Euteleostomi	ANCESTRAL SPECIES	62	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000165711	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000176900	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000158236	ENSGT00390000013215	ENSGT00940000161511
Sarcopterygii	ANCESTRAL SPECIES	99	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000165711	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000176900	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000158236
Tetrapoda	ANCESTRAL SPECIES	95	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000158236
Amniota	ANCESTRAL SPECIES	1	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000163429.D
Mammalia	ANCESTRAL SPECIES	2	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000154428.a
Theria	ANCESTRAL SPECIES	4	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Glires	ANCESTRAL SPECIES	5	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Marmotini	ANCESTRAL SPECIES	11	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Alpin marmot	MODERN SPECIES	2	ENSMMMG00000002506 #7	ENSMMMG00000002510 #8	PPIL4 (ENSMMMG00000002523) #9	GINM1 (ENSMMMG00000002548) #10	KATNA1 (ENSMMMG00000002573) #11	ENSMMMG00000002742 #12	LATS1 (ENSMMMG00000002763) #13	ENSMMMG00000002801 #14	NUP43 (ENSMMMG00000002812) #15	PCMT1 (ENSMMMG00000002841) #16	ENSMMMG00000002884 #17	ENSMMMG00000002939 #18	ENSMMMG00000002962 #19	IYD (ENSMMMG00000002984) #20	PLEKHG1 (ENSMMMG00000003011) #21	MTHFD1L (ENSMMMG00000003062) #22	AKAP12 (ENSMMMG00000003251) #23	ZBTB2 (ENSMMMG00000003286) #24	RMND1 (ENSMMMG00000003297) #25	ARMT1 (ENSMMMG00000003333) #26	CCDC170 (ENSMMMG00000003378) #27	ESR1 (ENSMMMG00000003430) #28	ENSMMMG00000003497 #29	ENSMMMG00000003544 #30	ENSMMMG00000003589 #31	ENSMMMG00000003653 #32	MYCT1 (ENSMMMG00000003699) #33	VIP (ENSMMMG00000003724) #34	FBXO5 (ENSMMMG00000003740) #35	MTRF1L (ENSMMMG00000003749) #36	RGS17 (ENSMMMG00000003762) #37
Marmotini_b	ANCESTRAL SPECIES	56	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157838.c.c #12	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Arctic ground squirrel	MODERN SPECIES	219													ENSUPAG00010013564	IYD (ENSUPAG00010013543) #20	PLEKHG1 (ENSUPAG00010013492) #21	MTHFD1L (ENSUPAG00010013390) #22	AKAP12 (ENSUPAG00010013348) #23	ZBTB2 (ENSUPAG00010013345) #24	RMND1 (ENSUPAG00010013328) #25	ARMT1 (ENSUPAG00010013297) #26	CCDC170 (ENSUPAG00010013267) #27	ESR1 (ENSUPAG00010013233) #28	SYNE1 (ENSUPAG00010012988) #32	MYCT1 (ENSUPAG00010012980) #33	VIP (ENSUPAG00010012967) #34	FBXO5 (ENSUPAG00010012958) #35	MTRF1L (ENSUPAG00010012945) #36	RGS17 (ENSUPAG00010012932) #37
Squirrel	MODERN SPECIES	89	TAB2 (ENSSTOG00000020798)	ZC3H12D (ENSSTOG00000013975) #7	PPIL4 (ENSSTOG00000013980) #9	GINM1 (ENSSTOG00000013991) #10	KATNA1 (ENSSTOG00000013998) #11	ENSSTOG00000023820 #12	LATS1 (ENSSTOG00000013443) #13	NUP43 (ENSSTOG00000013449) #15	PCMT1 (ENSSTOG00000024407) #16	LRP11 (ENSSTOG00000000512)	ENSSTOG00000001385 #18	ENSSTOG00000029925	PPP1R14C (ENSSTOG00000002019)	IYD (ENSSTOG00000002022) #20	PLEKHG1 (ENSSTOG00000010912) #21	MTHFD1L (ENSSTOG00000010921) #22	AKAP12 (ENSSTOG00000029201) #23	ZBTB2 (ENSSTOG00000021611) #24	RMND1 (ENSSTOG00000013141) #25	ARMT1 (ENSSTOG00000013153) #26	CCDC170 (ENSSTOG00000013161) #27	ESR1 (ENSSTOG00000006748) #28	ENSSTOG00000030302 #32	ENSSTOG00000006796 #31	ENSSTOG00000034176 #32	MYCT1 (ENSSTOG00000010644) #33	VIP (ENSSTOG00000007656) #34	FBXO5 (ENSSTOG00000029069) #35	MTRF1L (ENSSTOG00000009980) #36	RGS17 (ENSSTOG00000009988) #37	OPRM1 (ENSSTOG00000000418)
Eurasian red squirrel	MODERN SPECIES	16	PPIL4 (ENSSVLG00005013984) #9	ENSSVLG00005013892 #10	KATNA1 (ENSSVLG00005013780) #11	LATS1 (ENSSVLG00005013545) #13	NUP43 (ENSSVLG00005013493) #15	PCMT1 (ENSSVLG00005013272) #16	ENSSVLG00005013084	LRP11 (ENSSVLG00005012935)	ENSSVLG00005012789 #19	ENSSVLG00005012647 #18	ENSSVLG00005012613	ENSSVLG00005012559 #18	PPP1R14C (ENSSVLG00005012500)	IYD (ENSSVLG00005012284) #20	PLEKHG1 (ENSSVLG00005012201) #21	MTHFD1L (ENSSVLG00005012073) #22	AKAP12 (ENSSVLG00005012004) #23	ZBTB2 (ENSSVLG00005011964) #24	RMND1 (ENSSVLG00005011890) #25	ARMT1 (ENSSVLG00005011814) #26	CCDC170 (ENSSVLG00005011680) #27	ESR1 (ENSSVLG00005011518) #28	ENSSVLG00005011101 #32	ENSSVLG00005010970 #32	ENSSVLG00005010938 #31	ENSSVLG00005021418 #32	MYCT1 (ENSSVLG00005021349) #33	VIP (ENSSVLG00005021260) #34	ENSSVLG00005021174	FBXO5 (ENSSVLG00005021108) #35	ENSSVLG00005020917 #36
Hystricomorpha	ANCESTRAL SPECIES	53	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473.b	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.dc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00440000039314.a.e.a.b	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Hystricomorpha_a	ANCESTRAL SPECIES	30	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473.b	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.dc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00440000039314.a.e.a.b	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Hystricomorpha_b	ANCESTRAL SPECIES	29	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473.b	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.dc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00440000039314.a.e.a.b	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Long-tailed chinchilla	MODERN SPECIES	146	STXBP5 (ENSCLAG00000004159)	SASH1 (ENSCLAG00000003367)	UST (ENSCLAG00000003051)	TAB2 (ENSCLAG00000002977)	ZC3H12D (ENSCLAG00000002831) #7	PPIL4 (ENSCLAG00000003991) #9	GINM1 (ENSCLAG00000003584) #10	KATNA1 (ENSCLAG00000003505) #11	LATS1 (ENSCLAG00000003449) #13	NUP43 (ENSCLAG00000003394) #15	PCMT1 (ENSCLAG00000003224) #16	ENSCLAG00000003173	ENSCLAG00000002777	IYD (ENSCLAG00000002712) #20	PLEKHG1 (ENSCLAG00000004103) #21	MTHFD1L (ENSCLAG00000003603) #22	AKAP12 (ENSCLAG00000003496) #23	ZBTB2 (ENSCLAG00000003435) #24	ENSCLAG00000003248	ARMT1 (ENSCLAG00000003161) #26	CCDC170 (ENSCLAG00000003105) #27	ESR1 (ENSCLAG00000003026) #28	ENSCLAG00000002772 #32	ENSCLAG00000002568 #31	ENSCLAG00000002479 #32	MYCT1 (ENSCLAG00000004202) #33	VIP (ENSCLAG00000004151) #34	ENSCLAG00000004035	FBXO5 (ENSCLAG00000003927) #35	ENSCLAG00000003820	MTRF1L (ENSCLAG00000003779) #36
Degu	MODERN SPECIES	287												PPP1R14C (ENSODEG00000001211)	IYD (ENSODEG00000001311) #20	ENSODEG00000018708	PLEKHG1 (ENSODEG00000001446) #21	MTHFD1L (ENSODEG00000001602) #22	ENSODEG00000018687	ZBTB2 (ENSODEG00000001142) #24	RMND1 (ENSODEG00000001174) #25	ENSODEG00000001262 #26	ENSODEG00000001273 #26	ENSODEG00000001305	CCDC170 (ENSODEG00000000921) #27	ENSODEG00000000997	ESR1 (ENSODEG00000001036) #28	SYNE1 (ENSODEG00000001363) #32	MYCT1 (ENSODEG00000001986) #33	VIP (ENSODEG00000002006) #34
Guinea pig	MODERN SPECIES	41	ARG1 (ENSCPOG00000023666)	AKAP7 (ENSCPOG00000035986)	EPB41L2 (ENSCPOG00000012165)	ENSCPOG00000037530	ENSCPOG00000006291	L3MBTL3 (ENSCPOG00000006280)	ARHGAP18 (ENSCPOG00000003798)	LAMA2 (ENSCPOG00000014253)	PTPRK (ENSCPOG00000011053)	THEMIS (ENSCPOG00000008519)	C6orf58 (ENSCPOG00000012978)	ENSCPOG00000035238	KIAA0408 (ENSCPOG00000020737)	ENSCPOG00000035414	PLEKHG1 (ENSCPOG00000010045) #21	MTHFD1L (ENSCPOG00000010056) #22	AKAP12 (ENSCPOG00000005547) #23	ZBTB2 (ENSCPOG00000034799) #24	ENSCPOG00000005849	ARMT1 (ENSCPOG00000040489) #26	CCDC170 (ENSCPOG00000008222) #27	ESR1 (ENSCPOG00000008317) #28	ENSCPOG00000039266 #32	ENSCPOG00000008325 #31	ENSCPOG00000032322 #32	MYCT1 (ENSCPOG00000036928) #33	VIP (ENSCPOG00000002991) #34	FBXO5 (ENSCPOG00000007680) #35	RGS17 (ENSCPOG00000003312) #37	OPRM1 (ENSCPOG00000008135)	IPCEF1 (ENSCPOG00000003418)
Naked mole-rat female	MODERN SPECIES		PPIL4 (ENSHGLG00000007609) #9	GINM1 (ENSHGLG00000006870) #10	KATNA1 (ENSHGLG00000003287) #11	LATS1 (ENSHGLG00000010491) #13	NUP43 (ENSHGLG00000007986) #15	PCMT1 (ENSHGLG00000033749) #16	ENSHGLG00000006945	ENSHGLG00000035878	ENSHGLG00000039077	ENSHGLG00000012691	ENSHGLG00000012404	ENSHGLG00000036728	ENSHGLG00000012265 #20	ENSHGLG00000046296 #21	ENSHGLG00000003082	MTHFD1L (ENSHGLG00000010567) #22	AKAP12 (ENSHGLG00000008686) #23	ZBTB2 (ENSHGLG00000041496) #24	RMND1 (ENSHGLG00000006256) #25	ARMT1 (ENSHGLG00000046933) #26	CCDC170 (ENSHGLG00000002356) #27	ENSHGLG00000046338	ENSHGLG00000016358	ESR1 (ENSHGLG00000001873) #28	ENSHGLG00000005683 #32	ENSHGLG00000041227	ENSHGLG00000047622 #32	ENSHGLG00000004180 #32	MYCT1 (ENSHGLG00000003966) #33	VIP (ENSHGLG00000003764) #34	ENSHGLG00000003666
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Muroidea	ANCESTRAL SPECIES	22	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00900000143212	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00900000143212	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Northern American deer mouse	MODERN SPECIES	7	Katna1 (ENSPEMG00000020852) #11	Lats1 (ENSPEMG00000021147) #13	Nup43 (ENSPEMG00000022692) #15	Pcmt1 (ENSPEMG00000027593) #16	Lrp11 (ENSPEMG00000000669)	ENSPEMG00000026371 #18	ENSPEMG00000026324	ENSPEMG00000027039 #19	ENSPEMG00000025014	ENSPEMG00000028469 #18	ENSPEMG00000029355 #19	ENSPEMG00000031117	Ppp1r14c (ENSPEMG00000026419)	Iyd (ENSPEMG00000009998) #20	Plekhg1 (ENSPEMG00000003381) #21	Mthfd1l (ENSPEMG00000012428) #22	ENSPEMG00000028722 #23	Zbtb2 (ENSPEMG00000028248) #24	Rmnd1 (ENSPEMG00000014544) #25	Armt1 (ENSPEMG00000027664) #26	Ccdc170 (ENSPEMG00000018858) #27	ENSPEMG00000028412	Esr1 (ENSPEMG00000012747) #28	ENSPEMG00000000704 #32	ENSPEMG00000029017 #32	ENSPEMG00000013933 #31	ENSPEMG00000007014 #32	Myct1 (ENSPEMG00000016041) #33	Vip (ENSPEMG00000007974) #34	ENSPEMG00000005147	Fbxo5 (ENSPEMG00000017534) #35
Prairie vole	MODERN SPECIES	358	Tspyl1 (ENSMOCG00000007884)	Dse (ENSMOCG00000021598)	Calhm6 (ENSMOCG00000017769)	Calhm5 (ENSMOCG00000011633)	Trappc3l (ENSMOCG00000011302)	Calhm4 (ENSMOCG00000004418)	ENSMOCG00000002869	ENSMOCG00000021945	Grik2 (ENSMOCG00000022205)	Ascc3 (ENSMOCG00000004549)	Sim1 (ENSMOCG00000017754)	ENSMOCG00000008070	Ppp1r14c (ENSMOCG00000002551)	Iyd (ENSMOCG00000012475) #20	Plekhg1 (ENSMOCG00000006027) #21	Mthfd1l (ENSMOCG00000011918) #22	ENSMOCG00000019373 #23	Zbtb2 (ENSMOCG00000018175) #24	Rmnd1 (ENSMOCG00000012373) #25	Armt1 (ENSMOCG00000008335) #26	Ccdc170 (ENSMOCG00000015340) #27	ENSMOCG00000008666	Esr1 (ENSMOCG00000004623) #28	Syne1 (ENSMOCG00000003007) #32	Myct1 (ENSMOCG00000003327) #33	Vip (ENSMOCG00000000402) #34	Fbxo5 (ENSMOCG00000016622) #35	Mtrf1l (ENSMOCG00000016147) #36	Rgs17 (ENSMOCG00000013891) #37	Oprm1 (ENSMOCG00000009671)	Ipcef1 (ENSMOCG00000015115)
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00900000143212	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00940000165162 #31	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001006451	Ust (ENSCGRG00001021198)	ENSCGRG00001021850	Tab2 (ENSCGRG00001022302)	Zc3h12d (ENSCGRG00001019159) #7	Ppil4 (ENSCGRG00001019623) #9	Ginm1 (ENSCGRG00001022724) #10	Katna1 (ENSCGRG00001023013) #11	Lats1 (ENSCGRG00001023972) #13	ENSCGRG00001019911 #15	Pcmt1 (ENSCGRG00001009158) #16	Lrp11 (ENSCGRG00001010309)	Ppp1r14c (ENSCGRG00001022707)	Iyd (ENSCGRG00001022969) #20	Plekhg1 (ENSCGRG00001023431) #21	Mthfd1l (ENSCGRG00001022372) #22	Akap12 (ENSCGRG00001022879) #23	Zbtb2 (ENSCGRG00001023273) #24	Rmnd1 (ENSCGRG00001018312) #25	Armt1 (ENSCGRG00001019042) #26	Ccdc170 (ENSCGRG00001019582) #27	Esr1 (ENSCGRG00001024268) #28	ENSCGRG00001024508 #32	ENSCGRG00001016292 #31	ENSCGRG00001017406 #32	Myct1 (ENSCGRG00001007389) #33	Vip (ENSCGRG00001023726) #34	Fbxo5 (ENSCGRG00001024225) #35	Mtrf1l (ENSCGRG00001024662) #36	Rgs17 (ENSCGRG00001008622) #37	ENSCGRG00001007014
Golden Hamster	MODERN SPECIES	621	ENSMAUG00000020795	ENSMAUG00000008799	Tab2 (ENSMAUG00000011287)	Zc3h12d (ENSMAUG00000015783) #7	Ppil4 (ENSMAUG00000015059) #9	Ginm1 (ENSMAUG00000008067) #10	ENSMAUG00000016471 #11	ENSMAUG00000012301 #11	Lats1 (ENSMAUG00000020092) #13	Nup43 (ENSMAUG00000018659) #15	Pcmt1 (ENSMAUG00000011320) #16	Lrp11 (ENSMAUG00000014809)	Ppp1r14c (ENSMAUG00000019718)	Iyd (ENSMAUG00000013810) #20	ENSMAUG00000011570 #21	Mthfd1l (ENSMAUG00000016191) #22	ENSMAUG00000020409 #23	Zbtb2 (ENSMAUG00000008627) #24	Rmnd1 (ENSMAUG00000011585) #25	Armt1 (ENSMAUG00000012945) #26	Ccdc170 (ENSMAUG00000008640) #27	Esr1 (ENSMAUG00000006785) #28	ENSMAUG00000014937 #32	ENSMAUG00000012320 #31	ENSMAUG00000019847 #32	Myct1 (ENSMAUG00000014906) #33	Vip (ENSMAUG00000014470) #34	Fbxo5 (ENSMAUG00000000824) #35	Mtrf1l (ENSMAUG00000017702) #36	ENSMAUG00000021559	Oprm1 (ENSMAUG00000016741)
Murinae	ANCESTRAL SPECIES	29													ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Mus	ANCESTRAL SPECIES	15													ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Mus_A	ANCESTRAL SPECIES	11													ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401.a #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Mus_B	ANCESTRAL SPECIES	10											ENSGT00940000169591.d	ENSGT01100000263517.b.d.m.a.a.a.a.c.x #19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401.a #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Mouse	MODERN SPECIES	1												H60c (ENSMUSG00000091618)	Ppp1r14c (ENSMUSG00000040653)	Iyd (ENSMUSG00000019762) #20	Plekhg1 (ENSMUSG00000040624) #21	Mthfd1l (ENSMUSG00000040675) #22	Akap12 (ENSMUSG00000038587) #23	Zbtb2 (ENSMUSG00000075327) #24	Rmnd1 (ENSMUSG00000019763) #25	Armt1 (ENSMUSG00000061759) #26	Ccdc170 (ENSMUSG00000019767) #27	Esr1 (ENSMUSG00000019768) #28	Syne1 (ENSMUSG00000096054) #32	Myct1 (ENSMUSG00000046916) #33	Vip (ENSMUSG00000019772) #34	Fbxo5 (ENSMUSG00000019773) #35	Mtrf1l (ENSMUSG00000019774) #36	Rgs17 (ENSMUSG00000019775) #37	Oprm1 (ENSMUSG00000000766)	Ipcef1 (ENSMUSG00000064065)	Cnksr3 (ENSMUSG00000015202)
Mus_C	ANCESTRAL SPECIES	7											ENSGT00940000169591.d	ENSGT01100000263517.b.d.m.a.a.a.a.c.x #19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401.a #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Steppe mouse	MODERN SPECIES	3173										ENSMSIG00000028950	ENSMSIG00000028953	H60c (ENSMSIG00000028958)	ENSMSIG00000028966	ENSMSIG00000028971 #20	Plekhg1 (ENSMSIG00000028989) #21	Mthfd1l (ENSMSIG00000029009) #22	ENSMSIG00000029049	Akap12 (ENSMSIG00000029068) #23	ENSMSIG00000029085	Zbtb2 (ENSMSIG00000029096) #24	Rmnd1 (ENSMSIG00000029100) #25	Armt1 (ENSMSIG00000029112) #26	Ccdc170 (ENSMSIG00000029125) #27	Esr1 (ENSMSIG00000029132) #28	Syne1 (ENSMSIG00000029148) #32	Myct1 (ENSMSIG00000029269) #33	Vip (ENSMSIG00000029272) #34
spretus	MODERN SPECIES	1									MGP_SPRETEiJ_G0015877	MGP_SPRETEiJ_G0015878	MGP_SPRETEiJ_G0015880 #19	MGP_SPRETEiJ_G0015881 #19	Ppp1r14c (MGP_SPRETEiJ_G0015882)	Iyd (MGP_SPRETEiJ_G0015883) #20	Plekhg1 (MGP_SPRETEiJ_G0015884) #21	Mthfd1l (MGP_SPRETEiJ_G0015885) #22	Akap12 (MGP_SPRETEiJ_G0015886) #23	Zbtb2 (MGP_SPRETEiJ_G0015887) #24	Rmnd1 (MGP_SPRETEiJ_G0015888) #25	Armt1 (MGP_SPRETEiJ_G0015889) #26	Ccdc170 (MGP_SPRETEiJ_G0015890) #27	Esr1 (MGP_SPRETEiJ_G0015891) #28	MGP_SPRETEiJ_G0015893	Myct1 (MGP_SPRETEiJ_G0015895) #33	Vip (MGP_SPRETEiJ_G0015896) #34	Fbxo5 (MGP_SPRETEiJ_G0015897) #35	Mtrf1l (MGP_SPRETEiJ_G0015898) #36	Rgs17 (MGP_SPRETEiJ_G0015899) #37	Oprm1 (MGP_SPRETEiJ_G0015900)	Ipcef1 (MGP_SPRETEiJ_G0015901)	Cnksr3 (MGP_SPRETEiJ_G0015902)
Ryukyu mouse	MODERN SPECIES	1													Ppp1r14c (MGP_CAROLIEiJ_G0015077)	Iyd (MGP_CAROLIEiJ_G0015078) #20	Plekhg1 (MGP_CAROLIEiJ_G0015079) #21	Mthfd1l (MGP_CAROLIEiJ_G0015080) #22	Akap12 (MGP_CAROLIEiJ_G0015081) #23	Zbtb2 (MGP_CAROLIEiJ_G0015082) #24	Rmnd1 (MGP_CAROLIEiJ_G0015083) #25	Armt1 (MGP_CAROLIEiJ_G0015084) #26	Ccdc170 (MGP_CAROLIEiJ_G0015085) #27	Esr1 (MGP_CAROLIEiJ_G0015086) #28	MGP_CAROLIEiJ_G0015087 #32	MGP_CAROLIEiJ_G0015088	Myct1 (MGP_CAROLIEiJ_G0015089) #33	Vip (MGP_CAROLIEiJ_G0015090) #34	Fbxo5 (MGP_CAROLIEiJ_G0015091) #35	Mtrf1l (MGP_CAROLIEiJ_G0015092) #36	Rgs17 (MGP_CAROLIEiJ_G0015093) #37	Oprm1 (MGP_CAROLIEiJ_G0015094)	Ipcef1 (MGP_CAROLIEiJ_G0015095)
Shrew mouse	MODERN SPECIES	13	Rsph1 (MGP_PahariEiJ_G0023684)	Slc37a1 (MGP_PahariEiJ_G0023685)	Pde9a (MGP_PahariEiJ_G0023686)	MGP_PahariEiJ_G0023687	Ndufv3 (MGP_PahariEiJ_G0023688)	Pknox1 (MGP_PahariEiJ_G0023689)	Cbs (MGP_PahariEiJ_G0023690)	U2af1 (MGP_PahariEiJ_G0023691)	Cryaa (MGP_PahariEiJ_G0023692)	Sik1 (MGP_PahariEiJ_G0023693)	MGP_PahariEiJ_G0023694	Rrp1b (MGP_PahariEiJ_G0023695)	Ppp1r14c (MGP_PahariEiJ_G0023696)	Iyd (MGP_PahariEiJ_G0023697) #20	Plekhg1 (MGP_PahariEiJ_G0023698) #21	Mthfd1l (MGP_PahariEiJ_G0023699) #22	Akap12 (MGP_PahariEiJ_G0023700) #23	Zbtb2 (MGP_PahariEiJ_G0023701) #24	MGP_PahariEiJ_G0023702	Armt1 (MGP_PahariEiJ_G0023703) #26	MGP_PahariEiJ_G0023704 #27	Esr1 (MGP_PahariEiJ_G0023705) #28	MGP_PahariEiJ_G0023706 #32	MGP_PahariEiJ_G0023707	Myct1 (MGP_PahariEiJ_G0023708) #33	Vip (MGP_PahariEiJ_G0023709) #34	Fbxo5 (MGP_PahariEiJ_G0023710) #35	Mtrf1l (MGP_PahariEiJ_G0023711) #36	Rgs17 (MGP_PahariEiJ_G0023712) #37	Oprm1 (MGP_PahariEiJ_G0023713)	Ipcef1 (MGP_PahariEiJ_G0023714)
Rat	MODERN SPECIES		Zfp273l-ps1 (ENSRNOG00000046353)	ENSRNOG00000068667	ENSRNOG00000066169	ENSRNOG00000067171	ENSRNOG00000070839	ENSRNOG00000068976	ENSRNOG00000063413	ENSRNOG00000067926	ENSRNOG00000069813	ENSRNOG00000067477	ENSRNOG00000070838	AABR07001348.1 (ENSRNOG00000023081) #19	Ppp1r14c (ENSRNOG00000016368)	Iyd (ENSRNOG00000016286) #20	Plekhg1 (ENSRNOG00000016011) #21	Mthfd1l (ENSRNOG00000019582) #22	Akap12 (ENSRNOG00000019549) #23	Zbtb2 (ENSRNOG00000019544) #24	Rmnd1 (ENSRNOG00000019501) #25	Armt1 (ENSRNOG00000019489) #26	Ccdc170 (ENSRNOG00000024280) #27	Esr1 (ENSRNOG00000019358) #28	Syne1 (ENSRNOG00000018960) #32	Myct1 (ENSRNOG00000018858) #33	Vip (ENSRNOG00000018808) #34	Fbxo5 (ENSRNOG00000024077) #35	Mtrf1l (ENSRNOG00000018773) #36	Rgs17 (ENSRNOG00000018690) #37	AABR07001408.1 (ENSRNOG00000033265)	ENSRNOG00000070385	Oprm1 (ENSRNOG00000018191)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1401													Iyd (ENSNGAG00000000377) #20	ENSNGAG00000010901	Plekhg1 (ENSNGAG00000002088) #21	Mthfd1l (ENSNGAG00000014110) #22	Akap12 (ENSNGAG00000001974) #23	Zbtb2 (ENSNGAG00000001004) #24	Rmnd1 (ENSNGAG00000003570) #25	Armt1 (ENSNGAG00000020620) #26	Ccdc170 (ENSNGAG00000013308) #27	ENSNGAG00000001180	Esr1 (ENSNGAG00000017049) #28	ENSNGAG00000000637 #32
Lesser Egyptian jerboa	MODERN SPECIES	44	Samd5 (ENSJJAG00000022729)	Sash1 (ENSJJAG00000009813)	Ust (ENSJJAG00000020630)	Tab2 (ENSJJAG00000008679)	Ppil4 (ENSJJAG00000017619) #9	Ginm1 (ENSJJAG00000010543) #10	ENSJJAG00000021207 #11	Lats1 (ENSJJAG00000019456) #13	Nup43 (ENSJJAG00000012578) #15	Pcmt1 (ENSJJAG00000023560) #16	Lrp11 (ENSJJAG00000024401)	ENSJJAG00000018910	Ppp1r14c (ENSJJAG00000020290)	ENSJJAG00000024322 #20	Plekhg1 (ENSJJAG00000023794) #21	Mthfd1l (ENSJJAG00000014266) #22	Akap12 (ENSJJAG00000021521) #23	Zbtb2 (ENSJJAG00000016308) #24	Rmnd1 (ENSJJAG00000008798) #25	ENSJJAG00000015720 ##26	ENSJJAG00000011473 #27	Esr1 (ENSJJAG00000015406) #28	ENSJJAG00000010411 #28	Syne1 (ENSJJAG00000014032) #32	Myct1 (ENSJJAG00000022731) #33	Vip (ENSJJAG00000018682) #34	ENSJJAG00000005271	Fbxo5 (ENSJJAG00000006490) #35	Mtrf1l (ENSJJAG00000024141) #36	Rgs17 (ENSJJAG00000009873) #37	Ipcef1 (ENSJJAG00000001014)
Kangaroo rat	MODERN SPECIES	417	Ust (ENSDORG00000015868)	Tab2 (ENSDORG00000000707)	ENSDORG00000027483 #7	Ppil4 (ENSDORG00000007186) #9	Ginm1 (ENSDORG00000007187) #10	ENSDORG00000025692 #11	ENSDORG00000029134 #11	Lats1 (ENSDORG00000007190) #13	ENSDORG00000002203 #15	Pcmt1 (ENSDORG00000003137) #16	Lrp11 (ENSDORG00000003139)	ENSDORG00000023774	Ppp1r14c (ENSDORG00000029153)	Iyd (ENSDORG00000016201) #20	ENSDORG00000029716 #21	Mthfd1l (ENSDORG00000006234) #22	Zbtb2 (ENSDORG00000013305) #24	ENSDORG00000025869 #25	ENSDORG00000000434 #26	Ccdc170 (ENSDORG00000014673) #27	Esr1 (ENSDORG00000010443) #28	Syne1 (ENSDORG00000013226) #32	Myct1 (ENSDORG00000027276) #33	Vip (ENSDORG00000015940) #34	Fbxo5 (ENSDORG00000000495) #35	Mtrf1l (ENSDORG00000010997) #36	Rgs17 (ENSDORG00000011002) #37	Oprm1 (ENSDORG00000002315)	Ipcef1 (ENSDORG00000023655)	Cnksr3 (ENSDORG00000008824)	ENSDORG00000027053
Lagomorpha	ANCESTRAL SPECIES	64													ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Rabbit	MODERN SPECIES	3	ENSOCUG00000033708	ENSOCUG00000029781	ENSOCUG00000026403	ENSOCUG00000030379	ADGB (ENSOCUG00000021202)	STXBP5 (ENSOCUG00000005905)	ENSOCUG00000034641	ENSOCUG00000030086	ENSOCUG00000031631	ENSOCUG00000023412	SASH1 (ENSOCUG00000013851)	ENSOCUG00000027879 #18	ENSOCUG00000013406 #18	IYD (ENSOCUG00000013408) #20	PLEKHG1 (ENSOCUG00000016898) #21	MTHFD1L (ENSOCUG00000002781) #22	AKAP12 (ENSOCUG00000002673) #23	ZBTB2 (ENSOCUG00000022931) #24	RMND1 (ENSOCUG00000002509) #25	ARMT1 (ENSOCUG00000002519) #26	ENSOCUG00000036064	CCDC170 (ENSOCUG00000013530) #27	ENSOCUG00000022327	ESR1 (ENSOCUG00000004829) #28	SYNE1 (ENSOCUG00000023878) #32	ENSOCUG00000038464	MYCT1 (ENSOCUG00000017753) #33	VIP (ENSOCUG00000000513) #34	FBXO5 (ENSOCUG00000000061) #35	ENSOCUG00000000063 #36	RGS17 (ENSOCUG00000021054) #37
Pika	MODERN SPECIES	617															PLEKHG1 (ENSOPRG00000010816) #21	MTHFD1L (ENSOPRG00000010844) #22
Tree shrew	MODERN SPECIES	980																MTHFD1L (ENSTBEG00000010051) #22	ENSTBEG00000010342 #23
Primates	ANCESTRAL SPECIES	5	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.b ##19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Lemuriformes_a	ANCESTRAL SPECIES	28	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.b ##19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Coquerels sifaka	MODERN SPECIES	633	TAB2 (ENSPCOG00000023142)	ZC3H12D (ENSPCOG00000017645) #7	PPIL4 (ENSPCOG00000016997) #9	GINM1 (ENSPCOG00000005553) #10	KATNA1 (ENSPCOG00000020880) #11	ENSPCOG00000026729	LATS1 (ENSPCOG00000018478) #13	NUP43 (ENSPCOG00000027486) #15	PCMT1 (ENSPCOG00000019203) #16	LRP11 (ENSPCOG00000017776)	ENSPCOG00000027781 ##19	ENSPCOG00000026119 ##19	PPP1R14C (ENSPCOG00000015939)	IYD (ENSPCOG00000026393) #20	PLEKHG1 (ENSPCOG00000020861) #21	MTHFD1L (ENSPCOG00000001632) #22	AKAP12 (ENSPCOG00000016860) #23	ZBTB2 (ENSPCOG00000000698) #24	RMND1 (ENSPCOG00000014323) #25	ARMT1 (ENSPCOG00000022613) #26
Greater bamboo lemur	MODERN SPECIES	662	SASH1 (ENSPSMG00000019391)	UST (ENSPSMG00000019453)	TAB2 (ENSPSMG00000019496)	ZC3H12D (ENSPSMG00000019522) #7	PPIL4 (ENSPSMG00000019538) #9	GINM1 (ENSPSMG00000019547) #10	KATNA1 (ENSPSMG00000019600) #11	LATS1 (ENSPSMG00000019622) #13	NUP43 (ENSPSMG00000019639) #15	PCMT1 (ENSPSMG00000019845) #16	LRP11 (ENSPSMG00000019915)	ENSPSMG00000019973 ##19	PPP1R14C (ENSPSMG00000019988)	IYD (ENSPSMG00000020030) #20	PLEKHG1 (ENSPSMG00000020047) #21	MTHFD1L (ENSPSMG00000020197) #22	AKAP12 (ENSPSMG00000020300) #23	ZBTB2 (ENSPSMG00000020305) #24	RMND1 (ENSPSMG00000020327) #25	ARMT1 (ENSPSMG00000020363) #26	CCDC170 (ENSPSMG00000020376) #27	ENSPSMG00000020377	ESR1 (ENSPSMG00000020487) #28	SYNE1 (ENSPSMG00000021005) #32	MYCT1 (ENSPSMG00000021158) #33	VIP (ENSPSMG00000021172) #34	FBXO5 (ENSPSMG00000021196) #35	MTRF1L (ENSPSMG00000021227) #36	RGS17 (ENSPSMG00000021243) #37	ENSPSMG00000021248	OPRM1 (ENSPSMG00000021308)
Mouse lemur	MODERN SPECIES	28	TAB2 (ENSMICG00000027001)	ZC3H12D (ENSMICG00000044838) #7	PPIL4 (ENSMICG00000006287) #9	GINM1 (ENSMICG00000006295) #10	KATNA1 (ENSMICG00000006299) #11	LATS1 (ENSMICG00000006305) #13	NUP43 (ENSMICG00000006312) #15	PCMT1 (ENSMICG00000006318) #16	LRP11 (ENSMICG00000006322)	ENSMICG00000042667 ##19	PPP1R14C (ENSMICG00000038749)	ENSMICG00000045223	ENSMICG00000026491	IYD (ENSMICG00000004582) #20	PLEKHG1 (ENSMICG00000004593) #21	MTHFD1L (ENSMICG00000004610) #22	AKAP12 (ENSMICG00000034625) #23	ZBTB2 (ENSMICG00000027366) #24	RMND1 (ENSMICG00000010583) #25	ARMT1 (ENSMICG00000047928) #26	CCDC170 (ENSMICG00000029885) #27	ESR1 (ENSMICG00000007592) #28	SYNE1 (ENSMICG00000007620) #32	ENSMICG00000042037	MYCT1 (ENSMICG00000036362) #33	VIP (ENSMICG00000035122) #34	ENSMICG00000032018	FBXO5 (ENSMICG00000003809) #35	MTRF1L (ENSMICG00000003811) #36	RGS17 (ENSMICG00000003816) #37	OPRM1 (ENSMICG00000030084)
