Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00390000014843	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Muroidea	ANCESTRAL SPECIES	31	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.b ##32	ENSGT01100000263574.a.f.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.b ##32	ENSGT01100000263574.a.f.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Mus	ANCESTRAL SPECIES	11	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.a.f ##32	ENSGT01100000263574.a.f.a.e.a #33	ENSGT01100000263574.a.f.a.e.b #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.a.e.b.a.a #32	ENSGT01100000263574.a.f.a.f ##32	ENSGT01100000263574.a.f.a.e.b.a.b ##32	ENSGT00390000002978 #34	ENSGT00940000159366 #35
Ryukyu mouse	MODERN SPECIES	6	Rhebl1 (MGP_CAROLIEiJ_G0020250) #7	Kmt2d (MGP_CAROLIEiJ_G0020249) #8	Prkag1 (MGP_CAROLIEiJ_G0020248) #9	Ddn (MGP_CAROLIEiJ_G0020247) #10	Wnt1 (MGP_CAROLIEiJ_G0020246) #11	Wnt10b (MGP_CAROLIEiJ_G0020245) #12	Arf3 (MGP_CAROLIEiJ_G0020244) #13	Fkbp11 (MGP_CAROLIEiJ_G0020243) #14	Ccdc65 (MGP_CAROLIEiJ_G0020242) #15	Rnd1 (MGP_CAROLIEiJ_G0020241) #16	Ddx23 (MGP_CAROLIEiJ_G0020240) #17	Cacnb3 (MGP_CAROLIEiJ_G0020239) #18	Adcy6 (MGP_CAROLIEiJ_G0020238) #19	Tex49 (MGP_CAROLIEiJ_G0020237) #20	Ccnt1 (MGP_CAROLIEiJ_G0020236) #21	Kansl2 (MGP_CAROLIEiJ_G0020235) #22	Or11m3 (MGP_CAROLIEiJ_G0020234) #23	Lalba (MGP_CAROLIEiJ_G0020233) #24	Or8s8 (MGP_CAROLIEiJ_G0020232) #25	Or8s10 (MGP_CAROLIEiJ_G0020231) #26	MGP_CAROLIEiJ_G0020230 #27	Or8s2 (MGP_CAROLIEiJ_G0020229) #28	Or8s5 (MGP_CAROLIEiJ_G0020228) #29	Zfp641 (MGP_CAROLIEiJ_G0020227) #30	H1f7 (MGP_CAROLIEiJ_G0020226) #31	MGP_CAROLIEiJ_G0020225 #32	MGP_CAROLIEiJ_G0020224 #33	Ccdc184 (MGP_CAROLIEiJ_G0020223) #34	Asb8 (MGP_CAROLIEiJ_G0020222) #35	Pfkm (MGP_CAROLIEiJ_G0020221) #36	Senp1 (MGP_CAROLIEiJ_G0020220) #37
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000159881.b	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.a.f ##32	ENSGT01100000263574.a.f.a.e.b.a.b ##32	ENSGT00390000002978 #34	ENSGT00940000159366 #35
Mouse	MODERN SPECIES	6	Rhebl1 (ENSMUSG00000023755) #7	Kmt2d (ENSMUSG00000048154) #8	Prkag1 (ENSMUSG00000067713) #9	Ddn (ENSMUSG00000059213) #10	Wnt1 (ENSMUSG00000022997) #11	Wnt10b (ENSMUSG00000022996) #12	Arf3 (ENSMUSG00000051853) #13	Fkbp11 (ENSMUSG00000003355) #14	Ccdc65 (ENSMUSG00000003354) #15	Rnd1 (ENSMUSG00000054855) #16	Ddx23 (ENSMUSG00000003360) #17	Cacnb3 (ENSMUSG00000003352) #18	Adcy6 (ENSMUSG00000022994) #19	Tex49 (ENSMUSG00000022993) #20	Ccnt1 (ENSMUSG00000011960) #21	Kansl2 (ENSMUSG00000022992) #22	Or11m3 (ENSMUSG00000054036) #23	Lalba (ENSMUSG00000022991) #24	OR5BS1P (ENSMUSG00000108728)	Or8s8 (ENSMUSG00000032987) #25	Or8s10 (ENSMUSG00000063780) #26	Or8s2 (ENSMUSG00000056184) #28	Or8s5 (ENSMUSG00000051793) #29	Or8s16 (ENSMUSG00000062037)	Zfp641 (ENSMUSG00000022987) #30	H1f7 (ENSMUSG00000048077) #31	Or10ad1b (ENSMUSG00000059460) ##32	Or10ad1 (ENSMUSG00000090129) #33	Gm44579 (ENSMUSG00000108748)	Or10ad1c (ENSMUSG00000075427) ##32	Ccdc184 (ENSMUSG00000029875) #34
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000159881.b	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.a.f ##32	ENSGT01100000263574.a.f.a.e.b.a.b ##32	ENSGT00390000002978 #34	ENSGT00940000159366 #35
