Glires ANCESTRAL SPECIES 3 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT01090000261778 ENSGT00910000148790 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Rodentia ANCESTRAL SPECIES 4 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT01090000261778 ENSGT00910000148790 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Rodentia_B ANCESTRAL SPECIES 1 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Kangaroo rat MODERN SPECIES 326 Car10 (ENSDORG00000011701) #7 ENSDORG00000029230 #8 Tom1l1 (ENSDORG00000001206) #9 Stxbp4 (ENSDORG00000015457) #10 Hlf (ENSDORG00000026285) #11 Mmd (ENSDORG00000026049) #12 Tmem100 (ENSDORG00000028016) #13 Pctp (ENSDORG00000012691) #14 Ankfn1 (ENSDORG00000007824) #15 ENSDORG00000028536 #16 Nog (ENSDORG00000029051) #17 Gm525 (ENSDORG00000000733) #18 Dgke (ENSDORG00000004135) #19 Trim25 (ENSDORG00000012159) #20 Coil (ENSDORG00000027289) #21 Scpep1 (ENSDORG00000003013) #22 Akap1 (ENSDORG00000030157) #23 ENSDORG00000028440 #24 ENSDORG00000005394 #25 Ccdc182 (ENSDORG00000005396) #26 Mrps23 (ENSDORG00000026921) #27 Cuedc1 (ENSDORG00000012960) #28 Vezf1 (ENSDORG00000023466) #29 Srsf1 (ENSDORG00000015082) #30 Dynll2 (ENSDORG00000025624) #31 ENSDORG00000026736 #32 Gprc5c (ENSDORG00000005420) #33 Gpr142 (ENSDORG00000003063) #34 Btbd17 (ENSDORG00000030071) #35 Kif19a (ENSDORG00000019849) #36 ENSDORG00000003288 #37 Myomorpha ANCESTRAL SPECIES ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Muroidea ANCESTRAL SPECIES ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 Cricetidae ANCESTRAL SPECIES ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 Cricetinae ANCESTRAL SPECIES ENSGT00940000163180 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 Chinese hamster chok1gshd MODERN SPECIES 33 Cox11 (ENSCGRG00001011330) Stxbp4 (ENSCGRG00001023598) #10 Hlf (ENSCGRG00001013188) #11 Mmd (ENSCGRG00001021487) #12 ENSCGRG00001000174 ENSCGRG00001011423 Tmem100 (ENSCGRG00001011394) #13 Pctp (ENSCGRG00001015293) #14 Ankfn1 (ENSCGRG00001009369) #15 ENSCGRG00001020352 #16 Nog (ENSCGRG00001001979) #17 Gm525 (ENSCGRG00001017334) #18 Dgke (ENSCGRG00001000768) #19 Trim25 (ENSCGRG00001014623) #20 Coil (ENSCGRG00001012212) #21 Scpep1 (ENSCGRG00001000212) #22 Akap1 (ENSCGRG00001005318) #23 ENSCGRG00001010274 Msi2 (ENSCGRG00001013330) #24 Ccdc182 (ENSCGRG00001011932) #26 Mrps23 (ENSCGRG00001000359) #27 Cuedc1 (ENSCGRG00001006560) #28 Vezf1 (ENSCGRG00001015390) #29 Srsf1 (ENSCGRG00001000670) #30 Dynll2 (ENSCGRG00001021820) #31 Or4d1 (ENSCGRG00001011576) ENSCGRG00001000799 Or4d2 (ENSCGRG00001001106) Or4d2b (ENSCGRG00001012178) Epx (ENSCGRG00001000483) Mks1 (ENSCGRG00001007658) Cricetidae_B ANCESTRAL SPECIES ENSGT00940000163180 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 Prairie vole MODERN SPECIES 15 Kif2b (ENSMOCG00000002849) Tom1l1 (ENSMOCG00000004415) #9 