Bushbaby	MODERN SPECIES	241												ENSOGAG00000025001 ##19	PPP1R14C (ENSOGAG00000009514)	IYD (ENSOGAG00000006759) #20	PLEKHG1 (ENSOGAG00000033661) #21	MTHFD1L (ENSOGAG00000011273) #22	AKAP12 (ENSOGAG00000011277) #23	ZBTB2 (ENSOGAG00000005262) #24	RMND1 (ENSOGAG00000005263) #25	ARMT1 (ENSOGAG00000010684) #26	CCDC170 (ENSOGAG00000006312) #27	ESR1 (ENSOGAG00000012580) #28	SYNE1 (ENSOGAG00000012587) #32	MYCT1 (ENSOGAG00000005357) #33	VIP (ENSOGAG00000006513) #34	FBXO5 (ENSOGAG00000006519) #35	MTRF1L (ENSOGAG00000006521) #36	RGS17 (ENSOGAG00000006526) #37	OPRM1 (ENSOGAG00000011506)	IPCEF1 (ENSOGAG00000011510)	CNKSR3 (ENSOGAG00000011512)
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT00950000185143	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000156283 #9	ENSGT00390000008099.w.b.a.b	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00930000151026.h	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d.db #37	ENSGT00940000158236	ENSGT00940000154428.b
Cebidae	ANCESTRAL SPECIES	5	ENSGT00390000008099.w.b.a.b	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b.c.a #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.a #18	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00930000151026.h	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d.db #37	ENSGT00940000158236	ENSGT00940000154428.b
Cebidae_a	ANCESTRAL SPECIES	26	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b.c.a #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.a #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00930000151026.h	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d.db #37	ENSGT00940000158236	ENSGT00940000154428.b
Capuchin	MODERN SPECIES	6														IYD (ENSCCAG00000036983) #20	PLEKHG1 (ENSCCAG00000027481) #21	MTHFD1L (ENSCCAG00000033752) #22	AKAP12 (ENSCCAG00000030534) #23	ZBTB2 (ENSCCAG00000029241) #24	RMND1 (ENSCCAG00000036014) #25	ARMT1 (ENSCCAG00000027013) #26	CCDC170 (ENSCCAG00000035936) #27	ENSCCAG00000036007	ENSCCAG00000023199	ESR1 (ENSCCAG00000030983) #28	SYNE1 (ENSCCAG00000034147) #32	MYCT1 (ENSCCAG00000031493) #33	VIP (ENSCCAG00000034128) #34	FBXO5 (ENSCCAG00000035526) #35	MTRF1L (ENSCCAG00000035144) #36	RGS17 (ENSCCAG00000030080) #37	OPRM1 (ENSCCAG00000025874)
Bolivian squirrel monkey	MODERN SPECIES	227	PPIL4 (ENSSBOG00000004498) #9	ENSSBOG00000020020	GINM1 (ENSSBOG00000025996) #10	KATNA1 (ENSSBOG00000024196) #11	LATS1 (ENSSBOG00000021131) #13	NUP43 (ENSSBOG00000026083) #15	PCMT1 (ENSSBOG00000020341) #16	ENSSBOG00000012890	LRP11 (ENSSBOG00000022204)	ENSSBOG00000012710 ##19	ENSSBOG00000034441	ULBP3 (ENSSBOG00000032354) #18	PPP1R14C (ENSSBOG00000028293)	IYD (ENSSBOG00000026146) #20	PLEKHG1 (ENSSBOG00000022607) #21	MTHFD1L (ENSSBOG00000024137) #22	AKAP12 (ENSSBOG00000029667) #23	ZBTB2 (ENSSBOG00000024551) #24	ENSSBOG00000020712	RMND1 (ENSSBOG00000021941) #25	ARMT1 (ENSSBOG00000019971) #26	CCDC170 (ENSSBOG00000026119) #27	ENSSBOG00000029729 #28
Marmoset	MODERN SPECIES	16	ENSCJAG00000070682	KATNA1 (ENSCJAG00000019640) #11	ENSCJAG00000078434	LATS1 (ENSCJAG00000009197) #13	NUP43 (ENSCJAG00000009221) #15	ENSCJAG00000009230 #16	LRP11 (ENSCJAG00000009284)	ENSCJAG00000060913	ENSCJAG00000021540 #19	ENSCJAG00000077951 #18	ENSCJAG00000013469 #18	ENSCJAG00000084847 ##19	ENSCJAG00000077421	IYD (ENSCJAG00000013438) #20	PLEKHG1 (ENSCJAG00000013414) #21	MTHFD1L (ENSCJAG00000013404) #22	AKAP12 (ENSCJAG00000013402) #23	ZBTB2 (ENSCJAG00000057010) #24	RMND1 (ENSCJAG00000013350) #25	ARMT1 (ENSCJAG00000013343) #26	CCDC170 (ENSCJAG00000013339) #27	ESR1 (ENSCJAG00000013293) #28	SYNE1 (ENSCJAG00000012842) #32	ENSCJAG00000073970	ENSCJAG00000083311	VIP (ENSCJAG00000012816) #34	FBXO5 (ENSCJAG00000012799) #35	MTRF1L (ENSCJAG00000044179) #36	RGS17 (ENSCJAG00000012783) #37	ENSCJAG00000084075	ENSCJAG00000078595
Mas night monkey	MODERN SPECIES	265	GINM1 (ENSANAG00000031958) #10	KATNA1 (ENSANAG00000037899) #11	LATS1 (ENSANAG00000035394) #13	NUP43 (ENSANAG00000029616) #15	PCMT1 (ENSANAG00000022532) #16	LRP11 (ENSANAG00000038127)	RAET1E (ENSANAG00000000268) #19	ENSANAG00000026085 ##19	ENSANAG00000033944 #18	ENSANAG00000036412 ##19	ENSANAG00000024161	ENSANAG00000022159 #18	PPP1R14C (ENSANAG00000020628)	IYD (ENSANAG00000029610) #20	PLEKHG1 (ENSANAG00000027450) #21	MTHFD1L (ENSANAG00000020601) #22	ENSANAG00000028041	AKAP12 (ENSANAG00000033578) #23	ZBTB2 (ENSANAG00000035402) #24	RMND1 (ENSANAG00000029850) #25	ARMT1 (ENSANAG00000027746) #26	CCDC170 (ENSANAG00000034546) #27	ESR1 (ENSANAG00000033920) #28	ENSANAG00000032083	SYNE1 (ENSANAG00000028713) #32	MYCT1 (ENSANAG00000028766) #33	VIP (ENSANAG00000033466) #34	ENSANAG00000026755	FBXO5 (ENSANAG00000000307) #35	MTRF1L (ENSANAG00000007078) #36	RGS17 (ENSANAG00000020543) #37
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Cercopithecidae	ANCESTRAL SPECIES	34							ENSGT01100000263517.b.d.m.a.a.a.a.c.r #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.f #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.b.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683.l.b #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.b.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.b.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.e ##19	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.b #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.f #18	ENSGT00980000198488.m.a.a.a.a.k.a.d.b	ENSGT00980000198488.n	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683.l.b #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000004803.g #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.b.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.b #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.f #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00860000135570.b	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b.g.a #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683.l.b #36	ENSGT00940000155393.d #37	ENSGT00940000158236
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.b.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.b #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.f #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.d ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00860000135570.b	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b.g.a #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683.l.b #36	ENSGT00940000155393.d #37	ENSGT00940000158236
Cercopithecinae_d	ANCESTRAL SPECIES	35	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.d ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.b.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.b #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.f #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00860000135570.b	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b.g.a #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683.l.b #36	ENSGT00940000155393.d #37	ENSGT00940000158236
Drill	MODERN SPECIES	988								ENSMLEG00000035766 ##19	ENSMLEG00000041030 #19	ENSMLEG00000035901 #18	ENSMLEG00000040201 ##19	ENSMLEG00000043858 #18	PPP1R14C (ENSMLEG00000017778)	IYD (ENSMLEG00000034675) #20	PLEKHG1 (ENSMLEG00000035613) #21	MTHFD1L (ENSMLEG00000022231) #22	ENSMLEG00000032974	ENSMLEG00000029149	AKAP12 (ENSMLEG00000040090) #23	ZBTB2 (ENSMLEG00000044102) #24	RMND1 (ENSMLEG00000030164) #25	ENSMLEG00000041144 #26	CCDC170 (ENSMLEG00000031341) #27
Sooty mangabey	MODERN SPECIES	139	RAET1E (ENSCATG00000016606) #19	ENSCATG00000035394 ##19	ENSCATG00000028977 ##19	ENSCATG00000033518 ##19	ENSCATG00000041114 ##19	ENSCATG00000043854 ##19	ENSCATG00000034417 ##19	ENSCATG00000043944 ##19	ENSCATG00000032541 #19	ENSCATG00000036127 #18	ENSCATG00000036981 ##19	ENSCATG00000012147 #18	PPP1R14C (ENSCATG00000033340)	IYD (ENSCATG00000043048) #20	PLEKHG1 (ENSCATG00000037764) #21	MTHFD1L (ENSCATG00000042071) #22	ENSCATG00000041374	ENSCATG00000042437	AKAP12 (ENSCATG00000029672) #23	ZBTB2 (ENSCATG00000031949) #24	RMND1 (ENSCATG00000032389) #25	ARMT1 (ENSCATG00000043831) #26	CCDC170 (ENSCATG00000031654) #27	ESR1 (ENSCATG00000030182) #28	SYNE1 (ENSCATG00000040903) #32	MYCT1 (ENSCATG00000032119) #33	VIP (ENSCATG00000032792) #34	FBXO5 (ENSCATG00000045339) #35	ENSCATG00000035276 #36	RGS17 (ENSCATG00000040739) #37	OPRM1 (ENSCATG00000029597)
Olive baboon	MODERN SPECIES	16	ENSPANG00000023895 ##19	ENSPANG00000031738 ##19	ENSPANG00000051179 ##19	ENSPANG00000024446 ##19	ENSPANG00000042861	ENSPANG00000050508 ##19	ENSPANG00000030194 ##19	ENSPANG00000050994 #19	ENSPANG00000047095	ENSPANG00000013265 ##19	ULBP3 (ENSPANG00000006926) #18	PPP1R14C (ENSPANG00000048658)	IYD (ENSPANG00000026300) #20	ENSPANG00000038252	PLEKHG1 (ENSPANG00000009444) #21	MTHFD1L (ENSPANG00000024767) #22	AKAP12 (ENSPANG00000018393) #23	ZBTB2 (ENSPANG00000046901) #24	RMND1 (ENSPANG00000018391) #25	ARMT1 (ENSPANG00000006927) #26	CCDC170 (ENSPANG00000001110) #27	ENSPANG00000050683	ESR1 (ENSPANG00000020729) #28	SYNE1 (ENSPANG00000024958) #32	MYCT1 (ENSPANG00000026234) #33	VIP (ENSPANG00000004077) #34	FBXO5 (ENSPANG00000046787) #35	MTRF1L (ENSPANG00000033150) #36	RGS17 (ENSPANG00000022190) #37	ENSPANG00000050384	OPRM1 (ENSPANG00000005833)
Macaca	ANCESTRAL SPECIES	9	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.b.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.b #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.f #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00860000135570.b	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b.g.a #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683.l.b #36	ENSGT00940000155393.d #37	ENSGT00940000158236
Pig-tailed macaque	MODERN SPECIES	152	ENSMNEG00000037239 #15	PCMT1 (ENSMNEG00000039792) #16	LRP11 (ENSMNEG00000032784)	RAET1E (ENSMNEG00000033358) #19	ENSMNEG00000033789 ##19	ENSMNEG00000033916 ##19	ULBP1 (ENSMNEG00000036370) ##19	ENSMNEG00000037543 ##19	ENSMNEG00000030286 #19	ENSMNEG00000029044 #18	ENSMNEG00000041766 ##19	ENSMNEG00000022408 #18	PPP1R14C (ENSMNEG00000029660)	IYD (ENSMNEG00000035661) #20	PLEKHG1 (ENSMNEG00000027854) #21	MTHFD1L (ENSMNEG00000039466) #22	ENSMNEG00000028201	ENSMNEG00000027441	AKAP12 (ENSMNEG00000037368) #23	ZBTB2 (ENSMNEG00000043530) #24	RMND1 (ENSMNEG00000039525) #25	ARMT1 (ENSMNEG00000027559) #26	CCDC170 (ENSMNEG00000021323) #27	ESR1 (ENSMNEG00000033178) #28	SYNE1 (ENSMNEG00000030564) #32	MYCT1 (ENSMNEG00000044362) #33	VIP (ENSMNEG00000027106) #34	FBXO5 (ENSMNEG00000036254) #35	ENSMNEG00000030044 #36	RGS17 (ENSMNEG00000039093) #37	SLC24A2 (ENSMNEG00000031804)
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.b.a ##19	ENSGT00980000198488.n	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.c.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.b #19	ENSGT00950000185143	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.f #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.a.a.b ##19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.b.b.a.a.a.a.b	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b.g.a #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT01050000244986.a.b.a.a	ENSGT00530000063692.b #35	ENSGT00940000155683.l.b #36	ENSGT00940000155393.d #37	ENSGT00940000158236
Crab-eating macaque	MODERN SPECIES	14	PCMT1 (ENSMFAG00000040746) #16	ENSMFAG00000058722	RAET1E (ENSMFAG00000001578) #19	ENSMFAG00000026933 ##19	ENSMFAG00000062093 ##19	ENSMFAG00000044948 ##19	ENSMFAG00000032584	ENSMFAG00000065712 ##19	ENSMFAG00000039565 ##19	ENSMFAG00000042568 #19	ULBP3 (ENSMFAG00000002019) #18	ENSMFAG00000042333 ##19	PPP1R14C (ENSMFAG00000001889)	IYD (ENSMFAG00000031023) #20	PLEKHG1 (ENSMFAG00000043598) #21	MTHFD1L (ENSMFAG00000031281) #22	ENSMFAG00000052108	ENSMFAG00000063261	ENSMFAG00000063226	AKAP12 (ENSMFAG00000039897) #23	ZBTB2 (ENSMFAG00000031487) #24	RMND1 (ENSMFAG00000034583) #25	ENSMFAG00000035719 #26	CCDC170 (ENSMFAG00000034314) #27	ESR1 (ENSMFAG00000033966) #28	SYNE1 (ENSMFAG00000037479) #32	ENSMFAG00000057449	ENSMFAG00000057221	ENSMFAG00000063235	MYCT1 (ENSMFAG00000055463) #33	VIP (ENSMFAG00000040930) #34
Rhesus	MODERN SPECIES	14	LRP11 (ENSMMUG00000029463)	RAET1E (ENSMMUG00000003953) #19	ENSMMUG00000053480 ##19	ENSMMUG00000029465 ##19	ENSMMUG00000063631 ##19	ENSMMUG00000000923	ENSMMUG00000065098 ##19	ENSMMUG00000003951 ##19	ENSMMUG00000052092	ENSMMUG00000063037	ULBP3 (ENSMMUG00000047033) #18	ENSMMUG00000029466 ##19	PPP1R14C (ENSMMUG00000022110)	IYD (ENSMMUG00000010802) #20	PLEKHG1 (ENSMMUG00000019772) #21	MTHFD1L (ENSMMUG00000019774) #22	AKAP12 (ENSMMUG00000023265) #23	ENSMMUG00000058018	ZBTB2 (ENSMMUG00000029475) #24	ENSMMUG00000050174	RMND1 (ENSMMUG00000018342) #25	ARMT1 (ENSMMUG00000060940) #26	CCDC170 (ENSMMUG00000018346) #27	ESR1 (ENSMMUG00000019045) #28	SYNE1 (ENSMMUG00000019048) #32	MYCT1 (ENSMMUG00000019073) #33	VIP (ENSMMUG00000019074) #34	ENSMMUG00000058069	FBXO5 (ENSMMUG00000019076) #35	MTRF1L (ENSMMUG00000020178) #36	RGS17 (ENSMMUG00000019078) #37
Vervet Monkey	MODERN SPECIES	4	FAXC (ENSCSAG00000014566)	FBXL4 (ENSCSAG00000014559)	POU3F2 (ENSCSAG00000018978)	ENSCSAG00000018979	MMS22L (ENSCSAG00000014547)	KLHL32 (ENSCSAG00000014531)	NDUFAF4 (ENSCSAG00000014517)	GPR63 (ENSCSAG00000018980)	ENSCSAG00000014508	FHL5 (ENSCSAG00000014491)	UFL1 (ENSCSAG00000014473)	ULBP3 (ENSCSAG00000014456) #18	PPP1R14C (ENSCSAG00000014450)	IYD (ENSCSAG00000014444) #20	PLEKHG1 (ENSCSAG00000014433) #21	MTHFD1L (ENSCSAG00000014394) #22	ENSCSAG00000014290	AKAP12 (ENSCSAG00000014270) #23	ZBTB2 (ENSCSAG00000014259) #24	RMND1 (ENSCSAG00000014250) #25	ARMT1 (ENSCSAG00000014244) #26	CCDC170 (ENSCSAG00000014238) #27	ESR1 (ENSCSAG00000014236) #28	SYNE1 (ENSCSAG00000014028) #32	ENSCSAG00000018981	MYCT1 (ENSCSAG00000013534) #33	VIP (ENSCSAG00000013530) #34	FBXO5 (ENSCSAG00000013521) #35	MTRF1L (ENSCSAG00000013511) #36	RGS17 (ENSCSAG00000013490) #37	OPRM1 (ENSCSAG00000013480)
Rhinopithecus	ANCESTRAL SPECIES	298								ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.c.r #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.f #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.f.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.e #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00940000153336.e.a.a.a.b.b	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34
Golden snub-nosed monkey	MODERN SPECIES	2440								ENSRROG00000040376 ##19	ENSRROG00000043406 #19	ENSRROG00000045078 #18	ENSRROG00000027630 ##19	ENSRROG00000010004 #18	PPP1R14C (ENSRROG00000029040)	IYD (ENSRROG00000044909) #20	PLEKHG1 (ENSRROG00000044362) #21	MTHFD1L (ENSRROG00000030571) #22	ENSRROG00000030278	AKAP12 (ENSRROG00000038530) #23	ZBTB2 (ENSRROG00000041204) #24	RMND1 (ENSRROG00000036148) #25	ARMT1 (ENSRROG00000007841) #26	CCDC170 (ENSRROG00000039988) #27	ENSRROG00000045062 #28
Black snub-nosed monkey	MODERN SPECIES	873								ENSRBIG00000035145 ##19	ENSRBIG00000000894 #19	ENSRBIG00000031095 #18	ENSRBIG00000028119 ##19	ENSRBIG00000039779 #18	PPP1R14C (ENSRBIG00000034753)	IYD (ENSRBIG00000011296) #20	PLEKHG1 (ENSRBIG00000009483) #21	MTHFD1L (ENSRBIG00000042332) #22	ENSRBIG00000038114	AKAP12 (ENSRBIG00000017303) #23	ZBTB2 (ENSRBIG00000031111) #24	RMND1 (ENSRBIG00000036401) #25	ARMT1 (ENSRBIG00000029058) #26	ESR1 (ENSRBIG00000009095) #28	ENSRBIG00000006739 #32	ENSRBIG00000032089 #31
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.g ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Hominidae	ANCESTRAL SPECIES	5	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.g ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.g ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Gorilla	MODERN SPECIES	19	LATS1 (ENSGGOG00000000545) #13	ENSGGOG00000043276 #14	ENSGGOG00000037154 #14	NUP43 (ENSGGOG00000007299) #15	ENSGGOG00000042835 #16	LRP11 (ENSGGOG00000024974)	RAET1E (ENSGGOG00000009347) #19	ENSGGOG00000016690 ##19	ULBP1 (ENSGGOG00000036889) ##19	ENSGGOG00000007707 ##19	ENSGGOG00000007925 ##19	ULBP3 (ENSGGOG00000003891) #18	ENSGGOG00000026573	IYD (ENSGGOG00000036276) #20	PLEKHG1 (ENSGGOG00000014887) #21	MTHFD1L (ENSGGOG00000003642) #22	AKAP12 (ENSGGOG00000024737) #23	ZBTB2 (ENSGGOG00000010529) #24	RMND1 (ENSGGOG00000007148) #25	ARMT1 (ENSGGOG00000023947) #26	CCDC170 (ENSGGOG00000004497) #27	ESR1 (ENSGGOG00000009678) #28	SYNE1 (ENSGGOG00000014892) #32	ENSGGOG00000042786 #33	VIP (ENSGGOG00000028135) #34	FBXO5 (ENSGGOG00000001606) #35	MTRF1L (ENSGGOG00000022451) #36	RGS17 (ENSGGOG00000026033) #37	OPRM1 (ENSGGOG00000024312)	IPCEF1 (ENSGGOG00000015698)	CNKSR3 (ENSGGOG00000001228)
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.g ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Human	MODERN SPECIES	18	GINM1 (ENSG00000055211) #10	KATNA1 (ENSG00000186625) #11	LATS1 (ENSG00000131023) #13	NUP43 (ENSG00000120253) #15	PCMT1 (ENSG00000120265) #16	LRP11 (ENSG00000120256)	RAET1E (ENSG00000164520) #19	RAET1G (ENSG00000203722) ##19	ULBP2 (ENSG00000131015) ##19	ULBP1 (ENSG00000111981) ##19	RAET1L (ENSG00000155918) ##19	ULBP3 (ENSG00000131019) #18	PPP1R14C (ENSG00000198729)	IYD (ENSG00000009765) #20	PLEKHG1 (ENSG00000120278) #21	MTHFD1L (ENSG00000120254) #22	AKAP12 (ENSG00000131016) #23	ZBTB2 (ENSG00000181472) #24	RMND1 (ENSG00000155906) #25	ARMT1 (ENSG00000146476) #26	CCDC170 (ENSG00000120262) #27	ESR1 (ENSG00000091831) #28	SYNE1 (ENSG00000131018) #32	MYCT1 (ENSG00000120279) #33	VIP (ENSG00000146469) #34	FBXO5 (ENSG00000112029) #35	MTRF1L (ENSG00000112031) #36	RGS17 (ENSG00000091844) #37	OPRM1 (ENSG00000112038)	IPCEF1 (ENSG00000074706)	ENSG00000288520
Pan	ANCESTRAL SPECIES	5	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.q.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.g ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.a.a ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.a.b.h.b ##19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000154295.y.b.f	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00390000005534.b.b.c.b.a.a.b.a.a.d.b.b	ENSGT00940000158236	ENSGT00940000154428.b
Bonobo	MODERN SPECIES	19	ENSPPAG00000027601 #10	KATNA1 (ENSPPAG00000042653) #11	LATS1 (ENSPPAG00000036080) #13	NUP43 (ENSPPAG00000042531) #15	ENSPPAG00000027167 #16	LRP11 (ENSPPAG00000010780)	RAET1E (ENSPPAG00000028551) #19	ENSPPAG00000014931 ##19	ULBP1 (ENSPPAG00000041468) ##19	ENSPPAG00000012588 ##19	ULBP3 (ENSPPAG00000030872) #18	ENSPPAG00000038058	IYD (ENSPPAG00000035207) #20	PLEKHG1 (ENSPPAG00000040411) #21	ENSPPAG00000038707	MTHFD1L (ENSPPAG00000034031) #22	ENSPPAG00000029607	AKAP12 (ENSPPAG00000027286) #23	ZBTB2 (ENSPPAG00000033109) #24	RMND1 (ENSPPAG00000034708) #25	ARMT1 (ENSPPAG00000030485) #26	CCDC170 (ENSPPAG00000043973) #27	ESR1 (ENSPPAG00000025747) #28	SYNE1 (ENSPPAG00000027499) #32	MYCT1 (ENSPPAG00000028230) #33	VIP (ENSPPAG00000031048) #34	FBXO5 (ENSPPAG00000017794) #35	MTRF1L (ENSPPAG00000031251) #36	RGS17 (ENSPPAG00000036399) #37	ENSPPAG00000039443	OPRM1 (ENSPPAG00000041853)
Chimpanzee	MODERN SPECIES	19	KATNA1 (ENSPTRG00000018694) #11	LATS1 (ENSPTRG00000018696) #13	NUP43 (ENSPTRG00000018697) #15	PCMT1 (ENSPTRG00000018699) #16	LRP11 (ENSPTRG00000018700)	RAET1E (ENSPTRG00000022565) #19	RAET1G (ENSPTRG00000029377) ##19	ENSPTRG00000052558 ##19	ULBP1 (ENSPTRG00000043696) ##19	ENSPTRG00000044735 ##19	ULBP3 (ENSPTRG00000034286) #18	PPP1R14C (ENSPTRG00000023599)	IYD (ENSPTRG00000051321) #20	PLEKHG1 (ENSPTRG00000018709) #21	ENSPTRG00000044725	ENSPTRG00000018710 #22	ENSPTRG00000049112	ENSPTRG00000051736	AKAP12 (ENSPTRG00000018711) #23	ZBTB2 (ENSPTRG00000018712) #24	RMND1 (ENSPTRG00000018713) #25	ARMT1 (ENSPTRG00000018714) #26	CCDC170 (ENSPTRG00000018715) #27	ESR1 (ENSPTRG00000018716) #28	SYNE1 (ENSPTRG00000018717) #32	MYCT1 (ENSPTRG00000018719) #33	VIP (ENSPTRG00000018720) #34	FBXO5 (ENSPTRG00000018721) #35	MTRF1L (ENSPTRG00000018722) #36	RGS17 (ENSPTRG00000029367) #37	ENSPTRG00000034202
Orangutan	MODERN SPECIES	19	GINM1 (ENSPPYG00000017088) #10	KATNA1 (ENSPPYG00000017090) #11	LATS1 (ENSPPYG00000017091) #13	NUP43 (ENSPPYG00000017092) #15	PCMT1 (ENSPPYG00000032523) #16	LRP11 (ENSPPYG00000017096)	RAET1E (ENSPPYG00000017097) #19	ENSPPYG00000017098 ##19	ENSPPYG00000017099 ##19	ULBP1 (ENSPPYG00000017100) ##19	ENSPPYG00000017101 ##19	ULBP3 (ENSPPYG00000017268) #18	PPP1R14C (ENSPPYG00000017102)	IYD (ENSPPYG00000017103) #20	PLEKHG1 (ENSPPYG00000017104) #21	MTHFD1L (ENSPPYG00000017105) #22	AKAP12 (ENSPPYG00000017106) #23	ZBTB2 (ENSPPYG00000017107) #24	RMND1 (ENSPPYG00000017108) #25	ARMT1 (ENSPPYG00000017109) #26	ENSPPYG00000017110	CCDC170 (ENSPPYG00000017111) #27	ESR1 (ENSPPYG00000017112) #28	SYNE1 (ENSPPYG00000017113) #32	MYCT1 (ENSPPYG00000017114) #33	VIP (ENSPPYG00000017115) #34	FBXO5 (ENSPPYG00000017116) #35	MTRF1L (ENSPPYG00000017117) #36	RGS17 (ENSPPYG00000017118) #37	OPRM1 (ENSPPYG00000029500)	IPCEF1 (ENSPPYG00000017119)
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	112															ENSNLEG00000034692	ENSNLEG00000034018 #22
Gibbon	MODERN SPECIES	18	PPIL4 (ENSNLEG00000015316) #9	GINM1 (ENSNLEG00000035797) #10	KATNA1 (ENSNLEG00000015324) #11	LATS1 (ENSNLEG00000015331) #13	NUP43 (ENSNLEG00000015334) #15	ENSNLEG00000029634 #16	ENSNLEG00000034380	RAET1E (ENSNLEG00000015350) #19	ENSNLEG00000030810 ##19	ULBP1 (ENSNLEG00000015354) ##19	ULBP3 (ENSNLEG00000015356) #18	ENSNLEG00000030972	PPP1R14C (ENSNLEG00000015360)	IYD (ENSNLEG00000015363) #20	PLEKHG1 (ENSNLEG00000015370) #21	MTHFD1L (ENSNLEG00000015374) #22	ENSNLEG00000035383	ENSNLEG00000035803	AKAP12 (ENSNLEG00000015379) #23	ZBTB2 (ENSNLEG00000015384) #24	RMND1 (ENSNLEG00000015387) #25	ARMT1 (ENSNLEG00000015395) #26	CCDC170 (ENSNLEG00000015396) #27	ESR1 (ENSNLEG00000015408) #28	SYNE1 (ENSNLEG00000015419) #32	ENSNLEG00000035305 #33	VIP (ENSNLEG00000015432) #34	FBXO5 (ENSNLEG00000015443) #35	MTRF1L (ENSNLEG00000015450) #36	RGS17 (ENSNLEG00000015461) #37	OPRM1 (ENSNLEG00000015467)
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	7111															PLEKHG1 (ENSTSYG00000012891) #21	ENSTSYG00000028060 #22	ENSTSYG00000026428	SLC45A3 (ENSTSYG00000010698)	ELK4 (ENSTSYG00000012631)	MFSD4A (ENSTSYG00000012613)	CDK18 (ENSTSYG00000006079)	LEMD1 (ENSTSYG00000013708)	KLHDC8A (ENSTSYG00000013270)	NUAK2 (ENSTSYG00000033748)
Tarsier	MODERN SPECIES	1405															ENSTSYG00000025614	ENSTSYG00000004139 #22
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157477 #22
Common shrew	MODERN SPECIES	1505																ENSSARG00000004466 #22
Hedgehog	MODERN SPECIES	2105																ENSEEUG00000001731 #22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Artiodactyla	ANCESTRAL SPECIES	19	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Suina	ANCESTRAL SPECIES	18	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803.e #15	ENSGT00900000143690 #14	ENSGT00390000004803.f #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Pig	MODERN SPECIES		LATS1 (ENSSSCG00000004106) #13	ENSSSCG00000031644 #14	NUP43 (ENSSSCG00000004105) #15	PCMT1 (ENSSSCG00000004103) #16	LRP11 (ENSSSCG00000004101)	ULBP1 (ENSSSCG00000026042) #18	ENSSSCG00000041378 #19	ENSSSCG00000004096 #19	ENSSSCG00000033578 #19	ENSSSCG00000032525 #19	ENSSSCG00000035574 #18	PPP1R14C (ENSSSCG00000004094)	IYD (ENSSSCG00000004093) #20	ENSSSCG00000040966	PLEKHG1 (ENSSSCG00000032778) #21	MTHFD1L (ENSSSCG00000004092) #22	AKAP12 (ENSSSCG00000031733) #23	ZBTB2 (ENSSSCG00000004090) #24	RMND1 (ENSSSCG00000004089) #25	ARMT1 (ENSSSCG00000004088) #26	CCDC170 (ENSSSCG00000004087) #27	ENSSSCG00000046251	ESR1 (ENSSSCG00000025777) #28	ENSSSCG00000004082 #32	ENSSSCG00000049158 #31	ENSSSCG00000004081 #32	MYCT1 (ENSSSCG00000031536) #33	VIP (ENSSSCG00000004078) #34	FBXO5 (ENSSSCG00000004077) #35	MTRF1L (ENSSSCG00000004076) #36	RGS17 (ENSSSCG00000004075) #37
Chacoan peccary	MODERN SPECIES	58	ENSCWAG00000000428 #7	PPIL4 (ENSCWAG00000000404) #9	GINM1 (ENSCWAG00000000374) #10	KATNA1 (ENSCWAG00000000351) #11	LATS1 (ENSCWAG00000000323) #13	ENSCWAG00000000304 #15	NUP43 (ENSCWAG00000000291) #15	PCMT1 (ENSCWAG00000000240) #16	LRP11 (ENSCWAG00000000182)	ENSCWAG00000000157 #19	ENSCWAG00000000130 #18	ENSCWAG00000000084 #18	PPP1R14C (ENSCWAG00000000064)	IYD (ENSCWAG00000000052) #20	PLEKHG1 (ENSCWAG00000000019) #21	MTHFD1L (ENSCWAG00000000009) #22	AKAP12 (ENSCWAG00000008834) #23	ZBTB2 (ENSCWAG00000008811) #24	RMND1 (ENSCWAG00000008762) #25	ARMT1 (ENSCWAG00000008701) #26	CCDC170 (ENSCWAG00000008566) #27	ESR1 (ENSCWAG00000008426) #28	SYNE1 (ENSCWAG00000005922) #32	MYCT1 (ENSCWAG00000005709) #33	VIP (ENSCWAG00000005683) #34	FBXO5 (ENSCWAG00000005639) #35	MTRF1L (ENSCWAG00000005591) #36	RGS17 (ENSCWAG00000005553) #37	IPCEF1 (ENSCWAG00000005502)	OPRM1 (ENSCWAG00000005403)	CNKSR3 (ENSCWAG00000005331)
Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Camelidae	ANCESTRAL SPECIES	37	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Arabian camel	MODERN SPECIES	34	ENSCDRG00005021043 #7	PPIL4 (ENSCDRG00005021029) #9	ENSCDRG00005021020	GINM1 (ENSCDRG00005021015) #10	KATNA1 (ENSCDRG00005021003) #11	LATS1 (ENSCDRG00005020994) #13	ENSCDRG00005020991 #14	NUP43 (ENSCDRG00005020981) #15	PCMT1 (ENSCDRG00005020971) #16	LRP11 (ENSCDRG00005020953)	ENSCDRG00005020939 #19	ENSCDRG00005020920 #18	PPP1R14C (ENSCDRG00005020905)	IYD (ENSCDRG00005020897) #20	PLEKHG1 (ENSCDRG00005020866) #21	MTHFD1L (ENSCDRG00005020831) #22	AKAP12 (ENSCDRG00005020815) #23	ZBTB2 (ENSCDRG00005020809) #24	RMND1 (ENSCDRG00005020798) #25	ARMT1 (ENSCDRG00005020788) #26	CCDC170 (ENSCDRG00005020784) #27	ENSCDRG00005020779 #28	ENSCDRG00005020770 #28	SYNE1 (ENSCDRG00005019486) #32	MYCT1 (ENSCDRG00005019378) #33	VIP (ENSCDRG00005019356) #34	FBXO5 (ENSCDRG00005019337) #35	MTRF1L (ENSCDRG00005019302) #36	RGS17 (ENSCDRG00005019286) #37	OPRM1 (ENSCDRG00005019256)	IPCEF1 (ENSCDRG00005019172)
Alpaca	MODERN SPECIES	3150														IYD (ENSVPAG00000012469) #20	PLEKHG1 (ENSVPAG00000012473) #21	MTHFD1L (ENSVPAG00000012480) #22
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Cetacea	ANCESTRAL SPECIES	18	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000185143	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236
Odontoceti	ANCESTRAL SPECIES	18	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000185143	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Odontoceti_a	ANCESTRAL SPECIES	16	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000185143	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Odontoceti_b	ANCESTRAL SPECIES	18	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT01010000228886	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Monodontidae	ANCESTRAL SPECIES	18	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000185143	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT01010000228886	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Beluga whale	MODERN SPECIES	80	UST (ENSDLEG00000008720)	TAB2 (ENSDLEG00000008743)	ZC3H12D (ENSDLEG00000008768) #7	PPIL4 (ENSDLEG00000008785) #9	GINM1 (ENSDLEG00000008824) #10	KATNA1 (ENSDLEG00000008867) #11	LATS1 (ENSDLEG00000008906) #13	ENSDLEG00000008938 #14	NUP43 (ENSDLEG00000008958) #15	PCMT1 (ENSDLEG00000008988) #16	LRP11 (ENSDLEG00000009046)	ENSDLEG00000009098	ENSDLEG00000009118	IYD (ENSDLEG00000009156) #20	PLEKHG1 (ENSDLEG00000009309) #21	MTHFD1L (ENSDLEG00000009381) #22	AKAP12 (ENSDLEG00000009611) #23	ZBTB2 (ENSDLEG00000009640) #24	RMND1 (ENSDLEG00000009657) #25	ARMT1 (ENSDLEG00000009691) #26	CCDC170 (ENSDLEG00000009713) #27	ESR1 (ENSDLEG00000009792) #28	ENSDLEG00000009813	SYNE1 (ENSDLEG00000010092) #32	MYCT1 (ENSDLEG00000012183) #33	VIP (ENSDLEG00000012194) #34	FBXO5 (ENSDLEG00000012221) #35	MTRF1L (ENSDLEG00000012260) #36	RGS17 (ENSDLEG00000012267) #37	ENSDLEG00000012302	OPRM1 (ENSDLEG00000012316)
Narwhal	MODERN SPECIES	301	UST (ENSMMNG00015009353)	TAB2 (ENSMMNG00015009360)	ZC3H12D (ENSMMNG00015009369) #7	PPIL4 (ENSMMNG00015009380) #9	GINM1 (ENSMMNG00015009391) #10	KATNA1 (ENSMMNG00015009407) #11	LATS1 (ENSMMNG00015009427) #13	ENSMMNG00015009437 #14	NUP43 (ENSMMNG00015009446) #15	PCMT1 (ENSMMNG00015009476) #16	LRP11 (ENSMMNG00015009513)	ENSMMNG00015009542	PPP1R14C (ENSMMNG00015009544)	IYD (ENSMMNG00015009560) #20	PLEKHG1 (ENSMMNG00015009571) #21	MTHFD1L (ENSMMNG00015009588) #22	AKAP12 (ENSMMNG00015009623) #23	ZBTB2 (ENSMMNG00015009627) #24	RMND1 (ENSMMNG00015009633) #25	ARMT1 (ENSMMNG00015009647) #26	ESR1 (ENSMMNG00015009658) #28	ENSMMNG00015009668	SYNE1 (ENSMMNG00015009727) #32	MYCT1 (ENSMMNG00015009810) #33	VIP (ENSMMNG00015009820) #34	FBXO5 (ENSMMNG00015009826) #35	MTRF1L (ENSMMNG00015009848) #36	RGS17 (ENSMMNG00015009868) #37	OPRM1 (ENSMMNG00015009889)	IPCEF1 (ENSMMNG00015009907)	CNKSR3 (ENSMMNG00015009927)
Vaquita	MODERN SPECIES	3	UST (ENSPSNG00000010825)	TAB2 (ENSPSNG00000010769)	ENSPSNG00000010699 #7	PPIL4 (ENSPSNG00000010612) #9	GINM1 (ENSPSNG00000010551) #10	KATNA1 (ENSPSNG00000010475) #11	LATS1 (ENSPSNG00000010422) #13	ENSPSNG00000010371 #14	NUP43 (ENSPSNG00000010302) #15	PCMT1 (ENSPSNG00000010042) #16	LRP11 (ENSPSNG00000009810)	ENSPSNG00000009584 #18	PPP1R14C (ENSPSNG00000022573)	IYD (ENSPSNG00000022571) #20	PLEKHG1 (ENSPSNG00000022563) #21	MTHFD1L (ENSPSNG00000022543) #22	AKAP12 (ENSPSNG00000022535) #23	ZBTB2 (ENSPSNG00000022533) #24	RMND1 (ENSPSNG00000022531) #25	ARMT1 (ENSPSNG00000022528) #26	ENSPSNG00000022515	ESR1 (ENSPSNG00000022511) #28	ENSPSNG00000022502	SYNE1 (ENSPSNG00000022337) #32	MYCT1 (ENSPSNG00000022131) #33	VIP (ENSPSNG00000022117) #34	FBXO5 (ENSPSNG00000022107) #35	MTRF1L (ENSPSNG00000022083) #36	RGS17 (ENSPSNG00000022062) #37	OPRM1 (ENSPSNG00000022034)	IPCEF1 (ENSPSNG00000021988)
Dolphin	MODERN SPECIES	48															PLEKHG1 (ENSTTRG00000006149) #21	MTHFD1L (ENSTTRG00000006156) #22
Sperm whale	MODERN SPECIES	1	UST (ENSPCTG00005000730)	TAB2 (ENSPCTG00005000695)	ENSPCTG00005000658 #7	PPIL4 (ENSPCTG00005000625) #9	GINM1 (ENSPCTG00005000594) #10	ENSPCTG00005000533 #11	LATS1 (ENSPCTG00005007155) #13	ENSPCTG00005007144 #14	NUP43 (ENSPCTG00005007117) #15	PCMT1 (ENSPCTG00005007055) #16	ENSPCTG00005007010	ENSPCTG00005006995	PPP1R14C (ENSPCTG00005006973)	IYD (ENSPCTG00005006834) #20	PLEKHG1 (ENSPCTG00005006762) #21	MTHFD1L (ENSPCTG00005006289) #22	AKAP12 (ENSPCTG00005006212) #23	ZBTB2 (ENSPCTG00005006183) #24	RMND1 (ENSPCTG00005006136) #25	ARMT1 (ENSPCTG00005006118) #26	CCDC170 (ENSPCTG00005006069) #27	ENSPCTG00005006030	ESR1 (ENSPCTG00005005962) #28	SYNE1 (ENSPCTG00005005794) #32	ENSPCTG00005005713 #32	ENSPCTG00005005623 #32	MYCT1 (ENSPCTG00005005562) #33	VIP (ENSPCTG00005005536) #34	FBXO5 (ENSPCTG00005005511) #35	MTRF1L (ENSPCTG00005005476) #36	RGS17 (ENSPCTG00005005451) #37
Blue whale	MODERN SPECIES	3	ZC3H12D (ENSBMSG00010010274) #7	PPIL4 (ENSBMSG00010010254) #9	GINM1 (ENSBMSG00010010234) #10	KATNA1 (ENSBMSG00010010214) #11	LATS1 (ENSBMSG00010010190) #13	ENSBMSG00010010172 #14	NUP43 (ENSBMSG00010010153) #15	PCMT1 (ENSBMSG00010010090) #16	LRP11 (ENSBMSG00010010034)	ENSBMSG00010010009	ENSBMSG00010009982 #18	ENSBMSG00010009953	ENSBMSG00010009935	IYD (ENSBMSG00010009876) #20	PLEKHG1 (ENSBMSG00010009838) #21	MTHFD1L (ENSBMSG00010009772) #22	AKAP12 (ENSBMSG00010009739) #23	ZBTB2 (ENSBMSG00010009731) #24	RMND1 (ENSBMSG00010009721) #25	ARMT1 (ENSBMSG00010009705) #26	CCDC170 (ENSBMSG00010009670) #27	ESR1 (ENSBMSG00010009630) #28	ENSBMSG00010009590 #32	ENSBMSG00010009558 #32	ENSBMSG00010009535 #31	ENSBMSG00010009099 #32	MYCT1 (ENSBMSG00010008945) #33	VIP (ENSBMSG00010008935) #34	FBXO5 (ENSBMSG00010008916) #35	MTRF1L (ENSBMSG00010008898) #36	RGS17 (ENSBMSG00010008878) #37
Pecora	ANCESTRAL SPECIES	19	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Percora_a	ANCESTRAL SPECIES	21	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.g #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c.h #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Bovidae	ANCESTRAL SPECIES	21	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c.g #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c.h #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Bovinae	ANCESTRAL SPECIES	35	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a.b.a #18	ENSGT00950000185143.a	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b.f #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Bos	ANCESTRAL SPECIES	19	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00940000157437.bb.a.a	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a.b.a #18	ENSGT00390000004348 #20	ENSGT00950000182985.b.a	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a.a #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b.e #18	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a #19	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000174968	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37
Bos_b	ANCESTRAL SPECIES	42										ENSGT00390000004348 #20	ENSGT00950000182985.b.a	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a.a #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b.e.a #18	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a #19	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236
Cow	MODERN SPECIES	28	ENSBTAG00000050728	NUP43 (ENSBTAG00000010196) #15	PCMT1 (ENSBTAG00000010204) #16	LRP11 (ENSBTAG00000032007)	ULBP21 (ENSBTAG00000047902) #18	ENSBTAG00000038891 #18	ENSBTAG00000052230	ULBP17 (ENSBTAG00000024751) #18	ENSBTAG00000036061 #18	ENSBTAG00000050143 #18	RAET1G (ENSBTAG00000039329) #18	PPP1R14C (ENSBTAG00000026586)	IYD (ENSBTAG00000015935) #20	ENSBTAG00000048114 #19	PLEKHG1 (ENSBTAG00000009679) #21	MTHFD1L (ENSBTAG00000009846) #22	AKAP12 (ENSBTAG00000014788) #23	ZBTB2 (ENSBTAG00000014790) #24	RMND1 (ENSBTAG00000013224) #25	ARMT1 (ENSBTAG00000004098) #26	ENSBTAG00000006398	CCDC170 (ENSBTAG00000004099) #27	ESR1 (ENSBTAG00000007159) #28	SYNE1 (ENSBTAG00000009362) #32	ENSBTAG00000052949 #32	ENSBTAG00000054309 #31	ENSBTAG00000052173 #32	ENSBTAG00000054597 #32	MYCT1 (ENSBTAG00000043975) #33	VIP (ENSBTAG00000013400) #34	FBXO5 (ENSBTAG00000021193) #35
Hybrid Bos Indicus	MODERN SPECIES	28	ENSBIXG00005005447 #19	ENSBIXG00005021403 #18	ENSBIXG00005003606 #18	ENSBIXG00005003601 #18	ENSBIXG00005021328 #18	ENSBIXG00005021313 #18	ENSBIXG00005021299 #18	ENSBIXG00005003594 #18	ENSBIXG00005021260 #19	ENSBIXG00005021149 #18	ENSBIXG00005021137 #18	PPP1R14C (ENSBIXG00005021119)	IYD (ENSBIXG00005021090) #20	ENSBIXG00005003560 #19	PLEKHG1 (ENSBIXG00005021022) #21	MTHFD1L (ENSBIXG00005020926) #22	AKAP12 (ENSBIXG00005020718) #23	ZBTB2 (ENSBIXG00005020697) #24	RMND1 (ENSBIXG00005020664) #25	ARMT1 (ENSBIXG00005020618) #26	CCDC170 (ENSBIXG00005003477) #27	ENSBIXG00005020541	ESR1 (ENSBIXG00005020485) #28	SYNE1 (ENSBIXG00005007834) #32	MYCT1 (ENSBIXG00005019369) #33	VIP (ENSBIXG00005019364) #34	FBXO5 (ENSBIXG00005019333) #35	MTRF1L (ENSBIXG00005005667) #36	OPRM1 (ENSBIXG00005019182)	IPCEF1 (ENSBIXG00005019118)	CNKSR3 (ENSBIXG00005019050)
Bos_a	ANCESTRAL SPECIES	54									ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.a.a #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT01100000263517.b.d.m.a.a.a.a.c.h.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.b.f.a #18	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Wild yak	MODERN SPECIES	414														ENSBMUG00000022703 #19	PLEKHG1 (ENSBMUG00000022740) #21	MTHFD1L (ENSBMUG00000022849) #22	AKAP12 (ENSBMUG00000022883) #23	ZBTB2 (ENSBMUG00000022889) #24	RMND1 (ENSBMUG00000022921) #25	ARMT1 (ENSBMUG00000022940) #26	CCDC170 (ENSBMUG00000022950) #27	ENSBMUG00000022966 #28	SYNE1 (ENSBMUG00000023407) #32	MYCT1 (ENSBMUG00000023638) #33	VIP (ENSBMUG00000023648) #34	FBXO5 (ENSBMUG00000023656) #35	MTRF1L (ENSBMUG00000023676) #36	RGS17 (ENSBMUG00000023688) #37	ENSBMUG00000023702	OPRM1 (ENSBMUG00000023738)	IPCEF1 (ENSBMUG00000023775)
Domestic yak	MODERN SPECIES	1										ENSBGRG00000007278	ENSBGRG00000007259	ENSBGRG00000007234 #19	IYD (ENSBGRG00000007032) #20	ENSBGRG00000006995	PLEKHG1 (ENSBGRG00000006883) #21	MTHFD1L (ENSBGRG00000006438) #22	AKAP12 (ENSBGRG00000006364) #23	ZBTB2 (ENSBGRG00000006306) #24	RMND1 (ENSBGRG00000006257) #25	ARMT1 (ENSBGRG00000006221) #26	CCDC170 (ENSBGRG00000006106) #27	ESR1 (ENSBGRG00000006011) #28	ENSBGRG00000005788 #32	ENSBGRG00000005717 #32	ENSBGRG00000005659	ENSBGRG00000005643 #31	ENSBGRG00000004829 #32	MYCT1 (ENSBGRG00000004741) #33	VIP (ENSBGRG00000004685) #34	FBXO5 (ENSBGRG00000004593) #35	MTRF1L (ENSBGRG00000004480) #36
American bison	MODERN SPECIES	3071											ENSBBBG00000012889 #19	ENSBBBG00000012884 #18	ENSBBBG00000012881 #18	IYD (ENSBBBG00000012867) #20	PLEKHG1 (ENSBBBG00000001747) #21	MTHFD1L (ENSBBBG00000002508) #22	AKAP12 (ENSBBBG00000008737) #23	ZBTB2 (ENSBBBG00000012799) #24	RMND1 (ENSBBBG00000012797) #25	ARMT1 (ENSBBBG00000012777) #26	CCDC170 (ENSBBBG00000012772) #27	ENSBBBG00000008109 #28	SYNE1 (ENSBBBG00000012707) #32	MYCT1 (ENSBBBG00000012062) #33	VIP (ENSBBBG00000012054) #34	FBXO5 (ENSBBBG00000012046) #35	MTRF1L (ENSBBBG00000012041) #36	RGS17 (ENSBBBG00000002257) #37	OPRM1 (ENSBBBG00000012004)	IPCEF1 (ENSBBBG00000011980)	CNKSR3 (ENSBBBG00000011968)
Caprinae	ANCESTRAL SPECIES		ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.lb.b.c.b.a #18	ENSGT00950000185143.a	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.b.d #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.mb.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Goat	MODERN SPECIES	28	ENSCHIG00000006873 #18	ENSCHIG00000018340 #18	ENSCHIG00000014062 #18	ENSCHIG00000001983 #19	ENSCHIG00000006005 #18	ENSCHIG00000018826 #18	ENSCHIG00000009129 #19	ENSCHIG00000008160 #18	ENSCHIG00000019400	ENSCHIG00000009062	ENSCHIG00000025529 #18	ENSCHIG00000023203 #18	PPP1R14C (ENSCHIG00000026590)	IYD (ENSCHIG00000026899) #20	PLEKHG1 (ENSCHIG00000011933) #21	MTHFD1L (ENSCHIG00000026337) #22	AKAP12 (ENSCHIG00000013493) #23	ZBTB2 (ENSCHIG00000023404) #24	RMND1 (ENSCHIG00000013571) #25	ARMT1 (ENSCHIG00000024403) #26	CCDC170 (ENSCHIG00000015746) #27	ESR1 (ENSCHIG00000014058) #28	ENSCHIG00000022719	ENSCHIG00000017428	SYNE1 (ENSCHIG00000016453) #32	MYCT1 (ENSCHIG00000027092) #33	VIP (ENSCHIG00000015334) #34	ENSCHIG00000018470	FBXO5 (ENSCHIG00000026682) #35	MTRF1L (ENSCHIG00000007830) #36	RGS17 (ENSCHIG00000018427) #37
Rambouillet Sheep	MODERN SPECIES	24	GINM1 (ENSOARG00020019919) #10	KATNA1 (ENSOARG00020019961) #11	LATS1 (ENSOARG00020020046) #13	NUP43 (ENSOARG00020020162) #15	PCMT1 (ENSOARG00020020247) #16	LRP11 (ENSOARG00020020445)	ENSOARG00020020509 #18	ENSOARG00020020751	ENSOARG00020020776 #18	ENSOARG00020020849	ENSOARG00020020885 #18	ENSOARG00020020931 #18	PPP1R14C (ENSOARG00020020977)	IYD (ENSOARG00020021015) #20	PLEKHG1 (ENSOARG00020021072) #21	MTHFD1L (ENSOARG00020021229) #22	AKAP12 (ENSOARG00020021809) #23	ZBTB2 (ENSOARG00020021872) #24	RMND1 (ENSOARG00020021897) #25	ARMT1 (ENSOARG00020021948) #26	CCDC170 (ENSOARG00020021972) #27	ESR1 (ENSOARG00020022045) #28	SYNE1 (ENSOARG00020022335) #32	MYCT1 (ENSOARG00020024842) #33	VIP (ENSOARG00020024851) #34	FBXO5 (ENSOARG00020024869) #35	MTRF1L (ENSOARG00020024904) #36	RGS17 (ENSOARG00020024922) #37	ENSOARG00020024931	OPRM1 (ENSOARG00020024943)	IPCEF1 (ENSOARG00020024992)
Siberian musk deer	MODERN SPECIES	60	KATNA1 (ENSMMSG00000003646) #11	LATS1 (ENSMMSG00000003677) #13	NUP43 (ENSMMSG00000003704) #15	PCMT1 (ENSMMSG00000003758) #16	LRP11 (ENSMMSG00000003820)	ENSMMSG00000003839 #19	ENSMMSG00000003858 #18	ENSMMSG00000003875 #18	ENSMMSG00000003889 #18	ENSMMSG00000003897 #19	ENSMMSG00000003903 #18	PPP1R14C (ENSMMSG00000003908)	IYD (ENSMMSG00000003954) #20	PLEKHG1 (ENSMMSG00000004000) #21	ENSMMSG00000004073	MTHFD1L (ENSMMSG00000004101) #22	AKAP12 (ENSMMSG00000004153) #23	ZBTB2 (ENSMMSG00000004198) #24	RMND1 (ENSMMSG00000004210) #25	ARMT1 (ENSMMSG00000004226) #26	CCDC170 (ENSMMSG00000004253) #27	ENSMMSG00000004280	ESR1 (ENSMMSG00000004298) #28	SYNE1 (ENSMMSG00000004396) #32	MYCT1 (ENSMMSG00000004698) #33	VIP (ENSMMSG00000004730) #34	FBXO5 (ENSMMSG00000004752) #35	MTRF1L (ENSMMSG00000004788) #36	RGS17 (ENSMMSG00000004836) #37	OPRM1 (ENSMMSG00000004891)	IPCEF1 (ENSMMSG00000005110)
Yarkand deer	MODERN SPECIES	18	LATS1 (ENSCHYG00000023456) #13	ENSCHYG00000023530	NUP43 (ENSCHYG00000023555) #15	PCMT1 (ENSCHYG00000023657) #16	ENSCHYG00000023963	ENSCHYG00000023991	ENSCHYG00000024023 #19	ENSCHYG00000024059 #18	ENSCHYG00000024218 #18	ENSCHYG00000024396 #18	ENSCHYG00000024426	PPP1R14C (ENSCHYG00000024443)	IYD (ENSCHYG00000024472) #20	PLEKHG1 (ENSCHYG00000024587) #21	ENSCHYG00000024716	MTHFD1L (ENSCHYG00000024773) #22	AKAP12 (ENSCHYG00000025364) #23	ZBTB2 (ENSCHYG00000025392) #24	RMND1 (ENSCHYG00000025421) #25	ARMT1 (ENSCHYG00000025462) #26	CCDC170 (ENSCHYG00000025505) #27	ESR1 (ENSCHYG00000025561) #28	SYNE1 (ENSCHYG00000025778) #32	MYCT1 (ENSCHYG00000026747) #33	VIP (ENSCHYG00000026757) #34	FBXO5 (ENSCHYG00000026768) #35	ENSCHYG00000026781 #36	RGS17 (ENSCHYG00000026801) #37	ENSCHYG00000026812	OPRM1 (ENSCHYG00000026823)	IPCEF1 (ENSCHYG00000026833)
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Ursidae	ANCESTRAL SPECIES	22	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Ursus	ANCESTRAL SPECIES	117	ENSGT00950000182906.b.a	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00940000165162 #31	ENSGT00940000154481.a.b.ac.b #32	ENSGT00940000154481.a.b.ac.a #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34
American black bear	MODERN SPECIES	560															PLEKHG1 (ENSUAMG00000014983) #21	MTHFD1L (ENSUAMG00000014436) #22
Polar bear	MODERN SPECIES	190	SASH1 (ENSUMAG00000002837)	UST (ENSUMAG00000002801)	TAB2 (ENSUMAG00000002788)	ENSUMAG00000002782 #7	PPIL4 (ENSUMAG00000002774) #9	GINM1 (ENSUMAG00000002770) #10	KATNA1 (ENSUMAG00000002763) #11	ENSUMAG00000002760 #13	ENSUMAG00000002756 #13	NUP43 (ENSUMAG00000002752) #15	PCMT1 (ENSUMAG00000002747) #16	ENSUMAG00000002745	ENSUMAG00000002741 #18	IYD (ENSUMAG00000002727) #20	PLEKHG1 (ENSUMAG00000002715) #21	MTHFD1L (ENSUMAG00000002326) #22	ENSUMAG00000002250 #23	ZBTB2 (ENSUMAG00000002240) #24	RMND1 (ENSUMAG00000002220) #25	ENSUMAG00000002214 #26	ENSUMAG00000002206 #26	CCDC170 (ENSUMAG00000002190) #27	ENSUMAG00000002176 #28	ENSUMAG00000001138 #32	ENSUMAG00000000885 #31	ENSUMAG00000000085 #32	ENSUMAG00000024192 #32	MYCT1 (ENSUMAG00000024191) #33	VIP (ENSUMAG00000024190) #34
Giant Panda	MODERN SPECIES	1	TAB2 (ENSAMEG00000018285)	ENSAMEG00000018283 #7	PPIL4 (ENSAMEG00000018278) #9	GINM1 (ENSAMEG00000018277) #10	KATNA1 (ENSAMEG00000018275) #11	LATS1 (ENSAMEG00000018273) #13	ENSAMEG00000029494 #14	NUP43 (ENSAMEG00000018267) #15	PCMT1 (ENSAMEG00000018264) #16	LRP11 (ENSAMEG00000028001)	ENSAMEG00000018260 #18	ENSAMEG00000027911	ENSAMEG00000003274 #20	PLEKHG1 (ENSAMEG00000003289) #21	ENSAMEG00000027298	MTHFD1L (ENSAMEG00000003323) #22	AKAP12 (ENSAMEG00000011101) #23	ZBTB2 (ENSAMEG00000023899) #24	RMND1 (ENSAMEG00000011087) #25	ARMT1 (ENSAMEG00000024514) #26	CCDC170 (ENSAMEG00000011074) #27	ESR1 (ENSAMEG00000011072) #28	SYNE1 (ENSAMEG00000010887) #32	MYCT1 (ENSAMEG00000025534) #33	VIP (ENSAMEG00000010871) #34	FBXO5 (ENSAMEG00000030250) #35	MTRF1L (ENSAMEG00000001252) #36	RGS17 (ENSAMEG00000001249) #37	OPRM1 (ENSAMEG00000010364)	IPCEF1 (ENSAMEG00000010361)	CNKSR3 (ENSAMEG00000007564)
Mustelinae	ANCESTRAL SPECIES	26	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.a.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c.k #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.a.a.a #18	ENSGT01030000235909	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Ferret	MODERN SPECIES	201	TSPYL4 (ENSMPUG00000019131)	TSPYL1 (ENSMPUG00000019136)	DSE (ENSMPUG00000010332)	CALHM5 (ENSMPUG00000010338)	ENSMPUG00000010344 #18	ENSMPUG00000010351 #19	ENSMPUG00000010367	ENSMPUG00000010372 #18	ENSMPUG00000010376	ENSMPUG00000010380 #18	ENSMPUG00000010393	ENSMPUG00000019141	IYD (ENSMPUG00000010397) #20	PLEKHG1 (ENSMPUG00000010404) #21	ENSMPUG00000010410	MTHFD1L (ENSMPUG00000010414) #22	ENSMPUG00000010428	ENSMPUG00000010433	AKAP12 (ENSMPUG00000010439) #23	ZBTB2 (ENSMPUG00000010444) #24	RMND1 (ENSMPUG00000010450) #25	ARMT1 (ENSMPUG00000010459) #26	CCDC170 (ENSMPUG00000010462) #27	ESR1 (ENSMPUG00000010481) #28	SYNE1 (ENSMPUG00000010485) #32	MYCT1 (ENSMPUG00000010542) #33	VIP (ENSMPUG00000010545) #34	FBXO5 (ENSMPUG00000010553) #35	MTRF1L (ENSMPUG00000010577) #36	RGS17 (ENSMPUG00000010584) #37
American mink	MODERN SPECIES	4	TSPYL4 (ENSNVIG00000006466)	DSE (ENSNVIG00000006494)	ENSNVIG00000006528	CALHM5 (ENSNVIG00000006537)	ENSNVIG00000006541 #18	ENSNVIG00000006546 #18	ENSNVIG00000006567 #19	ENSNVIG00000006590 #19	ENSNVIG00000006632 #18	ENSNVIG00000006638 #18	ENSNVIG00000006654 #18	PPP1R14C (ENSNVIG00000006672)	IYD1 (ENSNVIG00000006683) #20	ENSNVIG00000006714	PLEKHG1 (ENSNVIG00000006728) #21	MTHFD1L (ENSNVIG00000006768) #22	AKAP12 (ENSNVIG00000006843) #23	ZBTB2 (ENSNVIG00000006849) #24	RMND1 (ENSNVIG00000006864) #25	ARMT1 (ENSNVIG00000006911) #26	CCDC170 (ENSNVIG00000006940) #27	ESR1 (ENSNVIG00000006962) #28	SYNE1 (ENSNVIG00000007105) #32	MYCT1 (ENSNVIG00000008075) #33	VIP (ENSNVIG00000008088) #34	FBXO5 (ENSNVIG00000008114) #35	MTRF1L (ENSNVIG00000008138) #36	RGS17 (ENSNVIG00000008185) #37	OPRM1 (ENSNVIG00000008214)	IPCEF1 (ENSNVIG00000008312)	CNKSR3 (ENSNVIG00000008386)
Canidae	ANCESTRAL SPECIES	34	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00950000182802.B.a.a.a.b.a.a	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Red fox	DUPLICATION
Red fox	MODERN SPECIES	26	PPIL4 (ENSVVUG00000005119) #9	ENSVVUG00000005122	GINM1 (ENSVVUG00000005128) #10	KATNA1 (ENSVVUG00000005135) #11	LATS1 (ENSVVUG00000005155) #13	NUP43 (ENSVVUG00000005168) #15	PCMT1 (ENSVVUG00000005178) #16	ENSVVUG00000005185	ENSVVUG00000005187 #19	ENSVVUG00000005191	ENSVVUG00000005195 #18	PPP1R14C (ENSVVUG00000005202)	IYD (ENSVVUG00000005224) #20	PLEKHG1 (ENSVVUG00000005233) #21	ENSVVUG00000005287 #22	ENSVVUG00000005367 #22	AKAP12 (ENSVVUG00000006099) #23	ENSVVUG00000006108	ZBTB2 (ENSVVUG00000006110) #24	RMND1 (ENSVVUG00000006114) #25	ARMT1 (ENSVVUG00000006134) #26	CCDC170 (ENSVVUG00000006168) #27	ESR1 (ENSVVUG00000006190) #28	ENSVVUG00000006396 #32	ENSVVUG00000006984 #32	MYCT1 (ENSVVUG00000007392) #33	VIP (ENSVVUG00000007395) #34	ENSVVUG00000007408	FBXO5 (ENSVVUG00000007414) #35	RGS17 (ENSVVUG00000007424) #37	OPRM1 (ENSVVUG00000007466)
Red fox	MODERN SPECIES	26	ENSVVUG00000005116 #7	PPIL4 (ENSVVUG00000005119) #9	ENSVVUG00000005122	GINM1 (ENSVVUG00000005128) #10	KATNA1 (ENSVVUG00000005135) #11	LATS1 (ENSVVUG00000005155) #13	NUP43 (ENSVVUG00000005168) #15	PCMT1 (ENSVVUG00000005178) #16	ENSVVUG00000005185	ENSVVUG00000005187 #19	ENSVVUG00000005191	ENSVVUG00000005195 #18	PPP1R14C (ENSVVUG00000005202)	IYD (ENSVVUG00000005224) #20	PLEKHG1 (ENSVVUG00000005233) #21	ENSVVUG00000005287 #22	ENSVVUG00000005367 #22	AKAP12 (ENSVVUG00000006099) #23	ENSVVUG00000006108	ZBTB2 (ENSVVUG00000006110) #24	RMND1 (ENSVVUG00000006114) #25	ARMT1 (ENSVVUG00000006134) #26	CCDC170 (ENSVVUG00000006168) #27	ESR1 (ENSVVUG00000006190) #28	ENSVVUG00000006396 #32	ENSVVUG00000006984 #32	MYCT1 (ENSVVUG00000007392) #33	VIP (ENSVVUG00000007395) #34	ENSVVUG00000007408	FBXO5 (ENSVVUG00000007414) #35	RGS17 (ENSVVUG00000007424) #37
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT00390000015489.q.a.f.a	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00950000182802.B.a.a.a.b.a.a	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Dog	MODERN SPECIES		PPIL4 (ENSCAFG00845018247) #9	GINM1 (ENSCAFG00845018387) #10	KATNA1 (ENSCAFG00845018545) #11	LATS1 (ENSCAFG00845018656) #13	ENSCAFG00845018728 #14	NUP43 (ENSCAFG00845018774) #15	PCMT1 (ENSCAFG00845018925) #16	LRP11 (ENSCAFG00845019246)	ENSCAFG00845019312 #19	ENSCAFG00845019515	ENSCAFG00845019534 #18	ENSCAFG00845019584	PPP1R14C (ENSCAFG00845019656)	IYD (ENSCAFG00845019736) #20	PLEKHG1 (ENSCAFG00845019814) #21	MTHFD1L (ENSCAFG00845020116) #22	AKAP12 (ENSCAFG00845021174) #23	ZBTB2 (ENSCAFG00845021289) #24	RMND1 (ENSCAFG00845000007) #25	ARMT1 (ENSCAFG00845000014) #26	CCDC170 (ENSCAFG00845000020) #27	ESR1 (ENSCAFG00845000028) #28	SYNE1 (ENSCAFG00845000043) #32	ENSCAFG00845000071	MYCT1 (ENSCAFG00845000077) #33	VIP (ENSCAFG00845000085) #34	ENSCAFG00845000096	FBXO5 (ENSCAFG00845000104) #35	MTRF1L (ENSCAFG00845000120) #36	RGS17 (ENSCAFG00845000141) #37	OPRM1 (ENSCAFG00845000160)
Dingo	DUPLICATION
Dingo	MODERN SPECIES	125	UST (ENSCAFG00020013516)	TAB2 (ENSCAFG00020013536)	ENSCAFG00020013539 #7	PPIL4 (ENSCAFG00020013550) #9	GINM1 (ENSCAFG00020013825) #10	KATNA1 (ENSCAFG00020013829) #11	LATS1 (ENSCAFG00020013895) #13	NUP43 (ENSCAFG00020013901) #15	PCMT1 (ENSCAFG00020013908) #16	LRP11 (ENSCAFG00020013981)	ENSCAFG00020014007 #19	ENSCAFG00020014013	PPP1R14C (ENSCAFG00020014021)	IYD (ENSCAFG00020014043) #20	PLEKHG1 (ENSCAFG00020014055) #21	ENSCAFG00020014068 #22	ENSCAFG00020014133 #22	ENSCAFG00020014694	AKAP12 (ENSCAFG00020014695) #23	ZBTB2 (ENSCAFG00020014696) #24	RMND1 (ENSCAFG00020014697) #25	ENSCAFG00020014700 #26	ENSCAFG00020014702 #26	CCDC170 (ENSCAFG00020014704) #27	ESR1 (ENSCAFG00020014707) #28	ENSCAFG00020014804 #32	ENSCAFG00020014881 #32	MYCT1 (ENSCAFG00020014923) #33	VIP (ENSCAFG00020014925) #34	FBXO5 (ENSCAFG00020014935) #35	MTRF1L (ENSCAFG00020014937) #36
