Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00900000143551	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00510000049338	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36
Rodentia_B	ANCESTRAL SPECIES	42	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Myomorpha	ANCESTRAL SPECIES	51	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Muroidea	ANCESTRAL SPECIES	58	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	850																Carm1 (ENSNGAG00000001362) #22	Yipf2 (ENSNGAG00000010607) #23	Timm29 (ENSNGAG00000016810) #24	Smarca4 (ENSNGAG00000021852) #25	Ldlr (ENSNGAG00000018614) #26	Spc24 (ENSNGAG00000005326) #27	ENSNGAG00000001359 #28	Dock6 (ENSNGAG00000004348) #29	Angptl8 (ENSNGAG00000016227) #30	Rab3d (ENSNGAG00000016962) #31	Tmem205 (ENSNGAG00000017217) #32	Ccdc159 (ENSNGAG00000017828) #33	Plppr2 (ENSNGAG00000012541) #34	ENSNGAG00000013744 #35	Epor (ENSNGAG00000014154) #36	Rgl3 (ENSNGAG00000015700) #37
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Northern American deer mouse	MODERN SPECIES	20	Tyk2 (ENSPEMG00000011071)	Cdc37 (ENSPEMG00000023710)	Pde4a (ENSPEMG00000023071)	Keap1 (ENSPEMG00000022907)	S1pr5 (ENSPEMG00000015460)	Atg4d (ENSPEMG00000004633)	Kri1 (ENSPEMG00000024201)	Cdkn2d (ENSPEMG00000030087)	Ap1m2 (ENSPEMG00000023352)	Slc44a2 (ENSPEMG00000008320)	ENSPEMG00000000465	Qtrt1 (ENSPEMG00000009897)	Dnm2 (ENSPEMG00000022844)	Tmed1 (ENSPEMG00000014342)	AB124611 (ENSPEMG00000011218)	Carm1 (ENSPEMG00000023286) #22	Yipf2 (ENSPEMG00000022941) #23	Timm29 (ENSPEMG00000031004) #24	Smarca4 (ENSPEMG00000020389) #25	Ldlr (ENSPEMG00000021260) #26	Spc24 (ENSPEMG00000009453) #27	Kank2 (ENSPEMG00000000736) #28	Dock6 (ENSPEMG00000010133) #29	Angptl8 (ENSPEMG00000015174) #30	ENSPEMG00000014770	Rab3d (ENSPEMG00000031189) #31	Tmem205 (ENSPEMG00000020320) #32	Ccdc159 (ENSPEMG00000014545) #33	Plppr2 (ENSPEMG00000020521) #34	Swsap1 (ENSPEMG00000017184) #35	Epor (ENSPEMG00000020463) #36
Prairie vole	MODERN SPECIES	13	Tyk2 (ENSMOCG00000017994)	Cdc37 (ENSMOCG00000020700)	Pde4a (ENSMOCG00000007095)	Keap1 (ENSMOCG00000009445)	S1pr5 (ENSMOCG00000005836)	Atg4d (ENSMOCG00000002959)	Kri1 (ENSMOCG00000017013)	Cdkn2d (ENSMOCG00000016257)	Ap1m2 (ENSMOCG00000000638)	Slc44a2 (ENSMOCG00000014267)	Ilf3 (ENSMOCG00000018740)	Qtrt1 (ENSMOCG00000019584)	Dnm2 (ENSMOCG00000018580)	Tmed1 (ENSMOCG00000007785)	AB124611 (ENSMOCG00000014256)	Carm1 (ENSMOCG00000004215) #22	Yipf2 (ENSMOCG00000017806) #23	ENSMOCG00000019898 #24	Smarca4 (ENSMOCG00000022209) #25	Ldlr (ENSMOCG00000016718) #26	Spc24 (ENSMOCG00000023025) #27	Kank2 (ENSMOCG00000008426) #28	Dock6 (ENSMOCG00000015812) #29	Angptl8 (ENSMOCG00000022983) #30	Rab3d (ENSMOCG00000002683) #31	Tmem205 (ENSMOCG00000003259) #32	Ccdc159 (ENSMOCG00000010436) #33	Plppr2 (ENSMOCG00000011755) #34	Swsap1 (ENSMOCG00000010976) #35	Epor (ENSMOCG00000013170) #36	Rgl3 (ENSMOCG00000014876) #37
