Rodentia ANCESTRAL SPECIES 2 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00940000163736 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000163340 Rodentia_B ANCESTRAL SPECIES 2 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 Myomorpha ANCESTRAL SPECIES 14 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000160680 #35 Muroidea ANCESTRAL SPECIES 11 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000160680 #35 Muroidea_A ANCESTRAL SPECIES 17 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.s.a ##34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 Cricetidae ANCESTRAL SPECIES 16 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.t #34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 Cricetinae ANCESTRAL SPECIES 10 ENSGT00390000013063 #7 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.t #34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 Golden Hamster MODERN SPECIES 645 Parl (ENSMAUG00000004411) #7 Abcc5 (ENSMAUG00000016654) #8 Eif2b5 (ENSMAUG00000018803) #9 Dvl3 (ENSMAUG00000018768) #10 Ap2m1 (ENSMAUG00000021138) #11 Abcf3 (ENSMAUG00000017666) #12 Vwa5b2 (ENSMAUG00000008822) #13 Alg3 (ENSMAUG00000019456) #14 Camk2n2 (ENSMAUG00000009092) #15 Ece2 (ENSMAUG00000011426) #16 Psmd2 (ENSMAUG00000014316) #17 ENSMAUG00000008684 #18 Eif4g1 (ENSMAUG00000021452) #19 Fam131a (ENSMAUG00000015455) #20 Clcn2 (ENSMAUG00000020728) #21 Polr2h (ENSMAUG00000016338) #22 Thpo (ENSMAUG00000018682) #23 Chrd (ENSMAUG00000019283) #24 Ephb3 (ENSMAUG00000012646) #25 Vps8 (ENSMAUG00000001955) #26 2510009E07Rik (ENSMAUG00000010164) #27 Ehhadh (ENSMAUG00000004866) #28 Map3k13 (ENSMAUG00000012001) #29 ENSMAUG00000017908 #30 Liph (ENSMAUG00000020980) #31 Senp2 (ENSMAUG00000016075) #32 Igf2bp2 (ENSMAUG00000008302) #33 ENSMAUG00000002746 #34 Etv5 (ENSMAUG00000016484) #35 Dgkg (ENSMAUG00000006899) #36 Crygs (ENSMAUG00000006202) #37 Chinese hamster chok1gshd MODERN SPECIES 382 Cyp2ab1 (ENSCGRG00001000606) Abcc5 (ENSCGRG00001020997) #8 ENSCGRG00001023699 Eif2b5 (ENSCGRG00001008638) #9 Dvl3 (ENSCGRG00001018864) #10 Ap2m1 (ENSCGRG00001011476) #11 Abcf3 (ENSCGRG00001000537) #12 Vwa5b2 (ENSCGRG00001020976) #13 Alg3 (ENSCGRG00001010029) #14 Ece2 (ENSCGRG00001019837) #16 Camk2n2 (ENSCGRG00001011488) #15 Psmd2 (ENSCGRG00001017872) #17 Eif4g1 (ENSCGRG00001024063) #18 Fam131a (ENSCGRG00001014728) #20 Clcn2 (ENSCGRG00001008852) #21 Polr2h (ENSCGRG00001004900) #22 Thpo (ENSCGRG00001010258) #23 Chrd (ENSCGRG00001016660) #24 Teddm3 (ENSCGRG00001008819) Ephb3 (ENSCGRG00001013531) #25 Vps8 (ENSCGRG00001018671) #26 2510009E07Rik (ENSCGRG00001016389) #27 Ehhadh (ENSCGRG00001017424) #28 Map3k13 (ENSCGRG00001019360) #29 ENSCGRG00001024021 #30 Liph (ENSCGRG00001010260) #31 Senp2 (ENSCGRG00001023472) #32 Igf2bp2 (ENSCGRG00001019401) #33 ENSCGRG00001010314 Tra2b (ENSCGRG00001012362) #34 Etv5 (ENSCGRG00001021130) #35 Cricetidae_B ANCESTRAL SPECIES 13 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.t #34 ENSGT00940000163340 ENSGT00940000160680 #35 Prairie vole MODERN SPECIES 126 Parl (ENSMOCG00000015256) #7 Cyp2ab1 (ENSMOCG00000006421) Abcc5 (ENSMOCG00000004720) #8 Eif2b5 (ENSMOCG00000016708) #9 Dvl3 (ENSMOCG00000012179) #10 Ap2m1 (ENSMOCG00000014484) #11 Abcf3 (ENSMOCG00000006812) #12 Vwa5b2 (ENSMOCG00000003248) #13 Alg3 (ENSMOCG00000017690) #14 Ece2 (ENSMOCG00000001939) #16 Camk2n2 (ENSMOCG00000012422) #15 Psmd2 (ENSMOCG00000016565) #17 Eif4g1 (ENSMOCG00000016131) #18 Fam131a (ENSMOCG00000009027) #20 Clcn2 (ENSMOCG00000001859) #21 Polr2h (ENSMOCG00000004886) #22 Thpo (ENSMOCG00000014210) #23 Chrd (ENSMOCG00000016712) #24 Ephb3 (ENSMOCG00000015859) #25 Vps8 (ENSMOCG00000017404) #26 2510009E07Rik (ENSMOCG00000021384) #27 Ehhadh (ENSMOCG00000016389) #28 Map3k13 (ENSMOCG00000009150) #29 ENSMOCG00000000347 #30 Liph (ENSMOCG00000017252) #31 Senp2 (ENSMOCG00000001811) #32 Igf2bp2 (ENSMOCG00000019099) #33 Tra2b (ENSMOCG00000021560) #34 Northern American deer mouse MODERN SPECIES 3 Cyp2ab1 (ENSPEMG00000010910) Abcc5 (ENSPEMG00000009351) #8 Eif2b5 (ENSPEMG00000009037) #9 Dvl3 (ENSPEMG00000017805) #10 Ap2m1 (ENSPEMG00000006895) #11 Abcf3 (ENSPEMG00000013382) #12 Vwa5b2 (ENSPEMG00000014803) #13 Alg3 (ENSPEMG00000011841) #14 Eef1akmt4 (ENSPEMG00000031228) Camk2n2 (ENSPEMG00000010089) #15 Ece2 (ENSPEMG00000000352) #16 Psmd2 (ENSPEMG00000011042) #17 Eif4g1 (ENSPEMG00000017256) #18 Fam131a (ENSPEMG00000028135) #20 Clcn2 (ENSPEMG00000008108) #21 Polr2h (ENSPEMG00000029633) #22 Thpo (ENSPEMG00000009973) #23 Chrd (ENSPEMG00000009578) #24 Teddm3 (ENSPEMG00000025801) Ephb3 (ENSPEMG00000024277) #25 Vps8 (ENSPEMG00000003807) #26 ENSPEMG00000029353 #27 Ehhadh (ENSPEMG00000010711) #28 Map3k13 (ENSPEMG00000014973) #29 Tmem41a (ENSPEMG00000000662) Liph (ENSPEMG00000010159) #31 Senp2 (ENSPEMG00000023466) #32 ENSPEMG00000028030 B3gnt5 (ENSPEMG00000011328) Lamp3 (ENSPEMG00000023896) ENSPEMG00000030166 Murinae ANCESTRAL SPECIES 13 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.s.a ##34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 Rat DUPLICATION Rat MODERN SPECIES 2 Cyp2ab1 (ENSRNOG00000042367) Abcc5 (ENSRNOG00000029178) #8 Rps15al2 (ENSRNOG00000032877) Eif2b5 (ENSRNOG00000038160) #9 Dvl3 (ENSRNOG00000001708) #10 Abcf3 (ENSRNOG00000001710) #12 Ap2m1 (ENSRNOG00000001709) #11 Vwa5b2 (ENSRNOG00000001707) #13 Alg3 (ENSRNOG00000001712) #14 Eef1akmt4 (ENSRNOG00000029529) Ece2 (ENSRNOG00000001715) #16 Psmd2 (ENSRNOG00000001719) #17 Eif4g1 (ENSRNOG00000001738) #18 Fam131a (ENSRNOG00000063031) #20 Clcn2 (ENSRNOG00000001742) #21 Polr2h (ENSRNOG00000001748) #22 Thpol1 (ENSRNOG00000046850) #23 Chrd (ENSRNOG00000001750) #24 RGD1563956 (ENSRNOG00000025014) RGD1560559 (ENSRNOG00000025031) Ephb3 (ENSRNOG00000031801) #25 Vps8 (ENSRNOG00000001764) #26 C11h3orf70 (ENSRNOG00000063811) #27 Ehhadh (ENSRNOG00000001770) #28 LOC120095693 (ENSRNOG00000039674) Map3k13 (ENSRNOG00000025423) #29 Tmem41a (ENSRNOG00000046283) Liph (ENSRNOG00000047894) #31 Senp2 (ENSRNOG00000001773) #32 Igf2bp2 (ENSRNOG00000025946) #33 AABR07034641.1 (ENSRNOG00000033115) Rat DUPLICATION Rat MODERN SPECIES 1 Pde6g (ENSRNOG00000069361) Tspan10 (ENSRNOG00000046076) Nploc4 (ENSRNOG00000036698) Faap100 (ENSRNOG00000036699) Fscn2 (ENSRNOG00000036700) Actg1 (ENSRNOG00000036701) Bahcc1 (ENSRNOG00000043102) ENSRNOG00000065844 Slc38a10 (ENSRNOG00000004604) Tepsin (ENSRNOG00000028161) Cep131 (ENSRNOG00000004430) Aatk (ENSRNOG00000004392) Baiap2 (ENSRNOG00000004049) Chmp6 (ENSRNOG00000004014) Rptor (ENSRNOG00000003821) AABR07030911.1 (ENSRNOG00000032442) #22 Nptx1 (ENSRNOG00000003741) Endov (ENSRNOG00000003699) Rnf213 (ENSRNOG00000029658) Slc26a11 (ENSRNOG00000030537) Sgsh (ENSRNOG00000064880) Card14 (ENSRNOG00000047367) Eif4a3 (ENSRNOG00000045791) Gaa (ENSRNOG00000047656) Ccdc40 (ENSRNOG00000059401) Tbc1d16 (ENSRNOG00000049758) Cbx4 (ENSRNOG00000063043) Cbx8 (ENSRNOG00000048113) Cbx2 (ENSRNOG00000049215) Rbfox3 (ENSRNOG00000003386) Engase (ENSRNOG00000027498) Rat MODERN SPECIES 9 Npc1 (ENSRNOG00000012016) Rmc1 (ENSRNOG00000012597) Riok3 (ENSRNOG00000023376) Tmem241 (ENSRNOG00000023412) Cables1 (ENSRNOG00000012795) Rbbp8 (ENSRNOG00000012899) Gata6 (ENSRNOG00000023433) ENSRNOG00000071008 Mib1 (ENSRNOG00000013281) Abhd3 (ENSRNOG00000029370) Snrpd1 (ENSRNOG00000013714) ENSRNOG00000065471 Esco1 (ENSRNOG00000014031) LOC103694176 (ENSRNOG00000065120) Greb1l (ENSRNOG00000023492) LOC120098305 (ENSRNOG00000030649) #22 Rock1 (ENSRNOG00000031092) Usp14 (ENSRNOG00000014981) Thoc1 (ENSRNOG00000015332) Sec13-ps2 (ENSRNOG00000068190) ENSRNOG00000066369 Colec12 (ENSRNOG00000016366) Cetn1 (ENSRNOG00000016409) Zfp136 (ENSRNOG00000016417) ENSRNOG00000069557 ENSRNOG00000069512 Mtmr1 (ENSRNOG00000002697) F8 (ENSRNOG00000031197) Fundc2 (ENSRNOG00000024066) Cmc4 (ENSRNOG00000056435) Vom2r75 (ENSRNOG00000022955) Mus ANCESTRAL SPECIES 13 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000156921 #16 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.s.a ##34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 Shrew mouse MODERN SPECIES 3 Cyp2ab1 (MGP_PahariEiJ_G0016278) Abcc5 (MGP_PahariEiJ_G0016279) #8 Eif2b5 (MGP_PahariEiJ_G0016280) #9 Dvl3 (MGP_PahariEiJ_G0016281) #10 Ap2m1 (MGP_PahariEiJ_G0016282) #11 Abcf3 (MGP_PahariEiJ_G0016283) #12 Vwa5b2 (MGP_PahariEiJ_G0016284) #13 Alg3 (MGP_PahariEiJ_G0016285) #14 Ece2 (MGP_PahariEiJ_G0016286) #16 Camk2n2 (MGP_PahariEiJ_G0016287) #15 MGP_PahariEiJ_G0016288 #17 MGP_PahariEiJ_G0016289 #17 MGP_PahariEiJ_G0016290 #18 Fam131a (MGP_PahariEiJ_G0016291) #20 Clcn2 (MGP_PahariEiJ_G0016292) #21 Polr2h (MGP_PahariEiJ_G0016293) #22 Thpo (MGP_PahariEiJ_G0016294) #23 Chrd (MGP_PahariEiJ_G0016295) #24 MGP_PahariEiJ_G0016296 Ephb3 (MGP_PahariEiJ_G0016297) #25 Vps8 (MGP_PahariEiJ_G0016298) #26 2510009E07Rik (MGP_PahariEiJ_G0016299) #27 Ehhadh (MGP_PahariEiJ_G0016300) #28 Map3k13 (MGP_PahariEiJ_G0016301) #29 Tmem41a (MGP_PahariEiJ_G0016302) Liph (MGP_PahariEiJ_G0016303) #31 Senp2 (MGP_PahariEiJ_G0016304) #32 Igf2bp2 (MGP_PahariEiJ_G0016305) #33 Tra2b (MGP_PahariEiJ_G0016306) ##34 Etv5 (MGP_PahariEiJ_G0016307) #35 Dgkg (MGP_PahariEiJ_G0016308) #36 Mus_A ANCESTRAL SPECIES 18 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000156921 #16 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.s.a ##34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 Ryukyu mouse MODERN SPECIES 7 Cyp2ab1 (MGP_CAROLIEiJ_G0020574) Abcc5 (MGP_CAROLIEiJ_G0020575) #8 Eif2b5 (MGP_CAROLIEiJ_G0020576) #9 Dvl3 (MGP_CAROLIEiJ_G0020577) #10 Ap2m1 (MGP_CAROLIEiJ_G0020578) #11 Abcf3 (MGP_CAROLIEiJ_G0020579) #12 Vwa5b2 (MGP_CAROLIEiJ_G0020580) #13 Alg3 (MGP_CAROLIEiJ_G0020581) #14 Ece2 (MGP_CAROLIEiJ_G0020582) #16 Camk2n2 (MGP_CAROLIEiJ_G0020583) #15 MGP_CAROLIEiJ_G0020584 #17 MGP_CAROLIEiJ_G0020585 #17 Eif4g1 (MGP_CAROLIEiJ_G0020586) #18 Fam131a (MGP_CAROLIEiJ_G0020587) #20 Clcn2 (MGP_CAROLIEiJ_G0020588) #21 Polr2h (MGP_CAROLIEiJ_G0020589) #22 Thpo (MGP_CAROLIEiJ_G0020590) #23 Chrd (MGP_CAROLIEiJ_G0020591) #24 Teddm3 (MGP_CAROLIEiJ_G0020592) Ephb3 (MGP_CAROLIEiJ_G0020593) #25 Vps8 (MGP_CAROLIEiJ_G0020594) #26 2510009E07Rik (MGP_CAROLIEiJ_G0020595) #27 Ehhadh (MGP_CAROLIEiJ_G0020596) #28 Map3k13 (MGP_CAROLIEiJ_G0020597) #29 Tmem41a (MGP_CAROLIEiJ_G0020598) Liph (MGP_CAROLIEiJ_G0020599) #31 Senp2 (MGP_CAROLIEiJ_G0020600) #32 Igf2bp2 (MGP_CAROLIEiJ_G0020601) #33 Tra2b (MGP_CAROLIEiJ_G0020602) ##34 Etv5 (MGP_CAROLIEiJ_G0020603) #35 Dgkg (MGP_CAROLIEiJ_G0020604) #36 Mus_B ANCESTRAL SPECIES 18 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000156921 #16 ENSGT00940000153386.B.c #17 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.s.a ##34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 Mouse MODERN SPECIES 7 Abcc5 (ENSMUSG00000022822) #8 Eif2b5 (ENSMUSG00000003235) #9 Dvl3 (ENSMUSG00000003233) #10 Ap2m1 (ENSMUSG00000022841) #11 Abcf3 (ENSMUSG00000003234) #12 Vwa5b2 (ENSMUSG00000046613) #13 Alg3 (ENSMUSG00000033809) #14 Eef1akmt4 (ENSMUSG00000115219) Eef1ece2 (ENSMUSG00000115293) Camk2n2 (ENSMUSG00000051146) #15 Ece2 (ENSMUSG00000022842) #16 Psmd2 (ENSMUSG00000006998) #17 Eif4g1 (ENSMUSG00000045983) #18 Fam131a (ENSMUSG00000050821) #20 Clcn2 (ENSMUSG00000022843) #21 Polr2h (ENSMUSG00000021018) #22 Thpo (ENSMUSG00000022847) #23 Chrd (ENSMUSG00000006958) #24 Teddm3 (ENSMUSG00000090356) Ephb3 (ENSMUSG00000005958) #25 Vps8 (ENSMUSG00000033653) #26 2510009E07Rik (ENSMUSG00000043391) #27 Ehhadh (ENSMUSG00000022853) #28 Map3k13 (ENSMUSG00000033618) #29 Tmem41a (ENSMUSG00000022856) Liph (ENSMUSG00000044626) #31 Senp2 (ENSMUSG00000022855) #32 Igf2bp2 (ENSMUSG00000033581) #33 Tra2b (ENSMUSG00000022858) ##34 Etv5 (ENSMUSG00000013089) #35 Dgkg (ENSMUSG00000022861) #36 Mus_C ANCESTRAL SPECIES 12 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000156921 #16 ENSGT00940000153386.B.c #17 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951.u #32 ENSGT00940000154913 #33 ENSGT00950000183009.s.a ##34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 ENSGT00940000160342 #37 spretus MODERN SPECIES 7 Cyp2ab1 (MGP_SPRETEiJ_G0021471) Abcc5 (MGP_SPRETEiJ_G0021472) #8 Eif2b5 (MGP_SPRETEiJ_G0021473) #9 Dvl3 (MGP_SPRETEiJ_G0021474) #10 Ap2m1 (MGP_SPRETEiJ_G0021475) #11 Abcf3 (MGP_SPRETEiJ_G0021476) #12 Vwa5b2 (MGP_SPRETEiJ_G0021477) #13 Alg3 (MGP_SPRETEiJ_G0021478) #14 Ece2 (MGP_SPRETEiJ_G0021479) #16 Camk2n2 (MGP_SPRETEiJ_G0021480) #15 MGP_SPRETEiJ_G0021481 #17 MGP_SPRETEiJ_G0021482 #17 Eif4g1 (MGP_SPRETEiJ_G0021483) #18 Fam131a (MGP_SPRETEiJ_G0021484) #20 Clcn2 (MGP_SPRETEiJ_G0021485) #21 Polr2h (MGP_SPRETEiJ_G0021486) #22 Thpo (MGP_SPRETEiJ_G0021487) #23 Chrd (MGP_SPRETEiJ_G0021488) #24 Ephb3 (MGP_SPRETEiJ_G0021489) #25 Vps8 (MGP_SPRETEiJ_G0021490) #26 2510009E07Rik (MGP_SPRETEiJ_G0021491) #27 Ehhadh (MGP_SPRETEiJ_G0021492) #28 Map3k13 (MGP_SPRETEiJ_G0021493) #29 Tmem41a (MGP_SPRETEiJ_G0021494) Liph (MGP_SPRETEiJ_G0021495) #31 Senp2 (MGP_SPRETEiJ_G0021496) #32 Igf2bp2 (MGP_SPRETEiJ_G0021497) #33 Etv5 (MGP_SPRETEiJ_G0021499) #35 Dgkg (MGP_SPRETEiJ_G0021500) #36 Crygs (MGP_SPRETEiJ_G0021501) #37 Tbccd1 (MGP_SPRETEiJ_G0021502) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2413 ENSMSIG00000030774 #22 2700097O09Rik (ENSMSIG00000030775) ENSMSIG00000030776 ENSMSIG00000030778 Baz1a (ENSMSIG00000030780) Cfl2 (ENSMSIG00000030790) Snx6 (ENSMSIG00000030794) Steppe mouse MODERN SPECIES 2014 Fam131a (ENSMSIG00000007799) #20 Clcn2 (ENSMSIG00000007825) #21 Polr2h (ENSMSIG00000008034) #22 Thpo (ENSMSIG00000008081) #23 Chrd (ENSMSIG00000008143) #24 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 757 ENSNGAG00000020075 Parl (ENSNGAG00000015430) #7 Eif2b5 (ENSNGAG00000023841) #9 Dvl3 (ENSNGAG00000010230) #10 Ap2m1 (ENSNGAG00000022188) #11 Abcf3 (ENSNGAG00000023909) #12 Vwa5b2 (ENSNGAG00000021963) #13 Alg3 (ENSNGAG00000008806) #14 Ece2 (ENSNGAG00000024299) #16 Camk2n2 (ENSNGAG00000024362) #15 Psmd2 (ENSNGAG00000010621) #17 ENSNGAG00000020539 #18 ENSNGAG00000022175 #18 Fam131a (ENSNGAG00000019596) #20 Clcn2 (ENSNGAG00000021473) #21 ENSNGAG00000023997 #22 Thpo (ENSNGAG00000024253) #23 Chrd (ENSNGAG00000002968) #24 Ephb3 (ENSNGAG00000023003) #25 Vps8 (ENSNGAG00000010229) #26 2510009E07Rik (ENSNGAG00000003496) #27 Ehhadh (ENSNGAG00000022028) #28 Map3k13 (ENSNGAG00000017162) #29 ENSNGAG00000016716 #30 Liph (ENSNGAG00000001457) #31 ENSNGAG00000022944 Senp2 (ENSNGAG00000019966) #32 ENSNGAG00000022590 Igf2bp2 (ENSNGAG00000012680) #33 Upper Galilee mountains blind mole rat MODERN SPECIES 1835 ENSNGAG00000018769 Pfkfb2 (ENSNGAG00000000896) Yod1 (ENSNGAG00000011252) AA986860 (ENSNGAG00000000410) Fcamr (ENSNGAG00000018120) Pigr (ENSNGAG00000019403) Fcmr (ENSNGAG00000020854) Il24 (ENSNGAG00000017137) Il20 (ENSNGAG00000017734) Il19 (ENSNGAG00000016846) ENSNGAG00000015806 #22 Il10 (ENSNGAG00000016509) Mapkapk2 (ENSNGAG00000005753) Dyrk3 (ENSNGAG00000015789) Eif2d (ENSNGAG00000017892) Rassf5 (ENSNGAG00000013948) Ikbke (ENSNGAG00000018023) Srgap2 (ENSNGAG00000017369) Fam72a (ENSNGAG00000000297) Avpr1b (ENSNGAG00000005328) Ctse (ENSNGAG00000017938) ENSNGAG00000019005 Slc26a9 (ENSNGAG00000012565) Pm20d1 (ENSNGAG00000000944) Slc41a1 (ENSNGAG00000011919) Rab29 (ENSNGAG00000015383) Lesser Egyptian jerboa MODERN SPECIES 54 ENSJJAG00000020951 Abcc5 (ENSJJAG00000018438) #8 Eif2b5 (ENSJJAG00000004949) #9 Dvl3 (ENSJJAG00000011264) #10 Ap2m1 (ENSJJAG00000024086) #11 Abcf3 (ENSJJAG00000014872) #12 Vwa5b2 (ENSJJAG00000011906) #13 Alg3 (ENSJJAG00000000348) #14 Camk2n2 (ENSJJAG00000023253) #15 Ece2 (ENSJJAG00000014145) #16 Psmd2 (ENSJJAG00000024332) #17 ENSJJAG00000020262 #18 ENSJJAG00000012185 #18 Fam131a (ENSJJAG00000019311) #20 Clcn2 (ENSJJAG00000015086) #21 Polr2h (ENSJJAG00000015574) #22 ENSJJAG00000018272 #23 Chrd (ENSJJAG00000020171) #24 ENSJJAG00000021068 Ephb3 (ENSJJAG00000002329) #25 Vps8 (ENSJJAG00000024356) #26 2510009E07Rik (ENSJJAG00000018683) #27 Ehhadh (ENSJJAG00000012085) #28 Map3k13 (ENSJJAG00000021115) #29 ENSJJAG00000015465 #30 Liph (ENSJJAG00000019318) #31 Senp2 (ENSJJAG00000023556) #32 Igf2bp2 (ENSJJAG00000015876) #33 Tra2b (ENSJJAG00000011893) #34 Etv5 (ENSJJAG00000008806) #35 Dgkg (ENSJJAG00000001970) #36 Kangaroo rat MODERN SPECIES 481 Parl (ENSDORG00000014935) #7 Cyp2ab1 (ENSDORG00000026348) Abcc5 (ENSDORG00000014941) #8 Eif2b5 (ENSDORG00000005107) #9 Dvl3 (ENSDORG00000004638) #10 Ap2m1 (ENSDORG00000004640) #11 Abcf3 (ENSDORG00000024153) #12 Vwa5b2 (ENSDORG00000007935) #13 Alg3 (ENSDORG00000007936) #14 Ece2 (ENSDORG00000007937) #16 Psmd2 (ENSDORG00000007939) #17 ENSDORG00000029000 #18 ENSDORG00000010226 #18 Fam131a (ENSDORG00000023946) #20 Clcn2 (ENSDORG00000010613) #21 Polr2h (ENSDORG00000027475) #22 ENSDORG00000010616 #23 Chrd (ENSDORG00000010617) #24 Ephb3 (ENSDORG00000003084) #25 ENSDORG00000025676 #26 ENSDORG00000008079 #26 Rodentia_A ANCESTRAL SPECIES 5 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00940000163736 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000163340 Hystricomorpha ANCESTRAL SPECIES 6 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 ENSGT00940000160342 #37 Hystricomorpha_a ANCESTRAL SPECIES 4 ENSGT00390000013063 #7 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000156921 #16 ENSGT00390000004940.a.a #15 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 ENSGT00940000160342 #37 Hystricomorpha_b ANCESTRAL SPECIES 9 ENSGT00390000013063 #7 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000156921 #16 ENSGT00390000004940.a.a #15 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000158024.C #25 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000163412 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000160680 #35 ENSGT00940000156768 #36 ENSGT00940000160342 #37 Degu DUPLICATION