Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000154824.b	ENSGT00390000002684	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36
Glires	ANCESTRAL SPECIES	6	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37
Kangaroo rat	MODERN SPECIES	337													ENSDORG00000013087 #19	Adgrg3 (ENSDORG00000013090) #20	Drc7 (ENSDORG00000013093) #21	Katnb1 (ENSDORG00000013099) #22	Kifc3 (ENSDORG00000026306) #23	ENSDORG00000023432 #24	ENSDORG00000001874 #25	ENSDORG00000025807 #26	Tepp (ENSDORG00000001883) #27	Zfp319 (ENSDORG00000027637) #28	Usb1 (ENSDORG00000001888) #29	Mmp15 (ENSDORG00000001890) #30	Cfap20 (ENSDORG00000027182) #31	Csnk2a2 (ENSDORG00000001893) #32	Ccdc113 (ENSDORG00000008710) #33	Prss54 (ENSDORG00000008712) #34	Gins3 (ENSDORG00000023548) #35	Ndrg4 (ENSDORG00000002097) #36	Setd6 (ENSDORG00000002098) #37
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37
Muroidea	ANCESTRAL SPECIES	19	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT00900000143332	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
Chinese hamster chok1gshd	MODERN SPECIES	112	Arl2bp (ENSCGRG00001017105)	Pllp (ENSCGRG00001021249)	ENSCGRG00001000060	Ccl22 (ENSCGRG00001014034)	ENSCGRG00001012575	Ccl17 (ENSCGRG00001015970)	CIAPIN1 (ENSCGRG00001002424)	Coq9 (ENSCGRG00001013511)	Polr2c (ENSCGRG00001019477)	Dok4 (ENSCGRG00001001122)	Ccdc102a (ENSCGRG00001016953)	Adgrg5 (ENSCGRG00001021484)	Adgrg1 (ENSCGRG00001013796) #19	Adgrg3 (ENSCGRG00001002942) #20	Drc7 (ENSCGRG00001004820) #21	Katnb1 (ENSCGRG00001005016) #22	Kifc3 (ENSCGRG00001015854) #23	Cngb1 (ENSCGRG00001006048)	Tepp (ENSCGRG00001012906) #27	Zfp319 (ENSCGRG00001009557) #28	USB1 (ENSCGRG00001011243) #29	Mmp15 (ENSCGRG00001020478) #30	Cfap20 (ENSCGRG00001012310) #31	Csnk2a2 (ENSCGRG00001002993) #32	Ccdc113 (ENSCGRG00001014002) #33	Prss54 (ENSCGRG00001018712) #34	Gins3 (ENSCGRG00001000318) #35	Ndrg4 (ENSCGRG00001007892) #36	Cnot1 (ENSCGRG00001016365)	Setd6 (ENSCGRG00001022683) #37	ENSCGRG00001001590
Golden Hamster	MODERN SPECIES	701	Rspry1 (ENSMAUG00000009329)	Arl2bp (ENSMAUG00000011190)	Pllp (ENSMAUG00000017356)	Ccl22 (ENSMAUG00000017483)	ENSMAUG00000019770	Ccl17 (ENSMAUG00000000481)	Ciapin1 (ENSMAUG00000007775)	Coq9 (ENSMAUG00000009865)	ENSMAUG00000000779	Dok4 (ENSMAUG00000004807)	Ccdc102a (ENSMAUG00000008289)	Adgrg5 (ENSMAUG00000016978)	Adgrg1 (ENSMAUG00000004640) #19	Adgrg3 (ENSMAUG00000011218) #20	Drc7 (ENSMAUG00000009409) #21	Katnb1 (ENSMAUG00000012199) #22	ENSMAUG00000009145	Kifc3 (ENSMAUG00000018895) #23	ENSMAUG00000015513 #25	Tepp (ENSMAUG00000000492) #27	Zfp319 (ENSMAUG00000006878) #28	Usb1 (ENSMAUG00000007832) #29	Mmp15 (ENSMAUG00000008723) #30	Cfap20 (ENSMAUG00000002778) #31	Csnk2a2 (ENSMAUG00000008176) #32	Ccdc113 (ENSMAUG00000000235) #33	Prss54 (ENSMAUG00000000894) #34	Gins3 (ENSMAUG00000008574) #35	Ndrg4 (ENSMAUG00000016805) #36	Setd6 (ENSMAUG00000004853) #37	ENSMAUG00000009731
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37
