Euteleostomi ANCESTRAL SPECIES ENSGT00940000164461 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000160575 ENSGT00390000002395 ENSGT00940000161261 ENSGT00940000163955 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 Sarcopterygii ANCESTRAL SPECIES 2 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000179958 ENSGT00940000156021 ENSGT00940000163955 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Tetrapoda ANCESTRAL SPECIES 3 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Amniota ANCESTRAL SPECIES 2 ENSGT00940000164461 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Mammalia ANCESTRAL SPECIES 1 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Theria ANCESTRAL SPECIES 6 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Eutheria ANCESTRAL SPECIES 2 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Primates ANCESTRAL SPECIES 10 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Haplorrhini ANCESTRAL SPECIES 23 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Simiiformes ANCESTRAL SPECIES 10 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Catarrhini ANCESTRAL SPECIES 14 ENSGT00390000013264.d.f ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00390000013770.d ENSGT00940000158757 ENSGT01060000248700 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000155193.a.a.f.b ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Rhinopithecus ANCESTRAL SPECIES 326 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000160280 ENSGT01050000244924.a.a.b #23 ENSGT00940000154739.B ENSGT00940000160580 ENSGT00940000162457 ENSGT00940000161332 ENSGT00940000157113 ENSGT00940000161721 ENSGT00390000008060 ENSGT00940000156523.b ENSGT00940000159142 Golden snub-nosed monkey MODERN SPECIES 608 ENSRROG00000026856 #15 NMU (ENSRROG00000035516) #16 PDCL2 (ENSRROG00000022806) #17 CLOCK (ENSRROG00000035477) #18 ENSRROG00000015323 #19 TMEM165 (ENSRROG00000041302) #20 SRD5A3 (ENSRROG00000032095) #21 KDR (ENSRROG00000036156) #22 ENSRROG00000021572 #23 Black snub-nosed monkey MODERN SPECIES 507 TMEM71 (ENSRBIG00000034797) PHF20L1 (ENSRBIG00000043926) SLA (ENSRBIG00000027623) TG (ENSRBIG00000034977) CCN4 (ENSRBIG00000038011) NDRG1 (ENSRBIG00000044999) ST3GAL1 (ENSRBIG00000031292) EXOC1 (ENSRBIG00000041634) EXOC1L (ENSRBIG00000027915) ENSRBIG00000025802 #15 NMU (ENSRBIG00000000139) #16 PDCL2 (ENSRBIG00000042204) #17 CLOCK (ENSRBIG00000041151) #18 TMEM165 (ENSRBIG00000035652) #20 SRD5A3 (ENSRBIG00000032854) #21 KDR (ENSRBIG00000012786) #22 ENSRBIG00000007193 #23 NCAM2 (ENSRBIG00000031975) ENSRBIG00000034492 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000155193.a.a.f.b ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000154433.a.b.l.a ##15 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Vervet Monkey MODERN SPECIES 26 ARL9 (ENSCSAG00000005100) SRP72 (ENSCSAG00000005079) PPAT (ENSCSAG00000005060) ENSCSAG00000000425 AASDH (ENSCSAG00000005057) ENSCSAG00000005053 CRACD (ENSCSAG00000005049) CEP135 (ENSCSAG00000005042) EXOC1 (ENSCSAG00000005038) NMU (ENSCSAG00000005030) #16 ENSCSAG00000000424 ##15 PDCL2 (ENSCSAG00000005023) #17 CLOCK (ENSCSAG00000005019) #18 TMEM165 (ENSCSAG00000005013) #20 SRD5A3 (ENSCSAG00000005010) #21 KDR (ENSCSAG00000005005) #22 ENSCSAG00000004997 KIT (ENSCSAG00000004992) PDGFRA (ENSCSAG00000004987) GSX2 (ENSCSAG00000004981) LNX1 (ENSCSAG00000004979) ENSCSAG00000004975 SCFD2 (ENSCSAG00000004970) RASL11B (ENSCSAG00000004968) ERVMER34-1 (ENSCSAG00000000423) USP46 (ENSCSAG00000004963) SPATA18 (ENSCSAG00000004960) SGCB (ENSCSAG00000004955) LRRC66 (ENSCSAG00000004952) DCUN1D4 (ENSCSAG00000004948) UGT2B4 (ENSCSAG00000004947) Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000154433.a.b.l.a ##15 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00910000147676 ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00390000013264.d.f ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000154433.a.b.l.a ##15 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00910000147676 ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 Olive baboon MODERN SPECIES 13 PAICS (ENSPANG00000017692) PPAT (ENSPANG00000012149) AASDH (ENSPANG00000018913) CRACD (ENSPANG00000006883) ENSPANG00000033113 CEP135 (ENSPANG00000007654) EXOC1 (ENSPANG00000009817) EXOC1L (ENSPANG00000049134) ENSPANG00000039918 ENSPANG00000040931 NMU (ENSPANG00000024021) #16 PDCL2 (ENSPANG00000007651) #17 CLOCK (ENSPANG00000006882) #18 TMEM165 (ENSPANG00000008925) #20 SRD5A3 (ENSPANG00000023285) #21 KDR (ENSPANG00000009816) #22 KIT (ENSPANG00000025525) PDGFRA (ENSPANG00000021718) GSX2 (ENSPANG00000021441) CHIC2 (ENSPANG00000019862) LNX1 (ENSPANG00000012441) ENSPANG00000011213 ENSPANG00000047571 SCFD2 (ENSPANG00000017814) RASL11B (ENSPANG00000038411) ENSPANG00000041881 ENSPANG00000042571 ERVMER34-1 (ENSPANG00000039612) USP46 (ENSPANG00000008485) ENSPANG00000040500 SPATA18 (ENSPANG00000009236) Cercopithecinae_d ANCESTRAL SPECIES 124 ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00390000003248.a.a.a.b ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000154433.a.b.l.a ##15 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000154509 ENSGT00390000004690.a.b.h ENSGT00940000156043 ENSGT00390000003601.b ENSGT00910000147421 ENSGT00390000013770.d ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00910000147676 ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a Drill MODERN SPECIES 1090 ENSMLEG00000016421 CEP135 (ENSMLEG00000042514) EXOC1 (ENSMLEG00000031006) EXOC1L (ENSMLEG00000012366) NMU (ENSMLEG00000001068) #16 ENSMLEG00000033206 ##15 PDCL2 (ENSMLEG00000032563) #17 CLOCK (ENSMLEG00000032159) #18 ENSMLEG00000026848 #19 TMEM165 (ENSMLEG00000036618) #20 SRD5A3 (ENSMLEG00000036587) #21 KDR (ENSMLEG00000038992) #22 KIT (ENSMLEG00000040087) DCAF1 (ENSMLEG00000030256) ENSMLEG00000029304 MANF (ENSMLEG00000038782) DOCK3 (ENSMLEG00000040761) Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 415 ENSCATG00000037103 ENSCATG00000032416 ENSCATG00000029296 PRSS50 (ENSCATG00000039179) TMIE (ENSCATG00000040756) ALS2CL (ENSCATG00000039468) FAM240A (ENSCATG00000036448) ENSCATG00000032934 LRRC2 (ENSCATG00000035877) RTP3 (ENSCATG00000033415) LTF (ENSCATG00000041258) CCRL2 (ENSCATG00000043945) CCR5 (ENSCATG00000040951) CCR2 (ENSCATG00000045319) CCR3 (ENSCATG00000037322) ENSCATG00000031966 #22 XCR1 (ENSCATG00000014396) CXCR6 (ENSCATG00000032900) FYCO1 (ENSCATG00000032074) CCR9 (ENSCATG00000043777) LZTFL1 (ENSCATG00000026990) SLC6A20 (ENSCATG00000039108) SACM1L (ENSCATG00000041323) LIMD1 (ENSCATG00000044147) LARS2 (ENSCATG00000016502) TMEM158 (ENSCATG00000010127) CDCP1 (ENSCATG00000043132) CLEC3B (ENSCATG00000010007) EXOSC7 (ENSCATG00000036675) ZDHHC3 (ENSCATG00000038883) TGM4 (ENSCATG00000038831) Sooty mangabey MODERN SPECIES 180 PPAT (ENSCATG00000000386) AASDH (ENSCATG00000009332) CRACD (ENSCATG00000034559) ENSCATG00000020059 CEP135 (ENSCATG00000012612) EXOC1 (ENSCATG00000043473) EXOC1L (ENSCATG00000029322) NMU (ENSCATG00000000632) #16 ENSCATG00000040815 ##15 PDCL2 (ENSCATG00000041890) #17 CLOCK (ENSCATG00000002646) #18 ENSCATG00000017377 #19 TMEM165 (ENSCATG00000036895) #20 SRD5A3 (ENSCATG00000040052) #21 ENSCATG00000035741 KDR (ENSCATG00000026660) #22 KIT (ENSCATG00000004601) PDGFRA (ENSCATG00000018830) ENSCATG00000038972 ENSCATG00000036558 GSX2 (ENSCATG00000039825) CHIC2 (ENSCATG00000041345) ENSCATG00000038682 LNX1 (ENSCATG00000030273) ENSCATG00000041740 SCFD2 (ENSCATG00000043635) RASL11B (ENSCATG00000035296) USP46 (ENSCATG00000011235) ENSCATG00000020254 ENSCATG00000036801 SPATA18 (ENSCATG00000039449) Macaca ANCESTRAL SPECIES 26 ENSGT00390000013264.d.f ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000154433.a.b.l.a ##15 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00910000147676 ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 563 ENSMNEG00000032092 ENSMNEG00000027522 PRSS50 (ENSMNEG00000042941) TMIE (ENSMNEG00000042868) ALS2CL (ENSMNEG00000009972) FAM240A (ENSMNEG00000029468) ENSMNEG00000043098 ENSMNEG00000033522 LRRC2 (ENSMNEG00000031142) RTP3 (ENSMNEG00000041456) LTF (ENSMNEG00000037556) CCRL2 (ENSMNEG00000028555) CCR5 (ENSMNEG00000030563) CCR2 (ENSMNEG00000042415) CCR3 (ENSMNEG00000045293) ENSMNEG00000032954 #22 XCR1 (ENSMNEG00000026451) CXCR6 (ENSMNEG00000036699) FYCO1 (ENSMNEG00000012869) CCR9 (ENSMNEG00000028947) LZTFL1 (ENSMNEG00000045295) SLC6A20 (ENSMNEG00000042331) SACM1L (ENSMNEG00000033463) LIMD1 (ENSMNEG00000041955) LARS2 (ENSMNEG00000031043) TMEM158 (ENSMNEG00000013143) CDCP1 (ENSMNEG00000033344) CLEC3B (ENSMNEG00000030556) EXOSC7 (ENSMNEG00000041567) ZDHHC3 (ENSMNEG00000030523) TGM4 (ENSMNEG00000043309) Pig-tailed macaque MODERN SPECIES 306 ENSMNEG00000038065 PAICS (ENSMNEG00000044037) PPAT (ENSMNEG00000040243) AASDH (ENSMNEG00000041209) CRACD (ENSMNEG00000037712) ENSMNEG00000029915 CEP135 (ENSMNEG00000032627) EXOC1 (ENSMNEG00000030837) EXOC1L (ENSMNEG00000036784) ENSMNEG00000043005 ##15 NMU (ENSMNEG00000036198) #16 PDCL2 (ENSMNEG00000036647) #17 CLOCK (ENSMNEG00000031474) #18 TMEM165 (ENSMNEG00000029130) #20 SRD5A3 (ENSMNEG00000031682) #21 KDR (ENSMNEG00000042884) #22 KIT (ENSMNEG00000033149) PDGFRA (ENSMNEG00000034868) ENSMNEG00000042355 GSX2 (ENSMNEG00000036971) ENSMNEG00000034287 CHIC2 (ENSMNEG00000028920) RBM46 (ENSMNEG00000002787) LRAT (ENSMNEG00000014904) FGG (ENSMNEG00000038909) ENSMNEG00000034578 FGB (ENSMNEG00000036263) PLRG1 (ENSMNEG00000042073) ENSMNEG00000045502 SFRP2 (ENSMNEG00000038959) RNF175 (ENSMNEG00000040105) Macaca_a ANCESTRAL SPECIES 12 ENSGT00940000159397 ENSGT00390000013264.d.f ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00980000202055.A.b.a ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Rhesus MODERN SPECIES 15 ARL9 (ENSMMUG00000052194) SRP72 (ENSMMUG00000016368) PAICS (ENSMMUG00000016366) PPAT (ENSMMUG00000016362) ENSMMUG00000055013 AASDH (ENSMMUG00000016360) CRACD (ENSMMUG00000016358) CEP135 (ENSMMUG00000009925) EXOC1 (ENSMMUG00000023427) EXOC1L (ENSMMUG00000039297) NMU (ENSMMUG00000043692) #16 PDCL2 (ENSMMUG00000006271) #17 CLOCK (ENSMMUG00000001919) #18 TMEM165 (ENSMMUG00000001918) #20 SRD5A3 (ENSMMUG00000010113) #21 KDR (ENSMMUG00000012669) #22 KIT (ENSMMUG00000060342) ENSMMUG00000060048 ENSMMUG00000059659 PDGFRA (ENSMMUG00000017395) GSX2 (ENSMMUG00000048263) CHIC2 (ENSMMUG00000050730) LNX1 (ENSMMUG00000017401) SCFD2 (ENSMMUG00000017393) RASL11B (ENSMMUG00000052882) ENSMMUG00000059074 ERVMER34-1 (ENSMMUG00000007951) USP46 (ENSMMUG00000023333) SPATA18 (ENSMMUG00000018943) LRRC66 (ENSMMUG00000018939) DCUN1D4 (ENSMMUG00000008579) Crab-eating macaque MODERN SPECIES 15 SRP72 (ENSMFAG00000031065) ENSMFAG00000064316 PAICS (ENSMFAG00000033255) PPAT (ENSMFAG00000041933) AASDH (ENSMFAG00000033449) CRACD (ENSMFAG00000001807) CEP135 (ENSMFAG00000032993) EXOC1 (ENSMFAG00000040087) EXOC1L (ENSMFAG00000056471) NMU (ENSMFAG00000040660) #16 PDCL2 (ENSMFAG00000001261) #17 CLOCK (ENSMFAG00000043377) #18 TMEM165 (ENSMFAG00000034541) #20 ENSMFAG00000064599 ENSMFAG00000059515 KDR (ENSMFAG00000043201) #22 KIT (ENSMFAG00000041033) PDGFRA (ENSMFAG00000046187) GSX2 (ENSMFAG00000038491) ENSMFAG00000054734 CHIC2 (ENSMFAG00000035340) ENSMFAG00000058181 ENSMFAG00000062722 ENSMFAG00000049605 LNX1 (ENSMFAG00000000338) FIP1L1 (ENSMFAG00000034699) SCFD2 (ENSMFAG00000042186) ENSMFAG00000058674 ENSMFAG00000059603 RASL11B (ENSMFAG00000037233) ENSMFAG00000047996 Hominoidea ANCESTRAL SPECIES 10 ENSGT00390000013264.d.f.b ENSGT00390000010172.s ENSGT00390000003428.w ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00910000147929 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00390000013770.d ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Gibbon MODERN SPECIES 24 ENSNLEG00000034401 SRP72 (ENSNLEG00000008806) PAICS (ENSNLEG00000008786) PPAT (ENSNLEG00000008762) AASDH (ENSNLEG00000008681) CRACD (ENSNLEG00000008674) ENSNLEG00000036094 CEP135 (ENSNLEG00000008640) EXOC1 (ENSNLEG00000008574) EXOC1L (ENSNLEG00000032675) NMU (ENSNLEG00000008552) #16 PDCL2 (ENSNLEG00000008545) #17 CLOCK (ENSNLEG00000008499) #18 TMEM165 (ENSNLEG00000008484) #20 SRD5A3 (ENSNLEG00000032360) #21 KDR (ENSNLEG00000008365) #22 KIT (ENSNLEG00000008295) PDGFRA (ENSNLEG00000008285) ENSNLEG00000030233 GSX2 (ENSNLEG00000008278) ENSNLEG00000029752 LNX1 (ENSNLEG00000008256) FIP1L1 (ENSNLEG00000008187) SCFD2 (ENSNLEG00000008185) RASL11B (ENSNLEG00000008176) ERVMER34-1 (ENSNLEG00000018485) USP46 (ENSNLEG00000008161) SPATA18 (ENSNLEG00000008151) SGCB (ENSNLEG00000031021) LRRC66 (ENSNLEG00000008139) DCUN1D4 (ENSNLEG00000033951) Hominidae ANCESTRAL SPECIES 12 ENSGT00390000013264.d.f.b ENSGT00390000010172.s ENSGT00390000003428.w ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00910000147929 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00390000013770.d ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Orangutan MODERN SPECIES 17 ARL9 (ENSPPYG00000014751) SRP72 (ENSPPYG00000014752) PAICS (ENSPPYG00000014753) PPAT (ENSPPYG00000029568) ENSPPYG00000036324 AASDH (ENSPPYG00000014755) CRACD (ENSPPYG00000014756) ENSPPYG00000014757 EXOC1 (ENSPPYG00000014758) EXOC1L (ENSPPYG00000014759) NMU (ENSPPYG00000014760) #16 PDCL2 (ENSPPYG00000014761) #17 CLOCK (ENSPPYG00000014762) #18 TMEM165 (ENSPPYG00000014763) #20 SRD5A3 (ENSPPYG00000014764) #21 KDR (ENSPPYG00000014765) #22 KIT (ENSPPYG00000014766) PDGFRA (ENSPPYG00000014767) GSX2 (ENSPPYG00000014769) CHIC2 (ENSPPYG00000014770) LNX1 (ENSPPYG00000014772) FIP1L1 (ENSPPYG00000014773) SCFD2 (ENSPPYG00000014774) RASL11B (ENSPPYG00000037548) ERVMER34-1 (ENSPPYG00000014776) USP46 (ENSPPYG00000014777) SPATA18 (ENSPPYG00000014779) SGCB (ENSPPYG00000014780) LRRC66 (ENSPPYG00000014781) DCUN1D4 (ENSPPYG00000014782) YTHDC1 (ENSPPYG00000014726) Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00390000013264.d.f.b ENSGT00390000010172.s ENSGT00390000003428.w ENSGT00910000148425 ENSGT00440000033811 ENSGT00940000161471 ENSGT00910000147929 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00390000013770.d ENSGT00940000158757 ENSGT01080000257472 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 Gorilla MODERN SPECIES 17 ENSGGOG00000006178 SRP72 (ENSGGOG00000013234) PAICS (ENSGGOG00000024392) PPAT (ENSGGOG00000004608) AASDH (ENSGGOG00000023372) CRACD (ENSGGOG00000001148) ENSGGOG00000043121 CEP135 (ENSGGOG00000003682) EXOC1 (ENSGGOG00000026473) EXOC1L (ENSGGOG00000038477) NMU (ENSGGOG00000007920) #16 PDCL2 (ENSGGOG00000007908) #17 CLOCK (ENSGGOG00000005753) #18 TMEM165 (ENSGGOG00000015618) #20 SRD5A3 (ENSGGOG00000022870) #21 KDR (ENSGGOG00000012821) #22 KIT (ENSGGOG00000015440) ENSGGOG00000026556 PDGFRA (ENSGGOG00000010615) GSX2 (ENSGGOG00000007928) ENSGGOG00000039849 CHIC2 (ENSGGOG00000027084) ENSGGOG00000010061 LNX1 (ENSGGOG00000010056) FIP1L1 (ENSGGOG00000006427) SCFD2 (ENSGGOG00000012209) RASL11B (ENSGGOG00000012197) ERVMER34-1 (ENSGGOG00000039041) USP46 (ENSGGOG00000017197) ENSGGOG00000024859 SPATA18 (ENSGGOG00000008496) Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00390000013264.d.f.b ENSGT00390000010172.s ENSGT00390000003428.w ENSGT00910000148425 ENSGT00440000033811 ENSGT00940000161471 ENSGT00910000147929 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00390000013770.d ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Human MODERN SPECIES 16 ARL9 (ENSG00000196503) SRP72 (ENSG00000174780) PAICS (ENSG00000128050) PPAT (ENSG00000128059) AASDH (ENSG00000157426) CRACD (ENSG00000109265) CEP135 (ENSG00000174799) EXOC1 (ENSG00000090989) EXOC1L (ENSG00000250821) NMU (ENSG00000109255) #16 PDCL2 (ENSG00000163440) #17 CLOCK (ENSG00000134852) #18 TMEM165 (ENSG00000134851) #20 ENSG00000288695 SRD5A3 (ENSG00000128039) #21 KDR (ENSG00000128052) #22 KIT (ENSG00000157404) PDGFRA (ENSG00000134853) GSX2 (ENSG00000180613) CHIC2 (ENSG00000109220) LNX1 (ENSG00000072201) ENSG00000282278 FIP1L1 (ENSG00000145216) SCFD2 (ENSG00000184178) RASL11B (ENSG00000128045) ERVMER34-1 (ENSG00000226887) USP46 (ENSG00000109189) SPATA18 (ENSG00000163071) SGCB (ENSG00000163069) LRRC66 (ENSG00000188993) DCUN1D4 (ENSG00000109184) Pan ANCESTRAL SPECIES 7 ENSGT00390000013264.d.f.b ENSGT00390000010172.s ENSGT00390000003428.w ENSGT00910000148425 ENSGT00440000033811 ENSGT00940000161471 ENSGT00910000147929 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00950000182965.a.b.b.a ENSGT00390000003601.b ENSGT00390000013770.d ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 Bonobo DUPLICATION Bonobo MODERN SPECIES 16 ENSPPAG00000024161 ENSPPAG00000038023 PRSS50 (ENSPPAG00000003698) ENSPPAG00000031194 ALS2CL (ENSPPAG00000029581) TDGF1 (ENSPPAG00000030716) ENSPPAG00000027613 LRRC2 (ENSPPAG00000038052) RTP3 (ENSPPAG00000042328) LTF (ENSPPAG00000020269) CCRL2 (ENSPPAG00000015452) CCR5 (ENSPPAG00000004216) CCR2 (ENSPPAG00000009840) CCR3 (ENSPPAG00000026316) CCR1 (ENSPPAG00000025057) ENSPPAG00000030971 #22 XCR1 (ENSPPAG00000008050) CXCR6 (ENSPPAG00000007482) FYCO1 (ENSPPAG00000030354) CCR9 (ENSPPAG00000042825) LZTFL1 (ENSPPAG00000006611) SLC6A20 (ENSPPAG00000033865) SACM1L (ENSPPAG00000004828) LIMD1 (ENSPPAG00000023908) LARS2 (ENSPPAG00000037972) CDCP1 (ENSPPAG00000036832) CLEC3B (ENSPPAG00000032614) EXOSC7 (ENSPPAG00000043557) ZDHHC3 (ENSPPAG00000030337) TGM4 (ENSPPAG00000040609) TMEM42 (ENSPPAG00000042423) Bonobo MODERN SPECIES 17 PAICS (ENSPPAG00000035354) PPAT (ENSPPAG00000041710) ENSPPAG00000041564 AASDH (ENSPPAG00000031321) ENSPPAG00000035697 CRACD (ENSPPAG00000032829) ENSPPAG00000042190 CEP135 (ENSPPAG00000043866) EXOC1 (ENSPPAG00000043855) EXOC1L (ENSPPAG00000028553) NMU (ENSPPAG00000038124) #16 PDCL2 (ENSPPAG00000038480) #17 CLOCK (ENSPPAG00000029615) #18 TMEM165 (ENSPPAG00000035865) #20 SRD5A3 (ENSPPAG00000028976) #21 KDR (ENSPPAG00000042774) #22 KIT (ENSPPAG00000032952) PDGFRA (ENSPPAG00000031952) ENSPPAG00000039875 GSX2 (ENSPPAG00000030659) ENSPPAG00000032307 CHIC2 (ENSPPAG00000010433) LNX1 (ENSPPAG00000037579) ENSPPAG00000032520 ENSPPAG00000029594 SCFD2 (ENSPPAG00000001904) RASL11B (ENSPPAG00000031269) ENSPPAG00000025880 ERVMER34-1 (ENSPPAG00000019038) USP46 (ENSPPAG00000011705) SPATA18 (ENSPPAG00000026258) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 16 ENSPTRG00000051285 PRSS50 (ENSPTRG00000030254) TMIE (ENSPTRG00000014856) ALS2CL (ENSPTRG00000014855) FAM240A (ENSPTRG00000045933) TDGF1 (ENSPTRG00000014854) ENSPTRG00000046412 LRRC2 (ENSPTRG00000014852) RTP3 (ENSPTRG00000014851) LTF (ENSPTRG00000014850) CCRL2 (ENSPTRG00000014849) CCR5 (ENSPTRG00000014848) CCR2 (ENSPTRG00000014847) CCR3 (ENSPTRG00000014846) CCR1 (ENSPTRG00000048183) ENSPTRG00000042883 #22 XCR1 (ENSPTRG00000030255) CXCR6 (ENSPTRG00000014843) FYCO1 (ENSPTRG00000014842) CCR9 (ENSPTRG00000014841) LZTFL1 (ENSPTRG00000014840) SLC6A20 (ENSPTRG00000014839) SACM1L (ENSPTRG00000030256) LIMD1 (ENSPTRG00000014835) LARS2 (ENSPTRG00000014833) TMEM158 (ENSPTRG00000039641) CDCP1 (ENSPTRG00000014832) CLEC3B (ENSPTRG00000014831) EXOSC7 (ENSPTRG00000014830) ZDHHC3 (ENSPTRG00000014829) TGM4 (ENSPTRG00000014827) Chimpanzee MODERN SPECIES 17 ENSPTRG00000048466 PAICS (ENSPTRG00000016081) PPAT (ENSPTRG00000016080) AASDH (ENSPTRG00000016079) ENSPTRG00000044386 CRACD (ENSPTRG00000016078) ENSPTRG00000045977 CEP135 (ENSPTRG00000016077) EXOC1 (ENSPTRG00000023159) EXOC1L (ENSPTRG00000046040) NMU (ENSPTRG00000016074) #16 PDCL2 (ENSPTRG00000016073) #17 CLOCK (ENSPTRG00000016072) #18 TMEM165 (ENSPTRG00000016071) #20 SRD5A3 (ENSPTRG00000016070) #21 KDR (ENSPTRG00000016069) #22 KIT (ENSPTRG00000016067) PDGFRA (ENSPTRG00000016066) ENSPTRG00000050400 GSX2 (ENSPTRG00000016065) ENSPTRG00000047699 CHIC2 (ENSPTRG00000016064) LNX1 (ENSPTRG00000016062) ENSPTRG00000048363 FIP1L1 (ENSPTRG00000016060) SCFD2 (ENSPTRG00000016059) RASL11B (ENSPTRG00000016058) ENSPTRG00000046219 ERVMER34-1 (ENSPTRG00000051750) USP46 (ENSPTRG00000043855) SPATA18 (ENSPTRG00000016054) Platyrrhini ANCESTRAL SPECIES 5 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000154326.a.a.h.a.a ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Cebidae ANCESTRAL SPECIES 4 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000154326.a.a.h.a.a ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Cebidae_a ANCESTRAL SPECIES 63 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000154326.a.a.h.a.a ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b.g ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Capuchin MODERN SPECIES 124 CEP135 (ENSCCAG00000035439) EXOC1 (ENSCCAG00000023309) EXOC1L (ENSCCAG00000029016) ENSCCAG00000019432 NMU (ENSCCAG00000033866) #16 PDCL2 (ENSCCAG00000021001) #17 CLOCK (ENSCCAG00000031941) #18 TMEM165 (ENSCCAG00000031593) #20 ENSCCAG00000012793 SRD5A3 (ENSCCAG00000037850) #21 ENSCCAG00000012342 KDR (ENSCCAG00000027345) #22 KIT (ENSCCAG00000033583) ENSCCAG00000012432 PDGFRA (ENSCCAG00000023887) ENSCCAG00000022442 GSX2 (ENSCCAG00000023920) CHIC2 (ENSCCAG00000030790) LNX1 (ENSCCAG00000034596) FIP1L1 (ENSCCAG00000021687) SCFD2 (ENSCCAG00000031373) ENSCCAG00000023197 ENSCCAG00000030526 ENSCCAG00000031404 RASL11B (ENSCCAG00000037560) ENSCCAG00000032234 ENSCCAG00000030356 Bolivian squirrel monkey MODERN SPECIES 99 ENSSBOG00000031860 ENSSBOG00000032586 PAICS (ENSSBOG00000024834) ENSSBOG00000017998 AASDH (ENSSBOG00000029836) CRACD (ENSSBOG00000034674) CEP135 (ENSSBOG00000023582) EXOC1 (ENSSBOG00000034813) EXOC1L (ENSSBOG00000023113) ENSSBOG00000017845 NMU (ENSSBOG00000028898) #16 PDCL2 (ENSSBOG00000027890) #17 CLOCK (ENSSBOG00000030594) #18 TMEM165 (ENSSBOG00000025423) #20 SRD5A3 (ENSSBOG00000026663) #21 KDR (ENSSBOG00000025028) #22 KIT (ENSSBOG00000031748) ENSSBOG00000024307 PDGFRA (ENSSBOG00000022806) GSX2 (ENSSBOG00000035576) CHIC2 (ENSSBOG00000015084) ENSSBOG00000010731 LNX1 (ENSSBOG00000034544) FIP1L1 (ENSSBOG00000033039) SCFD2 (ENSSBOG00000033762) RASL11B (ENSSBOG00000019612) USP46 (ENSSBOG00000016128) ENSSBOG00000013697 SPATA18 (ENSSBOG00000003084) SGCB (ENSSBOG00000027981) LRRC66 (ENSSBOG00000025555) Marmoset MODERN SPECIES 15 ENSCJAG00000017998 PAICS (ENSCJAG00000018022) PPAT (ENSCJAG00000039960) AASDH (ENSCJAG00000018076) CRACD (ENSCJAG00000018115) CEP135 (ENSCJAG00000018119) ENSCJAG00000072934 EXOC1 (ENSCJAG00000018175) EXOC1L (ENSCJAG00000085497) NMU (ENSCJAG00000018237) #16 ENSCJAG00000075161 PDCL2 (ENSCJAG00000018258) #17 CLOCK (ENSCJAG00000018261) #18 TMEM165 (ENSCJAG00000046061) #20 SRD5A3 (ENSCJAG00000052753) #21 KDR (ENSCJAG00000018352) #22 KIT (ENSCJAG00000018396) PDGFRA (ENSCJAG00000018415) ENSCJAG00000086980 ENSCJAG00000068751 GSX2 (ENSCJAG00000018454) CHIC2 (ENSCJAG00000041961) ENSCJAG00000083456 ENSCJAG00000082324 LNX1 (ENSCJAG00000018469) FIP1L1 (ENSCJAG00000018490) SCFD2 (ENSCJAG00000018545) ENSCJAG00000072048 ERVMER34-1 (ENSCJAG00000062102) USP46 (ENSCJAG00000018556) SPATA18 (ENSCJAG00000018594) Mas night monkey MODERN SPECIES 469 THEGL (ENSANAG00000038152) ENSANAG00000033375 SRP72 (ENSANAG00000020836) PAICS (ENSANAG00000024043) PPAT (ENSANAG00000031138) AASDH (ENSANAG00000035915) CRACD (ENSANAG00000021913) CEP135 (ENSANAG00000037147) EXOC1 (ENSANAG00000020021) EXOC1L (ENSANAG00000037409) NMU (ENSANAG00000031034) #16 PDCL2 (ENSANAG00000020418) #17 CLOCK (ENSANAG00000023882) #18 TMEM165 (ENSANAG00000021886) #20 SRD5A3 (ENSANAG00000035851) #21 KDR (ENSANAG00000032646) #22 ENSANAG00000038115 KIT (ENSANAG00000030367) ENSANAG00000033625 