Dingo	MODERN SPECIES	125	TAB2 (ENSCAFG00020013536)	ENSCAFG00020013539 #7	PPIL4 (ENSCAFG00020013550) #9	GINM1 (ENSCAFG00020013825) #10	KATNA1 (ENSCAFG00020013829) #11	LATS1 (ENSCAFG00020013895) #13	NUP43 (ENSCAFG00020013901) #15	PCMT1 (ENSCAFG00020013908) #16	LRP11 (ENSCAFG00020013981)	ENSCAFG00020014007 #19	ENSCAFG00020014013	PPP1R14C (ENSCAFG00020014021)	IYD (ENSCAFG00020014043) #20	PLEKHG1 (ENSCAFG00020014055) #21	ENSCAFG00020014068 #22	ENSCAFG00020014133 #22	ENSCAFG00020014694	AKAP12 (ENSCAFG00020014695) #23	ZBTB2 (ENSCAFG00020014696) #24	RMND1 (ENSCAFG00020014697) #25	ENSCAFG00020014700 #26	ENSCAFG00020014702 #26	CCDC170 (ENSCAFG00020014704) #27	ESR1 (ENSCAFG00020014707) #28	ENSCAFG00020014804 #32	ENSCAFG00020014881 #32	MYCT1 (ENSCAFG00020014923) #33	VIP (ENSCAFG00020014925) #34	FBXO5 (ENSCAFG00020014935) #35	MTRF1L (ENSCAFG00020014937) #36	RGS17 (ENSCAFG00020014939) #37
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT01040000242984	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Panthera	ANCESTRAL SPECIES	7	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT01040000242984	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT01040000242984	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
lion	MODERN SPECIES	5	ZC3H12D (ENSPLOG00000020914) #7	PPIL4 (ENSPLOG00000020968) #9	GINM1 (ENSPLOG00000021016) #10	KATNA1 (ENSPLOG00000021067) #11	LATS1 (ENSPLOG00000021118) #13	ENSPLOG00000021149 #14	NUP43 (ENSPLOG00000021172) #15	PCMT1 (ENSPLOG00000021244) #16	LRP11 (ENSPLOG00000021323)	ENSPLOG00000021375 #19	PPP1R14C (ENSPLOG00000021411)	ENSPLOG00000021433	IYD (ENSPLOG00000021448) #20	ENSPLOG00000021471	PLEKHG1 (ENSPLOG00000021507) #21	MTHFD1L (ENSPLOG00000021591) #22	AKAP12 (ENSPLOG00000000322) #23	ZBTB2 (ENSPLOG00000000341) #24	RMND1 (ENSPLOG00000000352) #25	ARMT1 (ENSPLOG00000000374) #26	CCDC170 (ENSPLOG00000000397) #27	ESR1 (ENSPLOG00000000444) #28	SYNE1 (ENSPLOG00000001040) #32	MYCT1 (ENSPLOG00000002023) #33	VIP (ENSPLOG00000002035) #34	ENSPLOG00000002097 #36	RGS17 (ENSPLOG00000002174) #37	OPRM1 (ENSPLOG00000002202)	IPCEF1 (ENSPLOG00000002238)	CNKSR3 (ENSPLOG00000002266)	SCAF8 (ENSPLOG00000002327)
leopard	MODERN SPECIES	140												ENSPPRG00000008471	PPP1R14C (ENSPPRG00000008482)	IYD (ENSPPRG00000008491) #20	PLEKHG1 (ENSPPRG00000008781) #21	MTHFD1L (ENSPPRG00000009075) #22	AKAP12 (ENSPPRG00000009132) #23	ZBTB2 (ENSPPRG00000009222) #24	RMND1 (ENSPPRG00000009267) #25	ARMT1 (ENSPPRG00000009551) #26	CCDC170 (ENSPPRG00000009606) #27	ESR1 (ENSPPRG00000009745) #28	ENSPPRG00000009951 #32	ENSPPRG00000010874 #32	MYCT1 (ENSPPRG00000010948) #33	VIP (ENSPPRG00000010990) #34	FBXO5 (ENSPPRG00000011003) #35	MTRF1L (ENSPPRG00000011039) #36	RGS17 (ENSPPRG00000011102) #37
Tiger	MODERN SPECIES	551																MTHFD1L (ENSPTIG00000008995) #22	AKAP12 (ENSPTIG00000011299) #23	ZBTB2 (ENSPTIG00000012254) #24	RMND1 (ENSPTIG00000012455) #25	ARMT1 (ENSPTIG00000015245) #26	CCDC170 (ENSPTIG00000015972) #27	ENSPTIG00000006582 #28	ENSPTIG00000017043	ENSPTIG00000017428 #32	ENSPTIG00000003459 #32	MYCT1 (ENSPTIG00000019093) #33	VIP (ENSPTIG00000019361) #34	FBXO5 (ENSPTIG00000019781) #35	MTRF1L (ENSPTIG00000020019) #36	RGS17 (ENSPTIG00000004990) #37	OPRM1 (ENSPTIG00000006702)
Cat	MODERN SPECIES	236	GINM1 (ENSFCAG00000011292) #10	KATNA1 (ENSFCAG00000011293) #11	LATS1 (ENSFCAG00000023857) #13	ENSFCAG00000041389 #14	NUP43 (ENSFCAG00000031791) #15	PCMT1 (ENSFCAG00000027352) #16	LRP11 (ENSFCAG00000045912)	ENSFCAG00000005672 #19	ENSFCAG00000049506 #18	ENSFCAG00000047793 #18	PPP1R14C (ENSFCAG00000035894)	ENSFCAG00000023771	IYD (ENSFCAG00000003732) #20	ENSFCAG00000052538	PLEKHG1 (ENSFCAG00000029811) #21	MTHFD1L (ENSFCAG00000003673) #22	AKAP12 (ENSFCAG00000041794) #23	ZBTB2 (ENSFCAG00000040972) #24	RMND1 (ENSFCAG00000010205) #25	ARMT1 (ENSFCAG00000010206) #26	CCDC170 (ENSFCAG00000010207) #27	ESR1 (ENSFCAG00000031492) #28	SYNE1 (ENSFCAG00000000049) #32	MYCT1 (ENSFCAG00000028294) #33	VIP (ENSFCAG00000002179) #34	FBXO5 (ENSFCAG00000030126) #35	MTRF1L (ENSFCAG00000037854) #36	RGS17 (ENSFCAG00000037833) #37	OPRM1 (ENSFCAG00000005359)	IPCEF1 (ENSFCAG00000024018)	CNKSR3 (ENSFCAG00000005430)
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Equus	ANCESTRAL SPECIES	46	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.c.p.b #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.bb.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c.o #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.cb #18	ENSGT01100000263517.b.d.m.a.a.a.a.c.p.a #19	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.bb.a.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.bb.a.a #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT01090000263352	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b
Donkey	MODERN SPECIES	20	ENSEASG00005032238	ENSEASG00005032265	ENSEASG00005027781	ENSEASG00005027838	ENSEASG00005027669	ENSEASG00005028916	ENSEASG00005023074	PPIF (ENSEASG00005032195)	ZMIZ1 (ENSEASG00005023063)	ENSEASG00005023056	POLR3A (ENSEASG00005023053)	DLG5 (ENSEASG00005023049)	ENSEASG00005023024	ENSEASG00005016792 #20	ENSEASG00005016807 #21	MTHFD1L (ENSEASG00005017019) #22	AKAP12 (ENSEASG00005018740) #23	ZBTB2 (ENSEASG00005018742) #24	RMND1 (ENSEASG00005018744) #25	ARMT1 (ENSEASG00005031339) #26	CCDC170 (ENSEASG00005018748) #27	ESR1 (ENSEASG00005018755) #28	ENSEASG00005018807 #32	ENSEASG00005018835 #32	MYCT1 (ENSEASG00005031624) #33	ENSEASG00005037232	VIP (ENSEASG00005018861) #34	FBXO5 (ENSEASG00005018864) #35	MTRF1L (ENSEASG00005018866) #36	RGS17 (ENSEASG00005018868) #37	OPRM1 (ENSEASG00005018870)
Horse	MODERN SPECIES	24	NUP43 (ENSECAG00000018413) #15	ENSECAG00000054669	ENSECAG00000054538	PCMT1 (ENSECAG00000005292) #16	LRP11 (ENSECAG00000026818)	ENSECAG00000037075 #19	ENSECAG00000033237 #18	ENSECAG00000047371 #19	ENSECAG00000036563 #18	ENSECAG00000003090 #19	ENSECAG00000059096 #18	ENSECAG00000037408 #18	ENSECAG00000034476	IYD (ENSECAG00000018766) #20	PLEKHG1 (ENSECAG00000007095) #21	MTHFD1L (ENSECAG00000001166) #22	AKAP12 (ENSECAG00000022166) #23	ZBTB2 (ENSECAG00000021762) #24	RMND1 (ENSECAG00000018207) #25	ARMT1 (ENSECAG00000015349) #26	CCDC170 (ENSECAG00000013130) #27	ESR1 (ENSECAG00000022441) #28	SYNE1 (ENSECAG00000017353) #32	ENSECAG00000057509 #32	MYCT1 (ENSECAG00000015960) #33	ENSECAG00000059138	VIP (ENSECAG00000013586) #34	FBXO5 (ENSECAG00000011630) #35	MTRF1L (ENSECAG00000002759) #36	RGS17 (ENSECAG00000022231) #37	OPRM1 (ENSECAG00000013458)
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00900000143690 #14	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d.b #18	ENSGT01100000263517.b.d.m.a.a.a.a.c #19	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.bc #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Greater horseshoe bat	MODERN SPECIES	21	LATS1 (ENSRFEG00010014763) #13	ENSRFEG00010014829 #14	NUP43 (ENSRFEG00010014897) #15	PCMT1 (ENSRFEG00010015151) #16	LRP11 (ENSRFEG00010015632)	ENSRFEG00010015741 #18	ENSRFEG00010015765 #19	ENSRFEG00010015855 #19	ENSRFEG00010015921 #18	ENSRFEG00010016156 #18	PPP1R14C (ENSRFEG00010016410)	IYD (ENSRFEG00010016480) #20	ENSRFEG00010016530	ENSRFEG00010016588	PLEKHG1 (ENSRFEG00010016656) #21	MTHFD1L (ENSRFEG00010016718) #22	ENSRFEG00010017181	AKAP12 (ENSRFEG00010017239) #23	ZBTB2 (ENSRFEG00010017257) #24	RMND1 (ENSRFEG00010017312) #25	ARMT1 (ENSRFEG00010017409) #26	CCDC170 (ENSRFEG00010017486) #27	ESR1 (ENSRFEG00010017671) #28	SYNE1 (ENSRFEG00010017835) #32	MYCT1 (ENSRFEG00010018323) #33	VIP (ENSRFEG00010018363) #34	ENSRFEG00010018375	ENSRFEG00010018397	FBXO5 (ENSRFEG00010018406) #35	MTRF1L (ENSRFEG00010018467) #36	RGS17 (ENSRFEG00010018529) #37
Microbat	MODERN SPECIES	1428													PPP1R14C (ENSMLUG00000023245)	IYD (ENSMLUG00000008377) #20	PLEKHG1 (ENSMLUG00000016927) #21	MTHFD1L (ENSMLUG00000005296) #22
Megabat	MODERN SPECIES	205															PLEKHG1 (ENSPVAG00000005309) #21	MTHFD1L (ENSPVAG00000005315) #22
Atlantogenata	ANCESTRAL SPECIES	51	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Afrotheria	ANCESTRAL SPECIES	55	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.a.a ##26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Afrotheria_a	ANCESTRAL SPECIES	51	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT01100000263517.b.d.m.a.a.a.a.d #18	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.a.a ##26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Elephant	MODERN SPECIES	1	SASH1 (ENSLAFG00000016939)	UST (ENSLAFG00000010257)	TAB2 (ENSLAFG00000028106)	ENSLAFG00000021535 #7	PPIL4 (ENSLAFG00000026804) #9	GINM1 (ENSLAFG00000005075) #10	KATNA1 (ENSLAFG00000005080) #11	LATS1 (ENSLAFG00000005083) #13	NUP43 (ENSLAFG00000012413) #15	PCMT1 (ENSLAFG00000012417) #16	LRP11 (ENSLAFG00000022229)	ENSLAFG00000023055 #18	PPP1R14C (ENSLAFG00000015503)	IYD (ENSLAFG00000004806) #20	PLEKHG1 (ENSLAFG00000002415) #21	MTHFD1L (ENSLAFG00000001635) #22	AKAP12 (ENSLAFG00000006275) #23	ZBTB2 (ENSLAFG00000001805) #24	RMND1 (ENSLAFG00000017983) #25	ARMT1 (ENSLAFG00000007338) ##26	CCDC170 (ENSLAFG00000012458) #27	ENSLAFG00000015250 #28	SYNE1 (ENSLAFG00000008554) #32	MYCT1 (ENSLAFG00000017921) #33	VIP (ENSLAFG00000006337) #34	FBXO5 (ENSLAFG00000001713) #35	MTRF1L (ENSLAFG00000004022) #36	RGS17 (ENSLAFG00000004025) #37	OPRM1 (ENSLAFG00000002597)	ENSLAFG00000031150	IPCEF1 (ENSLAFG00000002600)
Hyrax	MODERN SPECIES	1622																MTHFD1L (ENSPCAG00000012389) #22
Tenrec	MODERN SPECIES	2014																MTHFD1L (ENSETEG00000018194) #22
Xenarthra	ANCESTRAL SPECIES	435															ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.b #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	1163															PLEKHG1 (ENSDNOG00000031797) #21	ENSDNOG00000034617 #22
Armadillo	MODERN SPECIES	1722																ENSDNOG00000012345 #22	AKAP12 (ENSDNOG00000036531) #23	ZBTB2 (ENSDNOG00000047729) #24	ENSDNOG00000030670	RMND1 (ENSDNOG00000001802) #25	ARMT1 (ENSDNOG00000019662) #26	CCDC170 (ENSDNOG00000002029) #27	ESR1 (ENSDNOG00000038208) #28	ENSDNOG00000033660 #32	ENSDNOG00000032987 #31	ENSDNOG00000048000 #32	MYCT1 (ENSDNOG00000035399) #33	VIP (ENSDNOG00000038917) #34	SYCE3 (ENSDNOG00000025822)	KLHDC7B (ENSDNOG00000044024)	ENSDNOG00000031396
Sloth	MODERN SPECIES	1814																MTHFD1L (ENSCHOG00000004678) #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388.h #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00960000188774	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Diprotodontia	ANCESTRAL SPECIES	15	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388.h #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.c #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00960000188774	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
Diprotodontia_a	ANCESTRAL SPECIES	43	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388.h #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023.c #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00960000188774	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a
koala	MODERN SPECIES	25	STXBP5 (ENSPCIG00000004560)	SAMD5 (ENSPCIG00000031367)	SASH1 (ENSPCIG00000004499)	UST (ENSPCIG00000025552)	TAB2 (ENSPCIG00000025555)	PPIL4 (ENSPCIG00000025561) #9	GINM1 (ENSPCIG00000025566) #10	KATNA1 (ENSPCIG00000025567) #11	LATS1 (ENSPCIG00000025569) #13	NUP43 (ENSPCIG00000025570) #15	PCMT1 (ENSPCIG00000025571) #16	LRP11 (ENSPCIG00000025572)	PPP1R14C (ENSPCIG00000025574)	IYD (ENSPCIG00000000102) #20	ENSPCIG00000036024 #21	MTHFD1L (ENSPCIG00000000340) #22	ENSPCIG00000000275 #23	ZBTB2 (ENSPCIG00000000317) #24	RMND1 (ENSPCIG00000015430) #25	ARMT1 (ENSPCIG00000015424) #26	CCDC170 (ENSPCIG00000015420) #27	ENSPCIG00000015401 #28	ENSPCIG00000026913 #32	ENSPCIG00000035321 #32	ENSPCIG00000037024 #31	ENSPCIG00000026821 #32	MYCT1 (ENSPCIG00000026720) #33	ENSPCIG00000026717	ENSPCIG00000008468	FBXO5 (ENSPCIG00000027501) #35	MTRF1L (ENSPCIG00000008136) #36
Common wonbat	MODERN SPECIES	776	SASH1 (ENSVURG00010002129)	UST (ENSVURG00010002084)	TAB2 (ENSVURG00010002055)	ENSVURG00010002031 #7	PPIL4 (ENSVURG00010002015) #9	GINM1 (ENSVURG00010001985) #10	KATNA1 (ENSVURG00010001974) #11	LATS1 (ENSVURG00010001959) #13	NUP43 (ENSVURG00010001929) #15	PCMT1 (ENSVURG00010001919) #16	ENSVURG00010001905	PPP1R14C (ENSVURG00010001870)	IYD (ENSVURG00010001839) #20	PLEKHG1 (ENSVURG00010001804) #21	ENSVURG00010001784	MTHFD1L (ENSVURG00010001735) #22	RMND1 (ENSVURG00010001696) #25	ENSVURG00010001687 #26	ENSVURG00010001665 #26	ESR1 (ENSVURG00010001622) #28	ENSVURG00010001445 #32	ENSVURG00010001331 #32
Wallaby	MODERN SPECIES	2884																MTHFD1L (ENSMEUG00000006017) #22
Tasmanian devil	MODERN SPECIES	3	SASH1 (ENSSHAG00000013003)	UST (ENSSHAG00000032035)	TAB2 (ENSSHAG00000016804)	ENSSHAG00000026461 #7	ENSSHAG00000017000 #7	PPIL4 (ENSSHAG00000017140) #9	GINM1 (ENSSHAG00000020912) #10	KATNA1 (ENSSHAG00000017296) #11	LATS1 (ENSSHAG00000017388) #13	NUP43 (ENSSHAG00000022940) #15	PCMT1 (ENSSHAG00000023309) #16	LRP11 (ENSSHAG00000027360)	PPP1R14C (ENSSHAG00000017832)	IYD (ENSSHAG00000005031) #20	PLEKHG1 (ENSSHAG00000009584) #21	MTHFD1L (ENSSHAG00000010362) #22	ENSSHAG00000012930 #23	RMND1 (ENSSHAG00000020900) #25	ZBTB2 (ENSSHAG00000013043) #24	ARMT1 (ENSSHAG00000026323) #26	ENSSHAG00000013619	CCDC170 (ENSSHAG00000013818) #27	ESR1 (ENSSHAG00000015240) #28	SYNE1 (ENSSHAG00000016595) #32	MYCT1 (ENSSHAG00000028412) #33	ENSSHAG00000031731	FBXO5 (ENSSHAG00000017971) #35	MTRF1L (ENSSHAG00000017997) #36	RGS17 (ENSSHAG00000020953) #37	OPRM1 (ENSSHAG00000005181)	IPCEF1 (ENSSHAG00000025279)
Opossum	MODERN SPECIES	1	UST (ENSMODG00000016836)	TAB2 (ENSMODG00000016831)	ENSMODG00000016829 #7	PPIL4 (ENSMODG00000016825) #9	GINM1 (ENSMODG00000016822) #10	KATNA1 (ENSMODG00000016819) #11	LATS1 (ENSMODG00000016812) #13	ENSMODG00000048057 #15	ENSMODG00000016808 #15	PCMT1 (ENSMODG00000016804) #16	LRP11 (ENSMODG00000016792)	ENSMODG00000016787	IYD (ENSMODG00000016781) #20	ENSMODG00000041763 #21	ENSMODG00000016771 #21	MTHFD1L (ENSMODG00000016765) #22	ENSMODG00000046586 #23	ZBTB2 (ENSMODG00000040530) #24	RMND1 (ENSMODG00000016750) #25	ARMT1 (ENSMODG00000028240) #26	CCDC170 (ENSMODG00000016728) #27	ESR1 (ENSMODG00000016719) #28	SYNE1 (ENSMODG00000016253) #32	MYCT1 (ENSMODG00000008518) #33	VIP (ENSMODG00000008511) #34	FBXO5 (ENSMODG00000008501) #35	MTRF1L (ENSMODG00000008487) #36	RGS17 (ENSMODG00000008463) #37	ENSMODG00000042566	OPRM1 (ENSMODG00000008382)	ENSMODG00000008368
Platypus	MODERN SPECIES	11	SASH1 (ENSOANG00000012316)	UST (ENSOANG00000012315)	TAB2 (ENSOANG00000001062)	ENSOANG00000046774 #7	ENSOANG00000041028 #7	PPIL4 (ENSOANG00000001063) #9	GINM1 (ENSOANG00000001064) #10	KATNA1 (ENSOANG00000001065) #11	LATS1 (ENSOANG00000001067) #13	NUP43 (ENSOANG00000001068) #15	ENSOANG00000001066 #16	ENSOANG00000001069	PPP1R14C (ENSOANG00000043661)	IYD (ENSOANG00000039425) #20	PLEKHG1 (ENSOANG00000003321) #21	MTHFD1L (ENSOANG00000021726) #22	ENSOANG00000039295 #23	ZBTB2 (ENSOANG00000003326) #24	RMND1 (ENSOANG00000003327) #25	ARMT1 (ENSOANG00000048494) #26	CCDC170 (ENSOANG00000003330) #27	ESR1 (ENSOANG00000040685) #28	SYNE1 (ENSOANG00000015557) #32	ENSOANG00000037205	ENSOANG00000011951	RSPH3 (ENSOANG00000021228)	EZR (ENSOANG00000001032)	ENSOANG00000001031	DYNLT1 (ENSOANG00000005209)	TMEM181 (ENSOANG00000010789)	TULP4 (ENSOANG00000041622)
Sauria	ANCESTRAL SPECIES	1	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Archosauria	ANCESTRAL SPECIES	3	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Aves	ANCESTRAL SPECIES	12	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Neognathae	ANCESTRAL SPECIES	2	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000163429.D
Anatidae	ANCESTRAL SPECIES		ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000163429.D
Pink-footed goose	MODERN SPECIES	2	STXBP5 (ENSABRG00000009475)	SAMD5 (ENSABRG00000009448)	SASH1 (ENSABRG00000009323)	UST (ENSABRG00000009254)	TAB2 (ENSABRG00000009224)	ZC3H12D (ENSABRG00000009215) #7	PPIL4 (ENSABRG00000009200) #9	GINM1 (ENSABRG00000009189) #10	LATS1 (ENSABRG00000009169) #13	NUP43 (ENSABRG00000009140) #15	PCMT1 (ENSABRG00000009117) #16	LRP11 (ENSABRG00000009107)	PPP1R14C (ENSABRG00000009084)	IYD (ENSABRG00000009070) #20	PLEKHG1 (ENSABRG00000008984) #21	MTHFD1L (ENSABRG00000008938) #22	AKAP12 (ENSABRG00000008911) #23	ZBTB2 (ENSABRG00000008902) #24	RMND1 (ENSABRG00000008884) #25	ARMT1 (ENSABRG00000008870) #26	CCDC170 (ENSABRG00000008853) #27	ESR1 (ENSABRG00000008623) #28	SYNE1 (ENSABRG00000005369) #32	MYCT1 (ENSABRG00000005084) #33	VIP (ENSABRG00000005071) #34	FBXO5 (ENSABRG00000005041) #35	MTRF1L (ENSABRG00000005018) #36	RGS17 (ENSABRG00000005008) #37	OPRM1 (ENSABRG00000004981)	ENSABRG00000004958	ENSABRG00000004935
Duck	MODERN SPECIES	21	SASH1 (ENSAPLG00000007750)	UST (ENSAPLG00000008044)	TAB2 (ENSAPLG00000008173)	ZC3H12D (ENSAPLG00000008379) #7	PPIL4 (ENSAPLG00000008437) #9	GINM1 (ENSAPLG00000008777) #10	KATNA1 (ENSAPLG00000008891) #11	LATS1 (ENSAPLG00000009385) #13	NUP43 (ENSAPLG00000028569) #15	PCMT1 (ENSAPLG00000009762) #16	LRP11 (ENSAPLG00000009937)	PPP1R14C (ENSAPLG00000009955)	IYD (ENSAPLG00000009957) #20	ENSAPLG00000029816 #21	ENSAPLG00000010066 #21	MTHFD1L (ENSAPLG00000010485) #22	AKAP12 (ENSAPLG00000020224) #23	ZBTB2 (ENSAPLG00000011819) #24	RMND1 (ENSAPLG00000011834) #25	ARMT1 (ENSAPLG00000011927) #26	CCDC170 (ENSAPLG00000011938) #27	ESR1 (ENSAPLG00000004585) #28	ENSAPLG00000017771 #32	ENSAPLG00000019803 #32	ENSAPLG00000027425	ENSAPLG00000020483	ENSAPLG00000017874 #31	ENSAPLG00000029426	ENSAPLG00000006495 #32	MYCT1 (ENSAPLG00000020316) #33	VIP (ENSAPLG00000006708) #34
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723.y #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000163429.D
Japanese quail	MODERN SPECIES	21	SASH1 (ENSCJPG00005005963)	UST (ENSCJPG00005006187)	TAB2 (ENSCJPG00005006196)	ZC3H12D (ENSCJPG00005006197) #7	PPIL4 (ENSCJPG00005006198) #9	GINM1 (ENSCJPG00005006199) #10	KATNA1 (ENSCJPG00005006212) #11	LATS1 (ENSCJPG00005006283) #13	ENSCJPG00005006284	NUP43 (ENSCJPG00005006287) #15	PCMT1 (ENSCJPG00005006305) #16	LRP11 (ENSCJPG00005006308)	PPP1R14C (ENSCJPG00005006377)	IYD (ENSCJPG00005006409) #20	PLEKHG1 (ENSCJPG00005006423) #21	MTHFD1L (ENSCJPG00005006446) #22	AKAP12 (ENSCJPG00005007509) #23	ZBTB2 (ENSCJPG00005007510) #24	RMND1 (ENSCJPG00005007512) #25	CCDC170 (ENSCJPG00005007525) #27	ESR1 (ENSCJPG00005007531) #28	ENSCJPG00005007549 #32	ENSCJPG00005007605 #32	MYCT1 (ENSCJPG00005007730) #33	VIP (ENSCJPG00005007731) #34	FBXO5 (ENSCJPG00005007733) #35	MTRF1L (ENSCJPG00005007734) #36	RGS17 (ENSCJPG00005007740) #37	OPRM1 (ENSCJPG00005007753)	ENSCJPG00005007757	ENSCJPG00005007764
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723.y #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000163429.D
Turkey	MODERN SPECIES	11	SAMD5 (ENSMGAG00000022046)	SASH1 (ENSMGAG00000012577)	UST (ENSMGAG00000012589)	TAB2 (ENSMGAG00000012593)	ZC3H12D (ENSMGAG00000012594) #7	PPIL4 (ENSMGAG00000012596) #9	GINM1 (ENSMGAG00000012604) #10	KATNA1 (ENSMGAG00000012608) #11	LATS1 (ENSMGAG00000012618) #13	NUP43 (ENSMGAG00000012626) #15	PCMT1 (ENSMGAG00000012636) #16	PPP1R14C (ENSMGAG00000012643)	IYD (ENSMGAG00000012644) #20	ENSMGAG00000021541 #21	ENSMGAG00000012651 #21	MTHFD1L (ENSMGAG00000012662) #22	AKAP12 (ENSMGAG00000012673) #23	ZBTB2 (ENSMGAG00000021738) #24	RMND1 (ENSMGAG00000012680) #25	ARMT1 (ENSMGAG00000012685) #26	CCDC170 (ENSMGAG00000012688) #27	ESR1 (ENSMGAG00000012692) #28	SYNE1 (ENSMGAG00000012698) #32	MYCT1 (ENSMGAG00000015856) #33	VIP (ENSMGAG00000012740) #34	MTRF1L (ENSMGAG00000012738) #36	RGS17 (ENSMGAG00000012749) #37	OPRM1 (ENSMGAG00000012751)	ENSMGAG00000012753	ENSMGAG00000012756	SCAF8 (ENSMGAG00000012762)
Chicken	MODERN SPECIES	22	SASH1 (ENSGALG00010005442)	UST (ENSGALG00010005453)	TAB2 (ENSGALG00010006524)	ZC3H12D (ENSGALG00010005459) #7	PPIL4 (ENSGALG00010005468) #9	ENSGALG00010005471	GINM1 (ENSGALG00010005484) #10	KATNA1 (ENSGALG00010005500) #11	LATS1 (ENSGALG00010005504) #13	NUP43 (ENSGALG00010005527) #15	PCMT1 (ENSGALG00010005540) #16	LRP11 (ENSGALG00010005547)	PPP1R14C (ENSGALG00010005553)	IYD (ENSGALG00010005556) #20	PLEKHG1 (ENSGALG00010005568) #21	MTHFD1L (ENSGALG00010005610) #22	AKAP12 (ENSGALG00010005704) #23	ZBTB2 (ENSGALG00010005716) #24	RMND1 (ENSGALG00010005752) #25	ARMT1 (ENSGALG00010005779) #26	CCDC170 (ENSGALG00010005141) #27	ESR1 (ENSGALG00010005186) #28	ENSGALG00010005203 #32	ENSGALG00010005213 #32	ENSGALG00010005216 #31	ENSGALG00010007190 ##32	ENSGALG00010005224 ##32	ENSGALG00010007201 #32	MYCT1 (ENSGALG00010005226) #33	VIP (ENSGALG00010005240) #34	FBXO5 (ENSGALG00010005244) #35
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000163429.D
Golden eagle	MODERN SPECIES	24	SAMD5 (ENSACCG00020005315)	SASH1 (ENSACCG00020005339)	UST (ENSACCG00020005381)	TAB2 (ENSACCG00020005405)	ZC3H12D (ENSACCG00020005459) #7	PPIL4 (ENSACCG00020005495) #9	GINM1 (ENSACCG00020005522) #10	KATNA1 (ENSACCG00020005537) #11	LATS1 (ENSACCG00020005566) #13	NUP43 (ENSACCG00020005581) #15	PCMT1 (ENSACCG00020005602) #16	LRP11 (ENSACCG00020005620)	PPP1R14C (ENSACCG00020005640)	IYD (ENSACCG00020005672) #20	PLEKHG1 (ENSACCG00020005704) #21	MTHFD1L (ENSACCG00020005759) #22	AKAP12 (ENSACCG00020005819) #23	ZBTB2 (ENSACCG00020005841) #24	RMND1 (ENSACCG00020005297) #25	ARMT1 (ENSACCG00020005308) #26	CCDC170 (ENSACCG00020005320) #27	ESR1 (ENSACCG00020005342) #28	SYNE1 (ENSACCG00020006416) #32	MYCT1 (ENSACCG00020007328) #33	VIP (ENSACCG00020007352) #34	FBXO5 (ENSACCG00020007364) #35	MTRF1L (ENSACCG00020007439) #36	RGS17 (ENSACCG00020007480) #37	OPRM1 (ENSACCG00020007494)	ENSACCG00020007507	ENSACCG00020007527
Kakapo	MODERN SPECIES	2	SASH1 (ENSSHBG00005018631)	UST (ENSSHBG00005018620)	TAB2 (ENSSHBG00005018609)	ZC3H12D (ENSSHBG00005018601) #7	PPIL4 (ENSSHBG00005018594) #9	GINM1 (ENSSHBG00005018590) #10	KATNA1 (ENSSHBG00005018585) #11	LATS1 (ENSSHBG00005018579) #13	NUP43 (ENSSHBG00005018573) #15	PCMT1 (ENSSHBG00005018568) #16	LRP11 (ENSSHBG00005018560)	PPP1R14C (ENSSHBG00005018557)	IYD (ENSSHBG00005018551) #20	PLEKHG1 (ENSSHBG00005018548) #21	ENSSHBG00005018545	MTHFD1L (ENSSHBG00005018498) #22	AKAP12 (ENSSHBG00005018480) #23	ZBTB2 (ENSSHBG00005018476) #24	RMND1 (ENSSHBG00005018472) #25	ARMT1 (ENSSHBG00005018468) #26	CCDC170 (ENSSHBG00005018463) #27	ESR1 (ENSSHBG00005018449) #28	SYNE1 (ENSSHBG00005013775) #32	MYCT1 (ENSSHBG00005012266) #33	VIP (ENSSHBG00005012244) #34	FBXO5 (ENSSHBG00005012219) #35	MTRF1L (ENSSHBG00005012193) #36	RGS17 (ENSSHBG00005012171) #37	OPRM1 (ENSSHBG00005012145)	ENSSHBG00005012130	ENSSHBG00005012066
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00390000006394	ENSGT00550000074878	ENSGT01030000234626.B	ENSGT00390000013931	ENSGT00390000011877	ENSGT00530000063558.B	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Great tit	MODERN SPECIES	22	MRPL18 (ENSPMJG00000009371)	TCP1 (ENSPMJG00000009367)	ACAT2 (ENSPMJG00000009365)	WTAP (ENSPMJG00000009363)	SOD2 (ENSPMJG00000009361)	ENSPMJG00000009355	GINM1 (ENSPMJG00000009292) #10	KATNA1 (ENSPMJG00000009228) #11	LATS1 (ENSPMJG00000009227) #13	NUP43 (ENSPMJG00000009226) #15	PCMT1 (ENSPMJG00000009224) #16	LRP11 (ENSPMJG00000009223)	PPP1R14C (ENSPMJG00000009207)	IYD (ENSPMJG00000009205) #20	PLEKHG1 (ENSPMJG00000009185) #21	MTHFD1L (ENSPMJG00000009104) #22	AKAP12 (ENSPMJG00000009097) #23	ZBTB2 (ENSPMJG00000009064) #24	RMND1 (ENSPMJG00000009063) #25	ARMT1 (ENSPMJG00000009061) #26	CCDC170 (ENSPMJG00000009058) #27	ESR1 (ENSPMJG00000009054) #28	ENSPMJG00000009003 #32	ENSPMJG00000008965 #32	MYCT1 (ENSPMJG00000008961) #33	VIP (ENSPMJG00000008960) #34	FBXO5 (ENSPMJG00000008955) #35	MTRF1L (ENSPMJG00000008953) #36	RGS17 (ENSPMJG00000008950) #37	OPRM1 (ENSPMJG00000008946)	ENSPMJG00000008944