ENSMOCG00000006989 Stxbp4 (ENSMOCG00000014715) #10 Hlf (ENSMOCG00000002111) #11 Mmd (ENSMOCG00000011224) #12 Tmem100 (ENSMOCG00000021604) #13 Pctp (ENSMOCG00000021810) #14 Ankfn1 (ENSMOCG00000002064) #15 ENSMOCG00000005282 #16 Nog (ENSMOCG00000003140) #17 Gm525 (ENSMOCG00000016021) #18 Dgke (ENSMOCG00000010320) #19 Trim25 (ENSMOCG00000003617) #20 Coil (ENSMOCG00000007272) #21 Scpep1 (ENSMOCG00000004511) #22 Akap1 (ENSMOCG00000010636) #23 Msi2 (ENSMOCG00000005820) #24 Ccdc182 (ENSMOCG00000002863) #26 Mrps23 (ENSMOCG00000019113) #27 Cuedc1 (ENSMOCG00000004705) #28 Vezf1 (ENSMOCG00000004930) #29 Srsf1 (ENSMOCG00000001996) #30 Dynll2 (ENSMOCG00000003654) #31 Or4d2 (ENSMOCG00000016085) Or4d2b (ENSMOCG00000002393) Epx (ENSMOCG00000022846) Mks1 (ENSMOCG00000004156) Lpo (ENSMOCG00000022975) Mpo (ENSMOCG00000022201) Tspoap1 (ENSMOCG00000019328) Northern American deer mouse MODERN SPECIES 21 Cox11 (ENSPEMG00000024142) Stxbp4 (ENSPEMG00000001411) #10 Hlf (ENSPEMG00000029046) #11 Mmd (ENSPEMG00000000328) #12 ENSPEMG00000027921 ENSPEMG00000000809 Tmem100 (ENSPEMG00000024664) #13 Pctp (ENSPEMG00000021820) #14 Ankfn1 (ENSPEMG00000022390) #15 ENSPEMG00000021517 #16 Nog (ENSPEMG00000003492) #17 Gm525 (ENSPEMG00000008898) #18 Dgke (ENSPEMG00000023280) #19 Trim25 (ENSPEMG00000022682) #20 Coil (ENSPEMG00000021428) #21 Scpep1 (ENSPEMG00000012655) #22 Akap1 (ENSPEMG00000023415) #23 Msi2 (ENSPEMG00000021793) #24 Ccdc182 (ENSPEMG00000027163) #26 Mrps23 (ENSPEMG00000016423) #27 Cuedc1 (ENSPEMG00000023605) #28 Vezf1 (ENSPEMG00000015718) #29 Srsf1 (ENSPEMG00000021416) #30 Dynll2 (ENSPEMG00000025500) #31 ENSPEMG00000009410 Or4d1 (ENSPEMG00000030737) Or4d2 (ENSPEMG00000028653) Or4d2b (ENSPEMG00000027910) Epx (ENSPEMG00000018626) Mks1 (ENSPEMG00000009465) ENSPEMG00000015337 Murinae ANCESTRAL SPECIES 6 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00390000018316.b.a.b.b ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 Mus ANCESTRAL SPECIES 2 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00390000018316.b.a.b.b ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000160240 #9 ENSGT00390000007512.q ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00390000018316.b.a.b.b.a.a.a ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000160240 #9 ENSGT00390000007512.q ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00390000018316.b.a.b.b.a.a.a ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000160240 #9 ENSGT00390000007512.q ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00390000018316.b.a.b.b.a.a.a ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a.x ENSGT00940000154503.a.w ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 spretus MODERN SPECIES 2 Kif2b (MGP_SPRETEiJ_G0017812) Tom1l1 (MGP_SPRETEiJ_G0017811) #9 Cox11 (MGP_SPRETEiJ_G0017810) Stxbp4 (MGP_SPRETEiJ_G0017809) #10 Hlf (MGP_SPRETEiJ_G0017808) #11 