Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT00900000143602	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36
Glires	ANCESTRAL SPECIES	3	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT00900000143602	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36
Rodentia	ANCESTRAL SPECIES	4	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT00900000143602	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT00900000143602	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT00900000143602	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36
Marmotini	ANCESTRAL SPECIES	8	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.e.a ##11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e.i.b ##13	ENSGT00950000183207.b.e.i.a ##13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT00900000143602	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.e.a ##11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e.j #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37	ENSGT01080000257420.C.b.b.a.b.b ##37
Arctic ground squirrel	MODERN SPECIES	46	IFI35 (ENSUPAG00010010305) #7	ENSUPAG00010010297 #8	RUNDC1 (ENSUPAG00010010289) #9	PTGES3L (ENSUPAG00010010253) #10	AARSD1 (ENSUPAG00010010235) #11	G6PC1 (ENSUPAG00010010230) #12	AOC3 (ENSUPAG00010010214) #13	AOC2 (ENSUPAG00010010206) #14	PSME3 (ENSUPAG00010010193) #15	BECN1 (ENSUPAG00010010164) #16	CNTD1 (ENSUPAG00010010156) #17	COA3 (ENSUPAG00010010147) #18	WNK4 (ENSUPAG00010010115) #19	VPS25 (ENSUPAG00010010087) #20	RAMP2 (ENSUPAG00010010079) #21	EZH1 (ENSUPAG00010009961) #22	CCR10 (ENSUPAG00010009957) #23	CNTNAP1 (ENSUPAG00010009924) #24	PLEKHH3 (ENSUPAG00010009888) #25	ENSUPAG00010009880 #26	TUBG1 (ENSUPAG00010009862) #27	RETREG3 (ENSUPAG00010009853) #28	PSMC3IP (ENSUPAG00010009849) #29	MLX (ENSUPAG00010009827) #30	COASY (ENSUPAG00010009813) #31	HSD17B1 (ENSUPAG00010009808) #32	NAGLU (ENSUPAG00010009802) #33	ATP6V0A1 (ENSUPAG00010009720) #34	CAVIN1 (ENSUPAG00010009709) #35	STAT3 (ENSUPAG00010009648) #36	STAT5A (ENSUPAG00010009605) #37
Squirrel	MODERN SPECIES	90	IFI35 (ENSSTOG00000000491) #7	RPL27 (ENSSTOG00000020555) #8	RUNDC1 (ENSSTOG00000000487) #9	PTGES3L (ENSSTOG00000029580) #10	ENSSTOG00000000481 ##11	G6PC1 (ENSSTOG00000022070) #12	ENSSTOG00000012633 ##13	ENSSTOG00000034249 ##13	PSME3 (ENSSTOG00000028833) #15	BECN1 (ENSSTOG00000012612) #16	CNTD1 (ENSSTOG00000012598) #17	COA3 (ENSSTOG00000020760) #18	WNK4 (ENSSTOG00000003814) #19	VPS25 (ENSSTOG00000003805) #20	RAMP2 (ENSSTOG00000034445) #21	EZH1 (ENSSTOG00000003776) #22	CNTNAP1 (ENSSTOG00000003759) #24	CCR10 (ENSSTOG00000020451) #23	PLEKHH3 (ENSSTOG00000003732) #25	TUBG2 (ENSSTOG00000003716)	RETREG3 (ENSSTOG00000003702) #28	PSMC3IP (ENSSTOG00000003682) #29	MLX (ENSSTOG00000003660) #30	COASY (ENSSTOG00000003638) #31	HSD17B1 (ENSSTOG00000003627) #32	NAGLU (ENSSTOG00000003602) #33	ATP6V0A1 (ENSSTOG00000003569) #34	STAT3 (ENSSTOG00000006741) #36	STAT5A (ENSSTOG00000006713) #37	STAT5B (ENSSTOG00000006691) ##37	GHDC (ENSSTOG00000022647)
