Gnathostomata ANCESTRAL SPECIES 117 ENSGT00940000158231 ENSGT00940000158406 ENSGT00940000160503 ENSGT00940000155131 ENSGT00940000154065.b ENSGT00390000000292.B ENSGT00730000111141 ENSGT00390000000447 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000153577.A ENSGT00510000046499 ENSGT00390000016421.b.a ENSGT00940000160495 Euteleostomi ANCESTRAL SPECIES 37 ENSGT00940000161651 ENSGT00940000162722 ENSGT00940000158231 ENSGT00940000158406 ENSGT00940000160503 ENSGT00940000155131 ENSGT00940000154065.b ENSGT00390000000292.B ENSGT00730000111141 ENSGT00390000000447 ENSGT00940000172034 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000014606 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000153577.A ENSGT00510000046499 ENSGT00390000016421.b.a ENSGT00940000160495 ENSGT00550000074968 ENSGT00940000177223 Sarcopterygii ANCESTRAL SPECIES 205 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.B ENSGT00940000154065.b ENSGT00940000155131 Tetrapoda ANCESTRAL SPECIES 28 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A ENSGT00390000000292.B ENSGT00940000154065.b Amniota ANCESTRAL SPECIES ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 Mammalia ANCESTRAL SPECIES ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 Theria ANCESTRAL SPECIES 1 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 Eutheria ANCESTRAL SPECIES 5 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 Primates ANCESTRAL SPECIES 1 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 Haplorrhini ANCESTRAL SPECIES 22 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 Tarsier MODERN SPECIES 7236 RUNX1 (ENSTSYG00000005097) #22 CLIC6 (ENSTSYG00000028636) #23 RCAN1 (ENSTSYG00000006972) #24 SMIM34 (ENSTSYG00000037156) #25 SMIM11A (ENSTSYG00000027066) #26 Simiiformes ANCESTRAL SPECIES 1 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00940000166607 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 Catarrhini ANCESTRAL SPECIES 25 ENSGT00950000183064.b ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00940000166607 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000010806.u.a.a ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447 Hominoidea ANCESTRAL SPECIES 26 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00910000147159 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00940000166607 ENSGT00510000046499 ENSGT00390000014577.a.j ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000010806.u.a.a ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141.i Hominidae ANCESTRAL SPECIES 25 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00910000147159 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00940000166607.f ENSGT00510000046499 ENSGT00390000014577.a.j ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610.a #26 ENSGT00940000154497.B ENSGT00390000010806.u.a.a ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141.i Homo/Pan/Gorilla group ANCESTRAL SPECIES 27 ENSGT00730000111429 ENSGT00910000147159 ENSGT00390000002960 ENSGT00940000159985 ENSGT00530000064050.ab ENSGT00580000082495.a.a ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00940000166607.f ENSGT00510000046499 ENSGT00390000014577.a.j ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610.a #26 ENSGT00940000154497.B ENSGT00390000010806.u.a.a ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141.i Homo/Pan group ANCESTRAL SPECIES 26 ENSGT00390000013771.u ENSGT00730000111429 ENSGT00910000147159 