Mmd (MGP_SPRETEiJ_G0017807) #12 Tmem100 (MGP_SPRETEiJ_G0017806) #13 Pctp (MGP_SPRETEiJ_G0017805) #14 MGP_SPRETEiJ_G0017804 #15 MGP_SPRETEiJ_G0017803 #16 Nog (MGP_SPRETEiJ_G0017802) #17 Gm525 (MGP_SPRETEiJ_G0017801) #18 Dgke (MGP_SPRETEiJ_G0017800) #19 Trim25 (MGP_SPRETEiJ_G0017799) #20 Elobl (MGP_SPRETEiJ_G0017798) Scpep1 (MGP_SPRETEiJ_G0017797) #22 Akap1 (MGP_SPRETEiJ_G0017796) #23 Msi2 (MGP_SPRETEiJ_G0017795) #24 Ccdc182 (MGP_SPRETEiJ_G0017794) #26 Mrps23 (MGP_SPRETEiJ_G0017793) #27 Cuedc1 (MGP_SPRETEiJ_G0017792) #28 Vezf1 (MGP_SPRETEiJ_G0017791) #29 Srsf1 (MGP_SPRETEiJ_G0017790) #30 Dynll2 (MGP_SPRETEiJ_G0017789) #31 MGP_SPRETEiJ_G0017788 Epx (MGP_SPRETEiJ_G0017787) Mks1 (MGP_SPRETEiJ_G0017786) Lpo (MGP_SPRETEiJ_G0017785) Mpo (MGP_SPRETEiJ_G0017784) Tspoap1 (MGP_SPRETEiJ_G0017783) Supt4a (MGP_SPRETEiJ_G0017782) Steppe mouse MODERN SPECIES 2919 Scpep1 (ENSMSIG00000022666) #22 Akap1 (ENSMSIG00000022690) #23 Msi2 (ENSMSIG00000022787) #24 Ccdc182 (ENSMSIG00000022827) #26 Mrps23 (ENSMSIG00000022835) #27 Cuedc1 (ENSMSIG00000022862) #28 Vezf1 (ENSMSIG00000022871) #29 Srsf1 (ENSMSIG00000022893) #30 Dynll2 (ENSMSIG00000022934) #31 ENSMSIG00000022956 Mouse MODERN SPECIES 2 Tom1l1 (ENSMUSG00000020541) #9 Cox11 (ENSMUSG00000020544) Stxbp4 (ENSMUSG00000020546) #10 Hlf (ENSMUSG00000003949) #11 Mmd (ENSMUSG00000003948) #12 Smim36 (ENSMUSG00000110344) Tmem100 (ENSMUSG00000069763) #13 Pctp (ENSMUSG00000020553) #14 Ankfn1 (ENSMUSG00000047773) #15 Nog (ENSMUSG00000048616) #17 Gm525 (ENSMUSG00000072553) #18 Dgke (ENSMUSG00000000276) #19 Trim25 (ENSMUSG00000000275) #20 Coil (ENSMUSG00000033983) #21 Elobl (ENSMUSG00000057534) Scpep1 (ENSMUSG00000000278) #22 Akap1 (ENSMUSG00000018428) #23 Msi2 (ENSMUSG00000069769) #24 Ccdc182 (ENSMUSG00000034031) #26 Mrps23 (ENSMUSG00000023723) #27 Cuedc1 (ENSMUSG00000018378) #28 Vezf1 (ENSMUSG00000018377) #29 Srsf1 (ENSMUSG00000018379) #30 Dynll2 (ENSMUSG00000020483) #31 Or4d1 (ENSMUSG00000060787) Or4d2 (ENSMUSG00000093920) Or4d2b (ENSMUSG00000093839) Epx (ENSMUSG00000052234) Mks1 (ENSMUSG00000034121) Lpo (ENSMUSG00000009356) Mpo (ENSMUSG00000009350) Ryukyu mouse MODERN SPECIES 2 Tom1l1 (MGP_CAROLIEiJ_G0016965) #9 Cox11 (MGP_CAROLIEiJ_G0016964) Stxbp4 (MGP_CAROLIEiJ_G0016963) #10 Hlf (MGP_CAROLIEiJ_G0016962) #11 Mmd (MGP_CAROLIEiJ_G0016961) #12 Tmem100 (MGP_CAROLIEiJ_G0016960) #13 Pctp (MGP_CAROLIEiJ_G0016959) #14 MGP_CAROLIEiJ_G0016958 #15 MGP_CAROLIEiJ_G0016957 #16 Nog (MGP_CAROLIEiJ_G0016956) #17 Gm525 (MGP_CAROLIEiJ_G0016955) #18 Dgke (MGP_CAROLIEiJ_G0016954) #19 Trim25 (MGP_CAROLIEiJ_G0016953) #20 Coil (MGP_CAROLIEiJ_G0016952) #21 MGP_CAROLIEiJ_G0016951 Scpep1 (MGP_CAROLIEiJ_G0016950) #22 Akap1 (MGP_CAROLIEiJ_G0016949) #23 Msi2 (MGP_CAROLIEiJ_G0016948) #24 Ccdc182 (MGP_CAROLIEiJ_G0016947) #26 Mrps23 (MGP_CAROLIEiJ_G0016946) #27 MGP_CAROLIEiJ_G0016945 #28 Vezf1 (MGP_CAROLIEiJ_G0016944) #29 Srsf1 (MGP_CAROLIEiJ_G0016943) #30 Dynll2 (MGP_CAROLIEiJ_G0016942) #31 MGP_CAROLIEiJ_G0016941 Epx (MGP_CAROLIEiJ_G0016940) Mks1 (MGP_CAROLIEiJ_G0016939) MGP_CAROLIEiJ_G0016938 Mpo (MGP_CAROLIEiJ_G0016937) Tspoap1 (MGP_CAROLIEiJ_G0016936) Supt4a (MGP_CAROLIEiJ_G0016935) Shrew mouse MODERN SPECIES 5 Tom1l1 (MGP_PahariEiJ_G0018096) #9 Cox11 (MGP_PahariEiJ_G0018095) Stxbp4 (MGP_PahariEiJ_G0018094) #10 Hlf (MGP_PahariEiJ_G0018093) #11 Mmd (MGP_PahariEiJ_G0018092) #12 Tmem100 (MGP_PahariEiJ_G0018091) #13 Pctp (MGP_PahariEiJ_G0018090) #14 MGP_PahariEiJ_G0018089 #15 MGP_PahariEiJ_G0018088 #16 Nog (MGP_PahariEiJ_G0018087) #17 Gm525 (MGP_PahariEiJ_G0018086) #18 Dgke (MGP_PahariEiJ_G0018085) #19 Trim25 (MGP_PahariEiJ_G0018084) #20 MGP_PahariEiJ_G0018083 #21 MGP_PahariEiJ_G0018082 MGP_PahariEiJ_G0018081 #22 Akap1 (MGP_PahariEiJ_G0018080) #23 Msi2 (MGP_PahariEiJ_G0018079) #24 Ccdc182 (MGP_PahariEiJ_G0018078) #26 Mrps23 (MGP_PahariEiJ_G0018077) #27 Cuedc1 (MGP_PahariEiJ_G0018076) #28 Vezf1 (MGP_PahariEiJ_G0018075) #29 Srsf1 (MGP_PahariEiJ_G0018074) #30 Dynll2 (MGP_PahariEiJ_G0018073) #31 Or4d1 (MGP_PahariEiJ_G0018072) MGP_PahariEiJ_G0018071 MGP_PahariEiJ_G0018070 Epx (MGP_PahariEiJ_G0018069) Mks1 (MGP_PahariEiJ_G0018068) Lpo (MGP_PahariEiJ_G0018067) Mpo (MGP_PahariEiJ_G0018066) Rat MODERN SPECIES 1 Hlf (ENSRNOG00000067479) #11 Mmd (ENSRNOG00000002436) #12 Smim36 (ENSRNOG00000069860) Tmem100 (ENSRNOG00000002434) #13 Pctp (ENSRNOG00000002425) #14 Ankfn1 (ENSRNOG00000064511) #15 Nog (ENSRNOG00000023683) #17 C10h17orf67 (ENSRNOG00000064206) #18 Dgke (ENSRNOG00000002338) #19 Trim25 (ENSRNOG00000002341) #20 Coil (ENSRNOG00000000244) #21 RGD1562272 (ENSRNOG00000027511) AC119015.2 (ENSRNOG00000029479) Elob-ps4 (ENSRNOG00000067144) AC119015.3 (ENSRNOG00000034060) Scpep1 (ENSRNOG00000002358) #22 Akap1 (ENSRNOG00000002373) #23 Msi2 (ENSRNOG00000025338) #24 Ccdc182 (ENSRNOG00000068230) #26 Mrps23 (ENSRNOG00000010363) #27 Cuedc1 (ENSRNOG00000010257) #28 Vezf1 (ENSRNOG00000009819) #29 Srsf1 (ENSRNOG00000050323) #30 Dynll2 (ENSRNOG00000008921) Olr1523 (ENSRNOG00000066422) Or4d2b (ENSRNOG00000030521) Or4d2b (ENSRNOG00000067043) Epx (ENSRNOG00000008707) Mks1 (ENSRNOG00000008635) Lpo (ENSRNOG00000008422) Mpo (ENSRNOG00000008310) Lesser Egyptian jerboa MODERN SPECIES 180 Tom1l1 (ENSJJAG00000016468) #9 ENSJJAG00000015825 Stxbp4 (ENSJJAG00000015241) #10 Hlf (ENSJJAG00000014709) #11 ENSJJAG00000013972 #12 Tmem100 (ENSJJAG00000013082) #13 Pctp (ENSJJAG00000000610) #14 Ankfn1 (ENSJJAG00000000109) #15 ENSJJAG00000023126 ENSJJAG00000023053 #16 Nog (ENSJJAG00000013985) #17 Gm525 (ENSJJAG00000022695) #18 Dgke (ENSJJAG00000022410) #19 Trim25 (ENSJJAG00000021683) #20 Coil (ENSJJAG00000021225) #21 Scpep1 (ENSJJAG00000020526) #22 Akap1 (ENSJJAG00000010284) #23 ENSJJAG00000009789 ENSJJAG00000009467 #24 ENSJJAG00000006292 #24 Ccdc182 (ENSJJAG00000013314) #26 Mrps23 (ENSJJAG00000002424) #27 Cuedc1 (ENSJJAG00000000173) #28 Vezf1 (ENSJJAG00000000454) #29 Srsf1 (ENSJJAG00000000102) #30 Dynll2 (ENSJJAG00000023720) #31 Epx (ENSJJAG00000023171) Mks1 (ENSJJAG00000022635) Lpo (ENSJJAG00000021413) Mpo (ENSJJAG00000020363) Tspoap1 (ENSJJAG00000014589) Rodentia_A ANCESTRAL SPECIES 3 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT01090000261778 ENSGT00910000148790 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Sciuridae ANCESTRAL SPECIES 4 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT01090000261778 ENSGT00910000148790 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Marmotini ANCESTRAL SPECIES 8 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Marmotini_b ANCESTRAL SPECIES 5 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Squirrel MODERN SPECIES 90 CA10 (ENSSTOG00000016378) #7 KIF2B (ENSSTOG00000011516) ENSSTOG00000012160 #9 STXBP4 (ENSSTOG00000012175) #10 HLF (ENSSTOG00000029018) #11 MMD (ENSSTOG00000016227) #12 SMIM36 (ENSSTOG00000032016) TMEM100 (ENSSTOG00000012336) #13 PCTP (ENSSTOG00000008053) #14 ANKFN1 (ENSSTOG00000010280) #15 ENSSTOG00000019503 #16 NOG (ENSSTOG00000024922) #17 C17orf67 (ENSSTOG00000025271) #18 TRIM25 (ENSSTOG00000009323) #20 COIL (ENSSTOG00000012512) #21 SCPEP1 (ENSSTOG00000009343) #22 AKAP1 (ENSSTOG00000022206) #23 MSI2 (ENSSTOG00000007884) #24 CCDC182 (ENSSTOG00000020529) #26 MRPS23 (ENSSTOG00000006711) #27 CUEDC1 (ENSSTOG00000002920) #28 VEZF1 (ENSSTOG00000000239) #29 SRSF1 (ENSSTOG00000000243) #30 DYNLL2 (ENSSTOG00000024818) #31 OR4D2 (ENSSTOG00000024883) EPX (ENSSTOG00000009987) MKS1 (ENSSTOG00000009991) LPO (ENSSTOG00000009999) MPO (ENSSTOG00000010013) TSPOAP1 (ENSSTOG00000023162) SUPT4H1 (ENSSTOG00000032338) Arctic ground squirrel MODERN SPECIES 358 TRIM25 (ENSUPAG00010015054) #20 COIL (ENSUPAG00010015007) #21 SCPEP1 (ENSUPAG00010014431) #22 AKAP1 (ENSUPAG00010014398) #23 MSI2 (ENSUPAG00010014279) #24 CCDC182 (ENSUPAG00010014275) #26 MRPS23 (ENSUPAG00010014267) #27 CUEDC1 (ENSUPAG00010014241) #28 VEZF1 (ENSUPAG00010014233) #29 SRSF1 (ENSUPAG00010014203) #30 DYNLL2 (ENSUPAG00010014199) #31 OR4D1 (ENSUPAG00010014195) OR4D2 (ENSUPAG00010014191) EPX (ENSUPAG00010014171) MKS1 (ENSUPAG00010014159) LPO (ENSUPAG00010014144) MPO (ENSUPAG00010014120) TSPOAP1 (ENSUPAG00010014026) Alpin marmot MODERN SPECIES 42 STXBP4 (ENSMMMG00000020922) #10 HLF (ENSMMMG00000020915) #11 ENSMMMG00000020913 ENSMMMG00000020910 MMD (ENSMMMG00000020888) #12 SMIM36 (ENSMMMG00000020885) TMEM100 (ENSMMMG00000020880) #13 PCTP (ENSMMMG00000020875) #14 ANKFN1 (ENSMMMG00000020855) #15 ENSMMMG00000020845 #16 NOG (ENSMMMG00000020841) #17 C17orf67 (ENSMMMG00000020832) #18 DGKE (ENSMMMG00000020817) #19 TRIM25 (ENSMMMG00000020801) #20 COIL (ENSMMMG00000020795) #21 SCPEP1 (ENSMMMG00000020785) #22 