Alpin marmot	MODERN SPECIES	42	RPL27 (ENSMMMG00000004795) #8	PTGES3L (ENSMMMG00000004807) #10	AARSD1 (ENSMMMG00000004840) ##11	G6PC1 (ENSMMMG00000004865) #12	ENSMMMG00000004872	ENSMMMG00000004888 ##13	ENSMMMG00000004904 ##13	AOC2 (ENSMMMG00000004937) #14	PSME3 (ENSMMMG00000004954) #15	BECN1 (ENSMMMG00000004985) #16	CNTD1 (ENSMMMG00000005038) #17	COA3 (ENSMMMG00000005055) #18	WNK4 (ENSMMMG00000005066) #19	VPS25 (ENSMMMG00000005115) #20	ENSMMMG00000005184 #21	EZH1 (ENSMMMG00000005196) #22	CNTNAP1 (ENSMMMG00000005268) #24	ENSMMMG00000005324	CCR10 (ENSMMMG00000005331) #23	PLEKHH3 (ENSMMMG00000005351) #25	TUBG2 (ENSMMMG00000005392)	TUBG1 (ENSMMMG00000005405) #26	RETREG3 (ENSMMMG00000005418) #28	PSMC3IP (ENSMMMG00000005444) #29	MLX (ENSMMMG00000005464) #30	COASY (ENSMMMG00000005496) #31	HSD17B1 (ENSMMMG00000005512) #32	NAGLU (ENSMMMG00000005528) #33	ATP6V0A1 (ENSMMMG00000005552) #34	CAVIN1 (ENSMMMG00000005775) #35	STAT3 (ENSMMMG00000005779) #36
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005003267 #9	PTGES3L (ENSSVLG00005003296) #10	AARSD1 (ENSSVLG00005003326) #11	ENSSVLG00005003345	G6PC1 (ENSSVLG00005003362) #12	ENSSVLG00005003399 #13	ENSSVLG00005003490 #13	AOC2 (ENSSVLG00005003596) #14	ENSSVLG00005003672 #15	BECN1 (ENSSVLG00005003759) #16	CNTD1 (ENSSVLG00005003791) #17	COA3 (ENSSVLG00005003810) #18	WNK4 (ENSSVLG00005003835) #19	VPS25 (ENSSVLG00005003880) #20	RAMP2 (ENSSVLG00005003908) #21	EZH1 (ENSSVLG00005003960) #22	CNTNAP1 (ENSSVLG00005004025) #24	CCR10 (ENSSVLG00005004046) #23	PLEKHH3 (ENSSVLG00005004060) #25	TUBG2 (ENSSVLG00005004078)	TUBG1 (ENSSVLG00005004092) #26	RETREG3 (ENSSVLG00005004111) #28	PSMC3IP (ENSSVLG00005004134) #29	MLX (ENSSVLG00005004171) #30	COASY (ENSSVLG00005004216) #31	HSD17B1 (ENSSVLG00005004237) #32	ENSSVLG00005004269 #33	ATP6V0A1 (ENSSVLG00005004340) #34	CAVIN1 (ENSSVLG00005004409) #35	STAT3 (ENSSVLG00005004451) #36	STAT5A (ENSSVLG00005004549) #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000157579	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e.k #13	ENSGT00950000183098.a.k #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.b.c ##37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000157579	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e.k #13	ENSGT00950000183098.a.k #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.b.d ##37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000157579	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e.k #13	ENSGT00950000183098.a.k #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.b.d ##37
Degu	DUPLICATION
Degu	MODERN SPECIES	97	RND2 (ENSODEG00000018031)	VAT1 (ENSODEG00000017994)	IFI35 (ENSODEG00000018361) #7	RPL27 (ENSODEG00000018089) #8	RUNDC1 (ENSODEG00000018035) #9	AARSD1 (ENSODEG00000018082) #11	G6PC1 (ENSODEG00000017978) #12	AOC3 (ENSODEG00000018014) #13	ENSODEG00000018174 #15	BECN1 (ENSODEG00000017992) #16	CNTD1 (ENSODEG00000018061) #17	COA3 (ENSODEG00000018075) #18	WNK4 (ENSODEG00000018004) #19	VPS25 (ENSODEG00000018342) #20	RAMP2 (ENSODEG00000017963) #21	ENSODEG00000017986 #22	CNTNAP1 (ENSODEG00000018056) #24	CCR10 (ENSODEG00000017981) #23	PLEKHH3 (ENSODEG00000018103) #25	TUBG2 (ENSODEG00000018001)	TUBG1 (ENSODEG00000018022) #26	RETREG3 (ENSODEG00000018095) #28	PSMC3IP (ENSODEG00000017995) #29	MLX (ENSODEG00000017951) #30	COASY (ENSODEG00000018042) #31	HSD17B1 (ENSODEG00000018063) #32	NAGLU (ENSODEG00000017945) #33	ATP6V0A1 (ENSODEG00000017959) #34	CAVIN1 (ENSODEG00000017991) #35	ENSODEG00000017971 #36	ENSODEG00000018044 ##37
Degu	MODERN SPECIES	50	ENSODEG00000013354	ENSODEG00000013881	MCTP1 (ENSODEG00000014120)	SKIC3 (ENSODEG00000013744)	ARSK (ENSODEG00000014584)	RFESD (ENSODEG00000015425)	ENSODEG00000013541	GLRX (ENSODEG00000013777)	ELL2 (ENSODEG00000013813)	PCSK1 (ENSODEG00000013059)	ERAP1 (ENSODEG00000013297)	LNPEP (ENSODEG00000014263)	LIX1 (ENSODEG00000014038)	ENSODEG00000020047	ENSODEG00000012676	ENSODEG00000012940 #22	ENSODEG00000013445	RGMB (ENSODEG00000013893)	CHD1 (ENSODEG00000013090)	ENSODEG00000014055	ST8SIA4 (ENSODEG00000012997)	ENSODEG00000012701	ENSODEG00000020256	PAM (ENSODEG00000014808)	GIN1 (ENSODEG00000014540)	PPIP5K2 (ENSODEG00000012976)	MACIR (ENSODEG00000013882)	ENSODEG00000013039	NUDT12 (ENSODEG00000012673)	ENSODEG00000012978	ENSODEG00000020022