PDGFRA (ENSANAG00000023924) GSX2 (ENSANAG00000019366) CHIC2 (ENSANAG00000028323) ENSANAG00000037095 LNX1 (ENSANAG00000028251) ENSANAG00000032461 SCFD2 (ENSANAG00000037492) ENSANAG00000027223 ENSANAG00000036362 RASL11B (ENSANAG00000030414) USP46 (ENSANAG00000037399) SPATA18 (ENSANAG00000024358) Tarsier MODERN SPECIES 1625 ENSTSYG00000027943 NMU (ENSTSYG00000007578) #16 PDCL2 (ENSTSYG00000008223) #17 CLOCK (ENSTSYG00000003546) #18 TMEM165 (ENSTSYG00000003540) #20 SRD5A3 (ENSTSYG00000010398) #21 KDR (ENSTSYG00000004340) #22 KIT (ENSTSYG00000004428) PDGFRA (ENSTSYG00000004711) CHIC2 (ENSTSYG00000005625) Strepsirrhini ANCESTRAL SPECIES 18 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b.e Lemuriformes ANCESTRAL SPECIES 39 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b.e Mouse lemur MODERN SPECIES 130 ENSMICG00000036183 SRP72 (ENSMICG00000008507) PAICS (ENSMICG00000036099) ENSMICG00000044633 AASDH (ENSMICG00000008484) ENSMICG00000033928 CRACD (ENSMICG00000034949) CEP135 (ENSMICG00000033892) EXOC1 (ENSMICG00000000681) EXOC1L (ENSMICG00000043366) NMU (ENSMICG00000004184) #16 PDCL2 (ENSMICG00000004180) #17 CLOCK (ENSMICG00000000320) #18 TMEM165 (ENSMICG00000000319) #20 SRD5A3 (ENSMICG00000000317) #21 KDR (ENSMICG00000007310) #22 KIT (ENSMICG00000000829) PDGFRA (ENSMICG00000014660) ENSMICG00000030147 SLAIN2 (ENSMICG00000011592) Lemuriformes_a ANCESTRAL SPECIES 30 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b.e Greater bamboo lemur MODERN SPECIES 178 ARL9 (ENSPSMG00000019462) SRP72 (ENSPSMG00000019534) ENSPSMG00000019595 PPAT (ENSPSMG00000019621) ENSPSMG00000019626 AASDH (ENSPSMG00000019697) CRACD (ENSPSMG00000019816) CEP135 (ENSPSMG00000019872) EXOC1 (ENSPSMG00000020052) EXOC1L (ENSPSMG00000020116) NMU (ENSPSMG00000020128) #16 PDCL2 (ENSPSMG00000020136) #17 CLOCK (ENSPSMG00000020165) #18 TMEM165 (ENSPSMG00000020185) #20 SRD5A3 (ENSPSMG00000020219) #21 KDR (ENSPSMG00000020248) #22 KIT (ENSPSMG00000020340) PDGFRA (ENSPSMG00000020413) GSX2 (ENSPSMG00000020423) CHIC2 (ENSPSMG00000020440) LNX1 (ENSPSMG00000020471) FIP1L1 (ENSPSMG00000020888) SCFD2 (ENSPSMG00000021233) RASL11B (ENSPSMG00000021259) ENSPSMG00000021331 SPATA18 (ENSPSMG00000021358) SGCB (ENSPSMG00000021382) DCUN1D4 (ENSPSMG00000021445) ENSPSMG00000021464 CWH43 (ENSPSMG00000021491) OCIAD2 (ENSPSMG00000021515) Coquerels sifaka MODERN SPECIES 219 ENSPCOG00000016025 ENSPCOG00000011023 SRP72 (ENSPCOG00000018953) PAICS (ENSPCOG00000020490) ENSPCOG00000018898 AASDH (ENSPCOG00000017744) CRACD (ENSPCOG00000023584) ENSPCOG00000025929 ENSPCOG00000022570 EXOC1L (ENSPCOG00000012908) NMU (ENSPCOG00000009907) #16 PDCL2 (ENSPCOG00000008474) #17 CLOCK (ENSPCOG00000019043) #18 TMEM165 (ENSPCOG00000027016) #20 SRD5A3 (ENSPCOG00000028827) #21 KDR (ENSPCOG00000013368) #22 KIT (ENSPCOG00000024040) PDGFRA (ENSPCOG00000025472) GSX2 (ENSPCOG00000023707) CHIC2 (ENSPCOG00000021210) LNX1 (ENSPCOG00000019418) FIP1L1 (ENSPCOG00000021280) ENSPCOG00000014837 Bushbaby MODERN SPECIES 198 EXOC1 (ENSOGAG00000005861) EXOC1L (ENSOGAG00000005859) ENSOGAG00000031389 PDCL2 (ENSOGAG00000012475) #17 CLOCK (ENSOGAG00000012464) #18 TMEM165 (ENSOGAG00000012462) #20 SRD5A3 (ENSOGAG00000012340) #21 KDR (ENSOGAG00000013598) #22 KIT (ENSOGAG00000009550) ENSOGAG00000025123 PDGFRA (ENSOGAG00000012544) GSX2 (ENSOGAG00000015271) CHIC2 (ENSOGAG00000009570) LNX1 (ENSOGAG00000009552) FIP1L1 (ENSOGAG00000009545) ENSOGAG00000009543 ENSOGAG00000031587 RASL11B (ENSOGAG00000009539) USP46 (ENSOGAG00000008762) SPATA18 (ENSOGAG00000026234) SGCB (ENSOGAG00000005669) LRRC66 (ENSOGAG00000025206) DCUN1D4 (ENSOGAG00000012891) Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Tree shrew MODERN SPECIES 1219 KDR (ENSTBEG00000000996) #22 Glires ANCESTRAL SPECIES 8 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Rodentia ANCESTRAL SPECIES 13 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Rodentia_B ANCESTRAL SPECIES 19 ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000169459 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Myomorpha ANCESTRAL SPECIES 19 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000169459 ENSGT00940000165267 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Muroidea ANCESTRAL SPECIES 17 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172.f ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Cricetinae ANCESTRAL SPECIES 9 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172.f ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Chinese hamster chok1gshd MODERN SPECIES 44 Arl9 (ENSCGRG00001025054) Srp72 (ENSCGRG00001013548) ENSCGRG00001022669 Ppat (ENSCGRG00001020260) Aasdh (ENSCGRG00001017656) Cracd (ENSCGRG00001023592) ENSCGRG00001021318 Cep135 (ENSCGRG00001020803) Exoc1 (ENSCGRG00001019607) Exoc1l (ENSCGRG00001015240) Nmu (ENSCGRG00001012189) #16 Pdcl2 (ENSCGRG00001016710) #17 Clock (ENSCGRG00001012746) #18 Tmem165 (ENSCGRG00001016385) #20 Srd5a3 (ENSCGRG00001002000) #21 Kdr (ENSCGRG00001019345) #22 ENSCGRG00001009055 Kit (ENSCGRG00001013653) ENSCGRG00001010956 Pdgfra (ENSCGRG00001015525) ENSCGRG00001012414 Gsx2 (ENSCGRG00001002346) Chic2 (ENSCGRG00001024567) Lnx1 (ENSCGRG00001011729) Fip1l1 (ENSCGRG00001018568) Scfd2 (ENSCGRG00001012042) Rasl11b (ENSCGRG00001011283) ENSCGRG00001002572 Usp46 (ENSCGRG00001018619) ENSCGRG00001000842 ENSCGRG00001013783 Golden Hamster MODERN SPECIES 720 Thegl (ENSMAUG00000009973) Arl9 (ENSMAUG00000014055) Srp72 (ENSMAUG00000001237) Paics (ENSMAUG00000017200) Ppat (ENSMAUG00000018321) Aasdh (ENSMAUG00000009600) Cracd (ENSMAUG00000021186) Cep135 (ENSMAUG00000011590) Exoc1 (ENSMAUG00000000845) Exoc1l (ENSMAUG00000008650) Nmu (ENSMAUG00000004029) #16 Pdcl2 (ENSMAUG00000016445) #17 Clock (ENSMAUG00000012196) #18 Tmem165 (ENSMAUG00000019967) #20 Srd5a3 (ENSMAUG00000003018) #21 Kdr (ENSMAUG00000016126) #22 ENSMAUG00000013726 Pdgfra (ENSMAUG00000018986) Gsx2 (ENSMAUG00000022163) Chic2 (ENSMAUG00000012879) Lnx1 (ENSMAUG00000021129) Fip1l1 (ENSMAUG00000010526) Scfd2 (ENSMAUG00000011399) Rasl11b (ENSMAUG00000003048) Usp46 (ENSMAUG00000017316) Spata18 (ENSMAUG00000011598) Sgcb (ENSMAUG00000006887) Lrrc66 (ENSMAUG00000009663) Dcun1d4 (ENSMAUG00000000472) Cwh43 (ENSMAUG00000008567) Ociad2 (ENSMAUG00000014577) Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172.f ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Prairie vole MODERN SPECIES 349 ENSMOCG00000019958 ENSMOCG00000007056 ENSMOCG00000022620 ENSMOCG00000017325 ENSMOCG00000016218 ENSMOCG00000000709 ENSMOCG00000016902 Cep135 (ENSMOCG00000022436) Exoc1 (ENSMOCG00000019131) Exoc1l (ENSMOCG00000002325) Nmu (ENSMOCG00000002680) #16 Pdcl2 (ENSMOCG00000014108) #17 Clock (ENSMOCG00000000757) #18 Tmem165 (ENSMOCG00000013834) #20 Srd5a3 (ENSMOCG00000006257) #21 Kdr (ENSMOCG00000017085) #22 Kit (ENSMOCG00000007652) Pdgfra (ENSMOCG00000012103) Gsx2 (ENSMOCG00000010227) Chic2 (ENSMOCG00000000811) Lnx1 (ENSMOCG00000015978) Fip1l1 (ENSMOCG00000008020) Scfd2 (ENSMOCG00000015774) Rasl11b (ENSMOCG00000022471) Usp46 (ENSMOCG00000016898) Spata18 (ENSMOCG00000019737) Sgcb (ENSMOCG00000000430) Lrrc66 (ENSMOCG00000017330) Dcun1d4 (ENSMOCG00000012545) Cwh43 (ENSMOCG00000009924) ENSMOCG00000000283 Northern American deer mouse MODERN SPECIES 1 Thegl (ENSPEMG00000001037) Arl9 (ENSPEMG00000005278) Srp72 (ENSPEMG00000012828) ENSPEMG00000001745 Ppat (ENSPEMG00000016464) Aasdh (ENSPEMG00000011196) Cracd (ENSPEMG00000010216) Cep135 (ENSPEMG00000012282) Exoc1 (ENSPEMG00000014937) Exoc1l (ENSPEMG00000015388) Nmu (ENSPEMG00000014701) #16 Pdcl2 (ENSPEMG00000011759) #17 Clock (ENSPEMG00000014058) #18 Tmem165 (ENSPEMG00000009507) #20 Srd5a3 (ENSPEMG00000010609) #21 Kdr (ENSPEMG00000018642) #22 Kit (ENSPEMG00000011261) ENSPEMG00000025221 Pdgfra (ENSPEMG00000007844) Gsx2 (ENSPEMG00000008341) Chic2 (ENSPEMG00000016307) Lnx1 (ENSPEMG00000001631) Fip1l1 (ENSPEMG00000002025) ENSPEMG00000026634 Scfd2 (ENSPEMG00000009457) Rasl11b (ENSPEMG00000025524) Usp46 (ENSPEMG00000009974) Spata18 (ENSPEMG00000024192) Sgcb (ENSPEMG00000024200) Lrrc66 (ENSPEMG00000017432) Dcun1d4 (ENSPEMG00000009638) Murinae ANCESTRAL SPECIES 12 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Mus ANCESTRAL SPECIES 14 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Mus_A ANCESTRAL SPECIES 6 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Mus_B ANCESTRAL SPECIES 4 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Mus_C ANCESTRAL SPECIES 4 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Steppe mouse MODERN SPECIES 3186 Srp72 (ENSMSIG00000020197) ENSMSIG00000020115 Ppat (ENSMSIG00000020090) Aasdh (ENSMSIG00000020041) ENSMSIG00000019982 Cep135 (ENSMSIG00000019858) Exoc1 (ENSMSIG00000019769) Exoc1l (ENSMSIG00000019754) ENSMSIG00000019748 Nmu (ENSMSIG00000019724) #16 Pdcl2 (ENSMSIG00000019711) #17 ENSMSIG00000019701 Clock (ENSMSIG00000019589) #18 Tmem165 (ENSMSIG00000019563) #20 Srd5a3 (ENSMSIG00000019532) #21 Kdr (ENSMSIG00000019455) #22 Kit (ENSMSIG00000019425) Pdgfra (ENSMSIG00000019363) spretus MODERN SPECIES 14 Hopx (MGP_SPRETEiJ_G0028320) Thegl (MGP_SPRETEiJ_G0028319) Arl9 (MGP_SPRETEiJ_G0028318) Srp72 (MGP_SPRETEiJ_G0028317) MGP_SPRETEiJ_G0028316 Ppat (MGP_SPRETEiJ_G0028315) MGP_SPRETEiJ_G0028314 Cracd (MGP_SPRETEiJ_G0028313) Cep135 (MGP_SPRETEiJ_G0028312) Exoc1 (MGP_SPRETEiJ_G0028311) Nmu (MGP_SPRETEiJ_G0028310) #16 Pdcl2 (MGP_SPRETEiJ_G0028309) #17 Clock (MGP_SPRETEiJ_G0028308) #18 Tmem165 (MGP_SPRETEiJ_G0028307) #20 Srd5a3 (MGP_SPRETEiJ_G0028306) #21 Kdr (MGP_SPRETEiJ_G0028305) #22 Kit (MGP_SPRETEiJ_G0028304) Pdgfra (MGP_SPRETEiJ_G0028303) Gsx2 (MGP_SPRETEiJ_G0028302) Chic2 (MGP_SPRETEiJ_G0028301) Lnx1 (MGP_SPRETEiJ_G0028300) Fip1l1 (MGP_SPRETEiJ_G0028299) Scfd2 (MGP_SPRETEiJ_G0028298) Rasl11b (MGP_SPRETEiJ_G0028297) Usp46 (MGP_SPRETEiJ_G0028296) Spata18 (MGP_SPRETEiJ_G0028295) Sgcb (MGP_SPRETEiJ_G0028294) MGP_SPRETEiJ_G0028293 Dcun1d4 (MGP_SPRETEiJ_G0028292) Cwh43 (MGP_SPRETEiJ_G0028291) Ociad2 (MGP_SPRETEiJ_G0028290) Mouse MODERN SPECIES 14 Thegl (ENSMUSG00000029248) Arl9 (ENSMUSG00000063820) Srp72 (ENSMUSG00000036323) Paics (ENSMUSG00000029247) Ppat (ENSMUSG00000029246) Aasdh (ENSMUSG00000055923) Cracd (ENSMUSG00000036377) Cep135 (ENSMUSG00000036403) Exoc1 (ENSMUSG00000036435) Exoc1l (ENSMUSG00000091204) Nmu (ENSMUSG00000029236) #16 Pdcl2 (ENSMUSG00000029235) #17 Clock (ENSMUSG00000029238) #18 Tmem165 (ENSMUSG00000029234) #20 Srd5a3 (ENSMUSG00000029233) #21 Kdr (ENSMUSG00000062960) #22 Kit (ENSMUSG00000005672) Pdgfra (ENSMUSG00000029231) Gsx2 (ENSMUSG00000035946) Chic2 (ENSMUSG00000029229) Lnx1 (ENSMUSG00000029228) Fip1l1 (ENSMUSG00000029227) Scfd2 (ENSMUSG00000062110) Rasl11b (ENSMUSG00000049907) Usp46 (ENSMUSG00000054814) Spata18 (ENSMUSG00000029155) Sgcb (ENSMUSG00000029156) Lrrc66 (ENSMUSG00000067206) Dcun1d4 (ENSMUSG00000051674) Cwh43 (ENSMUSG00000029154) Ociad2 (ENSMUSG00000029153) Ryukyu mouse MODERN SPECIES 14 Hopx (MGP_CAROLIEiJ_G0027326) Thegl (MGP_CAROLIEiJ_G0027325) Arl9 (MGP_CAROLIEiJ_G0027324) Srp72 (MGP_CAROLIEiJ_G0027323) Paics (MGP_CAROLIEiJ_G0027322) Ppat (MGP_CAROLIEiJ_G0027321) Aasdh (MGP_CAROLIEiJ_G0027320) Cracd (MGP_CAROLIEiJ_G0027319) Cep135 (MGP_CAROLIEiJ_G0027318) Exoc1 (MGP_CAROLIEiJ_G0027317) Nmu (MGP_CAROLIEiJ_G0027316) #16 Pdcl2 (MGP_CAROLIEiJ_G0027315) #17 Clock (MGP_CAROLIEiJ_G0027314) #18 Tmem165 (MGP_CAROLIEiJ_G0027313) #20 Srd5a3 (MGP_CAROLIEiJ_G0027312) #21 Kdr (MGP_CAROLIEiJ_G0027311) #22 Kit (MGP_CAROLIEiJ_G0027310) Pdgfra (MGP_CAROLIEiJ_G0027309) Bicdl1 (MGP_CAROLIEiJ_G0027308) Gsx2 (MGP_CAROLIEiJ_G0027307) Chic2 (MGP_CAROLIEiJ_G0027306) Lnx1 (MGP_CAROLIEiJ_G0027305) Fip1l1 (MGP_CAROLIEiJ_G0027304) Scfd2 (MGP_CAROLIEiJ_G0027303) Rasl11b (MGP_CAROLIEiJ_G0027302) Usp46 (MGP_CAROLIEiJ_G0027301) Spata18 (MGP_CAROLIEiJ_G0027300) Sgcb (MGP_CAROLIEiJ_G0027299) MGP_CAROLIEiJ_G0027298 Dcun1d4 (MGP_CAROLIEiJ_G0027297) Cwh43 (MGP_CAROLIEiJ_G0027296) Shrew mouse MODERN SPECIES 4 Hopx (MGP_PahariEiJ_G0017106) Thegl (MGP_PahariEiJ_G0017105) Arl9 (MGP_PahariEiJ_G0017104) Srp72 (MGP_PahariEiJ_G0017103) Paics (MGP_PahariEiJ_G0017102) Ppat (MGP_PahariEiJ_G0017101) Aasdh (MGP_PahariEiJ_G0017100) MGP_PahariEiJ_G0017099 Cep135 (MGP_PahariEiJ_G0017098) Exoc1 (MGP_PahariEiJ_G0017097) Nmu (MGP_PahariEiJ_G0017096) #16 Pdcl2 (MGP_PahariEiJ_G0017095) #17 Clock (MGP_PahariEiJ_G0017094) #18 Tmem165 (MGP_PahariEiJ_G0017093) #20 Srd5a3 (MGP_PahariEiJ_G0017092) #21 Kdr (MGP_PahariEiJ_G0017091) #22 Kit (MGP_PahariEiJ_G0017090) Pdgfra (MGP_PahariEiJ_G0017089) Gsx2 (MGP_PahariEiJ_G0017088) Chic2 (MGP_PahariEiJ_G0017087) Lnx1 (MGP_PahariEiJ_G0017086) Fip1l1 (MGP_PahariEiJ_G0017085) Scfd2 (MGP_PahariEiJ_G0017084) Rasl11b (MGP_PahariEiJ_G0017083) Usp46 (MGP_PahariEiJ_G0017082) Spata18 (MGP_PahariEiJ_G0017081) Sgcb (MGP_PahariEiJ_G0017080) MGP_PahariEiJ_G0017079 Dcun1d4 (MGP_PahariEiJ_G0017078) Cwh43 (MGP_PahariEiJ_G0017077) Ociad2 (MGP_PahariEiJ_G0017076) Rat MODERN SPECIES 5 Thegl (ENSRNOG00000002085) Arl9 (ENSRNOG00000029628) LOC108348180 (ENSRNOG00000002100) Paics (ENSRNOG00000002101) Ppat (ENSRNOG00000002128) Aasdh (ENSRNOG00000002137) Cracd (ENSRNOG00000002139) Cep135 (ENSRNOG00000002153) Exoc1 (ENSRNOG00000002144) Exoc1l (ENSRNOG00000050100) Nmu (ENSRNOG00000002164) #16 Pdcl2 (ENSRNOG00000002169) #17 Clock (ENSRNOG00000002175) #18 Tmem165 (ENSRNOG00000002199) #20 Srd5a3 (ENSRNOG00000002216) #21 Kdr (ENSRNOG00000046829) #22 Kit (ENSRNOG00000002227) ENSRNOG00000063288 Pdgfra (ENSRNOG00000002244) Gsx2 (ENSRNOG00000002266) Chic2 (ENSRNOG00000002267) Lnx1 (ENSRNOG00000002272) Fip1l1 (ENSRNOG00000002275) Scfd2 (ENSRNOG00000026828) Rasl11b (ENSRNOG00000002097) Usp46 (ENSRNOG00000002106) LOC100363494 (ENSRNOG00000068757) Spata18 (ENSRNOG00000002120) Sgcb (ENSRNOG00000002135) Lrrc66 (ENSRNOG00000026585) Dcun1d4 (ENSRNOG00000002152) Upper Galilee mountains blind mole rat MODERN SPECIES 842 Arl9 (ENSNGAG00000008945) Srp72 (ENSNGAG00000012595) Paics (ENSNGAG00000014177) Ppat (ENSNGAG00000003683) ENSNGAG00000011459 ENSNGAG00000022499 ENSNGAG00000022872 Cep135 (ENSNGAG00000024071) Exoc1 (ENSNGAG00000000680) Exoc1l (ENSNGAG00000020410) Nmu (ENSNGAG00000020747) #16 Pdcl2 (ENSNGAG00000012358) #17 Clock (ENSNGAG00000017297) #18 Tmem165 (ENSNGAG00000012244) #20 Srd5a3 (ENSNGAG00000013026) #21 Kdr (ENSNGAG00000002982) #22 Kit (ENSNGAG00000015645) Pdgfra (ENSNGAG00000009344) Gsx2 (ENSNGAG00000008405) Chic2 (ENSNGAG00000016892) Lnx1 (ENSNGAG00000002832) Fip1l1 (ENSNGAG00000008849) ENSNGAG00000021379 Lesser Egyptian jerboa MODERN SPECIES 118 ENSJJAG00000019551 Arl9 (ENSJJAG00000015666) Srp72 (ENSJJAG00000018324) Paics (ENSJJAG00000016134) Ppat (ENSJJAG00000018540) ENSJJAG00000006915 ENSJJAG00000020557 ENSJJAG00000022354 Cep135 (ENSJJAG00000008680) Exoc1l (ENSJJAG00000012422) ENSJJAG00000018096 #16 Pdcl2 (ENSJJAG00000023785) #17 Clock (ENSJJAG00000022276) #18 Tmem165 (ENSJJAG00000010186) #20 Srd5a3 (ENSJJAG00000015553) #21 Kdr (ENSJJAG00000000358) #22 Kangaroo rat MODERN SPECIES 327 Srp72 (ENSDORG00000000171) Paics (ENSDORG00000000167) Ppat (ENSDORG00000000166) ENSDORG00000028255 ENSDORG00000025512 ENSDORG00000027747 ENSDORG00000000162 Cep135 (ENSDORG00000001804) ENSDORG00000026235 Exoc1 (ENSDORG00000012170) Exoc1l (ENSDORG00000023656) Pdcl2 (ENSDORG00000009617) #17 Clock (ENSDORG00000008014) #18 Tmem165 (ENSDORG00000008013) #20 Srd5a3 (ENSDORG00000008012) #21 Kdr (ENSDORG00000006837) #22 Kit (ENSDORG00000007317) Pdgfra (ENSDORG00000002763) Gsx2 (ENSDORG00000000416) Chic2 (ENSDORG00000027994) Lnx1 (ENSDORG00000005635) ENSDORG00000005629 Scfd2 (ENSDORG00000005627) Rasl11b (ENSDORG00000030008) Usp46 (ENSDORG00000005800) ENSDORG00000013679 Sgcb (ENSDORG00000009646) Dcun1d4 (ENSDORG00000009641) Cwh43 (ENSDORG00000012169) Ociad2 (ENSDORG00000016565) ENSDORG00000014483 Rodentia_A ANCESTRAL SPECIES 20 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000165267 ENSGT01030000238073 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.j ENSGT00390000013532.i ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165267 ENSGT01030000238073 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.j ENSGT00390000013532.i ENSGT00390000008110 ENSGT00940000156935 ENSGT00510000048509 Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000165267 ENSGT01030000238073 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.j ENSGT00390000013532.i ENSGT00390000008110 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Guinea pig MODERN SPECIES 24 ENSCPOG00000000220 SRP72 (ENSCPOG00000000218) ENSCPOG00000010749 PPAT (ENSCPOG00000000216) AASDH (ENSCPOG00000000215) ENSCPOG00000040605 ENSCPOG00000000214 CEP135 (ENSCPOG00000003212) EXOC1 (ENSCPOG00000003208) EXOC1L (ENSCPOG00000040720) NMU (ENSCPOG00000009016) #16 PDCL2 (ENSCPOG00000036525) #17 CLOCK (ENSCPOG00000011807) #18 TMEM165 (ENSCPOG00000011803) #20 SRD5A3 (ENSCPOG00000011801) #21 KDR (ENSCPOG00000010001) #22 KIT (ENSCPOG00000011411) PDGFRA (ENSCPOG00000011782) GSX2 (ENSCPOG00000005837) CHIC2 (ENSCPOG00000040036) LNX1 (ENSCPOG00000010775) ENSCPOG00000010770 SCFD2 (ENSCPOG00000039431) RASL11B (ENSCPOG00000010760) USP46 (ENSCPOG00000007660) ENSCPOG00000011469 SGCB (ENSCPOG00000030752) DCUN1D4 (ENSCPOG00000008945) CWH43 (ENSCPOG00000014177) ENSCPOG00000019887 OCIAD1 (ENSCPOG00000011863) Hystricomorpha_b ANCESTRAL SPECIES 76 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000165267 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.j ENSGT00390000013532.i ENSGT00390000008110 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Long-tailed chinchilla MODERN SPECIES 154 SRP72 (ENSCLAG00000003571) PAICS (ENSCLAG00000005063) PPAT (ENSCLAG00000004229) ENSCLAG00000004994 AASDH (ENSCLAG00000005208) ENSCLAG00000005580 ENSCLAG00000006063 CEP135 (ENSCLAG00000003843) EXOC1 (ENSCLAG00000011547) EXOC1L (ENSCLAG00000003403) NMU (ENSCLAG00000003714) #16 PDCL2 (ENSCLAG00000004036) #17 CLOCK (ENSCLAG00000004837) #18 TMEM165 (ENSCLAG00000005359) #20 SRD5A3 (ENSCLAG00000014169) #21 KDR (ENSCLAG00000010052) #22 KIT (ENSCLAG00000006440) PDGFRA (ENSCLAG00000005250) CHIC2 (ENSCLAG00000005438) LNX1 (ENSCLAG00000005760) ENSCLAG00000003675 SCFD2 (ENSCLAG00000006610) RASL11B (ENSCLAG00000005450) USP46 (ENSCLAG00000006241) ENSCLAG00000006715 SGCB (ENSCLAG00000008014) DCUN1D4 (ENSCLAG00000008724) CWH43 (ENSCLAG00000011864) OCIAD2 (ENSCLAG00000012791) OCIAD1 (ENSCLAG00000004026) FRYL (ENSCLAG00000004818) Degu MODERN SPECIES 60 ENSODEG00000010449 SRP72 (ENSODEG00000012214) ENSODEG00000009422 PPAT (ENSODEG00000009426) AASDH (ENSODEG00000011546) ENSODEG00000010954 CEP135 (ENSODEG00000010808) EXOC1 (ENSODEG00000010280) EXOC1L (ENSODEG00000011413) NMU (ENSODEG00000010066) #16 PDCL2 (ENSODEG00000009736) #17 CLOCK (ENSODEG00000009397) #18 TMEM165 (ENSODEG00000009162) #20 SRD5A3 (ENSODEG00000009796) #21 ENSODEG00000012100 KDR (ENSODEG00000009430) #22 KIT (ENSODEG00000012738) ENSODEG00000011811 PDGFRA (ENSODEG00000009544) GSX2 (ENSODEG00000009015) CHIC2 (ENSODEG00000009727) ENSODEG00000019624 ENSODEG00000009055 ENSODEG00000008952 ENSODEG00000008823 LNX1 (ENSODEG00000010836) ENSODEG00000009001 ENSODEG00000019669 ENSODEG00000008819 SCFD2 (ENSODEG00000010104) RASL11B (ENSODEG00000010294) Naked mole-rat female MODERN SPECIES 1 SRP72 (ENSHGLG00000009791) PAICS (ENSHGLG00000016700) PPAT (ENSHGLG00000015015) AASDH (ENSHGLG00000015134) CRACD (ENSHGLG00000016718) ENSHGLG00000044551 CEP135 (ENSHGLG00000015882) EXOC1 (ENSHGLG00000016475) EXOC1L (ENSHGLG00000018199) NMU (ENSHGLG00000006706) #16 PDCL2 (ENSHGLG00000008374) #17 CLOCK (ENSHGLG00000016989) #18 ENSHGLG00000017032 TMEM165 (ENSHGLG00000018297) #20 SRD5A3 (ENSHGLG00000006595) #21 KDR (ENSHGLG00000011062) #22 KIT (ENSHGLG00000006129) PDGFRA (ENSHGLG00000007320) GSX2 (ENSHGLG00000016176) CHIC2 (ENSHGLG00000016294) ENSHGLG00000037646 LNX1 (ENSHGLG00000017095) FIP1L1 (ENSHGLG00000018937) SCFD2 (ENSHGLG00000008861) ENSHGLG00000035001 RASL11B (ENSHGLG00000018686) ENSHGLG00000048480 USP46 (ENSHGLG00000018346) ENSHGLG00000015649 SPATA18 (ENSHGLG00000040259) ENSHGLG00000038499 Sciuridae ANCESTRAL SPECIES 19 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000165267 ENSGT01030000238073 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.j ENSGT00390000013532.i ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Marmotini ANCESTRAL SPECIES 26 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453.e.a ENSGT00940000165267 ENSGT01030000238073 ENSGT00940000159453.f ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.j ENSGT00390000013532.i ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Marmotini_b ANCESTRAL SPECIES 48 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453.e.a ENSGT00940000165267 ENSGT01030000238073 ENSGT00940000159453.f ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.j ENSGT00390000013532.i ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Arctic ground squirrel MODERN SPECIES 2 ENSUPAG00010021417 ENSUPAG00010021399 ENSUPAG00010021395 ENSUPAG00010021392 PPAT (ENSUPAG00010021383) AASDH (ENSUPAG00010021378) CRACD (ENSUPAG00010021307) ENSUPAG00010021057 EXOC1 (ENSUPAG00010020914) EXOC1L (ENSUPAG00010020900) NMU (ENSUPAG00010020889) #16 PDCL2 (ENSUPAG00010020882) #17 CLOCK (ENSUPAG00010020844) #18 TMEM165 (ENSUPAG00010020837) #20 SRD5A3 (ENSUPAG00010020831) #21 KDR (ENSUPAG00010020785) #22 KIT (ENSUPAG00010020754) PDGFRA (ENSUPAG00010020707) GSX2 (ENSUPAG00010020700) CHIC2 (ENSUPAG00010020698) LNX1 (ENSUPAG00010020578) ENSUPAG00010020429 SCFD2 (ENSUPAG00010020412) RASL11B (ENSUPAG00010020408) USP46 (ENSUPAG00010020388) ENSUPAG00010020376 ENSUPAG00010020374 SGCB (ENSUPAG00010020369) LRRC66 (ENSUPAG00010020366) DCUN1D4 (ENSUPAG00010020336) CWH43 (ENSUPAG00010020291) Squirrel MODERN SPECIES 82 SRP72 (ENSSTOG00000007305) PAICS (ENSSTOG00000007284) PPAT (ENSSTOG00000007261) AASDH (ENSSTOG00000007226) ENSSTOG00000028370 ENSSTOG00000032240 CEP135 (ENSSTOG00000000223) EXOC1 (ENSSTOG00000023883) EXOC1L (ENSSTOG00000010455) ENSSTOG00000033766 NMU (ENSSTOG00000006143) #16 PDCL2 (ENSSTOG00000006124) #17 CLOCK (ENSSTOG00000016179) #18 TMEM165 (ENSSTOG00000025897) #20 SRD5A3 (ENSSTOG00000016177) #21 KDR (ENSSTOG00000016171) #22 KIT (ENSSTOG00000000752) PDGFRA (ENSSTOG00000011314) GSX2 (ENSSTOG00000023286) CHIC2 (ENSSTOG00000023668) LNX1 (ENSSTOG00000012178) ENSSTOG00000012166 SCFD2 (ENSSTOG00000012162) RASL11B (ENSSTOG00000027610) ENSSTOG00000033365 USP46 (ENSSTOG00000012149) ENSSTOG00000004581 ENSSTOG00000032283 SGCB (ENSSTOG00000004569) LRRC66 (ENSSTOG00000022844) DCUN1D4 (ENSSTOG00000013799) Alpin marmot MODERN SPECIES 9 ARL9 (ENSMMMG00000021256) SRP72 (ENSMMMG00000021224) PAICS (ENSMMMG00000021214) ENSMMMG00000021211 ENSMMMG00000021205 AASDH (ENSMMMG00000021120) CRACD (ENSMMMG00000020998) ENSMMMG00000020762 EXOC1 (ENSMMMG00000020709) EXOC1L (ENSMMMG00000020698) NMU (ENSMMMG00000020691) #16 PDCL2 (ENSMMMG00000020666) #17 CLOCK (ENSMMMG00000020601) #18 TMEM165 (ENSMMMG00000020591) #20 SRD5A3 (ENSMMMG00000020584) #21 KDR (ENSMMMG00000020555) #22 KIT (ENSMMMG00000020518) PDGFRA (ENSMMMG00000020466) GSX2 (ENSMMMG00000020460) CHIC2 (ENSMMMG00000020457) LNX1 (ENSMMMG00000020305) ENSMMMG00000020140 SCFD2 (ENSMMMG00000020102) RASL11B (ENSMMMG00000020096) ENSMMMG00000020094 ENSMMMG00000020086 USP46 (ENSMMMG00000020069) ENSMMMG00000020060 ENSMMMG00000020059 SGCB (ENSMMMG00000020055) LRRC66 (ENSMMMG00000020043) Eurasian red squirrel MODERN SPECIES 18 ARL9 (ENSSVLG00005019282) SRP72 (ENSSVLG00005019460) ENSSVLG00005019565 PPAT (ENSSVLG00005019646) ENSSVLG00005019738 AASDH (ENSSVLG00005019805) CRACD (ENSSVLG00005020021) ENSSVLG00005020514 ENSSVLG00005020590 EXOC1L (ENSSVLG00005020891) NMU (ENSSVLG00005020969) #16 PDCL2 (ENSSVLG00005021329) #17 CLOCK (ENSSVLG00005021388) #18 TMEM165 (ENSSVLG00005021425) #20 SRD5A3 (ENSSVLG00005021472) #21 KDR (ENSSVLG00005021516) #22 KIT (ENSSVLG00005021747) PDGFRA (ENSSVLG00005022004) GSX2 (ENSSVLG00005022055) CHIC2 (ENSSVLG00005022117) ENSSVLG00005022179 LNX1 (ENSSVLG00005022254) FIP1L1 (ENSSVLG00005022448) SCFD2 (ENSSVLG00005022776) RASL11B (ENSSVLG00005022855) ENSSVLG00005022878 USP46 (ENSSVLG00005022950) SPATA18 (ENSSVLG00005023119) SGCB (ENSSVLG00005023300) LRRC66 (ENSSVLG00005023343) ENSSVLG00005023431 Lagomorpha ANCESTRAL SPECIES 106 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 Rabbit MODERN SPECIES 6 PPAT (ENSOCUG00000012201) ENSOCUG00000036591 AASDH (ENSOCUG00000012192) CRACD (ENSOCUG00000012185) CEP135 (ENSOCUG00000017919) EXOC1 (ENSOCUG00000017917) EXOC1L (ENSOCUG00000035186) ENSOCUG00000035473 NMU (ENSOCUG00000017128) #16 PDCL2 (ENSOCUG00000007651) #17 CLOCK (ENSOCUG00000022350) #18 ENSOCUG00000033450 TMEM165 (ENSOCUG00000013475) #20 ENSOCUG00000028005 #21 ENSOCUG00000031079 KDR (ENSOCUG00000005062) #22 KIT (ENSOCUG00000007086) METTL14 (ENSOCUG00000003062) SEC24D (ENSOCUG00000013272) SYNPO2 (ENSOCUG00000008953) MYOZ2 (ENSOCUG00000008959) USP53 (ENSOCUG00000013733) ENSOCUG00000030903 FABP2 (ENSOCUG00000003293) PDE5A (ENSOCUG00000009417) MAD2L1 (ENSOCUG00000008243) PRDM5 (ENSOCUG00000013454) ENSOCUG00000036546 NDNF (ENSOCUG00000002038) TNIP3 (ENSOCUG00000001973) QRFPR (ENSOCUG00000000563) Pika MODERN SPECIES 949 ENSOPRG00000014557 #22 Laurasiatheria ANCESTRAL SPECIES 11 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000156710 #22 Hedgehog MODERN SPECIES 2625 KDR (ENSEEUG00000006982) #22 Common shrew MODERN SPECIES 1948 KDR (ENSSARG00000014323) #22 Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Artiodactyla ANCESTRAL SPECIES 12 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Suina ANCESTRAL SPECIES 33 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00730000111450.g.a ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Pig MODERN SPECIES 16 ENSSSCG00000008855 CPE (ENSSSCG00000008854) ENSSSCG00000046178 TLL1 (ENSSSCG00000008853) MAP9 (ENSSSCG00000008852) ENSSSCG00000043541 ENSSSCG00000042370 ENSSSCG00000036417 ENSSSCG00000061357 ENSSSCG00000057119 ENSSSCG00000008892 ENSSSCG00000008850 ENSSSCG00000053955 ENSSSCG00000034355 ENSSSCG00000008845 #21 KDR (ENSSSCG00000008844) #22 KIT (ENSSSCG00000008842) PDGFRA (ENSSSCG00000008841) GSX2 (ENSSSCG00000008840) CHIC2 (ENSSSCG00000032645) LNX1 (ENSSSCG00000008838) ENSSSCG00000031636 SCFD2 (ENSSSCG00000008836) RASL11B (ENSSSCG00000008835) ENSSSCG00000021623 USP46 (ENSSSCG00000036284) SPATA18 (ENSSSCG00000008834) SGCB (ENSSSCG00000058015) ENSSSCG00000008832 DCUN1D4 (ENSSSCG00000008831) CWH43 (ENSSSCG00000008830) Chacoan peccary MODERN SPECIES 960 ENSCWAG00000015393 SRD5A3 (ENSCWAG00000015352) #21 KDR (ENSCWAG00000015114) #22 KIT (ENSCWAG00000014775) PDGFRA (ENSCWAG00000014703) GSX2 (ENSCWAG00000014666) CHIC2 (ENSCWAG00000014605) LNX1 (ENSCWAG00000014427) FIP1L1 (ENSCWAG00000013864) SCFD2 (ENSCWAG00000013750) RASL11B (ENSCWAG00000013658) ENSCWAG00000013604 USP46 (ENSCWAG00000013332) SPATA18 (ENSCWAG00000012879) SGCB (ENSCWAG00000012789) LRRC66 (ENSCWAG00000012693) DCUN1D4 (ENSCWAG00000012514) CWH43 (ENSCWAG00000012257) Artiodactyla_a ANCESTRAL SPECIES 12 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Artiodactyla_b ANCESTRAL SPECIES 16 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Cetacea ANCESTRAL SPECIES 12 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Odontoceti ANCESTRAL SPECIES 11 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00440000038159.qb ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039.a.a #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Odontoceti_a ANCESTRAL SPECIES 23 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00440000038159.qb ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039.a.a #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00440000038159.qb ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039.a.a #19 ENSGT00390000005261 #20 ENSGT00500000044920.g #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Monodontidae ANCESTRAL SPECIES 9 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00440000038159.qb ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039.a.a #19 ENSGT00390000005261 #20 ENSGT00500000044920.g #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Narwhal MODERN SPECIES 307 SRP72 (ENSMMNG00015012225) PAICS (ENSMMNG00015012325) PPAT (ENSMMNG00015012362) ENSMMNG00015012406 AASDH (ENSMMNG00015012429) CRACD (ENSMMNG00015012549) ENSMMNG00015012615 CEP135 (ENSMMNG00015012654) EXOC1 (ENSMMNG00015012800) EXOC1L (ENSMMNG00015012879) NMU (ENSMMNG00015012920) #16 PDCL2 (ENSMMNG00015012976) #17 CLOCK (ENSMMNG00015012990) #18 TMEM165 (ENSMMNG00015013015) #20 ENSMMNG00015013038 #21 KDR (ENSMMNG00015013066) #22 KIT (ENSMMNG00015013144) PDGFRA (ENSMMNG00015013167) GSX2 (ENSMMNG00015013194) CHIC2 (ENSMMNG00015013218) LNX1 (ENSMMNG00015013246) ENSMMNG00015013310 SCFD2 (ENSMMNG00015013410) RASL11B (ENSMMNG00015013438) USP46 (ENSMMNG00015013470) ENSMMNG00015013502 SPATA18 (ENSMMNG00015013524) SGCB (ENSMMNG00015013564) LRRC66 (ENSMMNG00015013581) DCUN1D4 (ENSMMNG00015013609) CWH43 (ENSMMNG00015013652) Beluga whale MODERN SPECIES 77 THEGL (ENSDLEG00000013936) ARL9 (ENSDLEG00000014007) SRP72 (ENSDLEG00000014021) ENSDLEG00000014072 ENSDLEG00000014169 AASDH (ENSDLEG00000014259) KIAA1211 (ENSDLEG00000014302) CEP135 (ENSDLEG00000014370) EXOC1 (ENSDLEG00000014416) EXOC1L (ENSDLEG00000014446) PDCL2 (ENSDLEG00000014453) #17 CLOCK (ENSDLEG00000014479) #18 ENSDLEG00000014547 #19 TMEM165 (ENSDLEG00000014557) #20 ENSDLEG00000014576 #21 KDR (ENSDLEG00000014628) #22 KIT (ENSDLEG00000014712) PDGFRA (ENSDLEG00000014750) GSX2 (ENSDLEG00000014788) CHIC2 (ENSDLEG00000014791) LNX1 (ENSDLEG00000014802) FIP1L1 (ENSDLEG00000014828) SCFD2 (ENSDLEG00000014865) RASL11B (ENSDLEG00000014914) USP46 (ENSDLEG00000014941) ENSDLEG00000014974 ENSDLEG00000014987 ENSDLEG00000015009 SGCB (ENSDLEG00000015019) LRRC66 (ENSDLEG00000015035) DCUN1D4 (ENSDLEG00000007941) Vaquita MODERN SPECIES 16 PAICS (ENSPSNG00000001214) ENSPSNG00000001197 ENSPSNG00000001179 AASDH (ENSPSNG00000001136) CRACD (ENSPSNG00000000906) ENSPSNG00000000807 CEP135 (ENSPSNG00000000783) EXOC1 (ENSPSNG00000000713) EXOC1L (ENSPSNG00000000657) NMU (ENSPSNG00000000572) #16 PDCL2 (ENSPSNG00000000496) #17 CLOCK (ENSPSNG00000000466) #18 ENSPSNG00000000412 #19 TMEM165 (ENSPSNG00000000395) #20 ENSPSNG00000000366 #21 KDR (ENSPSNG00000000325) #22 KIT (ENSPSNG00000000276) PDGFRA (ENSPSNG00000000217) GSX2 (ENSPSNG00000000136) CHIC2 (ENSPSNG00000000109) LNX1 (ENSPSNG00000005217) FIP1L1 (ENSPSNG00000005133) SCFD2 (ENSPSNG00000005058) RASL11B (ENSPSNG00000005019) USP46 (ENSPSNG00000004926) SPATA18 (ENSPSNG00000004807) SGCB (ENSPSNG00000004745) LRRC66 (ENSPSNG00000004722) DCUN1D4 (ENSPSNG00000004664) CWH43 (ENSPSNG00000004578) OCIAD2 (ENSPSNG00000004549) Dolphin MODERN SPECIES 4142 KDR (ENSTTRG00000002449) #22 Sperm whale MODERN SPECIES 18 PAICS (ENSPCTG00005004385) PPAT (ENSPCTG00005004431) ENSPCTG00005004475 AASDH (ENSPCTG00005004515) CRACD (ENSPCTG00005004658) ENSPCTG00005004860 CEP135 (ENSPCTG00005004883) EXOC1 (ENSPCTG00005004932) EXOC1L (ENSPCTG00005005136) NMU (ENSPCTG00005005187) #16 PDCL2 (ENSPCTG00005005309) #17 CLOCK (ENSPCTG00005005343) #18 ENSPCTG00005005382 #19 TMEM165 (ENSPCTG00005005392) #20 SRD5A3 (ENSPCTG00005005446) #21 KDR (ENSPCTG00005005473) #22 KIT (ENSPCTG00005005506) ENSPCTG00005005580 PDGFRA (ENSPCTG00005005611) GSX2 (ENSPCTG00005005685) CHIC2 (ENSPCTG00005005704) LNX1 (ENSPCTG00005005759) FIP1L1 (ENSPCTG00005005849) SCFD2 (ENSPCTG00005005926) RASL11B (ENSPCTG00005006028) USP46 (ENSPCTG00005006091) SPATA18 (ENSPCTG00005006266) SGCB (ENSPCTG00005006339) LRRC66 (ENSPCTG00005006377) DCUN1D4 (ENSPCTG00005006440) ENSPCTG00005006507 Blue whale MODERN SPECIES 16 ARL9 (ENSBMSG00010000197) ENSBMSG00010000244 PAICS (ENSBMSG00010000291) PPAT (ENSBMSG00010000340) ENSBMSG00010000372 AASDH (ENSBMSG00010000413) CRACD (ENSBMSG00010000579) CEP135 (ENSBMSG00010001197) EXOC1 (ENSBMSG00010001230) EXOC1L (ENSBMSG00010001265) NMU (ENSBMSG00010001314) #16 PDCL2 (ENSBMSG00010001519) #17 CLOCK (ENSBMSG00010001545) #18 TMEM165 (ENSBMSG00010001577) #20 SRD5A3 (ENSBMSG00010001627) #21 KDR (ENSBMSG00010001647) #22 KIT (ENSBMSG00010001699) PDGFRA (ENSBMSG00010001797) GSX2 (ENSBMSG00010001890) CHIC2 (ENSBMSG00010001906) LNX1 (ENSBMSG00010001954) FIP1L1 (ENSBMSG00010002026) SCFD2 (ENSBMSG00010002107) RASL11B (ENSBMSG00010002125) ENSBMSG00010002177 SPATA18 (ENSBMSG00010002257) SGCB (ENSBMSG00010002296) LRRC66 (ENSBMSG00010002339) DCUN1D4 (ENSBMSG00010002390) CWH43 (ENSBMSG00010002456) OCIAD2 (ENSBMSG00010002503) Pecora ANCESTRAL SPECIES 15 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Percora_a ANCESTRAL SPECIES 18 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000168854 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Bovidae ANCESTRAL SPECIES 18 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000168854 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Caprinae ANCESTRAL SPECIES 13 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172.z ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453.d ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00910000147676 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Goat MODERN SPECIES 25 SRP72 (ENSCHIG00000021465) ENSCHIG00000012259 ENSCHIG00000013585 AASDH (ENSCHIG00000022349) CRACD (ENSCHIG00000010537) CEP135 (ENSCHIG00000020429) ENSCHIG00000009115 EXOC1 (ENSCHIG00000022016) EXOC1L (ENSCHIG00000009195) ENSCHIG00000021229 NMU (ENSCHIG00000012702) #16 PDCL2 (ENSCHIG00000025455) #17 CLOCK (ENSCHIG00000017027) #18 TMEM165 (ENSCHIG00000026960) #20 SRD5A3 (ENSCHIG00000019579) #21 KDR (ENSCHIG00000006477) #22 ENSCHIG00000007998 KIT (ENSCHIG00000022287) PDGFRA (ENSCHIG00000005194) GSX2 (ENSCHIG00000017735) CHIC2 (ENSCHIG00000002107) LNX1 (ENSCHIG00000017890) ENSCHIG00000025903 SCFD2 (ENSCHIG00000015721) RASL11B (ENSCHIG00000024365) USP46 (ENSCHIG00000019211) ENSCHIG00000025743 ENSCHIG00000015328 ENSCHIG00000008028 SPATA18 (ENSCHIG00000019427) SGCB (ENSCHIG00000025818) Rambouillet Sheep MODERN SPECIES 22 ENSOARG00020019924 THEGL (ENSOARG00020019845) SRP72 (ENSOARG00020019666) ENSOARG00020019566 AASDH (ENSOARG00020019446) CEP135 (ENSOARG00020018779) ENSOARG00020018714 EXOC1 (ENSOARG00020018015) EXOC1L (ENSOARG00020017950) ENSOARG00020017902 NMU (ENSOARG00020017194) #16 PDCL2 (ENSOARG00020017078) #17 CLOCK (ENSOARG00020016714) #18 TMEM165 (ENSOARG00020016524) #20 SRD5A3 (ENSOARG00020016453) #21 KDR (ENSOARG00020015634) #22 KIT (ENSOARG00020015287) ENSOARG00020015240 PDGFRA (ENSOARG00020015079) ENSOARG00020015027 GSX2 (ENSOARG00020014973) CHIC2 (ENSOARG00020014893) LNX1 (ENSOARG00020014691) SCFD2 (ENSOARG00020013824) USP46 (ENSOARG00020013318) ENSOARG00020013200 SPATA18 (ENSOARG00020013016) SGCB (ENSOARG00020012938) LRRC66 (ENSOARG00020012901) DCUN1D4 (ENSOARG00020012554) OCIAD2 (ENSOARG00020012338) Bovinae ANCESTRAL SPECIES 15 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000168854 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Bos ANCESTRAL SPECIES 15 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Bos_a ANCESTRAL SPECIES 21 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00960000190735 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Wild yak MODERN SPECIES 1057 PPAT (ENSBMUG00000007143) ENSBMUG00000007154 AASDH (ENSBMUG00000007208) CRACD (ENSBMUG00000007253) ENSBMUG00000007267 CEP135 (ENSBMUG00000007279) EXOC1 (ENSBMUG00000007351) ENSBMUG00000007369 EXOC1L (ENSBMUG00000007377) ENSBMUG00000007397 NMU (ENSBMUG00000007461) #16 PDCL2 (ENSBMUG00000007483) #17 CLOCK (ENSBMUG00000007505) #18 TMEM165 (ENSBMUG00000007528) #20 SRD5A3 (ENSBMUG00000007534) #21 KDR (ENSBMUG00000007540) #22 Domestic yak MODERN SPECIES 25 ENSBGRG00000022299 AASDH (ENSBGRG00000022332) ENSBGRG00000022431 CEP135 (ENSBGRG00000022568) EXOC1 (ENSBGRG00000023083) ENSBGRG00000023272 EXOC1L (ENSBGRG00000023320) ENSBGRG00000023358 NMU (ENSBGRG00000023379) #16 PDCL2 (ENSBGRG00000023560) #17 ENSBGRG00000023580 CLOCK (ENSBGRG00000023603) #18 ENSBGRG00000023674 TMEM165 (ENSBGRG00000023695) #20 SRD5A3 (ENSBGRG00000023773) #21 KDR (ENSBGRG00000023842) #22 KIT (ENSBGRG00000023915) ENSBGRG00000024188 PDGFRA (ENSBGRG00000024258) GSX2 (ENSBGRG00000024694) CHIC2 (ENSBGRG00000024725) LNX1 (ENSBGRG00000024797) ENSBGRG00000024926 SCFD2 (ENSBGRG00000025260) RASL11B (ENSBGRG00000025282) USP46 (ENSBGRG00000025311) ENSBGRG00000025365 SPATA18 (ENSBGRG00000000356) SGCB (ENSBGRG00000000392) LRRC66 (ENSBGRG00000000416) ENSBGRG00000000436 Bos_b ANCESTRAL SPECIES 14 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000154694.`b ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00940000154598.ac.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Hybrid Bos Indicus MODERN SPECIES 25 ENSBIXG00005008711 PPAT (ENSBIXG00005008741) AASDH (ENSBIXG00005008765) CRACD (ENSBIXG00005006763) CEP135 (ENSBIXG00005008904) EXOC1 (ENSBIXG00005009097) ENSBIXG00005000404 EXOC1L (ENSBIXG00005009164) NMU (ENSBIXG00005009233) #16 ENSBIXG00005009252 PDCL2 (ENSBIXG00005000440) #17 ENSBIXG00005006706 CLOCK (ENSBIXG00005009314) #18 TMEM165 (ENSBIXG00005000487) #20 SRD5A3 (ENSBIXG00005009359) #21 KDR (ENSBIXG00005009386) #22 KIT (ENSBIXG00005009446) PDGFRA (ENSBIXG00005009519) ENSBIXG00005009536 GSX2 (ENSBIXG00005009557) CHIC2 (ENSBIXG00005009594) ENSBIXG00005009618 LNX1 (ENSBIXG00005009701) ENSBIXG00005009810 ENSBIXG00005009835 SCFD2 (ENSBIXG00005000644) RASL11B (ENSBIXG00005000664) ENSBIXG00005009892 ENSBIXG00005009914 USP46 (ENSBIXG00005009949) ENSBIXG00005000725 Cow MODERN SPECIES 25 SRP72 (ENSBTAG00000010593) PAICS (ENSBTAG00000010577) PPAT (ENSBTAG00000010571) AASDH (ENSBTAG00000020583) CRACD (ENSBTAG00000040398) CEP135 (ENSBTAG00000009471) EXOC1 (ENSBTAG00000032637) ENSBTAG00000022199 EXOC1L (ENSBTAG00000045602) NMU (ENSBTAG00000044161) #16 ENSBTAG00000054466 PDCL2 (ENSBTAG00000001772) #17 CLOCK (ENSBTAG00000044044) #18 TMEM165 (ENSBTAG00000001269) #20 SRD5A3 (ENSBTAG00000014913) #21 KDR (ENSBTAG00000000782) #22 KIT (ENSBTAG00000002699) PDGFRA (ENSBTAG00000007173) GSX2 (ENSBTAG00000045812) CHIC2 (ENSBTAG00000032660) LNX1 (ENSBTAG00000020658) FIP1L1 (ENSBTAG00000020653) SCFD2 (ENSBTAG00000020648) RASL11B (ENSBTAG00000020647) USP46 (ENSBTAG00000003443) ENSBTAG00000051171 SPATA18 (ENSBTAG00000018106) SGCB (ENSBTAG00000014601) LRRC66 (ENSBTAG00000014599) DCUN1D4 (ENSBTAG00000001600) CWH43 (ENSBTAG00000021347) American bison MODERN SPECIES 3318 PAICS (ENSBBBG00000019953) PPAT (ENSBBBG00000019920) ENSBBBG00000019909 ENSBBBG00000019902 AASDH (ENSBBBG00000005384) ENSBBBG00000005358 ENSBBBG00000019782 CEP135 (ENSBBBG00000019772) EXOC1 (ENSBBBG00000019735) EXOC1L (ENSBBBG00000019666) NMU (ENSBBBG00000005197) #16 PDCL2 (ENSBBBG00000019569) #17 CLOCK (ENSBBBG00000005300) #18 TMEM165 (ENSBBBG00000005203) #20 SRD5A3 (ENSBBBG00000019492) #21 KDR (ENSBBBG00000005252) #22 KIT (ENSBBBG00000009185) PDGFRA (ENSBBBG00000019371) GSX2 (ENSBBBG00000019352) CHIC2 (ENSBBBG00000005062) LNX1 (ENSBBBG00000008518) FIP1L1 (ENSBBBG00000005000) SCFD2 (ENSBBBG00000019210) RASL11B (ENSBBBG00000019189) USP46 (ENSBBBG00000004938) SPATA18 (ENSBBBG00000008168) SGCB (ENSBBBG00000004927) LRRC66 (ENSBBBG00000019144) Siberian musk deer MODERN SPECIES 1266 PPAT (ENSMMSG00000024306) ENSMMSG00000024308 ENSMMSG00000024310 AASDH (ENSMMSG00000024311) ENSMMSG00000024316 ENSMMSG00000024317 CEP135 (ENSMMSG00000024320) EXOC1 (ENSMMSG00000024323) EXOC1L (ENSMMSG00000024327) NMU (ENSMMSG00000024331) #16 PDCL2 (ENSMMSG00000024349) #17 CLOCK (ENSMMSG00000020910) #18 TMEM165 (ENSMMSG00000021016) #20 SRD5A3 (ENSMMSG00000021061) #21 ENSMMSG00000021085 KDR (ENSMMSG00000021120) #22 KIT (ENSMMSG00000021225) PDGFRA (ENSMMSG00000021277) ENSMMSG00000021324 GSX2 (ENSMMSG00000021348) CHIC2 (ENSMMSG00000021379) ENSMMSG00000021416 LNX1 (ENSMMSG00000021431) ENSMMSG00000021486 SCFD2 (ENSMMSG00000021640) RASL11B (ENSMMSG00000021670) USP46 (ENSMMSG00000021696) SPATA18 (ENSMMSG00000021782) SGCB (ENSMMSG00000021920) LRRC66 (ENSMMSG00000021932) ENSMMSG00000021970 Yarkand deer MODERN SPECIES 29 PPAT (ENSCHYG00000017831) AASDH (ENSCHYG00000017692) ENSCHYG00000017672 CRACD (ENSCHYG00000017500) ENSCHYG00000017453 CEP135 (ENSCHYG00000016897) EXOC1 (ENSCHYG00000016173) EXOC1L (ENSCHYG00000015920) NMU (ENSCHYG00000015577) #16 PDCL2 (ENSCHYG00000015434) #17 ENSCHYG00000015403 CLOCK (ENSCHYG00000015094) #18 TMEM165 (ENSCHYG00000014938) #20 SRD5A3 (ENSCHYG00000014865) #21 ENSCHYG00000014804 KDR (ENSCHYG00000014384) #22 KIT (ENSCHYG00000013749) PDGFRA (ENSCHYG00000013443) GSX2 (ENSCHYG00000013391) CHIC2 (ENSCHYG00000013311) LNX1 (ENSCHYG00000013037) ENSCHYG00000012400 SCFD2 (ENSCHYG00000012125) ENSCHYG00000012033 USP46 (ENSCHYG00000011853) SPATA18 (ENSCHYG00000011770) SGCB (ENSCHYG00000011679) LRRC66 (ENSCHYG00000011643) ENSCHYG00000011256 CWH43 (ENSCHYG00000011014) ENSCHYG00000010946 Camelidae ANCESTRAL SPECIES 22 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Arabian camel MODERN SPECIES 11 ENSCDRG00005001502 PAICS (ENSCDRG00005001516) PPAT (ENSCDRG00005001530) ENSCDRG00005001539 AASDH (ENSCDRG00005001547) ENSCDRG00005001601 CEP135 (ENSCDRG00005001801) EXOC1 (ENSCDRG00005001838) EXOC1L (ENSCDRG00005001951) NMU (ENSCDRG00005001974) #16 PDCL2 (ENSCDRG00005001989) #17 CLOCK (ENSCDRG00005002007) #18 ENSCDRG00005002035 #19 TMEM165 (ENSCDRG00005002040) #20 SRD5A3 (ENSCDRG00005002056) #21 KDR (ENSCDRG00005002066) #22 KIT (ENSCDRG00005002100) PDGFRA (ENSCDRG00005002143) ENSCDRG00005002178 CHIC2 (ENSCDRG00005002192) LNX1 (ENSCDRG00005002225) ENSCDRG00005002298 SCFD2 (ENSCDRG00005002450) RASL11B (ENSCDRG00005002505) USP46 (ENSCDRG00005002550) SPATA18 (ENSCDRG00005002631) SGCB (ENSCDRG00005002679) LRRC66 (ENSCDRG00005002703) DCUN1D4 (ENSCDRG00005002732) CWH43 (ENSCDRG00005002773) OCIAD2 (ENSCDRG00005002794) Alpaca MODERN SPECIES 1311 CEP135 (ENSVPAG00000006446) EXOC1 (ENSVPAG00000006443) NMU (ENSVPAG00000006441) #16 PDCL2 (ENSVPAG00000006440) #17 CLOCK (ENSVPAG00000006438) #18 TMEM165 (ENSVPAG00000006437) #20 SRD5A3 (ENSVPAG00000006436) #21 KDR (ENSVPAG00000006435) #22 KIT (ENSVPAG00000006432) Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Carnivora ANCESTRAL SPECIES 5 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Caniformia ANCESTRAL SPECIES 7 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Caniformia_b ANCESTRAL SPECIES 5 ENSGT00940000159397.d ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b.o ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Ursidae ANCESTRAL SPECIES 29 ENSGT00940000159397.d ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b.o ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Ursus ANCESTRAL SPECIES 51 ENSGT00940000159397.d ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b.o ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b American black bear MODERN SPECIES 3508 ENSUAMG00000018152 SRD5A3 (ENSUAMG00000018151) #21 KDR (ENSUAMG00000018150) #22 Polar bear MODERN SPECIES 234 SRP72 (ENSUMAG00000008151) PAICS (ENSUMAG00000008003) ENSUMAG00000007992 ENSUMAG00000007988 PPAT (ENSUMAG00000007982) AASDH (ENSUMAG00000007970) CRACD (ENSUMAG00000007889) CEP135 (ENSUMAG00000007857) EXOC1 (ENSUMAG00000006898) EXOC1L (ENSUMAG00000006777) NMU (ENSUMAG00000006770) #16 PDCL2 (ENSUMAG00000006766) #17 CLOCK (ENSUMAG00000006220) #18 TMEM165 (ENSUMAG00000006121) #20 SRD5A3 (ENSUMAG00000006102) #21 KDR (ENSUMAG00000005658) #22 KIT (ENSUMAG00000003838) PDGFRA (ENSUMAG00000003589) CHIC2 (ENSUMAG00000003571) LNX1 (ENSUMAG00000003515) ENSUMAG00000002758 ENSUMAG00000002706 ENSUMAG00000002701 USP46 (ENSUMAG00000002673) SPATA18 (ENSUMAG00000002644) SGCB (ENSUMAG00000002628) ENSUMAG00000002626 DCUN1D4 (ENSUMAG00000002532) CWH43 (ENSUMAG00000002461) OCIAD2 (ENSUMAG00000002455) OCIAD1 (ENSUMAG00000002446) Giant Panda MODERN SPECIES 2 ARL9 (ENSAMEG00000008523) SRP72 (ENSAMEG00000008469) ENSAMEG00000008439 PPAT (ENSAMEG00000008404) ENSAMEG00000020262 AASDH (ENSAMEG00000008375) CRACD (ENSAMEG00000008359) CEP135 (ENSAMEG00000008299) EXOC1 (ENSAMEG00000008260) EXOC1L (ENSAMEG00000008259) NMU (ENSAMEG00000018424) #16 PDCL2 (ENSAMEG00000018422) #17 CLOCK (ENSAMEG00000018420) #18 TMEM165 (ENSAMEG00000018419) #20 SRD5A3 (ENSAMEG00000031461) #21 KDR (ENSAMEG00000018407) #22 KIT (ENSAMEG00000018372) PDGFRA (ENSAMEG00000018351) GSX2 (ENSAMEG00000025732) CHIC2 (ENSAMEG00000018348) LNX1 (ENSAMEG00000008041) ENSAMEG00000008072 ENSAMEG00000029850 SCFD2 (ENSAMEG00000008113) RASL11B (ENSAMEG00000008116) ENSAMEG00000008131 SPATA18 (ENSAMEG00000008174) SGCB (ENSAMEG00000008182) ENSAMEG00000026090 DCUN1D4 (ENSAMEG00000008209) CWH43 (ENSAMEG00000008221) Mustelinae ANCESTRAL SPECIES 63 ENSGT00940000159397.d ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b.o ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Ferret MODERN SPECIES 376 PAICS (ENSMPUG00000004843) PPAT (ENSMPUG00000004919) ENSMPUG00000004934 AASDH (ENSMPUG00000004939) CRACD (ENSMPUG00000005013) CEP135 (ENSMPUG00000005044) EXOC1 (ENSMPUG00000005058) EXOC1L (ENSMPUG00000005069) ENSMPUG00000005075 NMU (ENSMPUG00000005077) #16 PDCL2 (ENSMPUG00000005085) #17 CLOCK (ENSMPUG00000005091) #18 TMEM165 (ENSMPUG00000005115) #20 SRD5A3 (ENSMPUG00000005123) #21 ENSMPUG00000005130 KDR (ENSMPUG00000005172) #22 American mink MODERN SPECIES 36 PAICS (ENSNVIG00000014905) ENSNVIG00000014894 ENSNVIG00000014891 PPAT (ENSNVIG00000014855) AASDH (ENSNVIG00000014818) CRACD (ENSNVIG00000014697) CEP135 (ENSNVIG00000014670) EXOC1 (ENSNVIG00000014472) EXOC1L (ENSNVIG00000014460) NMU (ENSNVIG00000014304) #16 PDCL2 (ENSNVIG00000014277) #17 CLOCK (ENSNVIG00000014200) #18 ENSNVIG00000014196 #20 ENSNVIG00000014184 #20 SRD5A3 (ENSNVIG00000014170) #21 KDR (ENSNVIG00000014095) #22 KIT (ENSNVIG00000014054) PDGFRA (ENSNVIG00000014002) GSX2 (ENSNVIG00000013995) CHIC2 (ENSNVIG00000013967) LNX1 (ENSNVIG00000013941) ENSNVIG00000013777 SCFD2 (ENSNVIG00000013759) RASL11B (ENSNVIG00000013741) ENSNVIG00000013705 SPATA18 (ENSNVIG00000013671) SGCB (ENSNVIG00000013663) ENSNVIG00000013642 DCUN1D4 (ENSNVIG00000013585) CWH43 (ENSNVIG00000013526) OCAD2 (ENSNVIG00000013479) Canidae ANCESTRAL SPECIES 51 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000154277.a.b.b ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Canis_lupus ANCESTRAL SPECIES 19 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Dog MODERN SPECIES 4 ARL9 (ENSCAFG00845013838) SRP72 (ENSCAFG00845013778) ENSCAFG00845013641 PPAT (ENSCAFG00845013561) AASDH (ENSCAFG00845013462) PAICS (ENSCAFG00845013190) ENSCAFG00845013140 CEP135 (ENSCAFG00845013097) EXOC1 (ENSCAFG00845012783) EXOC1L (ENSCAFG00845012675) ENSCAFG00845012506 #16 PDCL2 (ENSCAFG00845012470) #17 