Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b Ovalentaria ANCESTRAL SPECIES 16 ENSGT00390000013484 ENSGT00520000055626.a ENSGT00940000153212 ENSGT00940000155803 ENSGT00390000008196 ENSGT00390000014471 ENSGT00940000157979 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00390000013484 ENSGT00520000055626.a ENSGT00940000153212 ENSGT00940000155803 ENSGT00390000008196 ENSGT00390000014471 ENSGT00940000157979 ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b Cyprinodontiformes ANCESTRAL SPECIES 27 ENSGT00510000050587 ENSGT00390000013484 ENSGT00520000055626.a ENSGT00940000153212 ENSGT00940000155803 ENSGT00390000008196 ENSGT00390000014471 ENSGT00530000063749.c.b ENSGT00940000157979 ENSGT00940000159623 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00510000047669 #22 ENSGT00530000066485 #21 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a ENSGT00940000156466 ENSGT01030000234908 ENSGT00510000049239.b.a ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00530000063156.a.a.a ENSGT00440000038585.c ENSGT00940000157207.a.a Cyprinodontoidei ANCESTRAL SPECIES 33 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000164178 ENSGT00940000155803 ENSGT00390000008196 ENSGT00390000014471 ENSGT00530000063749.c.b ENSGT00940000157979 ENSGT00940000159623 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00510000047669 #22 ENSGT00530000066485 #21 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.b.a ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00500000044904.a.b.e.a.l.d.a.a.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.a ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a Poeciliinae ANCESTRAL SPECIES 12 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000164178 ENSGT00940000155803 ENSGT00390000008196 ENSGT00390000014471 ENSGT00530000063749.c.b ENSGT00940000157979 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00390000010145.d #20 ENSGT00510000047669 #22 ENSGT00530000066485 #21 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00500000044904.a.b.e.a.l.c ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b.z ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00500000044904.a.b.e.a.l.d.a.a.a.b ENSGT00500000044904.a.b.e.a.l.d.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.a ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a ENSGT00500000044904.a.b.e.a.l.d.b.b.b Poecilia ANCESTRAL SPECIES 88 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000164178 ENSGT00940000155803 ENSGT00390000008196 ENSGT00390000014471 ENSGT00530000063749.c.b ENSGT00940000157979 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00390000010145.d #20 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 NAME_6 ANCESTRAL SPECIES 380 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00390000010145.d #20 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 Amazon molly MODERN SPECIES 957 noxo1b (ENSPFOG00000002455) GID4 (ENSPFOG00000002406) atpaf2 (ENSPFOG00000002339) tom1l2 (ENSPFOG00000002332) foxl3 (ENSPFOG00000002311) slc25a46 (ENSPFOG00000002217) #17 wdr36 (ENSPFOG00000001899) #18 ENSPFOG00000023751 #19 ENSPFOG00000001767 #20 ENSPFOG00000001746 #22 ugcg (ENSPFOG00000001672) #23 PTBP3 (ENSPFOG00000001463) #24 hsdl2 (ENSPFOG00000001290) #25 Sailfin molly MODERN SPECIES 2349 ENSPLAG00000002629 ENSPLAG00000002635 #21 ENSPLAG00000002646 #22 ugcg (ENSPLAG00000002657) #23 PTBP3 (ENSPLAG00000002689) #24 hsdl2 (ENSPLAG00000002714) #25 Guppy MODERN SPECIES 18 ENSPREG00000016902 ENSPREG00000016935 rhoab (ENSPREG00000016947) ythdc1 (ENSPREG00000016973) fktn (ENSPREG00000017031) UFC1 (ENSPREG00000017049) apc (ENSPREG00000017065) ENSPREG00000017084 atp6v1g1 (ENSPREG00000017098) slc31a1 (ENSPREG00000017115) slc25a46 (ENSPREG00000017128) #17 wdr36 (ENSPREG00000017144) #18 ENSPREG00000017167 #19 ENSPREG00000017191 #19 ENSPREG00000017211 #20 ENSPREG00000017232 #22 ugcg (ENSPREG00000017249) #23 PTBP3 (ENSPREG00000017280) #24 hsdl2 (ENSPREG00000017355) #25 Platyfish MODERN SPECIES 22 ENSXMAG00000027130 cdc26 (ENSXMAG00000007664) ENSXMAG00000029466 prpf4 (ENSXMAG00000002750) ENSXMAG00000002756 ythdc1 (ENSXMAG00000005196) fktn (ENSXMAG00000029172) ENSXMAG00000024199 ENSXMAG00000005142 atp6v1g1 (ENSXMAG00000027993) ENSXMAG00000005136 slc25a46 (ENSXMAG00000005123) #17 wdr36 (ENSXMAG00000005092) #18 ENSXMAG00000005062 #19 ENSXMAG00000005058 #20 ENSXMAG00000024805 #22 ENSXMAG00000025129 #21 ugcg (ENSXMAG00000005041) #23 PTBP3 (ENSXMAG00000025830) #24 hsdl2 (ENSXMAG00000004987) #25 ENSXMAG00000029560 capslb (ENSXMAG00000013556) ENSXMAG00000028143 ENSXMAG00000027571 ENSXMAG00000024704 ENSXMAG00000006116 lmbrd2b (ENSXMAG00000001349) ppp1r3b (ENSXMAG00000024801) ENSXMAG00000025958 ENSXMAG00000019780 ENSXMAG00000021293 NAME_4 ANCESTRAL SPECIES 93 