Cricetinae	ANCESTRAL SPECIES	30	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Chinese hamster chok1gshd	MODERN SPECIES	189	Tyk2 (ENSCGRG00001016315)	ENSCGRG00001017764	Pde4a (ENSCGRG00001014442)	Keap1 (ENSCGRG00001016562)	S1pr5 (ENSCGRG00001009679)	Atg4d (ENSCGRG00001017644)	Kri1 (ENSCGRG00001018764)	Cdkn2d (ENSCGRG00001019561)	Ap1m2 (ENSCGRG00001020691)	Slc44a2 (ENSCGRG00001014087)	Ilf3 (ENSCGRG00001021577)	Qtrt1 (ENSCGRG00001001152)	Dnm2 (ENSCGRG00001015804)	Tmed1 (ENSCGRG00001018097)	AB124611 (ENSCGRG00001019412)	Carm1 (ENSCGRG00001023212) #22	Yipf2 (ENSCGRG00001005089) #23	Timm29 (ENSCGRG00001007273) #24	Smarca4 (ENSCGRG00001016732) #25	Ldlr (ENSCGRG00001014331) #26	Spc24 (ENSCGRG00001015236) #27	Kank2 (ENSCGRG00001019422) #28	Dock6 (ENSCGRG00001024445) #29	Angptl8 (ENSCGRG00001017874) #30	Rab3d (ENSCGRG00001019307) #31	Tmem205 (ENSCGRG00001022126) #32	Ccdc159 (ENSCGRG00001023310) #33	Plppr2 (ENSCGRG00001018956) #34	Swsap1 (ENSCGRG00001003241) #35	Epor (ENSCGRG00001009147) #36	Rgl3 (ENSCGRG00001012320) #37
Golden Hamster	MODERN SPECIES	700	Tyk2 (ENSMAUG00000017865)	Cdc37 (ENSMAUG00000008486)	Pde4a (ENSMAUG00000013828)	Keap1 (ENSMAUG00000007914)	S1pr5 (ENSMAUG00000000259)	Atg4d (ENSMAUG00000020205)	Kri1 (ENSMAUG00000011484)	Cdkn2d (ENSMAUG00000001161)	Ap1m2 (ENSMAUG00000012894)	Slc44a2 (ENSMAUG00000010847)	Ilf3 (ENSMAUG00000020405)	Qtrt1 (ENSMAUG00000020794)	ENSMAUG00000019307	ENSMAUG00000013381	Tmed1 (ENSMAUG00000008835)	Carm1 (ENSMAUG00000020443) #22	Yipf2 (ENSMAUG00000019367) #23	Timm29 (ENSMAUG00000016236) #24	Smarca4 (ENSMAUG00000020731) #25	Ldlr (ENSMAUG00000018237) #26	Spc24 (ENSMAUG00000016753) #27	Kank2 (ENSMAUG00000011226) #28	Angptl8 (ENSMAUG00000014435) #30	Dock6 (ENSMAUG00000020369) #29	Rab3d (ENSMAUG00000011273) #31	Ccdc159 (ENSMAUG00000002172) #33	Plppr2 (ENSMAUG00000012058) #34	Swsap1 (ENSMAUG00000018796) #35	Epor (ENSMAUG00000015533) #36	Rgl3 (ENSMAUG00000015321) #37	Odad3 (ENSMAUG00000003747)
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Mus	ANCESTRAL SPECIES	4	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36	ENSGT00940000161935 #37
spretus	MODERN SPECIES	18	Tyk2 (MGP_SPRETEiJ_G0032985)	Cdc37 (MGP_SPRETEiJ_G0032986)	Pde4a (MGP_SPRETEiJ_G0032987)	Keap1 (MGP_SPRETEiJ_G0032988)	S1pr5 (MGP_SPRETEiJ_G0032989)	Atg4d (MGP_SPRETEiJ_G0032990)	Kri1 (MGP_SPRETEiJ_G0032991)	Cdkn2d (MGP_SPRETEiJ_G0032992)	Ap1m2 (MGP_SPRETEiJ_G0032993)	Slc44a2 (MGP_SPRETEiJ_G0032994)	Ilf3 (MGP_SPRETEiJ_G0032995)	Qtrt1 (MGP_SPRETEiJ_G0032996)	Dnm2 (MGP_SPRETEiJ_G0032997)	Tmed1 (MGP_SPRETEiJ_G0032998)	