spretus	MODERN SPECIES	6	Rhebl1 (MGP_SPRETEiJ_G0021147) #7	Kmt2d (MGP_SPRETEiJ_G0021146) #8	Prkag1 (MGP_SPRETEiJ_G0021145) #9	Ddn (MGP_SPRETEiJ_G0021144) #10	Wnt1 (MGP_SPRETEiJ_G0021143) #11	Wnt10b (MGP_SPRETEiJ_G0021142) #12	Arf3 (MGP_SPRETEiJ_G0021141) #13	Fkbp11 (MGP_SPRETEiJ_G0021140) #14	Ccdc65 (MGP_SPRETEiJ_G0021139) #15	Rnd1 (MGP_SPRETEiJ_G0021138) #16	Ddx23 (MGP_SPRETEiJ_G0021137) #17	Cacnb3 (MGP_SPRETEiJ_G0021136) #18	Adcy6 (MGP_SPRETEiJ_G0021135) #19	Tex49 (MGP_SPRETEiJ_G0021134) #20	Ccnt1 (MGP_SPRETEiJ_G0021133) #21	Kansl2 (MGP_SPRETEiJ_G0021132) #22	Or11m3 (MGP_SPRETEiJ_G0021131) #23	Lalba (MGP_SPRETEiJ_G0021130) #24	Or8s8 (MGP_SPRETEiJ_G0021129) #25	Or8s10 (MGP_SPRETEiJ_G0021128) #26	MGP_SPRETEiJ_G0021127 #27	Or8s2 (MGP_SPRETEiJ_G0021126) #28	Or8s5 (MGP_SPRETEiJ_G0021125) #29	MGP_SPRETEiJ_G0021124	Zfp641 (MGP_SPRETEiJ_G0021123) #30	H1f7 (MGP_SPRETEiJ_G0021122) #31	MGP_SPRETEiJ_G0021121 #32	MGP_SPRETEiJ_G0021120 ##32	Ccdc184 (MGP_SPRETEiJ_G0021119) #34	Asb8 (MGP_SPRETEiJ_G0021118) #35	Pfkm (MGP_SPRETEiJ_G0021117) #36
Steppe mouse	MODERN SPECIES	3092	ENSMSIG00000002356	Lmbr1l (ENSMSIG00000002200)	Dhh (ENSMSIG00000002172)	ENSMSIG00000002088 #7	Prkag1 (ENSMSIG00000001568) #9	Ddn (ENSMSIG00000001553) #10	Wnt1 (ENSMSIG00000001511) #11	Wnt10b (ENSMSIG00000001386) #12	Arf3 (ENSMSIG00000001320) #13	Ccdc65 (ENSMSIG00000001269) #15	Rnd1 (ENSMSIG00000001241) #16	Ddx23 (ENSMSIG00000001169) #17	Cacnb3 (ENSMSIG00000000901) #18	Adcy6 (ENSMSIG00000000695) #19	Ccnt1 (ENSMSIG00000000619) #21	Kansl2 (ENSMSIG00000000531) #22	Or11m3 (ENSMSIG00000000513) #23	Lalba (ENSMSIG00000000500) #24	ENSMSIG00000000476	Or8s8 (ENSMSIG00000000461) #25	Or8s2 (ENSMSIG00000000448) #28	Or8s5 (ENSMSIG00000000437) #29	ENSMSIG00000000424	ENSMSIG00000000412	Zfp641 (ENSMSIG00000000347) #30	H1f7 (ENSMSIG00000000314) #31	Or10ad1b (ENSMSIG00000000298) ##32	Ccdc184 (ENSMSIG00000000285) #34	Asb8 (ENSMSIG00000000221) #35	Pfkm (ENSMSIG00000000111) #36	Senp1 (ENSMSIG00000030788) #37
Shrew mouse	MODERN SPECIES	8	Rhebl1 (MGP_PahariEiJ_G0020253) #7	Kmt2d (MGP_PahariEiJ_G0020252) #8	Prkag1 (MGP_PahariEiJ_G0020251) #9	Ddn (MGP_PahariEiJ_G0020250) #10	Wnt1 (MGP_PahariEiJ_G0020249) #11	Wnt10b (MGP_PahariEiJ_G0020248) #12	Arf3 (MGP_PahariEiJ_G0020247) #13	Fkbp11 (MGP_PahariEiJ_G0020246) #14	Ccdc65 (MGP_PahariEiJ_G0020245) #15	Rnd1 (MGP_PahariEiJ_G0020244) #16	Ddx23 (MGP_PahariEiJ_G0020243) #17	Cacnb3 (MGP_PahariEiJ_G0020242) #18	Adcy6 (MGP_PahariEiJ_G0020241) #19	Tex49 (MGP_PahariEiJ_G0020240) #20	Ccnt1 (MGP_PahariEiJ_G0020239) #21	Kansl2 (MGP_PahariEiJ_G0020238) #22	Or11m3 (MGP_PahariEiJ_G0020237) #23	Lalba (MGP_PahariEiJ_G0020236) #24	Or8s8 (MGP_PahariEiJ_G0020235) #25	Or8s10 (MGP_PahariEiJ_G0020234) #26	MGP_PahariEiJ_G0020233 #27	Or8s2 (MGP_PahariEiJ_G0020232) #28	Or8s5 (MGP_PahariEiJ_G0020231) #29	Zfp641 (MGP_PahariEiJ_G0020230) #30	H1f7 (MGP_PahariEiJ_G0020229) #31	MGP_PahariEiJ_G0020228 #33	MGP_PahariEiJ_G0020227 #32	Ccdc184 (MGP_PahariEiJ_G0020226) #34	Asb8 (MGP_PahariEiJ_G0020225) #35	Pfkm (MGP_PahariEiJ_G0020224) #36	Senp1 (MGP_PahariEiJ_G0020223) #37
Rat	DUPLICATION