ENSGT00390000002960 ENSGT00940000159985 ENSGT00530000064050.ab ENSGT00580000082495.a.a ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00390000014577.a.j ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610.a #26 ENSGT00940000154497.B ENSGT00390000010806.u.a.a ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141.i Pan ANCESTRAL SPECIES 27 ENSGT00730000111429 ENSGT00910000147159 ENSGT00390000002960 ENSGT00940000159985 ENSGT00530000064050.ab ENSGT00580000082495.a.a ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00940000166607.f ENSGT00510000046499 ENSGT00390000014577.a.j ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00620000089398 ENSGT00940000154497.B ENSGT00390000010806.u.a.a ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141.i Chimpanzee MODERN SPECIES 12 RIPPLY3 (ENSPTRG00000013896) HLCS (ENSPTRG00000013895) SIM2 (ENSPTRG00000013894) ENSPTRG00000048635 ENSPTRG00000052426 CLDN14 (ENSPTRG00000013892) CHAF1B (ENSPTRG00000013891) MORC3 (ENSPTRG00000013890) DOP1B (ENSPTRG00000013889) CBR3 (ENSPTRG00000032586) ENSPTRG00000049556 ENSPTRG00000011810 CBR1 (ENSPTRG00000013886) ENSPTRG00000047714 SETD4 (ENSPTRG00000013884) RUNX1 (ENSPTRG00000013883) #22 CLIC6 (ENSPTRG00000013882) #23 RCAN1 (ENSPTRG00000013881) #24 KCNE1 (ENSPTRG00000013880) SMIM34 (ENSPTRG00000041603) #25 C21orf140 (ENSPTRG00000039422) ENSPTRG00000044999 KCNE2 (ENSPTRG00000031433) ENSPTRG00000051381 MRPS6 (ENSPTRG00000013877) ATP5PO (ENSPTRG00000013876) ITSN1 (ENSPTRG00000031436) CRYZL1 (ENSPTRG00000013874) DONSON (ENSPTRG00000034273) SON (ENSPTRG00000013872) ENSPTRG00000013871 Bonobo MODERN SPECIES 12 ENSPPAG00000034271 HLCS (ENSPPAG00000033846) ENSPPAG00000032977 ENSPPAG00000031314 ENSPPAG00000030435 CLDN14 (ENSPPAG00000032950) CHAF1B (ENSPPAG00000029854) MORC3 (ENSPPAG00000028947) DOP1B (ENSPPAG00000024601) CBR3 (ENSPPAG00000014146) ENSPPAG00000034490 ENSPPAG00000031255 CBR1 (ENSPPAG00000032317) ENSPPAG00000037894 SETD4 (ENSPPAG00000040871) RUNX1 (ENSPPAG00000003231) #22 ENSPPAG00000032673 #23 ENSPPAG00000034144 #24 KCNE1 (ENSPPAG00000015609) SMIM34 (ENSPPAG00000033822) #25 C21orf140 (ENSPPAG00000006461) ENSPPAG00000032575 KCNE2 (ENSPPAG00000004198) ENSPPAG00000037379 MRPS6 (ENSPPAG00000033507) SLC5A3 (ENSPPAG00000017773) ENSPPAG00000012437 ITSN1 (ENSPPAG00000040351) CRYZL1 (ENSPPAG00000000248) DONSON (ENSPPAG00000032880) SON (ENSPPAG00000033712) Human MODERN SPECIES 13 KCNJ6 (ENSG00000157542) DYRK1A (ENSG00000157540) VPS26C (ENSG00000157538) TTC3 (ENSG00000182670) PIGP (ENSG00000185808) RIPPLY3 (ENSG00000183145) HLCS (ENSG00000159267) SIM2 (ENSG00000159263) CLDN14 (ENSG00000159261) CHAF1B (ENSG00000159259) MORC3 (ENSG00000159256) DOP1B (ENSG00000142197) CBR3 (ENSG00000159231) CBR1 (ENSG00000159228) SETD4 (ENSG00000185917) RUNX1 (ENSG00000159216) #22 CLIC6 (ENSG00000159212) #23 RCAN1 (ENSG00000159200) #24 KCNE1 (ENSG00000180509) SMIM34 (ENSG00000243627) #25 C21orf140 (ENSG00000222018) SMIM11 (ENSG00000205670) #26 KCNE2 (ENSG00000159197) SLC5A3 (ENSG00000198743) MRPS6 (ENSG00000243927) ATP5PO (ENSG00000241837) ITSN1 (ENSG00000205726) CRYZL1 (ENSG00000205758) ENSG00000249209 DONSON (ENSG00000159147) SON (ENSG00000159140) Gorilla MODERN SPECIES 12 PIGP (ENSGGOG00000010275) RIPPLY3 (ENSGGOG00000038116) HLCS (ENSGGOG00000011135) SIM2 (ENSGGOG00000014943) ENSGGOG00000025047 ENSGGOG00000038854 CLDN14 (ENSGGOG00000014893) CHAF1B (ENSGGOG00000015726) MORC3 (ENSGGOG00000011974) ENSGGOG00000024302 DOP1B (ENSGGOG00000003793) CBR3 (ENSGGOG00000014349) ENSGGOG00000040284 CBR1 (ENSGGOG00000002956) SETD4 (ENSGGOG00000026619) RUNX1 (ENSGGOG00000040263) #22 ENSGGOG00000041523 CLIC6 (ENSGGOG00000023723) #23 ENSGGOG00000040245 #24 SMIM34 (ENSGGOG00000044203) #25 C21orf140 (ENSGGOG00000024658) ENSGGOG00000027986 KCNE2 (ENSGGOG00000009542) ENSGGOG00000022062 MRPS6 (ENSGGOG00000043405) ENSGGOG00000027889 ENSGGOG00000038888 ATP5PO (ENSGGOG00000012611) ITSN1 (ENSGGOG00000012580) CRYZL1 (ENSGGOG00000041978) DONSON (ENSGGOG00000012322) Orangutan MODERN SPECIES 12 DYRK1A (ENSPPYG00000011412) VPS26C (ENSPPYG00000040834) TTC3 (ENSPPYG00000011410) PIGP (ENSPPYG00000011409) RIPPLY3 (ENSPPYG00000040629) HLCS (ENSPPYG00000011406) SIM2 (ENSPPYG00000011405) CLDN14 (ENSPPYG00000011404) CHAF1B (ENSPPYG00000011403) MORC3 (ENSPPYG00000011402) DOP1B (ENSPPYG00000011401) CBR3 (ENSPPYG00000011400) CBR1 (ENSPPYG00000011399) SETD4 (ENSPPYG00000011398) ENSPPYG00000011422 RUNX1 (ENSPPYG00000011394) #22 RCAN1 (ENSPPYG00000011392) #24 KCNE1 (ENSPPYG00000011390) SMIM34 (ENSPPYG00000011389) #25 C21orf140 (ENSPPYG00000030964) SMIM11 (ENSPPYG00000031703) #26 KCNE2 (ENSPPYG00000011388) ENSPPYG00000011386 ATP5PO (ENSPPYG00000011384) ITSN1 (ENSPPYG00000011383) CRYZL1 (ENSPPYG00000011382) DONSON (ENSPPYG00000011381) SON (ENSPPYG00000011380) GART (ENSPPYG00000011379) DNAJC28 (ENSPPYG00000011378) TMEM50B (ENSPPYG00000011377) Gibbon MODERN SPECIES 17 PIGP (ENSNLEG00000004523) ENSNLEG00000004521 ENSNLEG00000031839 HLCS (ENSNLEG00000004489) ENSNLEG00000004481 ENSNLEG00000034915 CLDN14 (ENSNLEG00000004475) CHAF1B (ENSNLEG00000004429) MORC3 (ENSNLEG00000004420) DOP1B (ENSNLEG00000004382) CBR3 (ENSNLEG00000004374) ENSNLEG00000035603 CBR1 (ENSNLEG00000004363) ENSNLEG00000033288 SETD4 (ENSNLEG00000004341) RUNX1 (ENSNLEG00000004310) #22 ENSNLEG00000030048 #24 KCNE1 (ENSNLEG00000032039) SMIM34 (ENSNLEG00000004268) #25 C21orf140 (ENSNLEG00000018517) ENSNLEG00000018516 KCNE2 (ENSNLEG00000029270) ENSNLEG00000034909 MRPS6 (ENSNLEG00000033707) ATP5PO (ENSNLEG00000031791) ITSN1 (ENSNLEG00000004125) CRYZL1 (ENSNLEG00000004070) DONSON (ENSNLEG00000004043) SON (ENSNLEG00000004002) GART (ENSNLEG00000003903) DNAJC28 (ENSNLEG00000003899) Cercopithecidae ANCESTRAL SPECIES 28 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968.a ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000010806.u.a.a ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m.c ENSGT00910000148550 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 Cercopithecinae ANCESTRAL SPECIES 23 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968.a ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m.c ENSGT00910000148550 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447.g.a ENSGT00940000172034 Vervet Monkey MODERN SPECIES 11 KCNJ6 (ENSCSAG00000008472) ENSCSAG00000018712 DYRK1A (ENSCSAG00000008483) VPS26C (ENSCSAG00000008515) ENSCSAG00000008520 PIGP (ENSCSAG00000008532) HLCS (ENSCSAG00000008541) SIM2 (ENSCSAG00000008567) CLDN14 (ENSCSAG00000018711) CHAF1B (ENSCSAG00000008631) MORC3 (ENSCSAG00000008649) DOP1B (ENSCSAG00000008670) CBR3 (ENSCSAG00000008678) CBR1 (ENSCSAG00000008686) SETD4 (ENSCSAG00000008698) RUNX1 (ENSCSAG00000008703) #22 RCAN1 (ENSCSAG00000008724) #24 KCNE1 (ENSCSAG00000018710) ENSCSAG00000018709 LIPI (ENSCSAG00000008733) ENSCSAG00000008785 HSPA13 (ENSCSAG00000008813) SAMSN1 (ENSCSAG00000008820) ENSCSAG00000008829 NRIP1 (ENSCSAG00000018708) USP25 (ENSCSAG00000008844) ENSCSAG00000008848 