AB124611 (MGP_SPRETEiJ_G0032999)	Carm1 (MGP_SPRETEiJ_G0033000) #22	Yipf2 (MGP_SPRETEiJ_G0033001) #23	Timm29 (MGP_SPRETEiJ_G0033002) #24	Smarca4 (MGP_SPRETEiJ_G0033003) #25	Ldlr (MGP_SPRETEiJ_G0033004) #26	Spc24 (MGP_SPRETEiJ_G0033005) #27	Kank2 (MGP_SPRETEiJ_G0033006) #28	Dock6 (MGP_SPRETEiJ_G0033007) #29	Angptl8 (MGP_SPRETEiJ_G0033008) #30	Rab3d (MGP_SPRETEiJ_G0033009) #31	Tmem205 (MGP_SPRETEiJ_G0033010) #32	Ccdc159 (MGP_SPRETEiJ_G0033011) #33	Plppr2 (MGP_SPRETEiJ_G0033012) #34	Epor (MGP_SPRETEiJ_G0033013) #36	Rgl3 (MGP_SPRETEiJ_G0033014) #37	Odad3 (MGP_SPRETEiJ_G0033015)
Steppe mouse	MODERN SPECIES	3115	Cdc37 (ENSMSIG00000016922)	Pde4a (ENSMSIG00000016751)	Keap1 (ENSMSIG00000016713)	S1pr5 (ENSMSIG00000016710)	Atg4d (ENSMSIG00000016653)	Kri1 (ENSMSIG00000016603)	Cdkn2d (ENSMSIG00000016582)	Ap1m2 (ENSMSIG00000016529)	Slc44a2 (ENSMSIG00000016395)	Ilf3 (ENSMSIG00000016302)	Qtrt1 (ENSMSIG00000016262)	Dnm2 (ENSMSIG00000015982)	Tmed1 (ENSMSIG00000015965)	AB124611 (ENSMSIG00000015890)	Yipf2 (ENSMSIG00000015831) #23	Carm1 (ENSMSIG00000015744) #22	Smarca4 (ENSMSIG00000015575) #25	Ldlr (ENSMSIG00000015469) #26	Spc24 (ENSMSIG00000015419) #27	Kank2 (ENSMSIG00000015384) #28	Angptl8 (ENSMSIG00000015367) #30	Dock6 (ENSMSIG00000015052) #29	Rab3d (ENSMSIG00000014980) #31	ENSMSIG00000014964 #32	Ccdc159 (ENSMSIG00000014895) #33	Plppr2 (ENSMSIG00000014788) #34	Swsap1 (ENSMSIG00000014781) #35	ENSMSIG00000014716 #36	ENSMSIG00000013921 #37	Odad3 (ENSMSIG00000013901)	Prkcsh (ENSMSIG00000013805)
Mouse	MODERN SPECIES	18	Tyk2 (ENSMUSG00000032175)	Cdc37 (ENSMUSG00000019471)	Pde4a (ENSMUSG00000032177)	Keap1 (ENSMUSG00000003308)	S1pr5 (ENSMUSG00000045087)	Atg4d (ENSMUSG00000002820)	Kri1 (ENSMUSG00000035047)	Cdkn2d (ENSMUSG00000096472)	Ap1m2 (ENSMUSG00000003309)	Slc44a2 (ENSMUSG00000057193)	Ilf3 (ENSMUSG00000032178)	Qtrt1 (ENSMUSG00000002825)	Dnm2 (ENSMUSG00000033335)	Tmed1 (ENSMUSG00000032180)	AB124611 (ENSMUSG00000057191)	Carm1 (ENSMUSG00000032185) #22	Yipf2 (ENSMUSG00000032182) #23	Timm29 (ENSMUSG00000048429) #24	Smarca4 (ENSMUSG00000032187) #25	Ldlr (ENSMUSG00000032193) #26	Spc24 (ENSMUSG00000074476) #27	Kank2 (ENSMUSG00000032194) #28	Dock6 (ENSMUSG00000032198) #29	Angptl8 (ENSMUSG00000047822) #30	Rab3d (ENSMUSG00000019066) #31	Tmem205 (ENSMUSG00000040883) #32	Ccdc159 (ENSMUSG00000006241) #33	Plppr2 (ENSMUSG00000040563) #34	Swsap1 (ENSMUSG00000051238) #35	Epor (ENSMUSG00000006235) #36	Rgl3 (ENSMUSG00000040146) #37