CLOCK (ENSCAFG00845012371) #18 TMEM165 (ENSCAFG00845012298) #20 SRD5A3 (ENSCAFG00845012266) #21 KDR (ENSCAFG00845012083) #22 KIT (ENSCAFG00845011904) PDGFRA (ENSCAFG00845011775) GSX2 (ENSCAFG00845011743) CHIC2 (ENSCAFG00845011712) LNX1 (ENSCAFG00845011670) FIP1L1 (ENSCAFG00845011572) SCFD2 (ENSCAFG00845011397) RASL11B (ENSCAFG00845011251) USP46 (ENSCAFG00845011008) SPATA18 (ENSCAFG00845010886) SGCB (ENSCAFG00845010845) ENSCAFG00845010819 DCUN1D4 (ENSCAFG00845010697) CWH43 (ENSCAFG00845010559) OCIAD2 (ENSCAFG00845010489) Dingo MODERN SPECIES 2 ENSCAFG00020027391 ENSCAFG00020027392 AASDH (ENSCAFG00020027394) ENSCAFG00020027406 ENSCAFG00020027407 ENSCAFG00020027408 CEP135 (ENSCAFG00020027412) EXOC1 (ENSCAFG00020027483) EXOC1L (ENSCAFG00020027541) NMU (ENSCAFG00020027542) #16 PDCL2 (ENSCAFG00020027543) #17 CLOCK (ENSCAFG00020027545) #18 ENSCAFG00020027547 #19 TMEM165 (ENSCAFG00020000158) #20 SRD5A3 (ENSCAFG00020000287) #21 KDR (ENSCAFG00020000430) #22 KIT (ENSCAFG00020001613) PDGFRA (ENSCAFG00020001700) GSX2 (ENSCAFG00020001709) CHIC2 (ENSCAFG00020001719) LNX1 (ENSCAFG00020001736) ENSCAFG00020001745 SCFD2 (ENSCAFG00020001766) RASL11B (ENSCAFG00020001800) USP46 (ENSCAFG00020001811) SPATA18 (ENSCAFG00020001878) SGCB (ENSCAFG00020001898) DCUN1D4 (ENSCAFG00020001922) CWH43 (ENSCAFG00020001935) OCIAD2 (ENSCAFG00020002015) OCIAD1 (ENSCAFG00020002029) Red fox MODERN SPECIES 46 ENSVVUG00000006031 PPAT (ENSVVUG00000006040) AASDH (ENSVVUG00000006048) ENSVVUG00000006086 ENSVVUG00000006094 CEP135 (ENSVVUG00000006104) EXOC1 (ENSVVUG00000006129) EXOC1L (ENSVVUG00000006172) ENSVVUG00000006178 ENSVVUG00000006183 NMU (ENSVVUG00000006186) #16 PDCL2 (ENSVVUG00000006189) #17 CLOCK (ENSVVUG00000006192) #18 TMEM165 (ENSVVUG00000006222) #20 SRD5A3 (ENSVVUG00000006231) #21 KDR (ENSVVUG00000006238) #22 ENSVVUG00000006255 Felidae ANCESTRAL SPECIES 4 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000154694.i.b ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00870000136875 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Panthera ANCESTRAL SPECIES 5 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000154694.i.b ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Panthera_a ANCESTRAL SPECIES 2 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000154694.i.b ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 lion MODERN SPECIES 4 ENSPLOG00000004320 SRP72 (ENSPLOG00000004272) PAICS (ENSPLOG00000004213) ENSPLOG00000004203 PPAT (ENSPLOG00000004193) AASDH (ENSPLOG00000004176) CRACD (ENSPLOG00000004162) CEP135 (ENSPLOG00000004109) EXOC1 (ENSPLOG00000004076) EXOC1L (ENSPLOG00000004058) NMU (ENSPLOG00000003965) #16 PDCL2 (ENSPLOG00000003923) #17 CLOCK (ENSPLOG00000003907) #18 TMEM165 (ENSPLOG00000003883) #20 SRD5A3 (ENSPLOG00000003868) #21 KDR (ENSPLOG00000003825) #22 KIT (ENSPLOG00000003794) ENSPLOG00000003776 PDGFRA (ENSPLOG00000003742) GSX2 (ENSPLOG00000003713) CHIC2 (ENSPLOG00000003696) LNX1 (ENSPLOG00000003661) FIP1L1 (ENSPLOG00000003542) SCFD2 (ENSPLOG00000003440) RASL11B (ENSPLOG00000003416) ENSPLOG00000003341 USP46 (ENSPLOG00000003281) SPATA18 (ENSPLOG00000003154) SGCB (ENSPLOG00000003110) LRRC66 (ENSPLOG00000003082) DCUN1D4 (ENSPLOG00000003028) leopard MODERN SPECIES 2 ENSPPRG00000017715 SRP72 (ENSPPRG00000015991) PAICS (ENSPPRG00000014288) PPAT (ENSPPRG00000013619) AASDH (ENSPPRG00000013116) CRACD (ENSPPRG00000010895) CEP135 (ENSPPRG00000009012) EXOC1 (ENSPPRG00000008449) ENSPPRG00000008233 EXOC1L (ENSPPRG00000007673) NMU (ENSPPRG00000007536) #16 PDCL2 (ENSPPRG00000006963) #17 CLOCK (ENSPPRG00000006916) #18 TMEM165 (ENSPPRG00000005927) #20 SRD5A3 (ENSPPRG00000005520) #21 KDR (ENSPPRG00000005424) #22 KIT (ENSPPRG00000004930) PDGFRA (ENSPPRG00000004078) ENSPPRG00000003939 GSX2 (ENSPPRG00000003871) CHIC2 (ENSPPRG00000003452) LNX1 (ENSPPRG00000003037) FIP1L1 (ENSPPRG00000002221) SCFD2 (ENSPPRG00000000228) RASL11B (ENSPPRG00000023266) USP46 (ENSPPRG00000023778) SPATA18 (ENSPPRG00000024100) SGCB (ENSPPRG00000024271) LRRC66 (ENSPPRG00000024319) DCUN1D4 (ENSPPRG00000024436) CWH43 (ENSPPRG00000024574) Tiger MODERN SPECIES 70 ARL9 (ENSPTIG00000017426) SRP72 (ENSPTIG00000018786) PAICS (ENSPTIG00000020595) PPAT (ENSPTIG00000021270) ENSPTIG00000005874 AASDH (ENSPTIG00000021513) CRACD (ENSPTIG00000004246) CEP135 (ENSPTIG00000006900) EXOC1 (ENSPTIG00000008114) EXOC1L (ENSPTIG00000008693) NMU (ENSPTIG00000009380) #16 PDCL2 (ENSPTIG00000012820) #17 CLOCK (ENSPTIG00000013043) #18 TMEM165 (ENSPTIG00000013651) #20 SRD5A3 (ENSPTIG00000014194) #21 KDR (ENSPTIG00000014834) #22 KIT (ENSPTIG00000015998) PDGFRA (ENSPTIG00000019036) CHIC2 (ENSPTIG00000020211) Cat MODERN SPECIES 235 THEGL (ENSFCAG00000023281) ARL9 (ENSFCAG00000001942) SRP72 (ENSFCAG00000027600) PAICS (ENSFCAG00000028186) PPAT (ENSFCAG00000026916) AASDH (ENSFCAG00000006574) CRACD (ENSFCAG00000006569) CEP135 (ENSFCAG00000014189) EXOC1 (ENSFCAG00000018823) EXOC1L (ENSFCAG00000034057) NMU (ENSFCAG00000034809) #16 PDCL2 (ENSFCAG00000024688) #17 CLOCK (ENSFCAG00000001064) #18 TMEM165 (ENSFCAG00000029712) #20 SRD5A3 (ENSFCAG00000028749) #21 KDR (ENSFCAG00000009679) #22 KIT (ENSFCAG00000003112) PDGFRA (ENSFCAG00000009141) ENSFCAG00000024388 GSX2 (ENSFCAG00000025271) CHIC2 (ENSFCAG00000045270) LNX1 (ENSFCAG00000007897) FIP1L1 (ENSFCAG00000022148) SCFD2 (ENSFCAG00000007895) RASL11B (ENSFCAG00000045595) ERVMER34-1 (ENSFCAG00000042785) USP46 (ENSFCAG00000014294) SPATA18 (ENSFCAG00000006689) SGCB (ENSFCAG00000027835) ENSFCAG00000042278 DCUN1D4 (ENSFCAG00000023410) Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Equus ANCESTRAL SPECIES 12 ENSGT00940000159397 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00950000183144.A.i.a.b.f ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Horse MODERN SPECIES 22 ENSECAG00000055241 SRP72 (ENSECAG00000006920) PAICS (ENSECAG00000019862) PPAT (ENSECAG00000023644) ENSECAG00000001025 CRACD (ENSECAG00000013781) AASDH (ENSECAG00000009502) CEP135 (ENSECAG00000014393) EXOC1 (ENSECAG00000023793) EXOC1L (ENSECAG00000035811) NMU (ENSECAG00000025148) #16 PDCL2 (ENSECAG00000025160) #17 CLOCK (ENSECAG00000006331) #18 TMEM165 (ENSECAG00000018843) #20 SRD5A3 (ENSECAG00000047094) #21 KDR (ENSECAG00000019429) #22 ENSECAG00000011833 KIT (ENSECAG00000012032) PDGFRA (ENSECAG00000018176) CHIC2 (ENSECAG00000014019) GSX2 (ENSECAG00000013430) LNX1 (ENSECAG00000017017) FIP1L1 (ENSECAG00000019415) SCFD2 (ENSECAG00000002235) RASL11B (ENSECAG00000003789) USP46 (ENSECAG00000009006) SPATA18 (ENSECAG00000017782) SGCB (ENSECAG00000020148) LRRC66 (ENSECAG00000022299) DCUN1D4 (ENSECAG00000023996) CWH43 (ENSECAG00000024870) Donkey MODERN SPECIES 22 THEGL (ENSEASG00005017742) ARL9 (ENSEASG00005036423) SRP72 (ENSEASG00005017747) ENSEASG00005017751 PPAT (ENSEASG00005017759) AASDH (ENSEASG00005017782) CRACD (ENSEASG00005017786) CEP135 (ENSEASG00005017805) EXOC1 (ENSEASG00005018001) EXOC1L (ENSEASG00005018850) NMU (ENSEASG00005038160) #16 PDCL2 (ENSEASG00005018854) #17 CLOCK (ENSEASG00005018895) #18 TMEM165 (ENSEASG00005019466) #20 SRD5A3 (ENSEASG00005019468) #21 KDR (ENSEASG00005019475) #22 ENSEASG00005019484 KIT (ENSEASG00005019490) ENSEASG00005024773 PDGFRA (ENSEASG00005019499) GSX2 (ENSEASG00005019509) CHIC2 (ENSEASG00005033054) LNX1 (ENSEASG00005019513) ENSEASG00005019566 SCFD2 (ENSEASG00005019936) RASL11B (ENSEASG00005024651) USP46 (ENSEASG00005019951) SPATA18 (ENSEASG00005037001) SGCB (ENSEASG00005004301) LRRC66 (ENSEASG00005004297) DCUN1D4 (ENSEASG00005014327) Chiroptera ANCESTRAL SPECIES 9 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Megabat MODERN SPECIES 6083 KDR (ENSPVAG00000000715) #22 Microchiroptera ANCESTRAL SPECIES 10 ENSGT00390000013264.d ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00910000148039 #19 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248700 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Microbat MODERN SPECIES 1064 ENSMLUG00000003915 ENSMLUG00000024812 ARL9 (ENSMLUG00000007385) SRP72 (ENSMLUG00000007344) PAICS (ENSMLUG00000007316) PPAT (ENSMLUG00000007298) AASDH (ENSMLUG00000007266) CRACD (ENSMLUG00000007250) CEP135 (ENSMLUG00000015028) EXOC1 (ENSMLUG00000015012) EXOC1L (ENSMLUG00000022227) PDCL2 (ENSMLUG00000009499) #17 CLOCK (ENSMLUG00000010007) #18 TMEM165 (ENSMLUG00000009990) #20 SRD5A3 (ENSMLUG00000001485) #21 KDR (ENSMLUG00000013716) #22 ENSMLUG00000027233 KIT (ENSMLUG00000002438) ENSMLUG00000027786 PDGFRA (ENSMLUG00000006741) GSX2 (ENSMLUG00000006733) CHIC2 (ENSMLUG00000013335) ENSMLUG00000022409 LNX1 (ENSMLUG00000006515) ENSMLUG00000006503 ENSMLUG00000006497 ENSMLUG00000025132 RASL11B (ENSMLUG00000029138) ENSMLUG00000025730 USP46 (ENSMLUG00000004691) Greater horseshoe bat MODERN SPECIES 23 SRP72 (ENSRFEG00010004765) ENSRFEG00010004746 ENSRFEG00010004742 PPAT (ENSRFEG00010004725) AASDH (ENSRFEG00010004690) CRACD (ENSRFEG00010004644) CEP135 (ENSRFEG00010004587) EXOC1 (ENSRFEG00010004491) EXOC1L (ENSRFEG00010004444) NMU (ENSRFEG00010004411) #16 PDCL2 (ENSRFEG00010004389) #17 CLOCK (ENSRFEG00010004324) #18 ENSRFEG00010004298 #19 TMEM165 (ENSRFEG00010004276) #20 SRD5A3 (ENSRFEG00010004226) #21 KDR (ENSRFEG00010004198) #22 KIT (ENSRFEG00010004158) ENSRFEG00010004150 PDGFRA (ENSRFEG00010004089) GSX2 (ENSRFEG00010004072) CHIC2 (ENSRFEG00010004049) LNX1 (ENSRFEG00010004004) ENSRFEG00010003908 SCFD2 (ENSRFEG00010003724) RASL11B (ENSRFEG00010003705) USP46 (ENSRFEG00010003627) ENSRFEG00010003568 ENSRFEG00010003547 KLB (ENSRFEG00010003533) ENSRFEG00010003514 LIAS (ENSRFEG00010003448) Atlantogenata ANCESTRAL SPECIES 25 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000168854 ENSGT00940000159453 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Xenarthra ANCESTRAL SPECIES 68 ENSGT00390000017143 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 Sloth MODERN SPECIES 2255 KDR (ENSCHOG00000012579) #22 Armadillo MODERN SPECIES 1745 ENSDNOG00000013476 SRP72 (ENSDNOG00000039012) ENSDNOG00000013413 PPAT (ENSDNOG00000030817) AASDH (ENSDNOG00000005760) CRACD (ENSDNOG00000046885) ENSDNOG00000041994 CEP135 (ENSDNOG00000000371) EXOC1 (ENSDNOG00000016277) ENSDNOG00000042626 NMU (ENSDNOG00000043728) #16 PDCL2 (ENSDNOG00000011957) #17 CLOCK (ENSDNOG00000018101) #18 TMEM165 (ENSDNOG00000005563) #20 SRD5A3 (ENSDNOG00000013022) #21 KDR (ENSDNOG00000015773) #22 KIT (ENSDNOG00000016105) PDGFRA (ENSDNOG00000009157) GSX2 (ENSDNOG00000045933) CHIC2 (ENSDNOG00000036093) LNX1 (ENSDNOG00000004341) ENSDNOG00000038304 ENSDNOG00000046441 ENSDNOG00000033452 RASL11B (ENSDNOG00000030799) ENSDNOG00000033495 ENSDNOG00000033407 USP46 (ENSDNOG00000008788) SPATA18 (ENSDNOG00000046768) SGCB (ENSDNOG00000037564) LRRC66 (ENSDNOG00000043084) Afrotheria ANCESTRAL SPECIES 78 ENSGT00390000017143 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000168854 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Afrotheria_a ANCESTRAL SPECIES 77 ENSGT00390000017143 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000168854 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Elephant MODERN SPECIES 363 HOPX (ENSLAFG00000031146) ARL9 (ENSLAFG00000012646) SRP72 (ENSLAFG00000018307) PAICS (ENSLAFG00000021456) ENSLAFG00000032377 PPAT (ENSLAFG00000018301) AASDH (ENSLAFG00000018295) ENSLAFG00000018286 ENSLAFG00000015907 ENSLAFG00000028568 EXOC1 (ENSLAFG00000004516) PDCL2 (ENSLAFG00000023187) #17 CLOCK (ENSLAFG00000009558) #18 TMEM165 (ENSLAFG00000007259) #20 SRD5A3 (ENSLAFG00000030893) #21 KDR (ENSLAFG00000014443) #22 KIT (ENSLAFG00000022078) ENSLAFG00000011994 PDGFRA (ENSLAFG00000010795) ENSLAFG00000028670 CHIC2 (ENSLAFG00000012248) LNX1 (ENSLAFG00000002608) FIP1L1 (ENSLAFG00000002605) ENSLAFG00000029777 ENSLAFG00000008179 RASL11B (ENSLAFG00000008178) USP46 (ENSLAFG00000012660) SPATA18 (ENSLAFG00000000941) SGCB (ENSLAFG00000008897) LRRC66 (ENSLAFG00000008892) DCUN1D4 (ENSLAFG00000000325) Hyrax MODERN SPECIES 2051 KDR (ENSPCAG00000000886) #22 Tenrec MODERN SPECIES 2517 KDR (ENSETEG00000016586) #22 Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00530000063690.a.b.a.a.v Opossum MODERN SPECIES 4 PAICS (ENSMODG00000020695) PPAT (ENSMODG00000020693) ENSMODG00000040797 AASDH (ENSMODG00000020692) CRACD (ENSMODG00000020691) ENSMODG00000050686 CEP135 (ENSMODG00000020689) EXOC1 (ENSMODG00000020684) EXOC1L (ENSMODG00000029248) ENSMODG00000025530 #16 ENSMODG00000020680 #17 CLOCK (ENSMODG00000020678) #18 TMEM165 (ENSMODG00000020677) #20 SRD5A3 (ENSMODG00000037201) #21 ENSMODG00000029165 KDR (ENSMODG00000020673) #22 KIT (ENSMODG00000020671) PDGFRA (ENSMODG00000020670) GSX2 (ENSMODG00000050179) CHIC2 (ENSMODG00000020667) ENSMODG00000020663 LNX1 (ENSMODG00000020659) ENSMODG00000020654 ENSMODG00000020649 ENSMODG00000029714 ENSMODG00000024853 ENSMODG00000036443 ENSMODG00000048285 RASL11B (ENSMODG00000047546) ENSMODG00000044858 USP46 (ENSMODG00000020647) Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000003937.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00530000063690.a.b.a.a.v Diprotodontia ANCESTRAL SPECIES 10 ENSGT00390000013264 ENSGT00390000003937.d ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00530000063690.a.b.a.a.v Diprotodontia_a ANCESTRAL SPECIES 12 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000003937.d ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00530000063690.a.b.a.a.v Common wonbat MODERN SPECIES 1054 SRP72 (ENSVURG00010011102) ENSVURG00010011094 ENSVURG00010011086 ENSVURG00010011053 PPAT (ENSVURG00010011041) AASDH (ENSVURG00010011031) CRACD (ENSVURG00010011019) CEP135 (ENSVURG00010010965) EXOC1 (ENSVURG00010010890) EXOC1L (ENSVURG00010010868) ENSVURG00010010835 PDCL2 (ENSVURG00010010817) #17 CLOCK (ENSVURG00010010781) #18 TMEM165 (ENSVURG00010010706) #20 SRD5A3 (ENSVURG00010010694) #21 KDR (ENSVURG00010010655) #22 KIT (ENSVURG00010010615) PDGFRA (ENSVURG00010010553) GSX2 (ENSVURG00010010532) CHIC2 (ENSVURG00010010518) LNX1 (ENSVURG00010010480) ENSVURG00010010337 ENSVURG00010010317 ENSVURG00010010296 RASL11B (ENSVURG00010010287) USP46 (ENSVURG00010010270) SPATA18 (ENSVURG00010010234) SGCB (ENSVURG00010010202) ENSVURG00010010193 DCUN1D4 (ENSVURG00010010180) OCIAD2 (ENSVURG00010010169) koala MODERN SPECIES 270 ENSPCIG00000000761 SRP72 (ENSPCIG00000000732) ENSPCIG00000000708 ENSPCIG00000000678 PPAT (ENSPCIG00000000647) AASDH (ENSPCIG00000000634) CRACD (ENSPCIG00000000581) CEP135 (ENSPCIG00000000521) EXOC1 (ENSPCIG00000000447) EXOC1L (ENSPCIG00000000350) NMU (ENSPCIG00000000321) #16 PDCL2 (ENSPCIG00000000302) #17 CLOCK (ENSPCIG00000000224) #18 TMEM165 (ENSPCIG00000000170) #20 SRD5A3 (ENSPCIG00000000147) #21 KDR (ENSPCIG00000000073) #22 KIT (ENSPCIG00000006562) PDGFRA (ENSPCIG00000006557) GSX2 (ENSPCIG00000006553) CHIC2 (ENSPCIG00000006550) Wallaby MODERN SPECIES 3435 KDR (ENSMEUG00000014995) #22 Tasmanian devil MODERN SPECIES 5 ENSSHAG00000000263 ENSSHAG00000003724 ENSSHAG00000020703 SRP72 (ENSSHAG00000028812) ENSSHAG00000001748 ENSSHAG00000002861 AASDH (ENSSHAG00000004611) CRACD (ENSSHAG00000026554) CEP135 (ENSSHAG00000008361) EXOC1 (ENSSHAG00000009279) EXOC1L (ENSSHAG00000022445) ENSSHAG00000028318 #17 CLOCK (ENSSHAG00000005555) #18 TMEM165 (ENSSHAG00000006313) #20 SRD5A3 (ENSSHAG00000006811) #21 KDR (ENSSHAG00000008488) #22 ENSSHAG00000010697 PDGFRA (ENSSHAG00000013199) GSX2 (ENSSHAG00000030117) CHIC2 (ENSSHAG00000014044) LNX1 (ENSSHAG00000015394) ENSSHAG00000015789 SCFD2 (ENSSHAG00000030711) ENSSHAG00000030590 ENSSHAG00000027067 USP46 (ENSSHAG00000023109) SPATA18 (ENSSHAG00000017688) SGCB (ENSSHAG00000017739) ENSSHAG00000017778 DCUN1D4 (ENSSHAG00000029803) ENSSHAG00000018132 Platypus MODERN SPECIES 3 SGCZ (ENSOANG00000037581) DLC1 (ENSOANG00000040351) ENSOANG00000002169 LONRF1 (ENSOANG00000003079) ENSOANG00000036209 PPAT (ENSOANG00000007832) ENSOANG00000007833 ENSOANG00000007831 ENSOANG00000042649 CEP135 (ENSOANG00000012930) EXOC1 (ENSOANG00000013188) EXOC1L (ENSOANG00000045276) PDCL2 (ENSOANG00000001491) #17 CLOCK (ENSOANG00000003801) #18 ENSOANG00000050775 #20 KDR (ENSOANG00000003802) #22 KIT (ENSOANG00000003803) PDGFRA (ENSOANG00000003786) GSX2 (ENSOANG00000037707) CHIC2 (ENSOANG00000043792) LNX1 (ENSOANG00000037540) ENSOANG00000003384 ENSOANG00000013104 RASL11B (ENSOANG00000014749) USP46 (ENSOANG00000008879) ENSOANG00000049623 SGCB (ENSOANG00000000625) ENSOANG00000038424 DCUN1D4 (ENSOANG00000005193) ENSOANG00000008881 ZAR1 (ENSOANG00000031130) Sauria ANCESTRAL SPECIES 6 ENSGT00940000164461 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00960000189468 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Archelosauria ANCESTRAL SPECIES 4 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00960000189468 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Archosauria ANCESTRAL SPECIES 1 ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00960000189468 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Aves ANCESTRAL SPECIES 3 ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Neognathae ANCESTRAL SPECIES 5 ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Neognathae_b ANCESTRAL SPECIES 4 ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Neognathae_c ANCESTRAL SPECIES 3 ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.a Kakapo MODERN SPECIES 24 TRMT9B (ENSSHBG00005010398) LONRF1 (ENSSHBG00005010302) PAICS (ENSSHBG00005010248) ENSSHBG00005010211 PPAT (ENSSHBG00005000696) AASDH (ENSSHBG00005020333) CRACD (ENSSHBG00005020330) CEP135 (ENSSHBG00005020320) EXOC1 (ENSSHBG00005020312) EXOC1L (ENSSHBG00005020307) NMU (ENSSHBG00005020302) #16 PDCL2 (ENSSHBG00005020298) #17 CLOCK (ENSSHBG00005020186) #18 TMEM165 (ENSSHBG00005020176) #20 SRD5A3 (ENSSHBG00005020172) #21 KDR (ENSSHBG00005020156) #22 KIT (ENSSHBG00005020143) PDGFRA (ENSSHBG00005020132) GSX2 (ENSSHBG00005020130) CHIC2 (ENSSHBG00005020128) LNX1 (ENSSHBG00005020124) ENSSHBG00005020119 SCFD2 (ENSSHBG00005020115) RASL11B (ENSSHBG00005020112) USP46 (ENSSHBG00005020110) SPATA18 (ENSSHBG00005020104) SGCB (ENSSHBG00005020099) ENSSHBG00005020096 DCUN1D4 (ENSSHBG00005020092) CWH43 (ENSSHBG00005020070) OCIAD1 (ENSSHBG00005020061) Golden eagle MODERN SPECIES LONRF1 (ENSACCG00020007784) PAICS (ENSACCG00020007757) PPAT (ENSACCG00020007719) AASDH (ENSACCG00020007697) CRACD (ENSACCG00020007672) ENSACCG00020007662 ENSACCG00020007653 CEP135 (ENSACCG00020007631) EXOC1 (ENSACCG00020007552) EXOC1L (ENSACCG00020007510) NMU (ENSACCG00020007478) #16 PDCL2 (ENSACCG00020007452) #17 CLOCK (ENSACCG00020007430) #18 TMEM165 (ENSACCG00020007408) #20 SRD5A3 (ENSACCG00020007395) #21 KDR (ENSACCG00020007140) #22 KIT (ENSACCG00020006083) PDGFRA (ENSACCG00020005165) GSX2 (ENSACCG00020005150) CHIC2 (ENSACCG00020005138) LNX1 (ENSACCG00020005123) ENSACCG00020004413 SCFD2 (ENSACCG00020004393) RASL11B (ENSACCG00020004386) USP46 (ENSACCG00020004360) SPATA18 (ENSACCG00020004327) SGCB (ENSACCG00020004304) LRRC66 (ENSACCG00020004290) DCUN1D4 (ENSACCG00020004264) CWH43 (ENSACCG00020004233) ENSACCG00020004209 Passeriformes ANCESTRAL SPECIES 4 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Great tit MODERN SPECIES 23 SGCZ (ENSPMJG00000006105) DLC1 (ENSPMJG00000006141) TRMT9B (ENSPMJG00000006145) LONRF1 (ENSPMJG00000006150) PAICS (ENSPMJG00000006152) PPAT (ENSPMJG00000006159) AASDH (ENSPMJG00000006191) CRACD (ENSPMJG00000006238) CEP135 (ENSPMJG00000006246) EXOC1 (ENSPMJG00000006273) EXOC1L (ENSPMJG00000006303) NMU (ENSPMJG00000006306) #16 CLOCK (ENSPMJG00000006320) #18 TMEM165 (ENSPMJG00000006327) #20 SRD5A3 (ENSPMJG00000006341) #21 KDR (ENSPMJG00000006347) #22 KIT (ENSPMJG00000006372) PDGFRA (ENSPMJG00000006373) GSX2 (ENSPMJG00000006384) CHIC2 (ENSPMJG00000006388) LNX1 (ENSPMJG00000006412) ENSPMJG00000006423 SCFD2 (ENSPMJG00000006448) RASL11B (ENSPMJG00000006450) USP46 (ENSPMJG00000006453) ENSPMJG00000006558 SGCB (ENSPMJG00000006559) ENSPMJG00000006565 DCUN1D4 (ENSPMJG00000006567) CWH43 (ENSPMJG00000006578) ENSPMJG00000006591 Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757.d ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Flycatcher MODERN SPECIES 22 DLC1 (ENSFALG00000003714) TRMT9B (ENSFALG00000003704) LONRF1 (ENSFALG00000003699) PAICS (ENSFALG00000003697) PPAT (ENSFALG00000026323) ENSFALG00000003696 AASDH (ENSFALG00000026187) CRACD (ENSFALG00000025624) CEP135 (ENSFALG00000003667) EXOC1 (ENSFALG00000003663) EXOC1L (ENSFALG00000003662) NMU (ENSFALG00000003659) #16 CLOCK (ENSFALG00000003646) #18 TMEM165 (ENSFALG00000003636) #20 SRD5A3 (ENSFALG00000003630) #21 KDR (ENSFALG00000003572) #22 KIT (ENSFALG00000003481) PDGFRA (ENSFALG00000003428) GSX2 (ENSFALG00000026716) CHIC2 (ENSFALG00000010780) LNX1 (ENSFALG00000003386) ENSFALG00000003360 SCFD2 (ENSFALG00000003345) RASL11B (ENSFALG00000028359) USP46 (ENSFALG00000003314) ENSFALG00000003298 SGCB (ENSFALG00000003287) DCUN1D4 (ENSFALG00000003259) ENSFALG00000028702 CWH43 (ENSFALG00000003237) OCIAD1 (ENSFALG00000027572) Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757.d ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Passeroidea ANCESTRAL SPECIES 4 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757.d ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Zebra finch MODERN SPECIES 25 SGCZ (ENSTGUG00000019804) DLC1 (ENSTGUG00000007345) TRMT9B (ENSTGUG00000007372) LONRF1 (ENSTGUG00000007379) PAICS (ENSTGUG00000007393) PPAT (ENSTGUG00000007413) AASDH (ENSTGUG00000007433) CRACD (ENSTGUG00000019732) CEP135 (ENSTGUG00000007448) EXOC1 (ENSTGUG00000007460) EXOC1L (ENSTGUG00000025689) NMU (ENSTGUG00000007492) #16 CLOCK (ENSTGUG00000007513) #18 TMEM165 (ENSTGUG00000007546) #20 SRD5A3 (ENSTGUG00000007555) #21 KDR (ENSTGUG00000007557) #22 KIT (ENSTGUG00000007686) PDGFRA (ENSTGUG00000007756) GSX2 (ENSTGUG00000007803) CHIC2 (ENSTGUG00000026458) LNX1 (ENSTGUG00000007807) ENSTGUG00000007834 SCFD2 (ENSTGUG00000007847) RASL11B (ENSTGUG00000027603) USP46 (ENSTGUG00000023387) ENSTGUG00000022606 SGCB (ENSTGUG00000007902) ENSTGUG00000007920 DCUN1D4 (ENSTGUG00000025443) CWH43 (ENSTGUG00000007956) OCIAD1 (ENSTGUG00000007973) Common canary MODERN SPECIES 2 TRMT9B (ENSSCAG00000009020) ENSSCAG00000009017 LONRF1 (ENSSCAG00000009003) PAICS (ENSSCAG00000008998) ENSSCAG00000008986 PPAT (ENSSCAG00000008980) AASDH (ENSSCAG00000008974) CRACD (ENSSCAG00000008953) CEP135 (ENSSCAG00000008924) EXOC1 (ENSSCAG00000008908) EXOC1L (ENSSCAG00000008899) NMU (ENSSCAG00000008883) #16 CLOCK (ENSSCAG00000008858) #18 TMEM165 (ENSSCAG00000008854) #20 SRD5A3 (ENSSCAG00000008851) #21 KDR (ENSSCAG00000008843) #22 KIT (ENSSCAG00000008259) PDGFRA (ENSSCAG00000008151) GSX2 (ENSSCAG00000008146) CHIC2 (ENSSCAG00000008137) LNX1 (ENSSCAG00000008067) ENSSCAG00000008059 SCFD2 (ENSSCAG00000007948) RASL11B (ENSSCAG00000007937) USP46 (ENSSCAG00000007932) ENSSCAG00000007920 ENSSCAG00000007917 SGCB (ENSSCAG00000007916) ENSSCAG00000007913 DCUN1D4 (ENSSCAG00000007905) CWH43 (ENSSCAG00000007896) Medium ground finch MODERN SPECIES DLC1 (ENSGFOG00000006748) TRMT9B (ENSGFOG00000006740) LONRF1 (ENSGFOG00000006728) PAICS (ENSGFOG00000006715) ENSGFOG00000006711 PPAT (ENSGFOG00000006686) AASDH (ENSGFOG00000006676) CRACD (ENSGFOG00000006669) CEP135 (ENSGFOG00000006648) EXOC1 (ENSGFOG00000006621) EXOC1L (ENSGFOG00000006612) NMU (ENSGFOG00000006606) #16 CLOCK (ENSGFOG00000005683) #18 TMEM165 (ENSGFOG00000005644) #20 SRD5A3 (ENSGFOG00000005638) #21 KDR (ENSGFOG00000005623) #22 