Euarchontoglires	ANCESTRAL SPECIES		ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Primates	ANCESTRAL SPECIES	4	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00390000006264	ENSGT00390000012569.a.fb.b.b.a ##8	ENSGT00390000012569.a.fb.b.a ##8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00390000012569.a.fb.b.a ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00390000001447.q	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000012569.a.fb.b.b.a.a ##8	ENSGT00390000012569.a.fb.b.b.a.b ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00390000006264.j	ENSGT00390000012569.a.fb.b.b.a.a ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000006264.j	ENSGT00390000012569.a.fb.b.b.a.b ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00390000012569.a.fb.b.b.a.a ##8	ENSGT00390000012569.a.fb.b.b.a.b ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00390000006264.j	ENSGT00390000012569.a.fb.b.b.a.b ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Drill	MODERN SPECIES	832	ENSMLEG00000027639 #7	ENSMLEG00000003164 #8	PTAFR (ENSMLEG00000000550) #9	ENSMLEG00000033540 #10	EYA3 (ENSMLEG00000042664) #11	XKR8 (ENSMLEG00000043403) #12	SMPDL3B (ENSMLEG00000039800) #13	RPA2 (ENSMLEG00000031567) #14	THEMIS2 (ENSMLEG00000040682) #15	PPP1R8 (ENSMLEG00000041495) #16	STX12 (ENSMLEG00000038548) #17	FAM76A (ENSMLEG00000033923) #18	IFI6 (ENSMLEG00000037855) #19	FGR (ENSMLEG00000032617) #20	AHDC1 (ENSMLEG00000027938) #21	WASF2 (ENSMLEG00000041634) #22	GPR3 (ENSMLEG00000027688) #23	CD164L2 (ENSMLEG00000038397) #24	FCN3 (ENSMLEG00000017979) #25	MAP3K6 (ENSMLEG00000041031) #26	SYTL1 (ENSMLEG00000044240) #27	TMEM222 (ENSMLEG00000031793) #28	WDTC1 (ENSMLEG00000028076) #29	SLC9A1 (ENSMLEG00000014293) #30	TENT5B (ENSMLEG00000042465) #31	ENSMLEG00000026434 #32	KDF1 (ENSMLEG00000041584) #33	NUDC (ENSMLEG00000036923) #34	NR0B2 (ENSMLEG00000030851) #35	GPATCH3 (ENSMLEG00000033364) #36	GPN2 (ENSMLEG00000025975) #37
Sooty mangabey	MODERN SPECIES	227	ENSCATG00000033266 ##8	PTAFR (ENSCATG00000005828) #9	ENSCATG00000017621 #10	EYA3 (ENSCATG00000027843) #11	XKR8 (ENSCATG00000015702) #12	SMPDL3B (ENSCATG00000017005) #13	RPA2 (ENSCATG00000044566) #14	THEMIS2 (ENSCATG00000031969) #15	PPP1R8 (ENSCATG00000032635) #16	STX12 (ENSCATG00000032583) #17	FAM76A (ENSCATG00000033886) #18	ENSCATG00000033546	IFI6 (ENSCATG00000016831) #19	FGR (ENSCATG00000044439) #20	AHDC1 (ENSCATG00000004004) #21	WASF2 (ENSCATG00000027046) #22	GPR3 (ENSCATG00000006977) #23	CD164L2 (ENSCATG00000044159) #24	FCN3 (ENSCATG00000020495) #25	MAP3K6 (ENSCATG00000025890) #26	SYTL1 (ENSCATG00000044339) #27	TMEM222 (ENSCATG00000044475) #28	WDTC1 (ENSCATG00000044454) #29	ENSCATG00000033551	SLC9A1 (ENSCATG00000033651) #30	TENT5B (ENSCATG00000017109) #31	TRNP1 (ENSCATG00000004345)	KDF1 (ENSCATG00000015571) #33	NR0B2 (ENSCATG00000044469) #35	GPATCH3 (ENSCATG00000033598) #36	GPN2 (ENSCATG00000033688) #37
Olive baboon	MODERN SPECIES		ATP5IF1 (ENSPANG00000018327)	ENSPANG00000012833 ##8	PTAFR (ENSPANG00000006117) #9	ENSPANG00000042576	EYA3 (ENSPANG00000016511) #11	XKR8 (ENSPANG00000007916) #12	SMPDL3B (ENSPANG00000007129) #13	RPA2 (ENSPANG00000017991) #14	THEMIS2 (ENSPANG00000005205) #15	PPP1R8 (ENSPANG00000043070) #16	STX12 (ENSPANG00000007130) #17	FAM76A (ENSPANG00000000247) #18	IFI6 (ENSPANG00000000246) #19	FGR (ENSPANG00000016682) #20	AHDC1 (ENSPANG00000006132) #21	WASF2 (ENSPANG00000013871) #22	GPR3 (ENSPANG00000001840) #23	CD164L2 (ENSPANG00000017456) #24	FCN3 (ENSPANG00000012868) #25	MAP3K6 (ENSPANG00000006133) #26	SYTL1 (ENSPANG00000005720) #27	TMEM222 (ENSPANG00000018881) #28	WDTC1 (ENSPANG00000008666) #29	ENSPANG00000034989	ENSPANG00000042373 ##7	TENT5B (ENSPANG00000007821) #31	TRNP1 (ENSPANG00000018909)	ENSPANG00000005605 #32	KDF1 (ENSPANG00000023562) #33	NUDC (ENSPANG00000019007) #34	NR0B2 (ENSPANG00000002391) #35
Macaca	ANCESTRAL SPECIES		ENSGT00390000006264.i.a	ENSGT00390000012569.a.fb.b.b.a.a ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Pig-tailed macaque	MODERN SPECIES	217	ATP5IF1 (ENSMNEG00000020230)	ENSMNEG00000011552 ##8	PTAFR (ENSMNEG00000023879) #9	ENSMNEG00000043243 #10	EYA3 (ENSMNEG00000030436) #11	XKR8 (ENSMNEG00000037672) #12	SMPDL3B (ENSMNEG00000040406) #13	RPA2 (ENSMNEG00000032153) #14	THEMIS2 (ENSMNEG00000036095) #15	PPP1R8 (ENSMNEG00000030784) #16	STX12 (ENSMNEG00000005186) #17	ENSMNEG00000041438	FAM76A (ENSMNEG00000027606) #18	IFI6 (ENSMNEG00000029593) #19	FGR (ENSMNEG00000043664) #20	WASF2 (ENSMNEG00000033479) #22	GPR3 (ENSMNEG00000019217) #23	CD164L2 (ENSMNEG00000040766) #24	FCN3 (ENSMNEG00000038862) #25	MAP3K6 (ENSMNEG00000028644) #26	SYTL1 (ENSMNEG00000038366) #27	TMEM222 (ENSMNEG00000038995) #28	WDTC1 (ENSMNEG00000041566) #29	SLC9A1 (ENSMNEG00000010902) #30	TENT5B (ENSMNEG00000042604) #31	TRNP1 (ENSMNEG00000003839)	KDF1 (ENSMNEG00000042498) #33	NUDC (ENSMNEG00000030640) #34	NR0B2 (ENSMNEG00000040399) #35	GPATCH3 (ENSMNEG00000033889) #36	GPN2 (ENSMNEG00000041201) #37
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000183168.B.a	ENSGT00390000006264.i.a	ENSGT00390000012569.a.fb.b.b.a.a ##8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Crab-eating macaque	MODERN SPECIES		ATP5IF1 (ENSMFAG00000037657)	ENSMFAG00000040941	PTAFR (ENSMFAG00000063827) #9	EYA3 (ENSMFAG00000045224) #11	STX12 (ENSMFAG00000003645) #17	XKR8 (ENSMFAG00000037317) #12	SMPDL3B (ENSMFAG00000044059) #13	RPA2 (ENSMFAG00000022522) #14	THEMIS2 (ENSMFAG00000030730) #15	PPP1R8 (ENSMFAG00000001557) #16	FAM76A (ENSMFAG00000051312) #18	IFI6 (ENSMFAG00000034666) #19	ENSMFAG00000049622	FGR (ENSMFAG00000037860) #20	AHDC1 (ENSMFAG00000004617) #21	WASF2 (ENSMFAG00000001141) #22	GPR3 (ENSMFAG00000026566) #23	CD164L2 (ENSMFAG00000032742) #24	FCN3 (ENSMFAG00000000683) #25	MAP3K6 (ENSMFAG00000039505) #26	SYTL1 (ENSMFAG00000002518) #27	TMEM222 (ENSMFAG00000003393) #28	WDTC1 (ENSMFAG00000040733) #29	ENSMFAG00000047298	ENSMFAG00000037876 #30	TENT5B (ENSMFAG00000003756) #31	KDF1 (ENSMFAG00000042338) #33	NUDC (ENSMFAG00000035581) #34	NR0B2 (ENSMFAG00000042880) #35	GPATCH3 (ENSMFAG00000030918) #36	GPN2 (ENSMFAG00000036999) #37
Rhesus	MODERN SPECIES		DNAJC8 (ENSMMUG00000017080) ##8	PTAFR (ENSMMUG00000063261) #9	ENSMMUG00000060250	EYA3 (ENSMMUG00000012965) #11	XKR8 (ENSMMUG00000054886) #12	ENSMMUG00000018175 #13	RPA2 (ENSMMUG00000018172) #14	THEMIS2 (ENSMMUG00000018170) #15	ENSMMUG00000056206	STX12 (ENSMMUG00000012252) #16	ENSMMUG00000057915	FAM76A (ENSMMUG00000012243) #18	IFI6 (ENSMMUG00000011454) #19	FGR (ENSMMUG00000014434) #20	AHDC1 (ENSMMUG00000009868) #21	WASF2 (ENSMMUG00000018221) #22	GPR3 (ENSMMUG00000018325) #23	FCN3 (ENSMMUG00000018322) #25	MAP3K6 (ENSMMUG00000018318) #26	SYTL1 (ENSMMUG00000004768) #27	TMEM222 (ENSMMUG00000004767) #28	WDTC1 (ENSMMUG00000004762) #29	ENSMMUG00000049904	SLC9A1 (ENSMMUG00000016893) #30	TENT5B (ENSMMUG00000015115) #31	TRNP1 (ENSMMUG00000021031)	NUDC (ENSMMUG00000010290) #34	KDF1 (ENSMMUG00000002555) #33	NR0B2 (ENSMMUG00000010291) #35	GPATCH3 (ENSMMUG00000018723) #36	GPN2 (ENSMMUG00000018721) #37