Northern American deer mouse	MODERN SPECIES	18	Rspry1 (ENSPEMG00000016275)	Arl2bp (ENSPEMG00000006643)	ENSPEMG00000029140	Ccl22 (ENSPEMG00000020137)	ENSPEMG00000029339	Ccl17 (ENSPEMG00000025258)	Ciapin1 (ENSPEMG00000011946)	Coq9 (ENSPEMG00000008119)	Polr2c (ENSPEMG00000014204)	Dok4 (ENSPEMG00000015614)	Ccdc102a (ENSPEMG00000000438)	Adgrg5 (ENSPEMG00000019150)	Adgrg1 (ENSPEMG00000004510) #19	Adgrg3 (ENSPEMG00000019455) #20	Drc7 (ENSPEMG00000019837) #21	Katnb1 (ENSPEMG00000000120) #22	Kifc3 (ENSPEMG00000011707) #23	ENSPEMG00000018348 #25	ENSPEMG00000025572 #26	Tepp (ENSPEMG00000013610) #27	Zfp319 (ENSPEMG00000028896) #28	Usb1 (ENSPEMG00000016183) #29	Mmp15 (ENSPEMG00000012320) #30	Cfap20 (ENSPEMG00000011496) #31	Csnk2a2 (ENSPEMG00000029224) #32	Ccdc113 (ENSPEMG00000010298) #33	Prss54 (ENSPEMG00000009039) #34	Gins3 (ENSPEMG00000027744) #35	Ndrg4 (ENSPEMG00000005871) #36	Setd6 (ENSPEMG00000000631) #37	ENSPEMG00000026593
Prairie vole	MODERN SPECIES	12	Rspry1 (ENSMOCG00000003260)	Arl2bp (ENSMOCG00000021516)	Pllp (ENSMOCG00000013812)	Ccl22 (ENSMOCG00000013272)	Cx3cl1 (ENSMOCG00000011322)	Ccl17 (ENSMOCG00000017313)	Ciapin1 (ENSMOCG00000015912)	Coq9 (ENSMOCG00000021431)	Polr2c (ENSMOCG00000013652)	Dok4 (ENSMOCG00000009435)	Ccdc102a (ENSMOCG00000007925)	Adgrg5 (ENSMOCG00000014336)	Adgrg1 (ENSMOCG00000016207) #19	Adgrg3 (ENSMOCG00000002472) #20	Drc7 (ENSMOCG00000019056) #21	Katnb1 (ENSMOCG00000008432) #22	Kifc3 (ENSMOCG00000022176) #23	Cngb1 (ENSMOCG00000010582)	Tepp (ENSMOCG00000002923) #27	Zfp319 (ENSMOCG00000005503) #28	Usb1 (ENSMOCG00000022647) #29	Mmp15 (ENSMOCG00000004241) #30	ENSMOCG00000010223	Cfap20 (ENSMOCG00000012774) #31	Csnk2a2 (ENSMOCG00000021876) #32	Ccdc113 (ENSMOCG00000017588) #33	Prss54 (ENSMOCG00000022303) #34	Gins3 (ENSMOCG00000010456) #35	Ndrg4 (ENSMOCG00000019186) #36	Setd6 (ENSMOCG00000019435) #37	Cnot1 (ENSMOCG00000017969)
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
Mus	ANCESTRAL SPECIES	6	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000154824.b	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
spretus	MODERN SPECIES	17	Rspry1 (MGP_SPRETEiJ_G0032520)	Arl2bp (MGP_SPRETEiJ_G0032521)	Pllp (MGP_SPRETEiJ_G0032522)	Ccl22 (MGP_SPRETEiJ_G0032523)	Cx3cl1 (MGP_SPRETEiJ_G0032524)	Ccl17 (MGP_SPRETEiJ_G0032525)	Ciapin1 (MGP_SPRETEiJ_G0032526)	Coq9 (MGP_SPRETEiJ_G0032527)	MGP_SPRETEiJ_G0032528	Dok4 (MGP_SPRETEiJ_G0032529)	Ccdc102a (MGP_SPRETEiJ_G0032530)	Adgrg5 (MGP_SPRETEiJ_G0032531)	Adgrg1 (MGP_SPRETEiJ_G0032532) #19	Adgrg3 (MGP_SPRETEiJ_G0032533) #20	Drc7 (MGP_SPRETEiJ_G0032534) #21	Katnb1 (MGP_SPRETEiJ_G0032535) #22	Kifc3 (MGP_SPRETEiJ_G0032536) #23	Cngb1 (MGP_SPRETEiJ_G0032537)	Tepp (MGP_SPRETEiJ_G0032538) #27	Zfp319 (MGP_SPRETEiJ_G0032539) #28	Usb1 (MGP_SPRETEiJ_G0032540) #29	Mmp15 (MGP_SPRETEiJ_G0032541) #30	Cfap20 (MGP_SPRETEiJ_G0032542) #31	Csnk2a2 (MGP_SPRETEiJ_G0032543) #32	Ccdc113 (MGP_SPRETEiJ_G0032544) #33	Prss54 (MGP_SPRETEiJ_G0032545) #34	Gins3 (MGP_SPRETEiJ_G0032546) #35	Ndrg4 (MGP_SPRETEiJ_G0032547) #36	Setd6 (MGP_SPRETEiJ_G0032548) #37	Cnot1 (MGP_SPRETEiJ_G0032549)	Slc38a7 (MGP_SPRETEiJ_G0032550)