ENSCSAG00000008850 ENSCSAG00000018707 CXADR (ENSCSAG00000008858) BTG3 (ENSCSAG00000008865) Cercopithecinae_a ANCESTRAL SPECIES 22 ENSGT00950000183064.b ENSGT00910000147749 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968.a ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m.c ENSGT00910000148550 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447.g.b Cercopithecinae_b ANCESTRAL SPECIES 29 ENSGT00950000183064.b ENSGT00910000147749 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00910000147159 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968.a ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m.c ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447.g.b ENSGT00730000111141 ENSGT00390000000292.C Olive baboon MODERN SPECIES 14 PIGP (ENSPANG00000019363) RIPPLY3 (ENSPANG00000033880) ENSPANG00000044488 ENSPANG00000038151 HLCS (ENSPANG00000011262) SIM2 (ENSPANG00000020491) ENSPANG00000042290 CLDN14 (ENSPANG00000010824) CHAF1B (ENSPANG00000015137) MORC3 (ENSPANG00000009396) DOP1B (ENSPANG00000008641) CBR3 (ENSPANG00000037794) CBR1 (ENSPANG00000009395) SETD4 (ENSPANG00000018650) ENSPANG00000036975 RUNX1 (ENSPANG00000007357) #22 CLIC6 (ENSPANG00000019278) #23 RCAN1 (ENSPANG00000019279) #24 ENSPANG00000047874 SMIM34 (ENSPANG00000011290) #25 C21orf140 (ENSPANG00000009331) SMIM11 (ENSPANG00000003351) #26 KCNE2 (ENSPANG00000043695) MRPS6 (ENSPANG00000037531) ENSPANG00000037553 ATP5PO (ENSPANG00000006856) ITSN1 (ENSPANG00000005019) CRYZL1 (ENSPANG00000021754) DONSON (ENSPANG00000016795) SON (ENSPANG00000024077) GART (ENSPANG00000008639) Cercopithecinae_d ANCESTRAL SPECIES 36 ENSGT00730000111429 ENSGT00390000015823 ENSGT00910000147197 ENSGT00730000111599 ENSGT00940000160734 ENSGT00910000147159 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968.a ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00620000089398 ENSGT00390000005569.x.a.a.b ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m.c ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000004856.w.b ENSGT00390000000447.h ENSGT00730000111141 ENSGT00390000000292.C Sooty mangabey MODERN SPECIES 465 DYRK1A (ENSCATG00000044358) VPS26C (ENSCATG00000019393) TTC3 (ENSCATG00000041926) PIGP (ENSCATG00000038403) RIPPLY3 (ENSCATG00000045245) ENSCATG00000040437 ENSCATG00000034753 HLCS (ENSCATG00000043493) SIM2 (ENSCATG00000031206) CLDN14 (ENSCATG00000015596) CHAF1B (ENSCATG00000044079) MORC3 (ENSCATG00000031109) DOP1B (ENSCATG00000039330) CBR3 (ENSCATG00000033283) SETD4 (ENSCATG00000007362) RUNX1 (ENSCATG00000040591) #22 CLIC6 (ENSCATG00000042396) #23 RCAN1 (ENSCATG00000042527) #24 C21orf140 (ENSCATG00000017855) ENSCATG00000043090 ENSCATG00000034986 MRPS6 (ENSCATG00000005273) ENSCATG00000004647 ITSN1 (ENSCATG00000036969) ENSCATG00000030597 CRYZL1 (ENSCATG00000043536) DONSON (ENSCATG00000037663) SON (ENSCATG00000029812) GART (ENSCATG00000037670) DNAJC28 (ENSCATG00000014045) TMEM50B (ENSCATG00000038801) Drill MODERN SPECIES 1286 RUNX1 (ENSMLEG00000028218) #22 RCAN1 (ENSMLEG00000033492) #24 SMIM34 (ENSMLEG00000039845) #25 C21orf140 (ENSMLEG00000026588) ENSMLEG00000030690 ENSMLEG00000040248 ENSMLEG00000039713 MRPS6 (ENSMLEG00000042372) SLC5A3 (ENSMLEG00000005849) ENSMLEG00000040093 ITSN1 (ENSMLEG00000032969) ENSMLEG00000042052 CRYZL1 (ENSMLEG00000028800) DONSON (ENSMLEG00000027342) SON (ENSMLEG00000035039) GART (ENSMLEG00000033385) Macaca ANCESTRAL SPECIES 3 ENSGT00950000183064.b ENSGT00910000147749 