Rat	MODERN SPECIES	17	Rhebl1 (ENSRNOG00000054385) #7	Prkag1 (ENSRNOG00000070180) #9	Prkag1 (ENSRNOG00000061499) #8	Ddn (ENSRNOG00000059605) #10	Wnt1 (ENSRNOG00000061818) #11	Wnt10b (ENSRNOG00000061238) #12	Arf3 (ENSRNOG00000054775) #13	Fkbp11 (ENSRNOG00000070637) #14	Ccdc65 (ENSRNOG00000058916) #15	Rnd1 (ENSRNOG00000059857) #16	Ddx23 (ENSRNOG00000060154) #17	Cacnb3 (ENSRNOG00000054274) #18	Adcy6 (ENSRNOG00000054757) #19	Tex49 (ENSRNOG00000057264) #20	Ccnt1 (ENSRNOG00000053054) #21	Kansl2 (ENSRNOG00000060185) #22	Or11m3 (ENSRNOG00000031503) #23	Lalba (ENSRNOG00000010811) #24	ENSRNOG00000062462	Or8s8 (ENSRNOG00000070632) #25	Or8s10 (ENSRNOG00000067109) #26	Or8s2 (ENSRNOG00000033022) #28	Or8s5 (ENSRNOG00000064461) #29	Or8s16 (ENSRNOG00000067164) ##28	Zfp641 (ENSRNOG00000032447) #30	H1f7 (ENSRNOG00000029545) #31	Olr1877 (ENSRNOG00000070612) #32	Olfr287 (ENSRNOG00000066134) #32	Or10ad1 (ENSRNOG00000064488) #32	Ccdc184 (ENSRNOG00000021945) #34	Asb8 (ENSRNOG00000010099) #35
Rat	MODERN SPECIES	5	Ddx56 (ENSRNOG00000004670)	Npc1l1 (ENSRNOG00000049955)	Nudcd3 (ENSRNOG00000056148)	Camk2b (ENSRNOG00000052080)	Ykt6 (ENSRNOG00000014785)	Gck (ENSRNOG00000061527)	Myl7 (ENSRNOG00000014409)	Pold2 (ENSRNOG00000014098)	Aebp1 (ENSRNOG00000013720)	Polm (ENSRNOG00000013647)	Pgam2 (ENSRNOG00000013532)	Dbnl (ENSRNOG00000012378)	Urgcp (ENSRNOG00000012184)	Mrps24 (ENSRNOG00000011979)	ENSRNOG00000069799	AC136588.2 (ENSRNOG00000030988) #22	Ankrd36 (ENSRNOG00000056767)	Ccdc117 (ENSRNOG00000010706)	Xbp1 (ENSRNOG00000010298)	Znrf3 (ENSRNOG00000067305)	Kremen1 (ENSRNOG00000051487)	Emid1 (ENSRNOG00000033575)	Rhbdd3 (ENSRNOG00000027032)	Ewsr1 (ENSRNOG00000009437)	Rasl10a (ENSRNOG00000008951)	Gas2l1 (ENSRNOG00000009040)	Ap1b1 (ENSRNOG00000008786)	Nefh (ENSRNOG00000008716)	Thoc5 (ENSRNOG00000008456)	Nipsnap1 (ENSRNOG00000008374)	Nf2 (ENSRNOG00000007948)
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.b ##32	ENSGT01100000263574.a.f.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000164920 #27	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.f.b ##32	ENSGT01100000263574.a.f.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Chinese hamster chok1gshd	MODERN SPECIES	1	Rhebl1 (ENSCGRG00001005736) #7	Kmt2d (ENSCGRG00001004692) #8	Prkag1 (ENSCGRG00001003063) #9	Ddn (ENSCGRG00001004300) #10	Wnt1 (ENSCGRG00001003166) #11	Wnt10b (ENSCGRG00001004015) #12	Arf3 (ENSCGRG00001004437) #13	Fkbp11 (ENSCGRG00001012678) #14	Ccdc65 (ENSCGRG00001014624) #15	Rnd1 (ENSCGRG00001004988) #16	Ddx23 (ENSCGRG00001015090) #17	Cacnb3 (ENSCGRG00001007469) #18	Adcy6 (ENSCGRG00001002443) #19	Tex49 (ENSCGRG00001002641) #20	Ccnt1 (ENSCGRG00001010472) #21	Kansl2 (ENSCGRG00001007756) #22	Or11m3 (ENSCGRG00001010245) #23	Lalba (ENSCGRG00001004333) #24	ENSCGRG00001004394	Or8s8 (ENSCGRG00001010259) #25	Or8s10 (ENSCGRG00001009319) #26	Or8s2 (ENSCGRG00001008762) #28	Or8s5 (ENSCGRG00001007209) #29	Zfp641 (ENSCGRG00001008450) #30	H1f7 (ENSCGRG00001006632) #31	ENSCGRG00001001784 ##32	ENSCGRG00001009005	ENSCGRG00001008716 #32	ENSCGRG00001004363 #32	Ccdc184 (ENSCGRG00001009478) #34	ENSCGRG00001001830
Golden Hamster	MODERN SPECIES	626	ENSMAUG00000012521 #8	ENSMAUG00000012028 #8	Prkag1 (ENSMAUG00000011761) #9	Ddn (ENSMAUG00000011464) #10	Wnt1 (ENSMAUG00000012154) #11	Wnt10b (ENSMAUG00000012082) #12	Arf3 (ENSMAUG00000011928) #13	Fkbp11 (ENSMAUG00000015766) #14	Ccdc65 (ENSMAUG00000015430) #15	Rnd1 (ENSMAUG00000015221) #16	Ddx23 (ENSMAUG00000012336) #17	Cacnb3 (ENSMAUG00000012005) #18	Adcy6 (ENSMAUG00000011342) #19	Tex49 (ENSMAUG00000010854) #20	Ccnt1 (ENSMAUG00000015960) #21	Kansl2 (ENSMAUG00000015668) #22	Lalba (ENSMAUG00000013490) #24	ENSMAUG00000012783 #27	Or8s2 (ENSMAUG00000015201) #28	Or8s16 (ENSMAUG00000011283)	Zfp641 (ENSMAUG00000010993) #30	H1f7 (ENSMAUG00000010839) #31	ENSMAUG00000014007	ENSMAUG00000019216	Ccdc184 (ENSMAUG00000010780) #34	Asb8 (ENSMAUG00000019139) #35	Pfkm (ENSMAUG00000016492) #36	ENSMAUG00000015838	ENSMAUG00000015983 #37	Col2a1 (ENSMAUG00000019899)	Tmem106c (ENSMAUG00000017478)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000162388.A #26	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT01100000263574.a.f.b ##32	ENSGT01100000263574.a.f.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36	ENSGT00940000155489.b.f #37