Long-tailed chinchilla	MODERN SPECIES	158	IFI35 (ENSCLAG00000016565) #7	RPL27 (ENSCLAG00000016219) #8	RUNDC1 (ENSCLAG00000015602) #9	PTGES3L (ENSCLAG00000016635) #10	AARSD1 (ENSCLAG00000016486) #11	ENSCLAG00000018072	G6PC1 (ENSCLAG00000016018) #12	AOC3 (ENSCLAG00000016573) #13	PSME3 (ENSCLAG00000016528) #15	BECN1 (ENSCLAG00000014888) #16	CNTD1 (ENSCLAG00000016092) #17	COA3 (ENSCLAG00000015591) #18	WNK4 (ENSCLAG00000016166) #19	VPS25 (ENSCLAG00000016527) #20	RAMP2 (ENSCLAG00000015276) #21	EZH1 (ENSCLAG00000016299) #22	CNTNAP1 (ENSCLAG00000014690) #24	CCR10 (ENSCLAG00000014760) #23	PLEKHH3 (ENSCLAG00000015237) #25	TUBG1 (ENSCLAG00000015846) #26	RETREG3 (ENSCLAG00000016186) #28	PSMC3IP (ENSCLAG00000015875) #29	MLX (ENSCLAG00000017140) #30	COASY (ENSCLAG00000016171) #31	HSD17B1 (ENSCLAG00000016130) #32	NAGLU (ENSCLAG00000016699) #33	ATP6V0A1 (ENSCLAG00000016413) #34	CAVIN1 (ENSCLAG00000016470) #35	STAT3 (ENSCLAG00000014721) #36	ENSCLAG00000016243 ##37	ENSCLAG00000016318 ##37
Guinea pig	MODERN SPECIES	53	VAT1 (ENSCPOG00000025673)	IFI35 (ENSCPOG00000003915) #7	ENSCPOG00000027359 ##8	RUNDC1 (ENSCPOG00000035890) #9	PTGES3L (ENSCPOG00000006792) #10	AARSD1 (ENSCPOG00000030193) #11	G6PC1 (ENSCPOG00000013409) #12	AOC3 (ENSCPOG00000012559) #13	PSME3 (ENSCPOG00000012552) #15	BECN1 (ENSCPOG00000012547) #16	CNTD1 (ENSCPOG00000012545) #17	COA3 (ENSCPOG00000022659) #18	WNK4 (ENSCPOG00000035356) #19	VPS25 (ENSCPOG00000012538) #20	RAMP2 (ENSCPOG00000034336) #21	EZH1 (ENSCPOG00000012533) #22	CNTNAP1 (ENSCPOG00000008851) #24	CCR10 (ENSCPOG00000008847) #23	PLEKHH3 (ENSCPOG00000010080) #25	TUBG2 (ENSCPOG00000008842)	TUBG1 (ENSCPOG00000033099) #26	RETREG3 (ENSCPOG00000002844) #28	PSMC3IP (ENSCPOG00000022571) #29	MLX (ENSCPOG00000035377) #30	COASY (ENSCPOG00000006117) #31	HSD17B1 (ENSCPOG00000021970) #32	NAGLU (ENSCPOG00000010613) #33	ATP6V0A1 (ENSCPOG00000011417) #34	CAVIN1 (ENSCPOG00000036454) #35	STAT3 (ENSCPOG00000007939) #36	ENSCPOG00000012203 ##37
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000034738 ##8	RUNDC1 (ENSHGLG00000014121) #9	ENSHGLG00000014337 #10	ENSHGLG00000046073 #11	ENSHGLG00000033874	G6PC1 (ENSHGLG00000009732) #12	ENSHGLG00000037349 #13	AOC3 (ENSHGLG00000010734) #13	PSME3 (ENSHGLG00000013508) #15	BECN1 (ENSHGLG00000017981) #16	CNTD1 (ENSHGLG00000037081) #17	COA3 (ENSHGLG00000031975) #18	WNK4 (ENSHGLG00000014338) #19	VPS25 (ENSHGLG00000018591) #20	RAMP2 (ENSHGLG00000040881) #21	ENSHGLG00000010367 #22	CNTNAP1 (ENSHGLG00000018356) #24	CCR10 (ENSHGLG00000011006) #23	PLEKHH3 (ENSHGLG00000035935) #25	TUBG2 (ENSHGLG00000011925)	TUBG1 (ENSHGLG00000012574) #26	RETREG3 (ENSHGLG00000011981) #28	ENSHGLG00000013066 #29	MLX (ENSHGLG00000014995) #30	COASY (ENSHGLG00000012414) #31	NAGLU (ENSHGLG00000011489) #33	ATP6V0A1 (ENSHGLG00000018815) #34	CAVIN1 (ENSHGLG00000018343) #35	STAT3 (ENSHGLG00000010906) #36	ENSHGLG00000012522 ##37	ENSHGLG00000037543
