Euarchontoglires_A ANCESTRAL SPECIES 20 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00900000143551 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Glires ANCESTRAL SPECIES 21 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00900000143551 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Rodentia ANCESTRAL SPECIES 17 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00900000143551 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Rodentia_B ANCESTRAL SPECIES 42 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Myomorpha ANCESTRAL SPECIES 51 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Muroidea ANCESTRAL SPECIES 58 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Muroidea_A ANCESTRAL SPECIES 23 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Murinae ANCESTRAL SPECIES 3 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Mus ANCESTRAL SPECIES 4 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Mus_A ANCESTRAL SPECIES 4 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Mus_B ANCESTRAL SPECIES 3 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Mus_C ANCESTRAL SPECIES 8 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Steppe mouse MODERN SPECIES 3115 Cdc37 (ENSMSIG00000016922) #7 Pde4a (ENSMSIG00000016751) #8 Keap1 (ENSMSIG00000016713) #9 S1pr5 (ENSMSIG00000016710) #10 Atg4d (ENSMSIG00000016653) #11 Kri1 (ENSMSIG00000016603) #12 Cdkn2d (ENSMSIG00000016582) #13 Ap1m2 (ENSMSIG00000016529) #14 Slc44a2 (ENSMSIG00000016395) #15 Ilf3 (ENSMSIG00000016302) #16 Qtrt1 (ENSMSIG00000016262) #17 Dnm2 (ENSMSIG00000015982) #18 Tmed1 (ENSMSIG00000015965) #19 AB124611 (ENSMSIG00000015890) #20 Yipf2 (ENSMSIG00000015831) #21 Carm1 (ENSMSIG00000015744) #22 Smarca4 (ENSMSIG00000015575) #23 Ldlr (ENSMSIG00000015469) #24 Spc24 (ENSMSIG00000015419) #25 Kank2 (ENSMSIG00000015384) #26 Angptl8 (ENSMSIG00000015367) #27 Dock6 (ENSMSIG00000015052) #28 Rab3d (ENSMSIG00000014980) #29 ENSMSIG00000014964 #30 Ccdc159 (ENSMSIG00000014895) #31 Plppr2 (ENSMSIG00000014788) #32 Swsap1 (ENSMSIG00000014781) #33 ENSMSIG00000014716 #34 ENSMSIG00000013921 #35 Odad3 (ENSMSIG00000013901) #36 Prkcsh (ENSMSIG00000013805) #37 spretus MODERN SPECIES 18 Tyk2 (MGP_SPRETEiJ_G0032985) Cdc37 (MGP_SPRETEiJ_G0032986) #7 Pde4a (MGP_SPRETEiJ_G0032987) #8 Keap1 (MGP_SPRETEiJ_G0032988) #9 S1pr5 (MGP_SPRETEiJ_G0032989) #10 Atg4d (MGP_SPRETEiJ_G0032990) #11 Kri1 (MGP_SPRETEiJ_G0032991) #12 Cdkn2d (MGP_SPRETEiJ_G0032992) #13 Ap1m2 (MGP_SPRETEiJ_G0032993) #14 Slc44a2 (MGP_SPRETEiJ_G0032994) #15 Ilf3 (MGP_SPRETEiJ_G0032995) #16 Qtrt1 (MGP_SPRETEiJ_G0032996) #17 Dnm2 (MGP_SPRETEiJ_G0032997) #18 Tmed1 (MGP_SPRETEiJ_G0032998) #19 AB124611 (MGP_SPRETEiJ_G0032999) #20 Carm1 (MGP_SPRETEiJ_G0033000) #22 Yipf2 (MGP_SPRETEiJ_G0033001) #21 Timm29 (MGP_SPRETEiJ_G0033002) Smarca4 (MGP_SPRETEiJ_G0033003) #23 Ldlr (MGP_SPRETEiJ_G0033004) #24 Spc24 (MGP_SPRETEiJ_G0033005) #25 Kank2 (MGP_SPRETEiJ_G0033006) #26 Dock6 (MGP_SPRETEiJ_G0033007) #28 Angptl8 (MGP_SPRETEiJ_G0033008) #27 Rab3d (MGP_SPRETEiJ_G0033009) #29 Tmem205 (MGP_SPRETEiJ_G0033010) #30 Ccdc159 (MGP_SPRETEiJ_G0033011) #31 Plppr2 (MGP_SPRETEiJ_G0033012) #32 Epor (MGP_SPRETEiJ_G0033013) #34 Rgl3 (MGP_SPRETEiJ_G0033014) #35 Odad3 (MGP_SPRETEiJ_G0033015) #36 Mouse MODERN SPECIES 18 Tyk2 (ENSMUSG00000032175) Cdc37 (ENSMUSG00000019471) #7 Pde4a (ENSMUSG00000032177) #8 Keap1 (ENSMUSG00000003308) #9 S1pr5 (ENSMUSG00000045087) #10 Atg4d (ENSMUSG00000002820) #11 Kri1 (ENSMUSG00000035047) #12 Cdkn2d (ENSMUSG00000096472) #13 Ap1m2 (ENSMUSG00000003309) #14 Slc44a2 (ENSMUSG00000057193) #15 Ilf3 (ENSMUSG00000032178) #16 Qtrt1 (ENSMUSG00000002825) #17 Dnm2 (ENSMUSG00000033335) #18 Tmed1 (ENSMUSG00000032180) #19 AB124611 (ENSMUSG00000057191) #20 Carm1 (ENSMUSG00000032185) #22 Yipf2 (ENSMUSG00000032182) #21 Timm29 (ENSMUSG00000048429) Smarca4 (ENSMUSG00000032187) #23 Ldlr (ENSMUSG00000032193) #24 Spc24 (ENSMUSG00000074476) #25 Kank2 (ENSMUSG00000032194) #26 Dock6 (ENSMUSG00000032198) #28 Angptl8 (ENSMUSG00000047822) #27 Rab3d (ENSMUSG00000019066) #29 Tmem205 (ENSMUSG00000040883) #30 Ccdc159 (ENSMUSG00000006241) #31 Plppr2 (ENSMUSG00000040563) #32 Swsap1 (ENSMUSG00000051238) #33 Epor (ENSMUSG00000006235) #34 Rgl3 (ENSMUSG00000040146) #35 Ryukyu mouse MODERN SPECIES 18 Tyk2 (MGP_CAROLIEiJ_G0031861) Cdc37 (MGP_CAROLIEiJ_G0031862) #7 Pde4a (MGP_CAROLIEiJ_G0031863) #8 Keap1 (MGP_CAROLIEiJ_G0031864) #9 S1pr5 (MGP_CAROLIEiJ_G0031865) #10 Atg4d (MGP_CAROLIEiJ_G0031866) #11 Kri1 (MGP_CAROLIEiJ_G0031867) #12 Cdkn2d (MGP_CAROLIEiJ_G0031868) #13 Ap1m2 (MGP_CAROLIEiJ_G0031869) #14 Slc44a2 (MGP_CAROLIEiJ_G0031870) #15 Ilf3 (MGP_CAROLIEiJ_G0031871) #16 Qtrt1 (MGP_CAROLIEiJ_G0031872) #17 Dnm2 (MGP_CAROLIEiJ_G0031873) #18 Tmed1 (MGP_CAROLIEiJ_G0031874) #19 AB124611 (MGP_CAROLIEiJ_G0031875) #20 Carm1 (MGP_CAROLIEiJ_G0031876) #22 Yipf2 (MGP_CAROLIEiJ_G0031877) #21 Timm29 (MGP_CAROLIEiJ_G0031878) Smarca4 (MGP_CAROLIEiJ_G0031879) #23 Ldlr (MGP_CAROLIEiJ_G0031880) #24 Spc24 (MGP_CAROLIEiJ_G0031881) #25 Kank2 (MGP_CAROLIEiJ_G0031882) #26 MGP_CAROLIEiJ_G0031883 #28 Angptl8 (MGP_CAROLIEiJ_G0031884) #27 Rab3d (MGP_CAROLIEiJ_G0031885) #29 Tmem205 (MGP_CAROLIEiJ_G0031886) #30 Ccdc159 (MGP_CAROLIEiJ_G0031887) #31 Plppr2 (MGP_CAROLIEiJ_G0031888) #32 Swsap1 (MGP_CAROLIEiJ_G0031889) #33 Epor (MGP_CAROLIEiJ_G0031890) #34 Rgl3 (MGP_CAROLIEiJ_G0031891) #35 Shrew mouse MODERN SPECIES 1 Tyk2 (MGP_PahariEiJ_G0014727) Cdc37 (MGP_PahariEiJ_G0014728) #7 Pde4a (MGP_PahariEiJ_G0014729) #8 Keap1 (MGP_PahariEiJ_G0014730) #9 S1pr5 (MGP_PahariEiJ_G0014731) #10 Atg4d (MGP_PahariEiJ_G0014732) #11 Kri1 (MGP_PahariEiJ_G0014733) #12 Cdkn2d (MGP_PahariEiJ_G0014734) #13 Ap1m2 (MGP_PahariEiJ_G0014735) #14 Slc44a2 (MGP_PahariEiJ_G0014736) #15 Ilf3 (MGP_PahariEiJ_G0014737) #16 Qtrt1 (MGP_PahariEiJ_G0014738) #17 Dnm2 (MGP_PahariEiJ_G0014739) #18 Tmed1 (MGP_PahariEiJ_G0014740) #19 AB124611 (MGP_PahariEiJ_G0014741) #20 Carm1 (MGP_PahariEiJ_G0014742) #22 Yipf2 (MGP_PahariEiJ_G0014743) #21 Timm29 (MGP_PahariEiJ_G0014744) Smarca4 (MGP_PahariEiJ_G0014745) #23 Ldlr (MGP_PahariEiJ_G0014746) #24 MGP_PahariEiJ_G0014747 #25 Kank2 (MGP_PahariEiJ_G0014748) #26 Dock6 (MGP_PahariEiJ_G0014749) #28 Angptl8 (MGP_PahariEiJ_G0014750) #27 Rab3d (MGP_PahariEiJ_G0014751) #29 Tmem205 (MGP_PahariEiJ_G0014752) #30 Ccdc159 (MGP_PahariEiJ_G0014753) #31 Plppr2 (MGP_PahariEiJ_G0014754) #32 Swsap1 (MGP_PahariEiJ_G0014755) #33 Epor (MGP_PahariEiJ_G0014756) #34 Rgl3 (MGP_PahariEiJ_G0014757) #35 Rat MODERN SPECIES 18 Tyk2 (ENSRNOG00000032948) Cdc37 (ENSRNOG00000033426) #7 Pde4a (ENSRNOG00000020828) #8 Keap1 (ENSRNOG00000020878) #9 S1pr5 (ENSRNOG00000020901) #10 Atg4d (ENSRNOG00000047625) #11 Kri1 (ENSRNOG00000057447) #12 Cdkn2d (ENSRNOG00000064248) #13 Ap1m2 (ENSRNOG00000043093) #14 Slc44a2 (ENSRNOG00000031824) #15 Ilf3 (ENSRNOG00000022741) #16 Qtrt1 (ENSRNOG00000007158) #17 Dnm2 (ENSRNOG00000007649) #18 Tmed1 (ENSRNOG00000008037) #19 LOC691141 (ENSRNOG00000033256) #20 Carm1 (ENSRNOG00000031129) #22 Yipf2 (ENSRNOG00000022043) #21 Smarca4 (ENSRNOG00000009271) #23 Ldlr (ENSRNOG00000009946) #24 Spc24 (ENSRNOG00000029862) #25 Kank2 (ENSRNOG00000010643) #26 Dock6 (ENSRNOG00000010652) #28 Angptl8 (ENSRNOG00000011490) #27 Rab3d (ENSRNOG00000011582) #29 Tmem205 (ENSRNOG00000011747) #30 Ccdc159 (ENSRNOG00000011799) #31 Plppr2 (ENSRNOG00000012164) #32 Swsap1 (ENSRNOG00000012604) #33 Epor (ENSRNOG00000012619) #34 Odad3 (ENSRNOG00000013263) #36 Prkcsh (ENSRNOG00000013360) #37 Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Cricetidae_B ANCESTRAL SPECIES 16 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Northern American deer mouse MODERN SPECIES 20 Tyk2 (ENSPEMG00000011071) Cdc37 (ENSPEMG00000023710) #7 Pde4a (ENSPEMG00000023071) #8 Keap1 (ENSPEMG00000022907) #9 S1pr5 (ENSPEMG00000015460) #10 Atg4d (ENSPEMG00000004633) #11 Kri1 (ENSPEMG00000024201) #12 Cdkn2d (ENSPEMG00000030087) #13 Ap1m2 (ENSPEMG00000023352) #14 Slc44a2 (ENSPEMG00000008320) #15 ENSPEMG00000000465 #16 Qtrt1 (ENSPEMG00000009897) #17 Dnm2 (ENSPEMG00000022844) #18 Tmed1 (ENSPEMG00000014342) #19 AB124611 (ENSPEMG00000011218) #20 Carm1 (ENSPEMG00000023286) #22 Yipf2 (ENSPEMG00000022941) #21 Timm29 (ENSPEMG00000031004) Smarca4 (ENSPEMG00000020389) #23 Ldlr (ENSPEMG00000021260) #24 Spc24 (ENSPEMG00000009453) #25 Kank2 (ENSPEMG00000000736) #26 Dock6 (ENSPEMG00000010133) #28 Angptl8 (ENSPEMG00000015174) #27 ENSPEMG00000014770 Rab3d (ENSPEMG00000031189) #29 Tmem205 (ENSPEMG00000020320) #30 Ccdc159 (ENSPEMG00000014545) #31 Plppr2 (ENSPEMG00000020521) #32 Swsap1 (ENSPEMG00000017184) #33 Epor (ENSPEMG00000020463) #34 Prairie vole MODERN SPECIES 13 Tyk2 (ENSMOCG00000017994) Cdc37 (ENSMOCG00000020700) #7 Pde4a (ENSMOCG00000007095) #8 Keap1 (ENSMOCG00000009445) #9 S1pr5 (ENSMOCG00000005836) #10 Atg4d (ENSMOCG00000002959) #11 Kri1 (ENSMOCG00000017013) #12 Cdkn2d (ENSMOCG00000016257) #13 Ap1m2 (ENSMOCG00000000638) #14 Slc44a2 (ENSMOCG00000014267) #15 Ilf3 (ENSMOCG00000018740) #16 Qtrt1 (ENSMOCG00000019584) #17 Dnm2 (ENSMOCG00000018580) #18 Tmed1 (ENSMOCG00000007785) #19 AB124611 (ENSMOCG00000014256) #20 Carm1 (ENSMOCG00000004215) #22 Yipf2 (ENSMOCG00000017806) #21 ENSMOCG00000019898 Smarca4 (ENSMOCG00000022209) #23 Ldlr (ENSMOCG00000016718) #24 Spc24 (ENSMOCG00000023025) #25 Kank2 (ENSMOCG00000008426) #26 Dock6 (ENSMOCG00000015812) #28 Angptl8 (ENSMOCG00000022983) #27 Rab3d (ENSMOCG00000002683) #29 Tmem205 (ENSMOCG00000003259) #30 Ccdc159 (ENSMOCG00000010436) #31 Plppr2 (ENSMOCG00000011755) #32 Swsap1 (ENSMOCG00000010976) #33 Epor (ENSMOCG00000013170) #34 Rgl3 (ENSMOCG00000014876) #35 Cricetinae ANCESTRAL SPECIES 30 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 ENSGT00940000161935 #35 Chinese hamster chok1gshd MODERN SPECIES 189 Tyk2 (ENSCGRG00001016315) ENSCGRG00001017764 #7 Pde4a (ENSCGRG00001014442) #8 Keap1 (ENSCGRG00001016562) #9 S1pr5 (ENSCGRG00001009679) #10 Atg4d (ENSCGRG00001017644) #11 Kri1 (ENSCGRG00001018764) #12 Cdkn2d (ENSCGRG00001019561) #13 Ap1m2 (ENSCGRG00001020691) #14 Slc44a2 (ENSCGRG00001014087) #15 Ilf3 (ENSCGRG00001021577) #16 Qtrt1 (ENSCGRG00001001152) #17 Dnm2 (ENSCGRG00001015804) #18 Tmed1 (ENSCGRG00001018097) #19 AB124611 (ENSCGRG00001019412) #20 Carm1 (ENSCGRG00001023212) #22 Yipf2 (ENSCGRG00001005089) #21 Timm29 (ENSCGRG00001007273) Smarca4 (ENSCGRG00001016732) #23 Ldlr (ENSCGRG00001014331) #24 Spc24 (ENSCGRG00001015236) #25 Kank2 (ENSCGRG00001019422) #26 Dock6 (ENSCGRG00001024445) #28 Angptl8 (ENSCGRG00001017874) #27 Rab3d (ENSCGRG00001019307) #29 Tmem205 (ENSCGRG00001022126) #30 Ccdc159 (ENSCGRG00001023310) #31 Plppr2 (ENSCGRG00001018956) #32 Swsap1 (ENSCGRG00001003241) #33 Epor (ENSCGRG00001009147) #34 Rgl3 (ENSCGRG00001012320) #35 Golden Hamster MODERN SPECIES 700 Tyk2 (ENSMAUG00000017865) Cdc37 (ENSMAUG00000008486) #7 Pde4a (ENSMAUG00000013828) #8 Keap1 (ENSMAUG00000007914) #9 S1pr5 (ENSMAUG00000000259) #10 Atg4d (ENSMAUG00000020205) #11 Kri1 (ENSMAUG00000011484) #12 Cdkn2d (ENSMAUG00000001161) #13 Ap1m2 (ENSMAUG00000012894) #14 Slc44a2 (ENSMAUG00000010847) #15 Ilf3 (ENSMAUG00000020405) #16 Qtrt1 (ENSMAUG00000020794) #17 ENSMAUG00000019307 #18 ENSMAUG00000013381 #18 Tmed1 (ENSMAUG00000008835) #19 Carm1 (ENSMAUG00000020443) #22 Yipf2 (ENSMAUG00000019367) #21 Timm29 (ENSMAUG00000016236) Smarca4 (ENSMAUG00000020731) #23 Ldlr (ENSMAUG00000018237) #24 Spc24 (ENSMAUG00000016753) #25 Kank2 (ENSMAUG00000011226) #26 Angptl8 (ENSMAUG00000014435) #27 Dock6 (ENSMAUG00000020369) #28 Rab3d (ENSMAUG00000011273) #29 Ccdc159 (ENSMAUG00000002172) #31 Plppr2 (ENSMAUG00000012058) #32 Swsap1 (ENSMAUG00000018796) #33 Epor (ENSMAUG00000015533) #34 Rgl3 (ENSMAUG00000015321) #35 Odad3 (ENSMAUG00000003747) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 850 Carm1 (ENSNGAG00000001362) #22 Yipf2 (ENSNGAG00000010607) #21 Timm29 (ENSNGAG00000016810) Smarca4 (ENSNGAG00000021852) #23 Ldlr (ENSNGAG00000018614) #24 Spc24 (ENSNGAG00000005326) #25 ENSNGAG00000001359 #26 Dock6 (ENSNGAG00000004348) #28 Angptl8 (ENSNGAG00000016227) #27 Rab3d (ENSNGAG00000016962) #29 Tmem205 (ENSNGAG00000017217) #30 Ccdc159 (ENSNGAG00000017828) #31 Plppr2 (ENSNGAG00000012541) #32 ENSNGAG00000013744 #33 Epor (ENSNGAG00000014154) #34 Rgl3 (ENSNGAG00000015700) #35 Lesser Egyptian jerboa MODERN SPECIES 143 Tyk2 (ENSJJAG00000020250) Cdc37 (ENSJJAG00000021223) #7 Pde4a (ENSJJAG00000022269) #8 Keap1 (ENSJJAG00000000119) #9 S1pr5 (ENSJJAG00000013383) #10 Atg4d (ENSJJAG00000000341) #11 Kri1 (ENSJJAG00000002972) #12 Cdkn2d (ENSJJAG00000008566) #13 Ap1m2 (ENSJJAG00000009862) #14 Slc44a2 (ENSJJAG00000011453) #15 ENSJJAG00000013051 #16 Qtrt1 (ENSJJAG00000013307) #17 Dnm2 (ENSJJAG00000015316) #18 Tmed1 (ENSJJAG00000018485) #19 AB124611 (ENSJJAG00000002332) #20 Carm1 (ENSJJAG00000008047) #22 Yipf2 (ENSJJAG00000010227) #21 Timm29 (ENSJJAG00000010999) Smarca4 (ENSJJAG00000012877) #23 Ldlr (ENSJJAG00000016661) #24 ENSJJAG00000013464 Spc24 (ENSJJAG00000017112) #25 Kank2 (ENSJJAG00000017464) #26 Dock6 (ENSJJAG00000019330) #28 Angptl8 (ENSJJAG00000022577) #27 ENSJJAG00000013629 ENSJJAG00000000215 #29 Tmem205 (ENSJJAG00000000261) #30 Ccdc159 (ENSJJAG00000000427) #31 Plppr2 (ENSJJAG00000001171) #32 Swsap1 (ENSJJAG00000004050) #33 Kangaroo rat MODERN SPECIES 498 Raver1 (ENSDORG00000010106) Tyk2 (ENSDORG00000010102) Cdc37 (ENSDORG00000029470) #7 Pde4a (ENSDORG00000013594) #8 Keap1 (ENSDORG00000013598) #9 ENSDORG00000028548 Atg4d (ENSDORG00000013442) #11 Kri1 (ENSDORG00000013443) #12 Ap1m2 (ENSDORG00000013447) #14 Slc44a2 (ENSDORG00000011152) #15 Ilf3 (ENSDORG00000015231) #16 Qtrt1 (ENSDORG00000015233) #17 Dnm2 (ENSDORG00000015234) #18 Tmed1 (ENSDORG00000025876) #19 AB124611 (ENSDORG00000013393) #20 Carm1 (ENSDORG00000013395) #22 Yipf2 (ENSDORG00000013396) #21 Timm29 (ENSDORG00000013397) Smarca4 (ENSDORG00000002544) #23 Ldlr (ENSDORG00000011310) #24 Spc24 (ENSDORG00000029533) #25 ENSDORG00000023590 #26 Dock6 (ENSDORG00000006851) #28 Angptl8 (ENSDORG00000006854) #27 Rab3d (ENSDORG00000023961) #29 Tmem205 (ENSDORG00000002522) #30 Plppr2 (ENSDORG00000002524) #32 Epor (ENSDORG00000002529) #34 Rgl3 (ENSDORG00000002531) #35 ENSDORG00000002533 Prkcsh (ENSDORG00000002536) #37 Rodentia_A ANCESTRAL SPECIES 16 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00900000143551 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Sciuridae ANCESTRAL SPECIES 20 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00900000143551 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Eurasian red squirrel MODERN SPECIES 7 CDC37 (ENSSVLG00005020567) #7 PDE4A (ENSSVLG00005020638) #8 KEAP1 (ENSSVLG00005020889) #9 S1PR5 (ENSSVLG00005020921) #10 ATG4D (ENSSVLG00005020947) #11 KRI1 (ENSSVLG00005020995) #12 CDKN2D (ENSSVLG00005021167) #13 ENSSVLG00005021219 #14 SLC44A2 (ENSSVLG00005021433) #15 ENSSVLG00005021542 ILF3 (ENSSVLG00005021649) #16 QTRT1 (ENSSVLG00005021743) #17 DNM2 (ENSSVLG00005021854) #18 TMED1 (ENSSVLG00005022048) #19 C19orf38 (ENSSVLG00005022088) #20 CARM1 (ENSSVLG00005022155) #22 YIPF2 (ENSSVLG00005022404) #21 LDLR (ENSSVLG00005023861) #24 SPC24 (ENSSVLG00005024002) #25 KANK2 (ENSSVLG00005024021) #26 DOCK6 (ENSSVLG00005024084) #28 ANGPTL8 (ENSSVLG00005024122) #27 TSPAN16 (ENSSVLG00005024177) RAB3D (ENSSVLG00005024280) #29 TMEM205 (ENSSVLG00005024312) #30 CCDC159 (ENSSVLG00005024349) #31 PLPPR2 (ENSSVLG00005024405) #32 SWSAP1 (ENSSVLG00005024453) #33 EPOR (ENSSVLG00005024468) #34 RGL3 (ENSSVLG00005024512) #35 ODAD3 (ENSSVLG00005024648) #36 Marmotini ANCESTRAL SPECIES 41 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Alpin marmot MODERN SPECIES 24 TYK2 (ENSMMMG00000017895) CDC37 (ENSMMMG00000017941) #7 PDE4A (ENSMMMG00000017967) #8 KEAP1 (ENSMMMG00000018969) #9 ENSMMMG00000018981 #10 ATG4D (ENSMMMG00000018985) #11 KRI1 (ENSMMMG00000019036) #12 ENSMMMG00000019102 AP1M2 (ENSMMMG00000019106) #14 SLC44A2 (ENSMMMG00000019127) #15 ILF3 (ENSMMMG00000019155) #16 QTRT1 (ENSMMMG00000019561) #17 DNM2 (ENSMMMG00000019573) #18 TMED1 (ENSMMMG00000019775) #19 C19orf38 (ENSMMMG00000019779) #20 CARM1 (ENSMMMG00000019799) #22 YIPF2 (ENSMMMG00000019805) #21 ENSMMMG00000019820 SMARCA4 (ENSMMMG00000019826) #23 LDLR (ENSMMMG00000019891) #24 SPC24 (ENSMMMG00000019947) #25 KANK2 (ENSMMMG00000019957) #26 DOCK6 (ENSMMMG00000019995) #28 ANGPTL8 (ENSMMMG00000020098) #27 TSPAN16 (ENSMMMG00000020105) RAB3D (ENSMMMG00000020113) #29 TMEM205 (ENSMMMG00000020116) #30 CCDC159 (ENSMMMG00000020119) #31 PLPPR2 (ENSMMMG00000020126) #32 SWSAP1 (ENSMMMG00000020143) #33 EPOR (ENSMMMG00000020144) #34 Marmotini_b ANCESTRAL SPECIES 40 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Arctic ground squirrel MODERN SPECIES 217 TYK2 (ENSUPAG00010001822) CDC37 (ENSUPAG00010001857) #7 PDE4A (ENSUPAG00010001873) #8 KEAP1 (ENSUPAG00010001991) #9 ENSUPAG00010002004 #10 ATG4D (ENSUPAG00010002014) #11 KRI1 (ENSUPAG00010002031) #12 CDKN2D (ENSUPAG00010002067) #13 AP1M2 (ENSUPAG00010002081) #14 SLC44A2 (ENSUPAG00010002115) #15 ILF3 (ENSUPAG00010002202) #16 QTRT1 (ENSUPAG00010002480) #17 DNM2 (ENSUPAG00010002497) #18 TMED1 (ENSUPAG00010003125) #19 C19orf38 (ENSUPAG00010003139) #20 CARM1 (ENSUPAG00010003160) #22 YIPF2 (ENSUPAG00010003190) #21 TIMM29 (ENSUPAG00010003216) SMARCA4 (ENSUPAG00010003222) #23 LDLR (ENSUPAG00010003299) #24 SPC24 (ENSUPAG00010003350) #25 KANK2 (ENSUPAG00010003372) #26 DOCK6 (ENSUPAG00010003421) #28 ANGPTL8 (ENSUPAG00010007137) #27 TSPAN16 (ENSUPAG00010007148) RAB3D (ENSUPAG00010007164) #29 TMEM205 (ENSUPAG00010007186) #30 CCDC159 (ENSUPAG00010007207) #31 PLPPR2 (ENSUPAG00010007227) #32 SWSAP1 (ENSUPAG00010007321) #33 EPOR (ENSUPAG00010007323) #34 Squirrel MODERN SPECIES 259 TYK2 (ENSSTOG00000003264) CDC37 (ENSSTOG00000015962) #7 PDE4A (ENSSTOG00000027947) #8 KEAP1 (ENSSTOG00000010114) #9 S1PR5 (ENSSTOG00000024850) #10 ATG4D (ENSSTOG00000023750) #11 KRI1 (ENSSTOG00000007660) #12 ENSSTOG00000023338 #13 AP1M2 (ENSSTOG00000007719) #14 SLC44A2 (ENSSTOG00000007737) #15 ILF3 (ENSSTOG00000007786) #16 QTRT1 (ENSSTOG00000020466) #17 DNM2 (ENSSTOG00000007826) #18 TMED1 (ENSSTOG00000023250) #19 