Ryukyu mouse	MODERN SPECIES	18	Tyk2 (MGP_CAROLIEiJ_G0031861)	Cdc37 (MGP_CAROLIEiJ_G0031862)	Pde4a (MGP_CAROLIEiJ_G0031863)	Keap1 (MGP_CAROLIEiJ_G0031864)	S1pr5 (MGP_CAROLIEiJ_G0031865)	Atg4d (MGP_CAROLIEiJ_G0031866)	Kri1 (MGP_CAROLIEiJ_G0031867)	Cdkn2d (MGP_CAROLIEiJ_G0031868)	Ap1m2 (MGP_CAROLIEiJ_G0031869)	Slc44a2 (MGP_CAROLIEiJ_G0031870)	Ilf3 (MGP_CAROLIEiJ_G0031871)	Qtrt1 (MGP_CAROLIEiJ_G0031872)	Dnm2 (MGP_CAROLIEiJ_G0031873)	Tmed1 (MGP_CAROLIEiJ_G0031874)	AB124611 (MGP_CAROLIEiJ_G0031875)	Carm1 (MGP_CAROLIEiJ_G0031876) #22	Yipf2 (MGP_CAROLIEiJ_G0031877) #23	Timm29 (MGP_CAROLIEiJ_G0031878) #24	Smarca4 (MGP_CAROLIEiJ_G0031879) #25	Ldlr (MGP_CAROLIEiJ_G0031880) #26	Spc24 (MGP_CAROLIEiJ_G0031881) #27	Kank2 (MGP_CAROLIEiJ_G0031882) #28	MGP_CAROLIEiJ_G0031883 #29	Angptl8 (MGP_CAROLIEiJ_G0031884) #30	Rab3d (MGP_CAROLIEiJ_G0031885) #31	Tmem205 (MGP_CAROLIEiJ_G0031886) #32	Ccdc159 (MGP_CAROLIEiJ_G0031887) #33	Plppr2 (MGP_CAROLIEiJ_G0031888) #34	Swsap1 (MGP_CAROLIEiJ_G0031889) #35	Epor (MGP_CAROLIEiJ_G0031890) #36	Rgl3 (MGP_CAROLIEiJ_G0031891) #37
Shrew mouse	MODERN SPECIES	1	Tyk2 (MGP_PahariEiJ_G0014727)	Cdc37 (MGP_PahariEiJ_G0014728)	Pde4a (MGP_PahariEiJ_G0014729)	Keap1 (MGP_PahariEiJ_G0014730)	S1pr5 (MGP_PahariEiJ_G0014731)	Atg4d (MGP_PahariEiJ_G0014732)	Kri1 (MGP_PahariEiJ_G0014733)	Cdkn2d (MGP_PahariEiJ_G0014734)	Ap1m2 (MGP_PahariEiJ_G0014735)	Slc44a2 (MGP_PahariEiJ_G0014736)	Ilf3 (MGP_PahariEiJ_G0014737)	Qtrt1 (MGP_PahariEiJ_G0014738)	Dnm2 (MGP_PahariEiJ_G0014739)	Tmed1 (MGP_PahariEiJ_G0014740)	AB124611 (MGP_PahariEiJ_G0014741)	Carm1 (MGP_PahariEiJ_G0014742) #22	Yipf2 (MGP_PahariEiJ_G0014743) #23	Timm29 (MGP_PahariEiJ_G0014744) #24	Smarca4 (MGP_PahariEiJ_G0014745) #25	Ldlr (MGP_PahariEiJ_G0014746) #26	MGP_PahariEiJ_G0014747 #27	Kank2 (MGP_PahariEiJ_G0014748) #28	Dock6 (MGP_PahariEiJ_G0014749) #29	Angptl8 (MGP_PahariEiJ_G0014750) #30	Rab3d (MGP_PahariEiJ_G0014751) #31	Tmem205 (MGP_PahariEiJ_G0014752) #32	Ccdc159 (MGP_PahariEiJ_G0014753) #33	Plppr2 (MGP_PahariEiJ_G0014754) #34	Swsap1 (MGP_PahariEiJ_G0014755) #35	Epor (MGP_PahariEiJ_G0014756) #36	Rgl3 (MGP_PahariEiJ_G0014757) #37
Rat	MODERN SPECIES	18	Tyk2 (ENSRNOG00000032948)	Cdc37 (ENSRNOG00000033426)	Pde4a (ENSRNOG00000020828)	Keap1 (ENSRNOG00000020878)	S1pr5 (ENSRNOG00000020901)	Atg4d (ENSRNOG00000047625)	Kri1 (ENSRNOG00000057447)	Cdkn2d (ENSRNOG00000064248)	Ap1m2 (ENSRNOG00000043093)	Slc44a2 (ENSRNOG00000031824)	Ilf3 (ENSRNOG00000022741)	Qtrt1 (ENSRNOG00000007158)	Dnm2 (ENSRNOG00000007649)	Tmed1 (ENSRNOG00000008037)	LOC691141 (ENSRNOG00000033256)	Carm1 (ENSRNOG00000031129) #22	Yipf2 (ENSRNOG00000022043) #23	Smarca4 (ENSRNOG00000009271) #25	Ldlr (ENSRNOG00000009946) #26	Spc24 (ENSRNOG00000029862) #27	Kank2 (ENSRNOG00000010643) #28	Dock6 (ENSRNOG00000010652) #29	Angptl8 (ENSRNOG00000011490) #30	Rab3d (ENSRNOG00000011582) #31	Tmem205 (ENSRNOG00000011747) #32	Ccdc159 (ENSRNOG00000011799) #33	Plppr2 (ENSRNOG00000012164) #34	Swsap1 (ENSRNOG00000012604) #35	Epor (ENSRNOG00000012619) #36	Odad3 (ENSRNOG00000013263)	Prkcsh (ENSRNOG00000013360)