Naked mole-rat female	MODERN SPECIES	11	MAPK6 (ENSHGLG00000018577)	LEO1 (ENSHGLG00000017678)	TMOD3 (ENSHGLG00000016880)	ENSHGLG00000034762	ENSHGLG00000040154	TMOD2 (ENSHGLG00000018596)	ENSHGLG00000014402	SCG3 (ENSHGLG00000019449)	ENSHGLG00000042917	DMXL2 (ENSHGLG00000013835)	ENSHGLG00000048687	ENSHGLG00000032423	ENSHGLG00000048240	ENSHGLG00000040863	ENSHGLG00000033126	ENSHGLG00000000528 #22	ENSHGLG00000002448	SCFD1 (ENSHGLG00000002694)	G2E3 (ENSHGLG00000001901)	ENSHGLG00000040265	ENSHGLG00000003134	ENSHGLG00000020158	ENSHGLG00000002139	Ftl (ENSHGLG00000033017)	ENSHGLG00000043768	ENSHGLG00000000491	ENSHGLG00000002548	NOVA1 (ENSHGLG00000046120)	ENSHGLG00000048483	STXBP6 (ENSHGLG00000049108)	GZMB (ENSHGLG00000002596)
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Muroidea	ANCESTRAL SPECIES		ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a.r #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00390000010721.b ##8	ENSGT00390000007311 #9	ENSGT00940000156241.d #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a.r #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Prairie vole	MODERN SPECIES	127	Vat1 (ENSMOCG00000014418)	Ifi35 (ENSMOCG00000005324) #7	ENSMOCG00000007320 ##8	Rundc1 (ENSMOCG00000011131) #9	ENSMOCG00000008732 #11	G6pc (ENSMOCG00000002126) #12	Aoc3 (ENSMOCG00000016609) #13	Aoc2 (ENSMOCG00000018362) #14	ENSMOCG00000002970 #15	Becn1 (ENSMOCG00000010684) #16	Cntd1 (ENSMOCG00000007350) #17	ENSMOCG00000021678 #18	Wnk4 (ENSMOCG00000016124) #19	Vps25 (ENSMOCG00000018897) #20	Ramp2 (ENSMOCG00000014445) #21	Ezh1 (ENSMOCG00000021032) #22	Cntnap1 (ENSMOCG00000006883) #24	Ccr10 (ENSMOCG00000009310) #23	Plekhh3 (ENSMOCG00000006637) #25	Tubg2 (ENSMOCG00000002587)	Tubg1 (ENSMOCG00000018346) #26	Retreg3 (ENSMOCG00000000335) #28	Psmc3ip (ENSMOCG00000017934) #29	Mlx (ENSMOCG00000018860) #30	Coasy (ENSMOCG00000012906) #31	Hsd17b1 (ENSMOCG00000021088) #32	Naglu (ENSMOCG00000004738) #33	Atp6v0a1 (ENSMOCG00000003199) #34	Cavin1 (ENSMOCG00000008907) #35	Stat3 (ENSMOCG00000011223) #36	Stat5a (ENSMOCG00000000170) #37
Northern American deer mouse	MODERN SPECIES	21	Vat1 (ENSPEMG00000014460)	Ifi35 (ENSPEMG00000015956) #7	Rpl27 (ENSPEMG00000015793) #8	Ptges3l (ENSPEMG00000025704) #10	Aarsd1 (ENSPEMG00000018495) #11	G6pc (ENSPEMG00000025140) #12	Aoc3 (ENSPEMG00000012019) #13	Aoc2 (ENSPEMG00000018257) #14	Psme3 (ENSPEMG00000013099) #15	ENSPEMG00000027472	Cntd1 (ENSPEMG00000007328) #17	Coa3 (ENSPEMG00000019006) #18	Wnk4 (ENSPEMG00000011882) #19	Vps25 (ENSPEMG00000011669) #20	Ramp2 (ENSPEMG00000017016) #21	Ezh1 (ENSPEMG00000003694) #22	Cntnap1 (ENSPEMG00000011417) #24	Ccr10 (ENSPEMG00000012066) #23	Plekhh3 (ENSPEMG00000011634) #25	Tubg2 (ENSPEMG00000026832)	Tubg1 (ENSPEMG00000027277) #26	Retreg3 (ENSPEMG00000013772) #28	Psmc3ip (ENSPEMG00000017694) #29	Mlx (ENSPEMG00000015965) #30	Coasy (ENSPEMG00000012437) #31	Hsd17b1 (ENSPEMG00000010252) #32	Naglu (ENSPEMG00000000599) #33	Atp6v0a1 (ENSPEMG00000004552) #34	Cavin1 (ENSPEMG00000027244) #35	Stat3 (ENSPEMG00000015860) #36	Stat5a (ENSPEMG00000015265) #37
Cricetinae	ANCESTRAL SPECIES		ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a.r #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Chinese hamster chok1gshd	MODERN SPECIES	33	Ifi35 (ENSCGRG00001021496) #7	Rpl27 (ENSCGRG00001009360) #8	Rundc1 (ENSCGRG00001002613) #9	Ptges3l (ENSCGRG00001012880) #10	Aarsd1 (ENSCGRG00001022384) #11	G6pc (ENSCGRG00001019078) #12	Aoc3 (ENSCGRG00001017577) #13	Aoc2 (ENSCGRG00001018276) #14	ENSCGRG00001014333 #15	Becn1 (ENSCGRG00001019061) #16	Cntd1 (ENSCGRG00001014932) #17	Coa3 (ENSCGRG00001024599) #18	Wnk4 (ENSCGRG00001013436) #19	Vps25 (ENSCGRG00001015636) #20	Ramp2 (ENSCGRG00001006427) #21	Ezh1 (ENSCGRG00001004522) #22	Cntnap1 (ENSCGRG00001023354) #24	Ccr10 (ENSCGRG00001000112) #23	Plekhh3 (ENSCGRG00001016828) #25	Tubg2 (ENSCGRG00001018359)	ENSCGRG00001012361	Tubg1 (ENSCGRG00001001818) #26	Retreg3 (ENSCGRG00001011912) #28	Psmc3ip (ENSCGRG00001017004) #29	Mlx (ENSCGRG00001011276) #30	Coasy (ENSCGRG00001017604) #31	Hsd17b1 (ENSCGRG00001014185) #32	Naglu (ENSCGRG00001003319) #33	Atp6v0a1 (ENSCGRG00001012097) #34	Cavin1 (ENSCGRG00001017248) #35	Stat3 (ENSCGRG00001013136) #36
Golden Hamster	MODERN SPECIES	637	Vat1 (ENSMAUG00000009868)	Ifi35 (ENSMAUG00000005220) #7	ENSMAUG00000001893 ##8	Rundc1 (ENSMAUG00000002813) #9	Aarsd1 (ENSMAUG00000022119) #11	G6pc (ENSMAUG00000002100) #12	Aoc3 (ENSMAUG00000010190) #13	Aoc2 (ENSMAUG00000012093) #14	ENSMAUG00000015391 #15	Becn1 (ENSMAUG00000006456) #16	Cntd1 (ENSMAUG00000004231) #17	Coa3 (ENSMAUG00000004848) #18	ENSMAUG00000015779 #19	Vps25 (ENSMAUG00000010604) #20	Ramp2 (ENSMAUG00000011606) #21	Ezh1 (ENSMAUG00000007995) #22	Cntnap1 (ENSMAUG00000006051) #24	Ccr10 (ENSMAUG00000004499) #23	Plekhh3 (ENSMAUG00000006250) #25	Tubg2 (ENSMAUG00000007524)	ENSMAUG00000012912	Psmc3ip (ENSMAUG00000022262) #29	Mlx (ENSMAUG00000010872) #30	Coasy (ENSMAUG00000015007) #31	Hsd17b1 (ENSMAUG00000002759) #32	Naglu (ENSMAUG00000001292) #33	Atp6v0a1 (ENSMAUG00000002684) #34	Cavin1 (ENSMAUG00000011774) #35	Stat3 (ENSMAUG00000008769) #36	ENSMAUG00000006283 #37
Murinae	ANCESTRAL SPECIES	6	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00940000156241.d #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Mus	ANCESTRAL SPECIES	2	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00940000156241.d #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00940000156241.d #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00940000156241.d #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Mus_C	ANCESTRAL SPECIES	21	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241.c #11	ENSGT00940000156241.d #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Steppe mouse	MODERN SPECIES	2847	ENSMSIG00000007148 #7	ENSMSIG00000007112 ##8	Rundc1 (ENSMSIG00000007077) #9	Ptges3l (ENSMSIG00000006996) #10	Aarsd1 (ENSMSIG00000006957) #11	G6pc (ENSMSIG00000006929) #12	ENSMSIG00000006922	Aoc3 (ENSMSIG00000006909) #13	ENSMSIG00000006866 #15	Becn1 (ENSMSIG00000006806) #16	Cntd1 (ENSMSIG00000006732) #17	Coa3 (ENSMSIG00000006709) #18	Wnk4 (ENSMSIG00000006627) #19	ENSMSIG00000006515 #20	Ramp2 (ENSMSIG00000006478) #21	Ezh1 (ENSMSIG00000006338) #22	Cntnap1 (ENSMSIG00000006209) #24	Ccr10 (ENSMSIG00000006184) #23	Plekhh3 (ENSMSIG00000006136) #25	Tubg2 (ENSMSIG00000006006)	Retreg3 (ENSMSIG00000005954) #28	Psmc3ip (ENSMSIG00000005936) #29	Mlx (ENSMSIG00000005831) #30	Coasy (ENSMSIG00000005785) #31	Hsd17b1 (ENSMSIG00000005773) #32	Naglu (ENSMSIG00000005762) #33	Atp6v0a1 (ENSMSIG00000005378) #34	Cavin1 (ENSMSIG00000005346) #35	Stat3 (ENSMSIG00000005159) #36	Stat5a (ENSMSIG00000004929) #37	Stat5b (ENSMSIG00000004812) ##37