Steppe mouse	MODERN SPECIES	3188	Rspry1 (ENSMSIG00000003743)	ENSMSIG00000003803	Pllp (ENSMSIG00000003961)	Ccl22 (ENSMSIG00000003997)	Cx3cl1 (ENSMSIG00000004032)	Ccl17 (ENSMSIG00000004052)	Ciapin1 (ENSMSIG00000004084)	Coq9 (ENSMSIG00000004128)	Polr2c (ENSMSIG00000004232)	Dok4 (ENSMSIG00000004367)	Ccdc102a (ENSMSIG00000004396)	Adgrg5 (ENSMSIG00000004455)	Adgrg1 (ENSMSIG00000004522) #19	Adgrg3 (ENSMSIG00000004596) #20	Drc7 (ENSMSIG00000004646) #21	Katnb1 (ENSMSIG00000004682) #22	Kifc3 (ENSMSIG00000004726) #23	Cngb1 (ENSMSIG00000004859)	ENSMSIG00000005046 #27	Zfp319 (ENSMSIG00000005132) #28	Usb1 (ENSMSIG00000005140) #29	Mmp15 (ENSMSIG00000005181) #30	Cfap20 (ENSMSIG00000005199) #31	ENSMSIG00000005247 #32	Ccdc113 (ENSMSIG00000005318) #33	Prss54 (ENSMSIG00000005343) #34	Gins3 (ENSMSIG00000005389) #35	Ndrg4 (ENSMSIG00000005411) #36	Setd6 (ENSMSIG00000005533) #37	Cnot1 (ENSMSIG00000005580)	Slc38a7 (ENSMSIG00000006282)
Mouse	MODERN SPECIES	17	Rspry1 (ENSMUSG00000050079)	Arl2bp (ENSMUSG00000031776)	Pllp (ENSMUSG00000031775)	Ccl22 (ENSMUSG00000031779)	Cx3cl1 (ENSMUSG00000031778)	Ccl17 (ENSMUSG00000031780)	Ciapin1 (ENSMUSG00000031781)	Coq9 (ENSMUSG00000031782)	Polr2c (ENSMUSG00000031783)	Dok4 (ENSMUSG00000040631)	Ccdc102a (ENSMUSG00000063605)	Adgrg5 (ENSMUSG00000061577)	Adgrg1 (ENSMUSG00000031785) #19	Adgrg3 (ENSMUSG00000060470) #20	Drc7 (ENSMUSG00000031786) #21	Katnb1 (ENSMUSG00000031787) #22	Kifc3 (ENSMUSG00000031788) #23	Cngb1 (ENSMUSG00000031789)	Tepp (ENSMUSG00000090206) #27	Zfp319 (ENSMUSG00000046556) #28	Usb1 (ENSMUSG00000031792) #29	Mmp15 (ENSMUSG00000031790) #30	Cfap20 (ENSMUSG00000031796) #31	Csnk2a2 (ENSMUSG00000046707) #32	Ccdc113 (ENSMUSG00000036598) #33	Prss54 (ENSMUSG00000048400) #34	Gins3 (ENSMUSG00000031669) #35	Ndrg4 (ENSMUSG00000036564) #36	Setd6 (ENSMUSG00000031671) #37	Cnot1 (ENSMUSG00000036550)	Sap18b (ENSMUSG00000061104)
Ryukyu mouse	MODERN SPECIES	17	Rspry1 (MGP_CAROLIEiJ_G0031401)	Arl2bp (MGP_CAROLIEiJ_G0031402)	Pllp (MGP_CAROLIEiJ_G0031403)	Ccl22 (MGP_CAROLIEiJ_G0031404)	Cx3cl1 (MGP_CAROLIEiJ_G0031405)	Ccl17 (MGP_CAROLIEiJ_G0031406)	Ciapin1 (MGP_CAROLIEiJ_G0031407)	Coq9 (MGP_CAROLIEiJ_G0031408)	MGP_CAROLIEiJ_G0031409	Dok4 (MGP_CAROLIEiJ_G0031410)	Ccdc102a (MGP_CAROLIEiJ_G0031411)	Adgrg5 (MGP_CAROLIEiJ_G0031412)	Adgrg1 (MGP_CAROLIEiJ_G0031413) #19	Adgrg3 (MGP_CAROLIEiJ_G0031414) #20	Drc7 (MGP_CAROLIEiJ_G0031415) #21	Katnb1 (MGP_CAROLIEiJ_G0031416) #22	Kifc3 (MGP_CAROLIEiJ_G0031417) #23	Cngb1 (MGP_CAROLIEiJ_G0031418)	Tepp (MGP_CAROLIEiJ_G0031419) #27	Zfp319 (MGP_CAROLIEiJ_G0031420) #28	Usb1 (MGP_CAROLIEiJ_G0031421) #29	Mmp15 (MGP_CAROLIEiJ_G0031422) #30	Cfap20 (MGP_CAROLIEiJ_G0031423) #31	Csnk2a2 (MGP_CAROLIEiJ_G0031424) #32	Ccdc113 (MGP_CAROLIEiJ_G0031425) #33	Prss54 (MGP_CAROLIEiJ_G0031426) #34	Gins3 (MGP_CAROLIEiJ_G0031427) #35	Ndrg4 (MGP_CAROLIEiJ_G0031428) #36	Setd6 (MGP_CAROLIEiJ_G0031429) #37	Cnot1 (MGP_CAROLIEiJ_G0031430)	Slc38a7 (MGP_CAROLIEiJ_G0031431)