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00390000006394	ENSGT00550000074878	ENSGT01030000234626.B	ENSGT00390000013931	ENSGT00390000011877	ENSGT00530000063558.B	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00390000006394	ENSGT00550000074878	ENSGT01030000234626.B	ENSGT00390000013931	ENSGT00390000011877	ENSGT00530000063558.B	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000006394	ENSGT00550000074878	ENSGT01030000234626.B	ENSGT00390000013931	ENSGT00390000011877	ENSGT00530000063558.B	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Common canary	MODERN SPECIES	31	MRPL18 (ENSSCAG00000011255)	TCP1 (ENSSCAG00000011263)	ACAT2 (ENSSCAG00000011272)	WTAP (ENSSCAG00000011282)	SOD2 (ENSSCAG00000011298)	FNDC1 (ENSSCAG00000011311)	GINM1 (ENSSCAG00000011323) #10	KATNA1 (ENSSCAG00000011333) #11	LATS1 (ENSSCAG00000011352) #13	NUP43 (ENSSCAG00000011370) #15	PCMT1 (ENSSCAG00000011396) #16	LRP11 (ENSSCAG00000011398)	PPP1R14C (ENSSCAG00000011401)	IYD (ENSSCAG00000011402) #20	PLEKHG1 (ENSSCAG00000011409) #21	MTHFD1L (ENSSCAG00000011453) #22	AKAP12 (ENSSCAG00000011615) #23	ZBTB2 (ENSSCAG00000011626) #24	RMND1 (ENSSCAG00000011631) #25	ENSSCAG00000011637	ARMT1 (ENSSCAG00000011639) #26	CCDC170 (ENSSCAG00000011646) #27	ESR1 (ENSSCAG00000011670) #28	SYNE1 (ENSSCAG00000012054) #32	MYCT1 (ENSSCAG00000013731) #33	VIP (ENSSCAG00000013737) #34	FBXO5 (ENSSCAG00000013747) #35	MTRF1L (ENSSCAG00000013752) #36	RGS17 (ENSSCAG00000013756) #37	OPRM1 (ENSSCAG00000013760)	ENSSCAG00000013768
Zebra finch	MODERN SPECIES	23	MRPL18 (ENSTGUG00000011414)	TCP1 (ENSTGUG00000011409)	ACAT2 (ENSTGUG00000011404)	WTAP (ENSTGUG00000011389)	SOD2 (ENSTGUG00000024079)	ENSTGUG00000011376	GINM1 (ENSTGUG00000011370) #10	KATNA1 (ENSTGUG00000011351) #11	LATS1 (ENSTGUG00000011347) #13	NUP43 (ENSTGUG00000011345) #15	PCMT1 (ENSTGUG00000011332) #16	LRP11 (ENSTGUG00000011328)	PPP1R14C (ENSTGUG00000020746)	IYD (ENSTGUG00000011323) #20	PLEKHG1 (ENSTGUG00000011318) #21	MTHFD1L (ENSTGUG00000011286) #22	AKAP12 (ENSTGUG00000029620) #23	ZBTB2 (ENSTGUG00000020410) #24	RMND1 (ENSTGUG00000011268) #25	ARMT1 (ENSTGUG00000011263) #26	CCDC170 (ENSTGUG00000011261) #27	ESR1 (ENSTGUG00000011249) #28	ENSTGUG00000011195 #32	ENSTGUG00000024686 #31	ENSTGUG00000019412 #32	MYCT1 (ENSTGUG00000011193) #33	VIP (ENSTGUG00000020465) #34	MTRF1L (ENSTGUG00000011186) #36	RGS17 (ENSTGUG00000011185) #37	OPRM1 (ENSTGUG00000011179)	ENSTGUG00000028366
Medium ground finch	MODERN SPECIES	95	MRPL18 (ENSGFOG00000005807)	TCP1 (ENSGFOG00000005797)	ENSGFOG00000005792	ENSGFOG00000005781	WTAP (ENSGFOG00000005775)	SOD2 (ENSGFOG00000005682)	ENSGFOG00000005628	GINM1 (ENSGFOG00000005603) #10	KATNA1 (ENSGFOG00000005594) #11	LATS1 (ENSGFOG00000005589) #13	NUP43 (ENSGFOG00000005569) #15	PCMT1 (ENSGFOG00000005555) #16	LRP11 (ENSGFOG00000005546)	IYD (ENSGFOG00000005534) #20	PLEKHG1 (ENSGFOG00000005518) #21	MTHFD1L (ENSGFOG00000001800) #22	AKAP12 (ENSGFOG00000001527) #23	ZBTB2 (ENSGFOG00000001524) #24	RMND1 (ENSGFOG00000001514) #25	ARMT1 (ENSGFOG00000001503) #26	ENSGFOG00000001500 #27
Flycatcher	MODERN SPECIES	21	MRPL18 (ENSFALG00000012086)	TCP1 (ENSFALG00000012096)	ACAT2 (ENSFALG00000012103)	ENSFALG00000012108	ENSFALG00000026104	ENSFALG00000012125	GINM1 (ENSFALG00000012135) #10	KATNA1 (ENSFALG00000012149) #11	LATS1 (ENSFALG00000012161) #13	NUP43 (ENSFALG00000012166) #15	PCMT1 (ENSFALG00000026300) #16	LRP11 (ENSFALG00000023095)	ENSFALG00000023388	IYD (ENSFALG00000012182) #20	PLEKHG1 (ENSFALG00000012185) #21	MTHFD1L (ENSFALG00000012200) #22	AKAP12 (ENSFALG00000012244) #23	ZBTB2 (ENSFALG00000027296) #24	RMND1 (ENSFALG00000012263) #25	ARMT1 (ENSFALG00000023321) #26	CCDC170 (ENSFALG00000012277) #27	ESR1 (ENSFALG00000012305) #28	SYNE1 (ENSFALG00000012360) #32	MYCT1 (ENSFALG00000015346) #33	VIP (ENSFALG00000024261) #34	FBXO5 (ENSFALG00000012397) #35	MTRF1L (ENSFALG00000012403) #36	RGS17 (ENSFALG00000012407) #37	OPRM1 (ENSFALG00000012411)	IPCEF1 (ENSFALG00000026673)	ENSFALG00000012421
African ostrich	MODERN SPECIES	394															PLEKHG1 (ENSSCUG00000006059) #21	MTHFD1L (ENSSCUG00000005958) #22	AKAP12 (ENSSCUG00000005911) #23	ZBTB2 (ENSSCUG00000005909) #24	RMND1 (ENSSCUG00000005908) #25	ENSSCUG00000005907 #26	ENSSCUG00000005906 #26	CCDC170 (ENSSCUG00000005904) #27	ESR1 (ENSSCUG00000005902) #28	ENSSCUG00000005898 #32	ENSSCUG00000005891 #32	MYCT1 (ENSSCUG00000005889) #33	VIP (ENSSCUG00000005887) #34	FBXO5 (ENSSCUG00000005886) #35	MTRF1L (ENSSCUG00000005885) #36	RGS17 (ENSSCUG00000005882) #37
Australian saltwater crocodile	MODERN SPECIES	60	SAMD5 (ENSCPRG00005018259)	SASH1 (ENSCPRG00005018257)	UST (ENSCPRG00005018253)	TAB2 (ENSCPRG00005018252)	ENSCPRG00005018250 #7	PPIL4 (ENSCPRG00005018248) #9	GINM1 (ENSCPRG00005018246) #10	KATNA1 (ENSCPRG00005018245) #11	LATS1 (ENSCPRG00005018242) #13	NUP43 (ENSCPRG00005018240) #15	PCMT1 (ENSCPRG00005018239) #16	LRP11 (ENSCPRG00005018237)	PPP1R14C (ENSCPRG00005018235)	IYD (ENSCPRG00005018228) #20	PLEKHG1 (ENSCPRG00005018218) #21	MTHFD1L (ENSCPRG00005018210) #22	AKAP12 (ENSCPRG00005018202) #23	ZBTB2 (ENSCPRG00005018192) #24	RMND1 (ENSCPRG00005018189) #25	ARMT1 (ENSCPRG00005018186) #26	CCDC170 (ENSCPRG00005018179) #27	ESR1 (ENSCPRG00005018167) #28	ENSCPRG00005018146 #32	ENSCPRG00005018130 #32	MYCT1 (ENSCPRG00005018122) #33	VIP (ENSCPRG00005018118) #34	FBXO5 (ENSCPRG00005018113) #35	MTRF1L (ENSCPRG00005018112) #36	RGS17 (ENSCPRG00005018111) #37	OPRM1 (ENSCPRG00005018110)	ENSCPRG00005018107
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Testudinoidea	ANCESTRAL SPECIES		ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388.b #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133.g #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Emydidae	ANCESTRAL SPECIES		ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388.b #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133.g #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000163429.D
painted turtle	MODERN SPECIES	12	SASH1 (ENSCPBG00000016639)	UST (ENSCPBG00000016632)	TAB2 (ENSCPBG00000016627)	ENSCPBG00000016622 #7	ENSCPBG00000016618 #7	PPIL4 (ENSCPBG00000016612) #9	GINM1 (ENSCPBG00000016606) #10	KATNA1 (ENSCPBG00000016599) #11	LATS1 (ENSCPBG00000016594) #13	NUP43 (ENSCPBG00000016592) #15	PCMT1 (ENSCPBG00000016587) #16	LRP11 (ENSCPBG00000016581)	PPP1R14C (ENSCPBG00000016573)	IYD (ENSCPBG00000016570) #20	PLEKHG1 (ENSCPBG00000016555) #21	MTHFD1L (ENSCPBG00000016546) #22	AKAP12 (ENSCPBG00000016538) #23	ZBTB2 (ENSCPBG00000016532) #24	RMND1 (ENSCPBG00000016524) #25	ARMT1 (ENSCPBG00000016517) #26	CCDC170 (ENSCPBG00000016507) #27	ESR1 (ENSCPBG00000016495) #28	ENSCPBG00000016476 #32	ENSCPBG00000016384 #32	MYCT1 (ENSCPBG00000016354) #33	VIP (ENSCPBG00000016353) #34	FBXO5 (ENSCPBG00000016351) #35	MTRF1L (ENSCPBG00000016349) #36	RGS17 (ENSCPBG00000016347) #37	OPRM1 (ENSCPBG00000016340)	ENSCPBG00000016339
Three-toed box turtle	MODERN SPECIES	31	SAMD5 (ENSTMTG00000004731)	SASH1 (ENSTMTG00000004406)	UST (ENSTMTG00000004349)	TAB2 (ENSTMTG00000004322)	ENSTMTG00000004314 #7	PPIL4 (ENSTMTG00000004303) #9	GINM1 (ENSTMTG00000004295) #10	KATNA1 (ENSTMTG00000004230) #11	LATS1 (ENSTMTG00000004215) #13	NUP43 (ENSTMTG00000004187) #15	PCMT1 (ENSTMTG00000004171) #16	LRP11 (ENSTMTG00000004151)	PPP1R14C (ENSTMTG00000004130)	IYD (ENSTMTG00000004119) #20	ENSTMTG00000004099 #21	MTHFD1L (ENSTMTG00000002772) #22	AKAP12 (ENSTMTG00000002678) #23	ZBTB2 (ENSTMTG00000002675) #24	RMND1 (ENSTMTG00000002671) #25	ARMT1 (ENSTMTG00000002665) #26	CCDC170 (ENSTMTG00000002659) #27	ESR1 (ENSTMTG00000002657) #28	ENSTMTG00000002405 #32	ENSTMTG00000002347	ENSTMTG00000002339 #31	ENSTMTG00000002319 #32	MYCT1 (ENSTMTG00000002308) #33	VIP (ENSTMTG00000002297) #34	FBXO5 (ENSTMTG00000002290) #35	MTRF1L (ENSTMTG00000002218) #36	RGS17 (ENSTMTG00000002186) #37
Testudinidae	ANCESTRAL SPECIES	4	ENSGT00950000182906.b.a	ENSGT00510000048701	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388.b #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133.g #28	ENSGT00940000158133.h #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236
Goode s thornscrub tortoise	MODERN SPECIES	17	SAMD5 (ENSGEVG00005011221)	UST (ENSGEVG00005011749)	TAB2 (ENSGEVG00005011836)	ZC3H12D (ENSGEVG00005011865) #7	PPIL4 (ENSGEVG00005011896) #9	GINM1 (ENSGEVG00005011965) #10	KATNA1 (ENSGEVG00005011989) #11	LATS1 (ENSGEVG00005012016) #13	ENSGEVG00005012043 #15	ENSGEVG00005012087 #15	PCMT1 (ENSGEVG00005012105) #16	LRP11 (ENSGEVG00005012143)	PPP1R14C (ENSGEVG00005012375)	IYD (ENSGEVG00005012422) #20	ENSGEVG00005012469 #21	MTHFD1L (ENSGEVG00005012612) #22	AKAP12 (ENSGEVG00005012759) #23	ZBTB2 (ENSGEVG00005012892) #24	RMND1 (ENSGEVG00005012911) #25	ARMT1 (ENSGEVG00005012940) #26	CCDC170 (ENSGEVG00005012970) #27	ESR1 (ENSGEVG00005013158) #28	SYNE1 (ENSGEVG00005015272) #32	MYCT1 (ENSGEVG00005020222) #33	VIP (ENSGEVG00005020226) #34	FBXO5 (ENSGEVG00005020230) #35	MTRF1L (ENSGEVG00005020238) #36	RGS17 (ENSGEVG00005020253) #37	ENSGEVG00005020259	ENSGEVG00005020261	ENSGEVG00005020266
Abingdon island giant tortoise	MODERN SPECIES	869									ENSCABG00000011732	ENSCABG00000011736	B4GALT4 (ENSCABG00000011740)	TMEM39A (ENSCABG00000011742)	ENSCABG00000011746	CHD1L (ENSCABG00000011754)	ENSCABG00000011820 #21	MTHFD1L (ENSCABG00000011822) #22	AKAP12 (ENSCABG00000012018) #23	ZBTB2 (ENSCABG00000012021) #24	ENSCABG00000012023 #25	ENSCABG00000012024	ARMT1 (ENSCABG00000012025) #26	CCDC170 (ENSCABG00000012027) #27	SULF1 (ENSCABG00000012028)
Chinese turtle	MODERN SPECIES	461	UST (ENSPSIG00000015610)	ENSPSIG00000015911	TAB2 (ENSPSIG00000016192)	ZC3H12D (ENSPSIG00000016475) #7	PPIL4 (ENSPSIG00000016651) #9	GINM1 (ENSPSIG00000016675) #10	KATNA1 (ENSPSIG00000017091) #11	LATS1 (ENSPSIG00000017097) #13	NUP43 (ENSPSIG00000017199) #15	PCMT1 (ENSPSIG00000017327) #16	ENSPSIG00000017362	PPP1R14C (ENSPSIG00000017492)	IYD (ENSPSIG00000017499) #20	ENSPSIG00000017546	PLEKHG1 (ENSPSIG00000017610) #21	MTHFD1L (ENSPSIG00000018016) #22	AKAP12 (ENSPSIG00000018242) #23	ZBTB2 (ENSPSIG00000018246) #24	RMND1 (ENSPSIG00000018248) #25	ARMT1 (ENSPSIG00000004092) #26	CCDC170 (ENSPSIG00000004116) #27	ESR1 (ENSPSIG00000004166) #28	ENSPSIG00000004530 #32	ENSPSIG00000004795	ENSPSIG00000004808 #32	ENSPSIG00000004853 #32	MYCT1 (ENSPSIG00000004949) #33	VIP (ENSPSIG00000004987) #34	ENSPSIG00000000120	FBXO5 (ENSPSIG00000005294) #35	MTRF1L (ENSPSIG00000005339) #36
Lepidosauria	ANCESTRAL SPECIES		ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Episquamata	ANCESTRAL SPECIES		ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A
Laterata	ANCESTRAL SPECIES	4	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133.j #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.A	ENSGT00940000163429.D
Common wall lizard	MODERN SPECIES	11	ENSPMRG00000010364	UST (ENSPMRG00000010370)	TAB2 (ENSPMRG00000010381)	ZC3H12D (ENSPMRG00000010385) #7	PPIL4 (ENSPMRG00000010393) #9	GINM1 (ENSPMRG00000010401) #10	KATNA1 (ENSPMRG00000010410) #11	LATS1 (ENSPMRG00000010425) #13	NUP43 (ENSPMRG00000010435) #15	PCMT1 (ENSPMRG00000010445) #16	LRP11 (ENSPMRG00000010457)	ENSPMRG00000010469	PPP1R14C (ENSPMRG00000010476)	IYD (ENSPMRG00000010480) #20	PLEKHG1 (ENSPMRG00000010487) #21	MTHFD1L (ENSPMRG00000010497) #22	AKAP12 (ENSPMRG00000010510) #23	ZBTB2 (ENSPMRG00000010513) #24	RMND1 (ENSPMRG00000010516) #25	ENSPMRG00000010520 #26	ENSPMRG00000010523 #26	ENSPMRG00000010528 #26	CCDC170 (ENSPMRG00000010531) #27	ENSPMRG00000010538 #28	ENSPMRG00000010543 #32	ENSPMRG00000010555 #32	ENSPMRG00000010559 #31	ENSPMRG00000010603 #32	MYCT1 (ENSPMRG00000010748) #33	VIP (ENSPMRG00000010751) #34	FBXO5 (ENSPMRG00000010755) #35
Argentine black and white tegu	MODERN SPECIES	2	ENSSMRG00000022645	SASH1 (ENSSMRG00000022643)	UST (ENSSMRG00000022642)	TAB2 (ENSSMRG00000022641)	ZC3H12D (ENSSMRG00000022640) #7	PPIL4 (ENSSMRG00000022639) #9	GINM1 (ENSSMRG00000022638) #10	KATNA1 (ENSSMRG00000022637) #11	LATS1 (ENSSMRG00000022636) #13	NUP43 (ENSSMRG00000022635) #15	PCMT1 (ENSSMRG00000022634) #16	LRP11 (ENSSMRG00000022633)	PPP1R14C (ENSSMRG00000022632)	IYD (ENSSMRG00000022630) #20	PLEKHG1 (ENSSMRG00000022629) #21	MTHFD1L (ENSSMRG00000022628) #22	AKAP12 (ENSSMRG00000022627) #23	ZBTB2 (ENSSMRG00000022626) #24	RMND1 (ENSSMRG00000022625) #25	ARMT1 (ENSSMRG00000022624) #26	CCDC170 (ENSSMRG00000022623) #27	ESR1 (ENSSMRG00000022622) #28	ENSSMRG00000022621 #32	ENSSMRG00000022490 #32	MYCT1 (ENSSMRG00000022489) #33	VIP (ENSSMRG00000022488) #34	FBXO5 (ENSSMRG00000022487) #35	MTRF1L (ENSSMRG00000022486) #36	RGS17 (ENSSMRG00000022485) #37	ENSSMRG00000022481	OPRM1 (ENSSMRG00000022480)
Toxicofera	ANCESTRAL SPECIES		ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.D
Elapidae	ANCESTRAL SPECIES		ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00960000189587	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133.l #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00950000183154.a #34	ENSGT00530000063692.b #35	ENSGT00940000155683 #36	ENSGT00940000155393.d #37	ENSGT00940000158236	ENSGT00940000163429.D.e
Elapidae_a	ANCESTRAL SPECIES	34	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22
Acanthophiinae	ANCESTRAL SPECIES	34	ENSGT00510000048701	ENSGT00940000156778	ENSGT00530000063408.A	ENSGT00940000158473	ENSGT00940000161388 #7	ENSGT00940000156283 #9	ENSGT00390000008373 #10	ENSGT00940000156638 #11	ENSGT00940000157684 #13	ENSGT00390000004803 #15	ENSGT00950000183032.B.b.b #16	ENSGT00940000161275	ENSGT00950000182985.b.a	ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22
Eastern brown snake	MODERN SPECIES	28	SAMD5 (ENSPTXG00000012231)	SASH1 (ENSPTXG00000012232)	UST (ENSPTXG00000012234)	TAB2 (ENSPTXG00000012235)	ENSPTXG00000012236 #7	PPIL4 (ENSPTXG00000012237) #9	GINM1 (ENSPTXG00000012238) #10	KATNA1 (ENSPTXG00000012239) #11	LATS1 (ENSPTXG00000012240) #13	NUP43 (ENSPTXG00000012241) #15	PCMT1 (ENSPTXG00000012242) #16	LRP11 (ENSPTXG00000012243)	PPP1R14C (ENSPTXG00000012244)	IYD (ENSPTXG00000012245) #20	PLEKHG1 (ENSPTXG00000012246) #21	MTHFD1L (ENSPTXG00000012263) #22
Mainland tiger snake	MODERN SPECIES	14	SASH1 (ENSNSUG00000010745)	UST (ENSNSUG00000010746)	TAB2 (ENSNSUG00000010766)	ENSNSUG00000010768 #7	PPIL4 (ENSNSUG00000010769) #9	GINM1 (ENSNSUG00000010782) #10	KATNA1 (ENSNSUG00000010783) #11	LATS1 (ENSNSUG00000010785) #13	NUP43 (ENSNSUG00000010787) #15	PCMT1 (ENSNSUG00000010789) #16	ENSNSUG00000010790	LRP11 (ENSNSUG00000010792)	PPP1R14C (ENSNSUG00000010793)	IYD (ENSNSUG00000010796) #20	PLEKHG1 (ENSNSUG00000010798) #21	MTHFD1L (ENSNSUG00000010804) #22
Indian cobra	MODERN SPECIES		ENSNNAG00000000227	SASH1 (ENSNNAG00000000222)	UST (ENSNNAG00000000217)	TAB2 (ENSNNAG00000000214)	ZC3H12D (ENSNNAG00000000211) #7	PPIL4 (ENSNNAG00000000206) #9	GINM1 (ENSNNAG00000000199) #10	KATNA1 (ENSNNAG00000000190) #11	LATS1 (ENSNNAG00000000182) #13	NUP43 (ENSNNAG00000000179) #15	PCMT1 (ENSNNAG00000000170) #16	LRP11 (ENSNNAG00000000167)	PPP1R14C (ENSNNAG00000000163)	IYD (ENSNNAG00000000160) #20	PLEKHG1 (ENSNNAG00000000156) #21	MTHFD1L (ENSNNAG00000000154) #22	ENSNNAG00000000153 #23	ZBTB2 (ENSNNAG00000000152) #24	RMND1 (ENSNNAG00000000151) #25	ARMT1 (ENSNNAG00000000149) #26	CCDC170 (ENSNNAG00000000148) #27	ESR1 (ENSNNAG00000000145) #28	ENSNNAG00000000142 #32	MYCT1 (ENSNNAG00000000136) #33	VIP (ENSNNAG00000000134) #34	FBXO5 (ENSNNAG00000000132) #35	MTRF1L (ENSNNAG00000000123) #36	RGS17 (ENSNNAG00000000122) #37	ENSNNAG00000000120	ENSNNAG00000000118	OPRM1 (ENSNNAG00000000115)
Lizard	MODERN SPECIES	873		ENSACAG00000039439	TAB2 (ENSACAG00000006999)	ZC3H12D (ENSACAG00000006984) #7	PPIL4 (ENSACAG00000006936) #9	ENSACAG00000006919 #10	KATNA1 (ENSACAG00000006866) #11	LATS1 (ENSACAG00000006840) #13	NUP43 (ENSACAG00000006777) #15	PCMT1 (ENSACAG00000006734) #16	LRP11 (ENSACAG00000006719)	PPP1R14C (ENSACAG00000006718)	IYD (ENSACAG00000006702) #20	ENSACAG00000045327	PLEKHG1 (ENSACAG00000006603) #21	MTHFD1L (ENSACAG00000006340) #22	ENSACAG00000045552 #23	ZBTB2 (ENSACAG00000006317) #24	RMND1 (ENSACAG00000006275) #25	ARMT1 (ENSACAG00000006306) #26	CCDC170 (ENSACAG00000006265) #27	esr1 (ENSACAG00000006213) #28	ENSACAG00000037197	ENSACAG00000005645 #32
tuatara	MODERN SPECIES	207	UST (ENSSPUG00000005540)	TAB2 (ENSSPUG00000005607)	ENSSPUG00000005636 #7	ENSSPUG00000005643 #7	PPIL4 (ENSSPUG00000005655) #9	GINM1 (ENSSPUG00000005672) #10	KATNA1 (ENSSPUG00000005705) #11	ENSSPUG00000005722	LATS1 (ENSSPUG00000005751) #13	ENSSPUG00000005769 #15	PCMT1 (ENSSPUG00000005816) #16	LRP11 (ENSSPUG00000005827)	PPP1R14C (ENSSPUG00000005841)	IYD (ENSSPUG00000005921) #20	ENSSPUG00000005940 #21	MTHFD1L (ENSSPUG00000005964) #22	ZBTB2 (ENSSPUG00000006004) #24	RMND1 (ENSSPUG00000006020) #25	ARMT1 (ENSSPUG00000006097) #26	CCDC170 (ENSSPUG00000006108) #27	ENSSPUG00000006170 #28	ESR1 (ENSSPUG00000006184) #28	CTNND2 (ENSSPUG00000006205)	DAP (ENSSPUG00000006225)	ENSSPUG00000006234	SNRNP48 (ENSSPUG00000006257)	ROPN1L (ENSSPUG00000006286)	MARCHF6 (ENSSPUG00000006375)
Anura	ANCESTRAL SPECIES	237														ENSGT00390000004348 #20	ENSGT00940000157723 #21	ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT01100000263524.G	ENSGT00940000159330	ENSGT00940000153370.a.b	ENSGT00390000002675	ENSGT00940000158461	ENSGT00390000018361	ENSGT01050000244948.c.b	ENSGT00940000153467.a.a	ENSGT00390000010101
Frog	MODERN SPECIES	5	adgrg6 (ENSXETG00000030163)	gje1 (ENSXETG00000049272)	slc22a2 (ENSXETG00000033727)	igf2r (ENSXETG00000021138)	tcp1 (ENSXETG00000038604)	acat2 (ENSXETG00000021174)	wtap (ENSXETG00000021175)	sod2 (ENSXETG00000021180)	fndc1 (ENSXETG00000035120)	spast (ENSXETG00000011392)	ttll2 (ENSXETG00000027373)	desi2 (ENSXETG00000045919)	hnrnpu (ENSXETG00000011386)	iyd (ENSXETG00000011383) #20	plekhg1 (ENSXETG00000007619) #21	mthfd1l (ENSXETG00000013956) #22	akap12 (ENSXETG00000037915) #23	opn6a (ENSXETG00000022282)	vit (ENSXETG00000022285)	fam89a (ENSXETG00000039518)	arv1 (ENSXETG00000026359)	ttc13 (ENSXETG00000022287)	c1orf198 (ENSXETG00000049317)	ENSXETG00000048087	stx11 (ENSXETG00000041475)	utrn (ENSXETG00000022290)	ENSXETG00000048985	epm2a (ENSXETG00000017691)	birc6 (ENSXETG00000017697)	ENSXETG00000043085	ttc27 (ENSXETG00000017701)
Leishan spiny toad	MODERN SPECIES	7	GJB7 (ENSLLEG00000026785)	ENSLLEG00000026839	SMIM8 (ENSLLEG00000026892)	ENSLLEG00000026952	SLC35A1 (ENSLLEG00000027268)	RARS2 (ENSLLEG00000027332)	ORC3 (ENSLLEG00000027459)	AKIRIN2 (ENSLLEG00000028141)	PNISR (ENSLLEG00000028196)	ENSLLEG00000028268	COQ3 (ENSLLEG00000028305)	IYD (ENSLLEG00000028358) #20	PLEKHG1 (ENSLLEG00000028393) #21	ENSLLEG00000028603	ENSLLEG00000028619	MTHFD1L (ENSLLEG00000028652) #22	ENSLLEG00000028923	AKAP12 (ENSLLEG00000028941) #23	ENSLLEG00000028958	ENSLLEG00000028966	ENSLLEG00000028977	VIT (ENSLLEG00000029010)	FAM89A (ENSLLEG00000029141)	ARV1 (ENSLLEG00000029159)	TTC13 (ENSLLEG00000029203)	C1orf198 (ENSLLEG00000029424)	ENSLLEG00000029446	STX11 (ENSLLEG00000029458)	UTRN (ENSLLEG00000029488)	ENSLLEG00000029658	ENSLLEG00000029677
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	2303																ENSLACG00000007772 #22	ENSLACG00000007390
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	2529															PLEKHG1 (ENSLACG00000001432) #21	ENSLACG00000004246 #22	ENSLACG00000005876 #22
Coelacanth	MODERN SPECIES	2529														PLEKHG1 (ENSLACG00000001432) #21	ENSLACG00000004246 #22	ENSLACG00000005876 #22
Actinopterygii	ANCESTRAL SPECIES	69																ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00390000012924.a #27	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000155913	ENSGT00390000007183	ENSGT00940000164803	ENSGT00940000155566	ENSGT00390000012588
Neopterygii	ANCESTRAL SPECIES	88																ENSGT00940000157477 #22	ENSGT00730000111244 #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000155913	ENSGT00390000007183	ENSGT00940000164803	ENSGT00940000155566	ENSGT00390000012588	ENSGT00530000065281
Osteoglossocephalai	ANCESTRAL SPECIES	2	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00940000156778.k	ENSGT00510000048701.b	ENSGT00950000182906.b.a.i.a	ENSGT00940000162477.d	ENSGT01030000234595.A.b.a.a	ENSGT00730000111123	ENSGT00940000163723.B	ENSGT00950000183204.b.b.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642 #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000007183	ENSGT00940000155913.d
Clupeocephala	ANCESTRAL SPECIES	104	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00390000012924.a #27	ENSGT00940000154481.a.a ##32	ENSGT00390000011642.f #33	ENSGT00940000155913.c	ENSGT00940000156674	ENSGT00940000156509	ENSGT00940000155086.A	ENSGT00490000043329.a.b.g.a	ENSGT01030000234527.A.a.a.b.a	ENSGT00940000155459.x.b	ENSGT00940000153897.b.a.b	ENSGT00940000164272
Otomorpha	ANCESTRAL SPECIES	166	ENSGT00940000156557.g	ENSGT00940000154790.a.a.b.h	ENSGT00940000157082	ENSGT00940000156874	ENSGT00940000156560.h	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000165866	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00390000012924.a #27	ENSGT00940000154481.a.a ##32	ENSGT00390000011642.f #33	ENSGT00940000155913.c	ENSGT00940000156674	ENSGT00940000156509	ENSGT00950000182941.a.a.a.b
Otophysi	ANCESTRAL SPECIES	113	ENSGT00390000001278.b.j	ENSGT00940000154206.a	ENSGT00530000063883	ENSGT00940000156671	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640	ENSGT00940000162303.a.a.b	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222.h.a	ENSGT00510000047616.a.b	ENSGT01050000244948.c.b.a.a.a.f	ENSGT01050000244948.c.b.a.a.a.e	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00390000012924.a #27	ENSGT00940000154481.a.a ##32	ENSGT00390000011642.f #33	ENSGT00940000155913.c	ENSGT00940000156674	ENSGT00940000156509	ENSGT00390000010056.a	ENSGT01030000234517.H.b.l	ENSGT00940000156491.a.c	ENSGT00390000004700.b	ENSGT00940000171352
Characiphysae	ANCESTRAL SPECIES	4	ENSGT00940000157624.a	ENSGT00390000011890	ENSGT00390000016097.c	ENSGT00940000164083	ENSGT00940000159153	ENSGT00940000157159.f	ENSGT00940000155944.f.b	ENSGT00940000157848.a.b	ENSGT00950000183128.C	ENSGT00530000064011.c	ENSGT00950000182808.a.a.b.a.c	ENSGT00940000158275	ENSGT00940000157120.c	ENSGT01010000222336.a.a.a.a.b	ENSGT00950000182998.B	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00390000012924.a #27	ENSGT00940000154481.a.a ##32	ENSGT00390000011642.f #33	ENSGT00940000155913.c	ENSGT00940000156674	ENSGT00940000156509	ENSGT00390000010056.a	ENSGT01030000234517.H.b.l	ENSGT00940000156491.a.c	ENSGT00390000004700.b	ENSGT00940000171352	ENSGT00390000017953.B
Channel catfish	MODERN SPECIES	17	ZFYVE1 (ENSIPUG00000019016)	dcaf4 (ENSIPUG00000019045)	dpf3 (ENSIPUG00000019062)	rgs6 (ENSIPUG00000019099)	sipa1l1 (ENSIPUG00000019158)	ENSIPUG00000019228	rab15 (ENSIPUG00000019237)	fntb (ENSIPUG00000019260)	max (ENSIPUG00000019282)	SLC10A1 (ENSIPUG00000019309)	susd6 (ENSIPUG00000019336)	ENSIPUG00000019348	ENSIPUG00000019351	ENSIPUG00000019364	gpr176 (ENSIPUG00000019370)	mthfd1l (ENSIPUG00000019383) #22	akap12b (ENSIPUG00000019441) #23	zbtb2 (ENSIPUG00000019462) #24	armt1 (ENSIPUG00000019467) #26	esr1 (ENSIPUG00000019477) #28	ENSIPUG00000019547 #32	ENSIPUG00000019603	ENSIPUG00000019613	ENSIPUG00000019623 #32	ENSIPUG00000019651 #32	myct1 (ENSIPUG00000019673) #33	serac1 (ENSIPUG00000019676)	gtf2h5 (ENSIPUG00000019693)	ENSIPUG00000019702	nrbp1 (ENSIPUG00000019721)	capn3b (ENSIPUG00000019776)
Characiphysae_b	ANCESTRAL SPECIES	13	ENSGT00940000157624.a	ENSGT00390000011890	ENSGT00390000016097.c	ENSGT00940000164083	ENSGT00940000159153	ENSGT00940000157159.f	ENSGT00940000155944.f.b	ENSGT00940000157848.a.b	ENSGT00950000183128.C	ENSGT00530000064011.c	ENSGT00950000182808.a.a.b.a.c	ENSGT00940000158275	ENSGT00940000157120.c	ENSGT01010000222336.a.a.a.a.b	ENSGT00950000182998.B	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00390000012924.a #27	ENSGT00940000154481.a.a ##32	ENSGT00390000011642.f #33	ENSGT00940000155913.c	ENSGT00940000156674	ENSGT00940000156509	ENSGT00390000010056.a	ENSGT01030000234517.H.b.l	ENSGT00940000156491.a.c	ENSGT00390000004700.b	ENSGT00940000171352	ENSGT00390000017953.B