Prairie vole	MODERN SPECIES	2	ENSMOCG00000016455 #8	ENSMOCG00000010694 #8	Prkag1 (ENSMOCG00000014481) #9	Ddn (ENSMOCG00000016200) #10	Wnt1 (ENSMOCG00000017789) #11	Wnt10b (ENSMOCG00000021764) #12	Arf3 (ENSMOCG00000020182) #13	Fkbp11 (ENSMOCG00000021965) #14	Ccdc65 (ENSMOCG00000000518) #15	Rnd1 (ENSMOCG00000015821) #16	Ddx23 (ENSMOCG00000018987) #17	Cacnb3 (ENSMOCG00000007254) #18	Adcy6 (ENSMOCG00000013100) #19	Tex49 (ENSMOCG00000022816) #20	Ccnt1 (ENSMOCG00000012712) #21	Kansl2 (ENSMOCG00000010801) #22	Lalba (ENSMOCG00000018652) #24	ENSMOCG00000009420 #27	ENSMOCG00000017621 #31	Zfp641 (ENSMOCG00000019174) #30	ENSMOCG00000001245 ##32	ENSMOCG00000001175 #32	Ccdc184 (ENSMOCG00000003788) #34	Asb8 (ENSMOCG00000017776) #35	Pfkm (ENSMOCG00000021333) #36	ENSMOCG00000015383	ENSMOCG00000002706 #37	Col2a1 (ENSMOCG00000014833)	Tmem106c (ENSMOCG00000016714)	ENSMOCG00000013472	Hdac7 (ENSMOCG00000019731)
Northern American deer mouse	MODERN SPECIES	12	ENSPEMG00000015247 #8	ENSPEMG00000015938 #8	Prkag1 (ENSPEMG00000015142) #9	Ddn (ENSPEMG00000010537) #10	Wnt1 (ENSPEMG00000024721) #11	Wnt10b (ENSPEMG00000015297) #12	Arf3 (ENSPEMG00000028616) #13	Fkbp11 (ENSPEMG00000009775) #14	Ccdc65 (ENSPEMG00000007520) #15	Rnd1 (ENSPEMG00000014224) #16	Ddx23 (ENSPEMG00000011305) #17	Cacnb3 (ENSPEMG00000014805) #18	Adcy6 (ENSPEMG00000009690) #19	Tex49 (ENSPEMG00000000495) #20	Ccnt1 (ENSPEMG00000016743) #21	Kansl2 (ENSPEMG00000008795) #22	Or11m3 (ENSPEMG00000024651) #23	Lalba (ENSPEMG00000007983) #24	ENSPEMG00000029296	Or8s8 (ENSPEMG00000030973) #25	Or8s10 (ENSPEMG00000027490) #26	ENSPEMG00000028993	Or8s2 (ENSPEMG00000026284) #28	Or8s5 (ENSPEMG00000026513) #29	ENSPEMG00000012906 ##28	Zfp641 (ENSPEMG00000026282) #30	ENSPEMG00000030364 ##32	ENSPEMG00000028880 #32	ENSPEMG00000026188 #32	Ccdc184 (ENSPEMG00000014959) #34	Asb8 (ENSPEMG00000026668) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1666	ENSNGAG00000012838 #8	ENSNGAG00000012125 #8	Prkag1 (ENSNGAG00000012811) #9	Ddn (ENSNGAG00000008326) #10	Wnt1 (ENSNGAG00000007571) #11	Wnt10b (ENSNGAG00000004862) #12	Arf3 (ENSNGAG00000015800) #13	ENSNGAG00000015440 #14	Ccdc65 (ENSNGAG00000008161) #15	Rnd1 (ENSNGAG00000001259) #16	Ddx23 (ENSNGAG00000019018) #17	Cacnb3 (ENSNGAG00000017756) #18	Adcy6 (ENSNGAG00000010902) #19	Tex49 (ENSNGAG00000008742) #20	Ccnt1 (ENSNGAG00000004672) #21	Kansl2 (ENSNGAG00000001029) #22	Or11m3 (ENSNGAG00000018584) #23	Lalba (ENSNGAG00000019393) #24	ENSNGAG00000014255 #27