Vervet Monkey	MODERN SPECIES	12	SESN2 (ENSCSAG00000001009)	ENSCSAG00000001008	ENSCSAG00000001007 ##8	ENSCSAG00000000654 ##7	PTAFR (ENSCSAG00000000653) #9	EYA3 (ENSCSAG00000001006) #11	XKR8 (ENSCSAG00000001005) #12	RPA2 (ENSCSAG00000001004) #14	THEMIS2 (ENSCSAG00000001003) #15	PPP1R8 (ENSCSAG00000001002) #16	STX12 (ENSCSAG00000001000) #17	FAM76A (ENSCSAG00000000999) #18	IFI6 (ENSCSAG00000000997) #19	FGR (ENSCSAG00000000996) #20	AHDC1 (ENSCSAG00000000652) #21	WASF2 (ENSCSAG00000000995) #22	GPR3 (ENSCSAG00000000651) #23	CD164L2 (ENSCSAG00000000994) #24	FCN3 (ENSCSAG00000000993) #25	MAP3K6 (ENSCSAG00000000992) #26	SYTL1 (ENSCSAG00000000991) #27	TMEM222 (ENSCSAG00000000990) #28	WDTC1 (ENSCSAG00000000989) #29	SLC9A1 (ENSCSAG00000000988) #30	TENT5B (ENSCSAG00000000987) #31	TRNP1 (ENSCSAG00000000650)	KDF1 (ENSCSAG00000000986) #33	NUDC (ENSCSAG00000000985) #34	NR0B2 (ENSCSAG00000000984) #35	GPATCH3 (ENSCSAG00000000983) #36	GPN2 (ENSCSAG00000000982) #37
Rhinopithecus	ANCESTRAL SPECIES	82	ENSGT00390000006264	ENSGT00390000012569.a.fb.b.b.a.a ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000155479	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361.d #34	ENSGT00390000015719.c #35
Black snub-nosed monkey	MODERN SPECIES	1846	ATP5IF1 (ENSRBIG00000044587)	ENSRBIG00000035627 ##8	ENSRBIG00000003411 #7	ENSRBIG00000036065 #10	EYA3 (ENSRBIG00000038991) #11	XKR8 (ENSRBIG00000041388) #12	SMPDL3B (ENSRBIG00000039924) #13	RPA2 (ENSRBIG00000036230) #14	THEMIS2 (ENSRBIG00000012387) #15	PPP1R8 (ENSRBIG00000012191) #16	STX12 (ENSRBIG00000036484) #17	FAM76A (ENSRBIG00000031849) #18	IFI6 (ENSRBIG00000020079) #19	FGR (ENSRBIG00000039817) #20	AHDC1 (ENSRBIG00000014826) #21	WASF2 (ENSRBIG00000042169) #22	GPR3 (ENSRBIG00000014455) #23	CD164L2 (ENSRBIG00000034769) #24	FCN3 (ENSRBIG00000042599) #25	ENSRBIG00000037465 #26	SYTL1 (ENSRBIG00000029326) #27	TMEM222 (ENSRBIG00000043541) #28	WDTC1 (ENSRBIG00000040615) #29	SLC9A1 (ENSRBIG00000022222) #30	ENSRBIG00000014897	TENT5B (ENSRBIG00000033865) #31	TRNP1 (ENSRBIG00000032398)	ENSRBIG00000014734 #32	KDF1 (ENSRBIG00000027752) #33	NUDC (ENSRBIG00000018562) #34	NR0B2 (ENSRBIG00000037548) #35
Golden snub-nosed monkey	MODERN SPECIES	2213	ATP5IF1 (ENSRROG00000036303)	ENSRROG00000045532 ##8	ENSRROG00000013306 #7	PTAFR (ENSRROG00000003323) #9	ENSRROG00000030937 #10	EYA3 (ENSRROG00000036974) #11	XKR8 (ENSRROG00000034100) #12	SMPDL3B (ENSRROG00000035411) #13	RPA2 (ENSRROG00000040865) #14	THEMIS2 (ENSRROG00000024691) #15	PPP1R8 (ENSRROG00000041525) #16	STX12 (ENSRROG00000031145) #17	FAM76A (ENSRROG00000033795) #18	IFI6 (ENSRROG00000027931) #19	FGR (ENSRROG00000040142) #20	WASF2 (ENSRROG00000012791) #22	GPR3 (ENSRROG00000016304) #23	CD164L2 (ENSRROG00000033312) #24	FCN3 (ENSRROG00000033384) #25	MAP3K6 (ENSRROG00000031761) #26	SYTL1 (ENSRROG00000037744) #27	TMEM222 (ENSRROG00000032428) #28	WDTC1 (ENSRROG00000039571) #29	SLC9A1 (ENSRROG00000035382) #30	ENSRROG00000030078	TENT5B (ENSRROG00000045423) #31	ENSRROG00000045205 #32	KDF1 (ENSRROG00000042590) #33	NUDC (ENSRROG00000037321) #34	NR0B2 (ENSRROG00000042749) #35	GPATCH3 (ENSRROG00000038382) #36
Hominoidea	DUPLICATION
Hominoidea	ANCESTRAL SPECIES	75															ENSGT00870000136506.ob.a.a	ENSGT00950000182962.b.a.g #22	ENSGT00910000147902
Hominidae	ANCESTRAL SPECIES	72															ENSGT00870000136506.ob.a.a	ENSGT00950000182962.b.a.g #22	ENSGT00910000147902
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00390000001278.b.a.b	ENSGT00940000160369	ENSGT00940000158975	ENSGT00940000156963.a.b	ENSGT00940000160485	ENSGT00390000001505.a.a	ENSGT00940000162890	ENSGT00940000163107	ENSGT00940000159633	ENSGT00940000161978	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00870000136506.ob.a.a	ENSGT00950000182962.b.a.g #22	ENSGT00910000147902	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484.f.a.b.b.b	ENSGT00630000089895.x	ENSGT00390000012484.f.a.b.b.a.b.b.a	ENSGT00940000161233	ENSGT00730000111146	ENSGT01030000234564.a.a.b.a	ENSGT00530000063715.a	ENSGT00940000159173	ENSGT00940000153524.b.a.a	ENSGT00940000153634.a	ENSGT00730000110895.b.b
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00390000001278.b.a.b	ENSGT00940000160369	ENSGT00940000158975	ENSGT00940000156963.a.b	ENSGT00940000160485	ENSGT00390000001505.a.a	ENSGT00940000162890	ENSGT00940000163107	ENSGT00940000159633	ENSGT00940000161978	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00870000136506.ob.a.a	ENSGT00950000182962.b.a.g #22	ENSGT00910000147902	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484.e.a.b	ENSGT00390000012484.f.a.b.b.a.b.a	ENSGT00390000012484.f.a.b.b.a.a.a.b.a	ENSGT00390000012484.f.a.b.b.a.b.b.a	ENSGT00630000089895.x	ENSGT00940000161233	ENSGT00730000111146	ENSGT01030000234564.a.a.b.a	ENSGT00530000063715.a	ENSGT00940000159173
Pan	ANCESTRAL SPECIES	6	ENSGT00390000001278.b.a.b	ENSGT00940000160369	ENSGT00940000158975	ENSGT00940000156963.a.b	ENSGT00940000160485	ENSGT00390000001505.a.a	ENSGT00940000162890	ENSGT00940000163107	ENSGT00940000159633	ENSGT00940000161978	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00870000136506.ob.a.a	ENSGT00950000182962.b.a.g #22	ENSGT00910000147902	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484.e.a.b	ENSGT00390000012484.f.a.b.b.a.b.a	ENSGT00390000012484.f.a.b.b.a.a.a.b.a	ENSGT00390000012484.f.a.b.b.a.b.b.a	ENSGT00630000089895.x	ENSGT00940000161233	ENSGT00730000111146	ENSGT01030000234564.a.a.b.a	ENSGT00530000063715.a	ENSGT00940000159173
Bonobo	MODERN SPECIES	369	RBM10 (ENSPPAG00000040583)	ENSPPAG00000034605	UBA1 (ENSPPAG00000039495)	CDK16 (ENSPPAG00000031958)	USP11 (ENSPPAG00000033692)	ENSPPAG00000036049	ZNF157 (ENSPPAG00000042083)	ZNF41 (ENSPPAG00000035075)	ARAF (ENSPPAG00000015632)	ENSPPAG00000028720	TIMP1 (ENSPPAG00000029120)	CFP (ENSPPAG00000039755)	ELK1 (ENSPPAG00000043075)	UXT (ENSPPAG00000029051)	ENSPPAG00000033508	ENSPPAG00000035272 #22	ENSPPAG00000025952	ZNF81 (ENSPPAG00000027628)	ZNF630 (ENSPPAG00000036338)	ENSPPAG00000037481	ENSPPAG00000029279	ENSPPAG00000034188	ENSPPAG00000035462	SSX3 (ENSPPAG00000043286)	ENSPPAG00000030049	SLC38A5 (ENSPPAG00000037376)	FTSJ1 (ENSPPAG00000028540)	PORCN (ENSPPAG00000032866)	ENSPPAG00000041670	TBC1D25 (ENSPPAG00000038374)	RBM3 (ENSPPAG00000034179)