Lesser Egyptian jerboa	MODERN SPECIES	143	Tyk2 (ENSJJAG00000020250)	Cdc37 (ENSJJAG00000021223)	Pde4a (ENSJJAG00000022269)	Keap1 (ENSJJAG00000000119)	S1pr5 (ENSJJAG00000013383)	Atg4d (ENSJJAG00000000341)	Kri1 (ENSJJAG00000002972)	Cdkn2d (ENSJJAG00000008566)	Ap1m2 (ENSJJAG00000009862)	Slc44a2 (ENSJJAG00000011453)	ENSJJAG00000013051	Qtrt1 (ENSJJAG00000013307)	Dnm2 (ENSJJAG00000015316)	Tmed1 (ENSJJAG00000018485)	AB124611 (ENSJJAG00000002332)	Carm1 (ENSJJAG00000008047) #22	Yipf2 (ENSJJAG00000010227) #23	Timm29 (ENSJJAG00000010999) #24	Smarca4 (ENSJJAG00000012877) #25	Ldlr (ENSJJAG00000016661) #26	ENSJJAG00000013464	Spc24 (ENSJJAG00000017112) #27	Kank2 (ENSJJAG00000017464) #28	Dock6 (ENSJJAG00000019330) #29	Angptl8 (ENSJJAG00000022577) #30	ENSJJAG00000013629	ENSJJAG00000000215 #31	Tmem205 (ENSJJAG00000000261) #32	Ccdc159 (ENSJJAG00000000427) #33	Plppr2 (ENSJJAG00000001171) #34	Swsap1 (ENSJJAG00000004050) #35
Kangaroo rat	MODERN SPECIES	498	Raver1 (ENSDORG00000010106)	Tyk2 (ENSDORG00000010102)	Cdc37 (ENSDORG00000029470)	Pde4a (ENSDORG00000013594)	Keap1 (ENSDORG00000013598)	ENSDORG00000028548	Atg4d (ENSDORG00000013442)	Kri1 (ENSDORG00000013443)	Ap1m2 (ENSDORG00000013447)	Slc44a2 (ENSDORG00000011152)	Ilf3 (ENSDORG00000015231)	Qtrt1 (ENSDORG00000015233)	Dnm2 (ENSDORG00000015234)	Tmed1 (ENSDORG00000025876)	AB124611 (ENSDORG00000013393)	Carm1 (ENSDORG00000013395) #22	Yipf2 (ENSDORG00000013396) #23	Timm29 (ENSDORG00000013397) #24	Smarca4 (ENSDORG00000002544) #25	Ldlr (ENSDORG00000011310) #26	Spc24 (ENSDORG00000029533) #27	ENSDORG00000023590 #28	Dock6 (ENSDORG00000006851) #29	Angptl8 (ENSDORG00000006854) #30	Rab3d (ENSDORG00000023961) #31	Tmem205 (ENSDORG00000002522) #32	Plppr2 (ENSDORG00000002524) #34	Epor (ENSDORG00000002529) #36	Rgl3 (ENSDORG00000002531) #37	ENSDORG00000002533	Prkcsh (ENSDORG00000002536)
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00900000143551	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00510000049338	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00900000143551	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00510000049338	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36
Eurasian red squirrel	MODERN SPECIES	7	CDC37 (ENSSVLG00005020567)	PDE4A (ENSSVLG00005020638)	KEAP1 (ENSSVLG00005020889)	S1PR5 (ENSSVLG00005020921)	ATG4D (ENSSVLG00005020947)	KRI1 (ENSSVLG00005020995)	CDKN2D (ENSSVLG00005021167)	ENSSVLG00005021219	SLC44A2 (ENSSVLG00005021433)	ENSSVLG00005021542	ILF3 (ENSSVLG00005021649)	QTRT1 (ENSSVLG00005021743)	DNM2 (ENSSVLG00005021854)	TMED1 (ENSSVLG00005022048)	C19orf38 (ENSSVLG00005022088)	CARM1 (ENSSVLG00005022155) #22	YIPF2 (ENSSVLG00005022404) #23	LDLR (ENSSVLG00005023861) #26	