KIT (ENSGFOG00000005600) PDGFRA (ENSGFOG00000005584) GSX2 (ENSGFOG00000005577) CHIC2 (ENSGFOG00000005570) ENSGFOG00000005563 ENSGFOG00000005531 ENSGFOG00000005511 ENSGFOG00000005500 SCFD2 (ENSGFOG00000005487) RASL11B (ENSGFOG00000005477) USP46 (ENSGFOG00000005447) ENSGFOG00000005412 SGCB (ENSGFOG00000005393) LRRC66 (ENSGFOG00000005375) DCUN1D4 (ENSGFOG00000005349) Galloanserae ANCESTRAL SPECIES 5 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Anatidae ANCESTRAL SPECIES 2 ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Pink-footed goose MODERN SPECIES 136 ENSABRG00000009220 PAICS (ENSABRG00000009227) PPAT (ENSABRG00000009291) ENSABRG00000009541 ENSABRG00000009547 AASDH (ENSABRG00000009577) CRACD (ENSABRG00000009946) CEP135 (ENSABRG00000010107) EXOC1 (ENSABRG00000010551) EXOC1L (ENSABRG00000000099) NMU (ENSABRG00000000102) #16 PDCL2 (ENSABRG00000000105) #17 CLOCK (ENSABRG00000000118) #18 TMEM165 (ENSABRG00000000125) #20 SRD5A3 (ENSABRG00000000126) #21 KDR (ENSABRG00000000127) #22 KIT (ENSABRG00000000133) PDGFRA (ENSABRG00000000161) GSX2 (ENSABRG00000000176) CHIC2 (ENSABRG00000000179) LNX1 (ENSABRG00000000220) ENSABRG00000000319 SCFD2 (ENSABRG00000000436) RASL11B (ENSABRG00000000460) USP46 (ENSABRG00000000494) SPATA18 (ENSABRG00000000526) SGCB (ENSABRG00000000639) ENSABRG00000000649 DCUN1D4 (ENSABRG00000000663) CWH43 (ENSABRG00000001332) ENSABRG00000001608 Duck MODERN SPECIES 22 DLC1 (ENSAPLG00000009900) TRMT9B (ENSAPLG00000009756) LONRF1 (ENSAPLG00000009735) PAICS (ENSAPLG00000009439) PPAT (ENSAPLG00000009106) AASDH (ENSAPLG00000008927) CRACD (ENSAPLG00000017006) CEP135 (ENSAPLG00000008577) EXOC1 (ENSAPLG00000007799) EXOC1L (ENSAPLG00000022105) NMU (ENSAPLG00000007751) #16 PDCL2 (ENSAPLG00000007653) #17 CLOCK (ENSAPLG00000007176) #18 TMEM165 (ENSAPLG00000024898) #20 SRD5A3 (ENSAPLG00000007156) #21 KDR (ENSAPLG00000005535) #22 KIT (ENSAPLG00000004054) PDGFRA (ENSAPLG00000003497) CHIC2 (ENSAPLG00000022741) LNX1 (ENSAPLG00000003420) ENSAPLG00000003042 SCFD2 (ENSAPLG00000022972) RASL11B (ENSAPLG00000002875) USP46 (ENSAPLG00000003005) SPATA18 (ENSAPLG00000003130) SGCB (ENSAPLG00000003393) ENSAPLG00000024904 DCUN1D4 (ENSAPLG00000003414) CWH43 (ENSAPLG00000003773) OCIAD2 (ENSAPLG00000026944) OCIAD1 (ENSAPLG00000027836) Phasianidae ANCESTRAL SPECIES 2 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165267 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935.d ENSGT00510000048509 ENSGT00530000063690.a.b.a.a Phasianidae_b ANCESTRAL SPECIES 4 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935.d ENSGT00510000048509 ENSGT00530000063690.a.b.a.a Chicken MODERN SPECIES 33 DLC1 (ENSGALG00010014171) KIAA1456 (ENSGALG00010014740) LONRF1 (ENSGALG00010014750) PAICS (ENSGALG00010014847) PPAT (ENSGALG00010014883) AASDH (ENSGALG00010014902) CRACD (ENSGALG00010015024) CEP135 (ENSGALG00010015083) EXOC1 (ENSGALG00010015143) EXOC1L (ENSGALG00010015170) NMU (ENSGALG00010013308) #16 PDCL2 (ENSGALG00010013321) #17 CLOCK (ENSGALG00010015364) #18 TMEM165 (ENSGALG00010015392) #20 SRD5A3 (ENSGALG00010015397) #21 KDR (ENSGALG00010013498) #22 KIT (ENSGALG00010013314) PDGFRA (ENSGALG00010013621) GSX2 (ENSGALG00010014115) CHIC2 (ENSGALG00010014091) LNX1 (ENSGALG00010014199) ENSGALG00010014249 SCFD2 (ENSGALG00010014267) RASL11B (ENSGALG00010013556) USP46 (ENSGALG00010016451) SPATA18 (ENSGALG00010016507) SGCB (ENSGALG00010016547) ENSGALG00010016552 DCUN1D4 (ENSGALG00010016560) CWH43 (ENSGALG00010016575) FRYL (ENSGALG00010016597) Japanese quail MODERN SPECIES 22 PPAT (ENSCJPG00005010591) ENSCJPG00005010634 ENSCJPG00005010635 ENSCJPG00005010636 AASDH (ENSCJPG00005010637) ENSCJPG00005010638 ENSCJPG00005010639 CEP135 (ENSCJPG00005010640) EXOC1 (ENSCJPG00005010673) EXOC1L (ENSCJPG00005010674) NMU (ENSCJPG00005010675) #16 PDCL2 (ENSCJPG00005010676) #17 CLOCK (ENSCJPG00005010677) #18 ENSCJPG00005010678 #20 SRD5A3 (ENSCJPG00005010679) #21 KDR (ENSCJPG00005010680) #22 KIT (ENSCJPG00005010681) PDGFRA (ENSCJPG00005010682) GSX2 (ENSCJPG00005010684) CHIC2 (ENSCJPG00005010699) LNX1 (ENSCJPG00005010702) ENSCJPG00005010703 SCFD2 (ENSCJPG00005010704) RASL11B (ENSCJPG00005010705) USP46 (ENSCJPG00005010708) SPATA18 (ENSCJPG00005010710) SGCB (ENSCJPG00005010711) ENSCJPG00005010712 DCUN1D4 (ENSCJPG00005010713) ENSCJPG00005010722 OCIAD1 (ENSCJPG00005010723) African ostrich MODERN SPECIES 309 ENSSCUG00000001928 PAICS (ENSSCUG00000001924) ENSSCUG00000001921 PPAT (ENSSCUG00000001917) AASDH (ENSSCUG00000001913) CRACD (ENSSCUG00000001911) CEP135 (ENSSCUG00000001907) EXOC1 (ENSSCUG00000001885) EXOC1L (ENSSCUG00000001850) NMU (ENSSCUG00000001845) #16 PDCL2 (ENSSCUG00000001843) #17 CLOCK (ENSSCUG00000001838) #18 TMEM165 (ENSSCUG00000001832) #20 SRD5A3 (ENSSCUG00000001825) #21 KDR (ENSSCUG00000001805) #22 Australian saltwater crocodile MODERN SPECIES 65 ENSCPRG00005010633 DLC1 (ENSCPRG00005010616) TRMT9B (ENSCPRG00005010615) LONRF1 (ENSCPRG00005010581) PAICS (ENSCPRG00005010534) PPAT (ENSCPRG00005010520) AASDH (ENSCPRG00005010515) CRACD (ENSCPRG00005010513) CEP135 (ENSCPRG00005010459) EXOC1 (ENSCPRG00005010449) EXOC1L (ENSCPRG00005010433) PDCL2 (ENSCPRG00005010416) #17 CLOCK (ENSCPRG00005010407) #18 TMEM165 (ENSCPRG00005010401) #20 SRD5A3 (ENSCPRG00005010389) #21 KDR (ENSCPRG00005010347) #22 ENSCPRG00005010332 ENSCPRG00005010319 PDGFRA (ENSCPRG00005010310) GSX2 (ENSCPRG00005010302) CHIC2 (ENSCPRG00005010298) ENSCPRG00005010286 ENSCPRG00005010259 ENSCPRG00005010130 SCFD2 (ENSCPRG00005010093) RASL11B (ENSCPRG00005010044) USP46 (ENSCPRG00005010022) ENSCPRG00005009994 ENSCPRG00005009991 SGCB (ENSCPRG00005009985) ENSCPRG00005009969 Cryptodira ANCESTRAL SPECIES 2 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00510000048509 Testudinoidea ANCESTRAL SPECIES 10 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935.b.b ENSGT00510000048509 Emydidae ANCESTRAL SPECIES 1 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935.b.b ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Three-toed box turtle MODERN SPECIES 26 LONRF1 (ENSTMTG00000007807) PAICS (ENSTMTG00000007835) PPAT (ENSTMTG00000007851) ENSTMTG00000007870 AASDH (ENSTMTG00000007880) CRACD (ENSTMTG00000007928) ENSTMTG00000008011 CEP135 (ENSTMTG00000008051) EXOC1 (ENSTMTG00000008355) EXOC1L (ENSTMTG00000008418) NMU (ENSTMTG00000008447) #16 PDCL2 (ENSTMTG00000008497) #17 CLOCK (ENSTMTG00000008692) #18 TMEM165 (ENSTMTG00000011410) #20 SRD5A3 (ENSTMTG00000011424) #21 KDR (ENSTMTG00000011437) #22 KIT (ENSTMTG00000011486) PDGFRA (ENSTMTG00000011677) GSX2 (ENSTMTG00000012553) CHIC2 (ENSTMTG00000012565) LNX1 (ENSTMTG00000012657) FIP1L1 (ENSTMTG00000013399) SCFD2 (ENSTMTG00000013449) RASL11B (ENSTMTG00000013476) ENSTMTG00000013485 USP46 (ENSTMTG00000013510) ENSTMTG00000013524 ENSTMTG00000013545 SGCB (ENSTMTG00000013568) LRRC66 (ENSTMTG00000013578) DCUN1D4 (ENSTMTG00000013593) painted turtle MODERN SPECIES 13 TRMT9B (ENSCPBG00000025129) LONRF1 (ENSCPBG00000025127) PAICS (ENSCPBG00000025123) ENSCPBG00000025122 PPAT (ENSCPBG00000025119) AASDH (ENSCPBG00000025116) CRACD (ENSCPBG00000025111) CEP135 (ENSCPBG00000025094) EXOC1 (ENSCPBG00000025085) EXOC1L (ENSCPBG00000025084) NMU (ENSCPBG00000025079) #16 PDCL2 (ENSCPBG00000025075) #17 CLOCK (ENSCPBG00000025068) #18 TMEM165 (ENSCPBG00000025063) #20 SRD5A3 (ENSCPBG00000025061) #21 KDR (ENSCPBG00000025051) #22 KIT (ENSCPBG00000025043) PDGFRA (ENSCPBG00000025039) GSX2 (ENSCPBG00000025035) CHIC2 (ENSCPBG00000025032) ENSCPBG00000025030 ENSCPBG00000025027 ENSCPBG00000025024 ENSCPBG00000025019 SCFD2 (ENSCPBG00000025016) RASL11B (ENSCPBG00000025014) ENSCPBG00000025012 USP46 (ENSCPBG00000025005) SPATA18 (ENSCPBG00000025002) SGCB (ENSCPBG00000024999) DCUN1D4 (ENSCPBG00000024995) Testudinidae ANCESTRAL SPECIES 11 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00940000156935.b.b ENSGT00510000048509 ENSGT00530000063690.a.b.a.b Abingdon island giant tortoise MODERN SPECIES 875 CLOCK (ENSCABG00000012230) #18 TMEM165 (ENSCABG00000012229) #20 SRD5A3 (ENSCABG00000012207) #21 KDR (ENSCABG00000012205) #22 ENSCABG00000012204 Goode s thornscrub tortoise MODERN SPECIES 19 TRMT9B (ENSGEVG00005000375) ENSGEVG00005000352 ENSGEVG00005000329 PAICS (ENSGEVG00005000309) PPAT (ENSGEVG00005000268) ENSGEVG00005000235 CRACD (ENSGEVG00005000192) CEP135 (ENSGEVG00005019447) EXOC1 (ENSGEVG00005019416) EXOC1L (ENSGEVG00005019396) NMU (ENSGEVG00005019385) #16 PDCL2 (ENSGEVG00005019354) #17 CLOCK (ENSGEVG00005019116) #18 TMEM165 (ENSGEVG00005019024) #20 SRD5A3 (ENSGEVG00005019011) #21 KDR (ENSGEVG00005018879) #22 ENSGEVG00005018831 KIT (ENSGEVG00005015429) PDGFRA (ENSGEVG00005014354) GSX2 (ENSGEVG00005014314) CHIC2 (ENSGEVG00005014301) LNX1 (ENSGEVG00005013644) ENSGEVG00005013350 SCFD2 (ENSGEVG00005013200) RASL11B (ENSGEVG00005013148) USP46 (ENSGEVG00005013092) ENSGEVG00005012992 ENSGEVG00005012945 SGCB (ENSGEVG00005012678) DCUN1D4 (ENSGEVG00005012584) CWH43 (ENSGEVG00005012465) Chinese turtle MODERN SPECIES 318 TRMT9B (ENSPSIG00000000804) ENSPSIG00000000797 PPAT (ENSPSIG00000013312) ENSPSIG00000013309 PAICS (ENSPSIG00000013075) LONRF1 (ENSPSIG00000012737) CRACD (ENSPSIG00000012493) CEP135 (ENSPSIG00000012175) EXOC1 (ENSPSIG00000012020) EXOC1L (ENSPSIG00000011969) NMU (ENSPSIG00000011963) #16 PDCL2 (ENSPSIG00000011901) #17 CLOCK (ENSPSIG00000011404) #18 TMEM165 (ENSPSIG00000011384) #20 SRD5A3 (ENSPSIG00000011381) #21 KDR (ENSPSIG00000009378) #22 ENSPSIG00000000785 KIT (ENSPSIG00000008233) PDGFRA (ENSPSIG00000006648) GSX2 (ENSPSIG00000006477) CHIC2 (ENSPSIG00000006349) LNX1 (ENSPSIG00000005862) ENSPSIG00000005407 ENSPSIG00000005201 ENSPSIG00000005150 RASL11B (ENSPSIG00000005031) USP46 (ENSPSIG00000017105) SPATA18 (ENSPSIG00000016758) SGCB (ENSPSIG00000016727) DCUN1D4 (ENSPSIG00000016618) CWH43 (ENSPSIG00000016496) Lepidosauria ANCESTRAL SPECIES 9 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.q ENSGT00960000189468 ENSGT00390000013532.r ENSGT00390000008110 ENSGT00940000156935 ENSGT00510000048509 Episquamata ANCESTRAL SPECIES 3 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.q ENSGT00960000189468 ENSGT00390000013532.r ENSGT00390000008110 ENSGT00940000156935 ENSGT00510000048509 Laterata ANCESTRAL SPECIES 21 ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT01080000257472 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.q ENSGT00390000008110 ENSGT00940000156935 ENSGT00510000048509 ENSGT00530000063690.a.b.a.b ENSGT00530000063690.a.b.a.a Common wall lizard MODERN SPECIES 17 CRACD (ENSPMRG00000012749) ENSPMRG00000012764 ENSPMRG00000012766 CEP135 (ENSPMRG00000012773) EXOC1 (ENSPMRG00000012793) EXOC1L (ENSPMRG00000012809) NMU (ENSPMRG00000012814) #16 PDCL2 (ENSPMRG00000012824) #17 ENSPMRG00000012827 CLOCK (ENSPMRG00000012832) #18 ENSPMRG00000012839 TMEM165 (ENSPMRG00000012842) #20 SRD5A3 (ENSPMRG00000012845) #21 ENSPMRG00000012848 ENSPMRG00000012849 KDR (ENSPMRG00000012909) #22 KIT (ENSPMRG00000013448) PDGFRA (ENSPMRG00000013463) GSX2 (ENSPMRG00000013473) ENSPMRG00000013476 CHIC2 (ENSPMRG00000013482) LNX1 (ENSPMRG00000008993) ENSPMRG00000009032 SCFD2 (ENSPMRG00000009112) RASL11B (ENSPMRG00000009126) USP46 (ENSPMRG00000009137) SPATA18 (ENSPMRG00000009153) ENSPMRG00000009171 ENSPMRG00000009179 ENSPMRG00000009186 ENSPMRG00000009197 Argentine black and white tegu MODERN SPECIES 1 ENSSMRG00000009359 DLC1 (ENSSMRG00000009326) TRMT9B (ENSSMRG00000009277) LONRF1 (ENSSMRG00000009275) PAICS (ENSSMRG00000009266) PPAT (ENSSMRG00000009264) AASDH (ENSSMRG00000009209) CRACD (ENSSMRG00000009208) CEP135 (ENSSMRG00000009200) EXOC1 (ENSSMRG00000005264) EXOC1L (ENSSMRG00000005244) PDCL2 (ENSSMRG00000005218) #17 CLOCK (ENSSMRG00000005209) #18 TMEM165 (ENSSMRG00000005187) #20 SRD5A3 (ENSSMRG00000005180) #21 KDR (ENSSMRG00000005164) #22 KIT (ENSSMRG00000005119) PDGFRA (ENSSMRG00000005069) GSX2 (ENSSMRG00000005064) CHIC2 (ENSSMRG00000005056) LNX1 (ENSSMRG00000005012) FIP1L1 (ENSSMRG00000004969) SCFD2 (ENSSMRG00000004955) RASL11B (ENSSMRG00000004911) USP46 (ENSSMRG00000004888) SPATA18 (ENSSMRG00000004846) SGCB (ENSSMRG00000004829) DCUN1D4 (ENSSMRG00000004820) OCIAD1 (ENSSMRG00000004814) ENSSMRG00000004807 FRYL (ENSSMRG00000004609) Toxicofera ANCESTRAL SPECIES 21 ENSGT00440000033329.a.a.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00960000187690 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532.q ENSGT00960000189468 ENSGT00390000013532.r ENSGT00390000008110 ENSGT00940000156935 ENSGT00510000048509 Elapidae ANCESTRAL SPECIES 22 ENSGT00940000157456 ENSGT00940000157949 ENSGT00940000156247 ENSGT00940000159709 ENSGT00390000013778 ENSGT00940000153648.b ENSGT00940000153404.b ENSGT00940000160197 ENSGT00940000157221.r ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000177623 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT01060000251732 ENSGT00390000013532.q ENSGT00960000189468 ENSGT00390000013532.r ENSGT00390000008110 ENSGT00940000156935 Indian cobra MODERN SPECIES 3 TBC1D1 (ENSNNAG00000005416) PGM2 (ENSNNAG00000007219) RELL1 (ENSNNAG00000007248) NWD2 (ENSNNAG00000007268) DTHD1 (ENSNNAG00000007301) ENSNNAG00000007348 ENSNNAG00000007360 PCDH7 (ENSNNAG00000007378) ENSNNAG00000007402 ENSNNAG00000007417 STIM2 (ENSNNAG00000007431) TBC1D19 (ENSNNAG00000007498) CCKAR (ENSNNAG00000007585) RBPJ (ENSNNAG00000007657) ENSNNAG00000007785 KDR (ENSNNAG00000007823) #22 KIT (ENSNNAG00000008242) PDGFRA (ENSNNAG00000010974) GSX2 (ENSNNAG00000014028) CHIC2 (ENSNNAG00000014042) LNX1 (ENSNNAG00000014069) ENSNNAG00000014116 SCFD2 (ENSNNAG00000014166) RASL11B (ENSNNAG00000014208) ENSNNAG00000014225 USP46 (ENSNNAG00000014235) ENSNNAG00000014256 ENSNNAG00000014270 ENSNNAG00000014290 SGCB (ENSNNAG00000014302) DCUN1D4 (ENSNNAG00000014313) Elapidae_a ANCESTRAL SPECIES 25 ENSGT00940000157456 ENSGT00940000157949 ENSGT00940000156247.r ENSGT00940000159709 ENSGT00390000013778 ENSGT00940000153648.b ENSGT00940000153404.b ENSGT00940000160197 ENSGT00940000157221.r ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000177623 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192.e ENSGT00940000158643 ENSGT00940000153284.b ENSGT01060000251732 ENSGT00390000013532.q ENSGT00960000189468 ENSGT00390000013532.r ENSGT00390000008110 ENSGT00940000156935 Acanthophiinae ANCESTRAL SPECIES 4 ENSGT00940000157456 ENSGT00940000157949 ENSGT00940000156247.r ENSGT00940000159709 ENSGT00390000013778 ENSGT00940000153648.b ENSGT00940000153404.b ENSGT00940000160197 ENSGT00940000157221.r ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000177623 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192.e ENSGT00940000158643 ENSGT00940000153284.b ENSGT01060000251732 ENSGT00390000013532.q ENSGT00960000189468 ENSGT00390000013532.r ENSGT00390000008110 ENSGT00940000156935 Eastern brown snake MODERN SPECIES 12 TLR6 (ENSPTXG00000003138) KLF3 (ENSPTXG00000003142) TBC1D1 (ENSPTXG00000003167) PGM2 (ENSPTXG00000004690) RELL1 (ENSPTXG00000004695) ENSPTXG00000004697 NWD2 (ENSPTXG00000004699) DTHD1 (ENSPTXG00000004701) ARAP2 (ENSPTXG00000004702) PCDH7 (ENSPTXG00000004704) STIM2 (ENSPTXG00000004705) TBC1D19 (ENSPTXG00000004706) CCKAR (ENSPTXG00000004707) RBPJ (ENSPTXG00000004716) ENSPTXG00000004718 KDR (ENSPTXG00000004719) #22 KIT (ENSPTXG00000004726) PDGFRA (ENSPTXG00000005108) GSX2 (ENSPTXG00000005284) CHIC2 (ENSPTXG00000005285) LNX1 (ENSPTXG00000005286) ENSPTXG00000005905 SCFD2 (ENSPTXG00000005906) RASL11B (ENSPTXG00000005909) USP46 (ENSPTXG00000005910) ENSPTXG00000005911 ENSPTXG00000005912 SGCB (ENSPTXG00000005913) DCUN1D4 (ENSPTXG00000005914) ENSPTXG00000005915 FRYL (ENSPTXG00000005918) Mainland tiger snake MODERN SPECIES 209 KDR (ENSNSUG00000018223) #22 ENSNSUG00000018224 ENSNSUG00000018225 ENSNSUG00000018226 PDGFRA (ENSNSUG00000018227) GSX2 (ENSNSUG00000018228) CHIC2 (ENSNSUG00000018229) ENSNSUG00000018230 LNX1 (ENSNSUG00000018231) ENSNSUG00000018332 ENSNSUG00000018333 ENSNSUG00000018335 RASL11B (ENSNSUG00000018336) Blue-lipped sea krait MODERN SPECIES 3789 KDR (ENSLLTG00000004121) #22 Lizard MODERN SPECIES 4 LONRF1 (ENSACAG00000008845) PAICS (ENSACAG00000008896) ENSACAG00000026642 PPAT (ENSACAG00000040764) AASDH (ENSACAG00000009095) CRACD (ENSACAG00000035313) CEP135 (ENSACAG00000009137) EXOC1 (ENSACAG00000009187) EXOC1L (ENSACAG00000025128) NMU (ENSACAG00000028735) #16 PDCL2 (ENSACAG00000009315) #17 CLOCK (ENSACAG00000009335) #18 TMEM165 (ENSACAG00000009581) #20 SRD5A3 (ENSACAG00000009601) #21 ENSACAG00000040284 KDR (ENSACAG00000009614) #22 KIT (ENSACAG00000009902) ENSACAG00000038387 PDGFRA (ENSACAG00000010297) GSX2 (ENSACAG00000010497) ENSACAG00000010501 LNX1 (ENSACAG00000010514) ENSACAG00000010556 GABRA2 (ENSACAG00000006901) GABRG1 (ENSACAG00000007024) ENSACAG00000039867 GNPDA2 (ENSACAG00000007035) GUF1 (ENSACAG00000007056) YIPF7 (ENSACAG00000007084) KCTD8 (ENSACAG00000007098) ENSACAG00000036340 tuatara DUPLICATION tuatara MODERN SPECIES 803 ENSSPUG00000012518 ENSSPUG00000012524 #22 THAP11 (ENSSPUG00000012536) ENSSPUG00000012546 CDX4 (ENSSPUG00000012560) CHIC1 (ENSSPUG00000012570) ENSSPUG00000012581 ENSSPUG00000012598 ENSSPUG00000012614 ENSSPUG00000012623 ENSSPUG00000012629 SLC16A2 (ENSSPUG00000012644) ENSSPUG00000012659 RLIM (ENSSPUG00000012671) NEXMIF (ENSSPUG00000012700) ABCB7 (ENSSPUG00000012862) UPRT (ENSSPUG00000013482) tuatara MODERN SPECIES 1623 LONRF1 (ENSSPUG00000000056) PAICS (ENSSPUG00000018939) ENSSPUG00000018936 PPAT (ENSSPUG00000018929) ENSSPUG00000018905 AASDH (ENSSPUG00000018897) CRACD (ENSSPUG00000018861) CEP135 (ENSSPUG00000018843) EXOC1 (ENSSPUG00000018121) EXOC1L (ENSSPUG00000017699) NMU (ENSSPUG00000017691) #16 PDCL2 (ENSSPUG00000017678) #17 CLOCK (ENSSPUG00000017590) #18 TMEM165 (ENSSPUG00000017530) #20 SRD5A3 (ENSSPUG00000017507) #21 KDR (ENSSPUG00000017456) #22 KIT (ENSSPUG00000017400) PDGFRA (ENSSPUG00000017372) CHIC2 (ENSSPUG00000017351) LNX1 (ENSSPUG00000017340) ENSSPUG00000017328 ENSSPUG00000017321 ENSSPUG00000017312 ENSSPUG00000017303 RASL11B (ENSSPUG00000017298) USP46 (ENSSPUG00000017280) SPATA18 (ENSSPUG00000017244) SGCB (ENSSPUG00000017221) DCUN1D4 (ENSSPUG00000017210) CWH43 (ENSSPUG00000017192) ENSSPUG00000017180 Anura ANCESTRAL SPECIES 2 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00390000003428 ENSGT00390000010172 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000159453 ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00530000063690.a.b.b ENSGT00610000086058.a Frog MODERN SPECIES ENSXETG00000044105 cdpf1 (ENSXETG00000005620) krt55 (ENSXETG00000005618) paics.1 (ENSXETG00000005615) aasdh (ENSXETG00000005614) cracd (ENSXETG00000021084) cep135 (ENSXETG00000021069) exoc1 (ENSXETG00000021068) exoc1l (ENSXETG00000034396) ENSXETG00000046232 nmu (ENSXETG00000046372) #16 clock (ENSXETG00000021064) #18 ENSXETG00000045417 tmem165 (ENSXETG00000048746) #20 srd5a3 (ENSXETG00000021063) #21 kdr (ENSXETG00000021061) #22 kit (ENSXETG00000021049) ENSXETG00000047975 ENSXETG00000048091 ENSXETG00000047744 znf84 (ENSXETG00000021035) gsx2 (ENSXETG00000021030) chic2 (ENSXETG00000011681) lnx1 (ENSXETG00000011680) fip1l1 (ENSXETG00000011679) ENSXETG00000041706 scfd2 (ENSXETG00000011678) rasl11b (ENSXETG00000011677) sgcb (ENSXETG00000011676) ENSXETG00000044544 ociad2 (ENSXETG00000011674) Leishan spiny toad MODERN SPECIES CRACD (ENSLLEG00000003557) ENSLLEG00000003572 ENSLLEG00000003615 ENSLLEG00000003675 GLOD5 (ENSLLEG00000003687) EXOC1 (ENSLLEG00000003709) EXOC1L (ENSLLEG00000003770) NMU (ENSLLEG00000003778) #16 ENSLLEG00000003786 PDCL2 (ENSLLEG00000003792) #17 CLOCK (ENSLLEG00000003837) #18 ENSLLEG00000003857 TMEM165 (ENSLLEG00000003860) #20 ENSLLEG00000003866 SRD5A3 (ENSLLEG00000003870) #21 KDR (ENSLLEG00000003880) #22 KIT (ENSLLEG00000003906) ENSLLEG00000003915 ENSLLEG00000003919 PDGFRA (ENSLLEG00000003923) ENSLLEG00000003933 ENSLLEG00000006143 GSX2 (ENSLLEG00000006169) CHIC2 (ENSLLEG00000006208) LNX1 (ENSLLEG00000006412) ENSLLEG00000006587 SCFD2 (ENSLLEG00000006719) ENSLLEG00000006806 ENSLLEG00000006821 ENSLLEG00000006828 RASL11B (ENSLLEG00000006844) Coelacanth MODERN SPECIES 915 PDCL2 (ENSLACG00000014356) #17 CLOCK (ENSLACG00000013436) #18 TMEM165 (ENSLACG00000013104) #20 SRD5A3 (ENSLACG00000012606) #21 ENSLACG00000011045 KDR (ENSLACG00000009789) #22 KIT (ENSLACG00000003897) Actinopterygii ANCESTRAL SPECIES 21 ENSGT00940000164461 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000159453.o ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000161261 ENSGT00940000163955 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Reedfish DUPLICATION Reedfish MODERN SPECIES 2 CASKIN1 (ENSECRG00000009790) prpsap2 (ENSECRG00000009729) FAM83G (ENSECRG00000009708) SLC5A10 (ENSECRG00000009658) grapb (ENSECRG00000009631) EPN2 (ENSECRG00000009619) b9d1 (ENSECRG00000009604) CACNA1H (ENSECRG00000009453) pigq (ENSECRG00000009374) eef2kmt (ENSECRG00000009360) vps35l (ENSECRG00000009323) ENSECRG00000009308 ENSECRG00000009286 gprc5bb (ENSECRG00000009272) ENSECRG00000009261 ENSECRG00000009216 #22 SLC4A9 (ENSECRG00000009194) zgc:110540 (ENSECRG00000009171) hnrnph1 (ENSECRG00000009154) ENSECRG00000022655 hbegfa (ENSECRG00000022648) pfdn1 (ENSECRG00000022639) zgc:165573 (ENSECRG00000022627) puraa (ENSECRG00000022622) ENSECRG00000022607 FAM193B (ENSECRG00000022596) DDX41 (ENSECRG00000022574) ENSECRG00000022563 atoh1b (ENSECRG00000022558) ENSECRG00000022553 ENSECRG00000022549 Reedfish MODERN SPECIES 13 AASDH (ENSECRG00000011372) TRMT9B (ENSECRG00000011326) DLC1 (ENSECRG00000011284) polr1d (ENSECRG00000011259) ENSECRG00000011242 ENSECRG00000011231 ENSECRG00000011219 SGCZ (ENSECRG00000011213) ENSECRG00000011209 ENSECRG00000011207 tusc3 (ENSECRG00000011197) ENSECRG00000011191 ENSECRG00000011184 intu (ENSECRG00000011168) ino80b (ENSECRG00000011154) kdr (ENSECRG00000011139) #22 KIT (ENSECRG00000011129) pdgfra (ENSECRG00000010949) ENSECRG00000010875 ENSECRG00000010866 gsx2 (ENSECRG00000010859) chic2 (ENSECRG00000010856) ENSECRG00000010851 lnx1 (ENSECRG00000010847) ENSECRG00000010840 SCFD2 (ENSECRG00000010836) ENSECRG00000010830 rasl11b (ENSECRG00000010827) usp46 (ENSECRG00000010805) spata18 (ENSECRG00000010783) sgcb (ENSECRG00000010773) Neopterygii ANCESTRAL SPECIES 2 ENSGT00390000003428 ENSGT00940000177822 ENSGT00390000010172 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000159453.o ENSGT00940000158640 ENSGT00940000162193 ENSGT00510000048726 #16 ENSGT00940000160654 #17 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000163955 ENSGT00940000156043 ENSGT00390000003601.b ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Spotted gar MODERN SPECIES 670 kdr (ENSLOCG00000014177) #22 kitb (ENSLOCG00000014166) pdgfra (ENSLOCG00000014152) ENSLOCG00000014149 gsx2 (ENSLOCG00000014145) chic2 (ENSLOCG00000014142) lnx1 (ENSLOCG00000014140) fip1l1b (ENSLOCG00000014127) scfd2 (ENSLOCG00000014121) rasl11b (ENSLOCG00000014119) usp46 (ENSLOCG00000014113) spata18 (ENSLOCG00000014109) sgcb (ENSLOCG00000014106) dcun1d4 (ENSLOCG00000014103) fryl (ENSLOCG00000014083) zar1 (ENSLOCG00000014077) Osteoglossocephalai ANCESTRAL SPECIES 156 ENSGT00390000003428 ENSGT00980000199199 ENSGT00940000177822 ENSGT00390000010172 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00530000063690.a.a Osteoglossiformes ANCESTRAL SPECIES 175 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00980000199199 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000157580 #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00940000158460.a ENSGT00940000155875 ENSGT00940000157620 ENSGT00940000153441.a.a ENSGT00390000004612 ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b Asian bonytongue MODERN SPECIES 24 ENSSFOG00015016807 paics (ENSSFOG00015016736) ENSSFOG00015030079 ppat (ENSSFOG00015016774) ENSSFOG00015016822 AASDH (ENSSFOG00015016874) cracd (ENSSFOG00015031825) ENSSFOG00015031824 chst14 (ENSSFOG00015017110) cep135 (ENSSFOG00015017131) exoc1 (ENSSFOG00015017222) clocka (ENSSFOG00015017370) #18 tmem165 (ENSSFOG00015017445) #20 kdr (ENSSFOG00015017470) #22 kitb (ENSSFOG00015017500) pdgfra (ENSSFOG00015017537) gsx2 (ENSSFOG00015017622) lnx1 (ENSSFOG00015017637) fip1l1b (ENSSFOG00015017653) scfd2 (ENSSFOG00015032215) usp46 (ENSSFOG00015017679) ENSSFOG00015019906 NEK1 (ENSSFOG00015028419) sh3rf1 (ENSSFOG00015017718) cbr4 (ENSSFOG00015017754) PALLD (ENSSFOG00015017783) anapc4 (ENSSFOG00015017880) slain2 (ENSSFOG00015026091) SLC10A4 (ENSSFOG00015031170) P. kingsleyae MODERN SPECIES 20 ENSPKIG00000002665 ENSPKIG00000002689 ENSPKIG00000002718 ENSPKIG00000002752 L3MBTL4 (ENSPKIG00000002776) ENSPKIG00000002835 top1mt (ENSPKIG00000002868) APCDD1 (ENSPKIG00000002906) ENSPKIG00000002935 vapal (ENSPKIG00000002952) ppp4r1 (ENSPKIG00000002980) RALBP1 (ENSPKIG00000003030) clocka (ENSPKIG00000003050) #18 tmem165 (ENSPKIG00000003086) #20 srd5a3 (ENSPKIG00000003108) #21 kdr (ENSPKIG00000003143) #22 kitb (ENSPKIG00000003235) ENSPKIG00000003262 ENSPKIG00000003272 gsx2 (ENSPKIG00000003283) ENSPKIG00000003293 lnx1 (ENSPKIG00000003323) fip1l1b (ENSPKIG00000003396) scfd2 (ENSPKIG00000003465) rasl11b (ENSPKIG00000003511) usp46 (ENSPKIG00000003550) NEK1 (ENSPKIG00000003655) sh3rf1 (ENSPKIG00000003890) cbr4 (ENSPKIG00000003928) PALLD (ENSPKIG00000003966) ENSPKIG00000004020 Clupeocephala ANCESTRAL SPECIES 165 ENSGT00390000003428 ENSGT00980000199199 ENSGT00940000177822 ENSGT00390000010172 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT01030000234788 ENSGT00390000017765.a ENSGT00940000156043 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 Euteleosteomorpha ANCESTRAL SPECIES 23 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT01030000234788 ENSGT00390000017765.a ENSGT00940000156043 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 Acanthomorphata ANCESTRAL SPECIES 21 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Cod DUPLICATION Cod MODERN SPECIES 3 ENSGMOG00000010963 ENSGMOG00000011482 ENSGMOG00000001469 ENSGMOG00000022858 ENSGMOG00000017615 #23 ENSGMOG00000014008 ENSGMOG00000029365 ENSGMOG00000023575 ENSGMOG00000032064 ENSGMOG00000010212 ENSGMOG00000036463 tmem165 (ENSGMOG00000023364) #20 ENSGMOG00000008518 ENSGMOG00000019030 #21 kdr (ENSGMOG00000023199) #22 kdr (ENSGMOG00000018994) #22 ENSGMOG00000029724 cracd (ENSGMOG00000032860) ENSGMOG00000034191 AASDH (ENSGMOG00000018953) ppat (ENSGMOG00000018950) paics (ENSGMOG00000018876) ENSGMOG00000018818 ENSGMOG00000018816 ENSGMOG00000000568 ENSGMOG00000008124 ENSGMOG00000013662 ENSGMOG00000013687 DNAI3 (ENSGMOG00000004417) SYDE2 (ENSGMOG00000022762) zgc:65873 (ENSGMOG00000029043) Cod MODERN SPECIES 3 ENSGMOG00000016369 ENSGMOG00000010963 ENSGMOG00000011482 ENSGMOG00000001469 ENSGMOG00000022858 ENSGMOG00000017615 #23 ENSGMOG00000014008 ENSGMOG00000029365 ENSGMOG00000023575 ENSGMOG00000032064 ENSGMOG00000010212 ENSGMOG00000036463 tmem165 (ENSGMOG00000023364) #20 ENSGMOG00000008518 ENSGMOG00000019030 #21 kdr (ENSGMOG00000023199) #22 kdr (ENSGMOG00000018994) #22 ENSGMOG00000029724 cracd (ENSGMOG00000032860) ENSGMOG00000034191 AASDH (ENSGMOG00000018953) ppat (ENSGMOG00000018950) paics (ENSGMOG00000018876) ENSGMOG00000018818 ENSGMOG00000018816 ENSGMOG00000000568 ENSGMOG00000008124 ENSGMOG00000013662 ENSGMOG00000013687 DNAI3 (ENSGMOG00000004417) SYDE2 (ENSGMOG00000022762) Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Pinecone sodierfish MODERN SPECIES 18 nrl (ENSMMDG00005021413) ENSMMDG00005021416 paics (ENSMMDG00005021424) ppat (ENSMMDG00005021665) ENSMMDG00005021692 ENSMMDG00005021693 AASDH (ENSMMDG00005021697) cracd (ENSMMDG00005021700) chst14 (ENSMMDG00005021701) cep135 (ENSMMDG00005021707) exoc1 (ENSMMDG00005021724) ENSMMDG00005021789 clocka (ENSMMDG00005021791) #18 tmem165 (ENSMMDG00005021793) #20 srd5a3 (ENSMMDG00005021794) #21 kdr (ENSMMDG00005021797) #22 ENSMMDG00005021802 pdgfra (ENSMMDG00005021927) ENSMMDG00005021934 gsx2 (ENSMMDG00005021936) lnx1 (ENSMMDG00005021939) scfd2 (ENSMMDG00005021950) rasl11b (ENSMMDG00005021969) usp46 (ENSMMDG00005021982) spata18 (ENSMMDG00005022136) sgcb (ENSMMDG00005022139) dcun1d4 (ENSMMDG00005022142) ociad2 (ENSMMDG00005000093) fryl (ENSMMDG00005000565) zar1 (ENSMMDG00005008904) SLC10A4 (ENSMMDG00005008905) Percomorphaceae ANCESTRAL SPECIES 12 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Tiger tail seahorse MODERN SPECIES 469 ENSHCOG00000016348 paics (ENSHCOG00000016336) ppat (ENSHCOG00000016303) ENSHCOG00000016274 ENSHCOG00000016263 AASDH (ENSHCOG00000016247) cracd (ENSHCOG00000016214) chst14 (ENSHCOG00000016132) cep135 (ENSHCOG00000016076) ENSHCOG00000016054 cep135 (ENSHCOG00000000583) exoc1 (ENSHCOG00000015996) clocka (ENSHCOG00000015967) #18 tmem165 (ENSHCOG00000015910) #20 srd5a3 (ENSHCOG00000015899) #21 kdr (ENSHCOG00000015875) #22 ENSHCOG00000015807 pdgfra (ENSHCOG00000015380) gsx2 (ENSHCOG00000015334) lnx1 (ENSHCOG00000015309) scfd2 (ENSHCOG00000015269) rasl11b (ENSHCOG00000015260) usp46 (ENSHCOG00000015254) ENSHCOG00000015224 spata18 (ENSHCOG00000015207) sgcb (ENSHCOG00000015143) dcun1d4 (ENSHCOG00000015127) ociad2 (ENSHCOG00000015099) fryl (ENSHCOG00000015075) fryl (ENSHCOG00000014981) zar1 (ENSHCOG00000014941) Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Carangaria ANCESTRAL SPECIES 7 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Carangaria_A DUPLICATION Carangaria_A ANCESTRAL SPECIES ENSGT00940000156710.q #22 Barramundi perch MODERN SPECIES 1632 ENSLCAG00010023235 #22 Carangaria_A ANCESTRAL SPECIES 3 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710.r #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Seriola ANCESTRAL SPECIES 39 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710.r #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a Greater amberjack MODERN SPECIES 65 ENSSDUG00000022729 paics (ENSSDUG00000022734) ppat (ENSSDUG00000022747) ENSSDUG00000022752 ENSSDUG00000022755 ENSSDUG00000022759 AASDH (ENSSDUG00000022765) cracd (ENSSDUG00000022769) chst14 (ENSSDUG00000022773) cep135 (ENSSDUG00000022777) exoc1 (ENSSDUG00000022788) ENSSDUG00000022826 clocka (ENSSDUG00000022844) #18 tmem165 (ENSSDUG00000022862) #20 srd5a3 (ENSSDUG00000022865) #21 kdr (ENSSDUG00000022869) #22 ENSSDUG00000022885 pdgfra (ENSSDUG00000022930) gsx2 (ENSSDUG00000022937) lnx1 (ENSSDUG00000022944) scfd2 (ENSSDUG00000022953) rasl11b (ENSSDUG00000022959) usp46 (ENSSDUG00000022963) ENSSDUG00000022974 spata18 (ENSSDUG00000022982) sgcb (ENSSDUG00000022996) dcun1d4 (ENSSDUG00000023011) ociad2 (ENSSDUG00000023024) fryl (ENSSDUG00000000072) zar1 (ENSSDUG00000000360) SLC10A4 (ENSSDUG00000000455) Yellowtail amberjack MODERN SPECIES 3218 nrl (ENSSLDG00000010415) ENSSLDG00000010392 paics (ENSSLDG00000010361) ENSSLDG00000010340 ENSSLDG00000010325 ppat (ENSSLDG00000010275) AASDH (ENSSLDG00000010209) cracd (ENSSLDG00000010171) chst14 (ENSSLDG00000010154) cep135 (ENSSLDG00000009985) exoc1 (ENSSLDG00000009862) ENSSLDG00000009806 clocka (ENSSLDG00000009655) #18 tmem165 (ENSSLDG00000009593) #20 srd5a3 (ENSSLDG00000009578) #21 kdr (ENSSLDG00000009485) #22 ENSSLDG00000009366 pdgfra (ENSSLDG00000009278) ENSSLDG00000009242 gsx2 (ENSSLDG00000009228) lnx1 (ENSSLDG00000009187) SCFD2 (ENSSLDG00000009170) ENSSLDG00000009149 rasl11b (ENSSLDG00000009128) Barramundi perch MODERN SPECIES 117 nrl (ENSLCAG00010006186) ENSLCAG00010006177 ENSLCAG00010006172 paics (ENSLCAG00010006157) ppat (ENSLCAG00010006110) ENSLCAG00010006094 ENSLCAG00010006093 cracd (ENSLCAG00010006073) chst14 (ENSLCAG00010006070) cep135 (ENSLCAG00010006047) exoc1 (ENSLCAG00010005963) nmu (ENSLCAG00010005923) #16 clocka (ENSLCAG00010005880) #18 tmem165 (ENSLCAG00010005851) #20 srd5a3 (ENSLCAG00010005818) #21 kdr (ENSLCAG00010005596) #22 ENSLCAG00010005500 ENSLCAG00010005481 pdgfra (ENSLCAG00010005216) gsx2 (ENSLCAG00010005158) lnx1 (ENSLCAG00010005156) ENSLCAG00010005150 ENSLCAG00010005145 scfd2 (ENSLCAG00010005138) rasl11b (ENSLCAG00010005133) Pleuronectoidei ANCESTRAL SPECIES 29 ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b Tongue sole MODERN SPECIES 11 nrl (ENSCSEG00000003788) ENSCSEG00000003785 ENSCSEG00000003781 paics (ENSCSEG00000003749) ppat (ENSCSEG00000003735) AASDH (ENSCSEG00000003722) cracd (ENSCSEG00000003711) chst14 (ENSCSEG00000003706) cep135 (ENSCSEG00000003685) exoc1 (ENSCSEG00000003636) ENSCSEG00000003625 ENSCSEG00000003623 ENSCSEG00000003603 srd5a3 (ENSCSEG00000003597) #21 tmem165 (ENSCSEG00000003591) #20 kdr (ENSCSEG00000003569) #22 ENSCSEG00000003542 pdgfra (ENSCSEG00000003502) gsx2 (ENSCSEG00000003487) lnx1 (ENSCSEG00000003465) ENSCSEG00000003458 ect2 (ENSCSEG00000003447) b3gnt5a (ENSCSEG00000003444) ENSCSEG00000003435 zgc:172121 (ENSCSEG00000003431) BIVM (ENSCSEG00000003425) si:ch211-201h21.5 (ENSCSEG00000003423) TMEM131 (ENSCSEG00000003378) CNGA3 (ENSCSEG00000003357) ube3a (ENSCSEG00000003344) ATP1B1 (ENSCSEG00000003338) Turbot MODERN SPECIES 3 ENSSMAG00000031217 ENSSMAG00000014868 ENSSMAG00000014825 ENSSMAG00000014818 paics (ENSSMAG00000014795) ppat (ENSSMAG00000014755) AASDH (ENSSMAG00000014726) cracd (ENSSMAG00000014713) ENSSMAG00000014706 ENSSMAG00000014628 EXOC1 (ENSSMAG00000014433) ENSSMAG00000014415 clocka (ENSSMAG00000014299) #18 tmem165 (ENSSMAG00000014283) #20 srd5a3 (ENSSMAG00000014270) #21 kdr (ENSSMAG00000014257) #22 ENSSMAG00000014222 pdgfra (ENSSMAG00000014178) gsx2 (ENSSMAG00000014168) ENSSMAG00000023937 lnx1 (ENSSMAG00000014117) scfd2 (ENSSMAG00000014072) rasl11b (ENSSMAG00000027898) usp46 (ENSSMAG00000014024) spata18 (ENSSMAG00000013996) sgcb (ENSSMAG00000013971) ENSSMAG00000013966 dcun1d4 (ENSSMAG00000013914) ociad2 (ENSSMAG00000013902) fryl (ENSSMAG00000013398) zar1 (ENSSMAG00000013312) Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Anabantoidei ANCESTRAL SPECIES 6 ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b Climbing perch MODERN SPECIES 17 ENSATEG00000015564 ENSATEG00000015520 ENSATEG00000015439 paics (ENSATEG00000015412) ppat (ENSATEG00000015379) AASDH (ENSATEG00000015370) cracd (ENSATEG00000015339) ENSATEG00000026947 ENSATEG00000015323 ENSATEG00000015299 EXOC1 (ENSATEG00000015182) ENSATEG00000015147 clocka (ENSATEG00000015122) #18 tmem165 (ENSATEG00000015107) #20 srd5a3 (ENSATEG00000015099) #21 kdr (ENSATEG00000015075) #22 ENSATEG00000015042 pdgfra (ENSATEG00000014902) gsx2 (ENSATEG00000014864) lnx1 (ENSATEG00000014847) ENSATEG00000025905 scfd2 (ENSATEG00000014799) rasl11b (ENSATEG00000014839) ENSATEG00000014784 usp46 (ENSATEG00000014752) spata18 (ENSATEG00000014736) sgcb (ENSATEG00000014716) dcun1d4 (ENSATEG00000014690) ociad2 (ENSATEG00000014671) fryl (ENSATEG00000014583) zar1 (ENSATEG00000014450) Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000020029 ENSBSLG00000020046 nrl (ENSBSLG00000020245) ENSBSLG00000020256 paics (ENSBSLG00000021043) ppat (ENSBSLG00000021225) AASDH (ENSBSLG00000000547) cracd (ENSBSLG00000000584) chst14 (ENSBSLG00000000599) cep135 (ENSBSLG00000000866) exoc1 (ENSBSLG00000000712) ENSBSLG00000000874 clocka (ENSBSLG00000001299) #18 tmem165 (ENSBSLG00000001359) #20 srd5a3 (ENSBSLG00000001368) #21 kdr (ENSBSLG00000001394) #22 ENSBSLG00000001473 pdgfra (ENSBSLG00000001662) gsx2 (ENSBSLG00000002005) lnx1 (ENSBSLG00000002161) scfd2 (ENSBSLG00000002299) rasl11b (ENSBSLG00000002539) usp46 (ENSBSLG00000002578) spata18 (ENSBSLG00000002795) ENSBSLG00000002837 dcun1d4 (ENSBSLG00000002858) ociad2 (ENSBSLG00000002877) fryl (ENSBSLG00000002973) zar1 (ENSBSLG00000003261) SLC10A4 (ENSBSLG00000003264) slain2 (ENSBSLG00000003290) Zig-zag eel MODERN SPECIES 18 ENSMAMG00000015502 ENSMAMG00000015461 paics (ENSMAMG00000015414) ppat (ENSMAMG00000027956) ENSMAMG00000015399 AASDH (ENSMAMG00000015331) cracd (ENSMAMG00000015302) ENSMAMG00000028716 ENSMAMG00000024987 ENSMAMG00000015265 EXOC1 (ENSMAMG00000015152) ENSMAMG00000015122 clocka (ENSMAMG00000015030) #18 tmem165 (ENSMAMG00000025225) #20 srd5a3 (ENSMAMG00000015009) #21 kdr (ENSMAMG00000014979) #22 ENSMAMG00000014929 pdgfra (ENSMAMG00000014846) gsx2 (ENSMAMG00000014832) lnx1 (ENSMAMG00000014781) ENSMAMG00000027823 scfd2 (ENSMAMG00000014733) rasl11b (ENSMAMG00000028038) ENSMAMG00000026894 usp46 (ENSMAMG00000014715) spata18 (ENSMAMG00000014697) sgcb (ENSMAMG00000014677) ENSMAMG00000014670 dcun1d4 (ENSMAMG00000014616) fryl (ENSMAMG00000014475) zar1 (ENSMAMG00000014184) Eupercaria ANCESTRAL SPECIES 8 ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a Tetraodontidae ANCESTRAL SPECIES 27 ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Fugu MODERN SPECIES 12 ENSTRUG00000015894 impact (ENSTRUG00000015867) OSBPL1A (ENSTRUG00000015809) paics (ENSTRUG00000015780) ENSTRUG00000027437 ENSTRUG00000029594 ppat (ENSTRUG00000015737) AASDH (ENSTRUG00000015712) cracd (ENSTRUG00000015704) chst14 (ENSTRUG00000015700) cep135 (ENSTRUG00000015615) exoc1 (ENSTRUG00000015553) clocka (ENSTRUG00000015488) #18 tmem165 (ENSTRUG00000015472) #20 srd5a3 (ENSTRUG00000020286) #21 kdr (ENSTRUG00000015383) #22 ENSTRUG00000015193 pdgfra (ENSTRUG00000015076) gsx2 (ENSTRUG00000015060) lnx1 (ENSTRUG00000014995) ENSTRUG00000031012 scfd2 (ENSTRUG00000014970) rasl11b (ENSTRUG00000021970) ENSTRUG00000027153 usp46 (ENSTRUG00000014912) sgcb (ENSTRUG00000014878) spata18 (ENSTRUG00000014899) ENSTRUG00000033037 dcun1d4 (ENSTRUG00000014849) ociad2 (ENSTRUG00000022946) fryl (ENSTRUG00000024952) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 21 MYBL1 (ENSTNIG00000010104) ENSTNIG00000004025 rrs1 (ENSTNIG00000004026) crhb (ENSTNIG00000000114) trim55b (ENSTNIG00000004027) mtfr1 (ENSTNIG00000012695) armc1 (ENSTNIG00000012696) bhlhe22 (ENSTNIG00000012697) ythdf3 (ENSTNIG00000012698) tagln3b (ENSTNIG00000012699) tagln3a (ENSTNIG00000012700) c1qtnf9 (ENSTNIG00000012701) SPATA13 (ENSTNIG00000012702) ENSTNIG00000012703 ENSTNIG00000001040 ENSTNIG00000012704 #22 pan3 (ENSTNIG00000012705) ENSTNIG00000012706 urad (ENSTNIG00000012707) pdx1 (ENSTNIG00000012708) si:ch211-140b10.6 (ENSTNIG00000012709) lnx2a (ENSTNIG00000012710) gtf3ab (ENSTNIG00000012711) rpl21 (ENSTNIG00000012712) usp12a (ENSTNIG00000012713) GPR12 (ENSTNIG00000012714) wasf3b (ENSTNIG00000012715) cdk8 (ENSTNIG00000012716) rnf6 (ENSTNIG00000012717) ATP8A2 (ENSTNIG00000012718) boc (ENSTNIG00000012719) Tetraodon MODERN SPECIES impact (ENSTNIG00000017641) OSBPL1A (ENSTNIG00000017642) CNGA3 (ENSTNIG00000017643) ube3a (ENSTNIG00000017644) paics (ENSTNIG00000017645) ppat (ENSTNIG00000017646) AASDH (ENSTNIG00000017647) cracd (ENSTNIG00000017648) chst14 (ENSTNIG00000017649) cep135 (ENSTNIG00000017650) exoc1 (ENSTNIG00000017651) ENSTNIG00000000636 tmem165 (ENSTNIG00000017653) #20 clocka (ENSTNIG00000017652) #18 srd5a3 (ENSTNIG00000017654) #21 kdr (ENSTNIG00000017655) #22 ENSTNIG00000017656 pdgfra (ENSTNIG00000017657) gsx2 (ENSTNIG00000017658) lnx1 (ENSTNIG00000017659) scfd2 (ENSTNIG00000017660) rasl11b (ENSTNIG00000017661) usp46 (ENSTNIG00000017662) spata18 (ENSTNIG00000017663) sgcb (ENSTNIG00000017664) dcun1d4 (ENSTNIG00000017665) ociad2 (ENSTNIG00000001106) fryl (ENSTNIG00000017666) zar1 (ENSTNIG00000017667) SLC10A4 (ENSTNIG00000017668) slain2 (ENSTNIG00000017669) Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a Ballan wrasse MODERN SPECIES 205 ENSLBEG00000019678 nrl (ENSLBEG00000019716) ENSLBEG00000019753 paics (ENSLBEG00000019778) ppat (ENSLBEG00000019808) AASDH (ENSLBEG00000019866) cracd (ENSLBEG00000019902) chst14 (ENSLBEG00000019980) cep135 (ENSLBEG00000020030) ENSLBEG00000020178 exoc1 (ENSLBEG00000020223) ENSLBEG00000020351 clocka (ENSLBEG00000020376) #18 tmem165 (ENSLBEG00000020475) #20 srd5a3 (ENSLBEG00000020495) #21 kdr (ENSLBEG00000020516) #22 ENSLBEG00000020579 pdgfra (ENSLBEG00000020651) gsx2 (ENSLBEG00000020746) lnx1 (ENSLBEG00000020762) scfd2 (ENSLBEG00000020803) rasl11b (ENSLBEG00000020868) usp46 (ENSLBEG00000020934) Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a Perciformes ANCESTRAL SPECIES 8 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626.b ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b ENSGT00390000017860.b Cottioidei ANCESTRAL SPECIES 5 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000165267 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626.b ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00940000156935 ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b ENSGT00390000017860.b ENSGT00390000004612 Lumpfish MODERN SPECIES 19 ENSCLMG00005000616 ENSCLMG00005000610 nrl (ENSCLMG00005000606) ENSCLMG00005000605 paics (ENSCLMG00005000303) ENSCLMG00005000284 ppat (ENSCLMG00005000150) ENSCLMG00005015355 chst14 (ENSCLMG00005015354) cep135 (ENSCLMG00005015352) exoc1 (ENSCLMG00005015325) ENSCLMG00005015321 clocka (ENSCLMG00005015319) #18 tmem165 (ENSCLMG00005015317) #20 srd5a3 (ENSCLMG00005015316) #21 kdr (ENSCLMG00005015313) #22 kita (ENSCLMG00005015027) pdgfra (ENSCLMG00005013723) gsx2 (ENSCLMG00005013694) ENSCLMG00005013693 rasl11b (ENSCLMG00005013691) usp46 (ENSCLMG00005013690) spata18 (ENSCLMG00005013689) sgcb (ENSCLMG00005013688) dcun1d4 (ENSCLMG00005013592) fryl (ENSCLMG00005012102) zar1 (ENSCLMG00005012054) SLC10A4 (ENSCLMG00005012048) slain2 (ENSCLMG00005012046) anapc4 (ENSCLMG00005010527) PALLD (ENSCLMG00005010353) Stickleback MODERN SPECIES 8 ENSGACG00000014370 ENSGACG00000014368 ENSGACG00000014362 ENSGACG00000014359 CARMIL3 (ENSGACG00000014346) ENSGACG00000014343 ppat (ENSGACG00000014340) ENSGACG00000014337 ENSGACG00000014331 ENSGACG00000014329 chst14 (ENSGACG00000014327) cep135 (ENSGACG00000014325) exoc1 (ENSGACG00000014307) tmem165 (ENSGACG00000014293) #20 srd5a3 (ENSGACG00000014292) #21 kdr (ENSGACG00000014277) #22 ENSGACG00000014273 pdgfra (ENSGACG00000014259) gsx2 (ENSGACG00000014255) lnx1 (ENSGACG00000014237) ENSGACG00000014235 scfd2 (ENSGACG00000014229) rasl11b (ENSGACG00000014223) usp46 (ENSGACG00000014219) spata18 (ENSGACG00000014206) sgcb (ENSGACG00000014199) dcun1d4 (ENSGACG00000014197) fryl (ENSGACG00000014183) ENSGACG00000014172 zar1 (ENSGACG00000014170) SLC10A4 (ENSGACG00000014162) Perciformes_a ANCESTRAL SPECIES 6 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000177822 ENSGT00390000003428 ENSGT00940000164461 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626.b ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b ENSGT00390000017860.b Channel bull blenny MODERN SPECIES 18 ENSCGOG00000024107 paics (ENSCGOG00000024093) ENSCGOG00000024089 ENSCGOG00000024087 ppat (ENSCGOG00000024064) AASDH (ENSCGOG00000024050) cracd (ENSCGOG00000024045) ENSCGOG00000024039 chst14 (ENSCGOG00000024037) cep135 (ENSCGOG00000024005) exoc1 (ENSCGOG00000023874) ENSCGOG00000023862 clocka (ENSCGOG00000023370) #18 tmem165 (ENSCGOG00000023290) #20 srd5a3 (ENSCGOG00000023287) #21 kdr (ENSCGOG00000023197) #22 ENSCGOG00000023192 ENSCGOG00000023191 pdgfra (ENSCGOG00000023117) gsx2 (ENSCGOG00000023110) lnx1 (ENSCGOG00000023107) scfd2 (ENSCGOG00000023069) rasl11b (ENSCGOG00000023066) usp46 (ENSCGOG00000022939) spata18 (ENSCGOG00000022931) sgcb (ENSCGOG00000022930) dcun1d4 (ENSCGOG00000022900) ociad2 (ENSCGOG00000022889) zgc:153738 (ENSCGOG00000022879) ENSCGOG00000022876 ENSCGOG00000022874 Pike perch MODERN SPECIES 26 nrl (ENSSLUG00000011002) ENSSLUG00000011010 paics (ENSSLUG00000011024) ppat (ENSSLUG00000011135) ENSSLUG00000011305 AASDH (ENSSLUG00000011310) cracd (ENSSLUG00000011321) ENSSLUG00000011332 chst14 (ENSSLUG00000011335) cep135 (ENSSLUG00000011343) exoc1 (ENSSLUG00000011392) ENSSLUG00000011608 clocka (ENSSLUG00000011628) #18 tmem165 (ENSSLUG00000011778) #20 srd5a3 (ENSSLUG00000011785) #21 kdr (ENSSLUG00000011959) #22 ENSSLUG00000016300 pdgfra (ENSSLUG00000016392) gsx2 (ENSSLUG00000017208) lnx1 (ENSSLUG00000017227) scfd2 (ENSSLUG00000017264) rasl11b (ENSSLUG00000017320) usp46 (ENSSLUG00000017334) spata18 (ENSSLUG00000017382) sgcb (ENSSLUG00000017391) dcun1d4 (ENSSLUG00000017410) ENSSLUG00000017436 fryl (ENSSLUG00000018059) zar1 (ENSSLUG00000024847) SLC10A4 (ENSSLUG00000024853) slain2 (ENSSLUG00000024857) Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a European seabass MODERN SPECIES 17 ENSDLAG00005011164 ENSDLAG00005011519 ENSDLAG00005011525 paics (ENSDLAG00005011556) ppat (ENSDLAG00005012004) ENSDLAG00005012018 AASDH (ENSDLAG00005012027) cracd (ENSDLAG00005012039) ENSDLAG00005012047 ENSDLAG00005012055 EXOC1 (ENSDLAG00005012108) nmu (ENSDLAG00005012368) #16 clocka (ENSDLAG00005012393) #18 tmem165 (ENSDLAG00005029939) #20 srd5a3 (ENSDLAG00005031727) #21 kdr (ENSDLAG00005012762) #22 ENSDLAG00005013194 pdgfra (ENSDLAG00005013835) gsx2 (ENSDLAG00005029442) lnx1 (ENSDLAG00005015045) ENSDLAG00005026603 scfd2 (ENSDLAG00005015123) rasl11b (ENSDLAG00005031620) usp46 (ENSDLAG00005015238) spata18 (ENSDLAG00005015274) sgcb (ENSDLAG00005027765) dcun1d4 (ENSDLAG00005033853) ociad2 (ENSDLAG00005029470) fryl (ENSDLAG00005015397) SLC10A4 (ENSDLAG00005007479) slain2 (ENSDLAG00005027601) Large yellow croaker MODERN SPECIES 489 ENSLCRG00005012571 nrl (ENSLCRG00005012573) ENSLCRG00005012574 paics (ENSLCRG00005012581) ppat (ENSLCRG00005012941) ENSLCRG00005012950 AASDH (ENSLCRG00005012951) cracd (ENSLCRG00005012952) chst14 (ENSLCRG00005012953) cep135 (ENSLCRG00005012989) exoc1 (ENSLCRG00005012962) nmu (ENSLCRG00005012990) #16 clocka (ENSLCRG00005012995) #18 tmem165 (ENSLCRG00005013576) #20 srd5a3 (ENSLCRG00005013579) #21 kdr (ENSLCRG00005013596) #22 ENSLCRG00005015456 pdgfra (ENSLCRG00005015728) gsx2 (ENSLCRG00005015875) lnx1 (ENSLCRG00005015879) scfd2 (ENSLCRG00005015885) rasl11b (ENSLCRG00005015887) usp46 (ENSLCRG00005015888) usp46 (ENSLCRG00005015890) spata18 (ENSLCRG00005015892) sgcb (ENSLCRG00005015901) ENSLCRG00005015902 dcun1d4 (ENSLCRG00005015903) ociad2 (ENSLCRG00005015906) fryl (ENSLCRG00005015909) zar1 (ENSLCRG00005016132) Gilthead seabream MODERN SPECIES 2 ENSSAUG00010003247 nrl (ENSSAUG00010003241) ENSSAUG00010002977 paics (ENSSAUG00010002956) ppat (ENSSAUG00010002760) ENSSAUG00010002752 AASDH (ENSSAUG00010002746) cracd (ENSSAUG00010002742) chst14 (ENSSAUG00010002739) cep135 (ENSSAUG00010002679) exoc1 (ENSSAUG00010002589) nmu (ENSSAUG00010002566) #16 clocka (ENSSAUG00010001441) #18 tmem165 (ENSSAUG00010001335) #20 srd5a3 (ENSSAUG00010001331) #21 kdr (ENSSAUG00010024898) #22 ENSSAUG00010024844 pdgfra (ENSSAUG00010024687) gsx2 (ENSSAUG00010024685) lnx1 (ENSSAUG00010024684) ENSSAUG00010024682 scfd2 (ENSSAUG00010024662) rasl11b (ENSSAUG00010024650) ENSSAUG00010024639 usp46 (ENSSAUG00010024606) spata18 (ENSSAUG00010024599) sgcb (ENSSAUG00010024598) dcun1d4 (ENSSAUG00010024596) ociad2 (ENSSAUG00010024595) fryl (ENSSAUG00010016788) zar1 (ENSSAUG00010016671) Ovalentaria ANCESTRAL SPECIES 9 ENSGT00390000010172 ENSGT00940000177822 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192.qb ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Aplocheiloidei ANCESTRAL SPECIES 58 ENSGT00940000177341 ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 