Chimpanzee	MODERN SPECIES	972	RBM10 (ENSPTRG00000021837)	ENSPTRG00000047195	UBA1 (ENSPTRG00000051849)	CDK16 (ENSPTRG00000021840)	USP11 (ENSPTRG00000047301)	ENSPTRG00000042709	ZNF157 (ENSPTRG00000021842)	ZNF41 (ENSPTRG00000021843)	ARAF (ENSPTRG00000021846)	SYN1 (ENSPTRG00000043680)	ENSPTRG00000044804	CFP (ENSPTRG00000021849)	ELK1 (ENSPTRG00000021850)	UXT (ENSPTRG00000021851)	ENSPTRG00000047992	ENSPTRG00000000408 #22	ENSPTRG00000051718	ZNF81 (ENSPTRG00000023331)	ZNF182 (ENSPTRG00000028288)	ENSPTRG00000021853	ENSPTRG00000041924	ENSPTRG00000021919	ENSPTRG00000021921	ENSPTRG00000042703	ENSPTRG00000051358	ENSPTRG00000023969	ENSPTRG00000049383	SLC38A5 (ENSPTRG00000021860)	FTSJ1 (ENSPTRG00000049433)	PORCN (ENSPTRG00000047836)	EBP (ENSPTRG00000044865)
Gibbon	MODERN SPECIES	449	NDUFB11 (ENSNLEG00000003004)	RBM10 (ENSNLEG00000003018)	UBA1 (ENSNLEG00000003096)	CDK16 (ENSNLEG00000003184)	USP11 (ENSNLEG00000003207)	ENSNLEG00000031525	ZNF157 (ENSNLEG00000003324)	ZNF41 (ENSNLEG00000003328)	ENSNLEG00000036307	ENSNLEG00000003363	SYN1 (ENSNLEG00000026808)	CFP (ENSNLEG00000003373)	ELK1 (ENSNLEG00000003420)	UXT (ENSNLEG00000028907)	ENSNLEG00000030427	ENSNLEG00000003477 #22	ENSNLEG00000035243	ENSNLEG00000028377	ZNF81 (ENSNLEG00000003479)	ZNF182 (ENSNLEG00000003482)	ENSNLEG00000003487	ZNF630 (ENSNLEG00000003503)	ENSNLEG00000032650	ENSNLEG00000003612	ENSNLEG00000003614	ENSNLEG00000028121	ENSNLEG00000036118	ENSNLEG00000032683	FTSJ1 (ENSNLEG00000007816)	PORCN (ENSNLEG00000007822)	EBP (ENSNLEG00000007836)
Hominoidea	ANCESTRAL SPECIES	3	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00550000076274	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00390000001447.q	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a.h #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000012569.a.fb.b.a.a ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00550000076274	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a.h #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000012569.a.fb.b.a.a ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00550000076274	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a.h #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000012569.a.fb.b.a.a ##8	ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00550000076274	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a.h #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Pan	ANCESTRAL SPECIES		ENSGT01060000248589.D #9	ENSGT00940000154861.d #10	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b #14	ENSGT00530000063770.c.a #15	ENSGT00550000076274	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00390000003710.d.c.a	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a.h #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00390000012818.o.a.b	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.c	ENSGT00390000000903.a.f.a	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000001376.bb.a.a #32	ENSGT00390000016565 #33
Chimpanzee	MODERN SPECIES		PTAFR (ENSPTRG00000000424) #9	ENSPTRG00000044631 #10	EYA3 (ENSPTRG00000000423) #11	XKR8 (ENSPTRG00000000422) #12	SMPDL3B (ENSPTRG00000000421) #13	RPA2 (ENSPTRG00000000420) #14	THEMIS2 (ENSPTRG00000000419) #15	ENSPTRG00000052043	PPP1R8 (ENSPTRG00000000417) #16	STX12 (ENSPTRG00000000416) #17	FAM76A (ENSPTRG00000000414) #18	IFI6 (ENSPTRG00000000413) #19	ENSPTRG00000040060	FGR (ENSPTRG00000000411) #20	AHDC1 (ENSPTRG00000000410) #21	WASF2 (ENSPTRG00000000409) #22	GPR3 (ENSPTRG00000044871) #23	CD164L2 (ENSPTRG00000000406) #24	FCN3 (ENSPTRG00000000405) #25	MAP3K6 (ENSPTRG00000000404) #26	SYTL1 (ENSPTRG00000000403) #27	TMEM222 (ENSPTRG00000000402) #28	WDTC1 (ENSPTRG00000000401) #29	ENSPTRG00000044112	ENSPTRG00000052422	ENSPTRG00000042092	SLC9A1 (ENSPTRG00000051037) #30	TENT5B (ENSPTRG00000000397) #31	TRNP1 (ENSPTRG00000046384)	ENSPTRG00000044717 #32	KDF1 (ENSPTRG00000000396) #33
Bonobo	MODERN SPECIES		DNAJC8 (ENSPPAG00000032103) ##8	PTAFR (ENSPPAG00000024566) #9	ENSPPAG00000041305 #10	EYA3 (ENSPPAG00000038235) #11	XKR8 (ENSPPAG00000032312) #12	SMPDL3B (ENSPPAG00000033356) #13	RPA2 (ENSPPAG00000021088) #14	THEMIS2 (ENSPPAG00000031100) #15	ENSPPAG00000004249	PPP1R8 (ENSPPAG00000036845) #16	STX12 (ENSPPAG00000041257) #17	FAM76A (ENSPPAG00000033431) #18	IFI6 (ENSPPAG00000031946) #19	ENSPPAG00000005765	FGR (ENSPPAG00000029323) #20	WASF2 (ENSPPAG00000041993) #22	GPR3 (ENSPPAG00000016740) #23	CD164L2 (ENSPPAG00000031928) #24	FCN3 (ENSPPAG00000038009) #25	MAP3K6 (ENSPPAG00000040813) #26	SYTL1 (ENSPPAG00000011464) #27	TMEM222 (ENSPPAG00000027696) #28	WDTC1 (ENSPPAG00000030849) #29	ENSPPAG00000040781	ENSPPAG00000027951	ENSPPAG00000031182	SLC9A1 (ENSPPAG00000043811) #30	TENT5B (ENSPPAG00000035934) #31	ENSPPAG00000041792 #32	KDF1 (ENSPPAG00000030084) #33	NUDC (ENSPPAG00000000217) #34
Human	MODERN SPECIES		SESN2 (ENSG00000130766)	ATP5IF1 (ENSG00000130770)	DNAJC8 (ENSG00000126698) ##8	PTAFR (ENSG00000169403) #9	EYA3 (ENSG00000158161) #11	XKR8 (ENSG00000158156) #12	SMPDL3B (ENSG00000130768) #13	RPA2 (ENSG00000117748) #14	THEMIS2 (ENSG00000130775) #15	PPP1R8 (ENSG00000117751) #16	STX12 (ENSG00000117758) #17	FAM76A (ENSG00000009780) #18	IFI6 (ENSG00000126709) #19	FGR (ENSG00000000938) #20	AHDC1 (ENSG00000126705) #21	WASF2 (ENSG00000158195) #22	GPR3 (ENSG00000181773) #23	CD164L2 (ENSG00000174950) #24	FCN3 (ENSG00000142748) #25	MAP3K6 (ENSG00000142733) #26	SYTL1 (ENSG00000142765) #27	TMEM222 (ENSG00000186501) #28	WDTC1 (ENSG00000142784) #29	SLC9A1 (ENSG00000090020) #30	TENT5B (ENSG00000158246) #31	TRNP1 (ENSG00000253368)	KDF1 (ENSG00000175707) #33	NR0B2 (ENSG00000131910) #35	NUDC (ENSG00000090273) #34	GPATCH3 (ENSG00000198746) #36	GPN2 (ENSG00000142751) #37
Gorilla	MODERN SPECIES		ENSGGOG00000043416 #10	ENSGGOG00000023525	EYA3 (ENSGGOG00000008544) #11	XKR8 (ENSGGOG00000014917) #12	SMPDL3B (ENSGGOG00000014912) #13	RPA2 (ENSGGOG00000015287) #14	THEMIS2 (ENSGGOG00000009217) #15	ENSGGOG00000040440	ENSGGOG00000043200	PPP1R8 (ENSGGOG00000012062) #16	STX12 (ENSGGOG00000001668) #17	FAM76A (ENSGGOG00000006690) #18	IFI6 (ENSGGOG00000000776) #19	FGR (ENSGGOG00000000775) #20	AHDC1 (ENSGGOG00000014466) #21	WASF2 (ENSGGOG00000004436) #22	GPR3 (ENSGGOG00000041212) #23	CD164L2 (ENSGGOG00000025436) #24	FCN3 (ENSGGOG00000000047) #25	MAP3K6 (ENSGGOG00000000045) #26	SYTL1 (ENSGGOG00000000043) #27	TMEM222 (ENSGGOG00000000040) #28	WDTC1 (ENSGGOG00000012009) #29	ENSGGOG00000000755	ENSGGOG00000022556	ENSGGOG00000040604	ENSGGOG00000043274	SLC9A1 (ENSGGOG00000001596) #30	TENT5B (ENSGGOG00000008075) #31	ENSGGOG00000042470 #32	KDF1 (ENSGGOG00000023640) #33