Shrew mouse	MODERN SPECIES	12	Rspry1 (MGP_PahariEiJ_G0022999)	Arl2bp (MGP_PahariEiJ_G0023000)	MGP_PahariEiJ_G0023001	Ccl22 (MGP_PahariEiJ_G0023002)	Cx3cl1 (MGP_PahariEiJ_G0023003)	Ccl17 (MGP_PahariEiJ_G0023004)	Ciapin1 (MGP_PahariEiJ_G0023005)	Coq9 (MGP_PahariEiJ_G0023006)	MGP_PahariEiJ_G0023007	Dok4 (MGP_PahariEiJ_G0023008)	Ccdc102a (MGP_PahariEiJ_G0023009)	Adgrg5 (MGP_PahariEiJ_G0023010)	Adgrg1 (MGP_PahariEiJ_G0023011) #19	Adgrg3 (MGP_PahariEiJ_G0023012) #20	Drc7 (MGP_PahariEiJ_G0023013) #21	Katnb1 (MGP_PahariEiJ_G0023014) #22	Kifc3 (MGP_PahariEiJ_G0023015) #23	Cngb1 (MGP_PahariEiJ_G0023016)	Tepp (MGP_PahariEiJ_G0023017) #27	Zfp319 (MGP_PahariEiJ_G0023018) #28	Usb1 (MGP_PahariEiJ_G0023019) #29	Mmp15 (MGP_PahariEiJ_G0023020) #30	Cfap20 (MGP_PahariEiJ_G0023021) #31	Csnk2a2 (MGP_PahariEiJ_G0023022) #32	Ccdc113 (MGP_PahariEiJ_G0023023) #33	Prss54 (MGP_PahariEiJ_G0023024) #34	Gins3 (MGP_PahariEiJ_G0023025) #35	Ndrg4 (MGP_PahariEiJ_G0023026) #36	Setd6 (MGP_PahariEiJ_G0023027) #37	Cnot1 (MGP_PahariEiJ_G0023028)	Slc38a7 (MGP_PahariEiJ_G0023029)
Rat	MODERN SPECIES	10	Psme3ip1 (ENSRNOG00000017841)	Rspry1 (ENSRNOG00000060931)	Arl2bp (ENSRNOG00000016991)	Pllp (ENSRNOG00000016558)	Cx3cl1 (ENSRNOG00000016326)	Ccl17 (ENSRNOG00000016278)	Ciapin1 (ENSRNOG00000016234)	Coq9 (ENSRNOG00000016190)	Polr2c (ENSRNOG00000015720)	Dok4 (ENSRNOG00000015679)	Ccdc102a (ENSRNOG00000025843)	Adgrg5 (ENSRNOG00000039891)	Adgrg1 (ENSRNOG00000014963) #19	Adgrg3 (ENSRNOG00000014896) #20	Drc7 (ENSRNOG00000025860) #21	Katnb1 (ENSRNOG00000014626) #22	Kifc3 (ENSRNOG00000014087) #23	Cngb1 (ENSRNOG00000031773)	Tepp (ENSRNOG00000013465) #27	Zfp319 (ENSRNOG00000062825) #28	Usb1 (ENSRNOG00000013216) #29	Mmp15 (ENSRNOG00000012622) #30	Cfap20 (ENSRNOG00000042179) #31	Csnk2a2 (ENSRNOG00000011933) #32	Ccdc113 (ENSRNOG00000051510) #33	Prss54 (ENSRNOG00000023092) #34	Gins3 (ENSRNOG00000011863) #35	Ndrg4 (ENSRNOG00000012482) #36	Setd6 (ENSRNOG00000012447) #37	ENSRNOG00000069069	Cnot1 (ENSRNOG00000012271)
Upper Galilee mountains blind mole rat	MODERN SPECIES	901	Rspry1 (ENSNGAG00000017375)	ENSNGAG00000022116	Pllp (ENSNGAG00000004397)	Ccl22 (ENSNGAG00000017470)	Cx3cl1 (ENSNGAG00000013151)	Ccl17 (ENSNGAG00000011684)	Ciapin1 (ENSNGAG00000020095)	Coq9 (ENSNGAG00000022657)	ENSNGAG00000012249	Dok4 (ENSNGAG00000023034)	Ccdc102a (ENSNGAG00000022414)	Adgrg5 (ENSNGAG00000014077)	Adgrg1 (ENSNGAG00000020459) #19	Adgrg3 (ENSNGAG00000022730) #20	Drc7 (ENSNGAG00000009567) #21	Katnb1 (ENSNGAG00000018107) #22	Kifc3 (ENSNGAG00000020050) #23	Cngb1 (ENSNGAG00000023187)	ENSNGAG00000021969 #26	Tepp (ENSNGAG00000020594) #27	Zfp319 (ENSNGAG00000022587) #28	Usb1 (ENSNGAG00000009703) #29	Mmp15 (ENSNGAG00000011628) #30	Cfap20 (ENSNGAG00000000909) #31	Csnk2a2 (ENSNGAG00000021802) #32	Ccdc113 (ENSNGAG00000003548) #33	Prss54 (ENSNGAG00000011258) #34