ENSGT00940000156006.k ENSGT00940000156006.l ENSGT00940000164178 ENSGT00940000155803 ENSGT00390000008196 ENSGT00390000014471 ENSGT00530000063749.c.b ENSGT00940000157979 ENSGT00940000159623 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.b.a ENSGT00940000156466 ENSGT00510000049239.b.a ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00500000044904.a.b.e.a.l.d.a.a.a.b ENSGT00500000044904.a.b.e.a.l.d.b.b.a ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a ENSGT00500000044904.a.b.e.a.l.d.b.b.b Mummichog MODERN SPECIES 271 apc (ENSFHEG00000005692) ENSFHEG00000005727 ENSFHEG00000005864 ENSFHEG00000005888 atp6v1g1 (ENSFHEG00000005906) slc31a1 (ENSFHEG00000005918) slc25a46 (ENSFHEG00000005967) #17 wdr36 (ENSFHEG00000006019) #18 ENSFHEG00000006029 ##19 ENSFHEG00000006075 #19 ENSFHEG00000006081 #22 ENSFHEG00000006088 ugcg (ENSFHEG00000006140) #23 PTBP3 (ENSFHEG00000006219) #24 hsdl2 (ENSFHEG00000006273) #25 ENSFHEG00000006289 capslb (ENSFHEG00000006310) ENSFHEG00000006321 ENSFHEG00000006336 ENSFHEG00000006347 lmbrd2b (ENSFHEG00000006374) ppp1r3b (ENSFHEG00000006380) ENSFHEG00000006385 ENSFHEG00000006403 ENSFHEG00000006408 ENSFHEG00000006411 Sheepshead minnow MODERN SPECIES 853 slc31a1 (ENSCVAG00000022753) atp6v1g1 (ENSCVAG00000022737) ENSCVAG00000022726 ENSCVAG00000022706 ENSCVAG00000022632 apc (ENSCVAG00000022390) ENSCVAG00000022378 fktn (ENSCVAG00000022368) ufc1 (ENSCVAG00000022360) ythdc1 (ENSCVAG00000022349) ENSCVAG00000022334 ENSCVAG00000022313 cdc26 (ENSCVAG00000022301) ENSCVAG00000022297 #20 ENSCVAG00000022284 #21 ENSCVAG00000022278 #22 ugcg (ENSCVAG00000022269) #23 ENSCVAG00000022258 #24 Aplocheiloidei ANCESTRAL SPECIES 205 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00510000047669 #22 ENSGT00530000066485 #21 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000156466 ENSGT00510000049239.b.a ENSGT00940000155402.a.b.y ENSGT00390000018651.a ENSGT00940000159475.c Mangrove rivulus MODERN SPECIES 921 ENSKMAG00000008388 #21 ENSKMAG00000008376 #22 ugcg (ENSKMAG00000008331) #23 PTBP3 (ENSKMAG00000008254) #24 hsdl2 (ENSKMAG00000008177) #25 Turquoise killifish MODERN SPECIES 1611 prpf4 (ENSNFUG00015019269) CDC26 (ENSNFUG00015019295) ENSNFUG00015019312 ENSNFUG00015020226 ENSNFUG00015000164 pisd (ENSNFUG00015000181) PRR14L (ENSNFUG00015000236) ythdc1 (ENSNFUG00015000323) ufc1 (ENSNFUG00015000466) FKTN (ENSNFUG00015000481) slc31a1 (ENSNFUG00015000519) ATP6V1G1 (ENSNFUG00015000529) slc25a46 (ENSNFUG00015000558) #17 ENSNFUG00015000623 ENSNFUG00015000720 #19 MOCS2 (ENSNFUG00015000906) #22 ENSNFUG00015000911 #21 UGCG (ENSNFUG00015000920) #23 PTBP3 (ENSNFUG00015000995) #24 HSDL2 (ENSNFUG00015001247) #25 capslb (ENSNFUG00015001281) ENSNFUG00015001290 LMBRD2B (ENSNFUG00015001319) ppp1r3b (ENSNFUG00015001421) uap1l1 (ENSNFUG00015001551) slc25a25b (ENSNFUG00015001611) ENSNFUG00015001728 SMARCB1 (ENSNFUG00015001731) derl2 (ENSNFUG00015001746) setb (ENSNFUG00015001763) ENSNFUG00015001770 Oryzias ANCESTRAL SPECIES 9 ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT01090000260978 ENSGT00940000155402.a.b ENSGT01030000234908 ENSGT00940000156466 ENSGT00940000155147 ENSGT00940000154399 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT00940000156729 #25 ENSGT00530000063749.c.b ENSGT00940000157979 ENSGT00390000014471 ENSGT00390000008196 ENSGT00940000155803 ENSGT00940000153212 ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000156006 ENSGT00390000008457 ENSGT00940000154997 ENSGT00940000176948 Oryzias_b ANCESTRAL SPECIES 4 ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT01090000260978 ENSGT00940000155402.a.b ENSGT01030000234908 ENSGT00940000156466 ENSGT00940000155147 ENSGT00940000154399 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT00940000156729 #25 ENSGT00940000157979.i ENSGT00390000014471 ENSGT00390000008196 ENSGT00940000155803 ENSGT00940000153212 ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 Indian medaka MODERN SPECIES 30 rpl17 (ENSOMEG00000005081) MFHAS1 (ENSOMEG00000005094) lmbrd2b (ENSOMEG00000005113) ppp1r3b (ENSOMEG00000005119) ENSOMEG00000005130 myo5b (ENSOMEG00000005222) ENSOMEG00000005239 capslb (ENSOMEG00000005269) ENSOMEG00000005253 slc31a1 (ENSOMEG00000005286) atp6v1g1 (ENSOMEG00000005297) slc25a46 (ENSOMEG00000005317) #17 wdr36 (ENSOMEG00000005342) #18 ENSOMEG00000005366 #19 ENSOMEG00000005378 #21 ENSOMEG00000005407 #22 ugcg (ENSOMEG00000005427) #23 ENSOMEG00000005434 hsdl2 (ENSOMEG00000005445) #25 Javanese ricefish MODERN SPECIES 3 abraxas1 (ENSOJAG00000015086) nkx6.1 (ENSOJAG00000015395) rpl17 (ENSOJAG00000015430) MFHAS1 (ENSOJAG00000015475) ppp1r3b (ENSOJAG00000015591) ENSOJAG00000015608 myo5b (ENSOJAG00000015623) ENSOJAG00000015658 capslb (ENSOJAG00000015672) slc31a1 (ENSOJAG00000015685) atp6v1g1 (ENSOJAG00000015700) slc25a46 (ENSOJAG00000015735) #17 wdr36 (ENSOJAG00000015764) #18 ENSOJAG00000015884 #19 ENSOJAG00000015976 #21 MOCS2 (ENSOJAG00000015998) #22 ugcg (ENSOJAG00000016010) #23 hsdl2 (ENSOJAG00000016016) #25 ENSOJAG00000016069 fktn (ENSOJAG00000016113) ufc1 (ENSOJAG00000016239) ythdc1 (ENSOJAG00000016252) ENSOJAG00000016386 ENSOJAG00000016394 PISD (ENSOJAG00000005944) rnf224 (ENSOJAG00000005965) ENSOJAG00000005981 FER (ENSOJAG00000005999) ENSOJAG00000006128 cdc26 (ENSOJAG00000006147) prpf4 (ENSOJAG00000006163) Oryzias_a ANCESTRAL SPECIES 12 ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT01090000260978 ENSGT00940000155402.a.b ENSGT01030000234908 ENSGT00940000156466 ENSGT00940000155147 ENSGT00940000154399 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT00940000156729 #25 ENSGT00530000063749.c.b ENSGT00940000157979 ENSGT00390000014471 ENSGT00390000008196 ENSGT00940000155803 ENSGT00940000153212 ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000156006 ENSGT00390000008457 ENSGT00940000154997 Chinese medaka MODERN SPECIES 4441 ENSOSIG00000001877 #21 ENSOSIG00000001943 #22 ugcg (ENSOSIG00000001772) #23 Japanese Medaka HdrR MODERN SPECIES 3 MFHAS1 (ENSORLG00000022182) lmbrd2b (ENSORLG00000022269) ppp1r3b (ENSORLG00000020468) ENSORLG00000028036 myo5b (ENSORLG00000028096) myo5b (ENSORLG00000018326) ENSORLG00000022007 capslb (ENSORLG00000028878) slc31a1 (ENSORLG00000019615) atp6v1g1 (ENSORLG00000024931) slc25a46 (ENSORLG00000019508) #17 wdr36 (ENSORLG00000019652) #18 ENSORLG00000024245 ENSORLG00000022307 #19 ENSORLG00000028512 #21 ENSORLG00000021790 #22 ugcg (ENSORLG00000019665) #23 hsdl2 (ENSORLG00000019682) #25 ENSORLG00000023448 ENSORLG00000024187 apc (ENSORLG00000022655) ENSORLG00000016109 fktn (ENSORLG00000018736) ufc1 (ENSORLG00000027422) ythdc1 (ENSORLG00000030544) ENSORLG00000019608 pisd (ENSORLG00000019626) rnf224 (ENSORLG00000025165) ENSORLG00000029568 prpf4 (ENSORLG00000019641) ENSORLG00000022772 Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT01030000234908 ENSGT00940000156466 ENSGT00500000044904.a.b.e.a.k.a ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a Cichlidae ANCESTRAL SPECIES 75 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00500000044904.a.b.e.a.k.a.a.b.b.a ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT01030000234908 ENSGT00940000156466 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a.b Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00500000044904.a.b.e.a.k.a.a.a.b ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT00510000049239.b.a ENSGT00940000156466 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.b ENSGT01030000234638.b.b.d #19 ENSGT00940000153662.B #18 ENSGT00390000010145.d.e.a.a.a #20 ENSGT00390000015874 #17 ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00500000044904.a.b.e.a.k.a.a.a.b ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT01030000234908 ENSGT00940000156466 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a.a ENSGT01030000234638.b.b.d #19 ENSGT00940000153662.B #18 ENSGT00500000044904.a.b.e.a.k.b.a.a ENSGT00390000010145.d.f #20 ENSGT00390000010145.d.e.a.b #20 ENSGT00390000010145.d.e.a.a.a #20 ENSGT00390000015874 #17 ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 Haplochromini ANCESTRAL SPECIES ENSGT00940000158928 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.a.b ENSGT00940000163299.B.b.b.h.c.b.t.b.a ENSGT00940000155987.b ENSGT00940000163299.B.b.b.h.c.b.s.a.b ENSGT00500000044904.a.b.e.a.k.a.a.a.a.a ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00500000044904.a.b.e.a.k.a.a.a.b ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT00510000049239.b.a ENSGT00940000156466 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a.b ENSGT01030000234638.b.b.d #19 ENSGT00940000153662.B #18 ENSGT00390000010145.d.f #20 ENSGT00390000010145.d.e.a.b.a #20 ENSGT00390000010145.d.e.a.a.a #20 ENSGT00390000015874 #17 ENSGT00990000204763 ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 Burton s mouthbrooder MODERN SPECIES 821 ENSHBUG00000023735 ENSHBUG00000023729 ppp1r3b (ENSHBUG00000023724) lmbrd2b (ENSHBUG00000023702) ENSHBUG00000023603 ENSHBUG00000023597 myo5b (ENSHBUG00000001037) ENSHBUG00000023454 capslb (ENSHBUG00000023435) ENSHBUG00000023410 #21 ENSHBUG00000023418 #22 ugcg (ENSHBUG00000023398) #23 PTBP3 (ENSHBUG00000023357) #24 hsdl2 (ENSHBUG00000023288) #25 ENSHBUG00000023236 Haplochromini_A ANCESTRAL SPECIES 1 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.a.b.b ENSGT00940000163299.B.b.b.h.c.b.t.b.a ENSGT00940000155987.b ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00500000044904.a.b.e.a.k.a.a.a.b ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b ENSGT00940000162139 ENSGT00500000044904.a.b.e.a.k.a.a.a.a.a ENSGT00940000163299.B.b.b.h.c.b.s.a.b ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT00510000049239.b.a ENSGT00940000156466 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a.b ENSGT01030000234638.b.b.d #19 ENSGT00940000153662.B #18 ENSGT00390000010145.d.f #20 ENSGT00390000010145.d.e.a.b.a #20 ENSGT00390000010145.d.e.a.a.a #20 ENSGT00390000015874.q.a #17 Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00940000155987.b.h.a ENSGT01000000214408.a.b.a.a.a.c.a.b.e.a.a.b ENSGT00940000163299.B.b.b.h.c.b.t.a ENSGT00940000163299.B.b.b.h.c.b.s.a.b ENSGT00500000044904.a.b.e.a.k.a.a.a.a.a ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00500000044904.a.b.e.a.k.a.a.a.b ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b ENSGT00940000162139 ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT00510000049239.b.a ENSGT00940000156466 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a.b ENSGT00390000002634.a.f.b.a.a.b ENSGT01030000234638.b.b.d #19 ENSGT00940000153662.B #18 ENSGT00390000010145.d.e.a.a.b #20 ENSGT00390000010145.d.f #20 ENSGT00390000010145.d.e.a.b.a #20 ENSGT00390000010145.d.e.a.a.a.a.a #20 ENSGT00390000015874.q.b #17 ENSGT00390000015874.r #17 ENSGT00990000204763 ENSGT00940000156114.c Eastern happy MODERN SPECIES 19 ENSACLG00000009555 ENSACLG00000009552 ENSACLG00000009348 ENSACLG00000009340 ENSACLG00000009333 ENSACLG00000009330 ppp1r3b (ENSACLG00000009327) lmbrd2b (ENSACLG00000009265) ENSACLG00000009261 ENSACLG00000009241 ENSACLG00000009218 myo5b (ENSACLG00000008924) ENSACLG00000008915 capslb (ENSACLG00000008905) ENSACLG00000008897 #21 ENSACLG00000008891 #22 ENSACLG00000008887 ugcg (ENSACLG00000008870) #23 PTBP3 (ENSACLG00000008827) #24 hsdl2 (ENSACLG00000008816) #25 ENSACLG00000008810 ENSACLG00000008806 ENSACLG00000008788 ENSACLG00000007667 ENSACLG00000007646 #19 wdr36 (ENSACLG00000007577) #18 ENSACLG00000007559 #20 ENSACLG00000007546 #20 ENSACLG00000007537 #20 ENSACLG00000007533 #20 slc25a46 (ENSACLG00000007129) #17 Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005023298 ENSMZEG00005023303 ENSMZEG00005023305 ENSMZEG00005023307 ENSMZEG00005023309 ppp1r3b (ENSMZEG00005023310) lmbrd2b (ENSMZEG00005023312) ENSMZEG00005023315 ENSMZEG00005023316 ENSMZEG00005023317 ENSMZEG00005023319 myo5b (ENSMZEG00005023325) ENSMZEG00005023332 capslb (ENSMZEG00005023333) ENSMZEG00005023334 #21 ENSMZEG00005023336 #22 ugcg (ENSMZEG00005023337) #23 ENSMZEG00005023338 PTBP3 (ENSMZEG00005023339) #24 hsdl2 (ENSMZEG00005023344) #25 ENSMZEG00005023346 ENSMZEG00005023349 ENSMZEG00005023355 #19 wdr36 (ENSMZEG00005023368) #18 ENSMZEG00005000060 ENSMZEG00005000083 dcc (ENSMZEG00005000105) tdgf1 (ENSMZEG00005000291) ENSMZEG00005000304 ENSMZEG00005000306 ENSMZEG00005000312 P. nyererei MODERN SPECIES 516 nkx6.1 (ENSPNYG00000010705) rpl17 (ENSPNYG00000010723) MFHAS1 (ENSPNYG00000010802) ENSPNYG00000010827 ENSPNYG00000010872 ppp1r3b (ENSPNYG00000010876) lmbrd2b (ENSPNYG00000010898) ENSPNYG00000010929 ENSPNYG00000010958 ENSPNYG00000010978 ENSPNYG00000011023 myo5b (ENSPNYG00000011105) ENSPNYG00000011203 capslb (ENSPNYG00000011222) ENSPNYG00000011244 #21 ENSPNYG00000011250 #22 ugcg (ENSPNYG00000011264) #23 PTBP3 (ENSPNYG00000011391) #24 hsdl2 (ENSPNYG00000011578) #25 ENSPNYG00000011619 #19 wdr36 (ENSPNYG00000011708) #18 Lyretail cichlid MODERN SPECIES 293 ENSNBRG00000005974 ENSNBRG00000005956 ENSNBRG00000005930 ENSNBRG00000005917 ppp1r3b (ENSNBRG00000005909) lmbrd2b (ENSNBRG00000005856) ENSNBRG00000005828 ENSNBRG00000005816 ENSNBRG00000005797 ENSNBRG00000005776 ENSNBRG00000005743 myo5b (ENSNBRG00000005626) ENSNBRG00000005563 capslb (ENSNBRG00000005538) ENSNBRG00000005530 #21 ENSNBRG00000005518 #22 ugcg (ENSNBRG00000005486) #23 PTBP3 (ENSNBRG00000005450) #24 hsdl2 (ENSNBRG00000005414) #25 ENSNBRG00000005356 ENSNBRG00000005298 #19 wdr36 (ENSNBRG00000005131) #18 ENSNBRG00000005118 ENSNBRG00000005113 ENSNBRG00000005092 #20 ENSNBRG00000005062 #20 ENSNBRG00000005049 #20 slc25a46 (ENSNBRG00000005024) #17 smyd1a (ENSNBRG00000004984) DQX1 (ENSNBRG00000004923) thnsl2 (ENSNBRG00000004851) Nile tilapia MODERN SPECIES 19 ENSONIG00000037704 ENSONIG00000042556 ENSONIG00000019940 ENSONIG00000009129 ENSONIG00000041320 ENSONIG00000042120 ENSONIG00000041711 ENSONIG00000029886 ENSONIG00000043086 ENSONIG00000034278 ENSONIG00000037826 ENSONIG00000019933 ENSONIG00000035125 ENSONIG00000003902 ENSONIG00000012528 #21 ENSONIG00000041729 #22 ugcg (ENSONIG00000012530) #23 PTBP3 (ENSONIG00000012535) #24 hsdl2 (ENSONIG00000012539) #25 ENSONIG00000039478 ENSONIG00000028172 ENSONIG00000041969 ENSONIG00000012547 ENSONIG00000012549 #19 wdr36 (ENSONIG00000012551) #18 ENSONIG00000033350 ENSONIG00000012560 #20 ENSONIG00000012561 ENSONIG00000012562 ENSONIG00000027369 ENSONIG00000012563 Midas cichlid MODERN SPECIES 1193 zgc:113176 (ENSACIG00000016552) ENSACIG00000016588 myo5b (ENSACIG00000016623) ENSACIG00000016701 capslb (ENSACIG00000016722) ENSACIG00000016734 #21 ENSACIG00000016754 #22 ugcg (ENSACIG00000016761) #23 PTBP3 (ENSACIG00000016799) #24 hsdl2 (ENSACIG00000016827) #25 Pomacentridae ANCESTRAL SPECIES 84 ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00940000159623 ENSGT00940000157979 ENSGT00530000063749.c.b ENSGT00390000014471 ENSGT00390000008196 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 Pomacentridae_A ANCESTRAL SPECIES 81 ENSGT00940000157350.j ENSGT00940000157350.i ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00940000159623 ENSGT00940000157979 ENSGT00530000063749.c.b ENSGT00390000014471 ENSGT00390000008196 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 Amphiprion ANCESTRAL SPECIES 250 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00940000159623 ENSGT00940000157979 ENSGT00530000063749.c.b ENSGT00390000014471 ENSGT00390000008196 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 987 ENSAOCG00000013076 #21 ENSAOCG00000013062 #22 ugcg (ENSAOCG00000013044) #23 PTBP3 (ENSAOCG00000012991) #24 hsdl2 (ENSAOCG00000012966) #25 Clown anemonefish MODERN SPECIES 890 MFHAS1 (ENSAOCG00000000955) ENSAOCG00000014548 ppp1r3b (ENSAOCG00000014570) ENSAOCG00000014589 ENSAOCG00000014607 ENSAOCG00000014633 UFC1 (ENSAOCG00000014647) fktn (ENSAOCG00000014664) ENSAOCG00000014679 #21 ENSAOCG00000014689 #22 Orange clownfish MODERN SPECIES 7 gpat3 (ENSAPEG00000023036) abraxas1 (ENSAPEG00000023045) ENSAPEG00000023053 mrps18c (ENSAPEG00000023068) HELQ (ENSAPEG00000023153) MYL5 (ENSAPEG00000023657) rpl17 (ENSAPEG00000024012) MFHAS1 (ENSAPEG00000024047) ppp1r3b (ENSAPEG00000024052) ENSAPEG00000024060 ENSAPEG00000024073 ENSAPEG00000024109 fktn (ENSAPEG00000024117) UFC1 (ENSAPEG00000024125) ENSAPEG00000024130 #21 ENSAPEG00000024134 #22 ENSAPEG00000024137 ugcg (ENSAPEG00000024140) #23 PTBP3 (ENSAPEG00000024155) #24 hsdl2 (ENSAPEG00000024172) #25 ENSAPEG00000024188 atp6v1g1 (ENSAPEG00000024195) lmbrd2b (ENSAPEG00000024203) ENSAPEG00000024225 myo5b (ENSAPEG00000024238) ENSAPEG00000024263 capslb (ENSAPEG00000024274) slc31a1 (ENSAPEG00000024285) ENSAPEG00000024291 slc25a46 (ENSAPEG00000024298) #17 wdr36 (ENSAPEG00000000335) #18 Spiny chromis MODERN SPECIES 1634 MFHAS1 (ENSAPOG00000016763) ppp1r3b (ENSAPOG00000016777) ENSAPOG00000016802 ENSAPOG00000017020 ENSAPOG00000017073 UFC1 (ENSAPOG00000017091) fktn (ENSAPOG00000017101) ENSAPOG00000017109 #21 ENSAPOG00000017118 #22 ugcg (ENSAPOG00000017179) #23 PTBP3 (ENSAPOG00000017192) #24 ENSAPOG00000017214 hsdl2 (ENSAPOG00000017268) #25 Bicolor damselfish MODERN SPECIES 2604 fktn (ENSSPAG00000008828) ufc1 (ENSSPAG00000008850) ENSSPAG00000008857 #21 ENSSPAG00000008867 #22 ugcg (ENSSPAG00000008883) #23 PTBP3 (ENSSPAG00000008948) #24 ENSSPAG00000008968 ##24 ENSSPAG00000008985 hsdl2 (ENSSPAG00000008994) #25 Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b ENSGT00940000165965 Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00390000008196 ENSGT00940000155803 ENSGT00940000153212 ENSGT00520000055626.a ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000153662.B #18 ENSGT00390000015874 #17 ENSGT00940000155147 ENSGT00940000154399 ENSGT01020000232179 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000156466 ENSGT00510000048500 ENSGT00510000049239.b.a ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b Anabantaria ANCESTRAL SPECIES 12 ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00500000044904.a.b.e.a ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT00510000049239.b.a ENSGT00940000156466 ENSGT01020000232179 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 Zig-zag eel MODERN SPECIES 3 abraxas1 (ENSMAMG00000012397) gpat3 (ENSMAMG00000012423) ENSMAMG00000012447 nkx6.1 (ENSMAMG00000012450) ENSMAMG00000012465 ENSMAMG00000012520 ENSMAMG00000012527 ENSMAMG00000012536 ENSMAMG00000012591 ENSMAMG00000012597 ENSMAMG00000012606 ENSMAMG00000012623 ENSMAMG00000012715 ENSMAMG00000012728 ENSMAMG00000012737 ENSMAMG00000012753 #22 ugcg (ENSMAMG00000012770) #23 PTBP3 (ENSMAMG00000012797) #24 hsdl2 (ENSMAMG00000012828) #25 ENSMAMG00000026525 ENSMAMG00000012877 ENSMAMG00000012903 ENSMAMG00000012911 #19 ENSMAMG00000025574 ENSMAMG00000012957 ENSMAMG00000012970 #17 ENSMAMG00000012989 #18 ENSMAMG00000026060 ENSMAMG00000028139 ENSMAMG00000013122 ENSMAMG00000013157 Anabantoidei ANCESTRAL SPECIES 16 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000158928 ENSGT00940000159475.c ENSGT00390000018651.a ENSGT00500000044904.a.b.e.a ENSGT00950000183234 ENSGT00940000155402.a.b ENSGT01030000234908 ENSGT00940000156466 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000155803 ENSGT00940000153212 Climbing perch MODERN SPECIES 3 ENSATEG00000023384 