Orangutan	MODERN SPECIES		SESN2 (ENSPPYG00000001643)	ATP5IF1 (ENSPPYG00000001644)	ENSPPYG00000025833 ##8	PTAFR (ENSPPYG00000001647) #9	EYA3 (ENSPPYG00000001648) #11	XKR8 (ENSPPYG00000039433) #12	SMPDL3B (ENSPPYG00000001650) #13	RPA2 (ENSPPYG00000001651) #14	THEMIS2 (ENSPPYG00000001652) #15	PPP1R8 (ENSPPYG00000001654) #16	ENSPPYG00000001653	STX12 (ENSPPYG00000001655) #17	FAM76A (ENSPPYG00000001656) #18	IFI6 (ENSPPYG00000001658) #19	FGR (ENSPPYG00000001659) #20	WASF2 (ENSPPYG00000001661) #22	GPR3 (ENSPPYG00000001662) #23	CD164L2 (ENSPPYG00000001663) #24	FCN3 (ENSPPYG00000001664) #25	MAP3K6 (ENSPPYG00000001665) #26	SYTL1 (ENSPPYG00000001666) #27	TMEM222 (ENSPPYG00000001667) #28	WDTC1 (ENSPPYG00000001668) #29	ENSPPYG00000017919	SLC9A1 (ENSPPYG00000001669) #30	ENSPPYG00000033121	TENT5B (ENSPPYG00000038825) #31	TRNP1 (ENSPPYG00000036663)	KDF1 (ENSPPYG00000001672) #33	NUDC (ENSPPYG00000001673) #34	NR0B2 (ENSPPYG00000001674) #35
Gibbon	MODERN SPECIES	16	DNAJC8 (ENSNLEG00000009762) ##8	PTAFR (ENSNLEG00000009760) #9	EYA3 (ENSNLEG00000009724) #11	XKR8 (ENSNLEG00000009722) #12	SMPDL3B (ENSNLEG00000009709) #13	RPA2 (ENSNLEG00000009702) #14	ENSNLEG00000009697 #15	ENSNLEG00000009695	PPP1R8 (ENSNLEG00000009676) #16	STX12 (ENSNLEG00000030651) #17	ENSNLEG00000029142	FAM76A (ENSNLEG00000027579) #18	IFI6 (ENSNLEG00000009659) #19	ENSNLEG00000009650 #20	AHDC1 (ENSNLEG00000034636) #21	ENSNLEG00000009635 #22	GPR3 (ENSNLEG00000028413) #23	CD164L2 (ENSNLEG00000009625) #24	FCN3 (ENSNLEG00000009613) #25	MAP3K6 (ENSNLEG00000009550) #26	SYTL1 (ENSNLEG00000009521) #27	TMEM222 (ENSNLEG00000009516) #28	WDTC1 (ENSNLEG00000009495) #29	ENSNLEG00000035618	SLC9A1 (ENSNLEG00000009434) #30	TENT5B (ENSNLEG00000009432) #31	NUDC (ENSNLEG00000009404) #34	NR0B2 (ENSNLEG00000009403) #35	GPATCH3 (ENSNLEG00000009387) #36	GPN2 (ENSNLEG00000009383) #37	SFN (ENSNLEG00000018582)
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000006264	ENSGT00390000012569.a.fb.a.b.a ##8	ENSGT00390000015229.p	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b.a #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000006264	ENSGT00390000012569.a.fb.a.b.a ##8	ENSGT00390000015229.p	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b.a #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Cebidae_a	ANCESTRAL SPECIES		ENSGT00390000006264	ENSGT00390000012569.a.fb.a.b.a ##8	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.b ##8	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045.g.b.a #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37	ENSGT01090000260040.b.b.b.a
Capuchin	MODERN SPECIES	87	DNAJC8 (ENSCCAG00000026898) ##8	ENSCCAG00000027313	EYA3 (ENSCCAG00000024843) #11	XKR8 (ENSCCAG00000033700) #12	SMPDL3B (ENSCCAG00000023858) #13	RPA2 (ENSCCAG00000025366) ##14	THEMIS2 (ENSCCAG00000035270) #15	PPP1R8 (ENSCCAG00000025347) #16	STX12 (ENSCCAG00000023253) #17	ENSCCAG00000031655	FAM76A (ENSCCAG00000032340) #18	IFI6 (ENSCCAG00000033587) #19	FGR (ENSCCAG00000026723) #20	AHDC1 (ENSCCAG00000019652) #21	ENSCCAG00000019701	WASF2 (ENSCCAG00000033324) #22	GPR3 (ENSCCAG00000000295) #23	CD164L2 (ENSCCAG00000023007) #24	FCN3 (ENSCCAG00000022265) #25	MAP3K6 (ENSCCAG00000019188) #26	SYTL1 (ENSCCAG00000024708) #27	WDTC1 (ENSCCAG00000026157) #29	SLC9A1 (ENSCCAG00000026782) #30	TENT5B (ENSCCAG00000036493) #31	ENSCCAG00000028136 ##32	ENSCCAG00000020074	KDF1 (ENSCCAG00000015434) #33	NUDC (ENSCCAG00000033425) #34	NR0B2 (ENSCCAG00000030627) #35	GPATCH3 (ENSCCAG00000030482) #36	GPN2 (ENSCCAG00000027501) #37
Bolivian squirrel monkey	MODERN SPECIES	44									PPP1R8 (ENSSBOG00000032910) #16	STX12 (ENSSBOG00000014436) #17	FAM76A (ENSSBOG00000026158) #18	IFI6 (ENSSBOG00000034960) #19	FGR (ENSSBOG00000033596) #20	AHDC1 (ENSSBOG00000026685) #21	ENSSBOG00000002550	WASF2 (ENSSBOG00000022556) #22	GPR3 (ENSSBOG00000015463) #23	CD164L2 (ENSSBOG00000016074) #24	FCN3 (ENSSBOG00000035705) #25	MAP3K6 (ENSSBOG00000022232) #26	SYTL1 (ENSSBOG00000022361) #27	TMEM222 (ENSSBOG00000031879) #28	WDTC1 (ENSSBOG00000024363) #29	ENSSBOG00000026222	SLC9A1 (ENSSBOG00000034296) #30	TENT5B (ENSSBOG00000023376) #31	KDF1 (ENSSBOG00000022048) #33	NUDC (ENSSBOG00000035376) #34	NR0B2 (ENSSBOG00000026068) #35	GPATCH3 (ENSSBOG00000019680) #36	GPN2 (ENSSBOG00000031587) #37
Marmoset	MODERN SPECIES	19	ATP5IF1 (ENSCJAG00000048007)	ENSCJAG00000009556 ##8	PTAFR (ENSCJAG00000022642) #9	EYA3 (ENSCJAG00000009498) #11	XKR8 (ENSCJAG00000009496) #12	SMPDL3B (ENSCJAG00000009490) #13	RPA2 (ENSCJAG00000009473) #14	ENSCJAG00000009445 #15	PPP1R8 (ENSCJAG00000009406) #16	STX12 (ENSCJAG00000009378) #17	ENSCJAG00000077742	FAM76A (ENSCJAG00000009327) #18	IFI6 (ENSCJAG00000009319) #19	FGR (ENSCJAG00000009293) #20	AHDC1 (ENSCJAG00000009280) #21	WASF2 (ENSCJAG00000009264) #22	GPR3 (ENSCJAG00000009260) #23	CD164L2 (ENSCJAG00000009245) #24	FCN3 (ENSCJAG00000009233) #25	MAP3K6 (ENSCJAG00000009171) #26	SYTL1 (ENSCJAG00000009140) #27	TMEM222 (ENSCJAG00000009112) #28	WDTC1 (ENSCJAG00000009088) #29	SLC9A1 (ENSCJAG00000009011) #30	ENSCJAG00000072688	ENSCJAG00000083746	TENT5B (ENSCJAG00000060780) #31	TRNP1 (ENSCJAG00000046636)	KDF1 (ENSCJAG00000010076) #33	NUDC (ENSCJAG00000010033) #34	NR0B2 (ENSCJAG00000010029) #35
Mas night monkey	MODERN SPECIES	1281	SESN2 (ENSANAG00000029947)	ATP5IF1 (ENSANAG00000029390)	ENSANAG00000033952 ##8	ENSANAG00000032813	EYA3 (ENSANAG00000024390) #11	XKR8 (ENSANAG00000020923) #12	SMPDL3B (ENSANAG00000029765) #13	ENSANAG00000033411	THEMIS2 (ENSANAG00000032929) #15	PPP1R8 (ENSANAG00000011047) #16	STX12 (ENSANAG00000034764) #17	FAM76A (ENSANAG00000034741) #18	IFI6 (ENSANAG00000034223) #19	FGR (ENSANAG00000033090) #20	AHDC1 (ENSANAG00000026196) #21	WASF2 (ENSANAG00000029609) #22	GPR3 (ENSANAG00000016515) #23	CD164L2 (ENSANAG00000024020) #24	FCN3 (ENSANAG00000030001) #25	MAP3K6 (ENSANAG00000027054) #26	SYTL1 (ENSANAG00000028160) #27	TMEM222 (ENSANAG00000029313) #28	ENSANAG00000023312	WDTC1 (ENSANAG00000025177) #29	SLC9A1 (ENSANAG00000028650) #30	ENSANAG00000016046	TENT5B (ENSANAG00000028081) #31	TRNP1 (ENSANAG00000032266)	ENSANAG00000021922 ##32	KDF1 (ENSANAG00000027498) #33	NUDC (ENSANAG00000028557) #34
Tarsier	MODERN SPECIES	4840						SLC4A4 (ENSTSYG00000001802)	ENSTSYG00000026757	RPA2 (ENSTSYG00000010706) #14	THEMIS2 (ENSTSYG00000031992) #15	PPP1R8 (ENSTSYG00000010379) #16	STX12 (ENSTSYG00000035844) #17	FAM76A (ENSTSYG00000004933) #18	IFI6 (ENSTSYG00000001596) #19	FGR (ENSTSYG00000030870) #20	AHDC1 (ENSTSYG00000010630) #21	WASF2 (ENSTSYG00000014297) #22	GPR3 (ENSTSYG00000034225) #23	CD164L2 (ENSTSYG00000033975) #24	FCN3 (ENSTSYG00000012269) #25	MAP3K6 (ENSTSYG00000012237) #26	SYTL1 (ENSTSYG00000029347) #27	TMEM222 (ENSTSYG00000033362) #28	WDTC1 (ENSTSYG00000028104) #29	SLC9A1 (ENSTSYG00000035533) #30	FAM46B (ENSTSYG00000035698) #31	KDF1 (ENSTSYG00000027104) #33	NUDC (ENSTSYG00000003312) #34	NR0B2 (ENSTSYG00000033702) #35	GPATCH3 (ENSTSYG00000011753) #36	GPN2 (ENSTSYG00000011752) #37	SFN (ENSTSYG00000013087)