ENSMMMG00000020780 ENSMMMG00000020772 #23 ENSMMMG00000020763 #23 MSI2 (ENSMMMG00000020747) #24 CCDC182 (ENSMMMG00000020744) #26 MRPS23 (ENSMMMG00000020740) #27 CUEDC1 (ENSMMMG00000020733) #28 VEZF1 (ENSMMMG00000020729) #29 SRSF1 (ENSMMMG00000020693) #30 DYNLL2 (ENSMMMG00000020685) #31 OR4D1 (ENSMMMG00000020679) EPX (ENSMMMG00000020642) MKS1 (ENSMMMG00000020621) LPO (ENSMMMG00000020607) MPO (ENSMMMG00000020576) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 12 TOM1L1 (ENSSVLG00005008148) #9 COX11 (ENSSVLG00005008220) STXBP4 (ENSSVLG00005008281) #10 HLF (ENSSVLG00005008325) #11 ENSSVLG00005008375 MMD (ENSSVLG00005008382) #12 SMIM36 (ENSSVLG00005008407) TMEM100 (ENSSVLG00005008462) #13 PCTP (ENSSVLG00005008497) #14 ANKFN1 (ENSSVLG00005008633) #15 NOG (ENSSVLG00005008960) #17 C17orf67 (ENSSVLG00005008977) #18 DGKE (ENSSVLG00005009005) #19 TRIM25 (ENSSVLG00005009042) #20 ENSSVLG00005009077 #21 ENSSVLG00005009156 #22 ENSSVLG00005009268 #22 AKAP1 (ENSSVLG00005009345) #23 MSI2 (ENSSVLG00005009431) #24 CCDC182 (ENSSVLG00005009670) #26 MRPS23 (ENSSVLG00005009697) #27 CUEDC1 (ENSSVLG00005009757) #28 VEZF1 (ENSSVLG00005009804) #29 SRSF1 (ENSSVLG00005009909) #30 DYNLL2 (ENSSVLG00005009962) #31 ENSSVLG00005009988 OR4D1 (ENSSVLG00005010018) OR4D2 (ENSSVLG00005010031) EPX (ENSSVLG00005010064) MKS1 (ENSSVLG00005010163) LPO (ENSSVLG00005010342) Eurasian red squirrel MODERN SPECIES 12 COX11 (ENSSVLG00005008220) STXBP4 (ENSSVLG00005008281) #10 HLF (ENSSVLG00005008325) #11 ENSSVLG00005008375 MMD (ENSSVLG00005008382) #12 SMIM36 (ENSSVLG00005008407) TMEM100 (ENSSVLG00005008462) #13 PCTP (ENSSVLG00005008497) #14 ANKFN1 (ENSSVLG00005008633) #15 NOG (ENSSVLG00005008960) #17 C17orf67 (ENSSVLG00005008977) #18 DGKE (ENSSVLG00005009005) #19 TRIM25 (ENSSVLG00005009042) #20 ENSSVLG00005009077 #21 ENSSVLG00005009156 #22 ENSSVLG00005009268 #22 AKAP1 (ENSSVLG00005009345) #23 MSI2 (ENSSVLG00005009431) #24 CCDC182 (ENSSVLG00005009670) #26 MRPS23 (ENSSVLG00005009697) #27 CUEDC1 (ENSSVLG00005009757) #28 VEZF1 (ENSSVLG00005009804) #29 SRSF1 (ENSSVLG00005009909) #30 DYNLL2 (ENSSVLG00005009962) #31 ENSSVLG00005009988 OR4D1 (ENSSVLG00005010018) OR4D2 (ENSSVLG00005010031) EPX (ENSSVLG00005010064) MKS1 (ENSSVLG00005010163) LPO (ENSSVLG00005010342) MPO (ENSSVLG00005010554) Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00940000163071 #16 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g ENSGT00390000018559 Long-tailed chinchilla MODERN SPECIES 158 TOM1L1 (ENSCLAG00000012206) #9 COX11 (ENSCLAG00000013909) STXBP4 (ENSCLAG00000011711) #10 HLF (ENSCLAG00000013244) #11 MMD (ENSCLAG00000016458) #12 SMIM36 (ENSCLAG00000018044) TMEM100 (ENSCLAG00000014942) #13 PCTP (ENSCLAG00000012326) #14 ANKFN1 (ENSCLAG00000015690) #15 ENSCLAG00000013710 #16 NOG (ENSCLAG00000017798) #17 C17orf67 (ENSCLAG00000015852) #18 DGKE (ENSCLAG00000012917) #19 TRIM25 (ENSCLAG00000017035) #20 ENSCLAG00000014496 #21 SCPEP1 (ENSCLAG00000015159) #22 AKAP1 (ENSCLAG00000015261) #23 MSI2 (ENSCLAG00000014325) #24 MRPS23 (ENSCLAG00000013109) #27 CUEDC1 (ENSCLAG00000012560) #28 VEZF1 (ENSCLAG00000011306) #29 SRSF1 (ENSCLAG00000014707) #30 DYNLL2 (ENSCLAG00000014096) #31 ENSCLAG00000017831 ENSCLAG00000015179 OR4D2 (ENSCLAG00000017866) EPX (ENSCLAG00000015927) MKS1 (ENSCLAG00000016366) LPO (ENSCLAG00000012167) MPO (ENSCLAG00000015465) TSPOAP1 (ENSCLAG00000013352) Degu MODERN SPECIES 263 ENSODEG00000011833 STXBP4 (ENSODEG00000011379) #10 HLF (ENSODEG00000011608) #11 MMD (ENSODEG00000013055) #12 TMEM100 (ENSODEG00000019916) #13 PCTP (ENSODEG00000014619) #14 ANKFN1 (ENSODEG00000012115) #15 ENSODEG00000012707 #16 NOG (ENSODEG00000020232) #17 C17orf67 (ENSODEG00000013079) #18 DGKE (ENSODEG00000012600) #19 TRIM25 (ENSODEG00000011829) #20 ENSODEG00000012139 COIL (ENSODEG00000012389) #21 SCPEP1 (ENSODEG00000010769) #22 ENSODEG00000011240 #23 TMEM238 (ENSODEG00000011450) MSI2 (ENSODEG00000011974) #24 ENSODEG00000011449 MRPS23 (ENSODEG00000011027) #27 CUEDC1 (ENSODEG00000011861) #28 VEZF1 (ENSODEG00000011127) #29 SRSF1 (ENSODEG00000011481) #30 DYNLL2 (ENSODEG00000013208) #31 ENSODEG00000019998 OR4D1 (ENSODEG00000019941) OR4D2 (ENSODEG00000019834) ENSODEG00000020120 EPX (ENSODEG00000011351) MKS1 (ENSODEG00000012294) Guinea pig MODERN SPECIES 53 TOM1L1 (ENSCPOG00000023145) #9 COX11 (ENSCPOG00000008482) STXBP4 (ENSCPOG00000011602) #10 HLF (ENSCPOG00000032087) #11 MMD (ENSCPOG00000039747) #12 SMIM36 (ENSCPOG00000032031) TMEM100 (ENSCPOG00000040096) #13 PCTP (ENSCPOG00000013507) #14 ANKFN1 (ENSCPOG00000004925) #15 NOG (ENSCPOG00000004932) #17 C17orf67 (ENSCPOG00000022723) #18 DGKE (ENSCPOG00000011459) #19 ENSCPOG00000009078 TRIM25 (ENSCPOG00000013452) #20 COIL (ENSCPOG00000001284) #21 SCPEP1 (ENSCPOG00000002870) #22 AKAP1 (ENSCPOG00000013327) #23 MSI2 (ENSCPOG00000034042) #24 CCDC182 (ENSCPOG00000008757) #26 MRPS23 (ENSCPOG00000008761) #27 CUEDC1 (ENSCPOG00000022982) #28 VEZF1 (ENSCPOG00000002637) #29 SRSF1 (ENSCPOG00000032681) #30 DYNLL2 (ENSCPOG00000039544) #31 OR4D1 (ENSCPOG00000030997) ENSCPOG00000033512 ENSCPOG00000031204 EPX (ENSCPOG00000000506) MKS1 (ENSCPOG00000000507) LPO (ENSCPOG00000023620) MPO (ENSCPOG00000027142) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 12 ENSHGLG00000039115 HLF (ENSHGLG00000031895) #11 MMD (ENSHGLG00000011695) #12 SMIM36 (ENSHGLG00000047421) TMEM100 (ENSHGLG00000049459) #13 PCTP (ENSHGLG00000013528) #14 ENSHGLG00000001904 ANKFN1 (ENSHGLG00000016659) #15 NOG (ENSHGLG00000048920) #17 C17orf67 (ENSHGLG00000050116) #18 DGKE (ENSHGLG00000014836) #19 ENSHGLG00000033692 ENSHGLG00000036551 TRIM25 (ENSHGLG00000011477) #20 ENSHGLG00000012113 #21 ENSHGLG00000012440 #22 AKAP1 (ENSHGLG00000014384) #23 MSI2 (ENSHGLG00000012444) #24 CCDC182 (ENSHGLG00000037062) #26 