Mangrove rivulus MODERN SPECIES 115 ENSKMAG00000004774 ENSKMAG00000004800 ENSKMAG00000004833 nrl (ENSKMAG00000004920) REM2 (ENSKMAG00000004970) paics (ENSKMAG00000004987) ppat (ENSKMAG00000005025) AASDH (ENSKMAG00000005068) cracd (ENSKMAG00000005090) chst14 (ENSKMAG00000005123) cep135 (ENSKMAG00000005140) exoc1 (ENSKMAG00000005245) clock (ENSKMAG00000005447) #18 tmem165 (ENSKMAG00000005658) #20 srd5a3 (ENSKMAG00000005686) #21 kdr (ENSKMAG00000005737) #22 ENSKMAG00000005784 pdgfra (ENSKMAG00000005825) gsx2 (ENSKMAG00000005907) lnx1 (ENSKMAG00000005932) SCFD2 (ENSKMAG00000005983) Turquoise killifish MODERN SPECIES 1626 LRRC16B (ENSNFUG00015017780) nrl (ENSNFUG00015017751) REM2 (ENSNFUG00015017746) paics (ENSNFUG00015017432) ppat (ENSNFUG00015017384) ENSNFUG00015017374 cracd (ENSNFUG00015017357) CHST14 (ENSNFUG00015017355) ENSNFUG00015017351 cep135 (ENSNFUG00015017328) exoc1 (ENSNFUG00015017279) ENSNFUG00015017259 clocka (ENSNFUG00015013952) #18 TMEM165 (ENSNFUG00015013799) #20 srd5a3 (ENSNFUG00015013792) #21 kdr (ENSNFUG00015013724) #22 ENSNFUG00015013488 PDGFRA (ENSNFUG00015011936) GSX2 (ENSNFUG00015011845) ENSNFUG00015011842 lnx1 (ENSNFUG00015011799) ENSNFUG00015011791 scfd2 (ENSNFUG00015011763) ENSNFUG00015010982 ENSNFUG00015010922 FAM20B (ENSNFUG00015010912) ANGPTL1 (ENSNFUG00015010904) ralgps2 (ENSNFUG00015010658) SELRC1 (ENSNFUG00015010621) zyg11 (ENSNFUG00015010519) echdc2 (ENSNFUG00015010470) Cyprinodontoidei ANCESTRAL SPECIES 10 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192.qb ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT01100000266834 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a Poeciliinae ANCESTRAL SPECIES 7 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192.qb ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT01100000266834 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a Poecilia ANCESTRAL SPECIES 1 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192.qb ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT01100000266834 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a NAME_6 ANCESTRAL SPECIES 15 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192.qb ENSGT00940000158643 ENSGT00940000153284.b ENSGT01100000266834 ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Amazon molly MODERN SPECIES 289 ENSPFOG00000016805 nrl (ENSPFOG00000016906) REM2 (ENSPFOG00000016915) paics (ENSPFOG00000016933) ppat (ENSPFOG00000016974) ENSPFOG00000022282 ENSPFOG00000021926 ENSPFOG00000016997 cracd (ENSPFOG00000017030) chst14 (ENSPFOG00000017042) cep135 (ENSPFOG00000017055) exoc1 (ENSPFOG00000017153) clocka (ENSPFOG00000017215) #18 tmem165 (ENSPFOG00000017287) #20 srd5a3 (ENSPFOG00000017304) #21 kdr (ENSPFOG00000017312) #22 ENSPFOG00000017402 pdgfra (ENSPFOG00000017594) gsx2 (ENSPFOG00000017687) lnx1 (ENSPFOG00000017706) scfd2 (ENSPFOG00000017765) rasl11b (ENSPFOG00000017780) usp46 (ENSPFOG00000017792) spata18 (ENSPFOG00000017824) sgcb (ENSPFOG00000017856) ENSPFOG00000024831 dcun1d4 (ENSPFOG00000017866) ociad2 (ENSPFOG00000017894) fryl (ENSPFOG00000017964) zar1 (ENSPFOG00000018279) SLC10A4 (ENSPFOG00000018286) Sailfin molly MODERN SPECIES 63 ENSPLAG00000018606 ENSPLAG00000018589 nrl (ENSPLAG00000018500) REM2 (ENSPLAG00000018479) paics (ENSPLAG00000018408) ppat (ENSPLAG00000018300) ENSPLAG00000018262 AASDH (ENSPLAG00000018248) cracd (ENSPLAG00000018222) chst14 (ENSPLAG00000018212) cep135 (ENSPLAG00000018210) exoc1 (ENSPLAG00000018193) ENSPLAG00000018102 clocka (ENSPLAG00000018067) #18 srd5a3 (ENSPLAG00000017924) #21 kdr (ENSPLAG00000017865) #22 ENSPLAG00000017839 pdgfra (ENSPLAG00000017781) ENSPLAG00000017738 Guppy MODERN SPECIES 456 ENSPREG00000020440 ENSPREG00000020271 nrl (ENSPREG00000020247) ENSPREG00000020220 paics (ENSPREG00000020202) ppat (ENSPREG00000020177) AASDH (ENSPREG00000020147) cracd (ENSPREG00000020127) chst14 (ENSPREG00000020113) cep135 (ENSPREG00000020088) exoc1 (ENSPREG00000019974) ENSPREG00000019926 clocka (ENSPREG00000019844) #18 tmem165 (ENSPREG00000019820) #20 srd5a3 (ENSPREG00000019800) #21 kdr (ENSPREG00000019671) #22 kit (ENSPREG00000019556) pdgfra (ENSPREG00000019463) gsx2 (ENSPREG00000019445) lnx1 (ENSPREG00000019417) scfd2 (ENSPREG00000019404) rasl11b (ENSPREG00000019386) ENSPREG00000019383 usp46 (ENSPREG00000019366) spata18 (ENSPREG00000019322) sgcb (ENSPREG00000019293) ENSPREG00000019283 dcun1d4 (ENSPREG00000019250) ociad2 (ENSPREG00000019231) fryl (ENSPREG00000018949) zar1 (ENSPREG00000018864) Platyfish MODERN SPECIES 23 ENSXMAG00000022704 ENSXMAG00000016807 nrl (ENSXMAG00000016819) ENSXMAG00000027141 paics (ENSXMAG00000016822) ppat (ENSXMAG00000027208) AASDH (ENSXMAG00000016856) cracd (ENSXMAG00000000731) chst14 (ENSXMAG00000030086) cep135 (ENSXMAG00000016865) exoc1 (ENSXMAG00000016901) nmu (ENSXMAG00000016922) #16 clocka (ENSXMAG00000016928) #18 tmem165 (ENSXMAG00000016958) #20 srd5a3 (ENSXMAG00000021890) #21 kdr (ENSXMAG00000013541) #22 ENSXMAG00000013503 pdgfra (ENSXMAG00000014365) gsx2 (ENSXMAG00000014362) lnx1 (ENSXMAG00000014349) scfd2 (ENSXMAG00000024678) rasl11b (ENSXMAG00000014332) usp46 (ENSXMAG00000014314) spata18 (ENSXMAG00000014298) sgcb (ENSXMAG00000014291) ENSXMAG00000029549 dcun1d4 (ENSXMAG00000014276) ociad2 (ENSXMAG00000014272) ENSXMAG00000014195 fryl (ENSXMAG00000025446) zar1 (ENSXMAG00000011812) NAME_4 ANCESTRAL SPECIES 11 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00940000178006 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192.qb ENSGT00940000158643 ENSGT00940000153284.b ENSGT01100000266834 ENSGT00390000013532 ENSGT00390000008110 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b Sheepshead minnow MODERN SPECIES 455 ENSCVAG00000011512 ENSCVAG00000011466 nrl (ENSCVAG00000011459) ENSCVAG00000011442 paics (ENSCVAG00000011427) ppat (ENSCVAG00000011415) AASDH (ENSCVAG00000011376) cracd (ENSCVAG00000011352) chst14 (ENSCVAG00000011331) cep135 (ENSCVAG00000011317) exoc1 (ENSCVAG00000011228) ENSCVAG00000011037 clocka (ENSCVAG00000011028) #18 tmem165 (ENSCVAG00000011013) #20 srd5a3 (ENSCVAG00000000299) #21 kdr (ENSCVAG00000010994) #22 ENSCVAG00000010951 pdgfra (ENSCVAG00000010913) gsx2 (ENSCVAG00000010799) lnx1 (ENSCVAG00000010782) SCFD2 (ENSCVAG00000010728) Mummichog MODERN SPECIES 694 ENSFHEG00000014059 clocka (ENSFHEG00000014042) #18 tmem165 (ENSFHEG00000014020) #20 srd5a3 (ENSFHEG00000014010) #21 kdr (ENSFHEG00000014006) #22 ENSFHEG00000013938 ENSFHEG00000013921 Oryzias ANCESTRAL SPECIES 30 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757.l ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 ENSGT00940000153441.a.a ENSGT00390000004612 ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b Oryzias_b ANCESTRAL SPECIES 35 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT01030000236612 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757.l ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00940000158460 ENSGT00940000155875 ENSGT00940000157620 ENSGT00940000153441.a.a ENSGT00390000004612 ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b ENSGT00390000012305.a Indian medaka MODERN SPECIES 34 borcs8 (ENSOMEG00000014667) ENSOMEG00000000366 mef2b (ENSOMEG00000014712) tmem161a (ENSOMEG00000014790) ENSOMEG00000014817 slc25a42 (ENSOMEG00000014870) MAU2 (ENSOMEG00000014989) gatad2ab (ENSOMEG00000015024) yjefn3 (ENSOMEG00000015046) CILP2 (ENSOMEG00000015055) ENSOMEG00000015073 ENSOMEG00000015087 midn (ENSOMEG00000015128) ect2 (ENSOMEG00000000925) srd5a3 (ENSOMEG00000015464) #21 kdr (ENSOMEG00000015503) #22 ENSOMEG00000015560 pdgfra (ENSOMEG00000015665) gsx2 (ENSOMEG00000015693) ENSOMEG00000015704 lnx1 (ENSOMEG00000015729) scfd2 (ENSOMEG00000015755) rasl11b (ENSOMEG00000015767) usp46 (ENSOMEG00000015795) NEK1 (ENSOMEG00000016168) sh3rf1 (ENSOMEG00000016279) cbr4 (ENSOMEG00000016327) ENSOMEG00000016354 ENSOMEG00000016376 ENSOMEG00000016390 slain2 (ENSOMEG00000016407) Javanese ricefish MODERN SPECIES 18 ENSOJAG00000006393 ENSOJAG00000006415 nrl (ENSOJAG00000006975) ENSOJAG00000006986 paics (ENSOJAG00000007026) ppat (ENSOJAG00000007110) ENSOJAG00000007435 ENSOJAG00000007447 cracd (ENSOJAG00000007540) ENSOJAG00000007574 chst14 (ENSOJAG00000007623) nmu (ENSOJAG00000008125) #16 clocka (ENSOJAG00000008214) #18 tmem165 (ENSOJAG00000009585) #20 srd5a3 (ENSOJAG00000009592) #21 kdr (ENSOJAG00000009617) #22 ENSOJAG00000010399 pdgfra (ENSOJAG00000010790) gsx2 (ENSOJAG00000012065) lnx1 (ENSOJAG00000012082) scfd2 (ENSOJAG00000012150) rasl11b (ENSOJAG00000012284) usp46 (ENSOJAG00000012313) ENSOJAG00000012542 sh3rf1 (ENSOJAG00000012598) cbr4 (ENSOJAG00000012724) PALLD (ENSOJAG00000012805) anapc4 (ENSOJAG00000013498) ENSOJAG00000000071 slain2 (ENSOJAG00000000153) SLC10A4 (ENSOJAG00000000178) Oryzias_a ANCESTRAL SPECIES 87 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757.l ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00940000158460 ENSGT00940000157620 ENSGT00940000153441.a.a ENSGT00390000004612 ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b ENSGT00390000012305.a ENSGT00610000086058.a Japanese Medaka HdrR MODERN SPECIES 18 ENSORLG00000022033 chst14 (ENSORLG00000000671) cep135 (ENSORLG00000000659) exoc1 (ENSORLG00000000634) clocka (ENSORLG00000028401) #18 tmem165 (ENSORLG00000000614) #20 srd5a3 (ENSORLG00000000608) #21 ENSORLG00000028653 ENSORLG00000023174 ENSORLG00000029756 kdr (ENSORLG00000000592) #22 ENSORLG00000026828 ENSORLG00000022877 ENSORLG00000027109 ENSORLG00000000569 pdgfra (ENSORLG00000019815) gsx2 (ENSORLG00000019791) ENSORLG00000024403 ENSORLG00000023867 ENSORLG00000022408 lnx1 (ENSORLG00000000492) scfd2 (ENSORLG00000000475) rasl11b (ENSORLG00000000467) usp46 (ENSORLG00000000451) ENSORLG00000022131 ENSORLG00000000439 Chinese medaka MODERN SPECIES 135 kdr (ENSOSIG00000007139) #22 ENSOSIG00000007145 ENSOSIG00000007148 Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000164461 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a Pomacentridae ANCESTRAL SPECIES 14 ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Amphiprion ANCESTRAL SPECIES 2 ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT01060000248860 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Orange clownfish MODERN SPECIES 11 nrl (ENSAPEG00000014565) ENSAPEG00000014573 ENSAPEG00000014586 paics (ENSAPEG00000014620) ppat (ENSAPEG00000014638) ENSAPEG00000014684 AASDH (ENSAPEG00000014696) cracd (ENSAPEG00000014714) chst14 (ENSAPEG00000014748) cep135 (ENSAPEG00000014755) exoc1 (ENSAPEG00000014889) ENSAPEG00000015031 clocka (ENSAPEG00000015065) #18 tmem165 (ENSAPEG00000015106) #20 srd5a3 (ENSAPEG00000015129) #21 kdr (ENSAPEG00000015136) #22 ENSAPEG00000015242 pdgfra (ENSAPEG00000015265) gsx2 (ENSAPEG00000015352) lnx1 (ENSAPEG00000015366) scfd2 (ENSAPEG00000015405) rasl11b (ENSAPEG00000015415) usp46 (ENSAPEG00000015425) spata18 (ENSAPEG00000015467) sgcb (ENSAPEG00000015597) ENSAPEG00000015623 dcun1d4 (ENSAPEG00000015630) ociad2 (ENSAPEG00000015671) fryl (ENSAPEG00000015684) ENSAPEG00000015838 zar1 (ENSAPEG00000015876) Clown anemonefish MODERN SPECIES 1006 ENSAOCG00000004661 nrl (ENSAOCG00000004674) ENSAOCG00000004695 paics (ENSAOCG00000004706) ppat (ENSAOCG00000002299) ENSAOCG00000004736 AASDH (ENSAOCG00000004796) cracd (ENSAOCG00000004826) chst14 (ENSAOCG00000004832) cep135 (ENSAOCG00000002777) exoc1 (ENSAOCG00000004948) ENSAOCG00000004989 clocka (ENSAOCG00000005003) #18 tmem165 (ENSAOCG00000005020) #20 srd5a3 (ENSAOCG00000005027) #21 kdr (ENSAOCG00000005049) #22 ENSAOCG00000005066 pdgfra (ENSAOCG00000005156) gsx2 (ENSAOCG00000005181) lnx1 (ENSAOCG00000005236) ENSAOCG00000002811 scfd2 (ENSAOCG00000005262) rasl11b (ENSAOCG00000005269) usp46 (ENSAOCG00000005298) Spiny chromis MODERN SPECIES 517 cracd (ENSAPOG00000021474) chst14 (ENSAPOG00000021450) cep135 (ENSAPOG00000021413) exoc1 (ENSAPOG00000021247) nmu (ENSAPOG00000021136) #16 clocka (ENSAPOG00000021125) #18 tmem165 (ENSAPOG00000021036) #20 srd5a3 (ENSAPOG00000021031) #21 kdr (ENSAPOG00000021018) #22 ENSAPOG00000020993 pdgfra (ENSAPOG00000000602) gsx2 (ENSAPOG00000020868) lnx1 (ENSAPOG00000020855) scfd2 (ENSAPOG00000020816) rasl11b (ENSAPOG00000020798) usp46 (ENSAPOG00000020770) ENSAPOG00000020719 spata18 (ENSAPOG00000020686) Bicolor damselfish MODERN SPECIES 266 ENSSPAG00000015820 ENSSPAG00000015386 clocka (ENSSPAG00000015313) #18 tmem165 (ENSSPAG00000015288) #20 srd5a3 (ENSSPAG00000015273) #21 kdr (ENSSPAG00000015223) #22 ENSSPAG00000015156 pdgfra (ENSSPAG00000015026) gsx2 (ENSSPAG00000014991) lnx1 (ENSSPAG00000014954) scfd2 (ENSSPAG00000014934) rasl11b (ENSSPAG00000014922) usp46 (ENSSPAG00000014882) spata18 (ENSSPAG00000014812) sgcb (ENSSPAG00000014775) dcun1d4 (ENSSPAG00000014740) ociad2 (ENSSPAG00000014723) fryl (ENSSPAG00000014622) ENSSPAG00000014589 zar1 (ENSSPAG00000014544) SLC10A4 (ENSSPAG00000014528) Cichlidae ANCESTRAL SPECIES 17 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000164461 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Midas cichlid MODERN SPECIES 922 PAICS (ENSACIG00000023102) ppat (ENSACIG00000023113) ENSACIG00000023124 ENSACIG00000023132 AASDH (ENSACIG00000023144) cracd (ENSACIG00000023186) chst14 (ENSACIG00000023193) cep135 (ENSACIG00000023209) exoc1 (ENSACIG00000023267) ENSACIG00000023275 clocka (ENSACIG00000023283) #18 tmem165 (ENSACIG00000023294) #20 srd5a3 (ENSACIG00000023307) #21 ENSACIG00000023317 kdr (ENSACIG00000023323) #22 ENSACIG00000023347 pdgfra (ENSACIG00000023436) ENSACIG00000023450 gsx2 (ENSACIG00000023455) lnx1 (ENSACIG00000023458) scfd2 (ENSACIG00000023467) rasl11b (ENSACIG00000023481) usp46 (ENSACIG00000023483) ENSACIG00000023489 ENSACIG00000023499 spata18 (ENSACIG00000023503) sgcb (ENSACIG00000023518) dcun1d4 (ENSACIG00000023521) ociad2 (ENSACIG00000023525) fryl (ENSACIG00000023550) Pseudocrenilabrinae ANCESTRAL SPECIES 10 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000177822 ENSGT00940000164461.ib ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b Nile tilapia MODERN SPECIES 14 ENSONIG00000028680 ENSONIG00000002900 nrl (ENSONIG00000002907) ENSONIG00000002910 paics (ENSONIG00000002913) ppat (ENSONIG00000002917) AASDH (ENSONIG00000002923) cracd (ENSONIG00000002929) chst14 (ENSONIG00000002930) cep135 (ENSONIG00000002931) exoc1 (ENSONIG00000002936) nmu (ENSONIG00000002941) #16 clocka (ENSONIG00000002943) #18 tmem165 (ENSONIG00000002956) #20 srd5a3 (ENSONIG00000027790) #21 kdr (ENSONIG00000002960) #22 ENSONIG00000002981 pdgfra (ENSONIG00000003001) gsx2 (ENSONIG00000003021) ENSONIG00000037500 lnx1 (ENSONIG00000003022) scfd2 (ENSONIG00000003029) rasl11b (ENSONIG00000003031) usp46 (ENSONIG00000003033) spata18 (ENSONIG00000003034) sgcb (ENSONIG00000003042) dcun1d4 (ENSONIG00000003048) ociad2 (ENSONIG00000003049) fryl (ENSONIG00000003053) zar1 (ENSONIG00000003067) SLC10A4 (ENSONIG00000003068) Pseudocrenilabrinae_A ANCESTRAL SPECIES 16 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000177822.a ENSGT00940000164461.ib ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b Lyretail cichlid MODERN SPECIES 307 ENSNBRG00000002365 paics (ENSNBRG00000002429) ppat (ENSNBRG00000002473) ENSNBRG00000002512 ENSNBRG00000002522 ENSNBRG00000002535 AASDH (ENSNBRG00000002567) ENSNBRG00000002798 chst14 (ENSNBRG00000002817) cep135 (ENSNBRG00000002846) exoc1 (ENSNBRG00000003066) ENSNBRG00000003145 clocka (ENSNBRG00000003188) #18 tmem165 (ENSNBRG00000003248) #20 srd5a3 (ENSNBRG00000003273) #21 kdr (ENSNBRG00000003289) #22 ENSNBRG00000003427 pdgfra (ENSNBRG00000003739) gsx2 (ENSNBRG00000003825) lnx1 (ENSNBRG00000003845) scfd2 (ENSNBRG00000003901) rasl11b (ENSNBRG00000003915) usp46 (ENSNBRG00000003927) spata18 (ENSNBRG00000003958) sgcb (ENSNBRG00000004007) dcun1d4 (ENSNBRG00000004035) ociad2 (ENSNBRG00000004076) fryl (ENSNBRG00000004127) zar1 (ENSNBRG00000004254) SLC10A4 (ENSNBRG00000004325) slain2 (ENSNBRG00000004362) Haplochromini ANCESTRAL SPECIES 16 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000177822.a ENSGT00940000164461.ib ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b Burton s mouthbrooder MODERN SPECIES 324 ENSHBUG00000016025 paics (ENSHBUG00000016002) ppat (ENSHBUG00000000467) ENSHBUG00000015784 ENSHBUG00000015772 ENSHBUG00000015761 AASDH (ENSHBUG00000015740) cracd (ENSHBUG00000015715) chst14 (ENSHBUG00000015698) cep135 (ENSHBUG00000015679) exoc1 (ENSHBUG00000015647) ENSHBUG00000015442 clock (ENSHBUG00000015414) #18 tmem165 (ENSHBUG00000015171) #20 srd5a3 (ENSHBUG00000015146) #21 kdr (ENSHBUG00000015135) #22 ENSHBUG00000015115 pdgfra (ENSHBUG00000015082) gsx2 (ENSHBUG00000015055) lnx1 (ENSHBUG00000015040) scfd2 (ENSHBUG00000014957) rasl11b (ENSHBUG00000014917) usp46 (ENSHBUG00000014894) spata18 (ENSHBUG00000014854) sgcb (ENSHBUG00000014847) ENSHBUG00000014822 dcun1d4 (ENSHBUG00000014816) ociad2 (ENSHBUG00000000434) fryl (ENSHBUG00000014763) zar1 (ENSHBUG00000014633) SLC10A4 (ENSHBUG00000014576) Haplochromini_A ANCESTRAL SPECIES 15 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000177822.a ENSGT00940000164461.ib ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b ENSGT00390000017860.b P. nyererei MODERN SPECIES 341 ENSPNYG00000010200 paics (ENSPNYG00000010239) ppat (ENSPNYG00000010303) ENSPNYG00000010340 ENSPNYG00000010349 ENSPNYG00000010359 AASDH (ENSPNYG00000010404) cracd (ENSPNYG00000010505) chst14 (ENSPNYG00000010527) cep135 (ENSPNYG00000010555) exoc1 (ENSPNYG00000010665) ENSPNYG00000010738 clocka (ENSPNYG00000010759) #18 tmem165 (ENSPNYG00000010804) #20 srd5a3 (ENSPNYG00000010823) #21 kdr (ENSPNYG00000010836) #22 ENSPNYG00000010935 pdgfra (ENSPNYG00000011115) gsx2 (ENSPNYG00000011191) ENSPNYG00000011200 lnx1 (ENSPNYG00000011221) scfd2 (ENSPNYG00000011260) rasl11b (ENSPNYG00000011286) usp46 (ENSPNYG00000011311) spata18 (ENSPNYG00000011335) sgcb (ENSPNYG00000011404) dcun1d4 (ENSPNYG00000011443) ociad2 (ENSPNYG00000011490) fryl (ENSPNYG00000011531) zar1 (ENSPNYG00000011639) SLC10A4 (ENSPNYG00000011655) Haplochromini_B ANCESTRAL SPECIES 10 ENSGT00940000157990.a.b ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172.qb ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649 ENSGT00940000158640 ENSGT00940000176973 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000156043 ENSGT00940000158757 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b ENSGT00390000017860.b Zebra mbuna MODERN SPECIES 1105 ENSMZEG00005020068 nrl (ENSMZEG00005020079) ENSMZEG00005020083 paics (ENSMZEG00005020089) ppat (ENSMZEG00005020102) ENSMZEG00005020114 AASDH (ENSMZEG00005020117) cracd (ENSMZEG00005020128) chst14 (ENSMZEG00005020136) cep135 (ENSMZEG00005020143) exoc1 (ENSMZEG00005020158) ENSMZEG00005020197 clocka (ENSMZEG00005020202) #18 tmem165 (ENSMZEG00005020209) #20 srd5a3 (ENSMZEG00005020214) #21 kdr (ENSMZEG00005020217) #22 ENSMZEG00005020225 pdgfra (ENSMZEG00005020232) gsx2 (ENSMZEG00005020245) lnx1 (ENSMZEG00005020255) scfd2 (ENSMZEG00005020271) rasl11b (ENSMZEG00005020278) usp46 (ENSMZEG00005020283) spata18 (ENSMZEG00005020290) sgcb (ENSMZEG00005020295) dcun1d4 (ENSMZEG00005020307) ociad2 (ENSMZEG00005020319) fryl (ENSMZEG00005020330) zar1 (ENSMZEG00005020354) ENSMZEG00005020371 ENSMZEG00005020463 Eastern happy DUPLICATION Eastern happy MODERN SPECIES 21 trim55b (ENSACLG00000026040) pde7a (ENSACLG00000026048) mtfr1 (ENSACLG00000026111) armc1 (ENSACLG00000026121) bhlhe22 (ENSACLG00000026131) ythdf3 (ENSACLG00000026145) tagln3b (ENSACLG00000026155) tagln3a (ENSACLG00000026174) c1qtnf9 (ENSACLG00000026181) ENSACLG00000026184 ENSACLG00000026194 ENSACLG00000026212 ENSACLG00000026223 ENSACLG00000026231 ENSACLG00000026248 ENSACLG00000026260 #22 pan3 (ENSACLG00000026314) ENSACLG00000026361 pdx1 (ENSACLG00000026382) urad (ENSACLG00000026387) si:ch211-140b10.6 (ENSACLG00000026398) lnx2a (ENSACLG00000026401) gtf3ab (ENSACLG00000026436) rpl21 (ENSACLG00000026444) usp12a (ENSACLG00000026460) GPR12 (ENSACLG00000026478) wasf3b (ENSACLG00000026485) cdk8 (ENSACLG00000026495) rnf6 (ENSACLG00000026519) ATP8A2 (ENSACLG00000026526) SHISA2 (ENSACLG00000026696) Eastern happy MODERN SPECIES 14 nrl (ENSACLG00000015049) ENSACLG00000015067 paics (ENSACLG00000015102) ppat (ENSACLG00000015156) ENSACLG00000015176 AASDH (ENSACLG00000015189) cracd (ENSACLG00000015216) chst14 (ENSACLG00000015245) cep135 (ENSACLG00000015261) exoc1 (ENSACLG00000015314) ENSACLG00000015626 ENSACLG00000015659 clocka (ENSACLG00000015677) #18 tmem165 (ENSACLG00000015759) #20 srd5a3 (ENSACLG00000015777) #21 kdr (ENSACLG00000015795) #22 ENSACLG00000015839 pdgfra (ENSACLG00000015927) gsx2 (ENSACLG00000016041) ENSACLG00000016058 lnx1 (ENSACLG00000016117) scfd2 (ENSACLG00000016140) rasl11b (ENSACLG00000016163) usp46 (ENSACLG00000016187) ENSACLG00000016231 ENSACLG00000016237 spata18 (ENSACLG00000016247) sgcb (ENSACLG00000016281) dcun1d4 (ENSACLG00000016317) ociad2 (ENSACLG00000016413) fryl (ENSACLG00000016455) Protacanthopterygii ANCESTRAL SPECIES 34 ENSGT00940000166379 ENSGT00940000160062.b ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003428 ENSGT00670000099343 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000162640 ENSGT00940000165649.e ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000163955 ENSGT00940000156043 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000178313 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Northern pike MODERN SPECIES 7 ENSELUG00000003870 nrl (ENSELUG00000003877) ENSELUG00000003891 paics (ENSELUG00000003937) ppat (ENSELUG00000003992) ENSELUG00000004031 AASDH (ENSELUG00000004068) cracd (ENSELUG00000004112) chst14 (ENSELUG00000028149) cep135 (ENSELUG00000004169) exoc1 (ENSELUG00000004265) nmu (ENSELUG00000004311) #16 clocka (ENSELUG00000004330) #18 tmem165 (ENSELUG00000004349) #20 srd5a3 (ENSELUG00000004363) #21 kdr (ENSELUG00000004401) #22 ENSELUG00000004435 pdgfra (ENSELUG00000004492) ENSELUG00000004512 gsx2 (ENSELUG00000004520) lnx1 (ENSELUG00000004536) ENSELUG00000004607 ENSELUG00000025665 scfd2 (ENSELUG00000004645) rasl11b (ENSELUG00000004657) ENSELUG00000031595 usp46 (ENSELUG00000004689) spata18 (ENSELUG00000004770) sgcb (ENSELUG00000004846) ENSELUG00000031651 dcun1d4 (ENSELUG00000004925) Salmoninae ANCESTRAL SPECIES 60 ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00940000164461 ENSGT00390000003428.f ENSGT00670000099343.a ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c ENSGT00940000165649.e ENSGT00940000158640.i ENSGT00510000048726.a #16 ENSGT00940000157580.a.a.d #18 ENSGT00390000005261.e #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626.fd.a ENSGT00940000156021.c ENSGT00940000163955.u.a ENSGT00940000156043.gb.b ENSGT00940000158757.n ENSGT00940000162578 ENSGT00940000155626.gd ENSGT00390000011192.nb ENSGT00940000158643.g ENSGT00940000153284.b.r ENSGT00390000013532.s ENSGT00390000008110.e ENSGT00390000014817.a ENSGT00940000156935.q ENSGT00610000086058.a.ib.a Salmoninae_a ANCESTRAL SPECIES 46 ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00940000164461 ENSGT00390000003428.f ENSGT00670000099343.a ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c ENSGT00940000165649.e ENSGT00940000158640.i ENSGT00510000048726.a #16 ENSGT00940000157580.a.a.d #18 ENSGT00390000005261.e #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626.fd.a ENSGT00940000156021.c ENSGT00940000163955.u.a ENSGT00940000156043.gb.b