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Lemuriformes	ANCESTRAL SPECIES		ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a.`b #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Mouse lemur	MODERN SPECIES	11	ATP5IF1 (ENSMICG00000001227)	ENSMICG00000001222 #8	PTAFR (ENSMICG00000047486) #9	EYA3 (ENSMICG00000011109) #11	XKR8 (ENSMICG00000047287) #12	SMPDL3B (ENSMICG00000011091) #13	RPA2 (ENSMICG00000042716) #14	THEMIS2 (ENSMICG00000011084) #15	ENSMICG00000036349	PPP1R8 (ENSMICG00000043807) #16	ENSMICG00000011066 #17	FAM76A (ENSMICG00000038656) #18	IFI6 (ENSMICG00000008189) #19	FGR (ENSMICG00000006166) #20	AHDC1 (ENSMICG00000029375) #21	WASF2 (ENSMICG00000015799) #22	GPR3 (ENSMICG00000044683) #23	CD164L2 (ENSMICG00000015791) #24	FCN3 (ENSMICG00000015785) #25	MAP3K6 (ENSMICG00000015758) #26	SYTL1 (ENSMICG00000015733) #27	TMEM222 (ENSMICG00000015726) #28	WDTC1 (ENSMICG00000015711) #29	SLC9A1 (ENSMICG00000015698) #30	TENT5B (ENSMICG00000033781) #31	KDF1 (ENSMICG00000043402) #33	NUDC (ENSMICG00000027846) #34	NR0B2 (ENSMICG00000032290) #35	GPATCH3 (ENSMICG00000015656) #36	GPN2 (ENSMICG00000029529) #37	SFN (ENSMICG00000015648)
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a.`b #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000163178 #19	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Coquerels sifaka	MODERN SPECIES	344	PHACTR4 (ENSPCOG00000015433)	MED18 (ENSPCOG00000022541)	SESN2 (ENSPCOG00000023322)	ATP5IF1 (ENSPCOG00000028473)	EYA3 (ENSPCOG00000009524) #11	XKR8 (ENSPCOG00000009916) #12	SMPDL3B (ENSPCOG00000026165) #13	RPA2 (ENSPCOG00000023673) #14	THEMIS2 (ENSPCOG00000002667) #15	PPP1R8 (ENSPCOG00000013455) #16	STX12 (ENSPCOG00000014712) #17	FAM76A (ENSPCOG00000017956) #18	IFI6 (ENSPCOG00000019541) #19	FGR (ENSPCOG00000021101) #20	AHDC1 (ENSPCOG00000012355) #21	WASF2 (ENSPCOG00000018308) #22	GPR3 (ENSPCOG00000007979) #23	CD164L2 (ENSPCOG00000008888) #24	FCN3 (ENSPCOG00000024318) #25	MAP3K6 (ENSPCOG00000027489) #26	SYTL1 (ENSPCOG00000017349) #27	TMEM222 (ENSPCOG00000015289) #28	WDTC1 (ENSPCOG00000019286) #29	SLC9A1 (ENSPCOG00000028671) #30	TENT5B (ENSPCOG00000011763) #31	ENSPCOG00000023329	KDF1 (ENSPCOG00000017396) #33	NUDC (ENSPCOG00000026222) #34	NR0B2 (ENSPCOG00000024094) #35	GPATCH3 (ENSPCOG00000020145) #36	GPN2 (ENSPCOG00000016261) #37
Greater bamboo lemur	MODERN SPECIES	691						RPA2 (ENSPSMG00000022009) #14	THEMIS2 (ENSPSMG00000021997) #15	PPP1R8 (ENSPSMG00000021970) #16	ENSPSMG00000021962	STX12 (ENSPSMG00000021953) #17	ENSPSMG00000021867 #18	ENSPSMG00000021791	IFI6 (ENSPSMG00000021789) #19	FGR (ENSPSMG00000021779) #20	AHDC1 (ENSPSMG00000021757) #21	WASF2 (ENSPSMG00000021751) #22
Bushbaby	MODERN SPECIES	271	SESN2 (ENSOGAG00000010330)	ENSOGAG00000010337	ENSOGAG00000015597 #8	PTAFR (ENSOGAG00000029942) #9	XKR8 (ENSOGAG00000015591) #12	SMPDL3B (ENSOGAG00000015590) #13	RPA2 (ENSOGAG00000015583) #14	THEMIS2 (ENSOGAG00000015580) #15	EYA3 (ENSOGAG00000015592) #11	ENSOGAG00000015577 #16	STX12 (ENSOGAG00000015570) #17	FAM76A (ENSOGAG00000015566) #18	IFI6 (ENSOGAG00000027393) #19	FGR (ENSOGAG00000015559) #20	AHDC1 (ENSOGAG00000034492) #21	WASF2 (ENSOGAG00000033524) #22	GPR3 (ENSOGAG00000029314) #23	CD164L2 (ENSOGAG00000015109) #24	FCN3 (ENSOGAG00000015106) #25	MAP3K6 (ENSOGAG00000015094) #26	SYTL1 (ENSOGAG00000015086) #27	TMEM222 (ENSOGAG00000015081) #28	WDTC1 (ENSOGAG00000015076) #29	SLC9A1 (ENSOGAG00000002087) #30	TENT5B (ENSOGAG00000002086) #31	TRNP1 (ENSOGAG00000029493)	KDF1 (ENSOGAG00000002084) #33	NUDC (ENSOGAG00000002080) #34	NR0B2 (ENSOGAG00000002078) #35	GPATCH3 (ENSOGAG00000011647) #36	GPN2 (ENSOGAG00000033911) #37
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Glires	ANCESTRAL SPECIES		ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Lagomorpha	ANCESTRAL SPECIES	21	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00940000164617	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37	ENSGT00940000156585	ENSGT00390000013174
Rabbit	MODERN SPECIES	4	GMEB1 (ENSOCUG00000010893)	TAF12 (ENSOCUG00000003935)	RAB42 (ENSOCUG00000003933)	ENSOCUG00000002353	ENSOCUG00000002346	PHACTR4 (ENSOCUG00000027528)	SESN2 (ENSOCUG00000014896)	ENSOCUG00000017932	PTAFR (ENSOCUG00000017831) #9	EYA3 (ENSOCUG00000008020) #11	SMPDL3B (ENSOCUG00000012589) #13	PPP1R8 (ENSOCUG00000013594) #16	FAM76A (ENSOCUG00000014830) #18	FGR (ENSOCUG00000008922) #20	AHDC1 (ENSOCUG00000008914) #21	WASF2 (ENSOCUG00000002394) #22	GPR3 (ENSOCUG00000027272) #23	ENSOCUG00000007587 #24	MAP3K6 (ENSOCUG00000002379) #26	SYTL1 (ENSOCUG00000002371) #27	TMEM222 (ENSOCUG00000007371) #28	WDTC1 (ENSOCUG00000016358) #29	SLC9A1 (ENSOCUG00000023061) #30	ENSOCUG00000006426 #31	KDF1 (ENSOCUG00000006421) #33	NUDC (ENSOCUG00000006418) #34	NR0B2 (ENSOCUG00000006416) #35	GPATCH3 (ENSOCUG00000006411) #36	ENSOCUG00000006407 #37	ZDHHC18 (ENSOCUG00000006400)	PIGV (ENSOCUG00000017959)
Pika	MODERN SPECIES	3553																WASF2 (ENSOPRG00000002324) #22	GPR3 (ENSOPRG00000002319) #23	CD164L2 (ENSOPRG00000002306) #24	ENSOPRG00000002269	MAP3K6 (ENSOPRG00000002203) #26	ENSOPRG00000002184 #27	TMEM222 (ENSOPRG00000002159) #28	WDTC1 (ENSOPRG00000002127) #29
Rodentia	ANCESTRAL SPECIES		ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Marmotini	ANCESTRAL SPECIES		ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT00960000190607	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Marmotini_b	ANCESTRAL SPECIES		ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT00960000190607	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37	ENSGT01090000260040.b.b.b.a
Arctic ground squirrel	MODERN SPECIES	92	ENSUPAG00010020838	SESN2 (ENSUPAG00010020839)	ATP5IF1 (ENSUPAG00010020850)	ENSUPAG00010020856	PTAFR (ENSUPAG00010020865) #9	EYA3 (ENSUPAG00010020872) #11	XKR8 (ENSUPAG00010020998) #12	SMPDL3B (ENSUPAG00010021005) #13	THEMIS2 (ENSUPAG00010021016) #15	PPP1R8 (ENSUPAG00010021025) #16	ENSUPAG00010021039	STX12 (ENSUPAG00010021044) #17	FAM76A (ENSUPAG00010021053) #18	FGR (ENSUPAG00010021065) #20	AHDC1 (ENSUPAG00010021095) #21	WASF2 (ENSUPAG00010021099) #22	GPR3 (ENSUPAG00010021112) #23	CD164L2 (ENSUPAG00010021117) #24	MAP3K6 (ENSUPAG00010021121) #26	SYTL1 (ENSUPAG00010021146) #27	TMEM222 (ENSUPAG00010021173) #28	WDTC1 (ENSUPAG00010021189) #29	SLC9A1 (ENSUPAG00010021229) #30	ENSUPAG00010021249	TENT5B (ENSUPAG00010021251) #31	TRNP1 (ENSUPAG00010021254)	ENSUPAG00010021256	KDF1 (ENSUPAG00010021258) #33	NUDC (ENSUPAG00010021264) #34	NR0B2 (ENSUPAG00010021267) #35	GPATCH3 (ENSUPAG00010021268) #36