ENSATEG00000023381 ENSATEG00000023366 ENSATEG00000023346 ENSATEG00000023334 ENSATEG00000023331 ENSATEG00000023327 ENSATEG00000023303 ENSATEG00000023290 ENSATEG00000023263 ENSATEG00000023251 ENSATEG00000023245 ENSATEG00000027059 ENSATEG00000023228 #20 ENSATEG00000023224 #21 ENSATEG00000023220 #22 ugcg (ENSATEG00000023209) #23 PTBP3 (ENSATEG00000023202) #24 hsdl2 (ENSATEG00000023185) #25 ENSATEG00000028550 ENSATEG00000023171 ENSATEG00000023140 ENSATEG00000028148 ENSATEG00000023126 ENSATEG00000023115 #17 ENSATEG00000023085 #18 ENSATEG00000023062 rnf224 (ENSATEG00000023055) ENSATEG00000023054 ENSATEG00000023030 ENSATEG00000023021 Siamese fighting fish MODERN SPECIES 3 HELQ (ENSBSLG00000012143) mrps18c (ENSBSLG00000012122) abraxas1 (ENSBSLG00000011978) nkx6.1 (ENSBSLG00000011617) rpl17 (ENSBSLG00000011009) MFHAS1 (ENSBSLG00000010998) ppp1r3b (ENSBSLG00000010990) lmbrd2b (ENSBSLG00000010833) ENSBSLG00000010780 capslb (ENSBSLG00000010741) ENSBSLG00000010687 myo5b (ENSBSLG00000010335) ENSBSLG00000010325 ENSBSLG00000009255 #19 ENSBSLG00000009176 #21 ENSBSLG00000009149 #22 ugcg (ENSBSLG00000009078) #23 PTBP3 (ENSBSLG00000008884) #24 hsdl2 (ENSBSLG00000008841) #25 ENSBSLG00000008822 atp6v1g1 (ENSBSLG00000008820) slc31a1 (ENSBSLG00000008816) slc25a46 (ENSBSLG00000008706) #17 ENSBSLG00000008687 wdr36 (ENSBSLG00000008499) #18 pisd (ENSBSLG00000008299) rnf224 (ENSBSLG00000014646) ENSBSLG00000014487 ENSBSLG00000014481 FER (ENSBSLG00000013971) cdc26 (ENSBSLG00000013950) Carangaria ANCESTRAL SPECIES 17 ENSGT00940000155803 ENSGT00940000153212 ENSGT00520000055626.a ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000153662.B #18 ENSGT00390000015874 #17 ENSGT00940000155147 ENSGT00940000154399 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000156466 ENSGT00510000048500 ENSGT00510000049239.b.a ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b Carangaria_A ANCESTRAL SPECIES 103 ENSGT00940000153662.B #18 ENSGT00390000015874 #17 ENSGT00940000155147 ENSGT00940000154399 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000165500 ENSGT00500000044904.a.b.e.a ENSGT00940000156466 ENSGT01030000234908 Seriola ANCESTRAL SPECIES 174 ENSGT00940000153662.B #18 ENSGT00390000015874 #17 ENSGT00940000155147 ENSGT00940000154399 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 Yellowtail amberjack MODERN SPECIES 2444 ENSSLDG00000018693 #21 ENSSLDG00000018699 #22 ugcg (ENSSLDG00000018712) #23 PTBP3 (ENSSLDG00000018737) #24 hsdl2 (ENSSLDG00000018779) #25 Greater amberjack MODERN SPECIES 251 wdr36 (ENSSDUG00000002806) #18 slc25a46 (ENSSDUG00000002793) #17 slc31a1 (ENSSDUG00000002773) atp6v1g1 (ENSSDUG00000002754) ENSSDUG00000002711 #19 ENSSDUG00000002687 #21 ENSSDUG00000002680 #22 ugcg (ENSSDUG00000002652) #23 PTBP3 (ENSSDUG00000002628) #24 hsdl2 (ENSSDUG00000002605) #25 ENSSDUG00000002591 ENSSDUG00000002583 Barramundi perch MODERN SPECIES 522 prpf4 (ENSLCAG00010006299) ENSLCAG00010006325 cdc26 (ENSLCAG00010006330) FER (ENSLCAG00010006415) ENSLCAG00010006662 rnf224 (ENSLCAG00010006664) pisd (ENSLCAG00010006667) ENSLCAG00010006677 ENSLCAG00010006695 ythdc1 (ENSLCAG00010006731) wdr36 (ENSLCAG00010006798) #18 slc25a46 (ENSLCAG00010006922) #17 slc31a1 (ENSLCAG00010006923) atp6v1g1 (ENSLCAG00010006927) ENSLCAG00010006947 #19 ENSLCAG00010006980 #22 ugcg (ENSLCAG00010006995) #23 PTBP3 (ENSLCAG00010007040) #24 hsdl2 (ENSLCAG00010007084) #25 ENSLCAG00010007136 ENSLCAG00010007145 ENSLCAG00010007148 capslb (ENSLCAG00010007159) Pleuronectoidei ANCESTRAL SPECIES 69 ENSGT00940000155305.b.a ENSGT00390000005811 ENSGT00530000063335.B.a.b ENSGT00940000156820.a.a.f ENSGT00390000017892 ENSGT00940000156117.e.a ENSGT00940000160028 ENSGT01030000234539.a.a.b.b ENSGT00940000153654.ve.a ENSGT00390000002575 ENSGT00390000015930 ENSGT00440000039046 ENSGT00940000166823 ENSGT00940000153731.a.a ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00940000154578.B ENSGT00390000007153.a.a.a ENSGT00940000157749 ENSGT00440000033872 ENSGT00390000008802.a.a ENSGT01030000234773 ENSGT00940000155290.C ENSGT00940000155841.c.a ENSGT00940000171469 ENSGT00940000167171 ENSGT00550000074961.a ENSGT00940000153772.B ENSGT00390000016384.m ENSGT00990000203759 ENSGT00940000157194 Tongue sole DUPLICATION Tongue sole MODERN SPECIES 398 TJP2 (ENSCSEG00000008859) ENSCSEG00000008877 ENTREP1 (ENSCSEG00000008881) APBA1 (ENSCSEG00000008905) ptar1 (ENSCSEG00000008942) mamdc2a (ENSCSEG00000008959) arid3c (ENSCSEG00000008983) pias2 (ENSCSEG00000009007) ube2l3b (ENSCSEG00000009026) ydjc (ENSCSEG00000009032) zgc:86811 (ENSCSEG00000009054) rad17 (ENSCSEG00000009075) ccdc125 (ENSCSEG00000009087) isl1a (ENSCSEG00000009101) ENSCSEG00000009116 #21 ENSCSEG00000009119 #22 si:dkey-3h3.3 (ENSCSEG00000009130) golph3a (ENSCSEG00000009145) ENSCSEG00000009155 npr3 (ENSCSEG00000009193) ENSCSEG00000009205 ENSCSEG00000009210 zfr (ENSCSEG00000009224) sh3glb2a (ENSCSEG00000009303) ENSCSEG00000009481 ENSCSEG00000009488 PPP6C (ENSCSEG00000009498) mns1 (ENSCSEG00000009520) olfml2a (ENSCSEG00000009523) ENSCSEG00000009532 rpl35 (ENSCSEG00000009552) Tongue sole MODERN SPECIES 397 naa35 (ENSCSEG00000011579) GOLM1 (ENSCSEG00000011570) ENSCSEG00000011566 ENSCSEG00000011560 ENSCSEG00000011555 ENSCSEG00000011533 cert1a (ENSCSEG00000011472) ENSCSEG00000011431 hapln1a (ENSCSEG00000011392) ENSCSEG00000011375 tmem167a (ENSCSEG00000011371) EDIL3 (ENSCSEG00000011361) ENSCSEG00000011359 mthfd2 (ENSCSEG00000011344) mob1a (ENSCSEG00000011323) ENSCSEG00000011308 #22 golph3a (ENSCSEG00000011294) ndufaf2 (ENSCSEG00000011277) smim15 (ENSCSEG00000011276) ENSCSEG00000011270 ENSCSEG00000011255 ENSCSEG00000011246 ENSCSEG00000011239 zfr (ENSCSEG00000011169) ENSCSEG00000011154 npr3 (ENSCSEG00000011131) ENSCSEG00000011126 tet3 (ENSCSEG00000011097) ENSCSEG00000011094 ap3m2 (ENSCSEG00000011074) rpl35 (ENSCSEG00000011059) Turbot MODERN SPECIES 21 FXN (ENSSMAG00000031712) APBA1 (ENSSMAG00000017237) PTAR1 (ENSSMAG00000017170) mamdc2a (ENSSMAG00000017071) ENSSMAG00000016993 ENSSMAG00000016781 ENSSMAG00000035488 ENSSMAG00000021713 ENSSMAG00000034299 zgc:86811 (ENSSMAG00000023550) ENSSMAG00000024431 ccdc125 (ENSSMAG00000021971) ENSSMAG00000023073 isl1a (ENSSMAG00000000228) ENSSMAG00000000244 #21 ENSSMAG00000026210 #22 ENSSMAG00000000247 golph3a (ENSSMAG00000000248) npr3 (ENSSMAG00000000302) ENSSMAG00000000313 ENSSMAG00000000318 zfr (ENSSMAG00000000320) ENSSMAG00000000340 ENSSMAG00000000373 ENSSMAG00000000378 PPP6C (ENSSMAG00000000381) GOLGA1 (ENSSMAG00000000398) ENSSMAG00000000454 OLFML2A (ENSSMAG00000000459) nr6a1a (ENSSMAG00000000466) ENSSMAG00000000478 Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00500000044904.a.b.e.b.a.a ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a Tetraodontidae ANCESTRAL SPECIES 21 ENSGT00390000008196 ENSGT00940000155803.l ENSGT00940000153212 ENSGT00520000055626.a ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000153662.B #18 ENSGT00390000015874 #17 ENSGT00940000155147 ENSGT00940000154399 ENSGT01030000234638.b.b.d #19 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.a ENSGT00390000002865 ENSGT00910000144278 ENSGT01030000234614.A.l.a ENSGT00940000154929.A ENSGT00940000165675 ENSGT00940000175255 ENSGT00390000007731 ENSGT01050000244941.A ENSGT00940000158226 ENSGT00940000159886 ENSGT00390000009872 Fugu MODERN SPECIES 18 fktn (ENSTRUG00000010423) ufc1 (ENSTRUG00000029986) ythdc1 (ENSTRUG00000010142) ENSTRUG00000009845 ENSTRUG00000020043 pisd (ENSTRUG00000009670) rnf224 (ENSTRUG00000024290) ENSTRUG00000021391 FER (ENSTRUG00000009120) cdc26 (ENSTRUG00000022304) slc25a46 (ENSTRUG00000008245) #17 slc31a1 (ENSTRUG00000008116) atp6v1g1 (ENSTRUG00000030868) ENSTRUG00000031346 ENSTRUG00000007714 #21 ENSTRUG00000022605 #22 ugcg (ENSTRUG00000007475) #23 PTBP3 (ENSTRUG00000007042) #24 hsdl2 (ENSTRUG00000006792) #25 ENSTRUG00000022497 ENSTRUG00000030319 PHF24 (ENSTRUG00000006683) PIGO (ENSTRUG00000006340) ENSTRUG00000019548 ENSTRUG00000004684 ENSTRUG00000027489 ENSTRUG00000031647 lpar1 (ENSTRUG00000004593) MUSK (ENSTRUG00000003366) rassf6 (ENSTRUG00000003254) si:busm1-57f23.1 (ENSTRUG00000002521) Tetraodon MODERN SPECIES 19 ugt2a6 (ENSTNIG00000013244) ythdc1 (ENSTNIG00000013243) ENSTNIG00000013245 pisd (ENSTNIG00000013246) rnf224 (ENSTNIG00000013247) FER (ENSTNIG00000013248) cdc26 (ENSTNIG00000013249) prpf4 (ENSTNIG00000013250) wdr36 (ENSTNIG00000013251) #18 slc25a46 (ENSTNIG00000013252) #17 slc31a1 (ENSTNIG00000010868) atp6v1g1 (ENSTNIG00000010869) ENSTNIG00000000382 pou5f3 (ENSTNIG00000003465) ENSTNIG00000002793 #19 ENSTNIG00000002792 #22 ugcg (ENSTNIG00000002791) #23 PTBP3 (ENSTNIG00000002790) #24 hsdl2 (ENSTNIG00000002789) #25 PHF24 (ENSTNIG00000002627) PIGO (ENSTNIG00000002626) stoml2 (ENSTNIG00000002625) UNC13B (ENSTNIG00000002624) ENSTNIG00000002623 lpar1 (ENSTNIG00000002622) MUSK (ENSTNIG00000002621) rassf6 (ENSTNIG00000000060) si:busm1-57f23.1 (ENSTNIG00000002620) ENSTNIG00000001798 tmem267 (ENSTNIG00000001961) Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00940000155803.l ENSGT00940000153212 ENSGT00520000055626.a ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00500000044904.a.b.e.b.a.a.d ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b Ballan wrasse MODERN SPECIES 94 fktn (ENSLBEG00000020900) UFC1 (ENSLBEG00000020876) ythdc1 (ENSLBEG00000020831) ENSLBEG00000020807 pisd (ENSLBEG00000020771) RNF224 (ENSLBEG00000020748) ENSLBEG00000020732 FER (ENSLBEG00000020677) prpf4 (ENSLBEG00000020611) atp6v1g1 (ENSLBEG00000020599) slc31a1 (ENSLBEG00000020559) slc25a46 (ENSLBEG00000020527) #17 wdr36 (ENSLBEG00000020493) #18 