spretus	MODERN SPECIES	2	Rpl27 (MGP_SPRETEiJ_G0018062) #8	Rundc1 (MGP_SPRETEiJ_G0018061) #9	Ptges3l (MGP_SPRETEiJ_G0018060) #10	Aarsd1 (MGP_SPRETEiJ_G0018059) #11	MGP_SPRETEiJ_G0018058 #11	G6pc (MGP_SPRETEiJ_G0018057) #12	Aoc3 (MGP_SPRETEiJ_G0018056) #13	Aoc2 (MGP_SPRETEiJ_G0018055) #14	Psme3 (MGP_SPRETEiJ_G0018054) #15	Becn1 (MGP_SPRETEiJ_G0018053) #16	Cntd1 (MGP_SPRETEiJ_G0018052) #17	Coa3 (MGP_SPRETEiJ_G0018051) #18	Wnk4 (MGP_SPRETEiJ_G0018050) #19	Vps25 (MGP_SPRETEiJ_G0018049) #20	Ramp2 (MGP_SPRETEiJ_G0018048) #21	Ezh1 (MGP_SPRETEiJ_G0018047) #22	Ccr10 (MGP_SPRETEiJ_G0018046) #23	Cntnap1 (MGP_SPRETEiJ_G0018045) #24	Plekhh3 (MGP_SPRETEiJ_G0018044) #25	MGP_SPRETEiJ_G0018043	MGP_SPRETEiJ_G0018042 #26	Retreg3 (MGP_SPRETEiJ_G0018041) #28	Psmc3ip (MGP_SPRETEiJ_G0018040) #29	Mlx (MGP_SPRETEiJ_G0018039) #30	Coasy (MGP_SPRETEiJ_G0018038) #31	Hsd17b1 (MGP_SPRETEiJ_G0018037) #32	Naglu (MGP_SPRETEiJ_G0018036) #33	Atp6v0a1 (MGP_SPRETEiJ_G0018035) #34	Cavin1 (MGP_SPRETEiJ_G0018034) #35	Stat3 (MGP_SPRETEiJ_G0018033) #36	MGP_SPRETEiJ_G0018032 #37
Mouse	MODERN SPECIES	2	Rpl27 (ENSMUSG00000063316) #8	Rundc1 (ENSMUSG00000035007) #9	Ptges3l (ENSMUSG00000097487) #10	Aarsd1 (ENSMUSG00000075528) #11	Gm27029 (ENSMUSG00000097239)	G6pc (ENSMUSG00000078650) #12	Aoc3 (ENSMUSG00000019326) #13	Aoc2 (ENSMUSG00000078651) #14	Psme3 (ENSMUSG00000078652) #15	Becn1 (ENSMUSG00000035086) #16	Cntd1 (ENSMUSG00000078653) #17	Coa3 (ENSMUSG00000017188) #18	Wnk4 (ENSMUSG00000035112) #19	Vps25 (ENSMUSG00000078656) #20	Ramp2 (ENSMUSG00000001240) #21	Ezh1 (ENSMUSG00000006920) #22	Ccr10 (ENSMUSG00000044052) #23	Cntnap1 (ENSMUSG00000017167) #24	Plekhh3 (ENSMUSG00000035172) #25	Tubg2 (ENSMUSG00000045007)	Tubg1 (ENSMUSG00000035198) #26	Retreg3 (ENSMUSG00000017802) #28	Psmc3ip (ENSMUSG00000019303) #29	Mlx (ENSMUSG00000017801) #30	Coasy (ENSMUSG00000001755) #31	Hsd17b1 (ENSMUSG00000019301) #32	Naglu (ENSMUSG00000001751) #33	Atp6v0a1 (ENSMUSG00000019302) #34	Cavin1 (ENSMUSG00000004044) #35	Stat3 (ENSMUSG00000004040) #36	Stat5a (ENSMUSG00000004043) #37
Ryukyu mouse	MODERN SPECIES	2	Rpl27 (MGP_CAROLIEiJ_G0017219) #8	Rundc1 (MGP_CAROLIEiJ_G0017218) #9	Ptges3l (MGP_CAROLIEiJ_G0017217) #10	Aarsd1 (MGP_CAROLIEiJ_G0017216) #11	MGP_CAROLIEiJ_G0017215 #11	G6pc (MGP_CAROLIEiJ_G0017214) #12	Aoc3 (MGP_CAROLIEiJ_G0017213) #13	Aoc2 (MGP_CAROLIEiJ_G0017212) #14	Psme3 (MGP_CAROLIEiJ_G0017211) #15	Becn1 (MGP_CAROLIEiJ_G0017210) #16	Cntd1 (MGP_CAROLIEiJ_G0017209) #17	Coa3 (MGP_CAROLIEiJ_G0017208) #18	Wnk4 (MGP_CAROLIEiJ_G0017207) #19	Vps25 (MGP_CAROLIEiJ_G0017206) #20	Ramp2 (MGP_CAROLIEiJ_G0017205) #21	Ezh1 (MGP_CAROLIEiJ_G0017204) #22	Ccr10 (MGP_CAROLIEiJ_G0017203) #23	Cntnap1 (MGP_CAROLIEiJ_G0017202) #24	Plekhh3 (MGP_CAROLIEiJ_G0017201) #25	Tubg2 (MGP_CAROLIEiJ_G0017200)	Tubg1 (MGP_CAROLIEiJ_G0017199) #26	Retreg3 (MGP_CAROLIEiJ_G0017198) #28	Psmc3ip (MGP_CAROLIEiJ_G0017197) #29	Mlx (MGP_CAROLIEiJ_G0017196) #30	Coasy (MGP_CAROLIEiJ_G0017195) #31	Hsd17b1 (MGP_CAROLIEiJ_G0017194) #32	Naglu (MGP_CAROLIEiJ_G0017193) #33	Atp6v0a1 (MGP_CAROLIEiJ_G0017192) #34	Cavin1 (MGP_CAROLIEiJ_G0017191) #35	Stat3 (MGP_CAROLIEiJ_G0017190) #36	Stat5a (MGP_CAROLIEiJ_G0017189) #37
Shrew mouse	MODERN SPECIES	5	Rpl27 (MGP_PahariEiJ_G0018349) #8	Rundc1 (MGP_PahariEiJ_G0018348) #9	Ptges3l (MGP_PahariEiJ_G0018347) #10	Aarsd1 (MGP_PahariEiJ_G0018346) #11	MGP_PahariEiJ_G0018345 #11	G6pc (MGP_PahariEiJ_G0018344) #12	Aoc3 (MGP_PahariEiJ_G0018343) #13	Aoc2 (MGP_PahariEiJ_G0018342) #14	Psme3 (MGP_PahariEiJ_G0018341) #15	Becn1 (MGP_PahariEiJ_G0018340) #16	Cntd1 (MGP_PahariEiJ_G0018339) #17	Coa3 (MGP_PahariEiJ_G0018338) #18	Wnk4 (MGP_PahariEiJ_G0018337) #19	Vps25 (MGP_PahariEiJ_G0018336) #20	Ramp2 (MGP_PahariEiJ_G0018335) #21	Ezh1 (MGP_PahariEiJ_G0018334) #22	Ccr10 (MGP_PahariEiJ_G0018333) #23	Cntnap1 (MGP_PahariEiJ_G0018332) #24	Plekhh3 (MGP_PahariEiJ_G0018331) #25	Tubg2 (MGP_PahariEiJ_G0018330)	Tubg1 (MGP_PahariEiJ_G0018329) #26	Retreg3 (MGP_PahariEiJ_G0018328) #28	Psmc3ip (MGP_PahariEiJ_G0018327) #29	MGP_PahariEiJ_G0018326 #30	Coasy (MGP_PahariEiJ_G0018325) #31	Hsd17b1 (MGP_PahariEiJ_G0018324) #32	Naglu (MGP_PahariEiJ_G0018323) #33	Atp6v0a1 (MGP_PahariEiJ_G0018322) #34	Cavin1 (MGP_PahariEiJ_G0018321) #35	Stat3 (MGP_PahariEiJ_G0018320) #36	MGP_PahariEiJ_G0018319 #37