Squirrel	MODERN SPECIES	74	MED18 (ENSSTOG00000020723)	SESN2 (ENSSTOG00000009293)	ATP5IF1 (ENSSTOG00000020766)	DNAJC8 (ENSSTOG00000012834) #8	PTAFR (ENSSTOG00000015934) #9	EYA3 (ENSSTOG00000004478) #11	XKR8 (ENSSTOG00000023254) #12	SMPDL3B (ENSSTOG00000004468) #13	RPA2 (ENSSTOG00000004433) #14	THEMIS2 (ENSSTOG00000034218) #15	PPP1R8 (ENSSTOG00000004381) #16	STX12 (ENSSTOG00000019943) #17	FAM76A (ENSSTOG00000004331) #18	FGR (ENSSTOG00000026717) #20	AHDC1 (ENSSTOG00000025025) #21	WASF2 (ENSSTOG00000003138) #22	GPR3 (ENSSTOG00000024790) #23	CD164L2 (ENSSTOG00000024078) #24	MAP3K6 (ENSSTOG00000014251) #26	SYTL1 (ENSSTOG00000014242) #27	TMEM222 (ENSSTOG00000014234) #28	WDTC1 (ENSSTOG00000014225) #29	SLC9A1 (ENSSTOG00000009815) #30	ENSSTOG00000025429	ENSSTOG00000021677	TENT5B (ENSSTOG00000022787) #31	KDF1 (ENSSTOG00000015233) #33	NUDC (ENSSTOG00000021201) #34	NR0B2 (ENSSTOG00000024249) #35	GPATCH3 (ENSSTOG00000015220) #36	GPN2 (ENSSTOG00000015216) #37
Alpin marmot	MODERN SPECIES	15	MED18 (ENSMMMG00000013084)	SESN2 (ENSMMMG00000013099)	ATP5IF1 (ENSMMMG00000013117)	DNAJC8 (ENSMMMG00000013133) #8	PTAFR (ENSMMMG00000013184) #9	EYA3 (ENSMMMG00000013195) #11	XKR8 (ENSMMMG00000013348) #12	SMPDL3B (ENSMMMG00000013366) #13	RPA2 (ENSMMMG00000013382) #14	THEMIS2 (ENSMMMG00000013395) #15	PPP1R8 (ENSMMMG00000013396) #16	ENSMMMG00000013416	STX12 (ENSMMMG00000013420) #17	FAM76A (ENSMMMG00000013430) #18	FGR (ENSMMMG00000013453) #20	WASF2 (ENSMMMG00000013504) #22	GPR3 (ENSMMMG00000013517) #23	CD164L2 (ENSMMMG00000013519) #24	MAP3K6 (ENSMMMG00000013538) #26	SYTL1 (ENSMMMG00000013574) #27	TMEM222 (ENSMMMG00000013607) #28	WDTC1 (ENSMMMG00000013616) #29	SLC9A1 (ENSMMMG00000013639) #30	TENT5B (ENSMMMG00000013661) #31	TRNP1 (ENSMMMG00000013667)	ENSMMMG00000013673	KDF1 (ENSMMMG00000013677) #33	NUDC (ENSMMMG00000013689) #34	NR0B2 (ENSMMMG00000013702) #35	GPATCH3 (ENSMMMG00000013707) #36	ENSMMMG00000013717 #37
Eurasian red squirrel	MODERN SPECIES		SESN2 (ENSSVLG00005011840)	ATP5IF1 (ENSSVLG00005011758)	DNAJC8 (ENSSVLG00005011722) #8	PTAFR (ENSSVLG00005011699) #9	EYA3 (ENSSVLG00005011513) #11	ENSSVLG00005011412	XKR8 (ENSSVLG00005011375) #12	SMPDL3B (ENSSVLG00005011082) #13	RPA2 (ENSSVLG00005010920) #14	THEMIS2 (ENSSVLG00005010773) #15	PPP1R8 (ENSSVLG00005010667) #16	STX12 (ENSSVLG00005010643) #17	ENSSVLG00005010611	FAM76A (ENSSVLG00005010519) #18	FGR (ENSSVLG00005003584) #20	WASF2 (ENSSVLG00005003551) #22	GPR3 (ENSSVLG00005003531) #23	CD164L2 (ENSSVLG00005003518) #24	MAP3K6 (ENSSVLG00005003393) #26	SYTL1 (ENSSVLG00005003264) #27	TMEM222 (ENSSVLG00005003203) #28	WDTC1 (ENSSVLG00005003051) #29	SLC9A1 (ENSSVLG00005002990) #30	ENSSVLG00005002968	TENT5B (ENSSVLG00005002952) #31	TRNP1 (ENSSVLG00005002944)	ENSSVLG00005002925	KDF1 (ENSSVLG00005002908) #33	NUDC (ENSSVLG00005002888) #34	NR0B2 (ENSSVLG00005002872) #35	ENSSVLG00005002863 #36
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Naked mole-rat female	MODERN SPECIES	26	SESN2 (ENSHGLG00000011617)	ENSHGLG00000050011	DNAJC8 (ENSHGLG00000011449) #8	PTAFR (ENSHGLG00000048424) #9	ENSHGLG00000032519	EYA3 (ENSHGLG00000018515) #11	ENSHGLG00000046470	XKR8 (ENSHGLG00000012712) #12	SMPDL3B (ENSHGLG00000012112) #13	RPA2 (ENSHGLG00000018528) #14	THEMIS2 (ENSHGLG00000019146) #15	ENSHGLG00000014326 #16	FAM76A (ENSHGLG00000009747) #18	FGR (ENSHGLG00000018738) #20	AHDC1 (ENSHGLG00000014470) #21	WASF2 (ENSHGLG00000048286) #22	GPR3 (ENSHGLG00000046961) #23	ENSHGLG00000013863 #24	FCN3 (ENSHGLG00000012337) #25	MAP3K6 (ENSHGLG00000012888) #26	SYTL1 (ENSHGLG00000011880) #27	TMEM222 (ENSHGLG00000011121) #28	ENSHGLG00000007610	WDTC1 (ENSHGLG00000013846) #29	ENSHGLG00000044722	SLC9A1 (ENSHGLG00000036829) #30	ENSHGLG00000047714	TENT5B (ENSHGLG00000034048) #31	TRNP1 (ENSHGLG00000041801)	KDF1 (ENSHGLG00000012217) #33	NUDC (ENSHGLG00000011404) #34
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37	ENSGT01090000260040.b.b.b.a
Guinea pig	MODERN SPECIES	25	SESN2 (ENSCPOG00000000236)	ATP5IF1 (ENSCPOG00000030836)	DNAJC8 (ENSCPOG00000014652) #8	PTAFR (ENSCPOG00000031748) #9	EYA3 (ENSCPOG00000012512) #11	ENSCPOG00000033302	SMPDL3B (ENSCPOG00000008773) #13	RPA2 (ENSCPOG00000008766) #14	THEMIS2 (ENSCPOG00000033796) #15	PPP1R8 (ENSCPOG00000036078) #16	STX12 (ENSCPOG00000013160) #17	FAM76A (ENSCPOG00000006186) #18	ENSCPOG00000031828	FGR (ENSCPOG00000015092) #20	AHDC1 (ENSCPOG00000022607) #21	WASF2 (ENSCPOG00000012376) #22	GPR3 (ENSCPOG00000027123) #23	CD164L2 (ENSCPOG00000022092) #24	MAP3K6 (ENSCPOG00000012359) #26	SYTL1 (ENSCPOG00000012354) #27	TMEM222 (ENSCPOG00000020198) #28	WDTC1 (ENSCPOG00000012347) #29	SLC9A1 (ENSCPOG00000035897) #30	TENT5B (ENSCPOG00000032542) #31	KDF1 (ENSCPOG00000022999) #33	NUDC (ENSCPOG00000010413) #34	NR0B2 (ENSCPOG00000010409) #35	GPATCH3 (ENSCPOG00000010404) #36	GPN2 (ENSCPOG00000002848) #37	SFN (ENSCPOG00000035257)	ZDHHC18 (ENSCPOG00000010395)
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Long-tailed chinchilla	MODERN SPECIES	159	MED18 (ENSCLAG00000015343)	SESN2 (ENSCLAG00000011979)	ATP5IF1 (ENSCLAG00000014624)	DNAJC8 (ENSCLAG00000007390) #8	PTAFR (ENSCLAG00000017842) #9	EYA3 (ENSCLAG00000008901) #11	XKR8 (ENSCLAG00000011287) #12	SMPDL3B (ENSCLAG00000011768) #13	RPA2 (ENSCLAG00000010772) #14	THEMIS2 (ENSCLAG00000012140) #15	PPP1R8 (ENSCLAG00000011211) #16	STX12 (ENSCLAG00000013795) #17	FAM76A (ENSCLAG00000008844) #18	FGR (ENSCLAG00000014147) #20	AHDC1 (ENSCLAG00000013754) #21	WASF2 (ENSCLAG00000013958) #22	GPR3 (ENSCLAG00000012893) #23	FCN3 (ENSCLAG00000010084) #25	MAP3K6 (ENSCLAG00000015178) #26	SYTL1 (ENSCLAG00000011750) #27	TMEM222 (ENSCLAG00000014379) #28	WDTC1 (ENSCLAG00000012710) #29	SLC9A1 (ENSCLAG00000011250) #30	TENT5B (ENSCLAG00000010180) #31	KDF1 (ENSCLAG00000009636) #33	NUDC (ENSCLAG00000008191) #34	NR0B2 (ENSCLAG00000012438) #35	GPATCH3 (ENSCLAG00000012064) #36	GPN2 (ENSCLAG00000015368) #37	SFN (ENSCLAG00000018088)	ZDHHC18 (ENSCLAG00000015099)
Degu	MODERN SPECIES	204	ENSODEG00000003721 #8	PTAFR (ENSODEG00000018990) #9	EYA3 (ENSODEG00000003507) #11	XKR8 (ENSODEG00000003481) #12	ENSODEG00000003467 #13	ENSODEG00000004443 #14	THEMIS2 (ENSODEG00000004403) #15	ENSODEG00000004373	PPP1R8 (ENSODEG00000004352) #16	STX12 (ENSODEG00000004182) #17	ENSODEG00000019037	FAM76A (ENSODEG00000004142) #18	ENSODEG00000019010	FGR (ENSODEG00000004016) #20	AHDC1 (ENSODEG00000019150) #21	WASF2 (ENSODEG00000003793) #22	GPR3 (ENSODEG00000004543) #23	CD164L2 (ENSODEG00000004416) #24	MAP3K6 (ENSODEG00000004172) #26	SYTL1 (ENSODEG00000003707) #27	TMEM222 (ENSODEG00000003675) #28	WDTC1 (ENSODEG00000003804) #29	ENSODEG00000003743	SLC9A1 (ENSODEG00000003659) #30	TENT5B (ENSODEG00000003616) #31	TRNP1 (ENSODEG00000003604)	ENSODEG00000003581 #33	ENSODEG00000003339 #34	NR0B2 (ENSODEG00000003311) #35	GPATCH3 (ENSODEG00000003292) #36	GPN2 (ENSODEG00000003267) #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Kangaroo rat	MODERN SPECIES	325	Med18 (ENSDORG00000003626)	Sesn2 (ENSDORG00000004491)	Atpif1 (ENSDORG00000004489)	Dnajc8 (ENSDORG00000004488) #8	Ptafr (ENSDORG00000027100) #9	Eya3 (ENSDORG00000015614) #11	Xkr8 (ENSDORG00000023428) #12	Smpdl3b (ENSDORG00000015612) #13	Rpa2 (ENSDORG00000003741) #14	Themis2 (ENSDORG00000003740) #15	ENSDORG00000025172 #16	Stx12 (ENSDORG00000001059) #17	Fam76a (ENSDORG00000000575) #18	Fgr (ENSDORG00000015238) #20	Ahdc1 (ENSDORG00000010729) #21	Wasf2 (ENSDORG00000007346) #22	Gpr3 (ENSDORG00000007347) #23	Cd164l2 (ENSDORG00000009477) #24	ENSDORG00000009474 #25	Map3k6 (ENSDORG00000009469) #26	Sytl1 (ENSDORG00000009466) #27	Tmem222 (ENSDORG00000009464) #28	Wdtc1 (ENSDORG00000012982) #29	Slc9a1 (ENSDORG00000012211) #30	Tent5b (ENSDORG00000015648) #31	ENSDORG00000030030	Kdf1 (ENSDORG00000023459) #33	Nudc (ENSDORG00000026035) #34	Nr0b2 (ENSDORG00000023804) #35	ENSDORG00000005205 #36	Gpn2 (ENSDORG00000005203) #37