Lesser Egyptian jerboa	MODERN SPECIES	157	ENSJJAG00000023190	ENSJJAG00000021738 #8	Prkag1 (ENSJJAG00000021260) #9	Ddn (ENSJJAG00000020419) #10	Wnt1 (ENSJJAG00000019856) #11	Wnt10b (ENSJJAG00000019751) #12	Arf3 (ENSJJAG00000019531) #13	Fkbp11 (ENSJJAG00000019024) #14	Ccdc65 (ENSJJAG00000018310) #15	Rnd1 (ENSJJAG00000018029) #16	Ddx23 (ENSJJAG00000018994) #17	Cacnb3 (ENSJJAG00000017876) #18	Adcy6 (ENSJJAG00000016023) #19	Tex49 (ENSJJAG00000014955) #20	Ccnt1 (ENSJJAG00000014633) #21	Kansl2 (ENSJJAG00000012644) #22	ENSJJAG00000013730	Lalba (ENSJJAG00000011329) #24	ENSJJAG00000003638 #27	ENSJJAG00000001609 ##28	Zfp641 (ENSJJAG00000023912) #30	ENSJJAG00000014189	ENSJJAG00000023686	Ccdc184 (ENSJJAG00000014181) #34	ENSJJAG00000023643 #35	Pfkm (ENSJJAG00000021525) #36	Senp1 (ENSJJAG00000015040) #37	Col2a1 (ENSJJAG00000019255)	ENSJJAG00000015566	ENSJJAG00000013784	Hdac7 (ENSJJAG00000021127)
Kangaroo rat	MODERN SPECIES	361	Rhebl1 (ENSDORG00000006513) #7	ENSDORG00000027776 #8	ENSDORG00000024758 #8	Prkag1 (ENSDORG00000006505) #9	Ddn (ENSDORG00000028862) #10	Wnt1 (ENSDORG00000007735) #11	Wnt10b (ENSDORG00000010403) #12	Arf3 (ENSDORG00000024681) #13	Ccdc65 (ENSDORG00000012748) #15	Rnd1 (ENSDORG00000023400) #16	Ddx23 (ENSDORG00000012659) #17	Cacnb3 (ENSDORG00000012657) #18	Adcy6 (ENSDORG00000005171) #19	Tex49 (ENSDORG00000023756) #20	Ccnt1 (ENSDORG00000002854) #21	Kansl2 (ENSDORG00000001180) #22	Lalba (ENSDORG00000009838) #24	ENSDORG00000002609 #27	ENSDORG00000025213 ##28	Zfp641 (ENSDORG00000011810) #30	ENSDORG00000027881 #32	ENSDORG00000027511 #32	Ccdc184 (ENSDORG00000000096) #34	Asb8 (ENSDORG00000027268) #35	Pfkm (ENSDORG00000000094) #36	Senp1 (ENSDORG00000000092) #37	Col2a1 (ENSDORG00000012020)	Tmem106c (ENSDORG00000012018)	ENSDORG00000027162	Hdac7 (ENSDORG00000016267)	Slc48a1 (ENSDORG00000026104)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000159881.a.a.b	ENSGT00390000014843	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00390000014843	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36	ENSGT00940000155489.b.f #37
Marmotini	ANCESTRAL SPECIES	19	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000159881.a.b.a	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.g #32	ENSGT01100000263574.a.h #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000159881.a.b.a	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162202.C ##28	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a.g #32	ENSGT01100000263574.a.h #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36
Arctic ground squirrel	MODERN SPECIES	348	DHH (ENSUPAG00010009573)	RHEBL1 (ENSUPAG00010009539) #7	PRKAG1 (ENSUPAG00010009337) #9	DDN (ENSUPAG00010009325) #10	WNT1 (ENSUPAG00010009320) #11	WNT10B (ENSUPAG00010009270) #12	ARF3 (ENSUPAG00010009256) #13	FKBP11 (ENSUPAG00010009234) #14	CCDC65 (ENSUPAG00010009212) #15	RND1 (ENSUPAG00010009175) #16	DDX23 (ENSUPAG00010009132) #17	CACNB3 (ENSUPAG00010008993) #18	ADCY6 (ENSUPAG00010008904) #19	TEX49 (ENSUPAG00010008891) #20	CCNT1 (ENSUPAG00010008871) #21	KANSL2 (ENSUPAG00010008805) #22	ENSUPAG00010008799	LALBA (ENSUPAG00010008774) #24	OR5BS1P (ENSUPAG00010008767)
Squirrel	MODERN SPECIES	112	RHEBL1 (ENSSTOG00000003967) #7	KMT2D (ENSSTOG00000003904) #8	PRKAG1 (ENSSTOG00000014648) #9	DDN (ENSSTOG00000028408) #10	WNT1 (ENSSTOG00000003902) #11	WNT10B (ENSSTOG00000004303) #12	ARF3 (ENSSTOG00000004295) #13	FKBP11 (ENSSTOG00000023089) #14	CCDC65 (ENSSTOG00000004267) #15	RND1 (ENSSTOG00000004257) #16	DDX23 (ENSSTOG00000004219) #17	CACNB3 (ENSSTOG00000004199) #18	ADCY6 (ENSSTOG00000004149) #19	TEX49 (ENSSTOG00000004134) #20	CCNT1 (ENSSTOG00000021508) #21	KANSL2 (ENSSTOG00000004118) #22	ENSSTOG00000019743 #23	LALBA (ENSSTOG00000033863) #24	ENSSTOG00000032648 #25	ENSSTOG00000033401	ENSSTOG00000005852 #27	ENSSTOG00000033341 ##28	ZNF641 (ENSSTOG00000001970) #30	OR10AD1 (ENSSTOG00000001963) #32	CCDC184 (ENSSTOG00000001957) #34	ASB8 (ENSSTOG00000024076) #35	PFKM (ENSSTOG00000001938) #36	SENP1 (ENSSTOG00000001924) #37	COL2A1 (ENSSTOG00000001893)	ENSSTOG00000033063	VDR (ENSSTOG00000026741)