SPC24 (ENSSVLG00005024002) #27	KANK2 (ENSSVLG00005024021) #28	DOCK6 (ENSSVLG00005024084) #29	ANGPTL8 (ENSSVLG00005024122) #30	TSPAN16 (ENSSVLG00005024177)	RAB3D (ENSSVLG00005024280) #31	TMEM205 (ENSSVLG00005024312) #32	CCDC159 (ENSSVLG00005024349) #33	PLPPR2 (ENSSVLG00005024405) #34	SWSAP1 (ENSSVLG00005024453) #35	EPOR (ENSSVLG00005024468) #36	RGL3 (ENSSVLG00005024512) #37	ODAD3 (ENSSVLG00005024648)
Marmotini	ANCESTRAL SPECIES	41	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00510000049338	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36
Alpin marmot	MODERN SPECIES	24	TYK2 (ENSMMMG00000017895)	CDC37 (ENSMMMG00000017941)	PDE4A (ENSMMMG00000017967)	KEAP1 (ENSMMMG00000018969)	ENSMMMG00000018981	ATG4D (ENSMMMG00000018985)	KRI1 (ENSMMMG00000019036)	ENSMMMG00000019102	AP1M2 (ENSMMMG00000019106)	SLC44A2 (ENSMMMG00000019127)	ILF3 (ENSMMMG00000019155)	QTRT1 (ENSMMMG00000019561)	DNM2 (ENSMMMG00000019573)	TMED1 (ENSMMMG00000019775)	C19orf38 (ENSMMMG00000019779)	CARM1 (ENSMMMG00000019799) #22	YIPF2 (ENSMMMG00000019805) #23	ENSMMMG00000019820 #24	SMARCA4 (ENSMMMG00000019826) #25	LDLR (ENSMMMG00000019891) #26	SPC24 (ENSMMMG00000019947) #27	KANK2 (ENSMMMG00000019957) #28	DOCK6 (ENSMMMG00000019995) #29	ANGPTL8 (ENSMMMG00000020098) #30	TSPAN16 (ENSMMMG00000020105)	RAB3D (ENSMMMG00000020113) #31	TMEM205 (ENSMMMG00000020116) #32	CCDC159 (ENSMMMG00000020119) #33	PLPPR2 (ENSMMMG00000020126) #34	SWSAP1 (ENSMMMG00000020143) #35	EPOR (ENSMMMG00000020144) #36
Marmotini_b	ANCESTRAL SPECIES	40	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00510000049338	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36
Arctic ground squirrel	MODERN SPECIES	217	TYK2 (ENSUPAG00010001822)	CDC37 (ENSUPAG00010001857)	PDE4A (ENSUPAG00010001873)	KEAP1 (ENSUPAG00010001991)	ENSUPAG00010002004	ATG4D (ENSUPAG00010002014)	KRI1 (ENSUPAG00010002031)	CDKN2D (ENSUPAG00010002067)	AP1M2 (ENSUPAG00010002081)	SLC44A2 (ENSUPAG00010002115)	ILF3 (ENSUPAG00010002202)	QTRT1 (ENSUPAG00010002480)	DNM2 (ENSUPAG00010002497)	TMED1 (ENSUPAG00010003125)	C19orf38 (ENSUPAG00010003139)	CARM1 (ENSUPAG00010003160) #22	YIPF2 (ENSUPAG00010003190) #23	TIMM29 (ENSUPAG00010003216) #24	SMARCA4 (ENSUPAG00010003222) #25	LDLR (ENSUPAG00010003299) #26	SPC24 (ENSUPAG00010003350) #27	KANK2 (ENSUPAG00010003372) #28	DOCK6 (ENSUPAG00010003421) #29	ANGPTL8 (ENSUPAG00010007137) #30	TSPAN16 (ENSUPAG00010007148)	RAB3D (ENSUPAG00010007164) #31	TMEM205 (ENSUPAG00010007186) #32	CCDC159 (ENSUPAG00010007207) #33	PLPPR2 (ENSUPAG00010007227) #34	SWSAP1 (ENSUPAG00010007321) #35	EPOR (ENSUPAG00010007323) #36