ENSHGLG00000041008 MRPS23 (ENSHGLG00000012208) #27 ENSHGLG00000044611 #28 ENSHGLG00000042495 ENSHGLG00000039867 ENSHGLG00000042780 ENSHGLG00000003819 TMEM11 (ENSHGLG00000005715) NATD1 (ENSHGLG00000007125) MAP2K3 (ENSHGLG00000040410) ENSHGLG00000033829 ENSHGLG00000003535 Naked mole-rat female MODERN SPECIES 2 ENSHGLG00000009415 ENSHGLG00000041019 ZAR1L (ENSHGLG00000006253) BRCA2 (ENSHGLG00000008590) N4BP2L1 (ENSHGLG00000006971) ENSHGLG00000039341 ENSHGLG00000018160 PDS5B (ENSHGLG00000006670) ENSHGLG00000006974 KL (ENSHGLG00000005334) ENSHGLG00000018786 ENSHGLG00000032772 ENSHGLG00000021355 ENSHGLG00000019417 ENSHGLG00000021428 ENSHGLG00000013996 #22 ENSHGLG00000004608 MAB21L1 (ENSHGLG00000035394) ENSHGLG00000003756 ENSHGLG00000037090 ENSHGLG00000003703 ENSHGLG00000010793 CCDC169 (ENSHGLG00000032864) SPG20 (ENSHGLG00000003791) CCNA1 (ENSHGLG00000002880) SERTM1 (ENSHGLG00000047070) RFXAP (ENSHGLG00000004899) ENSHGLG00000050490 ALG5 (ENSHGLG00000003783) EXOSC8 (ENSHGLG00000002963) SUPT20H (ENSHGLG00000013900) Lagomorpha ANCESTRAL SPECIES ENSGT00940000163180 ENSGT00940000160240 #9 ENSGT00390000007512 ENSGT00390000002226 #10 ENSGT00940000156555 #11 ENSGT00940000157428 #12 ENSGT00980000198588 ENSGT00940000154322.A #13 ENSGT00940000156843 #14 ENSGT00940000159856 #15 ENSGT00390000006009.a.a.a #17 ENSGT00390000006555 #18 ENSGT00940000158604 #19 ENSGT00940000160741 #20 ENSGT00390000004832 #21 ENSGT00940000156193 #22 ENSGT00390000001360 #23 ENSGT00940000155420.b #24 ENSGT00390000014787 #26 ENSGT00390000009030 #27 ENSGT00390000006762 #28 ENSGT00940000155932 #29 ENSGT00940000155585 #30 ENSGT00390000000378.d.a #31 ENSGT00940000154503.b ENSGT00940000154503.a ENSGT00940000156009.A ENSGT00510000047471 ENSGT00940000160488 ENSGT00940000161343 ENSGT00950000183203.d.g Rabbit MODERN SPECIES 10 ENSOCUG00000008462 #9 COX11 (ENSOCUG00000008473) STXBP4 (ENSOCUG00000008478) #10 HLF (ENSOCUG00000010547) #11 MMD (ENSOCUG00000010549) #12 SMIM36 (ENSOCUG00000032098) TMEM100 (ENSOCUG00000026610) #13 PCTP (ENSOCUG00000008956) #14 ENSOCUG00000030404 ANKFN1 (ENSOCUG00000001342) #15 NOG (ENSOCUG00000010678) #17 C17orf67 (ENSOCUG00000026474) #18 DGKE (ENSOCUG00000012800) #19 ENSOCUG00000011338 #20 COIL (ENSOCUG00000011345) #21 SCPEP1 (ENSOCUG00000011355) #22 AKAP1 (ENSOCUG00000017563) #23 MSI2 (ENSOCUG00000010440) #24 CCDC182 (ENSOCUG00000003346) #26 MRPS23 (ENSOCUG00000003350) #27 CUEDC1 (ENSOCUG00000003354) #28 VEZF1 (ENSOCUG00000017673) #29 ENSOCUG00000017678 #30 DYNLL2 (ENSOCUG00000016563) #31 OR4D1 (ENSOCUG00000011022) OR4D2 (ENSOCUG00000010006) EPX (ENSOCUG00000010009) MKS1 (ENSOCUG00000010018) LPO (ENSOCUG00000009698) MPO (ENSOCUG00000006526) TSPOAP1 (ENSOCUG00000009705) Pika MODERN SPECIES 4712 ENSOPRG00000018736 #18 ENSOPRG00000016449 #20 ENSOPRG00000016463 #21 SCPEP1 (ENSOPRG00000016473) #22 ENSOPRG00000016488 #23