Alpin marmot	MODERN SPECIES	34	DHH (ENSMMMG00000023054)	RHEBL1 (ENSMMMG00000023043) #7	ENSMMMG00000023038 #8	ENSMMMG00000023022 #8	ENSMMMG00000023013 #9	DDN (ENSMMMG00000023006) #10	WNT10B (ENSMMMG00000022992) #12	FKBP11 (ENSMMMG00000022980) #14	CCDC65 (ENSMMMG00000022974) #15	RND1 (ENSMMMG00000022971) #16	DDX23 (ENSMMMG00000022958) #17	CACNB3 (ENSMMMG00000022935) #18	ADCY6 (ENSMMMG00000022920) #19	TEX49 (ENSMMMG00000022917) #20	CCNT1 (ENSMMMG00000022910) #21	KANSL2 (ENSMMMG00000022904) #22	LALBA (ENSMMMG00000022893) #24	OR5BS1P (ENSMMMG00000022891)	ENSMMMG00000022889 #25	ENSMMMG00000022886	ENSMMMG00000022885 #28	ENSMMMG00000022881 #29	ENSMMMG00000022878 ##28	ZNF641 (ENSMMMG00000022873) #30	H1-7 (ENSMMMG00000022871) #31	ENSMMMG00000022868 #32	ENSMMMG00000022866 #32	CCDC184 (ENSMMMG00000022863) #34	ASB8 (ENSMMMG00000022857) #35	PFKM (ENSMMMG00000022833) #36	SENP1 (ENSMMMG00000022823) #37
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005013789 #8	ENSSVLG00005013748 #8	PRKAG1 (ENSSVLG00005013661) #9	DDN (ENSSVLG00005013335) #10	WNT1 (ENSSVLG00005013249) #11	WNT10B (ENSSVLG00005013159) #12	ARF3 (ENSSVLG00005012987) #13	FKBP11 (ENSSVLG00005012794) #14	CCDC65 (ENSSVLG00005012567) #15	RND1 (ENSSVLG00005012510) #16	DDX23 (ENSSVLG00005012479) #17	CACNB3 (ENSSVLG00005012131) #18	ADCY6 (ENSSVLG00005011914) #19	TEX49 (ENSSVLG00005011832) #20	CCNT1 (ENSSVLG00005011525) #21	KANSL2 (ENSSVLG00005011410) #22	ENSSVLG00005011395	ENSSVLG00005011295	LALBA (ENSSVLG00005011187) #24	OR5BS1P (ENSSVLG00005011139)	C12orf54 (ENSSVLG00005011007)	ENSSVLG00005010951 #28	ZNF641 (ENSSVLG00005010861) #30	H1-7 (ENSSVLG00005010817) #31	OR10AD1 (ENSSVLG00005010756) #32	CCDC184 (ENSSVLG00005010675) #34	ASB8 (ENSSVLG00005010618) #35	PFKM (ENSSVLG00005010346) #36	SENP1 (ENSSVLG00005010219) #37	COL2A1 (ENSSVLG00005009560)	TMEM106C (ENSSVLG00005009433)
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000159881.a.a.b	ENSGT00390000014843	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162121 #30	ENSGT00730000111596 #31	ENSGT01100000263574.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36	ENSGT00940000155489.b.f #37
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808 #22	ENSGT00940000165147 #23	ENSGT00940000161726 #24	ENSGT00940000163803	ENSGT00940000162388.B #25	ENSGT00940000159881.a.a.b	ENSGT00940000164920 #27	ENSGT00390000014843	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162121 #30	ENSGT01100000263574.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36	ENSGT00940000155489.b.f #37
Hystricomorpha_b	DUPLICATION
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000161665 #7	ENSGT00940000156707 #8	ENSGT00950000183019.f.b.a #9	ENSGT00390000016495 #10	ENSGT00940000160329 #11	ENSGT00940000160653 #12	ENSGT00950000183080.a.a #13	ENSGT00940000159521 #14	ENSGT00940000153804.B #15	ENSGT00940000158666 #16	ENSGT00940000155606.b #17	ENSGT00950000182837.b.a #18	ENSGT00940000155687 #19	ENSGT00390000010327 #20	ENSGT00940000159544 #21	ENSGT00940000155808.c #22	ENSGT00940000161726 #24	ENSGT00940000164920 #27	ENSGT00390000014843	ENSGT00940000162202.A #28	ENSGT00940000162202.B #29	ENSGT00940000162121 #30	ENSGT01100000263574.a #32	ENSGT00390000002978 #34	ENSGT00940000159366 #35	ENSGT00940000155440.d #36	ENSGT00940000155489.b.f #37	ENSGT00940000155224	ENSGT00940000161281	ENSGT00940000155473	ENSGT00940000159065