ENSGT00940000158757.n ENSGT00940000162578 ENSGT00940000155626.gd ENSGT00390000011192.nb ENSGT00940000158643.g ENSGT00940000153284.b.r ENSGT00390000013532.s ENSGT00390000008110.e ENSGT00390000014817.a ENSGT00940000156935.q ENSGT00610000086058.a.ib.a Oncorhynchus ANCESTRAL SPECIES ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00940000164461.lb ENSGT00390000003428.f ENSGT00670000099343.a ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c ENSGT00940000165649.e ENSGT00940000158640.i ENSGT00510000048726.a #16 ENSGT00940000157580.a.a.d #18 ENSGT00390000005261.e #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626.fd.a ENSGT00940000156021.c ENSGT00940000163955.u.a ENSGT00940000156043.gb.b ENSGT00940000158757.n ENSGT00940000162578 ENSGT00940000155626.gd ENSGT00390000011192.nb ENSGT00940000158643.g ENSGT00940000153284.b.r ENSGT00390000013532.s ENSGT00390000008110.e ENSGT00390000014817.a ENSGT00940000156935.q ENSGT01010000230241 Rainbow trout MODERN SPECIES 22 ENSOMYG00000068922 paics (ENSOMYG00000011122) ENSOMYG00000048628 ppat (ENSOMYG00000011044) AASDH (ENSOMYG00000010991) cracd (ENSOMYG00000010956) ENSOMYG00000050697 ENSOMYG00000010912 EXOC1 (ENSOMYG00000010347) nmu (ENSOMYG00000063104) #16 ENSOMYG00000075108 ENSOMYG00000072018 clocka (ENSOMYG00000007903) #18 tmem165 (ENSOMYG00000005927) #20 srd5a3 (ENSOMYG00000005902) #21 kdr (ENSOMYG00000005763) #22 ENSOMYG00000004573 pdgfra (ENSOMYG00000003367) ENSOMYG00000057366 ENSOMYG00000048535 gsx2 (ENSOMYG00000003156) lnx1 (ENSOMYG00000003106) ENSOMYG00000003094 rasl11b (ENSOMYG00000003059) usp46 (ENSOMYG00000003034) spata18 (ENSOMYG00000003001) sgcb (ENSOMYG00000002984) ENSOMYG00000066474 dcun1d4 (ENSOMYG00000076099) ENSOMYG00000002930 fryl (ENSOMYG00000002688) Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000157990.a.b.a ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00390000003428.f ENSGT00670000099343.a ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c ENSGT00940000165649.e ENSGT00940000158640.i ENSGT00510000048726.a #16 ENSGT00940000157580.a.a.d #18 ENSGT00390000005261.e #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626.fd.a ENSGT00940000156021.c ENSGT00940000163955.u.a ENSGT00940000156043.gb.b ENSGT00940000158757.n ENSGT00940000162578 ENSGT00940000155626.gd ENSGT00390000011192.nb ENSGT00940000158643.g ENSGT00940000153284.b.r ENSGT00390000013532.s ENSGT00390000008110.e ENSGT00390000014817.a ENSGT00940000156935.q ENSGT01010000230241 Chinook salmon MODERN SPECIES ENSOTSG00005032858 nrl (ENSOTSG00005032855) ENSOTSG00005032851 paics (ENSOTSG00005031944) ppat (ENSOTSG00005031930) ENSOTSG00005031928 AASDH (ENSOTSG00005031923) cracd (ENSOTSG00005031922) chst14 (ENSOTSG00005031918) cep135 (ENSOTSG00005031907) exoc1 (ENSOTSG00005030959) nmu (ENSOTSG00005030938) #16 clocka (ENSOTSG00005026929) #18 tmem165 (ENSOTSG00005026893) #20 srd5a3 (ENSOTSG00005026892) #21 kdr (ENSOTSG00005026889) #22 KIT (ENSOTSG00005026188) pdgfra (ENSOTSG00005023333) ENSOTSG00005023305 gsx2 (ENSOTSG00005023304) lnx1 (ENSOTSG00005023298) ENSOTSG00005023294 SCFD2 (ENSOTSG00005023293) rasl11b (ENSOTSG00005023291) usp46 (ENSOTSG00005023288) spata18 (ENSOTSG00005023280) sgcb (ENSOTSG00005023278) ENSOTSG00005023277 dcun1d4 (ENSOTSG00005037379) fryl (ENSOTSG00005030747) zar1 (ENSOTSG00005030703) Coho salmon MODERN SPECIES 1 ENSOKIG00005018960 ENSOKIG00005018894 nrl (ENSOKIG00005018887) ENSOKIG00005018867 paics (ENSOKIG00005018350) ppat (ENSOKIG00005018219) AASDH (ENSOKIG00005018135) cracd (ENSOKIG00005018108) chst14 (ENSOKIG00005018099) cep135 (ENSOKIG00005018058) exoc1 (ENSOKIG00005017767) nmu (ENSOKIG00005017696) #16 clocka (ENSOKIG00005015894) #18 tmem165 (ENSOKIG00005015811) #20 srd5a3 (ENSOKIG00005015800) #21 kdr (ENSOKIG00005015548) #22 ENSOKIG00005014748 pdgfra (ENSOKIG00005014183) ENSOKIG00005014124 gsx2 (ENSOKIG00005014117) lnx1 (ENSOKIG00005014080) ENSOKIG00005014053 ENSOKIG00005014036 rasl11b (ENSOKIG00005014032) usp46 (ENSOKIG00005013955) spata18 (ENSOKIG00005013909) sgcb (ENSOKIG00005013885) ENSOKIG00005013880 dcun1d4 (ENSOKIG00005013788) ENSOKIG00005013758 FRYL (ENSOKIG00005003881) Salmo ANCESTRAL SPECIES 20 ENSGT00940000157990.a.b.a ENSGT00940000166379.b ENSGT00940000160062.b.d ENSGT00390000010172.tb ENSGT00390000003428.f ENSGT00440000033811 ENSGT00940000161471.g ENSGT00940000162640.c ENSGT00940000165649.e ENSGT00940000158640.i ENSGT00940000176973.b ENSGT00510000048726.a #16 ENSGT00940000157580.a.a.d #18 ENSGT00390000005261.e #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626.fd.a ENSGT00940000156021.c ENSGT00940000163955.u.a ENSGT00940000156043.gb.b ENSGT00940000158757.n ENSGT00940000162578 ENSGT00940000155626.gd ENSGT00390000011192.nb ENSGT00940000158643.g ENSGT00940000153284.b.r ENSGT00390000013532.s ENSGT00390000008110.e ENSGT00390000014817.a ENSGT00940000156935.q ENSGT01060000253710 Atlantic salmon MODERN SPECIES 15 ENSSSAG00000040731 ENSSSAG00000040748 paics (ENSSSAG00000040893) ppat (ENSSSAG00000042182) ENSSSAG00000121485 ENSSSAG00000083847 AASDH (ENSSSAG00000042247) cracd (ENSSSAG00000042849) ENSSSAG00000042869 cep135 (ENSSSAG00000042894) EXOC1 (ENSSSAG00000043634) nmu (ENSSSAG00000056076) #16 clock (ENSSSAG00000056165) #18 tmem165 (ENSSSAG00000003834) #20 srd5a3 (ENSSSAG00000066169) #21 kdr (ENSSSAG00000066215) #22 ENSSSAG00000066926 pdgfra (ENSSSAG00000070237) ENSSSAG00000096057 gsx2 (ENSSSAG00000107960) lnx1 (ENSSSAG00000072728) ENSSSAG00000085231 SCFD2 (ENSSSAG00000072753) rasl11b (ENSSSAG00000114250) usp46 (ENSSSAG00000107643) spata18 (ENSSSAG00000073137) sgcb (ENSSSAG00000101387) ENSSSAG00000073157 dcun1d4 (ENSSSAG00000082731) ENSSSAG00000089537 fryl (ENSSSAG00000073543) River trout MODERN SPECIES 33 ENSSTUG00000000411 ENSSTUG00000000448 nrl (ENSSTUG00000000474) ENSSTUG00000000485 paics (ENSSTUG00000000523) ppat (ENSSTUG00000000699) AASDH (ENSSTUG00000000719) cracd (ENSSTUG00000000803) chst14 (ENSSTUG00000000810) cep135 (ENSSTUG00000000825) exoc1 (ENSSTUG00000000912) ENSSTUG00000001087 clocka (ENSSTUG00000001212) #18 tmem165 (ENSSTUG00000002517) #20 srd5a3 (ENSSTUG00000002527) #21 kdr (ENSSTUG00000002560) #22 ENSSTUG00000002955 pdgfra (ENSSTUG00000003608) ENSSTUG00000005901 gsx2 (ENSSTUG00000005907) lnx1 (ENSSTUG00000005920) ENSSTUG00000005954 SCFD2 (ENSSTUG00000005961) rasl11b (ENSSTUG00000006054) usp46 (ENSSTUG00000006077) spata18 (ENSSTUG00000006435) sgcb (ENSSTUG00000006466) ENSSTUG00000006472 dcun1d4 (ENSSTUG00000006487) ENSSTUG00000006595 fryl (ENSSTUG00000006732) Huchen DUPLICATION Huchen MODERN SPECIES 2216 ENSHHUG00000034311 #22 pan3 (ENSHHUG00000034321) ENSHHUG00000034453 pdx1 (ENSHHUG00000034473) ENSHHUG00000034477 lnx2a (ENSHHUG00000034490) ENSHHUG00000034499 gtf3ab (ENSHHUG00000034502) rpl21 (ENSHHUG00000034507) usp12a (ENSHHUG00000034545) GPR12 (ENSHHUG00000034663) wasf3b (ENSHHUG00000034667) cdk8 (ENSHHUG00000034673) rnf6 (ENSHHUG00000034718) ATP8A2 (ENSHHUG00000034723) Huchen MODERN SPECIES 603 kdr (ENSHHUG00000009940) #22 ENSHHUG00000009828 pdgfra (ENSHHUG00000009274) ENSHHUG00000009246 gsx2 (ENSHHUG00000009235) lnx1 (ENSHHUG00000009124) ENSHHUG00000008902 SCFD2 (ENSHHUG00000008864) rasl11b (ENSHHUG00000008852) usp46 (ENSHHUG00000008591) spata18 (ENSHHUG00000008545) sgcb (ENSHHUG00000008526) ENSHHUG00000008517 dcun1d4 (ENSHHUG00000008415) FRYL (ENSHHUG00000006591) zar1 (ENSHHUG00000006535) Otomorpha ANCESTRAL SPECIES 206 ENSGT00390000010172 ENSGT00390000003428 ENSGT00980000199199 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165649 ENSGT00940000162640 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a Otophysi ANCESTRAL SPECIES 12 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.a.a.a ENSGT00950000182879.a.b.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00980000199199 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165649 ENSGT00940000162640 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00530000063690.a.a ENSGT00610000086058.a Characiphysae ANCESTRAL SPECIES 24 ENSGT00950000182879.a.b.b ENSGT01100000263516.a.b.b.b.b.a.a.a.b.a ENSGT01100000263516.a.b.b.b.b.a.a.a.b.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00980000199199 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165649 ENSGT00940000162640 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00390000003601.b.c.b ENSGT00530000063690.a.a Channel catfish MODERN SPECIES 17 ENSIPUG00000011076 ENSIPUG00000011018 Trim16 (ENSIPUG00000010996) ENSIPUG00000010982 paics (ENSIPUG00000010915) PPAT (ENSIPUG00000010878) si:dkeyp-117h8.4 (ENSIPUG00000010862) aasdh (ENSIPUG00000010788) cracd (ENSIPUG00000010774) cep135 (ENSIPUG00000010732) chst14 (ENSIPUG00000010720) EXOC1 (ENSIPUG00000010546) nmu (ENSIPUG00000010481) #16 clock (ENSIPUG00000010325) #18 TMEM165 (ENSIPUG00000010308) #20 kdr (ENSIPUG00000010273) #22 kit (ENSIPUG00000010216) pdgfra (ENSIPUG00000010113) ENSIPUG00000010094 gsx2 (ENSIPUG00000010087) lnx1 (ENSIPUG00000010012) Scfd2 (ENSIPUG00000009970) rasl11b (ENSIPUG00000009956) usp46 (ENSIPUG00000009880) spata18 (ENSIPUG00000009850) SGCB (ENSIPUG00000009827) lrrc66 (ENSIPUG00000009822) dcun1d4 (ENSIPUG00000009816) OCIAD2 (ENSIPUG00000009794) FRYL (ENSIPUG00000009363) zar1 (ENSIPUG00000009252) Characiphysae_b ANCESTRAL SPECIES 23 ENSGT01100000263516.a.b.b.b.b.a.a.a.b.a ENSGT01100000263516.a.b.b.b.b.a.a.a.b.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00940000164461 ENSGT00980000199199 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165649 ENSGT00940000162640 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00390000003601.b.c.b ENSGT00530000063690.a.a Characoidei ANCESTRAL SPECIES 21 ENSGT00950000182879.a.b.b.m ENSGT01100000263516.a.b.b.b.b.a.a.a.b.a ENSGT01100000263516.a.b.b.b.b.a.a.a.b.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00980000199199 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165649 ENSGT00940000162640 ENSGT00940000158640 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00390000003601.b.c.b ENSGT00530000063690.a.a ENSGT00610000086058.a Red-bellied piranha MODERN SPECIES 13 ENSPNAG00000009049 ENSPNAG00000009058 ENSPNAG00000009072 paics (ENSPNAG00000009112) ppat (ENSPNAG00000009144) si:dkeyp-117h8.4 (ENSPNAG00000009169) AASDH (ENSPNAG00000009189) cracd (ENSPNAG00000009213) cep135 (ENSPNAG00000009261) chst14 (ENSPNAG00000004696) exoc1 (ENSPNAG00000001314) nmu (ENSPNAG00000009468) #16 clocka (ENSPNAG00000009579) #18 tmem165 (ENSPNAG00000009607) #20 srd5a3 (ENSPNAG00000009614) #21 kdr (ENSPNAG00000009632) #22 kita (ENSPNAG00000009655) pdgfra (ENSPNAG00000006989) ENSPNAG00000009786 gsx2 (ENSPNAG00000009791) lnx1 (ENSPNAG00000009829) ENSPNAG00000009853 scfd2 (ENSPNAG00000009871) rasl11b (ENSPNAG00000001348) usp46 (ENSPNAG00000009931) spata18 (ENSPNAG00000005012) sgcb (ENSPNAG00000009982) ENSPNAG00000009987 dcun1d4 (ENSPNAG00000010034) ociad2 (ENSPNAG00000010069) ociad1 (ENSPNAG00000010095) Mexicana tetra MODERN SPECIES 18 ENSAMXG00000034398 ENSAMXG00000005402 paics (ENSAMXG00000005419) ppat (ENSAMXG00000005442) si:dkeyp-117h8.4 (ENSAMXG00000029857) AASDH (ENSAMXG00000035822) cracd (ENSAMXG00000005490) cep135 (ENSAMXG00000005502) chst14 (ENSAMXG00000038910) exoc1 (ENSAMXG00000005542) nmu (ENSAMXG00000031528) #16 clocka (ENSAMXG00000005565) #18 ENSAMXG00000034679 tmem165 (ENSAMXG00000002811) #20 srd5a3 (ENSAMXG00000031728) #21 kdr (ENSAMXG00000043598) #22 kita (ENSAMXG00000002687) pdgfra (ENSAMXG00000002629) ENSAMXG00000036677 gsx2 (ENSAMXG00000041308) lnx1 (ENSAMXG00000002610) ENSAMXG00000031045 ENSAMXG00000033362 scfd2 (ENSAMXG00000002603) rasl11b (ENSAMXG00000042814) usp46 (ENSAMXG00000002600) spata18 (ENSAMXG00000040413) sgcb (ENSAMXG00000002583) ENSAMXG00000038151 dcun1d4 (ENSAMXG00000002575) ociad2 (ENSAMXG00000040066) Electric eel MODERN SPECIES 498 ENSEEEG00000018872 ENSEEEG00000018875 ENSEEEG00000018902 paics (ENSEEEG00000019166) ppat (ENSEEEG00000019228) ENSEEEG00000019234 si:dkeyp-117h8.4 (ENSEEEG00000019236) AASDH (ENSEEEG00000019240) ENSEEEG00000019246 cep135 (ENSEEEG00000019248) chst14 (ENSEEEG00000019255) exoc1 (ENSEEEG00000019259) clocka (ENSEEEG00000019263) #18 tmem165 (ENSEEEG00000019265) #20 srd5a3 (ENSEEEG00000019266) #21 kdr (ENSEEEG00000019294) #22 kita (ENSEEEG00000019569) pdgfra (ENSEEEG00000019575) ENSEEEG00000019608 ENSEEEG00000019609 gsx2 (ENSEEEG00000019610) Cyprinoidei ANCESTRAL SPECIES 11 ENSGT00950000182772.A.a.b.`b.b ENSGT00930000151053 ENSGT00940000163503.A.a.b ENSGT00940000155720.c.a ENSGT00390000010349.a.a.a.b ENSGT00940000154045.b ENSGT00940000164854.b.f ENSGT00940000156116.B ENSGT00940000154656.ob.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000175494 ENSGT00940000156043 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00980000203285 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b Zebrafish MODERN SPECIES 12 ppp1r13bb (ENSDARG00000009142) ckbb (ENSDARG00000043257) xrcc3 (ENSDARG00000017928) brf1b (ENSDARG00000005002) btbd6b (ENSDARG00000032369) ENSDARG00000094224 nudt14 (ENSDARG00000062335) jag2b (ENSDARG00000021389) esr2a (ENSDARG00000016454) syne2a (ENSDARG00000030107) daam1b (ENSDARG00000009689) nmu (ENSDARG00000043299) #16 clocka (ENSDARG00000011703) #18 tmem165 (ENSDARG00000034600) #20 srd5a3 (ENSDARG00000043307) #21 kdr (ENSDARG00000017321) #22 kita (ENSDARG00000043317) pdgfra (ENSDARG00000070494) gsx2 (ENSDARG00000043322) lnx1 (ENSDARG00000043323) ENSDARG00000043328 scfd2 (ENSDARG00000040005) ENSDARG00000115492 ENSDARG00000093336 rasl11b (ENSDARG00000015611) usp46 (ENSDARG00000045343) spata18 (ENSDARG00000052343) sgcb (ENSDARG00000052341) ENSDARG00000093370 dcun1d4 (ENSDARG00000092394) ociad2 (ENSDARG00000052336) Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000156710.y #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000156710.y #22 Golden-line barbel MODERN SPECIES 3659 ENSSGRG00000002561 #22 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 121 ENSGT00950000182772.A.a.b.`b.b.i ENSGT00930000151053 ENSGT00940000155720.c.a.d ENSGT00390000010349.a.a.a.b.b ENSGT00940000154045.b.e.a ENSGT00940000164854.b.f.a.a.b ENSGT00940000156116.B.b ENSGT00940000154656.ob.b.d ENSGT00950000182996.b.a.a.b.d.a.f.b.b.a ENSGT00390000002032 ENSGT00940000156452.a.a.c ENSGT00510000048726.c #16 ENSGT00940000157580.a.a.a #18 ENSGT00390000005261.c.b #20 ENSGT00500000044920.d #21 ENSGT00940000156710.z.a #22 ENSGT00940000155626.ld.a.b ENSGT00940000156021.h.a ENSGT00940000156043.hc ENSGT00940000158757.j ENSGT00940000162578.sc.b.a ENSGT00390000011192.vb.a ENSGT00940000158643.c Cyprininae_a ANCESTRAL SPECIES 407 ENSGT00940000156116.B.b ENSGT00940000154656.ob.b.d ENSGT00950000182996.b.a.a.b.d.a.f.b.b.a ENSGT00390000002032 ENSGT00940000156452.a.a.c ENSGT00510000048726.c #16 ENSGT00940000157580.a.a.a #18 ENSGT00390000005261.c.b #20 ENSGT00500000044920.d #21 ENSGT00940000156710.z.a #22 ENSGT00940000155626.ld.a.b ENSGT00940000156021.h.a ENSGT00940000156043.hc ENSGT00940000158757.j ENSGT00940000162578.sc.b.a ENSGT00390000011192.vb.a ENSGT00940000158643.c ENSGT00940000153284.b.x ENSGT00390000008110.c ENSGT00980000203285 ENSGT00940000156935.o.b ENSGT00530000063690.a.b.a.b.l ENSGT00530000063690.a.a.t.c.b Common carp reference MODERN SPECIES 34 btbd6b (ENSCCRG00000024293) ENSCCRG00000024274 nudt14 (ENSCCRG00000074497) jag2b (ENSCCRG00000007251) esr2a (ENSCCRG00000006684) ENSCCRG00000066797 ENSCCRG00000002648 ENSCCRG00000033523 ENSCCRG00000062727 daam1b (ENSCCRG00000033411) nmu (ENSCCRG00000001225) #16 ENSCCRG00000075492 clocka (ENSCCRG00000003591) #18 tmem165 (ENSCCRG00000064973) #20 srd5a3 (ENSCCRG00000022915) #21 kdr (ENSCCRG00000022891) #22 kita (ENSCCRG00000038896) pdgfra (ENSCCRG00000037125) gsx2 (ENSCCRG00000038849) lnx1 (ENSCCRG00000008890) ENSCCRG00000064573 rasl11b (ENSCCRG00000005928) SCFD2 (ENSCCRG00000017641) usp46 (ENSCCRG00000034058) spata18 (ENSCCRG00000034049) sgcb (ENSCCRG00000077383) ENSCCRG00000034033 dcun1d4 (ENSCCRG00000034028) ociad2 (ENSCCRG00000034017) ociad1 (ENSCCRG00000079949) fryl (ENSCCRG00000033998) Golden-line barbel MODERN SPECIES 313 nudt14 (ENSSGRG00000020220) jag2b (ENSSGRG00000019713) ENSSGRG00000019687 ENSSGRG00000019686 pimr151 (ENSSGRG00000019675) L3HYPDH (ENSSGRG00000019674) daam1b (ENSSGRG00000018490) nmu (ENSSGRG00000018460) #16 clocka (ENSSGRG00000016772) #18 tmem165 (ENSSGRG00000016741) #20 srd5a3 (ENSSGRG00000016740) #21 kdr (ENSSGRG00000016731) #22 kita (ENSSGRG00000015937) pdgfra (ENSSGRG00000015380) gsx2 (ENSSGRG00000015369) lnx1 (ENSSGRG00000015310) ENSSGRG00000015308 SCFD2 (ENSSGRG00000015304) Goldfish DUPLICATION Goldfish MODERN SPECIES 12 spata18 (ENSCARG00000052868) sgcb (ENSCARG00000052785) ENSCARG00000052740 dcun1d4 (ENSCARG00000052659) ociad2 (ENSCARG00000052643) ociad1 (ENSCARG00000052634) fryl (ENSCARG00000052352) esr2a (ENSCARG00000052187) ENSCARG00000052145 ENSCARG00000052095 L3HYPDH (ENSCARG00000052080) daam1b (ENSCARG00000051851) nmu (ENSCARG00000051614) #16 clocka (ENSCARG00000050592) #18 tmem165 (ENSCARG00000050481) #20 kdr (ENSCARG00000050175) #22 kita (ENSCARG00000049128) pdgfra (ENSCARG00000045218) gsx2 (ENSCARG00000044940) epha7 (ENSCARG00000044897) moxd1 (ENSCARG00000044800) ccn2a (ENSCARG00000044706) fam228a (ENSCARG00000044687) itsn2a (ENSCARG00000044409) mrpl19 (ENSCARG00000044349) pfas (ENSCARG00000044233) ENSCARG00000044189 hook1 (ENSCARG00000041394) cyp2ad6 (ENSCARG00000041143) cyp2ad2 (ENSCARG00000041032) cyp2ad3 (ENSCARG00000040944) Goldfish MODERN SPECIES 234 kdr (ENSCARG00000058146) #22 Cyprininae ANCESTRAL SPECIES 101 ENSGT00940000153463.a.c.b.b ENSGT00950000182772.A.a.b.`b.b.j ENSGT00390000010349.a.a.a.b.a ENSGT00940000163503.A.a.b ENSGT00940000155720.c.a.c ENSGT00390000010349.a.a.b ENSGT00940000166988 ENSGT00940000164854.b.f.b ENSGT00940000156116.B.a ENSGT00940000154656.ob.b.c.b ENSGT00940000156452.a.a.d ENSGT00510000048726.d #16 ENSGT00940000157580.a.a.b #18 ENSGT00390000005261.d #20 ENSGT00500000044920.c #21 ENSGT00940000156710.z.b #22 ENSGT00940000155626.ld.a.a ENSGT00940000156021.h.b ENSGT00940000175494 ENSGT00940000156043.ic ENSGT00940000158757.i ENSGT00940000162578.sc.b.b ENSGT00390000011192.wb ENSGT00940000158643.d ENSGT00940000153284.b.w.b ENSGT00940000153284.b.w.a ENSGT00390000013532 ENSGT00390000008110.d ENSGT00940000156935.o.a.a ENSGT00390000014817 ENSGT00940000156935.p Goldfish MODERN SPECIES 39 jag2b (ENSCARG00000022626) esr2a (ENSCARG00000022578) ENSCARG00000022566 ENSCARG00000022559 ENSCARG00000022554 ENSCARG00000022546 ENSCARG00000022542 ENSCARG00000022534 ENSCARG00000022530 ENSCARG00000022525 daam1b (ENSCARG00000022457) nmu (ENSCARG00000022117) #16 clocka (ENSCARG00000019991) #18 tmem165 (ENSCARG00000019914) #20 srd5a3 (ENSCARG00000019904) #21 kdr (ENSCARG00000019566) #22 kita (ENSCARG00000017223) pdgfra (ENSCARG00000016648) gsx2 (ENSCARG00000016582) lnx1 (ENSCARG00000016553) ENSCARG00000016514 SCFD2 (ENSCARG00000016491) rasl11b (ENSCARG00000016476) ENSCARG00000016472 usp46 (ENSCARG00000016391) sgcb (ENSCARG00000016371) dcun1d4 (ENSCARG00000016357) ociad2 (ENSCARG00000016348) ENSCARG00000016334 fryl (ENSCARG00000015858) ccm2 (ENSCARG00000015784) Cyprininae_a ANCESTRAL SPECIES 34 ENSGT00940000153463.a.c.b.b ENSGT00950000182772.A.a.b.`b.b.j ENSGT00390000010349.a.a.a.b.a ENSGT00940000163503.A.a.b ENSGT00940000155720.c.a.c ENSGT00390000010349.a.a.b ENSGT00940000166988 ENSGT00940000164854.b.f.b ENSGT00940000156116.B.a ENSGT00940000154656.ob.b.c.a ENSGT00940000156452.a.a.d ENSGT00510000048726.d #16 ENSGT00940000157580.a.a.b #18 ENSGT00390000005261.d #20 ENSGT00500000044920.c #21 ENSGT00940000156710.z.b #22 ENSGT00940000155626.ld.a.a ENSGT00940000156021.h.b ENSGT00940000175494 ENSGT00940000156043.ic ENSGT00940000158757.i ENSGT00940000162578.sc.b.b ENSGT00390000011192.wb ENSGT00940000158643.d ENSGT00940000153284.b.w.b ENSGT00940000153284.b.w.a ENSGT00390000013532 ENSGT00390000008110.d ENSGT00390000014817 ENSGT00940000156935.p ENSGT00530000063690.a.b.a.b.k Common carp reference MODERN SPECIES 28 ENSCCRG00000030004 ENSCCRG00000030013 btbd6b (ENSCCRG00000030019) nudt14 (ENSCCRG00000076961) ENSCCRG00000055228 jag2b (ENSCCRG00000022420) esr2a (ENSCCRG00000021944) ENSCCRG00000009170 ENSCCRG00000076845 ENSCCRG00000065747 ENSCCRG00000070276 daam1b (ENSCCRG00000036171) nmu (ENSCCRG00000015667) #16 clocka (ENSCCRG00000023096) #18 tmem165 (ENSCCRG00000003531) #20 kdr (ENSCCRG00000033392) #22 srd5a3 (ENSCCRG00000003520) #21 kita (ENSCCRG00000031619) pdgfra (ENSCCRG00000033797) gsx2 (ENSCCRG00000072413) lnx1 (ENSCCRG00000016556) ENSCCRG00000039407 SCFD2 (ENSCCRG00000039417) rasl11b (ENSCCRG00000065537) usp46 (ENSCCRG00000070413) ENSCCRG00000072074 dcun1d4 (ENSCCRG00000008818) ociad2 (ENSCCRG00000076431) ociad1 (ENSCCRG00000042678) fryl (ENSCCRG00000033884) zar1 (ENSCCRG00000033869) Golden-line barbel MODERN SPECIES 2032 clocka (ENSSGRG00000008210) #18 tmem165 (ENSSGRG00000008212) #20 srd5a3 (ENSSGRG00000008215) #21 kdr (ENSSGRG00000008216) #22 Clupeiformes ANCESTRAL SPECIES 9 ENSGT00940000166379 ENSGT00940000157990.a.b ENSGT00390000010172 ENSGT00390000003428 ENSGT00980000199199 ENSGT00440000033811 ENSGT00940000161471 ENSGT00940000165649 ENSGT00940000162640 ENSGT00940000158640 ENSGT00940000176973 ENSGT00510000048726 #16 ENSGT00940000157580.a.a #18 ENSGT00390000005261 #20 ENSGT00500000044920 #21 ENSGT00940000156710 #22 ENSGT00940000155626 ENSGT00940000156021 ENSGT00940000158757 ENSGT00940000162578 ENSGT00390000011192 ENSGT00940000158643 ENSGT00940000153284.b ENSGT00390000013532 ENSGT00390000008110 ENSGT00390000014817 ENSGT00940000156935 ENSGT00530000063690.a.b.a.b ENSGT00610000086058.a ENSGT00390000012305.a ENSGT00950000182808.a.a.b.b Denticle herring MODERN SPECIES 4 nrl (ENSDCDG00000023077) ENSDCDG00000023086 paics (ENSDCDG00000023101) ppat (ENSDCDG00000023425) ENSDCDG00000023467 AASDH (ENSDCDG00000023475) cracd (ENSDCDG00000023487) ENSDCDG00000023493 cep135 (ENSDCDG00000023507) chst14 (ENSDCDG00000023546) exoc1 (ENSDCDG00000023605) ENSDCDG00000024963 clocka (ENSDCDG00000024980) #18 tmem165 (ENSDCDG00000025558) #20 srd5a3 (ENSDCDG00000025563) #21 kdr (ENSDCDG00000025607) #22 kita (ENSDCDG00000025735) pdgfra (ENSDCDG00000026299) ENSDCDG00000028376 ENSDCDG00000028377 lnx1 (ENSDCDG00000028381) ENSDCDG00000028384 SCFD2 (ENSDCDG00000028385) rasl11b (ENSDCDG00000028386) usp46 (ENSDCDG00000028394) spata18 (ENSDCDG00000028463) sgcb (ENSDCDG00000028474) ENSDCDG00000028478 dcun1d4 (ENSDCDG00000028490) ENSDCDG00000028551 ENSDCDG00000028847 Atlantic herring MODERN SPECIES 1 nfil3-4 (ENSCHAG00000012990) ENSCHAG00000012981 nrl (ENSCHAG00000012948) ENSCHAG00000012694 paics (ENSCHAG00000012232) ppat (ENSCHAG00000012106) ENSCHAG00000012064 AASDH (ENSCHAG00000012033) cracd (ENSCHAG00000011979) cep135 (ENSCHAG00000011936) chst14 (ENSCHAG00000011922) exoc1 (ENSCHAG00000011687) nmu (ENSCHAG00000011664) #16 tmem165 (ENSCHAG00000011640) #20 srd5a3 (ENSCHAG00000011636) #21 kdr (ENSCHAG00000010465) #22 clocka (ENSCHAG00000007302) #18 kita (ENSCHAG00000006618) pdgfra (ENSCHAG00000001576) ENSCHAG00000001249 gsx2 (ENSCHAG00000001217) lnx1 (ENSCHAG00000001104) ENSCHAG00000001041 scfd2 (ENSCHAG00000000822) rasl11b (ENSCHAG00000000664) usp46 (ENSCHAG00000025013) spata18 (ENSCHAG00000025006) sgcb (ENSCHAG00000024997) ENSCHAG00000024991 dcun1d4 (ENSCHAG00000024952) ociad2 (ENSCHAG00000024945)