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968.a ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00620000089398 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m.c ENSGT00910000148550 ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447.g.b Pig-tailed macaque MODERN SPECIES 503 VPS26C (ENSMNEG00000019931) ENSMNEG00000028032 TTC3 (ENSMNEG00000017406) PIGP (ENSMNEG00000029111) RIPPLY3 (ENSMNEG00000039675) ENSMNEG00000000027 HLCS (ENSMNEG00000034742) ENSMNEG00000030036 SIM2 (ENSMNEG00000041947) CLDN14 (ENSMNEG00000029635) CHAF1B (ENSMNEG00000031007) MORC3 (ENSMNEG00000028195) DOP1B (ENSMNEG00000015370) CBR1 (ENSMNEG00000037940) SETD4 (ENSMNEG00000032608) RUNX1 (ENSMNEG00000045032) #22 CLIC6 (ENSMNEG00000043683) #23 RCAN1 (ENSMNEG00000028654) #24 SMIM34 (ENSMNEG00000039585) #25 ENSMNEG00000043897 C21orf140 (ENSMNEG00000026438) MRPS6 (ENSMNEG00000004266) ENSMNEG00000042976 SLC5A3 (ENSMNEG00000015243) ENSMNEG00000042235 ENSMNEG00000024519 ITSN1 (ENSMNEG00000043836) CRYZL1 (ENSMNEG00000029182) ENSMNEG00000030330 SON (ENSMNEG00000031671) GART (ENSMNEG00000037254) Macaca_a ANCESTRAL SPECIES 22 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.b.a.a.a.a.c.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968.a ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000163505.a.a.a.b.a.b.b.a.a.b.a.a.a ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.b.a.a.a ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060.m.c ENSGT00940000157065 ENSGT00390000013113 ENSGT00940000172034 ENSGT00390000000447.g.b ENSGT00730000111141 Rhesus MODERN SPECIES 13 KCNJ6 (ENSMMUG00000018136) DYRK1A (ENSMMUG00000018131) VPS26C (ENSMMUG00000006962) TTC3 (ENSMMUG00000017505) PIGP (ENSMMUG00000016211) ENSMMUG00000058732 RIPPLY3 (ENSMMUG00000043090) HLCS (ENSMMUG00000015566) SIM2 (ENSMMUG00000058333) CLDN14 (ENSMMUG00000000488) CHAF1B (ENSMMUG00000007399) MORC3 (ENSMMUG00000020043) DOP1B (ENSMMUG00000010336) CBR1 (ENSMMUG00000020565) SETD4 (ENSMMUG00000001125) RUNX1 (ENSMMUG00000001649) #22 CLIC6 (ENSMMUG00000004605) #23 ENSMMUG00000058383 RCAN1 (ENSMMUG00000004600) #24 SMIM34 (ENSMMUG00000062608) #25 C21orf140 (ENSMMUG00000043099) ENSMMUG00000062991 KCNE2 (ENSMMUG00000053087) MRPS6 (ENSMMUG00000062903) ENSMMUG00000056354 ENSMMUG00000053203 ENSMMUG00000054417 DONSON (ENSMMUG00000003701) ITSN1 (ENSMMUG00000007626) CRYZL1 (ENSMMUG00000003703) SON (ENSMMUG00000005511) Crab-eating macaque MODERN SPECIES 13 ENSMFAG00000060619 KCNJ6 (ENSMFAG00000040836) DYRK1A (ENSMFAG00000035589) VPS26C (ENSMFAG00000041827) TTC3 (ENSMFAG00000045889) ENSMFAG00000040294 ENSMFAG00000053400 HLCS (ENSMFAG00000031411) SIM2 (ENSMFAG00000002855) CLDN14 (ENSMFAG00000029830) CHAF1B (ENSMFAG00000040980) MORC3 (ENSMFAG00000042335) DOP1B (ENSMFAG00000002007) CBR1 (ENSMFAG00000045053) SETD4 (ENSMFAG00000017853) ENSMFAG00000032652 #22 ENSMFAG00000048386 RCAN1 (ENSMFAG00000000212) #24 ENSMFAG00000060638 SMIM34 (ENSMFAG00000063086) #25 ENSMFAG00000048893 C21orf140 (ENSMFAG00000027330) ENSMFAG00000036110 KCNE2 (ENSMFAG00000053165) MRPS6 (ENSMFAG00000054144) ENSMFAG00000050777 ENSMFAG00000057944 ATP5PO (ENSMFAG00000036539) ITSN1 (ENSMFAG00000044012) CRYZL1 (ENSMFAG00000046076) ENSMFAG00000050642 Rhinopithecus ANCESTRAL SPECIES 70 ENSGT00950000183064.b ENSGT00910000147749 ENSGT01100000263504.a.a.yb.m.a ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968.a ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000010806.u.a.a ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.m.c ENSGT00910000148550 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Golden snub-nosed monkey MODERN SPECIES 3327 RUNX1 (ENSRROG00000042132) #22 CLIC6 (ENSRROG00000044438) #23 RCAN1 (ENSRROG00000028777) #24 SMIM34 (ENSRROG00000037837) #25 SMIM11 (ENSRROG00000003097) #26 KCNE2 (ENSRROG00000003188) ENSRROG00000039369 MRPS6 (ENSRROG00000040127) ENSRROG00000034203 ITSN1 (ENSRROG00000033798) CRYZL1 (ENSRROG00000042116) DONSON (ENSRROG00000041828) SON (ENSRROG00000042156) GART (ENSRROG00000031998) DNAJC28 (ENSRROG00000017528) TMEM50B (ENSRROG00000036102) Black snub-nosed monkey MODERN SPECIES 741 MORC3 (ENSRBIG00000030969) DOP1B (ENSRBIG00000027740) ENSRBIG00000037263 CBR1 (ENSRBIG00000043004) SETD4 (ENSRBIG00000029043) ENSRBIG00000032358 RUNX1 (ENSRBIG00000006103) #22 CLIC6 (ENSRBIG00000034684) #23 RCAN1 (ENSRBIG00000034472) #24 KCNE1 (ENSRBIG00000008227) SMIM11 (ENSRBIG00000028103) #26 KCNE2 (ENSRBIG00000030431) ENSRBIG00000031827 MRPS6 (ENSRBIG00000003438) SLC5A3 (ENSRBIG00000029684) ENSRBIG00000036080 ENSRBIG00000037394 ITSN1 (ENSRBIG00000038823) ENSRBIG00000043797 ENSRBIG00000032684 DONSON (ENSRBIG00000002546) ENSRBIG00000044269 Platyrrhini ANCESTRAL SPECIES 31 ENSGT00950000183064.b.g.a ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00940000166607 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.o ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Mas night monkey MODERN SPECIES 1376 ENSANAG00000024896 ENSANAG00000033496 PIGP (ENSANAG00000034997) RIPPLY3 (ENSANAG00000029570) HLCS (ENSANAG00000030482) ENSANAG00000034736 SIM2 (ENSANAG00000038264) ENSANAG00000019825 ENSANAG00000030520 CHAF1B (ENSANAG00000023285) MORC3 (ENSANAG00000038319) DOP1B (ENSANAG00000029600) CBR3 (ENSANAG00000036438) CBR1 (ENSANAG00000018784) SETD4 (ENSANAG00000034449) RUNX1 (ENSANAG00000029792) #22 CLIC6 (ENSANAG00000022769) #23 RCAN1 (ENSANAG00000034808) #24 SMIM34 (ENSANAG00000030164) #25 SMIM11 (ENSANAG00000030557) #26 MRPS6 (ENSANAG00000022450) ENSANAG00000037787 ITSN1 (ENSANAG00000025399) CRYZL1 (ENSANAG00000038224) DONSON (ENSANAG00000032682) SON (ENSANAG00000035426) GART (ENSANAG00000000266) ENSANAG00000019848 ENSANAG00000025203 IFNGR2 (ENSANAG00000037994) IFNAR1 (ENSANAG00000031070) Cebidae ANCESTRAL SPECIES 32 ENSGT00940000157408 ENSGT00950000183064.b.g.a ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00940000166607 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.o ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Marmoset MODERN SPECIES 13 KCNJ6 (ENSCJAG00000002599) DYRK1A (ENSCJAG00000002609) VPS26C (ENSCJAG00000002626) TTC3 (ENSCJAG00000002640) PIGP (ENSCJAG00000002683) HLCS (ENSCJAG00000002697) SIM2 (ENSCJAG00000002704) CLDN14 (ENSCJAG00000002769) CHAF1B (ENSCJAG00000002772) MORC3 (ENSCJAG00000002781) DOP1B (ENSCJAG00000002725) CBR3 (ENSCJAG00000081554) ENSCJAG00000072558 CBR1 (ENSCJAG00000038083) SETD4 (ENSCJAG00000002805) RUNX1 (ENSCJAG00000002816) #22 CLIC6 (ENSCJAG00000075715) #23 RCAN1 (ENSCJAG00000002838) #24 ENSCJAG00000081920 KCNE1 (ENSCJAG00000081015) SMIM34 (ENSCJAG00000002854) #25 C21orf140 (ENSCJAG00000022487) SMIM11 (ENSCJAG00000070404) #26 KCNE2 (ENSCJAG00000076763) ENSCJAG00000074406 ATP5PO (ENSCJAG00000039761) ITSN1 (ENSCJAG00000002882) CRYZL1 (ENSCJAG00000037369) DONSON (ENSCJAG00000003034) SON (ENSCJAG00000046975) GART (ENSCJAG00000003083) Cebidae_a ANCESTRAL SPECIES 29 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.g.a ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00490000044099 #25 ENSGT00620000089398 ENSGT00640000091610 #26 ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.o ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b ENSGT00940000155131 Capuchin MODERN SPECIES 41 ENSCCAG00000030643 ENSCCAG00000033805 ENSCCAG00000038088 PIGP (ENSCCAG00000036761) RIPPLY3 (ENSCCAG00000034670) HLCS (ENSCCAG00000036991) SIM2 (ENSCCAG00000026136) CLDN14 (ENSCCAG00000015219) CHAF1B (ENSCCAG00000035975) MORC3 (ENSCCAG00000036336) DOP1B (ENSCCAG00000030883) CBR3 (ENSCCAG00000034324) CBR1 (ENSCCAG00000029444) SETD4 (ENSCCAG00000028222) ENSCCAG00000028204 RUNX1 (ENSCCAG00000032241) #22 CLIC6 (ENSCCAG00000037202) #23 RCAN1 (ENSCCAG00000032160) #24 SMIM34 (ENSCCAG00000026706) #25 ENSCCAG00000026235 SMIM11 (ENSCCAG00000028538) #26 MRPS6 (ENSCCAG00000024506) ENSCCAG00000003555 ITSN1 (ENSCCAG00000036870) CRYZL1 (ENSCCAG00000036618) ENSCCAG00000032431 SON (ENSCCAG00000030234) GART (ENSCCAG00000022438) ENSCCAG00000009442 TMEM50B (ENSCCAG00000021667) IFNGR2 (ENSCCAG00000029482) Bolivian squirrel monkey MODERN SPECIES 66 ENSSBOG00000019510 KCNJ6 (ENSSBOG00000027870) DYRK1A (ENSSBOG00000031681) ENSSBOG00000004124 TTC3 (ENSSBOG00000023926) PIGP (ENSSBOG00000029088) HLCS (ENSSBOG00000030015) SIM2 (ENSSBOG00000034637) CLDN14 (ENSSBOG00000018972) CHAF1B (ENSSBOG00000032911) ENSSBOG00000031211 DOP1B (ENSSBOG00000034256) CBR3 (ENSSBOG00000021978) CBR1 (ENSSBOG00000025124) SETD4 (ENSSBOG00000023386) RUNX1 (ENSSBOG00000031977) #22 CLIC6 (ENSSBOG00000033051) #23 RCAN1 (ENSSBOG00000019189) #24 SMIM34 (ENSSBOG00000032235) #25 ENSSBOG00000029680 SMIM11 (ENSSBOG00000032382) #26 MRPS6 (ENSSBOG00000034972) SLC5A3 (ENSSBOG00000019154) ENSSBOG00000029690 ITSN1 (ENSSBOG00000026172) CRYZL1 (ENSSBOG00000022246) ENSSBOG00000034050 SON (ENSSBOG00000020885) GART (ENSSBOG00000027956) DNAJC28 (ENSSBOG00000035319) TMEM50B (ENSSBOG00000012972) Strepsirrhini ANCESTRAL SPECIES 1 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Lemuriformes ANCESTRAL SPECIES 9 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.tc.a.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Mouse lemur MODERN SPECIES 24 TTC3 (ENSMICG00000006423) ENSMICG00000027574 RIPPLY3 (ENSMICG00000031167) HLCS (ENSMICG00000013188) SIM2 (ENSMICG00000013168) CHAF1B (ENSMICG00000013158) MORC3 (ENSMICG00000007884) DOP1B (ENSMICG00000002181) CBR3 (ENSMICG00000002179) ENSMICG00000043284 ENSMICG00000032128 ENSMICG00000002173 ENSMICG00000041557 ENSMICG00000029421 SETD4 (ENSMICG00000031716) RUNX1 (ENSMICG00000011998) #22 CLIC6 (ENSMICG00000035327) #23 RCAN1 (ENSMICG00000011975) #24 SMIM34 (ENSMICG00000028809) #25 SMIM11 (ENSMICG00000011972) #26 MRPS6 (ENSMICG00000027621) ATP5PO (ENSMICG00000007090) ITSN1 (ENSMICG00000007068) ENSMICG00000004637 ENSMICG00000004626 SON (ENSMICG00000033920) GART (ENSMICG00000004559) TMEM50B (ENSMICG00000037949) IFNGR2 (ENSMICG00000009314) IFNAR1 (ENSMICG00000006359) IL10RB (ENSMICG00000006353) Lemuriformes_a ANCESTRAL SPECIES 60 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.tc.a.