Degu MODERN SPECIES 167 ENSODEG00000012268 ENSODEG00000012404 EIF2B5 (ENSODEG00000012756) #9 DVL3 (ENSODEG00000012849) #10 AP2M1 (ENSODEG00000012988) #11 ABCF3 (ENSODEG00000013982) #12 VWA5B2 (ENSODEG00000013878) #13 ALG3 (ENSODEG00000013548) #14 ECE2 (ENSODEG00000015263) #16 CAMK2N2 (ENSODEG00000012896) #15 PSMD2 (ENSODEG00000013158) #17 ENSODEG00000013872 #18 ENSODEG00000012718 #18 FAM131A (ENSODEG00000013175) #20 CLCN2 (ENSODEG00000014349) #21 ENSODEG00000013008 #22 ENSODEG00000014007 #23 CHRD (ENSODEG00000013793) #24 ENSODEG00000013444 ENSODEG00000013783 EPHB3 (ENSODEG00000013528) #25 VPS8 (ENSODEG00000013592) #26 C3orf70 (ENSODEG00000013857) #27 Degu MODERN SPECIES 361 ENSODEG00000012519 ENSODEG00000020005 #22 RDH13 (ENSODEG00000011963) EPS8L1 (ENSODEG00000011275) PPP1R12C (ENSODEG00000010142) TNNT1 (ENSODEG00000010639) TNNI3 (ENSODEG00000011412) DNAAF3 (ENSODEG00000010996) SYT5 (ENSODEG00000011988) ENSODEG00000012643 TMEM86B (ENSODEG00000011909) ENSODEG00000011540 HSPBP1 (ENSODEG00000010633) BRSK1 (ENSODEG00000014498) TMEM150B (ENSODEG00000010863) KMT5C (ENSODEG00000010521) COX6B2 (ENSODEG00000010701) Long-tailed chinchilla MODERN SPECIES 127 PARL (ENSCLAG00000014470) #7 ENSCLAG00000016420 ABCC5 (ENSCLAG00000014609) #8 EIF2B5 (ENSCLAG00000012914) #9 DVL3 (ENSCLAG00000014292) #10 AP2M1 (ENSCLAG00000014315) #11 ABCF3 (ENSCLAG00000016152) #12 VWA5B2 (ENSCLAG00000012845) #13 ALG3 (ENSCLAG00000015577) #14 CAMK2N2 (ENSCLAG00000014688) #15 ECE2 (ENSCLAG00000012028) #16 PSMD2 (ENSCLAG00000015382) #17 EIF4G1 (ENSCLAG00000012942) #18 FAM131A (ENSCLAG00000013327) #20 CLCN2 (ENSCLAG00000015337) #21 POLR2H (ENSCLAG00000013016) #22 THPO (ENSCLAG00000013534) #23 CHRD (ENSCLAG00000017299) #24 EPHB3 (ENSCLAG00000012937) #25 VPS8 (ENSCLAG00000013054) #26 C3orf70 (ENSCLAG00000014228) #27 ENSCLAG00000011937 #28 ENSCLAG00000014449 #28 MAP3K13 (ENSCLAG00000014253) #29 ENSCLAG00000013974 LIPH (ENSCLAG00000014995) #31 SENP2 (ENSCLAG00000012512) #32 IGF2BP2 (ENSCLAG00000014808) #33 TRA2B (ENSCLAG00000015607) #34 ETV5 (ENSCLAG00000014773) #35 DGKG (ENSCLAG00000014904) #36 Guinea pig MODERN SPECIES 7 MAP6D1 (ENSCPOG00000013222) PARL (ENSCPOG00000013997) #7 ENSCPOG00000025499 ABCC5 (ENSCPOG00000011252) #8 EIF2B5 (ENSCPOG00000012458) #9 DVL3 (ENSCPOG00000026862) #10 AP2M1 (ENSCPOG00000012463) #11 ABCF3 (ENSCPOG00000012469) #12 VWA5B2 (ENSCPOG00000027260) #13 ALG3 (ENSCPOG00000019613) #14 ECE2 (ENSCPOG00000013082) #16 PSMD2 (ENSCPOG00000009183) #17 EIF4G1 (ENSCPOG00000007336) #18 FAM131A (ENSCPOG00000031188) #20 CLCN2 (ENSCPOG00000009200) #21 POLR2H (ENSCPOG00000040303) #22 ENSCPOG00000030572 #23 CHRD (ENSCPOG00000007354) #24 EPHB3 (ENSCPOG00000000977) #25 VPS8 (ENSCPOG00000010486) #26 C3orf70 (ENSCPOG00000001519) #27 ENSCPOG00000040809 #28 ENSCPOG00000007398 #28 MAP3K13 (ENSCPOG00000014720) #29 TMEM41A (ENSCPOG00000036340) #30 LIPH (ENSCPOG00000013818) #31 SENP2 (ENSCPOG00000025946) #32 IGF2BP2 (ENSCPOG00000005471) #33 TRA2B (ENSCPOG00000006313) #34 ETV5 (ENSCPOG00000010094) #35 DGKG (ENSCPOG00000010104) #36 Naked mole-rat female MODERN SPECIES 27 HTR3E (ENSHGLG00000040578) EIF2B5 (ENSHGLG00000017325) #9 ENSHGLG00000041686 ##10 DVL3 (ENSHGLG00000017314) #10 AP2M1 (ENSHGLG00000016752) #11 ABCF3 (ENSHGLG00000016746) #12 VWA5B2 (ENSHGLG00000016728) #13 ALG3 (ENSHGLG00000016704) #14 EEF1AKMT4 (ENSHGLG00000045913) CAMK2N2 (ENSHGLG00000044517) #15 ECE2 (ENSHGLG00000014845) #16 PSMD2 (ENSHGLG00000014466) #17 ENSHGLG00000013899 #18 FAM131A (ENSHGLG00000013050) #20 CLCN2 (ENSHGLG00000012758) #21 POLR2H (ENSHGLG00000048890) #22 THPO (ENSHGLG00000043140) #23 ENSHGLG00000012005 #24 ENSHGLG00000032546 #24 ENSHGLG00000041027 #24 ENSHGLG00000048985 ENSHGLG00000043750 ENSHGLG00000050729 ENSHGLG00000020960 ENSHGLG00000011167 #25 VPS8 (ENSHGLG00000016688) #26 C3orf70 (ENSHGLG00000048928) #27 ENSHGLG00000016485 EHHADH (ENSHGLG00000038703) #28 MAP3K13 (ENSHGLG00000017309) #29 ENSHGLG00000019199 Sciuridae ANCESTRAL SPECIES 12 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00940000163736 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516 #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00950000183009 #34 ENSGT00940000163340 Eurasian red squirrel MODERN SPECIES 1 ABCC5 (ENSSVLG00005004668) #8 ENSSVLG00005004623 EIF2B5 (ENSSVLG00005004601) #9 DVL3 (ENSSVLG00005004544) #10 AP2M1 (ENSSVLG00005015912) #11 ABCF3 (ENSSVLG00005015804) #12 VWA5B2 (ENSSVLG00005015467) #13 ALG3 (ENSSVLG00005015409) #14 EEF1AKMT4 (ENSSVLG00005015366) CAMK2N2 (ENSSVLG00005015328) #15 ECE2 (ENSSVLG00005014218) #16 PSMD2 (ENSSVLG00005013466) #17 EIF4G1 (ENSSVLG00005012942) #18 FAM131A (ENSSVLG00005012712) #20 CLCN2 (ENSSVLG00005012577) #21 POLR2H (ENSSVLG00005012448) #22 THPO (ENSSVLG00005012371) #23 CHRD (ENSSVLG00005012258) #24 ENSSVLG00005012180 ENSSVLG00005012152 ##25 ENSSVLG00005012108 #25 ENSSVLG00005012020 VPS8 (ENSSVLG00005011854) #26 C3orf70 (ENSSVLG00005011786) #27 EHHADH (ENSSVLG00005011738) #28 ENSSVLG00005011717 MAP3K13 (ENSSVLG00005011382) #29 ENSSVLG00005011241 #30 LIPH (ENSSVLG00005011034) #31 SENP2 (ENSSVLG00005010952) #32 ENSSVLG00005010910 Marmotini ANCESTRAL SPECIES 57 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00940000163736 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00940000157516.q.b #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00940000153710.a.l ENSGT00950000183009 #34 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 24 TSSK6 (ENSMMMG00000003603) NDUFA13 (ENSMMMG00000003609) YJEFN3 (ENSMMMG00000003614) CILP2 (ENSMMMG00000003635) PBX4 (ENSMMMG00000003652) ENSMMMG00000003669 LPAR2 (ENSMMMG00000003676) GMIP (ENSMMMG00000003685) ATP13A1 (ENSMMMG00000003751) ENSMMMG00000003843 ENSMMMG00000003852 ENSMMMG00000003860 ENSMMMG00000003867 ENSMMMG00000003887 CAMP (ENSMMMG00000003889) ENSMMMG00000003899 #22 ENSMMMG00000003905 CDC25A (ENSMMMG00000003916) ENSMMMG00000004321 ENSMMMG00000004336 ENSMMMG00000004343 ENSMMMG00000004367 DHX30 (ENSMMMG00000004544) SMARCC1 (ENSMMMG00000005131) CSPG5 (ENSMMMG00000005719) ELP6 (ENSMMMG00000005727) SCAP (ENSMMMG00000005743) ENSMMMG00000005771 ENSMMMG00000006140 KLHL18 (ENSMMMG00000006141) KIF9 (ENSMMMG00000006191) Alpin marmot MODERN SPECIES 65 ENSMMMG00000006241 ENSMMMG00000006246 ABCC5 (ENSMMMG00000006275) #8 EIF2B5 (ENSMMMG00000006358) #9 DVL3 (ENSMMMG00000006390) #10 AP2M1 (ENSMMMG00000006465) #11 ABCF3 (ENSMMMG00000006539) #12 VWA5B2 (ENSMMMG00000006578) #13 ALG3 (ENSMMMG00000006608) #14 EEF1AKMT4 (ENSMMMG00000006671) ECE2 (ENSMMMG00000006677) #16 PSMD2 (ENSMMMG00000006803) #17 EIF4G1 (ENSMMMG00000006821) #18 FAM131A (ENSMMMG00000007631) #20 CLCN2 (ENSMMMG00000007660) #21 POLR2H (ENSMMMG00000007825) #22 THPO (ENSMMMG00000007840) #23 CHRD (ENSMMMG00000007845) #24 ENSMMMG00000007976 ENSMMMG00000007979 EPHB3 (ENSMMMG00000007987) #25 MAGEF1 (ENSMMMG00000008030) VPS8 (ENSMMMG00000008041) #26 ENSMMMG00000008532 #28 ENSMMMG00000008550 #28 MAP3K13 (ENSMMMG00000008557) #29 TMEM41A (ENSMMMG00000008592) #30 LIPH (ENSMMMG00000008606) #31 SENP2 (ENSMMMG00000008647) #32 IGF2BP2 (ENSMMMG00000008674) #33 ENSMMMG00000008702 Marmotini_b ANCESTRAL SPECIES 79 ENSGT00940000163497 ENSGT00940000155470.b #8 ENSGT00510000047568 #9 ENSGT00950000182903.a.a #10 ENSGT00940000159223 #11 ENSGT00940000155604 #12 ENSGT00940000157096 #13 ENSGT00390000013904 #14 ENSGT00940000164140 ENSGT00390000004940.a.a #15 ENSGT00940000156921 #16 ENSGT00940000153386.B #17 ENSGT00940000154648.a.a #18 ENSGT00950000183106.a.a.b #20 ENSGT00940000155439 #21 ENSGT00390000018195 #22 ENSGT00390000006294 #23 ENSGT00940000161767 #24 ENSGT00940000164132 ENSGT00940000158024.C #25 ENSGT00940000163736 ENSGT00390000010672 #26 ENSGT00390000006618 #27 ENSGT00910000148595 ENSGT00940000157516.q.a #28 ENSGT00940000158216 #29 ENSGT00940000162528 #30 ENSGT00940000156285 #31 ENSGT00940000154951 #32 ENSGT00940000154913 #33 ENSGT00940000153710.a.l Squirrel MODERN SPECIES 178 PARL (ENSSTOG00000023222) #7 ENSSTOG00000019669 ABCC5 (ENSSTOG00000003886) #8 EIF2B5 (ENSSTOG00000021575) #9 DVL3 (ENSSTOG00000008239) #10 AP2M1 (ENSSTOG00000008273) #11 ABCF3 (ENSSTOG00000008295) #12 VWA5B2 (ENSSTOG00000008179) #13 ALG3 (ENSSTOG00000028571) #14 CAMK2N2 (ENSSTOG00000023761) #15 ECE2 (ENSSTOG00000008215) #16 PSMD2 (ENSSTOG00000008234) #17 EIF4G1 (ENSSTOG00000021912) #18 FAM131A (ENSSTOG00000021429) #20 CLCN2 (ENSSTOG00000008267) #21 POLR2H (ENSSTOG00000008300) #22 THPO (ENSSTOG00000008312) #23 CHRD (ENSSTOG00000008321) #24 EPHB3 (ENSSTOG00000009427) #25 MAGEF1 (ENSSTOG00000014789) VPS8 (ENSSTOG00000022395) #26 C3orf70 (ENSSTOG00000006003) #27 ENSSTOG00000032120 EHHADH (ENSSTOG00000027701) #28 MAP3K13 (ENSSTOG00000001986) #29 TMEM41A (ENSSTOG00000001995) #30 LIPH (ENSSTOG00000011247) #31 SENP2 (ENSSTOG00000011258) #32 ENSSTOG00000033088 IGF2BP2 (ENSSTOG00000022077) #33 ENSSTOG00000033354 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 73 TM6SF2 (ENSUPAG00010018116) SUGP1 (ENSUPAG00010018104) MAU2 (ENSUPAG00010018075) GATAD2A (ENSUPAG00010018036) TSSK6 (ENSUPAG00010018027) YJEFN3 (ENSUPAG00010018017) CILP2 (ENSUPAG00010018008) PBX4 (ENSUPAG00010017995) LPAR2 (ENSUPAG00010017989) GMIP (ENSUPAG00010017934) ATP13A1 (ENSUPAG00010017873) ENSUPAG00010017861 ENSUPAG00010017854 ENSUPAG00010017852 CAMP (ENSUPAG00010017843) ENSUPAG00010017839 #22 CDC25A (ENSUPAG00010017812) ENSUPAG00010017794 ENSUPAG00010017787 ENSUPAG00010017306 DHX30 (ENSUPAG00010017216) ENSUPAG00010017204 SMARCC1 (ENSUPAG00010017138) CSPG5 (ENSUPAG00010017126) ELP6 (ENSUPAG00010017114) SCAP (ENSUPAG00010017105) PTPN23 (ENSUPAG00010017097) ENSUPAG00010017093 KLHL18 (ENSUPAG00010017081) KIF9 (ENSUPAG00010017029) ENSUPAG00010017013 Arctic ground squirrel MODERN SPECIES 67 ENSUPAG00010003684 ABCC5 (ENSUPAG00010003605) #8 EIF2B5 (ENSUPAG00010003579) #9 DVL3 (ENSUPAG00010003477) #10 ENSUPAG00010003469 ABCF3 (ENSUPAG00010003427) #12 VWA5B2 (ENSUPAG00010003400) #13 ALG3 (ENSUPAG00010003339) #14 EEF1AKMT4 (ENSUPAG00010003328) CAMK2N2 (ENSUPAG00010003323) #15 ECE2 (ENSUPAG00010003253) #16 PSMD2 (ENSUPAG00010003228) #17 EIF4G1 (ENSUPAG00010002903) #18 FAM131A (ENSUPAG00010002887) #20 CLCN2 (ENSUPAG00010002755) #21 POLR2H (ENSUPAG00010002737) #22 THPO (ENSUPAG00010002733) #23 CHRD (ENSUPAG00010002655) #24 ENSUPAG00010002644 EPHB3 (ENSUPAG00010002608) #25 MAGEF1 (ENSUPAG00010002606) VPS8 (ENSUPAG00010002273) #26 C3orf70 (ENSUPAG00010002260) #27 ENSUPAG00010002254 ENSUPAG00010002246 #28 ENSUPAG00010002245 MAP3K13 (ENSUPAG00010002192) #29 TMEM41A (ENSUPAG00010002185) #30 LIPH (ENSUPAG00010002143) #31 SENP2 (ENSUPAG00010002084) #32 ENSUPAG00010002075