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000163188 #25	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36
Lesser Egyptian jerboa	MODERN SPECIES	201	Phactr4 (ENSJJAG00000015640)	Sesn2 (ENSJJAG00000011184)	Atpif1 (ENSJJAG00000010517)	ENSJJAG00000009301	Ptafr (ENSJJAG00000012719) #9	Eya3 (ENSJJAG00000017580) #11	Xkr8 (ENSJJAG00000015552) #12	Smpdl3b (ENSJJAG00000015036) #13	ENSJJAG00000014579 #14	Themis2 (ENSJJAG00000012926) #15	ENSJJAG00000010784 #16	Stx12 (ENSJJAG00000004079) #17	ENSJJAG00000002452 #18	Fgr (ENSJJAG00000019812) #20	Ahdc1 (ENSJJAG00000019425) #21	Wasf2 (ENSJJAG00000019149) #22	Gpr3 (ENSJJAG00000018961) #23	Cd164l2 (ENSJJAG00000014470) #24	ENSJJAG00000014104 #25	Map3k6 (ENSJJAG00000020163) #26	Sytl1 (ENSJJAG00000011352) #27	Tmem222 (ENSJJAG00000002275) #28	Wdtc1 (ENSJJAG00000021957) #29	Slc9a1 (ENSJJAG00000019281) #30	ENSJJAG00000017789 #31	Kdf1 (ENSJJAG00000017615) #33	Nudc (ENSJJAG00000017209) #34	Nr0b2 (ENSJJAG00000012389) #35	Gpatch3 (ENSJJAG00000003292) #36	Gpn2 (ENSJJAG00000022134) #37	Sfn (ENSJJAG00000012903)
Muroidea	ANCESTRAL SPECIES	3	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	967										Ppp1r8 (ENSNGAG00000001089) #16	Stx12 (ENSNGAG00000022319) #17	Fam76a (ENSNGAG00000021702) #18	ENSNGAG00000012320	Fgr (ENSNGAG00000014779) #20	Ahdc1 (ENSNGAG00000013639) #21	Wasf2 (ENSNGAG00000017438) #22	Gpr3 (ENSNGAG00000017974) #23	Cd164l2 (ENSNGAG00000019740) #24	Map3k6 (ENSNGAG00000017010) #26	Sytl1 (ENSNGAG00000014815) #27	Tmem222 (ENSNGAG00000011488) #28	Wdtc1 (ENSNGAG00000013121) #29	Slc9a1 (ENSNGAG00000016127) #30	ENSNGAG00000020552	Tent5b (ENSNGAG00000010187) #31	ENSNGAG00000016538
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00900000143263	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Mus	ANCESTRAL SPECIES	3	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00900000143263	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00900000143263	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00900000143263	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Mouse	MODERN SPECIES	13	Med18 (ENSMUSG00000066042)	Sesn2 (ENSMUSG00000028893)	Atpif1 (ENSMUSG00000054428)	Dnajc8 (ENSMUSG00000054405) #8	Ptafr (ENSMUSG00000056529) #9	Eya3 (ENSMUSG00000028886) #11	Xkr8 (ENSMUSG00000037752) #12	Smpdl3b (ENSMUSG00000028885) #13	Rpa2 (ENSMUSG00000028884) #14	Themis2 (ENSMUSG00000037731) #15	Ppp1r8 (ENSMUSG00000028882) #16	Stx12 (ENSMUSG00000028879) #17	Fam76a (ENSMUSG00000028878) #18	Fgr (ENSMUSG00000028874) #20	Ahdc1 (ENSMUSG00000037692) #21	Wasf2 (ENSMUSG00000028868) #22	Gpr3 (ENSMUSG00000049649) #23	Cd164l2 (ENSMUSG00000028865) #24	Map3k6 (ENSMUSG00000028862) #26	Sytl1 (ENSMUSG00000028860) #27	Tmem222 (ENSMUSG00000028857) #28	Wdtc1 (ENSMUSG00000037622) #29	Slc9a1 (ENSMUSG00000028854) #30	Tent5b (ENSMUSG00000046694) #31	Trnp1 (ENSMUSG00000056596)	Kdf1 (ENSMUSG00000037600) #33	Nudc (ENSMUSG00000028851) #34	Nr0b2 (ENSMUSG00000037583) #35	Gpatch3 (ENSMUSG00000028850) #36	Gpn2 (ENSMUSG00000028848) #37	Sfn (ENSMUSG00000047281)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073.g #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00900000143263	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Steppe mouse	MODERN SPECIES	3343															Ahdc1 (ENSMSIG00000026167) #21	Wasf2 (ENSMSIG00000026175) #22	Gpr3 (ENSMSIG00000026220) #23	Cd164l2 (ENSMSIG00000026225) #24	Map3k6 (ENSMSIG00000026242) #26	ENSMSIG00000026328 #27	Tmem222 (ENSMSIG00000026400) #28	Wdtc1 (ENSMSIG00000026410) #29	Slc9a1 (ENSMSIG00000026439) #30	Tent5b (ENSMSIG00000026455) #31	ENSMSIG00000026463	Trnp1 (ENSMSIG00000026468)	Kdf1 (ENSMSIG00000026473) #33	ENSMSIG00000026482	Nudc (ENSMSIG00000026485) #34	Nr0b2 (ENSMSIG00000026492) #35	Gpatch3 (ENSMSIG00000026503) #36
spretus	MODERN SPECIES	13	Med18 (MGP_SPRETEiJ_G0027547)	Sesn2 (MGP_SPRETEiJ_G0027548)	Atpif1 (MGP_SPRETEiJ_G0027549)	Dnajc8 (MGP_SPRETEiJ_G0027550) #8	Ptafr (MGP_SPRETEiJ_G0027551) #9	Eya3 (MGP_SPRETEiJ_G0027552) #11	Xkr8 (MGP_SPRETEiJ_G0027553) #12	Smpdl3b (MGP_SPRETEiJ_G0027554) #13	Rpa2 (MGP_SPRETEiJ_G0027555) #14	Themis2 (MGP_SPRETEiJ_G0027556) #15	Ppp1r8 (MGP_SPRETEiJ_G0027557) #16	Stx12 (MGP_SPRETEiJ_G0027558) #17	Fam76a (MGP_SPRETEiJ_G0027559) #18	Fgr (MGP_SPRETEiJ_G0027560) #20	Ahdc1 (MGP_SPRETEiJ_G0027561) #21	Wasf2 (MGP_SPRETEiJ_G0027562) #22	Gpr3 (MGP_SPRETEiJ_G0027563) #23	Cd164l2 (MGP_SPRETEiJ_G0027564) #24	Map3k6 (MGP_SPRETEiJ_G0027565) #26	Sytl1 (MGP_SPRETEiJ_G0027566) #27	Tmem222 (MGP_SPRETEiJ_G0027567) #28	Wdtc1 (MGP_SPRETEiJ_G0027568) #29	Slc9a1 (MGP_SPRETEiJ_G0027569) #30	Tent5b (MGP_SPRETEiJ_G0027570) #31	Trnp1 (MGP_SPRETEiJ_G0027571)	Kdf1 (MGP_SPRETEiJ_G0027572) #33	Nudc (MGP_SPRETEiJ_G0027573) #34	Nr0b2 (MGP_SPRETEiJ_G0027574) #35	Gpatch3 (MGP_SPRETEiJ_G0027575) #36	Gpn2 (MGP_SPRETEiJ_G0027576) #37	Zdhhc18 (MGP_SPRETEiJ_G0027577)
Ryukyu mouse	MODERN SPECIES	13	Med18 (MGP_CAROLIEiJ_G0026566)	Sesn2 (MGP_CAROLIEiJ_G0026567)	Atpif1 (MGP_CAROLIEiJ_G0026568)	MGP_CAROLIEiJ_G0026569 #8	Ptafr (MGP_CAROLIEiJ_G0026570) #9	Eya3 (MGP_CAROLIEiJ_G0026571) #11	Xkr8 (MGP_CAROLIEiJ_G0026572) #12	Smpdl3b (MGP_CAROLIEiJ_G0026573) #13	Rpa2 (MGP_CAROLIEiJ_G0026574) #14	Themis2 (MGP_CAROLIEiJ_G0026575) #15	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #16	Stx12 (MGP_CAROLIEiJ_G0026577) #17	Fam76a (MGP_CAROLIEiJ_G0026578) #18	Fgr (MGP_CAROLIEiJ_G0026579) #20	Ahdc1 (MGP_CAROLIEiJ_G0026580) #21	Wasf2 (MGP_CAROLIEiJ_G0026581) #22	Gpr3 (MGP_CAROLIEiJ_G0026582) #23	Cd164l2 (MGP_CAROLIEiJ_G0026583) #24	Map3k6 (MGP_CAROLIEiJ_G0026584) #26	Sytl1 (MGP_CAROLIEiJ_G0026585) #27	Tmem222 (MGP_CAROLIEiJ_G0026586) #28	Wdtc1 (MGP_CAROLIEiJ_G0026587) #29	Slc9a1 (MGP_CAROLIEiJ_G0026588) #30	Tent5b (MGP_CAROLIEiJ_G0026589) #31	Trnp1 (MGP_CAROLIEiJ_G0026590)	Kdf1 (MGP_CAROLIEiJ_G0026591) #33	Nudc (MGP_CAROLIEiJ_G0026592) #34	Nr0b2 (MGP_CAROLIEiJ_G0026593) #35	Gpatch3 (MGP_CAROLIEiJ_G0026594) #36	Gpn2 (MGP_CAROLIEiJ_G0026595) #37	Sfn (MGP_CAROLIEiJ_G0026596)