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	163	ENSODEG00000006647	ENSODEG00000005907	ENSODEG00000006393	NUFIP1 (ENSODEG00000006473)	ENSODEG00000005705	ENSODEG00000006384	SERP2 (ENSODEG00000007267)	ENSODEG00000005627	LACC1 (ENSODEG00000005776)	CCDC122 (ENSODEG00000005141)	ENOX1 (ENSODEG00000005302)	ENSODEG00000019241	ENSODEG00000006181	FAM216B (ENSODEG00000005625)	TNFSF11 (ENSODEG00000006356)	ENSODEG00000006486 #22	ENSODEG00000006660	ENSODEG00000006233	SHMT1 (ENSODEG00000007205)	SMCR8 (ENSODEG00000007558)	ENSODEG00000005229	ENSODEG00000005602	FLII (ENSODEG00000007385)	LLGL1 (ENSODEG00000006178)	ALKBH5 (ENSODEG00000005760)	MYO15A (ENSODEG00000006663)	DRG2 (ENSODEG00000006901)	GID4 (ENSODEG00000006263)	ATPAF2 (ENSODEG00000006425)	DRC3 (ENSODEG00000006302)	TOM1L2 (ENSODEG00000006067)
Degu	MODERN SPECIES	141	ENSODEG00000004064 #8	ENSODEG00000004046 #9	DDN (ENSODEG00000004034) #10	WNT1 (ENSODEG00000004027) #11	WNT10B (ENSODEG00000004020) #12	ARF3 (ENSODEG00000004009) #13	FKBP11 (ENSODEG00000003672) #14	CCDC65 (ENSODEG00000003640) #15	RND1 (ENSODEG00000003618) #16	DDX23 (ENSODEG00000003592) #17	CACNB3 (ENSODEG00000003562) #18	ADCY6 (ENSODEG00000003474) #19	ENSODEG00000003445	TEX49 (ENSODEG00000003431) #20	ENSODEG00000003425 #21	ENSODEG00000003381 #22	LALBA (ENSODEG00000003342) #24	ENSODEG00000003309 #27	ENSODEG00000003293 #28	ZNF641 (ENSODEG00000003266) #30	ENSODEG00000003244	ENSODEG00000003231	CCDC184 (ENSODEG00000019270) #34	ASB8 (ENSODEG00000004323) #35	PFKM (ENSODEG00000004315) #36	SENP1 (ENSODEG00000004260) #37	COL2A1 (ENSODEG00000004221)	TMEM106C (ENSODEG00000004196)	ENSODEG00000004180	HDAC7 (ENSODEG00000003964)	SLC48A1 (ENSODEG00000003853)
Degu	MODERN SPECIES	218																ENSODEG00000002814 #22	CRHBP (ENSODEG00000002524)	S100Z (ENSODEG00000002505)	F2RL1 (ENSODEG00000002463)	ENSODEG00000003730	IQGAP2 (ENSODEG00000003459)	SV2C (ENSODEG00000003155)	POC5 (ENSODEG00000003014)	ANKDD1B (ENSODEG00000003019)	POLK (ENSODEG00000002687)	CERT1 (ENSODEG00000002483)	HMGCR (ENSODEG00000003319)	ANKRD31 (ENSODEG00000003017)	GCNT4 (ENSODEG00000018869)	ENSODEG00000002941	FAM169A (ENSODEG00000002906)
Long-tailed chinchilla	MODERN SPECIES	207	RHEBL1 (ENSCLAG00000002358) #7	KMT2D (ENSCLAG00000003665) #8	PRKAG1 (ENSCLAG00000003459) #9	DDN (ENSCLAG00000003076) #10	WNT1 (ENSCLAG00000002943) #11	WNT10B (ENSCLAG00000002817) #12	ARF3 (ENSCLAG00000003101) #13	ENSCLAG00000003008 #14	CCDC65 (ENSCLAG00000002533) #15	RND1 (ENSCLAG00000003094) #16	DDX23 (ENSCLAG00000002986) #17	CACNB3 (ENSCLAG00000002138) #18	ADCY6 (ENSCLAG00000003898) #19	TEX49 (ENSCLAG00000003509) #20	CCNT1 (ENSCLAG00000003430) #21	ENSCLAG00000003022 #22	LALBA (ENSCLAG00000002878) #24	ENSCLAG00000017542 #25	C12orf54 (ENSCLAG00000002462)	ENSCLAG00000017498 #28	ENSCLAG00000002661 #29	ZNF641 (ENSCLAG00000002291) #30	OR10AD1 (ENSCLAG00000002006) #32	CCDC184 (ENSCLAG00000017612) #34	ASB8 (ENSCLAG00000003759) #35	PFKM (ENSCLAG00000003014) #36	SENP1 (ENSCLAG00000015346) #37	COL2A1 (ENSCLAG00000011781)	TMEM106C (ENSCLAG00000008066)	VDR (ENSCLAG00000007173)	HDAC7 (ENSCLAG00000003217)
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00940000155808.d #22