ENSLBEG00000020400 #19 ENSLBEG00000020361 #21 ENSLBEG00000020335 #22 ppp1r3b (ENSLBEG00000020310) ENSLBEG00000020296 CAPSL (ENSLBEG00000020278) ENSLBEG00000020263 capslb (ENSLBEG00000020249) ENSLBEG00000020087 lmbrd2b (ENSLBEG00000019883) ENSLBEG00000019807 ENSLBEG00000019795 ENSLBEG00000019719 myo5b (ENSLBEG00000019611) ENSLBEG00000019590 capslb (ENSLBEG00000019559) ENSLBEG00000019533 hsdl2 (ENSLBEG00000019478) #25 Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00940000155803.l ENSGT00940000153212 ENSGT00520000055626.a ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00500000044904.a.b.e.b.a.b ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b Perciformes ANCESTRAL SPECIES 16 ENSGT00390000008196 ENSGT00940000155803.l ENSGT00520000055626.a ENSGT00390000013484 ENSGT00510000050587 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.b ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00500000044904.a.b.e.b.a.b ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT00940000165965 Cottioidei ANCESTRAL SPECIES 44 ENSGT00390000014471 ENSGT00390000008196 ENSGT00940000155803.l ENSGT00520000055626.a ENSGT00390000013484 ENSGT00940000176948 ENSGT00940000154997 ENSGT00390000008457 ENSGT00940000156006 ENSGT00940000154399 ENSGT00940000155147 ENSGT00390000015874 #17 ENSGT00940000153662.B #18 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 Stickleback MODERN SPECIES 13 ENSGACG00000015512 apc (ENSGACG00000015508) fktn (ENSGACG00000015493) ufc1 (ENSGACG00000015490) ythdc1 (ENSGACG00000015486) ENSGACG00000015485 ENSGACG00000015482 pisd (ENSGACG00000015481) FER (ENSGACG00000015480) prpf4 (ENSGACG00000015476) atp6v1g1 (ENSGACG00000015475) slc31a1 (ENSGACG00000015467) slc25a46 (ENSGACG00000015465) #17 wdr36 (ENSGACG00000015461) #18 ENSGACG00000015458 #19 ENSGACG00000015456 #22 ugcg (ENSGACG00000015449) #23 PTBP3 (ENSGACG00000015446) #24 hsdl2 (ENSGACG00000015440) #25 ENSGACG00000015437 ENSGACG00000015435 ENSGACG00000015434 Lumpfish MODERN SPECIES 3 fktn (ENSCLMG00005011771) UFC1 (ENSCLMG00005011774) ythdc1 (ENSCLMG00005011777) ENSCLMG00005011838 pisd (ENSCLMG00005011840) ENSCLMG00005011856 FER (ENSCLMG00005011862) cdc26 (ENSCLMG00005012361) prpf4 (ENSCLMG00005012371) atp6v1g1 (ENSCLMG00005012827) slc31a1 (ENSCLMG00005012830) SLC25A46 (ENSCLMG00005012834) #17 wdr36 (ENSCLMG00005012848) #18 ENSCLMG00005013067 #19 ENSCLMG00005013860 #21 ENSCLMG00005013862 #22 ugcg (ENSCLMG00005013863) #23 PTBP3 (ENSCLMG00005013865) #24 hsdl2 (ENSCLMG00005013866) #25 prkaa1 (ENSCLMG00005013868) ttc33 (ENSCLMG00005013916) ptger4b (ENSCLMG00005013917) MAP1B (ENSCLMG00005013918) ptcd2 (ENSCLMG00005013920) CACFD1 (ENSCLMG00005013921) ENSCLMG00005013922 garnl3 (ENSCLMG00005013925) ptges (ENSCLMG00005014209) usp20 (ENSCLMG00005014215) RPL7A (ENSCLMG00005014319) ENSCLMG00005014326 Perciformes_a ANCESTRAL SPECIES 87 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00390000002634.a.f.b.a.a.b ENSGT00940000156466 ENSGT01030000234908 ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00500000044904.a.b.e.b.a.b ENSGT00390000018651.a Pike perch MODERN SPECIES 236 ENSSLUG00000020438 ENSSLUG00000020436 ENSSLUG00000020431 #21 ENSSLUG00000020425 #22 ugcg (ENSSLUG00000020410) #23 ENSSLUG00000020294 #24 ENSSLUG00000020268 hsdl2 (ENSSLUG00000020252) #25 ENSSLUG00000020234 ENSSLUG00000020228 ENSSLUG00000020225 ENSSLUG00000020222 ENSSLUG00000020219 ENSSLUG00000020212 ENSSLUG00000020207 ENSSLUG00000020203 capslb (ENSSLUG00000020197) ENSSLUG00000020195 myo5b (ENSSLUG00000019904) Eupecaria_C ANCESTRAL SPECIES 9 ENSGT01030000234638.b.b.d #19 ENSGT00530000066485 #21 ENSGT00510000047669 #22 ENSGT00390000012898 #23 ENSGT01050000244924.a.a.a #24 ENSGT00940000156729 #25 ENSGT00940000156466 ENSGT00510000049239.b.a ENSGT00940000155402.a.b ENSGT00950000183234 ENSGT00500000044904.a.b.e.b.a.b ENSGT00390000018651.a ENSGT00940000159475.c ENSGT00940000158928 ENSGT00950000183010.a.a.b ENSGT00940000160897 ENSGT01030000234574.B.c.b.a.a.a ENSGT00530000063424.b Gilthead seabream MODERN SPECIES 3 ENSSAUG00010011650 ppp1r3b (ENSSAUG00010011651) ENSSAUG00010011654 MFHAS1 (ENSSAUG00010011655) gpat3 (ENSSAUG00010011657) ENSSAUG00010011658 ENSSAUG00010011660 gpat3 (ENSSAUG00010011666) lonp2 (ENSSAUG00010011673) ENSSAUG00010011699 ENSSAUG00010011700 ENSSAUG00010011701 ENSSAUG00010011702 ENSSAUG00010011713 #19 ENSSAUG00010012186 #21 ENSSAUG00010012201 #22 ugcg (ENSSAUG00010012205) #23 ythdc1 (ENSSAUG00010012216) ufc1 (ENSSAUG00010012220) fktn (ENSSAUG00010012225) wdr36 (ENSSAUG00010012262) #18 slc25a46 (ENSSAUG00010013163) #17 slc31a1 (ENSSAUG00010013164) atp6v1g1 (ENSSAUG00010013166) ENSSAUG00010013169 hsdl2 (ENSSAUG00010013171) #25 ENSSAUG00010013295 #24 ENSSAUG00010013302 ENSSAUG00010013307 ENSSAUG00010013310 ENSSAUG00010013311