Lesser Egyptian jerboa	MODERN SPECIES	102	Il20 (ENSJJAG00000020879)	Il24 (ENSJJAG00000019483)	Pigr (ENSJJAG00000020501)	Fcamr (ENSJJAG00000016798)	AA986860 (ENSJJAG00000013213)	Yod1 (ENSJJAG00000002881)	Pfkfb2 (ENSJJAG00000022863)	C4bp (ENSJJAG00000020143)	Zp3r (ENSJJAG00000021444)	ENSJJAG00000013639	Meak7 (ENSJJAG00000010140)	Ccdc102a (ENSJJAG00000021186)	Adgrg5 (ENSJJAG00000021977)	Adgrg1 (ENSJJAG00000014381) #19	Adgrg3 (ENSJJAG00000000571) #20	Katnb1 (ENSJJAG00000017627) #22	Kifc3 (ENSJJAG00000010757) #23	Cngb1 (ENSJJAG00000014030)	ENSJJAG00000021723 #26	ENSJJAG00000013610 #27	Zfp319 (ENSJJAG00000000816) #28	Usb1 (ENSJJAG00000021859) #29	Mmp15 (ENSJJAG00000013467) #30	Ccdc113 (ENSJJAG00000020234) #33	Prss54 (ENSJJAG00000015278) #34	Gins3 (ENSJJAG00000012705) #35	Ndrg4 (ENSJJAG00000016427) #36	Setd6 (ENSJJAG00000021134) #37	Cnot1 (ENSJJAG00000000633)	Slc38a7 (ENSJJAG00000021200)	ENSJJAG00000022746
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000157894	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554.hb.a #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000157894	ENSGT00390000015052.i.a.k.b	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554.hb.a #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000157894	ENSGT00390000015052.i.a.k.b	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554.hb.a #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869
Guinea pig	MODERN SPECIES	22	RSPRY1 (ENSCPOG00000020491)	ENSCPOG00000011406	PLLP (ENSCPOG00000032449)	CCL22 (ENSCPOG00000033528)	CX3CL1 (ENSCPOG00000034448)	CCL17 (ENSCPOG00000006326)	CIAPIN1 (ENSCPOG00000027225)	COQ9 (ENSCPOG00000004549)	POLR2C (ENSCPOG00000004554)	DOK4 (ENSCPOG00000035700)	CCDC102A (ENSCPOG00000025486)	ADGRG5 (ENSCPOG00000020946)	ADGRG1 (ENSCPOG00000007121) #19	ADGRG3 (ENSCPOG00000027440) #20	DRC7 (ENSCPOG00000023534) #21	KATNB1 (ENSCPOG00000006661) #22	KIFC3 (ENSCPOG00000006673) #23	ENSCPOG00000014299 #25	ENSCPOG00000038901 #26	TEPP (ENSCPOG00000014315) #27	ZNF319 (ENSCPOG00000030357) #28	USB1 (ENSCPOG00000014325) #29	MMP15 (ENSCPOG00000014329) #30	CFAP20 (ENSCPOG00000008426) #31	CSNK2A2 (ENSCPOG00000008436) #32	CCDC113 (ENSCPOG00000002643) #33	PRSS54 (ENSCPOG00000002647) #34	GINS3 (ENSCPOG00000035821) #35	NDRG4 (ENSCPOG00000012449) #36	SETD6 (ENSCPOG00000023334) #37	CNOT1 (ENSCPOG00000013026)
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000157894	ENSGT00390000015052.i.a.k.b	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554.hb.a #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869