Characoidei	ANCESTRAL SPECIES	57	ENSGT00940000157624.a	ENSGT00390000011890	ENSGT00390000016097.c	ENSGT00940000164083	ENSGT00940000159153	ENSGT00940000157159.f	ENSGT00940000155944.f.b	ENSGT00940000157848.a.b	ENSGT00950000183128.C	ENSGT00530000064011.c	ENSGT00950000182808.a.a.b.a.c	ENSGT00940000158275	ENSGT00940000157120.c	ENSGT01010000222336.a.a.a.a.b.w	ENSGT00950000182998.B	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00390000012924.a #27	ENSGT00940000154481.a.a ##32	ENSGT00390000011642.f #33	ENSGT00940000155913.c	ENSGT00940000156674	ENSGT00940000156509	ENSGT00390000010056.a	ENSGT01030000234517.H.b.l	ENSGT00940000156491.a.c	ENSGT00390000004700.b	ENSGT00940000171352	ENSGT00390000017953.B
Red-bellied piranha	MODERN SPECIES	23	wdr21 (ENSPNAG00000010557)	dpf3 (ENSPNAG00000010647)	rgs6 (ENSPNAG00000001548)	sipa1l1 (ENSPNAG00000001597)	rab15 (ENSPNAG00000011215)	fntb (ENSPNAG00000011222)	max (ENSPNAG00000011232)	SLC10A1 (ENSPNAG00000011239)	srsf5b (ENSPNAG00000011262)	susd6 (ENSPNAG00000011275)	ENSPNAG00000011289	ENSPNAG00000011294	ENSPNAG00000007166	ENSPNAG00000011313	gpr176 (ENSPNAG00000011327)	mthfd1l (ENSPNAG00000011455) #22	akap12b (ENSPNAG00000001756) #23	zbtb2b (ENSPNAG00000001760) #24	armt1 (ENSPNAG00000011531) #26	esr1 (ENSPNAG00000012604) #28	SYNE1 (ENSPNAG00000002509) #32	myct1a (ENSPNAG00000013026) #33	gtf2h5 (ENSPNAG00000013046)	serac1 (ENSPNAG00000013115)	ENSPNAG00000013121	nrbp1 (ENSPNAG00000013163)	CAPN3 (ENSPNAG00000013182)	churc1 (ENSPNAG00000013201)	ttbk2b (ENSPNAG00000002635)	slc35f6 (ENSPNAG00000013243)	mideasa (ENSPNAG00000013274)
Mexicana tetra	MODERN SPECIES	18	pigh (ENSAMXG00000039078)	ZFYVE1 (ENSAMXG00000017301)	wdr21 (ENSAMXG00000017318)	dpf3 (ENSAMXG00000029110)	rgs6 (ENSAMXG00000043548)	sipa1l1 (ENSAMXG00000017380)	rab15 (ENSAMXG00000043951)	fntb (ENSAMXG00000017420)	max (ENSAMXG00000017435)	SLC10A1 (ENSAMXG00000011927)	srsf5b (ENSAMXG00000011932)	susd6 (ENSAMXG00000030646)	ENSAMXG00000034531	ENSAMXG00000037553	gpr176 (ENSAMXG00000011944)	mthfd1l (ENSAMXG00000030844) #22	akap12b (ENSAMXG00000006246) #23	zbtb2b (ENSAMXG00000032501) #24	armt1 (ENSAMXG00000041252) #26	esr1 (ENSAMXG00000006267) #28	SYNE1 (ENSAMXG00000006306) #32	myct1a (ENSAMXG00000034945) #33	serac1 (ENSAMXG00000006378)	gtf2h5 (ENSAMXG00000032201)	ENSAMXG00000006381	nrbp1 (ENSAMXG00000006393)	CAPN3 (ENSAMXG00000006422)	churc1 (ENSAMXG00000044036)	ttbk2b (ENSAMXG00000006440)	slc35f6 (ENSAMXG00000011284)	mideasa (ENSAMXG00000011269)
Electric eel	MODERN SPECIES	3	pigh (ENSEEEG00000013310)	ZFYVE1 (ENSEEEG00000013312)	wdr21 (ENSEEEG00000013318)	ENSEEEG00000013321	dpf3 (ENSEEEG00000013322)	rgs6 (ENSEEEG00000013328)	sipa1l1 (ENSEEEG00000013413)	rab15 (ENSEEEG00000013452)	fntb (ENSEEEG00000013459)	max (ENSEEEG00000013517)	SLC10A1 (ENSEEEG00000013523)	srsf5b (ENSEEEG00000013524)	susd6 (ENSEEEG00000013526)	acot22 (ENSEEEG00000013527)	gpr176 (ENSEEEG00000013529)	mthfd1l (ENSEEEG00000013543) #22	akap12b (ENSEEEG00000013613) #23	zbtb2b (ENSEEEG00000013616) #24	armt1 (ENSEEEG00000013619) #26	esr1 (ENSEEEG00000013622) #28	ENSEEEG00000013638 #32	ENSEEEG00000013667	ENSEEEG00000013670	ENSEEEG00000013676 #32	ENSEEEG00000013678	myct1a (ENSEEEG00000013679) #33	serac1 (ENSEEEG00000013683)	gtf2h5 (ENSEEEG00000013773)	ENSEEEG00000013777	nrbp1 (ENSEEEG00000013804)	CAPN3 (ENSEEEG00000014368)
Cyprinoidei	ANCESTRAL SPECIES	24	ENSGT00950000182906.b.a.i.a	ENSGT00940000162477.d	ENSGT01030000234595.A.b.a.a	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.b.b.b.a.b.a.a	ENSGT00940000154664.h.a	ENSGT00730000111123	ENSGT00940000163723.B	ENSGT00950000183204.b.b.b	ENSGT00940000153467.a.a.gc	ENSGT00990000210035	ENSGT01050000244948.c.b.b	ENSGT00730000111244.a.a #23	ENSGT00510000047616.a.b	ENSGT01050000244948.c.b.a.a.a.f	ENSGT01050000244948.c.b.a.a.a.e	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401.h #24	ENSGT00390000013337 #25	ENSGT00390000012924.a #27	ENSGT00940000154481.a.a ##32	ENSGT00390000011642.f #33	ENSGT00940000155913.c	ENSGT00940000156674	ENSGT00940000156509	ENSGT00390000010056.a	ENSGT01030000234517.H.b.l	ENSGT00940000156491.a.c	ENSGT00390000004700.b	ENSGT00940000171352	ENSGT00940000154430.c.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	133					ENSGT00940000154573.bb.a	ENSGT00940000156211.a.a.c	ENSGT00440000033640.f	ENSGT00940000162303.a.a.b.b	ENSGT00940000163866.a.b.d	ENSGT00940000162937.a.a.c	ENSGT00390000010872.k	ENSGT00940000166222.h.a.b	ENSGT00510000047616.a.b.a	ENSGT01050000244948.c.b.a.a.a.f.b	ENSGT01050000244948.c.b.a.a.a.e.b	ENSGT00940000157477.a #22	ENSGT00730000111244.a.b.a #23	ENSGT00940000158401.h.d.b #24	ENSGT00530000064023.i #26	ENSGT00940000158133.a #28	ENSGT00940000154481.a.b.c #32	ENSGT00390000011642.e.a.a #33	ENSGT00390000003560.c	ENSGT00390000004028	ENSGT00390000016613.d.a.a	ENSGT00940000155605.a.a.c	ENSGT00940000156092.a.a	ENSGT00940000157336.p	ENSGT00390000011163.g	ENSGT00940000165020.a.b	ENSGT00390000017237.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1043													si:dkey-25e12.3 (ENSCARG00000061226)	stx11b.1 (ENSCARG00000061277)	stx11b.2 (ENSCARG00000061293)	mthfd1l (ENSCARG00000061661) #22
Goldfish	MODERN SPECIES	12	PPP4R4 (ENSCARG00000030085)	ENSCARG00000030116	vrtn (ENSCARG00000030120)	zgc:153157 (ENSCARG00000030126)	zbtb1 (ENSCARG00000030133)	ENSCARG00000030145	MYLK4 (ENSCARG00000030159)	gmds (ENSCARG00000030186)	foxc1b (ENSCARG00000030296)	ENSCARG00000030302	exoc2 (ENSCARG00000030324)	ENSCARG00000030406	si:dkey-25e12.3 (ENSCARG00000030455)	stx11b.1 (ENSCARG00000030484)	stx11b.2 (ENSCARG00000030489)	mthfd1l (ENSCARG00000030566) #22	akap12b (ENSCARG00000031106) #23	zbtb2b (ENSCARG00000031134) #24	armt1 (ENSCARG00000031148) #26	esr1 (ENSCARG00000031177) #28	SYNE1 (ENSCARG00000031510) #32	myct1a (ENSCARG00000035172) #33	serac1 (ENSCARG00000035245)	gtf2h5 (ENSCARG00000038794)	ENSCARG00000038814	nrbp1 (ENSCARG00000038875)	CAPN3 (ENSCARG00000039169)	churc1 (ENSCARG00000039243)	ttbk2b (ENSCARG00000039277)	slc35f6 (ENSCARG00000039297)	mideasa (ENSCARG00000039332)
Cyprininae_a	ANCESTRAL SPECIES	34	ENSGT00940000156671.m	ENSGT00940000155144.n.r.a.a	ENSGT00530000063867.a.a.y	ENSGT00530000063867.a.b.r	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.b.a.a.b	ENSGT00940000154573.bb.a	ENSGT00940000156211.a.a.c	ENSGT00440000033640.f	ENSGT00940000162303.a.a.b.b	ENSGT00940000163866.a.b.d	ENSGT00940000162937.a.a.c	ENSGT00390000010872.k	ENSGT00940000166222.h.a.b	ENSGT01050000244948.c.b.a.a.a.f.b	ENSGT01050000244948.c.b.a.a.a.e.b	ENSGT00940000157477.a #22	ENSGT00730000111244.a.b.a #23	ENSGT00940000158401.h.d.b #24	ENSGT00530000064023.i #26	ENSGT00940000158133.a #28	ENSGT00940000154481.a.b.c #32	ENSGT00390000011642.e.a.a #33	ENSGT00390000003560.c	ENSGT00390000004028	ENSGT00390000016613.d.a.a	ENSGT00940000155605.a.a.c	ENSGT00940000156092.a.a.e	ENSGT00940000157336.p	ENSGT00390000011163.g	ENSGT00940000165020.a.b	ENSGT00390000017237.b
Common carp reference	MODERN SPECIES	34	si:dkey-177p2.6 (ENSCCRG00000070785)	ENSCCRG00000070390	cdca4 (ENSCCRG00000065990)	ENSCCRG00000077365	serpinb1 (ENSCCRG00000069590)	MYLK4 (ENSCCRG00000007674)	gmds (ENSCCRG00000067545)	foxc1b (ENSCCRG00000053236)	ENSCCRG00000010164	foxq1b (ENSCCRG00000010160)	exoc2 (ENSCCRG00000007610)	ENSCCRG00000000279	si:dkey-25e12.3 (ENSCCRG00000055733)	stx11b.1 (ENSCCRG00000057591)	stx11b.2 (ENSCCRG00000079424)	mthfd1l (ENSCCRG00000000201) #22	akap12b (ENSCCRG00000064281) #23	armt1 (ENSCCRG00000059660) #26	zbtb2b (ENSCCRG00000005790) #24	esr1 (ENSCCRG00000036810) #28	ENSCCRG00000079711 #32	myct1a (ENSCCRG00000041991) #33	serac1 (ENSCCRG00000041994)	ENSCCRG00000045050	nrbp1 (ENSCCRG00000048040)	ENSCCRG00000047054	churc1 (ENSCCRG00000053928)	ttbk2b (ENSCCRG00000063210)	slc35f6 (ENSCCRG00000080634)	mideasa (ENSCCRG00000061847)	exoc1 (ENSCCRG00000047478)
Golden-line barbel	MODERN SPECIES	543						SERPINB1 (ENSSGRG00000046748)	MYLK4 (ENSSGRG00000046747)	gmds (ENSSGRG00000046704)	foxc1b (ENSSGRG00000046700)	ENSSGRG00000046699	foxq1b (ENSSGRG00000046697)	exoc2 (ENSSGRG00000046605)	ENSSGRG00000046589	ENSSGRG00000046576	si:dkey-25e12.3 (ENSSGRG00000046572)	mthfd1l (ENSSGRG00000046568) #22	akap12b (ENSSGRG00000046560) #23	zbtb2b (ENSSGRG00000046557) #24	armt1 (ENSSGRG00000046554) #26	esr1 (ENSSGRG00000046485) #28	SYNE1 (ENSSGRG00000046430) #32	myct1a (ENSSGRG00000046406) #33	serac1 (ENSSGRG00000046219)	gtf2h5 (ENSSGRG00000046213)	ENSSGRG00000046211	nrbp1 (ENSSGRG00000045462)	ENSSGRG00000045425	ENSSGRG00000045424	churc1 (ENSSGRG00000045416)	ttbk2b (ENSSGRG00000045414)	slc35f6 (ENSSGRG00000045413)
Cyprininae	ANCESTRAL SPECIES	567					ENSGT00940000154573.bb.b	ENSGT00940000156211.a.a.d	ENSGT00440000033640.e	ENSGT00940000162303.a.a.b.a	ENSGT00940000163866.a.b.c	ENSGT00940000162937.a.a.d	ENSGT00390000010872.l	ENSGT00940000166222.h.a.a	ENSGT00510000047616.a.b.b	ENSGT01050000244948.c.b.a.a.a.f.a	ENSGT01050000244948.c.b.a.a.a.e.a	ENSGT00940000157477.b #22	ENSGT00730000111244.a.b.b #23	ENSGT00940000158401.h.d.a #24	ENSGT00530000064023.j #26	ENSGT00940000158133.b #28	ENSGT00940000154481.a.b.d #32	ENSGT00390000011642.e.a.b #33	ENSGT00390000003560.d
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	39	gtf2h5 (ENSCARG00000022365)	serac1 (ENSCARG00000021857)	myct1a (ENSCARG00000021812) #33	esr1 (ENSCARG00000019585) #28	serpinb1 (ENSCARG00000019574)	MYLK4 (ENSCARG00000053130)	gmds (ENSCARG00000052989)	foxc1b (ENSCARG00000052969)	ENSCARG00000052964	foxq1b (ENSCARG00000052959)	exoc2 (ENSCARG00000052720)	ENSCARG00000052638	si:dkey-25e12.3 (ENSCARG00000052627)	stx11b.1 (ENSCARG00000052624)	stx11b.2 (ENSCARG00000052621)	mthfd1l (ENSCARG00000047842) #22	akap12b (ENSCARG00000047651) #23	zbtb2b (ENSCARG00000047600) #24	serpinb1l2 (ENSCARG00000047516)	ENSCARG00000047503	ENSCARG00000047482	esr1 (ENSCARG00000047209) #28	zbtb2b (ENSCARG00000047181) #24	ENSCARG00000047173	ENSCARG00000047144	ENSCARG00000047131	ENSCARG00000047128	ENSCARG00000047114	chac1 (ENSCARG00000047105)	snx3 (ENSCARG00000047097)	nr2e1 (ENSCARG00000047064)
Goldfish	MODERN SPECIES	154												ENSCARG00000058630	si:dkey-25e12.3 (ENSCARG00000058620)	stx11b.1 (ENSCARG00000058607)	stx11b.2 (ENSCARG00000058599)	mthfd1l (ENSCARG00000057114) #22
Cyprininae_a	ANCESTRAL SPECIES	284													ENSGT00510000047616.a.b.b	ENSGT01050000244948.c.b.a.a.a.f.a	ENSGT01050000244948.c.b.a.a.a.e.a	ENSGT00940000157477.b #22	ENSGT00730000111244.a.b.b #23	ENSGT00940000158401.h.d.a #24	ENSGT00530000064023.j.a #26	ENSGT00530000064023.j.b #26	ENSGT00940000158133.b #28	ENSGT00940000154481.a.b.d #32	ENSGT00390000011642.e.a.b #33	ENSGT00390000003560.d	ENSGT00390000016613.d.a.b	ENSGT00940000155605.a.a.d	ENSGT00940000156092.a.a.f	ENSGT00390000011163.h	ENSGT00940000165020.a.a	ENSGT00390000017237.a	ENSGT00940000157459.a.c
Common carp reference	MODERN SPECIES	28	si:dkey-177p2.6 (ENSCCRG00000082100)	cdca4 (ENSCCRG00000076594)	ENSCCRG00000007523	ENSCCRG00000007484	serpinb1l2 (ENSCCRG00000054466)	ENSCCRG00000072040	foxc1b (ENSCCRG00000081149)	gmds (ENSCCRG00000007580)	ENSCCRG00000069409	exoc2 (ENSCCRG00000006061)	ENSCCRG00000005982	ENSCCRG00000050165	si:dkey-25e12.3 (ENSCCRG00000052880)	stx11b.1 (ENSCCRG00000081745)	stx11b.2 (ENSCCRG00000067273)	mthfd1l (ENSCCRG00000015363) #22	akap12b (ENSCCRG00000078447) #23	zbtb2b (ENSCCRG00000071312) #24	armt1 (ENSCCRG00000005786) #26	esr1 (ENSCCRG00000004749) #28	myct1a (ENSCCRG00000042367) #33	ENSCCRG00000003368 #32	serac1 (ENSCCRG00000042387)	ENSCCRG00000042000	nrbp1 (ENSCCRG00000045089)	ENSCCRG00000062630	churc1 (ENSCCRG00000012062)	ttbk2b (ENSCCRG00000047463)	slc35f6 (ENSCCRG00000043989)	mideasa (ENSCCRG00000072520)	zgc:153896 (ENSCCRG00000048092)
Golden-line barbel	MODERN SPECIES	555								gmds (ENSSGRG00000042703)	foxc1b (ENSSGRG00000042702)	ENSSGRG00000042701	foxq1b (ENSSGRG00000042700)	exoc2 (ENSSGRG00000041926)	si:dkey-25e12.3 (ENSSGRG00000041898)	stx11b.1 (ENSSGRG00000041897)	stx11b.2 (ENSSGRG00000041896)	mthfd1l (ENSSGRG00000041895) #22	akap12b (ENSSGRG00000041893) #23	zbtb2b (ENSSGRG00000041890) #24	armt1 (ENSSGRG00000041888) #26	esr1 (ENSSGRG00000041830) #28	SYNE1 (ENSSGRG00000041482) #32	serac1 (ENSSGRG00000041132)	ENSSGRG00000041124	nrbp1 (ENSSGRG00000041060)	ENSSGRG00000041055	churc1 (ENSSGRG00000041054)	ttbk2b (ENSSGRG00000041052)	slc35f6 (ENSSGRG00000041050)	mideasa (ENSSGRG00000041049)	zgc:153896 (ENSSGRG00000041048)	exoc1 (ENSSGRG00000039757)
Zebrafish	MODERN SPECIES	12	ENSDARG00000093972	serpinb1l2 (ENSDARG00000070396)	rwdd2b (ENSDARG00000055426)	ENSDARG00000095125	serpinb1 (ENSDARG00000055416)	MYLK4 (ENSDARG00000055412)	gmds (ENSDARG00000026629)	foxc1b (ENSDARG00000055398)	ENSDARG00000070389	foxq1b (ENSDARG00000055395)	exoc2 (ENSDARG00000055610)	ENSDARG00000055374	si:dkey-25e12.3 (ENSDARG00000055365)	stx11b.1 (ENSDARG00000029290)	stx11b.2 (ENSDARG00000042231)	mthfd1l (ENSDARG00000042221) #22	akap12b (ENSDARG00000055678) #23	zbtb2b (ENSDARG00000028086) #24	armt1 (ENSDARG00000055676) #26	esr1 (ENSDARG00000004111) #28	SYNE1 (ENSDARG00000009499) #32	myct1a (ENSDARG00000056125) #33	serac1 (ENSDARG00000056121)	gtf2h5 (ENSDARG00000056099)	ENSDARG00000056092	nrbp1 (ENSDARG00000056089)	CAPN3 (ENSDARG00000043035)	ENSDARG00000091947	churc1 (ENSDARG00000010831)	ttbk2b (ENSDARG00000043026)	slc35f6 (ENSDARG00000016745)
Clupeiformes	ANCESTRAL SPECIES	478															ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401.e #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028
Denticle herring	MODERN SPECIES	5	ENSDCDG00000033804	SMYD2 (ENSDCDG00000033789)	PTPN14 (ENSDCDG00000033759)	kcnk2b (ENSDCDG00000033752)	ENSDCDG00000033750	ENSDCDG00000033749	ctsbb (ENSDCDG00000033743)	fdft1 (ENSDCDG00000033739)	gata4 (ENSDCDG00000033736)	ENSDCDG00000033734	ENSDCDG00000033730	ENSDCDG00000033727	ENSDCDG00000033723	STX11 (ENSDCDG00000033720)	STX11 (ENSDCDG00000033716)	mthfd1l (ENSDCDG00000033671) #22	akap12b (ENSDCDG00000033667) #23	zbtb2b (ENSDCDG00000033665) #24	armt1 (ENSDCDG00000033663) #26	esr1 (ENSDCDG00000033662) #28	ENSDCDG00000033660	myct1a (ENSDCDG00000033570) #33	serac1 (ENSDCDG00000033543)	gtf2h5 (ENSDCDG00000033540)	gja1b (ENSDCDG00000033539)	hsf2 (ENSDCDG00000033538)	serinc1 (ENSDCDG00000033333)	ENSDCDG00000033316	FABP7 (ENSDCDG00000033314)	smpdl3a (ENSDCDG00000033313)	clvs2 (ENSDCDG00000033312)
Euteleosteomorpha	ANCESTRAL SPECIES	81	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Acanthomorphata	ANCESTRAL SPECIES	59	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Euacanthomorphacea	ANCESTRAL SPECIES	13	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Percomorphaceae	ANCESTRAL SPECIES	14	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Percomorphaceae_B	ANCESTRAL SPECIES	18	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Ovalentaria	ANCESTRAL SPECIES	19	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Atherinomorphae	ANCESTRAL SPECIES	18	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Cyprinodontiformes	ANCESTRAL SPECIES	14	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Aplocheiloidei	ANCESTRAL SPECIES	36	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01030000237157	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Mangrove rivulus	MODERN SPECIES	70	slc22a16 (ENSKMAG00000010788)	usta (ENSKMAG00000010734)	sash1a (ENSKMAG00000010598)	ENSKMAG00000010544	stxbp5a (ENSKMAG00000010368)	ENSKMAG00000010294	ENSKMAG00000010275	rab32a (ENSKMAG00000010259)	GRM1 (ENSKMAG00000010203)	fbxo30b (ENSKMAG00000010173)	ENSKMAG00000010151	EPM2A (ENSKMAG00000010132)	UTRN (ENSKMAG00000009723)	STX11 (ENSKMAG00000009616)	stx11b.2 (ENSKMAG00000009601)	mthfd1l (ENSKMAG00000009558) #22	akap12b (ENSKMAG00000009529) #23	zbtb2b (ENSKMAG00000009506) #24	armt1 (ENSKMAG00000009490) #26	esr1 (ENSKMAG00000009365) #28	ENSKMAG00000009198 #32	ENSKMAG00000009164	ENSKMAG00000009084	ENSKMAG00000009021 #32	myct1a (ENSKMAG00000009009) #33	serac1 (ENSKMAG00000008984)	gtf2h5 (ENSKMAG00000008960)	DYNLT1 (ENSKMAG00000008943)	tmem181 (ENSKMAG00000008899)	tulp4a (ENSKMAG00000008810)	mrps10 (ENSKMAG00000008782)
Turquoise killifish	MODERN SPECIES	1613	ENSNFUG00015003592	ENSNFUG00015003577	UTRN (ENSNFUG00015003325)	EPM2A (ENSNFUG00015003246)	ENSNFUG00015003224	fbxo30b (ENSNFUG00015003214)	GRM1 (ENSNFUG00015003205)	RAB32A (ENSNFUG00015003194)	stxbp5a (ENSNFUG00015003084)	SAMD5 (ENSNFUG00015003021)	sash1a (ENSNFUG00015002986)	ENSNFUG00015002974	UST (ENSNFUG00015002971)	ENSNFUG00015002967	stx11b.2 (ENSNFUG00015002963)	mthfd1l (ENSNFUG00015002402) #22	AKAP12B (ENSNFUG00015002267) #23	ZBTB2B (ENSNFUG00015002264) #24	C20H6ORF211 (ENSNFUG00015002258) #26	esr1 (ENSNFUG00015002138) #28	myct1a (ENSNFUG00015001326) #33	serac1 (ENSNFUG00015001244)	gtf2h5 (ENSNFUG00015001222)	ENSNFUG00015001219	DYNLT1 (ENSNFUG00015001216)	tmem181 (ENSNFUG00015001187)	TULP4 (ENSNFUG00015001165)	MRPS10 (ENSNFUG00015001149)	msgn1 (ENSNFUG00015001144)	ENSNFUG00015001138	PPIL6 (ENSNFUG00015001133)
Cyprinodontoidei	ANCESTRAL SPECIES	12	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a.d	ENSGT00950000183204.b.b.a.c	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
NAME_4	ANCESTRAL SPECIES	8	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a.d	ENSGT00950000183204.b.b.a.c	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.gb.a #32	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.gb.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045
Mummichog	MODERN SPECIES	2240	slc22a16 (ENSFHEG00000001017)	usta (ENSFHEG00000001016)	sash1a (ENSFHEG00000000041)	SAMD5 (ENSFHEG00000001005)	stxbp5a (ENSFHEG00000001003)	ENSFHEG00000000999	rab32a (ENSFHEG00000000997)	GRM1 (ENSFHEG00000000995)	fbxo30b (ENSFHEG00000000993)	ALOXE3 (ENSFHEG00000000991)	EPM2A (ENSFHEG00000000986)	ENSFHEG00000000980	UTRN (ENSFHEG00000000967)	STX11 (ENSFHEG00000000963)	stx11b.2 (ENSFHEG00000000962)	mthfd1l (ENSFHEG00000000959) #22	akap12b (ENSFHEG00000000954) #23	zbtb2b (ENSFHEG00000000951) #24	armt1 (ENSFHEG00000000949) #26	esr1 (ENSFHEG00000000933) #28	SYNE1 (ENSFHEG00000023274) #32	ENSFHEG00000023281	ENSFHEG00000023287 #32	myct1a (ENSFHEG00000023295) #33	serac1 (ENSFHEG00000023298)	gtf2h5 (ENSFHEG00000023300)	ENSFHEG00000023302	DYNLT1 (ENSFHEG00000023303)	tmem181 (ENSFHEG00000023306)	tulp4a (ENSFHEG00000023310)	mrps10 (ENSFHEG00000023314)
Sheepshead minnow	MODERN SPECIES	1263												XXYLT1 (ENSCVAG00000010654)	srsf11 (ENSCVAG00000010634)	ENSCVAG00000010621	stx11b.2 (ENSCVAG00000010606)	mthfd1l (ENSCVAG00000010594) #22	akap12b (ENSCVAG00000010576) #23	zbtb2b (ENSCVAG00000010571) #24	armt1 (ENSCVAG00000010566) #26	esr1 (ENSCVAG00000010549) #28
Poeciliinae	ANCESTRAL SPECIES	15	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a.d	ENSGT00950000183204.b.b.a.c	ENSGT00940000156796.c.b.d.a	ENSGT00940000156796.c.b.c	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.hb.b #32	ENSGT00940000174968	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.hb.a #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d
Poecilia	ANCESTRAL SPECIES	9	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a.d	ENSGT00950000183204.b.b.a.c	ENSGT00940000156796.c.b.d.a	ENSGT00940000156796.c.b.c	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.hb.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
NAME_6	ANCESTRAL SPECIES	2	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a.d	ENSGT00950000183204.b.b.a.c	ENSGT00940000156796.c.b.d.a	ENSGT00940000156796.c.b.c	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.hb.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Amazon molly	MODERN SPECIES	253	usta (ENSPFOG00000019609)	sash1a (ENSPFOG00000019608)	SAMD5 (ENSPFOG00000019607)	stxbp5a (ENSPFOG00000019606)	ADGB (ENSPFOG00000019605)	rab32a (ENSPFOG00000024454)	GRM1 (ENSPFOG00000019604)	ENSPFOG00000021853	fbxo30b (ENSPFOG00000019603)	ENSPFOG00000019602	ENSPFOG00000019601	EPM2A (ENSPFOG00000019600)	UTRN (ENSPFOG00000019599)	STX11 (ENSPFOG00000023087)	stx11b.2 (ENSPFOG00000020616)	mthfd1l (ENSPFOG00000019598) #22	akap12b (ENSPFOG00000019597) #23	zbtb2b (ENSPFOG00000019596) #24	armt1 (ENSPFOG00000024726) #26	esr1 (ENSPFOG00000019595) #28	ENSPFOG00000019557 #32	myct1a (ENSPFOG00000019555) #33	serac1 (ENSPFOG00000019552)	gtf2h5 (ENSPFOG00000019551)	DYNLT1 (ENSPFOG00000019550)	tmem181 (ENSPFOG00000019549)	tulp4a (ENSPFOG00000019548)	mrps10 (ENSPFOG00000019547)	si:ch211-51e12.7 (ENSPFOG00000019546)	msgn1 (ENSPFOG00000020615)	GEN1 (ENSPFOG00000019545)
Sailfin molly	MODERN SPECIES	201														ENSPLAG00000022127	stx11b.2 (ENSPLAG00000022141)	mthfd1l (ENSPLAG00000022159) #22	akap12b (ENSPLAG00000022168) #23	zbtb2b (ENSPLAG00000022175) #24	armt1 (ENSPLAG00000022185) #26	esr1 (ENSPLAG00000022270) #28	SYNE1 (ENSPLAG00000000479) #32	myct1a (ENSPLAG00000022692) #33	serac1 (ENSPLAG00000022774)	gtf2h5 (ENSPLAG00000022796)	DYNLT1 (ENSPLAG00000022832)	tmem181 (ENSPLAG00000022884)	tulp4a (ENSPLAG00000022995)	mrps10 (ENSPLAG00000023045)	si:ch211-51e12.7 (ENSPLAG00000023066)	msgn1 (ENSPLAG00000023083)	ENSPLAG00000023090
Guppy	MODERN SPECIES	452	ENSPREG00000002656	rab32a (ENSPREG00000002690)	GRM1 (ENSPREG00000002734)	ENSPREG00000002756	fbxo30b (ENSPREG00000002765)	ENSPREG00000002777	ENSPREG00000002882	ENSPREG00000002928	ENSPREG00000003112	EPM2A (ENSPREG00000003354)	ENSPREG00000003437	ENSPREG00000003820	ENSPREG00000003920	STX11 (ENSPREG00000003955)	stx11b.2 (ENSPREG00000003978)	mthfd1l (ENSPREG00000004002) #22	akap12b (ENSPREG00000004048) #23	zbtb2b (ENSPREG00000004055) #24	armt1 (ENSPREG00000004071) #26	esr1 (ENSPREG00000004110) #28	ENSPREG00000004212 #32	ENSPREG00000004260 #32	ENSPREG00000004284	ENSPREG00000004301	ENSPREG00000004325 #32	myct1a (ENSPREG00000004420) #33	serac1 (ENSPREG00000004433)	gtf2h5 (ENSPREG00000004465)	DYNLT1 (ENSPREG00000004502)	tmem181 (ENSPREG00000004547)	tulp4a (ENSPREG00000004599)
Platyfish	MODERN SPECIES	6	ENSXMAG00000028154	sash1a (ENSXMAG00000007578)	stxbp5a (ENSXMAG00000002948)	ADGB (ENSXMAG00000002972)	rab32a (ENSXMAG00000002977)	GRM1 (ENSXMAG00000002979)	ENSXMAG00000021923	fbxo30b (ENSXMAG00000026610)	ENSXMAG00000002992	ENSXMAG00000027877	EPM2A (ENSXMAG00000003006)	ENSXMAG00000024054	ENSXMAG00000003011	ENSXMAG00000024713	stx11b.2 (ENSXMAG00000020369)	mthfd1l (ENSXMAG00000027669) #22	akap12b (ENSXMAG00000024248) #23	zbtb2b (ENSXMAG00000025504) #24	armt1 (ENSXMAG00000003081) #26	esr1 (ENSXMAG00000003084) #28	ENSXMAG00000003104 #32	ENSXMAG00000027684	ENSXMAG00000024848	ENSXMAG00000028229	ENSXMAG00000024999 #32	myct1a (ENSXMAG00000003189) #33	serac1 (ENSXMAG00000003190)	gtf2h5 (ENSXMAG00000003202)	DYNLT1 (ENSXMAG00000003205)	tmem181 (ENSXMAG00000003212)	tulp4a (ENSXMAG00000003229)
Oryzias	ANCESTRAL SPECIES	19	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00940000159634	ENSGT00530000063929.a.b
Oryzias_b	ANCESTRAL SPECIES	17	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00940000159634
Javanese ricefish	MODERN SPECIES	16	WASF1 (ENSOJAG00000018649)	cdc40 (ENSOJAG00000018674)	METTL24 (ENSOJAG00000018891)	slc22a16 (ENSOJAG00000018897)	usta (ENSOJAG00000018918)	sash1a (ENSOJAG00000018949)	stxbp5a (ENSOJAG00000019190)	ENSOJAG00000019617	ENSOJAG00000019638	rab32a (ENSOJAG00000019668)	GRM1 (ENSOJAG00000019678)	fbxo30b (ENSOJAG00000019698)	EPM2A (ENSOJAG00000019807)	STX11 (ENSOJAG00000020564)	stx11b.2 (ENSOJAG00000020582)	mthfd1l (ENSOJAG00000020662) #22	akap12b (ENSOJAG00000021498) #23	zbtb2b (ENSOJAG00000021508) #24	armt1 (ENSOJAG00000021512) #26	esr1 (ENSOJAG00000021522) #28	myct1a (ENSOJAG00000022970) #33	serac1 (ENSOJAG00000022976)	gtf2h5 (ENSOJAG00000023015)	tmem181 (ENSOJAG00000023025)	tulp4a (ENSOJAG00000023032)	mrps10 (ENSOJAG00000023038)	msgn1 (ENSOJAG00000023041)	ENSOJAG00000023047	ppil6 (ENSOJAG00000023065)	ENSOJAG00000023078	cep57l1 (ENSOJAG00000023083)
Indian medaka	MODERN SPECIES	22	sash1a (ENSOMEG00000008883)	ENSOMEG00000008899	SAMD5 (ENSOMEG00000008916)	ENSOMEG00000008941	stxbp5a (ENSOMEG00000009194)	ENSOMEG00000009275	rab32a (ENSOMEG00000009293)	GRM1 (ENSOMEG00000009316)	fbxo30b (ENSOMEG00000009331)	ENSOMEG00000009663	EPM2A (ENSOMEG00000009763)	ENSOMEG00000000239	ENSOMEG00000009848	STX11 (ENSOMEG00000009861)	stx11b.2 (ENSOMEG00000009870)	mthfd1l (ENSOMEG00000009909) #22	akap12b (ENSOMEG00000009926) #23	zbtb2b (ENSOMEG00000009937) #24	armt1 (ENSOMEG00000009948) #26	esr1 (ENSOMEG00000009991) #28	ENSOMEG00000000242 #32	ENSOMEG00000010036 #32	ENSOMEG00000010057 #32	ENSOMEG00000010113	ENSOMEG00000010130	ENSOMEG00000010151 #32	myct1a (ENSOMEG00000010178) #33	serac1 (ENSOMEG00000010191)	gtf2h5 (ENSOMEG00000010204)	tmem181 (ENSOMEG00000010307)	tulp4a (ENSOMEG00000010431)