Squirrel	MODERN SPECIES	259	TYK2 (ENSSTOG00000003264)	CDC37 (ENSSTOG00000015962)	PDE4A (ENSSTOG00000027947)	KEAP1 (ENSSTOG00000010114)	S1PR5 (ENSSTOG00000024850)	ATG4D (ENSSTOG00000023750)	KRI1 (ENSSTOG00000007660)	ENSSTOG00000023338	AP1M2 (ENSSTOG00000007719)	SLC44A2 (ENSSTOG00000007737)	ILF3 (ENSSTOG00000007786)	QTRT1 (ENSSTOG00000020466)	DNM2 (ENSSTOG00000007826)	TMED1 (ENSSTOG00000023250)	C19orf38 (ENSSTOG00000024893)	CARM1 (ENSSTOG00000007864) #22	YIPF2 (ENSSTOG00000007905) #23	TIMM29 (ENSSTOG00000026705) #24	SMARCA4 (ENSSTOG00000007939) #25	LDLR (ENSSTOG00000007999) #26	SPC24 (ENSSTOG00000008026) #27	KANK2 (ENSSTOG00000008035) #28	DOCK6 (ENSSTOG00000023652) #29	ANGPTL8 (ENSSTOG00000026191) #30	TSPAN16 (ENSSTOG00000002961)	RAB3D (ENSSTOG00000027509) #31	TMEM205 (ENSSTOG00000005779) #32	CCDC159 (ENSSTOG00000005786) #33	PLPPR2 (ENSSTOG00000010119) #34	SWSAP1 (ENSSTOG00000002990) #35	EPOR (ENSSTOG00000002992) #36
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00900000143551	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00510000049338	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36
Naked mole-rat female	MODERN SPECIES	21	PDE4A (ENSHGLG00000015878)	KEAP1 (ENSHGLG00000015222)	S1PR5 (ENSHGLG00000045386)	ATG4D (ENSHGLG00000007086)	KRI1 (ENSHGLG00000015240)	CDKN2D (ENSHGLG00000013311)	AP1M2 (ENSHGLG00000017835)	ENSHGLG00000044071	SLC44A2 (ENSHGLG00000011332)	ENSHGLG00000036847	ENSHGLG00000019494	QTRT1 (ENSHGLG00000018553)	DNM2 (ENSHGLG00000014318)	TMED1 (ENSHGLG00000034031)	C19orf38 (ENSHGLG00000048163)	CARM1 (ENSHGLG00000007754) #22	YIPF2 (ENSHGLG00000005585) #23	TIMM29 (ENSHGLG00000031869) #24	SMARCA4 (ENSHGLG00000010519) #25	LDLR (ENSHGLG00000014530) #26	SPC24 (ENSHGLG00000005561) #27	KANK2 (ENSHGLG00000006720) #28	ENSHGLG00000034129 #30	DOCK6 (ENSHGLG00000009688) #29	TSPAN16 (ENSHGLG00000017884)	RAB3D (ENSHGLG00000015577) #31	TMEM205 (ENSHGLG00000014918) #32	ENSHGLG00000040073 #33	PLPPR2 (ENSHGLG00000015100) #34	SWSAP1 (ENSHGLG00000015941) #35	EPOR (ENSHGLG00000017626) #36
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00510000049338	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36
Guinea pig	MODERN SPECIES	214						ATG4D (ENSCPOG00000010314)	KRI1 (ENSCPOG00000010323)	CDKN2D (ENSCPOG00000035178)	AP1M2 (ENSCPOG00000026213)	SLC44A2 (ENSCPOG00000013720)	ILF3 (ENSCPOG00000013726)	QTRT1 (ENSCPOG00000025300)	DNM2 (ENSCPOG00000002296)	TMED1 (ENSCPOG00000033109)	C19orf38 (ENSCPOG00000025508)	CARM1 (ENSCPOG00000015465) #22	YIPF2 (ENSCPOG00000026134) #23	TIMM29 (ENSCPOG00000031154) #24	SMARCA4 (ENSCPOG00000015549) #25	LDLR (ENSCPOG00000006816) #26	KANK2 (ENSCPOG00000027433) #28	DOCK6 (ENSCPOG00000026620) #29	ANGPTL8 (ENSCPOG00000030760) #30	TSPAN16 (ENSCPOG00000020079)	RAB3D (ENSCPOG00000030555) #31	TMEM205 (ENSCPOG00000026260) #32	ENSCPOG00000005662 #33	PLPPR2 (ENSCPOG00000005664) #34	SWSAP1 (ENSCPOG00000001918) #35	EPOR (ENSCPOG00000004895) #36	RGL3 (ENSCPOG00000009865) #37