Long-tailed chinchilla	MODERN SPECIES	140	RSPRY1 (ENSCLAG00000004287)	ENSCLAG00000004890	PLLP (ENSCLAG00000005351)	CCL22 (ENSCLAG00000006350)	CX3CL1 (ENSCLAG00000006390)	CCL17 (ENSCLAG00000011304)	CIAPIN1 (ENSCLAG00000014217)	COQ9 (ENSCLAG00000017341)	POLR2C (ENSCLAG00000013676)	DOK4 (ENSCLAG00000014282)	CCDC102A (ENSCLAG00000008368)	ADGRG5 (ENSCLAG00000010205)	ADGRG1 (ENSCLAG00000010870) #19	ADGRG3 (ENSCLAG00000012984) #20	DRC7 (ENSCLAG00000013794) #21	KATNB1 (ENSCLAG00000014246) #22	KIFC3 (ENSCLAG00000008541) #23	ENSCLAG00000014685 #25	TEPP (ENSCLAG00000006774) #27	ZNF319 (ENSCLAG00000006953) #28	USB1 (ENSCLAG00000007363) #29	MMP15 (ENSCLAG00000007587) #30	CFAP20 (ENSCLAG00000011438) #31	CSNK2A2 (ENSCLAG00000005997) #32	CCDC113 (ENSCLAG00000006984) #33	PRSS54 (ENSCLAG00000007356) #34	GINS3 (ENSCLAG00000007546) #35	NDRG4 (ENSCLAG00000004372) #36	SETD6 (ENSCLAG00000004801) #37	CNOT1 (ENSCLAG00000006289)	SLC38A7 (ENSCLAG00000006853)
Degu	MODERN SPECIES	52	RSPRY1 (ENSODEG00000016547)	ENSODEG00000016850	PLLP (ENSODEG00000016891)	CCL22 (ENSODEG00000016843)	CX3CL1 (ENSODEG00000016594)	CCL17 (ENSODEG00000016715)	CIAPIN1 (ENSODEG00000016505)	COQ9 (ENSODEG00000016759)	POLR2C (ENSODEG00000016934)	DOK4 (ENSODEG00000016502)	CCDC102A (ENSODEG00000016989)	ADGRG5 (ENSODEG00000016829)	ADGRG1 (ENSODEG00000016469) #19	ADGRG3 (ENSODEG00000016660) #20	DRC7 (ENSODEG00000016485) #21	KATNB1 (ENSODEG00000016563) #22	ENSODEG00000016661	KIFC3 (ENSODEG00000016442) #23	ENSODEG00000016652 #25	ENSODEG00000016499 #26	TEPP (ENSODEG00000016872) #27	ZNF319 (ENSODEG00000020561) #28	USB1 (ENSODEG00000016214) #29	MMP15 (ENSODEG00000016241) #30	ENSODEG00000016796 #31	CSNK2A2 (ENSODEG00000016472) #32	CCDC113 (ENSODEG00000016688) #33	PRSS54 (ENSODEG00000016478) #34	ENSODEG00000020438	ENSODEG00000017143 #35	NDRG4 (ENSODEG00000016199) #36
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000040507	RSPRY1 (ENSHGLG00000012748)	ENSHGLG00000011615	CCL22 (ENSHGLG00000036848)	CX3CL1 (ENSHGLG00000010666)	CCL17 (ENSHGLG00000012764)	ENSHGLG00000011949	COQ9 (ENSHGLG00000011366)	POLR2C (ENSHGLG00000013465)	DOK4 (ENSHGLG00000013069)	CCDC102A (ENSHGLG00000012276)	ADGRG5 (ENSHGLG00000011843)	ADGRG1 (ENSHGLG00000013378) #19	ADGRG3 (ENSHGLG00000010674) #20	DRC7 (ENSHGLG00000016692) #21	KATNB1 (ENSHGLG00000013445) #22	KIFC3 (ENSHGLG00000010429) #23	ENSHGLG00000010847 #25	ENSHGLG00000016148	TEPP (ENSHGLG00000012890) #27	USB1 (ENSHGLG00000037991) #29	MMP15 (ENSHGLG00000014300) #30	CFAP20 (ENSHGLG00000011587) #31	CSNK2A2 (ENSHGLG00000014843) #32	CCDC113 (ENSHGLG00000016049) #33	PRSS54 (ENSHGLG00000012351) #34	ENSHGLG00000044368	ENSHGLG00000033990	ENSHGLG00000011914	ENSHGLG00000011450	GINS3 (ENSHGLG00000041082) #35
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000157894	ENSGT00390000015052.i.b	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554.hb.a #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000157894	ENSGT00390000015052.i.b	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417.m	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554.hb.a #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