Oryzias_a	ANCESTRAL SPECIES	13	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00940000159634	ENSGT00530000063929.a.b
Japanese Medaka HdrR	MODERN SPECIES	16	sash1a (ENSORLG00000014095)	SAMD5 (ENSORLG00000014101)	stxbp5a (ENSORLG00000014135)	ENSORLG00000022274	ENSORLG00000027475	ENSORLG00000014153	rab32a (ENSORLG00000014163)	GRM1 (ENSORLG00000014192)	ENSORLG00000014214	ENSORLG00000014250	EPM2A (ENSORLG00000014264)	ENSORLG00000014338	ENSORLG00000028152	STX11 (ENSORLG00000014345)	stx11b.2 (ENSORLG00000029842)	mthfd1l (ENSORLG00000014449) #22	akap12b (ENSORLG00000027717) #23	zbtb2b (ENSORLG00000014474) #24	armt1 (ENSORLG00000014496) #26	esr1 (ENSORLG00000014514) #28	ENSORLG00000024631 #32	ENSORLG00000028741 #32	ENSORLG00000023520	ENSORLG00000027570	ENSORLG00000028886 #32	myct1a (ENSORLG00000027514) #33	serac1 (ENSORLG00000014762)	gtf2h5 (ENSORLG00000030407)	tmem181 (ENSORLG00000014790)	tulp4a (ENSORLG00000014814)	mrps10 (ENSORLG00000014824)
Chinese medaka	MODERN SPECIES	1302														STX11 (ENSOSIG00000023654)	stx11b.2 (ENSOSIG00000023655)	mthfd1l (ENSOSIG00000023761) #22	akap12b (ENSOSIG00000023845) #23	zbtb2b (ENSOSIG00000023846) #24	armt1 (ENSOSIG00000023848) #26	esr1 (ENSOSIG00000023858) #28	myct1a (ENSOSIG00000023899) #33	serac1 (ENSOSIG00000023923)	gtf2h5 (ENSOSIG00000023925)	tulp4a (ENSOSIG00000023929)	mrps10 (ENSOSIG00000011222)	msgn1 (ENSOSIG00000011224)	ENSOSIG00000011228	ppil6 (ENSOSIG00000011248)	cep57l1 (ENSOSIG00000011256)	ENSOSIG00000011261	PTPN14 (ENSOSIG00000011265)
Ovalentaria_B	ANCESTRAL SPECIES	17	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00940000166257	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Pomacentridae	ANCESTRAL SPECIES	118												ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000174968	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045
Pomacentridae_A	ANCESTRAL SPECIES	120												ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000174968	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045
Amphiprion	ANCESTRAL SPECIES	58	ENSGT00390000013955	ENSGT00940000155144.m	ENSGT00940000155720.c.a	ENSGT00940000163503.A.a.b	ENSGT00390000010349.a.a	ENSGT00930000151053	ENSGT00940000159462.a.b	ENSGT00510000047895	ENSGT00940000155490.a.c.b	ENSGT00940000155490.a.c.a	ENSGT00700000106116.a.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000176900.b	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b
Clown anemonefish	MODERN SPECIES	1456	vipas39 (ENSAOCG00000000042)	ENSAOCG00000002851	brf1b (ENSAOCG00000002847)	btbd6b (ENSAOCG00000022554)	ENSAOCG00000002200	xrcc3 (ENSAOCG00000022521)	ENSAOCG00000022485	PPP4R4 (ENSAOCG00000022475)	ENSAOCG00000022454	ENSAOCG00000022369	C14orf132 (ENSAOCG00000022340)	EPM2A (ENSAOCG00000022336)	UTRN (ENSAOCG00000022254)	STX11 (ENSAOCG00000021549)	stx11b.2 (ENSAOCG00000021525)	mthfd1l (ENSAOCG00000021495) #22	akap12b (ENSAOCG00000021464) #23
Orange clownfish	MODERN SPECIES	2	ENSAPEG00000017423	btbd6b (ENSAPEG00000017405)	ENSAPEG00000017359	brf1b (ENSAPEG00000017279)	xrcc3 (ENSAPEG00000017242)	ENSAPEG00000017231	PPP4R4 (ENSAPEG00000017202)	ENSAPEG00000017107	ENSAPEG00000017012	C14orf132 (ENSAPEG00000017002)	EPM2A (ENSAPEG00000016979)	ENSAPEG00000016926	ENSAPEG00000016760	STX11 (ENSAPEG00000016746)	stx11b.2 (ENSAPEG00000016732)	mthfd1l (ENSAPEG00000016494) #22	akap12b (ENSAPEG00000016463) #23	zbtb2b (ENSAPEG00000016458) #24	armt1 (ENSAPEG00000016451) #26	esr1 (ENSAPEG00000016404) #28	SYNE1 (ENSAPEG00000016174) #32	ENSAPEG00000016154	ENSAPEG00000016104 #32	myct1a (ENSAPEG00000016095) #33	serac1 (ENSAPEG00000016003)	gtf2h5 (ENSAPEG00000015981)	DYNLT1 (ENSAPEG00000015959)	tmem181 (ENSAPEG00000015920)	tulp4a (ENSAPEG00000015839)	mrps10 (ENSAPEG00000015826)	si:ch211-51e12.7 (ENSAPEG00000015817)
Spiny chromis	MODERN SPECIES	319										ENSAPOG00000008166	ENSAPOG00000008397	ENSAPOG00000008439	STX11 (ENSAPOG00000008452)	ENSAPOG00000008468	stx11b.2 (ENSAPOG00000008483)	mthfd1l (ENSAPOG00000008513) #22	akap12b (ENSAPOG00000008535) #23	zbtb2b (ENSAPOG00000008546) #24	armt1 (ENSAPOG00000008559) #26	esr1 (ENSAPOG00000008603) #28	ENSAPOG00000008794 #32	ENSAPOG00000008835	ENSAPOG00000008854	ENSAPOG00000008868	ENSAPOG00000009043 #32
Bicolor damselfish	MODERN SPECIES	365												EPM2A (ENSSPAG00000004934)	UTRN (ENSSPAG00000004442)	ENSSPAG00000004378	stx11b.2 (ENSSPAG00000004367)	mthfd1l (ENSSPAG00000004293) #22	akap12b (ENSSPAG00000004269) #23	zbtb2b (ENSSPAG00000004259) #24	armt1 (ENSSPAG00000004247) #26	esr1 (ENSSPAG00000004227) #28	SYNE1 (ENSSPAG00000004052) #32	ENSSPAG00000004022	ENSSPAG00000003860 #32	myct1a (ENSSPAG00000003828) #33	serac1 (ENSSPAG00000003744)	gtf2h5 (ENSSPAG00000003724)	DYNLT1 (ENSSPAG00000003692)	tmem181 (ENSSPAG00000003649)	tulp4a (ENSSPAG00000003569)	mrps10 (ENSSPAG00000003540)	si:ch211-51e12.7 (ENSSPAG00000003525)
Cichlidae	ANCESTRAL SPECIES	12	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00940000166257	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a.g	ENSGT01050000244948.c.b.a.a.a.h	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Pseudocrenilabrinae	ANCESTRAL SPECIES	6	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a.g	ENSGT01050000244948.c.b.a.a.a.h	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.ab #32	ENSGT00940000174968	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.`b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d
Nile tilapia	MODERN SPECIES	6	WASF1 (ENSONIG00000013440)	cdc40 (ENSONIG00000013431)	METTL24 (ENSONIG00000041033)	slc22a16 (ENSONIG00000013426)	usta (ENSONIG00000013424)	sash1a (ENSONIG00000013418)	stxbp5a (ENSONIG00000013412)	ENSONIG00000027727	rab32 (ENSONIG00000013408)	GRM1 (ENSONIG00000013404)	fbxo30b (ENSONIG00000013403)	ENSONIG00000013402	epm2a (ENSONIG00000032862)	UTRN (ENSONIG00000013377)	stx11b.1 (ENSONIG00000020894)	mthfd1l (ENSONIG00000013373) #22	akap12b (ENSONIG00000013372) #23	zbtb2b (ENSONIG00000038083) #24	armt1 (ENSONIG00000013368) #26	esr1 (ENSONIG00000013354) #28	SYNE1 (ENSONIG00000013332) #32	myct1a (ENSONIG00000037910) #33	serac1 (ENSONIG00000013328)	gtf2h5 (ENSONIG00000029253)	DYNLT1 (ENSONIG00000013325)	tmem181 (ENSONIG00000013318)	ENSONIG00000014666	SLC48A1 (ENSONIG00000034831)	mrps10 (ENSONIG00000030627)	msgn1 (ENSONIG00000013311)	ENSONIG00000013310
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	3	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000166257	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a.g	ENSGT01050000244948.c.b.a.a.a.h	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.ab #32	ENSGT00940000174968	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.`b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d
Lyretail cichlid	MODERN SPECIES	314										ENSNBRG00000017726	EPM2A (ENSNBRG00000017786)	ENSNBRG00000017874	ENSNBRG00000018130	STX11 (ENSNBRG00000018154)	stx11b.1 (ENSNBRG00000018175)	mthfd1l (ENSNBRG00000018231) #22	akap12b (ENSNBRG00000018357) #23	zbtb2b (ENSNBRG00000018368) #24	armt1 (ENSNBRG00000018380) #26	esr1 (ENSNBRG00000018394) #28	ENSNBRG00000018439 #32	ENSNBRG00000018512	ENSNBRG00000018534	ENSNBRG00000018542	ENSNBRG00000018583 #32	ENSNBRG00000018769 #32	myct1a (ENSNBRG00000018802) #33	serac1 (ENSNBRG00000018822)	gtf2h5 (ENSNBRG00000018868)	DYNLT1 (ENSNBRG00000018906)	tmem181 (ENSNBRG00000018942)
Haplochromini	ANCESTRAL SPECIES	13	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000166257	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a.g	ENSGT01050000244948.c.b.a.a.a.h	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.ab #32	ENSGT00940000174968	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.`b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d
Haplochromini_A	ANCESTRAL SPECIES	11	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000166257	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a.g	ENSGT01050000244948.c.b.a.a.a.h	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.ab #32	ENSGT00940000174968	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.`b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d
P. nyererei	MODERN SPECIES	353	slc22a16 (ENSPNYG00000010571)	usta (ENSPNYG00000010636)	sash1a (ENSPNYG00000010673)	SAMD5 (ENSPNYG00000010710)	stxbp5a (ENSPNYG00000010728)	ENSPNYG00000010779	rab32a (ENSPNYG00000010795)	GRM1 (ENSPNYG00000010807)	fbxo30b (ENSPNYG00000010834)	EPM2A (ENSPNYG00000010842)	ENSPNYG00000010938	ENSPNYG00000011273	STX11 (ENSPNYG00000011337)	STX11 (ENSPNYG00000011348)	STX11 (ENSPNYG00000011359)	mthfd1l (ENSPNYG00000011423) #22	akap12b (ENSPNYG00000011556) #23	zbtb2b (ENSPNYG00000011592) #24	armt1 (ENSPNYG00000011607) #26	esr1 (ENSPNYG00000011625) #28	ENSPNYG00000011678 #32	ENSPNYG00000011772	ENSPNYG00000011798	ENSPNYG00000011808	ENSPNYG00000011870 #32	myct1a (ENSPNYG00000012092) #33	serac1 (ENSPNYG00000012107)	gtf2h5 (ENSPNYG00000012156)
Haplochromini_B	ANCESTRAL SPECIES	22	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000166257	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT00970000193911	ENSGT01050000244948.c.b.a.a.a.g	ENSGT01050000244948.c.b.a.a.a.h	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.ab #32	ENSGT00940000174968	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.`b #32	ENSGT00390000011642.e #33	ENSGT00390000003560.g	ENSGT00390000004028
Eastern happy	MODERN SPECIES	6	slc22a16 (ENSACLG00000017143)	usta (ENSACLG00000017162)	sash1a (ENSACLG00000017265)	SAMD5 (ENSACLG00000017310)	stxbp5a (ENSACLG00000017384)	ADGB (ENSACLG00000017918)	rab32a (ENSACLG00000018064)	GRM1 (ENSACLG00000018085)	fbxo30b (ENSACLG00000018132)	ENSACLG00000018144	EPM2A (ENSACLG00000018160)	UTRN (ENSACLG00000018227)	ENSACLG00000018636	STX11 (ENSACLG00000018674)	STX11 (ENSACLG00000018690)	mthfd1l (ENSACLG00000018786) #22	akap12b (ENSACLG00000019192) #23	zbtb2b (ENSACLG00000019230) #24	armt1 (ENSACLG00000019241) #26	esr1 (ENSACLG00000019268) #28	ENSACLG00000019314 #32	ENSACLG00000019451	ENSACLG00000019476	ENSACLG00000019491	ENSACLG00000019517 #32	myct1a (ENSACLG00000019634) #33	serac1 (ENSACLG00000019653)	gtf2h5 (ENSACLG00000019731)	ENSACLG00000019767	ENSACLG00000019773	ENSACLG00000019787
Zebra mbuna	MODERN SPECIES	1097	METTL24 (ENSMZEG00005017451)	slc22a16 (ENSMZEG00005017457)	usta (ENSMZEG00005017463)	sash1a (ENSMZEG00005017473)	stxbp5a (ENSMZEG00005017550)	ENSMZEG00005017559	rab32a (ENSMZEG00005017566)	GRM1 (ENSMZEG00005017567)	fbxo30b (ENSMZEG00005017574)	ENSMZEG00005017578	EPM2A (ENSMZEG00005017585)	UTRN (ENSMZEG00005017614)	ENSMZEG00005017662	STX11 (ENSMZEG00005017670)	STX11 (ENSMZEG00005017672)	mthfd1l (ENSMZEG00005017825) #22	akap12b (ENSMZEG00005017831) #23	zbtb2b (ENSMZEG00005017843) #24	armt1 (ENSMZEG00005017850) #26	esr1 (ENSMZEG00005017853) #28	ENSMZEG00005017866 #32	ENSMZEG00005017877	ENSMZEG00005017881	ENSMZEG00005017888	ENSMZEG00005017903 #32	myct1a (ENSMZEG00005017915) #33	serac1 (ENSMZEG00005017920)	gtf2h5 (ENSMZEG00005017929)	ENSMZEG00005017951	ENSMZEG00005018024	ENSMZEG00005018028
Burton s mouthbrooder	MODERN SPECIES	276	slc22a16 (ENSHBUG00000009442)	usta (ENSHBUG00000009433)	sash1a (ENSHBUG00000009381)	SAMD5 (ENSHBUG00000009347)	stxbp5a (ENSHBUG00000001000)	ADGB (ENSHBUG00000009091)	rab32a (ENSHBUG00000009070)	GRM1 (ENSHBUG00000009056)	fbxo30b (ENSHBUG00000009004)	EPM2A (ENSHBUG00000008998)	UTRN (ENSHBUG00000008972)	ENSHBUG00000008886	STX11 (ENSHBUG00000008847)	STX11 (ENSHBUG00000008836)	STX11 (ENSHBUG00000008829)	mthfd1l (ENSHBUG00000008807) #22	akap12b (ENSHBUG00000008496) #23	zbtb2b (ENSHBUG00000008481) #24	armt1 (ENSHBUG00000008474) #26	esr1 (ENSHBUG00000008433) #28	ENSHBUG00000008315 #32	ENSHBUG00000008161	ENSHBUG00000008126	ENSHBUG00000008083	ENSHBUG00000008066 #32	myct1a (ENSHBUG00000007969) #33	serac1 (ENSHBUG00000007960)	gtf2h5 (ENSHBUG00000007907)
Midas cichlid	MODERN SPECIES	271	SAMD5 (ENSACIG00000006663)	stxbp5a (ENSACIG00000006670)	ENSACIG00000006724	ADGB (ENSACIG00000006737)	rab32a (ENSACIG00000006816)	GRM1 (ENSACIG00000006878)	fbxo30b (ENSACIG00000006905)	ENSACIG00000006930	ENSACIG00000007152	EPM2A (ENSACIG00000007282)	ENSACIG00000007310	ENSACIG00000007561	STX11 (ENSACIG00000007588)	STX11 (ENSACIG00000007602)	STX11 (ENSACIG00000007615)	mthfd1l (ENSACIG00000007646) #22	akap12b (ENSACIG00000007766) #23	zbtb2b (ENSACIG00000007772) #24	armt1 (ENSACIG00000007786) #26	esr1 (ENSACIG00000007819) #28	ENSACIG00000007857 #32	ENSACIG00000007966	ENSACIG00000008010	ENSACIG00000008028 #32	myct1a (ENSACIG00000008099) #33	serac1 (ENSACIG00000008115)	gtf2h5 (ENSACIG00000008156)	DYNLT1 (ENSACIG00000008203)	tmem181 (ENSACIG00000008217)	tulp4a (ENSACIG00000008262)	mrps10 (ENSACIG00000008304)
Percomorphaceae_C	ANCESTRAL SPECIES	19	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00940000166257.k.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Percomorphaceae_D	ANCESTRAL SPECIES	18	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000166257.l	ENSGT00940000156796.c.b	ENSGT00940000166257.k.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Carangaria	ANCESTRAL SPECIES	18	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510	ENSGT00940000156796.c.b	ENSGT00940000166257.k.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.q #32	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.r.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045
Carangaria_A	ANCESTRAL SPECIES	13	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510	ENSGT00940000156796.c.b	ENSGT00940000166257.k.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.r.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Seriola	ANCESTRAL SPECIES	4	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510	ENSGT00940000156796.c.b.h	ENSGT00940000156796.c.b.g.a	ENSGT00940000166257.k.a	ENSGT00940000156796.c.b.g.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.r.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045.a	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Greater amberjack	MODERN SPECIES	10	sash1a (ENSSDUG00000017436)	SAMD5 (ENSSDUG00000017461)	stxbp5a (ENSSDUG00000017476)	ADGB (ENSSDUG00000017547)	rab32a (ENSSDUG00000017602)	GRM1 (ENSSDUG00000017616)	fbxo30b (ENSSDUG00000017657)	ENSSDUG00000017695	ENSSDUG00000017723	ENSSDUG00000017847	ENSSDUG00000018165	EPM2A (ENSSDUG00000018519)	ENSSDUG00000018568	ENSSDUG00000018964	STX11 (ENSSDUG00000019002)	mthfd1l (ENSSDUG00000019009) #22	stx11b.2 (ENSSDUG00000019050)	akap12b (ENSSDUG00000019067) #23	zbtb2b (ENSSDUG00000019081) #24	armt1 (ENSSDUG00000019088) #26	esr1 (ENSSDUG00000019116) #28	SYNE1 (ENSSDUG00000019160) #32	ENSSDUG00000019285	ENSSDUG00000019298 #32	myct1a (ENSSDUG00000019417) #33	serac1 (ENSSDUG00000019422)	gtf2h5 (ENSSDUG00000019485)	DYNLT1 (ENSSDUG00000019503)	tmem181 (ENSSDUG00000019510)	tulp4a (ENSSDUG00000019540)	mrps10 (ENSSDUG00000019559)
Yellowtail amberjack	MODERN SPECIES	2754	ENSSLDG00000008401	ENSSLDG00000008427	rab32a (ENSSLDG00000008449)	RAB32 (ENSSLDG00000008464)	GRM1 (ENSSLDG00000008493)	fbxo30b (ENSSLDG00000008541)	ENSSLDG00000008551	ENSSLDG00000008615	ENSSLDG00000008792	ENSSLDG00000008845	EPM2A (ENSSLDG00000008878)	ENSSLDG00000008915	UTRN (ENSSLDG00000009023)	STX11 (ENSSLDG00000009118)	stx11b.2 (ENSSLDG00000009127)	mthfd1l (ENSSLDG00000009155) #22	akap12b (ENSSLDG00000009208) #23	zbtb2b (ENSSLDG00000009220) #24	armt1 (ENSSLDG00000009229) #26	esr1 (ENSSLDG00000009247) #28
Barramundi perch	MODERN SPECIES	168			usta (ENSLCAG00010008497)	sash1a (ENSLCAG00010008487)	stxbp5a (ENSLCAG00010008051)	ENSLCAG00010007913	ENSLCAG00010007911	rab32a (ENSLCAG00010007898)	GRM1 (ENSLCAG00010007893)	fbxo30b (ENSLCAG00010007888)	ENSLCAG00010007880	ENSLCAG00010007857	EPM2A (ENSLCAG00010007841)	UTRN (ENSLCAG00010006859)	stx11b.2 (ENSLCAG00010006520)	mthfd1l (ENSLCAG00010006481) #22	akap12b (ENSLCAG00010006460) #23	ENSLCAG00010006457 #24	armt1 (ENSLCAG00010006453) #26	esr1 (ENSLCAG00010006104) #28	ENSLCAG00010005971 #32	myct1a (ENSLCAG00010005957) #33	serac1 (ENSLCAG00010005948)	gtf2h5 (ENSLCAG00010005936)	DYNLT1 (ENSLCAG00010005926)	tmem181 (ENSLCAG00010005909)	tulp4a (ENSLCAG00010005899)	mrps10 (ENSLCAG00010005891)	msgn1 (ENSLCAG00010005884)	ppil6 (ENSLCAG00010005844)	cd164 (ENSLCAG00010005832)
Pleuronectoidei	ANCESTRAL SPECIES	11	ENSGT00950000182962.b.b	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b.q #32	ENSGT01030000234944.A	ENSGT00940000176900.b	ENSGT00940000154481.a.b.r.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045
Tongue sole	MODERN SPECIES	17	aldh8a1 (ENSCSEG00000002843)	EPM2A (ENSCSEG00000002851)	ENSCSEG00000002854	fbxo30b (ENSCSEG00000002881)	GRM1 (ENSCSEG00000002884)	rab32a (ENSCSEG00000002895)	ENSCSEG00000002897	stxbp5a (ENSCSEG00000002905)	SAMD5 (ENSCSEG00000002921)	sash1a (ENSCSEG00000002925)	usta (ENSCSEG00000002936)	ENSCSEG00000002943	ENSCSEG00000002948	ENSCSEG00000002959	stx11b.2 (ENSCSEG00000002967)	mthfd1l (ENSCSEG00000002971) #22	akap12b (ENSCSEG00000002989) #23	AFDN (ENSCSEG00000002992)	ENSCSEG00000003011	unc93a (ENSCSEG00000003022)	ENSCSEG00000003031	ENSCSEG00000003048	FAM184A (ENSCSEG00000003049)	MAN1A1 (ENSCSEG00000003060)	tbc1d32 (ENSCSEG00000003068)	hsdl1 (ENSCSEG00000003082)	gja11 (ENSCSEG00000003089)	gja13.1 (ENSCSEG00000003118)	gja12.1 (ENSCSEG00000003123)	si:ch73-111k22.2 (ENSCSEG00000003128)	ENSCSEG00000003133
Turbot	MODERN SPECIES	12	WASF1 (ENSSMAG00000014471)	ENSSMAG00000014514	METTL24 (ENSSMAG00000014557)	slc22a16 (ENSSMAG00000014576)	usta (ENSSMAG00000014602)	sash1a (ENSSMAG00000014648)	stxbp5a (ENSSMAG00000014794)	ENSSMAG00000021948	rab32a (ENSSMAG00000015000)	GRM1 (ENSSMAG00000015010)	ENSSMAG00000015033	ENSSMAG00000015048	ENSSMAG00000015167	EPM2A (ENSSMAG00000038108)	stx11b.1 (ENSSMAG00000016087)	mthfd1l (ENSSMAG00000016092) #22	akap12b (ENSSMAG00000016179) #23	zbtb2b (ENSSMAG00000033767) #24	armt1 (ENSSMAG00000035125) #26	esr1 (ENSSMAG00000016212) #28	myct1a (ENSSMAG00000024885) #33	serac1 (ENSSMAG00000016481)	gtf2h5 (ENSSMAG00000023490)	DYNLT1 (ENSSMAG00000024337)	tmem181 (ENSSMAG00000016523)	tulp4a (ENSSMAG00000016535)	mrps10 (ENSSMAG00000016563)	si:ch211-51e12.7 (ENSSMAG00000016566)	msgn1 (ENSSMAG00000016578)	ENSSMAG00000016588	PPIL6 (ENSSMAG00000016607)
Anabantaria	ANCESTRAL SPECIES	20	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00940000159634
Zig-zag eel	MODERN SPECIES	16	WASF1 (ENSMAMG00000020849)	ENSMAMG00000020863	METTL24 (ENSMAMG00000020880)	slc22a16 (ENSMAMG00000020884)	usta (ENSMAMG00000020887)	sash1a (ENSMAMG00000020891)	stxbp5a (ENSMAMG00000020911)	ENSMAMG00000027439	rab32a (ENSMAMG00000020933)	GRM1 (ENSMAMG00000020935)	ENSMAMG00000020941	EPM2A (ENSMAMG00000025795)	ENSMAMG00000020945	ENSMAMG00000020956	stx11b.1 (ENSMAMG00000021171)	ENSMAMG00000021176 #22	ENSMAMG00000021184 #23	ENSMAMG00000021194	ENSMAMG00000021201	FAM184A (ENSMAMG00000021207)	ENSMAMG00000021215	tbc1d32 (ENSMAMG00000021226)	hsdl1 (ENSMAMG00000025872)	gja11 (ENSMAMG00000021234)	ENSMAMG00000021236	gja12.1 (ENSMAMG00000021244)	si:ch73-111k22.2 (ENSMAMG00000021247)	ENSMAMG00000026609	ttc13 (ENSMAMG00000021252)	arv1 (ENSMAMG00000028166)	FAM89A (ENSMAMG00000021255)
Anabantoidei	ANCESTRAL SPECIES	15	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00940000159634
Siamese fighting fish	MODERN SPECIES	13	ccdc167 (ENSBSLG00000023460)	WASF1 (ENSBSLG00000023477)	cdc40 (ENSBSLG00000023520)	METTL24 (ENSBSLG00000023860)	slc22a16 (ENSBSLG00000023881)	usta (ENSBSLG00000023914)	SAMD5 (ENSBSLG00000023926)	stxbp5a (ENSBSLG00000023986)	ENSBSLG00000024306	rab32a (ENSBSLG00000024313)	GRM1 (ENSBSLG00000024316)	fbxo30b (ENSBSLG00000024318)	EPM2A (ENSBSLG00000024319)	UTRN (ENSBSLG00000024333)	stx11b.2 (ENSBSLG00000024397)	mthfd1l (ENSBSLG00000024569) #22	zbtb2b (ENSBSLG00000025174) #24	armt1 (ENSBSLG00000025176) #26	esr1 (ENSBSLG00000025188) #28	myct1a (ENSBSLG00000025380) #33	serac1 (ENSBSLG00000025467)	gtf2h5 (ENSBSLG00000025637)	DYNLT1 (ENSBSLG00000004931)	tulp4a (ENSBSLG00000005164)	mrps10 (ENSBSLG00000005219)	si:ch211-51e12.7 (ENSBSLG00000005244)	msgn1 (ENSBSLG00000005269)	ENSBSLG00000005284	ppil6 (ENSBSLG00000005364)	cd164 (ENSBSLG00000005429)	cep57l1 (ENSBSLG00000005450)
Climbing perch	MODERN SPECIES	15	WASF1 (ENSATEG00000011217)	ENSATEG00000011286	METTL24 (ENSATEG00000011349)	slc22a16 (ENSATEG00000011358)	usta (ENSATEG00000011404)	sash1a (ENSATEG00000011453)	stxbp5a (ENSATEG00000011503)	ENSATEG00000011619	rab32a (ENSATEG00000028293)	GRM1 (ENSATEG00000011648)	ENSATEG00000011683	EPM2A (ENSATEG00000028583)	ENSATEG00000011751	STX11 (ENSATEG00000012325)	stx11b.1 (ENSATEG00000012344)	mthfd1l (ENSATEG00000012355) #22	akap12b (ENSATEG00000012404) #23	zbtb2b (ENSATEG00000026691) #24	armt1 (ENSATEG00000026480) #26	esr1 (ENSATEG00000012427) #28	myct1a (ENSATEG00000012760) #33	serac1 (ENSATEG00000012777)	gtf2h5 (ENSATEG00000028411)	DYNLT1 (ENSATEG00000029921)	tmem181 (ENSATEG00000012888)	tulp4a (ENSATEG00000012950)	mrps10 (ENSATEG00000029736)	msgn1 (ENSATEG00000012980)	PPIL6 (ENSATEG00000013027)	cd164 (ENSATEG00000013091)	cep57l1 (ENSATEG00000013115)
Eupercaria	ANCESTRAL SPECIES	16	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Tetraodontidae	ANCESTRAL SPECIES	15	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00940000168402	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904.q	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000173513.b	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00390000002032
Tetraodon	MODERN SPECIES	5	slc22a16 (ENSTNIG00000012248)	usta (ENSTNIG00000012249)	sash1a (ENSTNIG00000012250)	ENSTNIG00000012251	stxbp5a (ENSTNIG00000012252)	ENSTNIG00000012253	rab32a (ENSTNIG00000012254)	GRM1 (ENSTNIG00000012255)	fbxo30b (ENSTNIG00000012256)	ENSTNIG00000012257	EPM2A (ENSTNIG00000012258)	ENSTNIG00000000487	UTRN (ENSTNIG00000012259)	STX11 (ENSTNIG00000012260)	stx11b.2 (ENSTNIG00000012261)	mthfd1l (ENSTNIG00000012262) #22	akap12b (ENSTNIG00000000253) #23	zbtb2b (ENSTNIG00000012263) #24	armt1 (ENSTNIG00000001188) #26	esr1 (ENSTNIG00000012264) #28	SYNE1 (ENSTNIG00000012265) #32	serac1 (ENSTNIG00000012266)	gtf2h5 (ENSTNIG00000012267)	DYNLT1 (ENSTNIG00000012268)	tmem181 (ENSTNIG00000012269)	tulp4a (ENSTNIG00000012270)	mrps10 (ENSTNIG00000012271)	msgn1 (ENSTNIG00000001511)	ENSTNIG00000012272	L3HYPDH (ENSTNIG00000012273)	ppil6 (ENSTNIG00000012274)
Fugu	MODERN SPECIES	7	ENSTRUG00000029537	sash1a (ENSTRUG00000018392)	stxbp5a (ENSTRUG00000018383)	ENSTRUG00000029824	ENSTRUG00000020758	rab32 (ENSTRUG00000009023)	GRM1 (ENSTRUG00000018354)	fbxo30b (ENSTRUG00000018349)	ENSTRUG00000018336	ENSTRUG00000022472	ENSTRUG00000032195	EPM2A (ENSTRUG00000018322)	ENSTRUG00000018327	UTRN (ENSTRUG00000018246)	stx11b.2 (ENSTRUG00000002583)	mthfd1l (ENSTRUG00000024369) #22	akap12b (ENSTRUG00000018243) #23	zbtb2b (ENSTRUG00000018234) #24	armt1 (ENSTRUG00000018219) #26	esr1 (ENSTRUG00000025100) #28	ENSTRUG00000028350	ENSTRUG00000029565	ENSTRUG00000033396	myct1a (ENSTRUG00000018174) #33	serac1 (ENSTRUG00000018150)	gtf2h5 (ENSTRUG00000023578)	THBS1 (ENSTRUG00000018123)	gpr176 (ENSTRUG00000018121)	katnbl1 (ENSTRUG00000018118)	emc7b (ENSTRUG00000032743)	chrm5b (ENSTRUG00000018108)
Eupecaria_A	ANCESTRAL SPECIES	16	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510.cb	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Ballan wrasse	MODERN SPECIES	52	slc22a16 (ENSLBEG00000020206)	usta (ENSLBEG00000020175)	sash1a (ENSLBEG00000020116)	SAMD5 (ENSLBEG00000020091)	stxbp5a (ENSLBEG00000019990)	ENSLBEG00000019941	rab32a (ENSLBEG00000019925)	GRM1 (ENSLBEG00000019880)	fbxo30b (ENSLBEG00000019852)	ENSLBEG00000019579	EPM2A (ENSLBEG00000019535)	ENSLBEG00000019505	ENSLBEG00000019366	ENSLBEG00000019303	STX11 (ENSLBEG00000019267)	mthfd1l (ENSLBEG00000019249) #22	akap12b (ENSLBEG00000019227) #23	zbtb2b (ENSLBEG00000019211) #24	armt1 (ENSLBEG00000019163) #26	esr1 (ENSLBEG00000016616) #28	SYNE1 (ENSLBEG00000015496) #32	ENSLBEG00000015458	ENSLBEG00000015270 #32	myct1a (ENSLBEG00000015172) #33	serac1 (ENSLBEG00000015104)	gtf2h5 (ENSLBEG00000015068)	DYNLT1 (ENSLBEG00000014968)	tmem181 (ENSLBEG00000014923)	tulp4a (ENSLBEG00000014805)	mrps10 (ENSLBEG00000014754)	si:ch211-51e12.7 (ENSLBEG00000014729)