C19orf38 (ENSSTOG00000024893) #20 CARM1 (ENSSTOG00000007864) #22 YIPF2 (ENSSTOG00000007905) #21 TIMM29 (ENSSTOG00000026705) SMARCA4 (ENSSTOG00000007939) #23 LDLR (ENSSTOG00000007999) #24 SPC24 (ENSSTOG00000008026) #25 KANK2 (ENSSTOG00000008035) #26 DOCK6 (ENSSTOG00000023652) #28 ANGPTL8 (ENSSTOG00000026191) #27 TSPAN16 (ENSSTOG00000002961) RAB3D (ENSSTOG00000027509) #29 TMEM205 (ENSSTOG00000005779) #30 CCDC159 (ENSSTOG00000005786) #31 PLPPR2 (ENSSTOG00000010119) #32 SWSAP1 (ENSSTOG00000002990) #33 EPOR (ENSSTOG00000002992) #34 Hystricomorpha ANCESTRAL SPECIES 19 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00900000143551 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Naked mole-rat female MODERN SPECIES 21 PDE4A (ENSHGLG00000015878) #8 KEAP1 (ENSHGLG00000015222) #9 S1PR5 (ENSHGLG00000045386) #10 ATG4D (ENSHGLG00000007086) #11 KRI1 (ENSHGLG00000015240) #12 CDKN2D (ENSHGLG00000013311) #13 AP1M2 (ENSHGLG00000017835) #14 ENSHGLG00000044071 SLC44A2 (ENSHGLG00000011332) #15 ENSHGLG00000036847 ENSHGLG00000019494 #16 QTRT1 (ENSHGLG00000018553) #17 DNM2 (ENSHGLG00000014318) #18 TMED1 (ENSHGLG00000034031) #19 C19orf38 (ENSHGLG00000048163) #20 CARM1 (ENSHGLG00000007754) #22 YIPF2 (ENSHGLG00000005585) #21 TIMM29 (ENSHGLG00000031869) SMARCA4 (ENSHGLG00000010519) #23 LDLR (ENSHGLG00000014530) #24 SPC24 (ENSHGLG00000005561) #25 KANK2 (ENSHGLG00000006720) #26 ENSHGLG00000034129 #27 DOCK6 (ENSHGLG00000009688) #28 TSPAN16 (ENSHGLG00000017884) RAB3D (ENSHGLG00000015577) #29 TMEM205 (ENSHGLG00000014918) #30 ENSHGLG00000040073 #31 PLPPR2 (ENSHGLG00000015100) #32 SWSAP1 (ENSHGLG00000015941) #33 EPOR (ENSHGLG00000017626) #34 Hystricomorpha_a ANCESTRAL SPECIES 15 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Guinea pig MODERN SPECIES 214 ATG4D (ENSCPOG00000010314) #11 KRI1 (ENSCPOG00000010323) #12 CDKN2D (ENSCPOG00000035178) #13 AP1M2 (ENSCPOG00000026213) #14 SLC44A2 (ENSCPOG00000013720) #15 ILF3 (ENSCPOG00000013726) #16 QTRT1 (ENSCPOG00000025300) #17 DNM2 (ENSCPOG00000002296) #18 TMED1 (ENSCPOG00000033109) #19 C19orf38 (ENSCPOG00000025508) #20 CARM1 (ENSCPOG00000015465) #22 YIPF2 (ENSCPOG00000026134) #21 TIMM29 (ENSCPOG00000031154) SMARCA4 (ENSCPOG00000015549) #23 LDLR (ENSCPOG00000006816) #24 KANK2 (ENSCPOG00000027433) #26 DOCK6 (ENSCPOG00000026620) #28 ANGPTL8 (ENSCPOG00000030760) #27 TSPAN16 (ENSCPOG00000020079) RAB3D (ENSCPOG00000030555) #29 TMEM205 (ENSCPOG00000026260) #30 ENSCPOG00000005662 #31 PLPPR2 (ENSCPOG00000005664) #32 SWSAP1 (ENSCPOG00000001918) #33 EPOR (ENSCPOG00000004895) #34 RGL3 (ENSCPOG00000009865) #35 Hystricomorpha_b ANCESTRAL SPECIES 17 ENSGT00940000159869 ENSGT00390000013443.c #7 ENSGT00940000159788.b #8 ENSGT00940000159543 #9 ENSGT01050000244887.A.a.a.a #10 ENSGT00530000063000.a.a.b #11 ENSGT00390000005605 #12 ENSGT00940000159801.B #13 ENSGT00940000159089 #14 ENSGT00940000158178 #15 ENSGT00940000156719 #16 ENSGT00530000063679.B #17 ENSGT00940000155764.C #18 ENSGT00940000158445 #19 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 