Rat	MODERN SPECIES	1	Tmem106a (ENSRNOG00000023628)	Nbr1 (ENSRNOG00000020730)	Brca1 (ENSRNOG00000020701)	Rnd2 (ENSRNOG00000020698)	Vat1 (ENSRNOG00000020684)	Ifi35 (ENSRNOG00000020678) #7	Rpl27 (ENSRNOG00000020674) #8	Rundc1 (ENSRNOG00000023768) #9	Ptges3l (ENSRNOG00000050347) #10	Aarsd1 (ENSRNOG00000020658) #11	G6pc1 (ENSRNOG00000053448) #13	Becn1 (ENSRNOG00000020513) #16	Coa3 (ENSRNOG00000020487) #18	Atp5mk-ps2 (ENSRNOG00000067471)	Vps25 (ENSRNOG00000020441) #19	Ezh1 (ENSRNOG00000020336) #22	Cntnap1 (ENSRNOG00000020277) #24	Ccr10 (ENSRNOG00000020275) #23	Plekhh3 (ENSRNOG00000020238) #25	Tubg2 (ENSRNOG00000006494)	Tubg1 (ENSRNOG00000020213) #26	Retreg3 (ENSRNOG00000020056) #28	Psmc3ip (ENSRNOG00000020022) #29	Mlx (ENSRNOG00000019983) #30	Coasy (ENSRNOG00000019918) #31	Hsd17b1 (ENSRNOG00000019830) #32	Naglu (ENSRNOG00000032381) #33	Atp6v0a1 (ENSRNOG00000036814) #34	Cavin1 (ENSRNOG00000019778) #35	Stat3 (ENSRNOG00000019742) #36	Stat5a (ENSRNOG00000019496) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	912	ENSNGAG00000018509 #8	Rundc1 (ENSNGAG00000011441) #9	ENSNGAG00000018697	Ptges3l (ENSNGAG00000015920) #10	Aarsd1 (ENSNGAG00000010786) #11	G6pc (ENSNGAG00000000379) #12	Aoc3 (ENSNGAG00000012544) #13	Aoc2 (ENSNGAG00000019887) #14	Psme3 (ENSNGAG00000005238) #15	Becn1 (ENSNGAG00000002226) #16	Cntd1 (ENSNGAG00000013614) #17	Coa3 (ENSNGAG00000011157) #18	Wnk4 (ENSNGAG00000013456) #19	Vps25 (ENSNGAG00000015305) #20	Ramp2 (ENSNGAG00000016874) #21	Ezh1 (ENSNGAG00000012173) #22	Cntnap1 (ENSNGAG00000009133) #24	Ccr10 (ENSNGAG00000020372) #23	Plekhh3 (ENSNGAG00000020821) #25	Tubg2 (ENSNGAG00000004427)	Tubg1 (ENSNGAG00000014805) #26	Retreg3 (ENSNGAG00000014675) #28	Psmc3ip (ENSNGAG00000014927) #29	Mlx (ENSNGAG00000011307) #30	Coasy (ENSNGAG00000011553) #31	Hsd17b1 (ENSNGAG00000011336) #32	Naglu (ENSNGAG00000001778) #33	Atp6v0a1 (ENSNGAG00000019015) #34	Cavin1 (ENSNGAG00000016373) #35	Stat3 (ENSNGAG00000002384) #36	Stat5a (ENSNGAG00000017098) #37
Lesser Egyptian jerboa	MODERN SPECIES	56	Ifi35 (ENSJJAG00000021421) #7	Rpl27 (ENSJJAG00000018753) #8	Rundc1 (ENSJJAG00000021046) #9	Ptges3l (ENSJJAG00000021873) #10	ENSJJAG00000022115	G6pc (ENSJJAG00000019877) #12	Aoc3 (ENSJJAG00000018905) #13	Aoc2 (ENSJJAG00000020667) #14	ENSJJAG00000020691 #15	Becn1 (ENSJJAG00000021753) #16	Cntd1 (ENSJJAG00000019888) #17	Coa3 (ENSJJAG00000020968) #18	Wnk4 (ENSJJAG00000021799) #19	Vps25 (ENSJJAG00000001505) #20	ENSJJAG00000021892 #21	Ezh1 (ENSJJAG00000020580) #22	Cntnap1 (ENSJJAG00000003810) #24	Ccr10 (ENSJJAG00000021031) #23	Plekhh3 (ENSJJAG00000021329) #25	Tubg2 (ENSJJAG00000022182)	Tubg1 (ENSJJAG00000020643) #26	Retreg3 (ENSJJAG00000021144) #28	ENSJJAG00000021293 #29	Mlx (ENSJJAG00000021305) #30	Coasy (ENSJJAG00000021057) #31	Hsd17b1 (ENSJJAG00000020824) #32	Naglu (ENSJJAG00000020839) #33	Atp6v0a1 (ENSJJAG00000023112) #34	Cavin1 (ENSJJAG00000020868) #35	Stat3 (ENSJJAG00000023580) #36	Stat5a (ENSJJAG00000020911) #37
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES																	ENSDORG00000025866 #22