Shrew mouse	MODERN SPECIES	19	Med18 (MGP_PahariEiJ_G0028899)	Sesn2 (MGP_PahariEiJ_G0028900)	Atpif1 (MGP_PahariEiJ_G0028901)	MGP_PahariEiJ_G0028902 #8	Ptafr (MGP_PahariEiJ_G0028903) #9	Eya3 (MGP_PahariEiJ_G0028904) #11	Xkr8 (MGP_PahariEiJ_G0028905) #12	Smpdl3b (MGP_PahariEiJ_G0028906) #13	Rpa2 (MGP_PahariEiJ_G0028907) #14	Themis2 (MGP_PahariEiJ_G0028908) #15	Ppp1r8 (MGP_PahariEiJ_G0028909) #16	MGP_PahariEiJ_G0028910 #17	Fam76a (MGP_PahariEiJ_G0028911) #18	Fgr (MGP_PahariEiJ_G0028912) #20	Ahdc1 (MGP_PahariEiJ_G0028913) #21	Wasf2 (MGP_PahariEiJ_G0028914) #22	Gpr3 (MGP_PahariEiJ_G0028915) #23	Cd164l2 (MGP_PahariEiJ_G0028916) #24	Map3k6 (MGP_PahariEiJ_G0028917) #26	Sytl1 (MGP_PahariEiJ_G0028918) #27	Tmem222 (MGP_PahariEiJ_G0028919) #28	Wdtc1 (MGP_PahariEiJ_G0028920) #29	Slc9a1 (MGP_PahariEiJ_G0028921) #30	Tent5b (MGP_PahariEiJ_G0028922) #31	Trnp1 (MGP_PahariEiJ_G0028923)	Kdf1 (MGP_PahariEiJ_G0028924) #33	Nudc (MGP_PahariEiJ_G0028925) #34	Nr0b2 (MGP_PahariEiJ_G0028926) #35	Gpatch3 (MGP_PahariEiJ_G0028927) #36	Gpn2 (MGP_PahariEiJ_G0028928) #37	Sfn (MGP_PahariEiJ_G0028929)
Rat	MODERN SPECIES	15	Med18 (ENSRNOG00000067073)	Sesn2 (ENSRNOG00000042785)	Atp5if1 (ENSRNOG00000013300)	Dnajc8 (ENSRNOG00000013255) #8	Ptafr (ENSRNOG00000013231) #9	Eya3 (ENSRNOG00000010396) #11	Xkr8 (ENSRNOG00000024312) #12	Smpdl3b (ENSRNOG00000042326) #13	Rpa2 (ENSRNOG00000013005) #14	Themis2 (ENSRNOG00000012965) #15	Ppp1r8 (ENSRNOG00000059550) #16	Stx12 (ENSRNOG00000011804) #17	Fam76a (ENSRNOG00000011254) #18	Fgr (ENSRNOG00000009912) #20	Ahdc1 (ENSRNOG00000042855) #21	Wasf2 (ENSRNOG00000009805) #22	Gpr3 (ENSRNOG00000009540) #23	Sytl1 (ENSRNOG00000008600) #27	Cd164l2 (ENSRNOG00000009505) #24	Map3k6 (ENSRNOG00000008936) #26	Tmem222 (ENSRNOG00000008564) #28	Wdtc1 (ENSRNOG00000008377) #29	Slc9a1 (ENSRNOG00000007982) #30	Tent5b (ENSRNOG00000056153) #31	Trnp1 (ENSRNOG00000055936)	ENSRNOG00000068236	Kdf1 (ENSRNOG00000055933) #33	AC118963.1 (ENSRNOG00000049922)	Nudc (ENSRNOG00000051720) #34	Nr0b2 (ENSRNOG00000007229) #35	ENSRNOG00000066253
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000164617	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00900000143263	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37
Chinese hamster chok1gshd	MODERN SPECIES	111	MED18 (ENSCGRG00001022480)	Sesn2 (ENSCGRG00001020650)	Atpif1 (ENSCGRG00001023397)	ENSCGRG00001000534 #8	Ptafr (ENSCGRG00001012404) #9	Eya3 (ENSCGRG00001018576) #11	Xkr8 (ENSCGRG00001017118) #12	Smpdl3b (ENSCGRG00001016883) #13	Rpa2 (ENSCGRG00001007332) #14	Themis2 (ENSCGRG00001024729) #15	Ppp1r8 (ENSCGRG00001019839) #16	Stx12 (ENSCGRG00001016934) #17	ENSCGRG00001007863 #18	Fgr (ENSCGRG00001024485) #20	Ahdc1 (ENSCGRG00001012820) #21	Wasf2 (ENSCGRG00001020852) #22	Gpr3 (ENSCGRG00001001244) #23	Cd164l2 (ENSCGRG00001024895) #24	Map3k6 (ENSCGRG00001019547) #26	Sytl1 (ENSCGRG00001013995) #27	Tmem222 (ENSCGRG00001020116) #28	Wdtc1 (ENSCGRG00001015126) #29	Slc9a1 (ENSCGRG00001002747) #30	Tent5b (ENSCGRG00001024770) #31	Trnp1 (ENSCGRG00001024587)	ENSCGRG00001022474	Kdf1 (ENSCGRG00001003180) #33	ENSCGRG00001022208 #34	Nr0b2 (ENSCGRG00001020066) #35	Gpatch3 (ENSCGRG00001002930) #36	Gpn2 (ENSCGRG00001023875) #37
Golden Hamster	MODERN SPECIES	709	Phactr4 (ENSMAUG00000018484)	Med18 (ENSMAUG00000019176)	Sesn2 (ENSMAUG00000000726)	ENSMAUG00000018320	Ptafr (ENSMAUG00000008850) #9	Eya3 (ENSMAUG00000015674) #11	Xkr8 (ENSMAUG00000009395) #12	Smpdl3b (ENSMAUG00000014184) #13	Rpa2 (ENSMAUG00000002825) #14	Themis2 (ENSMAUG00000000821) #15	Ppp1r8 (ENSMAUG00000009797) #16	Stx12 (ENSMAUG00000016314) #17	Fam76a (ENSMAUG00000016561) #18	Fgr (ENSMAUG00000006765) #20	Ahdc1 (ENSMAUG00000013108) #21	Wasf2 (ENSMAUG00000012124) #22	Gpr3 (ENSMAUG00000014246) #23	ENSMAUG00000011191	Map3k6 (ENSMAUG00000017302) #26	Sytl1 (ENSMAUG00000018014) #27	Tmem222 (ENSMAUG00000007829) #28	Wdtc1 (ENSMAUG00000004693) #29	ENSMAUG00000001078 #30	Tent5b (ENSMAUG00000014675) #31	Trnp1 (ENSMAUG00000019939)	Kdf1 (ENSMAUG00000021929) #33	Nudc (ENSMAUG00000008166) #34	Nr0b2 (ENSMAUG00000020860) #35	Gpatch3 (ENSMAUG00000002005) #36	Gpn2 (ENSMAUG00000013057) #37	Sfn (ENSMAUG00000008489)
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00390000006264	ENSGT00390000012569.a #8	ENSGT01060000248589.D #9	ENSGT00950000182978.B #11	ENSGT01090000260093.b #12	ENSGT00950000183182.a.a #13	ENSGT00390000010045 #14	ENSGT00530000063770.c.a #15	ENSGT00940000156115 #16	ENSGT01000000214440.A.a.b.a #17	ENSGT00940000160073 #18	ENSGT00940000157554 #20	ENSGT00390000018883 #21	ENSGT00950000182962.b.a #22	ENSGT01060000248564.b.a.a.a #23	ENSGT00530000063929.a.b #24	ENSGT00940000159398 #26	ENSGT00940000160932 #27	ENSGT00390000007371 #28	ENSGT00950000182900.B #29	ENSGT00940000156338 #30	ENSGT00940000160747 #31	ENSGT00390000017418	ENSGT00390000016565 #33	ENSGT00940000155361 #34	ENSGT00390000015719.c #35	ENSGT00390000004191 #36	ENSGT00950000183172.B #37	ENSGT01090000260040.b.b.b.a
Prairie vole	MODERN SPECIES	1	Med18 (ENSMOCG00000022182)	Sesn2 (ENSMOCG00000012718)	Atpif1 (ENSMOCG00000002419)	Dnajc8 (ENSMOCG00000017213) #8	Ptafr (ENSMOCG00000013409) #9	Eya3 (ENSMOCG00000004582) #11	Xkr8 (ENSMOCG00000002218) #12	Smpdl3b (ENSMOCG00000016324) #13	Rpa2 (ENSMOCG00000007092) #14	Themis2 (ENSMOCG00000003168) #15	ENSMOCG00000022691 #16	Stx12 (ENSMOCG00000014196) #17	Fam76a (ENSMOCG00000021395) #18	Fgr (ENSMOCG00000019562) #20	Ahdc1 (ENSMOCG00000016500) #21	Wasf2 (ENSMOCG00000015492) #22	Gpr3 (ENSMOCG00000014276) #23	Cd164l2 (ENSMOCG00000012161) #24	Map3k6 (ENSMOCG00000022830) #26	Sytl1 (ENSMOCG00000006535) #27	Tmem222 (ENSMOCG00000001826) #28	Wdtc1 (ENSMOCG00000021708) #29	Slc9a1 (ENSMOCG00000001951) #30	Tent5b (ENSMOCG00000006029) #31	Trnp1 (ENSMOCG00000004450)	Kdf1 (ENSMOCG00000008803) #33	ENSMOCG00000009769 #34	Nr0b2 (ENSMOCG00000022706) #35	Gpatch3 (ENSMOCG00000022375) #36	Gpn2 (ENSMOCG00000016502) #37	Sfn (ENSMOCG00000007160)
Northern American deer mouse	MODERN SPECIES	11	Sesn2 (ENSPEMG00000001779)	Atpif1 (ENSPEMG00000025196)	Dnajc8 (ENSPEMG00000013544) #8	Ptafr (ENSPEMG00000025544) #9	Eya3 (ENSPEMG00000000391) #11	Xkr8 (ENSPEMG00000025921) #12	Smpdl3b (ENSPEMG00000003316) #13	Rpa2 (ENSPEMG00000006270) #14	Themis2 (ENSPEMG00000008336) #15	Ppp1r8 (ENSPEMG00000003512) #16	Stx12 (ENSPEMG00000025346) #17	ENSPEMG00000014678 #18	Fgr (ENSPEMG00000000914) #20	Ahdc1 (ENSPEMG00000014274) #21	ENSPEMG00000013859	Wasf2 (ENSPEMG00000011815) #22	Gpr3 (ENSPEMG00000005212) #23	Cd164l2 (ENSPEMG00000013041) #24	Map3k6 (ENSPEMG00000015180) #26	Sytl1 (ENSPEMG00000011614) #27	Tmem222 (ENSPEMG00000017489) #28	Wdtc1 (ENSPEMG00000011264) #29	Slc9a1 (ENSPEMG00000008998) #30	Tent5b (ENSPEMG00000026289) #31	ENSPEMG00000024927	ENSPEMG00000020456	Kdf1 (ENSPEMG00000010418) #33	Nudc (ENSPEMG00000020579) #34	Nr0b2 (ENSPEMG00000020621) #35	Gpatch3 (ENSPEMG00000020632) #36	Gpn2 (ENSPEMG00000020796) #37