Eupecaria_B	ANCESTRAL SPECIES	16	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510.cb	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Eupecaria_C	ANCESTRAL SPECIES	16	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510.cb	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	11	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510.cb	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
European seabass	MODERN SPECIES	7	METTL24 (ENSDLAG00005011337)	slc22a16 (ENSDLAG00005011300)	usta (ENSDLAG00005031821)	SAMD5 (ENSDLAG00005031978)	stxbp5a (ENSDLAG00005011000)	ADGB (ENSDLAG00005010905)	rab32a (ENSDLAG00005032078)	GRM1 (ENSDLAG00005010860)	ENSDLAG00005010852	ENSDLAG00005010745	ENSDLAG00005010595	EPM2A (ENSDLAG00005010581)	ENSDLAG00005005786	STX11 (ENSDLAG00005026954)	stx11b.1 (ENSDLAG00005028721)	mthfd1l (ENSDLAG00005001497) #22	akap12b (ENSDLAG00005001190) #23	zbtb2b (ENSDLAG00005026784) #24	armt1 (ENSDLAG00005032262) #26	esr1 (ENSDLAG00005001062) #28	serac1 (ENSDLAG00005000296)	ENSDLAG00005000565 #32	DYNLT1 (ENSDLAG00005000232)	tmem181 (ENSDLAG00005000181)	tulp4a (ENSDLAG00005020512)	mrps10 (ENSDLAG00005020502)	ENSDLAG00005032650	ENSDLAG00005030866	PPIL6 (ENSDLAG00005026853)	cep57l1 (ENSDLAG00005034480)	sesn1 (ENSDLAG00005020385)
Large yellow croaker	MODERN SPECIES	482	cdc40 (ENSLCRG00005002649)	METTL24 (ENSLCRG00005002626)	slc22a16 (ENSLCRG00005002623)	usta (ENSLCRG00005002616)	sash1a (ENSLCRG00005002588)	stxbp5a (ENSLCRG00005000652)	ENSLCRG00005016102	rab32a (ENSLCRG00005016101)	GRM1 (ENSLCRG00005016100)	fbxo30b (ENSLCRG00005016098)	ENSLCRG00005016097	ENSLCRG00005016094	EPM2A (ENSLCRG00005016092)	UTRN (ENSLCRG00005011040)	stx11b.2 (ENSLCRG00005010998)	mthfd1l (ENSLCRG00005008614) #22	akap12b (ENSLCRG00005008594) #23	zbtb2b (ENSLCRG00005008592) #24	armt1 (ENSLCRG00005008591) #26	esr1 (ENSLCRG00005008511) #28	myct1a (ENSLCRG00005008419) #33	serac1 (ENSLCRG00005007759)	gtf2h5 (ENSLCRG00005007754)	DYNLT1 (ENSLCRG00005007748)	tmem181 (ENSLCRG00005007747)	tulp4a (ENSLCRG00005007746)	mrps10 (ENSLCRG00005007745)	si:ch211-51e12.7 (ENSLCRG00005007743)	msgn1 (ENSLCRG00005007741)	GEN1 (ENSLCRG00005007739)	ppil6 (ENSLCRG00005007738)
Gilthead seabream	MODERN SPECIES	14	stxbp5a (ENSSAUG00010018038)	ENSSAUG00010018008	rab32a (ENSSAUG00010018006)	GRM1 (ENSSAUG00010018003)	fbxo30b (ENSSAUG00010018000)	ENSSAUG00010017995	ENSSAUG00010017984	ENSSAUG00010017927	ENSSAUG00010017890	ENSSAUG00010017886	ENSSAUG00010017885	EPM2A (ENSSAUG00010017884)	UTRN (ENSSAUG00010016677)	STX11 (ENSSAUG00010016630)	stx11b.2 (ENSSAUG00010016628)	mthfd1l (ENSSAUG00010011834) #22	akap12b (ENSSAUG00010011727) #23	zbtb2b (ENSSAUG00010011724) #24	armt1 (ENSSAUG00010011723) #26	esr1 (ENSSAUG00010010150) #28	myct1a (ENSSAUG00010009891) #33	serac1 (ENSSAUG00010009687)	gtf2h5 (ENSSAUG00010009668)	DYNLT1 (ENSSAUG00010009659)	tmem181 (ENSSAUG00010009650)	tulp4a (ENSSAUG00010009631)	mrps10 (ENSSAUG00010009627)	si:ch211-51e12.7 (ENSSAUG00010009624)	msgn1 (ENSSAUG00010009621)	ENSSAUG00010009615	ppil6 (ENSSAUG00010009611)
Perciformes	ANCESTRAL SPECIES	14	ENSGT00530000063583.b	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510.cb	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Perciformes_a	ANCESTRAL SPECIES	15	ENSGT00950000182962.b.b	ENSGT00530000063583.b	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000161510.cb	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01030000234809	ENSGT00530000063712.a.b	ENSGT00940000159266
Pike perch	MODERN SPECIES	4	WASF1 (ENSSLUG00000023666)	cdc40 (ENSSLUG00000023514)	slc22a16 (ENSSLUG00000023486)	usta (ENSSLUG00000023461)	sash1a (ENSSLUG00000023425)	stxbp5a (ENSSLUG00000023198)	ENSSLUG00000023174	rab32a (ENSSLUG00000023170)	GRM1 (ENSSLUG00000023167)	fbxo30b (ENSSLUG00000023162)	ENSSLUG00000023146	ENSSLUG00000023109	EPM2A (ENSSLUG00000023100)	UTRN (ENSSLUG00000011798)	stx11b.2 (ENSSLUG00000011171)	mthfd1l (ENSSLUG00000006391) #22	akap12b (ENSSLUG00000006112) #23	zbtb2b (ENSSLUG00000006099) #24	armt1 (ENSSLUG00000006091) #26	esr1 (ENSSLUG00000004654) #28	SYNE1 (ENSSLUG00000003875) #32	myct1a (ENSSLUG00000003747) #33	serac1 (ENSSLUG00000003411)	gtf2h5 (ENSSLUG00000003359)	DYNLT1 (ENSSLUG00000007839)	tmem181 (ENSSLUG00000007791)	tulp4a (ENSSLUG00000007705)	mrps10 (ENSSLUG00000007674)	si:ch211-51e12.7 (ENSSLUG00000007671)	msgn1 (ENSSLUG00000007661)	ppil6 (ENSSLUG00000007643)
Channel bull blenny	MODERN SPECIES	16	usta (ENSCGOG00000015442)	sash1a (ENSCGOG00000015411)	ENSCGOG00000015405	stxbp5a (ENSCGOG00000013718)	ENSCGOG00000013645	rab32a (ENSCGOG00000013643)	GRM1 (ENSCGOG00000013134)	fbxo30b (ENSCGOG00000013102)	ENSCGOG00000013063	ENSCGOG00000012905	ENSCGOG00000012764	EPM2A (ENSCGOG00000012758)	ENSCGOG00000012757	UTRN (ENSCGOG00000012219)	stx11b.2 (ENSCGOG00000012171)	mthfd1l (ENSCGOG00000007998) #22	akap12b (ENSCGOG00000007875) #23	zbtb2b (ENSCGOG00000007874) #24	armt1 (ENSCGOG00000007873) #26	esr1 (ENSCGOG00000006892) #28	ENSCGOG00000006654 #32	myct1a (ENSCGOG00000006652) #33	serac1 (ENSCGOG00000006464)	gtf2h5 (ENSCGOG00000006453)	DYNLT1 (ENSCGOG00000006446)	tmem181 (ENSCGOG00000006339)	tulp4a (ENSCGOG00000006117)	mrps10 (ENSCGOG00000006107)	si:ch211-51e12.7 (ENSCGOG00000006102)	msgn1 (ENSCGOG00000006099)	ENSCGOG00000006080
Cottioidei	ANCESTRAL SPECIES	25														ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00940000159634
Lumpfish	MODERN SPECIES	16	si:dkey-174m14.3 (ENSCLMG00005019040)	rdh14b (ENSCLMG00005019045)	ENSCLMG00005011942	rngtt (ENSCLMG00005011949)	cnr1 (ENSCLMG00005012633)	akirin2 (ENSCLMG00005012634)	ENSCLMG00005012635	ENSCLMG00005012652	ENSCLMG00005012696	ENSCLMG00005012731	EPM2A (ENSCLMG00005013024)	CEBPZ (ENSCLMG00005013025)	ndufaf7 (ENSCLMG00005013026)	UTRN (ENSCLMG00005013030)	stx11b.2 (ENSCLMG00005013050)	mthfd1l (ENSCLMG00005013064) #22	akap12b (ENSCLMG00005015366) #23	zbtb2b (ENSCLMG00005015367) #24	armt1 (ENSCLMG00005015368) #26	esr1 (ENSCLMG00005015382) #28	ENSCLMG00005016413 #32	ENSCLMG00005016455	ENSCLMG00005016456	ENSCLMG00005016461 #32	myct1a (ENSCLMG00005016478) #33	serac1 (ENSCLMG00005016480)	gtf2h5 (ENSCLMG00005016553)	DYNLT1 (ENSCLMG00005016555)	tmem181 (ENSCLMG00005016558)	tulp4a (ENSCLMG00005016567)	mrps10 (ENSCLMG00005016571)
Stickleback	MODERN SPECIES	18	nt5c1ba (ENSGACG00000008368)	syt14b (ENSGACG00000008395)	extl3 (ENSGACG00000008404)	NDUFB1 (ENSGACG00000008410)	cpsf2 (ENSGACG00000008418)	SLC24A4 (ENSGACG00000008433)	ENSGACG00000008446	tmem121ab (ENSGACG00000008452)	FUT8 (ENSGACG00000008454)	gphnb (ENSGACG00000008491)	pals1b (ENSGACG00000008518)	atp6v1d (ENSGACG00000008522)	eif2s1b (ENSGACG00000008569)	UTRN (ENSGACG00000008623)	stx11b.2 (ENSGACG00000008654)	mthfd1l (ENSGACG00000008664) #22	ENSGACG00000008690	zbtb2b (ENSGACG00000008691) #24	armt1 (ENSGACG00000008692) #26	esr1 (ENSGACG00000008711) #28	SYNE1 (ENSGACG00000008721) #32	myct1a (ENSGACG00000008796) #33	serac1 (ENSGACG00000008797)	gtf2h5 (ENSGACG00000008827)	tmem181 (ENSGACG00000008833)	tulp4a (ENSGACG00000008851)	mrps10 (ENSGACG00000008859)	msgn1 (ENSGACG00000008864)	msgn1 (ENSGACG00000008865)	GEN1 (ENSGACG00000008868)	ppil6 (ENSGACG00000008871)
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	68	rab32a (ENSHCOG00000002913)	ENSHCOG00000002906	GRM1 (ENSHCOG00000000081)	fbxo30b (ENSHCOG00000002879)	ENSHCOG00000021080	ENSHCOG00000020545	ENSHCOG00000020529	ENSHCOG00000020437	EPM2A (ENSHCOG00000020412)	ENSHCOG00000020396	ENSHCOG00000020371	ENSHCOG00000020306	ENSHCOG00000020280	STX11 (ENSHCOG00000020270)	stx11b.2 (ENSHCOG00000020247)	mthfd1l (ENSHCOG00000020231) #22	ENSHCOG00000020197 #22	akap12b (ENSHCOG00000020187) #23	arf6a (ENSHCOG00000020174)	ENSHCOG00000000537	si:dkey-174m14.3 (ENSHCOG00000020131)	rdh14b (ENSHCOG00000020123)	ENSHCOG00000020121
Tiger tail seahorse	MODERN SPECIES	68	ENSHCOG00000002906	GRM1 (ENSHCOG00000000081)	fbxo30b (ENSHCOG00000002879)	ENSHCOG00000021080	ENSHCOG00000020545	ENSHCOG00000020529	ENSHCOG00000020437	EPM2A (ENSHCOG00000020412)	ENSHCOG00000020396	ENSHCOG00000020371	ENSHCOG00000020306	ENSHCOG00000020280	STX11 (ENSHCOG00000020270)	stx11b.2 (ENSHCOG00000020247)	mthfd1l (ENSHCOG00000020231) #22	ENSHCOG00000020197 #22	akap12b (ENSHCOG00000020187) #23	arf6a (ENSHCOG00000020174)	ENSHCOG00000000537	si:dkey-174m14.3 (ENSHCOG00000020131)	rdh14b (ENSHCOG00000020123)	ENSHCOG00000020121
Pinecone sodierfish	MODERN SPECIES	16	cdc40 (ENSMMDG00005015616)	METTL24 (ENSMMDG00005015612)	slc22a16 (ENSMMDG00005015609)	usta (ENSMMDG00005015608)	sash1a (ENSMMDG00005015596)	SAMD5 (ENSMMDG00005015592)	stxbp5a (ENSMMDG00005015583)	ENSMMDG00005015572	rab32a (ENSMMDG00005015570)	GRM1 (ENSMMDG00005014767)	fbxo30b (ENSMMDG00005014749)	EPM2A (ENSMMDG00005014746)	UTRN (ENSMMDG00005013388)	STX11 (ENSMMDG00005013337)	stx11b.2 (ENSMMDG00005013330)	mthfd1l (ENSMMDG00005005569) #22	akap12b (ENSMMDG00005005489) #23	zbtb2b (ENSMMDG00005005486) #24	armt1 (ENSMMDG00005005485) #26	esr1 (ENSMMDG00005004992) #28	SYNE1 (ENSMMDG00005004531) #32	myct1a (ENSMMDG00005004474) #33	serac1 (ENSMMDG00005002910)	gtf2h5 (ENSMMDG00005002845)	DYNLT1 (ENSMMDG00005002836)	tmem181 (ENSMMDG00005002818)	tulp4a (ENSMMDG00005002800)	mrps10 (ENSMMDG00005002796)	si:ch211-51e12.7 (ENSMMDG00005002788)	msgn1 (ENSMMDG00005002764)	ENSMMDG00005002750
Cod	MODERN SPECIES	13	ENSGMOG00000033727	ENSGMOG00000023453	ENSGMOG00000030366	ENSGMOG00000032431	ENSGMOG00000024992	ENSGMOG00000034195	ENSGMOG00000031640	ENSGMOG00000027968	ENSGMOG00000024133	ENSGMOG00000005529	ENSGMOG00000005496	ENSGMOG00000008997	ENSGMOG00000008976	ENSGMOG00000026189	stx11b.1 (ENSGMOG00000034977)	mthfd1l (ENSGMOG00000007486) #22	akap12b (ENSGMOG00000023204) #23	zbtb2b (ENSGMOG00000030464) #24	armt1 (ENSGMOG00000022447) #26	esr1 (ENSGMOG00000014898) #28	ENSGMOG00000036568 #32	myct1a (ENSGMOG00000031525) #33	serac1 (ENSGMOG00000015267)	ENSGMOG00000028299	ENSGMOG00000013202	ENSGMOG00000036692	ENSGMOG00000033243	ENSGMOG00000013003	ENSGMOG00000013023	ENSGMOG00000018629	ENSGMOG00000007087
Protacanthopterygii	ANCESTRAL SPECIES	22	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133 #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01060000249589	ENSGT00530000063712.a.b	ENSGT00940000159266
Salmoninae	ANCESTRAL SPECIES	56	ENSGT00530000063408.A.i	ENSGT00940000156778.l.a	ENSGT00510000048701.a.a.b.a	ENSGT00940000155490.a.c.a.d	ENSGT00940000155490.a.c.b.e	ENSGT00510000048701.a.a.a	ENSGT00950000182906.b.a.i.b.b	ENSGT00940000162477.c.e.a	ENSGT01030000234595.A.b.a.b.b.a.a	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b.s	ENSGT00940000156796.c.b.t	ENSGT00390000010101.a	ENSGT00940000153467.a.a.i	ENSGT01050000244948.c.b.a.a.a.j	ENSGT00940000157477 #22	ENSGT00730000111244.a.b.c #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133.f #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01060000249589	ENSGT00530000063712.a.b	ENSGT00940000159266
Salmoninae_a	ANCESTRAL SPECIES	30	ENSGT00530000063408.A.i	ENSGT00940000156778.l.a	ENSGT00510000048701.a.a.b.a	ENSGT00940000155490.a.c.a.d	ENSGT00940000155490.a.c.b.e	ENSGT00950000182906.b.a.i.b.b	ENSGT00940000162477.c.e.a	ENSGT01030000234595.A.b.a.b.b.a.a	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b.s	ENSGT00940000166257	ENSGT00940000156796.c.b.t	ENSGT00390000010101.a	ENSGT00940000153467.a.a.i	ENSGT01050000244948.c.b.a.a.a.j	ENSGT00940000157477 #22	ENSGT00730000111244.a.b.c #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133.f #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01060000249589	ENSGT00530000063712.a.b	ENSGT00940000159266
Oncorhynchus	ANCESTRAL SPECIES	30	ENSGT00530000063408.A.i	ENSGT00940000156778.l.a	ENSGT00510000048701.a.a.b.a	ENSGT00940000155490.a.c.a.d	ENSGT00940000155490.a.c.b.e	ENSGT00950000182906.b.a.i.b.b	ENSGT00940000162477.c.e.a	ENSGT01030000234595.A.b.a.b.b.a.a	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b.s	ENSGT00940000166257	ENSGT00940000156796.c.b.t	ENSGT00390000010101.a	ENSGT00940000153467.a.a.i	ENSGT01050000244948.c.b.a.a.a.j	ENSGT00940000157477 #22	ENSGT00730000111244.a.b.c #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133.f #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01060000249589	ENSGT00530000063712.a.b	ENSGT00940000159266
Oncorhynchus_a	ANCESTRAL SPECIES	35	ENSGT00530000063408.A.i	ENSGT00940000156778.l.a	ENSGT00510000048701.a.a.b.a	ENSGT00940000155490.a.c.a.d	ENSGT00940000155490.a.c.b.e	ENSGT00950000182906.b.a.i.b.b	ENSGT00940000162477.c.e.a	ENSGT01030000234595.A.b.a.b.b.a.a	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b.s	ENSGT00940000166257	ENSGT00940000156796.c.b.t	ENSGT00390000010101.a	ENSGT00940000153467.a.a.i	ENSGT01050000244948.c.b.a.a.a.j	ENSGT00940000157477 #22	ENSGT00730000111244.a.b.c #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133.f #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01060000249589	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00550000074816.A.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	9	ENSOTSG00005033298	ENSOTSG00005033300	ENSOTSG00005033322	SAMD5 (ENSOTSG00005033329)	ENSOTSG00005033330	ENSOTSG00005033331	stxbp5a (ENSOTSG00005033341)	rab32a (ENSOTSG00005033437)	GRM1 (ENSOTSG00005033440)	fbxo30b (ENSOTSG00005033893)	ENSOTSG00005033894	ENSOTSG00005033897	EPM2A (ENSOTSG00005033917)	UTRN (ENSOTSG00005033925)	STX11 (ENSOTSG00005033951)	mthfd1l (ENSOTSG00005033952) #22	akap12b (ENSOTSG00005034396) #23	zbtb2b (ENSOTSG00005034398) #24	armt1 (ENSOTSG00005034399) #26	esr1 (ENSOTSG00005034433) #28	ENSOTSG00005022402 #32	myct1a (ENSOTSG00005022613) #33	serac1 (ENSOTSG00005022617)	DYNLT1 (ENSOTSG00005023897)	tmem181 (ENSOTSG00005023901)	tulp4a (ENSOTSG00005023906)	mrps10 (ENSOTSG00005023953)	msgn1 (ENSOTSG00005023955)	ENSOTSG00005023956	usta (ENSOTSG00005023957)	ENSOTSG00005023958
Chinook salmon	MODERN SPECIES	9	SMYD2 (ENSOTSG00005028768)	ENSOTSG00005028827	SAMD5 (ENSOTSG00005028828)	ASB2 (ENSOTSG00005028830)	ENSOTSG00005028835	ENSOTSG00005028836	stxbp5a (ENSOTSG00005028844)	rab32a (ENSOTSG00005029580)	GRM1 (ENSOTSG00005029581)	fbxo30b (ENSOTSG00005030146)	ENSOTSG00005030149	ENSOTSG00005030322	EPM2A (ENSOTSG00005030344)	UTRN (ENSOTSG00005030358)	STX11 (ENSOTSG00005030377)	mthfd1l (ENSOTSG00005030384) #22	akap12b (ENSOTSG00005030799) #23	zbtb2b (ENSOTSG00005030802) #24	armt1 (ENSOTSG00005030803) #26	esr1 (ENSOTSG00005030805) #28	ENSOTSG00005030810 #32	myct1a (ENSOTSG00005030899) #33	serac1 (ENSOTSG00005030905)	DYNLT1 (ENSOTSG00005032944)	tmem181 (ENSOTSG00005032951)	tulp4a (ENSOTSG00005032962)	mrps10 (ENSOTSG00005032965)	ENSOTSG00005032966	msgn1 (ENSOTSG00005032968)	ENSOTSG00005032971	si:dkey-119f1.1 (ENSOTSG00005032982)
Coho salmon	MODERN SPECIES	13	slc22a16 (ENSOKIG00005030991)	usta (ENSOKIG00005030963)	ENSOKIG00005030957	sash1a (ENSOKIG00005030888)	SAMD5 (ENSOKIG00005030856)	ASB2 (ENSOKIG00005030828)	stxbp5a (ENSOKIG00005028727)	rab32a (ENSOKIG00005028591)	GRM1 (ENSOKIG00005028097)	fbxo30b (ENSOKIG00005028067)	ENSOKIG00005027915	ENSOKIG00005027808	EPM2A (ENSOKIG00005027789)	UTRN (ENSOKIG00005014362)	stx11b.2 (ENSOKIG00005013860)	mthfd1l (ENSOKIG00005013451) #22	akap12b (ENSOKIG00005013372) #23	zbtb2b (ENSOKIG00005013365) #24	armt1 (ENSOKIG00005013358) #26	esr1 (ENSOKIG00005013214) #28	ENSOKIG00005013197	SYNE1 (ENSOKIG00005007393) #32	myct1a (ENSOKIG00005007061) #33	serac1 (ENSOKIG00005006345)	DYNLT1 (ENSOKIG00005006288)	tmem181 (ENSOKIG00005006185)	tulp4a (ENSOKIG00005006012)	mrps10 (ENSOKIG00005021747)	msgn1 (ENSOKIG00005021735)	ENSOKIG00005021728	si:dkey-119f1.1 (ENSOKIG00005021390)
Rainbow trout	MODERN SPECIES	25	SAMD5 (ENSOMYG00000013126)	ENSOMYG00000056187	ENSOMYG00000013142	ENSOMYG00000055059	stxbp5a (ENSOMYG00000013375)	ENSOMYG00000077362	rab32a (ENSOMYG00000015605)	GRM1 (ENSOMYG00000015671)	ENSOMYG00000061782	ENSOMYG00000016276	ENSOMYG00000016284	ENSOMYG00000016297	ENSOMYG00000048780	ENSOMYG00000016444	stx11b.2 (ENSOMYG00000018987)	mthfd1l (ENSOMYG00000019106) #22	akap12b (ENSOMYG00000019305) #23	zbtb2b (ENSOMYG00000019317) #24	armt1 (ENSOMYG00000019322) #26	esr1 (ENSOMYG00000019366) #28	SYNE1 (ENSOMYG00000019610) #32	ENSOMYG00000060085	myct1a (ENSOMYG00000020449) #33	serac1 (ENSOMYG00000020486)	gtf2h5 (ENSOMYG00000020958)	dynlt1b (ENSOMYG00000020966)	tmem181 (ENSOMYG00000021035)	tulp4a (ENSOMYG00000021592)	mrps10 (ENSOMYG00000021613)	ENSOMYG00000021620	msgn1 (ENSOMYG00000021633)
Salmo	ANCESTRAL SPECIES	12	ENSGT00940000160723.x	ENSGT00530000063408.A.i	ENSGT00940000156778.l.a	ENSGT00510000048701.a.a.b.a	ENSGT00940000155490.a.c.a.d	ENSGT00940000155490.a.c.b.e	ENSGT00950000182906.b.a.i.b.b	ENSGT00940000162477.c.f	ENSGT01030000234595.A.b.a.b.b.b	ENSGT00950000183204.b.b.a	ENSGT00940000156796.c.b.s	ENSGT00940000156796.c.b.t	ENSGT00390000010101.a	ENSGT00940000153467.a.a.i	ENSGT01050000244948.c.b.a.a.a.j	ENSGT00940000157477 #22	ENSGT00730000111244.a.b.c #23	ENSGT00940000158401 #24	ENSGT00530000064023 #26	ENSGT00940000158133.f #28	ENSGT00940000154481.a.b #32	ENSGT00390000011642.e #33	ENSGT00390000003560	ENSGT00940000154531	ENSGT00390000007183	ENSGT00940000155913.d	ENSGT00390000009045	ENSGT01060000249589	ENSGT00530000063712.a.b	ENSGT00940000159266	ENSGT00550000074816.A.a
River trout	MODERN SPECIES		slc22a16 (ENSSTUG00000011431)	usta (ENSSTUG00000011441)	sash1a (ENSSTUG00000011479)	SAMD5 (ENSSTUG00000011555)	ENSSTUG00000011558	ENSSTUG00000011577	stxbp5a (ENSSTUG00000011658)	RAB32 (ENSSTUG00000013927)	GRM1 (ENSSTUG00000013942)	fbxo30b (ENSSTUG00000013954)	ENSSTUG00000013958	ENSSTUG00000014065	EPM2A (ENSSTUG00000014114)	UTRN (ENSSTUG00000014228)	stx11b.2 (ENSSTUG00000018351)	mthfd1l (ENSSTUG00000018403) #22	akap12b (ENSSTUG00000018953) #23	zbtb2b (ENSSTUG00000018963) #24	armt1 (ENSSTUG00000018965) #26	esr1 (ENSSTUG00000018990) #28	SYNE1 (ENSSTUG00000019479) #32	myct1a (ENSSTUG00000022197) #33	serac1 (ENSSTUG00000022211)	DYNLT1 (ENSSTUG00000022563)	tmem181 (ENSSTUG00000022573)	tulp4a (ENSSTUG00000022722)	mrps10 (ENSSTUG00000022781)	ENSSTUG00000022798	msgn1 (ENSSTUG00000022811)	ENSSTUG00000022827	si:dkey-119f1.1 (ENSSTUG00000022888)
Atlantic salmon	MODERN SPECIES	25	ENSSSAG00000116344	sash1a (ENSSSAG00000003305)	ENSSSAG00000109194	ENSSSAG00000091438	ENSSSAG00000003388	stxbp5a (ENSSSAG00000046109)	ENSSSAG00000103951	rab32a (ENSSSAG00000003559)	GRM1 (ENSSSAG00000003580)	ENSSSAG00000003634	ENSSSAG00000105583	ENSSSAG00000003648	ENSSSAG00000091488	ENSSSAG00000003849	ENSSSAG00000005457	mthfd1l (ENSSSAG00000005568) #22	ENSSSAG00000095310	akap12b (ENSSSAG00000007428) #23	zbtb2b (ENSSSAG00000119524) #24	ENSSSAG00000102101	armt1 (ENSSSAG00000007432) #26	esr1 (ENSSSAG00000007452) #28	SYNE1 (ENSSSAG00000007673) #32	myct1a (ENSSSAG00000095476) #33	serac1 (ENSSSAG00000009338)	DYNLT1 (ENSSSAG00000011252)	tmem181 (ENSSSAG00000011402)	tulp4a (ENSSSAG00000012057)	mrps10 (ENSSSAG00000012504)	ENSSSAG00000012699	msgn1 (ENSSSAG00000013523)
Huchen	MODERN SPECIES	1224															STX11 (ENSHHUG00000004086)	mthfd1l (ENSHHUG00000004093) #22	ENSHHUG00000004534	akap12b (ENSHHUG00000004542) #23	zbtb2b (ENSHHUG00000004552) #24	armt1 (ENSHHUG00000004556) #26	esr1 (ENSHHUG00000004561) #28	SYNE1 (ENSHHUG00000005257) #32
Northern pike	MODERN SPECIES	17	ppil6 (ENSELUG00000016932)	cd164 (ENSELUG00000016948)	cep57l1 (ENSELUG00000016989)	sesn1 (ENSELUG00000017036)	ARMC2 (ENSELUG00000017071)	foxo3b (ENSELUG00000017092)	afg1lb (ENSELUG00000017123)	snx3 (ENSELUG00000017150)	nr2e1 (ENSELUG00000017172)	OSTM1 (ENSELUG00000017212)	PLEKHG1 (ENSELUG00000017280) #21	tcp1 (ENSELUG00000017365)	acat2 (ENSELUG00000017338)	STX11 (ENSELUG00000017388)	stx11b.2 (ENSELUG00000017392)	mthfd1l (ENSELUG00000017415) #22	ENSELUG00000017427	zbtb2b (ENSELUG00000000662) #24	ENSELUG00000029127	armt1 (ENSELUG00000000664) #26	esr1 (ENSELUG00000000670) #28	ENSELUG00000027437	myct1a (ENSELUG00000032763) #33	serac1 (ENSELUG00000017822)	gtf2h5 (ENSELUG00000000724)	ENSELUG00000029928	ENSELUG00000017945	dynlt1 (ENSELUG00000017953)	tmem181 (ENSELUG00000017989)	tulp4a (ENSELUG00000018050)	mrps10 (ENSELUG00000018119)
Osteoglossiformes	ANCESTRAL SPECIES	16	ENSGT00530000063583.b	ENSGT00390000002881	ENSGT00940000160723	ENSGT00530000063408.A	ENSGT00940000156778.l	ENSGT00510000048701.a	ENSGT00950000182906.b.a.i.b	ENSGT00390000014904.b	ENSGT00940000162477.c	ENSGT01030000234595.A.b.a.b	ENSGT00950000183204.b.b.b.b	ENSGT00390000010101	ENSGT00940000153467.a.a	ENSGT01050000244948.c.b.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477 #22	ENSGT00730000111244.a.b #23	ENSGT00940000158401 #24	ENSGT00390000013337 #25	ENSGT00530000064023 #26	ENSGT00940000154481.b ##32	ENSGT00390000011642 #33	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000155913.d	ENSGT00390000007183	ENSGT00940000154531.bc	ENSGT00940000164803	ENSGT00940000155566	ENSGT00390000012588	ENSGT00530000065281
P. kingsleyae	MODERN SPECIES	108	sash1a (ENSPKIG00000013509)	SAMD5 (ENSPKIG00000013570)	stxbp5a (ENSPKIG00000013583)	ENSPKIG00000013617	ENSPKIG00000013635	rab32a (ENSPKIG00000013660)	GRM1 (ENSPKIG00000013673)	fbxo30a (ENSPKIG00000013709)	EPM2A (ENSPKIG00000013734)	ENSPKIG00000013777	ENSPKIG00000013890	ENSPKIG00000013916	ENSPKIG00000013962	STX11 (ENSPKIG00000013988)	stx11b.2 (ENSPKIG00000014017)	mthfd1l (ENSPKIG00000014048) #22	ENSPKIG00000014105	zbtb2b (ENSPKIG00000014122) #24	rmnd1 (ENSPKIG00000014133) #25	armt1 (ENSPKIG00000014176) #26	ENSPKIG00000014197 #32	ENSPKIG00000014230 #32	ENSPKIG00000014269	ENSPKIG00000014330 #32
Asian bonytongue	MODERN SPECIES		WASF1 (ENSSFOG00015026037)	cdc40 (ENSSFOG00015015256)	METTL24 (ENSSFOG00015015299)	slc22a16 (ENSSFOG00015015310)	usta (ENSSFOG00015013036)	sash1a (ENSSFOG00015015347)	stxbp5a (ENSSFOG00015015416)	ADGB (ENSSFOG00015025043)	rab32a (ENSSFOG00015016627)	GRM1 (ENSSFOG00015015528)	fbxo30a (ENSSFOG00015024690)	EPM2A (ENSSFOG00015027817)	UTRN (ENSSFOG00015015814)	STX11 (ENSSFOG00015027044)	stx11b.2 (ENSSFOG00015015983)	mthfd1l (ENSSFOG00015016042) #22	akap12b (ENSSFOG00015016302) #23	zbtb2b (ENSSFOG00015029201) #24	rmnd1 (ENSSFOG00015016335) #25	armt1 (ENSSFOG00015016388) #26	myct1a (ENSSFOG00015016675) #33	serac1 (ENSSFOG00015016699)	gtf2h5 (ENSSFOG00015016783)	tulp4a (ENSSFOG00015016795)	tmem181 (ENSSFOG00015016813)	DYNLT1 (ENSSFOG00015016851)	ENSSFOG00015016905	tbx18 (ENSSFOG00015024779)	irak1bp1 (ENSSFOG00015016960)	ENSSFOG00015031240	PHIP (ENSSFOG00015016980)
Spotted gar	MODERN SPECIES	647	tfap2d (ENSLOCG00000016336)	hadhb (ENSLOCG00000016333)	hadhab (ENSLOCG00000016329)	GAREM2 (ENSLOCG00000016328)	rab10 (ENSLOCG00000016323)	KIF3C (ENSLOCG00000016321)	ASXL2 (ENSLOCG00000016319)	dtnbb (ENSLOCG00000016318)	dnmt3ab (ENSLOCG00000016317)	dpysl5a (ENSLOCG00000016314)	mapre3b (ENSLOCG00000016310)	tmem214 (ENSLOCG00000016307)	stx11a (ENSLOCG00000017995)	ENSLOCG00000016305	ENSLOCG00000016304	mthfd1l (ENSLOCG00000016297) #22	akap12b (ENSLOCG00000016296) #23	zbtb2b (ENSLOCG00000016295) #24	rmnd1 (ENSLOCG00000016293) #25	CCDC170 (ENSLOCG00000016291) #27	esr1 (ENSLOCG00000016285) #28	SYNE1 (ENSLOCG00000016272) #32	myct1a (ENSLOCG00000016271) #33	serac1 (ENSLOCG00000016268)	gtf2h5 (ENSLOCG00000016267)	tulp4a (ENSLOCG00000016263)	tmem181 (ENSLOCG00000016260)	DYNLT1 (ENSLOCG00000016258)	ENSLOCG00000016257	tbx18 (ENSLOCG00000016254)	irak1bp1 (ENSLOCG00000016253)
Reedfish	MODERN SPECIES	11	tpbgb (ENSECRG00000002220)	IBTK (ENSECRG00000002235)	tent5ab (ENSECRG00000002265)	bckdhb (ENSECRG00000002292)	ttk (ENSECRG00000002360)	elovl4b (ENSECRG00000002398)	SOGA3 (ENSECRG00000002417)	ENSECRG00000002433	ECHDC1 (ENSECRG00000002449)	rnf146 (ENSECRG00000002462)	rspo3 (ENSECRG00000002476)	ENSECRG00000002489	trmt11 (ENSECRG00000002496)	ENSECRG00000002519	hint3 (ENSECRG00000002530)	mthfd1l (ENSECRG00000002561) #22	AKAP12 (ENSECRG00000002609) #23	zbtb2b (ENSECRG00000002618) #24	rmnd1 (ENSECRG00000002627) #25	armt1 (ENSECRG00000002644) #26	CCDC170 (ENSECRG00000002672) #27	esr1 (ENSECRG00000002701) #28	SYNE1 (ENSECRG00000002759) #32	myct1a (ENSECRG00000002842) #33	serac1 (ENSECRG00000002858)	gtf2h5 (ENSECRG00000002881)	tulp4a (ENSECRG00000002895)	tmem181 (ENSECRG00000002921)	DYNLT1 (ENSECRG00000002940)	tbx18 (ENSECRG00000002962)	irak1bp1 (ENSECRG00000003097)