Kangaroo rat	MODERN SPECIES	326							G6pc (ENSDORG00000014392) #12	Aoc3 (ENSDORG00000000961) #13	Psme3 (ENSDORG00000000958) #15	Becn1 (ENSDORG00000000956) #16	Cntd1 (ENSDORG00000000954) #17	Coa3 (ENSDORG00000000953) #18	Wnk4 (ENSDORG00000000951) #19	ENSDORG00000000950 #20	ENSDORG00000027443 #21	Ezh1 (ENSDORG00000016404) #22	Cntnap1 (ENSDORG00000016403) #24	Ccr10 (ENSDORG00000016402) #23	Plekhh3 (ENSDORG00000016401) #25	Tubg1 (ENSDORG00000006534) #26	Retreg3 (ENSDORG00000006535) #28	Psmc3ip (ENSDORG00000006537) #29	Mlx (ENSDORG00000006540) #30	Coasy (ENSDORG00000006542) #31	Hsd17b1 (ENSDORG00000006544) #32	Naglu (ENSDORG00000006547) #33	Atp6v0a1 (ENSDORG00000013402) #34	ENSDORG00000028466 ##34	Cavin1 (ENSDORG00000024770) #35	Stat3 (ENSDORG00000000308) #36	Stat5a (ENSDORG00000000303) #37
Lagomorpha	ANCESTRAL SPECIES		ENSGT00530000063686.b #7	ENSGT00390000010721.a.b #8	ENSGT00390000007311 #9	ENSGT00940000163448 #10	ENSGT00940000156241 #11	ENSGT00950000183150.a.a #12	ENSGT00950000183207.b.e #13	ENSGT00950000183207.b.f #14	ENSGT00950000183098.a #15	ENSGT00390000008164.c #16	ENSGT00440000033966 #17	ENSGT00390000016262 #18	ENSGT00940000159871 #19	ENSGT00390000014892 #20	ENSGT00940000160264 #21	ENSGT00940000156604 #22	ENSGT00940000160825 #24	ENSGT01030000234667.a.a.a.a.a #23	ENSGT00940000159764 #25	ENSGT00940000162499	ENSGT00940000156957 #26	ENSGT00940000161349 #28	ENSGT00390000006890 #29	ENSGT00940000157377 #30	ENSGT00550000075078 #31	ENSGT00940000160415 #32	ENSGT00390000005900 #33	ENSGT00950000182881.a.a.b #34	ENSGT00950000182910.b #35	ENSGT01050000244905.B #36	ENSGT01080000257420.C.b.b.a.a #37
Rabbit	MODERN SPECIES	10	ENSOCUG00000003874 #7	ENSOCUG00000003872 #8	RUNDC1 (ENSOCUG00000009268) #9	PTGES3L (ENSOCUG00000029390) #10	AARSD1 (ENSOCUG00000009259) #11	G6PC1 (ENSOCUG00000016018) #12	AOC3 (ENSOCUG00000033151) #13	AOC2 (ENSOCUG00000015997) #14	PSME3 (ENSOCUG00000015986) #15	ENSOCUG00000015964 #16	CNTD1 (ENSOCUG00000037401) #17	COA3 (ENSOCUG00000015948) #18	WNK4 (ENSOCUG00000015928) #19	VPS25 (ENSOCUG00000034593) #20	RAMP2 (ENSOCUG00000023670) #21	EZH1 (ENSOCUG00000006045) #22	CNTNAP1 (ENSOCUG00000007327) #24	CCR10 (ENSOCUG00000023791) #23	PLEKHH3 (ENSOCUG00000021704) #25	TUBG1 (ENSOCUG00000015260) #26	RETREG3 (ENSOCUG00000015226) #28	PSMC3IP (ENSOCUG00000015214) #29	MLX (ENSOCUG00000015210) #30	COASY (ENSOCUG00000015195) #31	ENSOCUG00000022009 #32	NAGLU (ENSOCUG00000000581) #33	ATP6V0A1 (ENSOCUG00000015169) #34	ENSOCUG00000026764 #35	STAT3 (ENSOCUG00000011034) #36	STAT5A (ENSOCUG00000023066) #37	STAT5B (ENSOCUG00000005078) ##37
Pika	MODERN SPECIES	2345							AARSD1 (ENSOPRG00000012708) #11	G6PC1 (ENSOPRG00000012698) #12	ENSOPRG00000012685 #13	PSME3 (ENSOPRG00000012644) #15	BECN1 (ENSOPRG00000012626) #16	CNTD1 (ENSOPRG00000012619) #17	COA3 (ENSOPRG00000012613) #18	WNK4 (ENSOPRG00000012585) #19	VPS25 (ENSOPRG00000012574) #20	EZH1 (ENSOPRG00000012543) #22	CNTNAP1 (ENSOPRG00000012512) #24	CCR10 (ENSOPRG00000012509) #23	PLEKHH3 (ENSOPRG00000012493) #25	TUBG2 (ENSOPRG00000012479)	ENSOPRG00000012471
Tree shrew	MODERN SPECIES	2853					ENSTBEG00000010357	ENSTBEG00000010344	ENSTBEG00000010187 #13	AOC2 (ENSTBEG00000009986) #14	PSME3 (ENSTBEG00000009849) #15	BECN1 (ENSTBEG00000017637) #16	CNTD1 (ENSTBEG00000017514) #17	COA3 (ENSTBEG00000017499) #18	ENSTBEG00000017346 #19	VPS25 (ENSTBEG00000017169) #20	RAMP2 (ENSTBEG00000017001) #21	EZH1 (ENSTBEG00000016721) #22	CNTNAP1 (ENSTBEG00000016342) #24	PLEKHH3 (ENSTBEG00000016135) #25	TUBG2 (ENSTBEG00000015001)