Alpin marmot	MODERN SPECIES	23	RSPRY1 (ENSMMMG00000010401)	ENSMMMG00000010394	PLLP (ENSMMMG00000010387)	CCL22 (ENSMMMG00000010378)	ENSMMMG00000010372	CCL17 (ENSMMMG00000010360)	ENSMMMG00000010342	ENSMMMG00000010330	POLR2C (ENSMMMG00000010317)	DOK4 (ENSMMMG00000010285)	CCDC102A (ENSMMMG00000010251)	ADGRG5 (ENSMMMG00000010204)	ENSMMMG00000010194	ADGRG3 (ENSMMMG00000010166) #20	DRC7 (ENSMMMG00000010135) #21	KATNB1 (ENSMMMG00000010088) #22	KIFC3 (ENSMMMG00000009974) #23	ENSMMMG00000009900 #25	TEPP (ENSMMMG00000009853) #27	ZNF319 (ENSMMMG00000009847) #28	USB1 (ENSMMMG00000009833) #29	MMP15 (ENSMMMG00000009783) #30	CFAP20 (ENSMMMG00000009735) #31	CSNK2A2 (ENSMMMG00000009681) #32	CCDC113 (ENSMMMG00000009667) #33	PRSS54 (ENSMMMG00000009656) #34	GINS3 (ENSMMMG00000009647) #35	NDRG4 (ENSMMMG00000009515) #36	SETD6 (ENSMMMG00000009470) #37	CNOT1 (ENSMMMG00000009174)	ENSMMMG00000009163
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000157894	ENSGT00390000015052.i.b	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT01100000263557.A.b.a.a.b	ENSGT00390000011417.m	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554.hb.a #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869	ENSGT00940000158136
Squirrel	MODERN SPECIES	75	RSPRY1 (ENSSTOG00000010241)	ENSSTOG00000010254	PLLP (ENSSTOG00000010257)	CCL22 (ENSSTOG00000010260)	CX3CL1 (ENSSTOG00000015132)	CCL17 (ENSSTOG00000015140)	ENSSTOG00000015141	COQ9 (ENSSTOG00000015145)	ENSSTOG00000015150	DOK4 (ENSSTOG00000023553)	CCDC102A (ENSSTOG00000007357)	ADGRG5 (ENSSTOG00000013311)	ADGRG1 (ENSSTOG00000004173) #19	ADGRG3 (ENSSTOG00000004211) #20	DRC7 (ENSSTOG00000024967) #21	KATNB1 (ENSSTOG00000025980) #22	KIFC3 (ENSSTOG00000007446) #23	ENSSTOG00000007496 #25	Tepp (ENSSTOG00000002105) #27	ZNF319 (ENSSTOG00000019944) #28	USB1 (ENSSTOG00000007548) #29	MMP15 (ENSSTOG00000002405) #30	CFAP20 (ENSSTOG00000003530) #31	CSNK2A2 (ENSSTOG00000003538) #32	CCDC113 (ENSSTOG00000028076) #33	PRSS54 (ENSSTOG00000003562) #34	GINS3 (ENSSTOG00000005709) #35	NDRG4 (ENSSTOG00000005454) #36	SETD6 (ENSSTOG00000005479) #37	CNOT1 (ENSSTOG00000005490)	SLC38A7 (ENSSTOG00000005590)
Arctic ground squirrel	MODERN SPECIES	157	RSPRY1 (ENSUPAG00010012816)	ENSUPAG00010012796	PLLP (ENSUPAG00010012788)	CCL22 (ENSUPAG00010012782)	CX3CL1 (ENSUPAG00010012777)	CCL17 (ENSUPAG00010012771)	CIAPIN1 (ENSUPAG00010012765)	COQ9 (ENSUPAG00010012739)	POLR2C (ENSUPAG00010012727)	DOK4 (ENSUPAG00010012714)	CCDC102A (ENSUPAG00010012704)	ADGRG5 (ENSUPAG00010012679)	ADGRG1 (ENSUPAG00010012319) #19	ADGRG3 (ENSUPAG00010012299) #20	DRC7 (ENSUPAG00010012271) #21	KATNB1 (ENSUPAG00010012233) #22	KIFC3 (ENSUPAG00010012144) #23	ENSUPAG00010012097 #25	TEPP (ENSUPAG00010012012) #27	ZNF319 (ENSUPAG00010012001) #28	USB1 (ENSUPAG00010011975) #29	MMP15 (ENSUPAG00010011967) #30	CFAP20 (ENSUPAG00010011959) #31	CSNK2A2 (ENSUPAG00010011923) #32	CCDC113 (ENSUPAG00010011899) #33	PRSS54 (ENSUPAG00010011878) #34	GINS3 (ENSUPAG00010011871) #35	NDRG4 (ENSUPAG00010011813) #36	SETD6 (ENSUPAG00010011793) #37	CNOT1 (ENSUPAG00010011626)	SLC38A7 (ENSUPAG00010011616)
