018668) #14	Actr10 (MGP_SPRETEiJ_G0018667) #15	Frmd6 (MGP_SPRETEiJ_G0018666) #16	Tmx1 (MGP_SPRETEiJ_G0018665) #17	Trim9 (MGP_SPRETEiJ_G0018664) #18	Pygl (MGP_SPRETEiJ_G0018663) #19	Abhd12b (MGP_SPRETEiJ_G0018662) #20	Nin (MGP_SPRETEiJ_G0018661) #21	Sav1 (MGP_SPRETEiJ_G0018660) #22	MGP_SPRETEiJ_G0018659 #23	Atl1 (MGP_SPRETEiJ_G0018658) #24	Map4k5 (MGP_SPRETEiJ_G0018657) #25	Cdkl1 (MGP_SPRETEiJ_G0018656) #26	Dmac2l (MGP_SPRETEiJ_G0018655) #27	L2hgdh (MGP_SPRETEiJ_G0018654) #28	Sos2 (MGP_SPRETEiJ_G0018653) #29	Vcpkmt (MGP_SPRETEiJ_G0018652) #30	Arf6 (MGP_SPRETEiJ_G0018651) #31	MGP_SPRETEiJ_G0018650	Nemf (MGP_SPRETEiJ_G0018649) #33	Klhdc2 (MGP_SPRETEiJ_G0018648) #34	Klhdc1 (MGP_SPRETEiJ_G0018647) #35	Pole2 (MGP_SPRETEiJ_G0018646) #36	MGP_SPRETEiJ_G0018645 #37
Shrew mouse	MODERN SPECIES	20	Gpr135 (MGP_PahariEiJ_G0029586) #7	Daam1 (MGP_PahariEiJ_G0029585) #8	Dact1 (MGP_PahariEiJ_G0029584) #9	2700049A03Rik (MGP_PahariEiJ_G0029583) #10	Timm9 (MGP_PahariEiJ_G0029582) #11	Tomm20l (MGP_PahariEiJ_G0029581) #12	Arid4a (MGP_PahariEiJ_G0029580) #13	Psma3 (MGP_PahariEiJ_G0029579) #14	Actr10 (MGP_PahariEiJ_G0029578) #15	Frmd6 (MGP_PahariEiJ_G0029577) #16	Tmx1 (MGP_PahariEiJ_G0029576) #17	Trim9 (MGP_PahariEiJ_G0029575) #18	Pygl (MGP_PahariEiJ_G0029574) #19	Abhd12b (MGP_PahariEiJ_G0029573) #20	Nin (MGP_PahariEiJ_G0029572) #21	Sav1 (MGP_PahariEiJ_G0029571) #22	MGP_PahariEiJ_G0029570	Atl1 (MGP_PahariEiJ_G0029569) #24	Map4k5 (MGP_PahariEiJ_G0029568) #25	Cdkl1 (MGP_PahariEiJ_G0029567) #26	Dmac2l (MGP_PahariEiJ_G0029566) #27	L2hgdh (MGP_PahariEiJ_G0029565) #28	Sos2 (MGP_PahariEiJ_G0029564) #29	Vcpkmt (MGP_PahariEiJ_G0029563) #30	Arf6 (MGP_PahariEiJ_G0029562) #31	MGP_PahariEiJ_G0029561	MGP_PahariEiJ_G0029560 #33	Klhdc2 (MGP_PahariEiJ_G0029559) #34	Klhdc1 (MGP_PahariEiJ_G0029558) #35	Pole2 (MGP_PahariEiJ_G0029557) #36	MGP_PahariEiJ_G0029556 #37
Rat	MODERN SPECIES	16	AABR07064753.1 (ENSRNOG00000032924)	Dact1 (ENSRNOG00000008445) #9	LOC690035 (ENSRNOG00000008244) #10	Timm9 (ENSRNOG00000008222) #11	Tomm20l (ENSRNOG00000054663) #12	Arid4a (ENSRNOG00000026239) #13	ENSRNOG00000062478	Psma3 (ENSRNOG00000007851) #14	Actr10 (ENSRNOG00000007504) #15	Frmd6 (ENSRNOG00000007329) #16	Tmx1 (ENSRNOG00000057934) #17	Trim9 (ENSRNOG00000007031) #18	Pygl (ENSRNOG00000006388) #19	Abhd12b (ENSRNOG00000026855) #20	Nin (ENSRNOG00000005540) #21	Sav1 (ENSRNOG00000005264) #22	Atl1 (ENSRNOG00000005063) #24	Map4k5 (ENSRNOG00000004923) #25	Cdkl1 (ENSRNOG00000038720) #26	Dmac2l (ENSRNOG00000004893) #27	L2hgdh (ENSRNOG00000004857) #28	ENSRNOG00000067932	Sos2 (ENSRNOG00000004826) #29	Vcpkmt (ENSRNOG00000065305) #30	Arf6 (ENSRNOG00000070951) #31	AABR07064719.2 (ENSRNOG00000056128) #33	Klhdc2 (ENSRNOG00000004474) #34	AABR07064716.1 (ENSRNOG00000028058)	ENSRNOG00000066035	Klhdc1 (ENSRNOG00000004425) #35	Pole2 (ENSRNOG00000004242) #36