Long-tailed chinchilla	MODERN SPECIES	116	COCH (ENSCLAG00000011067)	SCFD1 (ENSCLAG00000012279)	G2E3 (ENSCLAG00000008721)	PRKD1 (ENSCLAG00000011245)	FOXG1 (ENSCLAG00000011906)	ENSCLAG00000015104	NOVA1 (ENSCLAG00000008948)	STXBP6 (ENSCLAG00000009408)	ENSCLAG00000010055	GZMH (ENSCLAG00000010860)	ENSCLAG00000010208	ENSCLAG00000010184	ENSCLAG00000010999	ENSCLAG00000011419	ENSCLAG00000014113	ENSCLAG00000016004 #22	SDR39U1 (ENSCLAG00000016061)	KHNYN (ENSCLAG00000014539)	CBLN3 (ENSCLAG00000012641)	NYNRIN (ENSCLAG00000009622)	NFATC4 (ENSCLAG00000011705)	RIPK3 (ENSCLAG00000013944)	ADCY4 (ENSCLAG00000015310)	LTB4R (ENSCLAG00000017796)	LTB4R2 (ENSCLAG00000009760)	NOP9 (ENSCLAG00000010413)	CIDEB (ENSCLAG00000010552)	DHRS1 (ENSCLAG00000013144)	TGM1 (ENSCLAG00000016198)	TINF2 (ENSCLAG00000011262)	GMPR2 (ENSCLAG00000012081)
Guinea pig	MODERN SPECIES	9	RHEBL1 (ENSCPOG00000002998) #7	KMT2D (ENSCPOG00000002973) #8	PRKAG1 (ENSCPOG00000002966) #9	DDN (ENSCPOG00000002960) #10	WNT1 (ENSCPOG00000024490) #11	WNT10B (ENSCPOG00000035034) #12	ARF3 (ENSCPOG00000040787) #13	FKBP11 (ENSCPOG00000031801) #14	CCDC65 (ENSCPOG00000003221) #15	RND1 (ENSCPOG00000003220) #16	DDX23 (ENSCPOG00000003278) #17	CACNB3 (ENSCPOG00000003277) #18	ADCY6 (ENSCPOG00000030377) #19	TEX49 (ENSCPOG00000030293) #20	CCNT1 (ENSCPOG00000038705) #21	KANSL2 (ENSCPOG00000005760) #22	ENSCPOG00000024843 #23	Lalba (ENSCPOG00000027342) #24	ENSCPOG00000033889	ENSCPOG00000000012	ENSCPOG00000013910 #25	ENSCPOG00000039913	ENSCPOG00000040584 #27	ENSCPOG00000012475 #28	ENSCPOG00000036505 #29	ZNF641 (ENSCPOG00000002770) #30	ENSCPOG00000012386 #32	ENSCPOG00000030096 #32	CCDC184 (ENSCPOG00000008369) #34	ASB8 (ENSCPOG00000030353) #35	PFKM (ENSCPOG00000008351) #36
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000050567 #8	PRKAG1 (ENSHGLG00000003937) #9	DDN (ENSHGLG00000004151) #10	WNT1 (ENSHGLG00000004305) #11	WNT10B (ENSHGLG00000005760) #12	ARF3 (ENSHGLG00000050677) #13	FKBP11 (ENSHGLG00000008146) #14	CCDC65 (ENSHGLG00000003786) #15	ENSHGLG00000048199	RND1 (ENSHGLG00000004112) #16	DDX23 (ENSHGLG00000004292) #17	CACNB3 (ENSHGLG00000007792) #18	ADCY6 (ENSHGLG00000004662) #19	TEX49 (ENSHGLG00000007195) #20	ENSHGLG00000003361 #21	ENSHGLG00000003714 #22	ENSHGLG00000033115	ENSHGLG00000050339	ENSHGLG00000004311 #24	OR5BS1P (ENSHGLG00000042484)	ENSHGLG00000020586	ENSHGLG00000020517 #25	ENSHGLG00000047106	ENSHGLG00000036300 #28	ENSHGLG00000034108 #29	ENSHGLG00000047797 ##28	ZNF641 (ENSHGLG00000048585) #30	ENSHGLG00000033180 #31	ENSHGLG00000046091	ENSHGLG00000037629 #32	OR10AD1 (ENSHGLG00000045918) #32
Naked mole-rat female	MODERN SPECIES	10	SYDE2 (ENSHGLG00000005398)	ENSHGLG00000039413	C1orf52 (ENSHGLG00000004452)	BCL10 (ENSHGLG00000004369)	ENSHGLG00000041300	ENSHGLG00000033883	DDAH1 (ENSHGLG00000047230)	CCN1 (ENSHGLG00000007980)	ZNHIT6 (ENSHGLG00000007009)	ENSHGLG00000036484	COL24A1 (ENSHGLG00000004244)	ENSHGLG00000010829	CLCA2 (ENSHGLG00000015413)	CLCA1 (ENSHGLG00000015470)	ENSHGLG00000037078	ENSHGLG00000015121 #22	ENSHGLG00000012115	ENSHGLG00000035709	ENSHGLG00000007822	ENSHGLG00000006117	SELENOF (ENSHGLG00000044599)	HS2ST1 (ENSHGLG00000008512)	LMO4 (ENSHGLG00000038005)	PKN2 (ENSHGLG00000006153)	GTF2B (ENSHGLG00000045614)	CCBL2 (ENSHGLG00000004456)	GBP1 (ENSHGLG00000008509)	ENSHGLG00000006893	ENSHGLG00000005453	ENSHGLG00000007998	ENSHGLG00000009330