Eurasian red squirrel	MODERN SPECIES	8	RSPRY1 (ENSSVLG00005022832)	ENSSVLG00005022772	PLLP (ENSSVLG00005022711)	ENSSVLG00005022670	CCL22 (ENSSVLG00005022629)	CX3CL1 (ENSSVLG00005022593)	CCL17 (ENSSVLG00005022562)	CIAPIN1 (ENSSVLG00005022498)	COQ9 (ENSSVLG00005022306)	ENSSVLG00005022201	DOK4 (ENSSVLG00005022133)	CCDC102A (ENSSVLG00005022079)	ADGRG1 (ENSSVLG00005021564) #19	ADGRG3 (ENSSVLG00005021393) #20	DRC7 (ENSSVLG00005021058) #21	KATNB1 (ENSSVLG00005020991) #22	KIFC3 (ENSSVLG00005020657) #23	CNGB1 (ENSSVLG00005020077)	TEPP (ENSSVLG00005019932) #27	ZNF319 (ENSSVLG00005019911) #28	USB1 (ENSSVLG00005019676) #29	MMP15 (ENSSVLG00005019370) #30	ENSSVLG00005019291 #31	ENSSVLG00005019222 #32	ENSSVLG00005019189	CCDC113 (ENSSVLG00005018943) #33	PRSS54 (ENSSVLG00005018883) #34	GINS3 (ENSSVLG00005018840) #35	NDRG4 (ENSSVLG00005018581) #36	SETD6 (ENSSVLG00005018395) #37	CNOT1 (ENSSVLG00005018264)
Lagomorpha	ANCESTRAL SPECIES	48	ENSGT00390000015052.i.a	ENSGT00940000156011	ENSGT01100000263482.A.a.b	ENSGT01100000263557.A.b.a.a.a.b	ENSGT00940000166352	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000160143	ENSGT00730000110960.a.a	ENSGT00940000161359.c	ENSGT00940000161359.d	ENSGT00940000160843 #19	ENSGT00940000154285.b.b #20	ENSGT00390000004913 #21	ENSGT00940000157918 #22	ENSGT00940000154022.a.a #23	ENSGT00940000162283 #25	ENSGT00570000079722 #26	ENSGT00390000013928 #27	ENSGT00940000160309 #28	ENSGT00390000004596 #29	ENSGT00940000156939 #30	ENSGT00390000004554 #31	ENSGT00390000004215.a.b.b.c.a #32	ENSGT00940000154521.B #33	ENSGT01020000230389.a.a.b #34	ENSGT00390000001622 #35	ENSGT00950000182872.f.b.a #36	ENSGT00940000153577.C #37	ENSGT00390000014869
Rabbit	MODERN SPECIES	16	ARL2BP (ENSOCUG00000000582)	PLLP (ENSOCUG00000007353)	CCL22 (ENSOCUG00000015478)	CX3CL1 (ENSOCUG00000007482)	ENSOCUG00000026533	CIAPIN1 (ENSOCUG00000007485)	ENSOCUG00000014974	ENSOCUG00000033612	POLR2C (ENSOCUG00000014984)	DOK4 (ENSOCUG00000026040)	ENSOCUG00000027621	ENSOCUG00000032201	ADGRG1 (ENSOCUG00000007622) #19	ENSOCUG00000016641 #20	DRC7 (ENSOCUG00000016661) #21	KATNB1 (ENSOCUG00000026139) #22	KIFC3 (ENSOCUG00000012069) #23	ENSOCUG00000010540 #25	ENSOCUG00000037145 #26	TEPP (ENSOCUG00000011053) #27	ZNF319 (ENSOCUG00000011058) #28	MMP15 (ENSOCUG00000014015) #30	CFAP20 (ENSOCUG00000014026) #31	CSNK2A2 (ENSOCUG00000005074) #32	CCDC113 (ENSOCUG00000008832) #33	PRSS54 (ENSOCUG00000027370) #34	GINS3 (ENSOCUG00000006054) #35	NDRG4 (ENSOCUG00000022245) #36	SETD6 (ENSOCUG00000006903) #37	CNOT1 (ENSOCUG00000006911)	SLC38A7 (ENSOCUG00000003868)
Pika	MODERN SPECIES	10247																KATNB1 (ENSOPRG00000008235) #22	KIFC3 (ENSOPRG00000008261) #23
Tree shrew	MODERN SPECIES	5268													ENSTBEG00000000249 #19	ADGRG3 (ENSTBEG00000000258) #20	ENSTBEG00000000300 #21	KATNB1 (ENSTBEG00000000329) #22	KIFC3 (ENSTBEG00000000356) #23	ENSTBEG00000000387	ENSTBEG00000000411 #25