ENSGT00390000005584 #25 ENSGT00940000161012 #26 ENSGT00940000159313 #28 ENSGT00440000034383 #27 ENSGT00510000049338 ENSGT00940000157552 #29 ENSGT00390000016298.a #30 ENSGT00390000008201 #31 ENSGT00940000158145 #32 ENSGT00390000007170 #33 ENSGT00940000160315 #34 Long-tailed chinchilla MODERN SPECIES 202 TYK2 (ENSCLAG00000013417) CDC37 (ENSCLAG00000004550) #7 PDE4A (ENSCLAG00000005445) #8 KEAP1 (ENSCLAG00000011003) #9 S1PR5 (ENSCLAG00000011673) #10 ATG4D (ENSCLAG00000004668) #11 KRI1 (ENSCLAG00000006582) #12 CDKN2D (ENSCLAG00000016365) #13 AP1M2 (ENSCLAG00000015388) #14 SLC44A2 (ENSCLAG00000017339) #15 ILF3 (ENSCLAG00000011537) #16 QTRT1 (ENSCLAG00000009859) #17 DNM2 (ENSCLAG00000008156) #18 TMED1 (ENSCLAG00000008870) #19 C19orf38 (ENSCLAG00000009782) #20 CARM1 (ENSCLAG00000011012) #22 YIPF2 (ENSCLAG00000011701) #21 TIMM29 (ENSCLAG00000014951) SMARCA4 (ENSCLAG00000011946) #23 LDLR (ENSCLAG00000015453) #24 DOCK6 (ENSCLAG00000015319) #28 ANGPTL8 (ENSCLAG00000007166) #27 TSPAN16 (ENSCLAG00000008629) RAB3D (ENSCLAG00000007049) #29 TMEM205 (ENSCLAG00000007329) #30 ENSCLAG00000007718 #31 PLPPR2 (ENSCLAG00000008970) #32 SWSAP1 (ENSCLAG00000011027) #33 EPOR (ENSCLAG00000007667) #34 RGL3 (ENSCLAG00000008655) #35 ODAD3 (ENSCLAG00000008412) #36 Degu MODERN SPECIES 91 TYK2 (ENSODEG00000016347) CDC37 (ENSODEG00000016453) #7 PDE4A (ENSODEG00000016246) #8 KEAP1 (ENSODEG00000016128) #9 S1PR5 (ENSODEG00000020555) #10 ATG4D (ENSODEG00000016344) #11 KRI1 (ENSODEG00000016083) #12 CDKN2D (ENSODEG00000016627) #13 AP1M2 (ENSODEG00000016673) #14 SLC44A2 (ENSODEG00000016516) #15 ILF3 (ENSODEG00000015951) #16 QTRT1 (ENSODEG00000015894) #17 DNM2 (ENSODEG00000016299) #18 TMED1 (ENSODEG00000016351) #19 C19orf38 (ENSODEG00000015704) #20 CARM1 (ENSODEG00000015950) #22 YIPF2 (ENSODEG00000015957) #21 TIMM29 (ENSODEG00000015866) SMARCA4 (ENSODEG00000017127) #23 LDLR (ENSODEG00000015446) #24 SPC24 (ENSODEG00000016091) #25 KANK2 (ENSODEG00000015842) #26 ANGPTL8 (ENSODEG00000015983) #27 DOCK6 (ENSODEG00000016301) #28 ENSODEG00000015574 #29 TMEM205 (ENSODEG00000016141) #30 ENSODEG00000015784 #31 PLPPR2 (ENSODEG00000018491) #32 SWSAP1 (ENSODEG00000015882) #33 EPOR (ENSODEG00000015732) #34 RGL3 (ENSODEG00000015605) #35 Lagomorpha ANCESTRAL SPECIES 331 ENSGT00390000008862 #20 ENSGT00940000160377 #22 ENSGT00390000010157.b #21 ENSGT00390000018541 ENSGT00940000156887 #23 ENSGT00940000161046 #24 Rabbit MODERN SPECIES 647 PDE4A (ENSOCUG00000001428) #8 KEAP1 (ENSOCUG00000001435) #9 S1PR5 (ENSOCUG00000001437) #10 ATG4D (ENSOCUG00000014176) #11 KRI1 (ENSOCUG00000014181) #12 AP1M2 (ENSOCUG00000024334) #14 ENSOCUG00000022727 #13 SLC44A2 (ENSOCUG00000015558) #15 ILF3 (ENSOCUG00000013990) #16 QTRT1 (ENSOCUG00000021082) #17 TMED1 (ENSOCUG00000015317) #19 C19orf38 (ENSOCUG00000027943) #20 CARM1 (ENSOCUG00000003368) #22 YIPF2 (ENSOCUG00000003381) #21 TIMM29 (ENSOCUG00000003385) DNM2 (ENSOCUG00000015302) #18 SMARCA4 (ENSOCUG00000001787) #23 LDLR (ENSOCUG00000000651) #24