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00940000159869	ENSGT00390000013443.c	ENSGT00940000159788.b	ENSGT00940000159543	ENSGT01050000244887.A.a.a.a	ENSGT00530000063000.a.a.b	ENSGT00390000005605	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000158178	ENSGT00940000156719	ENSGT00530000063679.B	ENSGT00940000155764.C	ENSGT00940000158445	ENSGT00390000008862	ENSGT00940000160377 #22	ENSGT00390000010157.b #23	ENSGT00390000018541 #24	ENSGT00940000156887 #25	ENSGT00940000161046 #26	ENSGT00390000005584 #27	ENSGT00940000161012 #28	ENSGT00940000159313 #29	ENSGT00440000034383 #30	ENSGT00510000049338	ENSGT00940000157552 #31	ENSGT00390000016298.a #32	ENSGT00390000008201 #33	ENSGT00940000158145 #34	ENSGT00390000007170 #35	ENSGT00940000160315 #36
Long-tailed chinchilla	MODERN SPECIES	202	TYK2 (ENSCLAG00000013417)	CDC37 (ENSCLAG00000004550)	PDE4A (ENSCLAG00000005445)	KEAP1 (ENSCLAG00000011003)	S1PR5 (ENSCLAG00000011673)	ATG4D (ENSCLAG00000004668)	KRI1 (ENSCLAG00000006582)	CDKN2D (ENSCLAG00000016365)	AP1M2 (ENSCLAG00000015388)	SLC44A2 (ENSCLAG00000017339)	ILF3 (ENSCLAG00000011537)	QTRT1 (ENSCLAG00000009859)	DNM2 (ENSCLAG00000008156)	TMED1 (ENSCLAG00000008870)	C19orf38 (ENSCLAG00000009782)	CARM1 (ENSCLAG00000011012) #22	YIPF2 (ENSCLAG00000011701) #23	TIMM29 (ENSCLAG00000014951) #24	SMARCA4 (ENSCLAG00000011946) #25	LDLR (ENSCLAG00000015453) #26	DOCK6 (ENSCLAG00000015319) #29	ANGPTL8 (ENSCLAG00000007166) #30	TSPAN16 (ENSCLAG00000008629)	RAB3D (ENSCLAG00000007049) #31	TMEM205 (ENSCLAG00000007329) #32	ENSCLAG00000007718 #33	PLPPR2 (ENSCLAG00000008970) #34	SWSAP1 (ENSCLAG00000011027) #35	EPOR (ENSCLAG00000007667) #36	RGL3 (ENSCLAG00000008655) #37	ODAD3 (ENSCLAG00000008412)
Degu	MODERN SPECIES	91	TYK2 (ENSODEG00000016347)	CDC37 (ENSODEG00000016453)	PDE4A (ENSODEG00000016246)	KEAP1 (ENSODEG00000016128)	S1PR5 (ENSODEG00000020555)	ATG4D (ENSODEG00000016344)	KRI1 (ENSODEG00000016083)	CDKN2D (ENSODEG00000016627)	AP1M2 (ENSODEG00000016673)	SLC44A2 (ENSODEG00000016516)	ILF3 (ENSODEG00000015951)	QTRT1 (ENSODEG00000015894)	DNM2 (ENSODEG00000016299)	TMED1 (ENSODEG00000016351)	C19orf38 (ENSODEG00000015704)	CARM1 (ENSODEG00000015950) #22	YIPF2 (ENSODEG00000015957) #23	TIMM29 (ENSODEG00000015866) #24	SMARCA4 (ENSODEG00000017127) #25	LDLR (ENSODEG00000015446) #26	SPC24 (ENSODEG00000016091) #27	KANK2 (ENSODEG00000015842) #28	ANGPTL8 (ENSODEG00000015983) #30	DOCK6 (ENSODEG00000016301) #29	ENSODEG00000015574 #31	TMEM205 (ENSODEG00000016141) #32	ENSODEG00000015784 #33	PLPPR2 (ENSODEG00000018491) #34	SWSAP1 (ENSODEG00000015882) #35	EPOR (ENSODEG00000015732) #36	RGL3 (ENSODEG00000015605) #37