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Coquerels sifaka MODERN SPECIES 874 ENSPCOG00000017711 SETD4 (ENSPCOG00000022679) ENSPCOG00000022805 RUNX1 (ENSPCOG00000018864) #22 Greater bamboo lemur MODERN SPECIES 555 VPS26C (ENSPSMG00000010808) TTC3 (ENSPSMG00000010906) ENSPSMG00000010922 PIGP (ENSPSMG00000010935) RIPPLY3 (ENSPSMG00000010945) HLCS (ENSPSMG00000010960) SIM2 (ENSPSMG00000010983) CLDN14 (ENSPSMG00000010992) CHAF1B (ENSPSMG00000011013) MORC3 (ENSPSMG00000011069) DOP1B (ENSPSMG00000011196) CBR3 (ENSPSMG00000011227) ENSPSMG00000011231 ENSPSMG00000011280 SETD4 (ENSPSMG00000011336) RUNX1 (ENSPSMG00000011432) #22 ENSPSMG00000011501 #23 RCAN1 (ENSPSMG00000011560) #24 KCNE1 (ENSPSMG00000011579) SMIM34 (ENSPSMG00000011588) #25 C21orf140 (ENSPSMG00000011591) ENSPSMG00000011598 #26 KCNE2 (ENSPSMG00000011607) MRPS6 (ENSPSMG00000011623) ATP5PO (ENSPSMG00000011637) ITSN1 (ENSPSMG00000012297) CRYZL1 (ENSPSMG00000013266) DONSON (ENSPSMG00000013324) SON (ENSPSMG00000013388) GART (ENSPSMG00000013463) DNAJC28 (ENSPSMG00000013509) Bushbaby MODERN SPECIES 226 ENSOGAG00000031575 ENSOGAG00000011437 SETD4 (ENSOGAG00000017061) RUNX1 (ENSOGAG00000033362) #22 CLIC6 (ENSOGAG00000026013) #23 RCAN1 (ENSOGAG00000004659) #24 KCNE1 (ENSOGAG00000004656) C21orf140 (ENSOGAG00000031082) SMIM11 (ENSOGAG00000034587) #26 KCNE2 (ENSOGAG00000000182) MRPS6 (ENSOGAG00000031219) ENSOGAG00000015850 ITSN1 (ENSOGAG00000015839) CRYZL1 (ENSOGAG00000015836) DONSON (ENSOGAG00000032566) SON (ENSOGAG00000027319) GART (ENSOGAG00000015814) DNAJC28 (ENSOGAG00000015823) TMEM50B (ENSOGAG00000000249) Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Tree shrew MODERN SPECIES 2879 RUNX1 (ENSTBEG00000000192) #22 CLIC6 (ENSTBEG00000000159) #23 Glires ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Lagomorpha ANCESTRAL SPECIES 155 ENSGT00940000159255 #22 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b ENSGT00940000155131 Rabbit MODERN SPECIES 462 RUNX1 (ENSOCUG00000013731) #22 RCAN1 (ENSOCUG00000010604) #24 KCNE1 (ENSOCUG00000013485) C21orf140 (ENSOCUG00000024864) ENSOCUG00000010498 #26 KCNE2 (ENSOCUG00000024647) SLC5A3 (ENSOCUG00000025692) ATP5PO (ENSOCUG00000003895) ITSN1 (ENSOCUG00000003886) CRYZL1 (ENSOCUG00000003881) DONSON (ENSOCUG00000003875) SON (ENSOCUG00000003867) GART (ENSOCUG00000003857) DNAJC28 (ENSOCUG00000003853) TMEM50B (ENSOCUG00000005069) IFNGR2 (ENSOCUG00000002815) Pika MODERN SPECIES 9021 ENSOPRG00000019200 RUNX1 (ENSOPRG00000000765) #22 Rodentia ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Rodentia_B ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Myomorpha ANCESTRAL SPECIES 14 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Muroidea ANCESTRAL SPECIES 11 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Muroidea_A ANCESTRAL SPECIES 17 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.pc.b ENSGT00510000046499.pc.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Cricetidae ANCESTRAL SPECIES 16 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.pc.b ENSGT00510000046499.pc.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Cricetinae ANCESTRAL SPECIES 10 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.pc.b ENSGT00510000046499.pc.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b ENSGT00940000155131 Chinese hamster chok1gshd MODERN SPECIES 382 Dyrk1a (ENSCGRG00001000504) Vps26c (ENSCGRG00001014527) Ttc3 (ENSCGRG00001022857) ENSCGRG00001016611 Ripply3 (ENSCGRG00001015129) Hlcs (ENSCGRG00001019608) Sim2 (ENSCGRG00001015882) Cldn14 (ENSCGRG00001011829) Chaf1b (ENSCGRG00001012715) Morc3 (ENSCGRG00001017226) Dop1b (ENSCGRG00001018448) Cbr3 (ENSCGRG00001016506) ENSCGRG00001013790 ENSCGRG00001008734 Setd4 (ENSCGRG00001017626) Runx1 (ENSCGRG00001019642) #22 Clic6 (ENSCGRG00001009695) #23 RCAN1 (ENSCGRG00001011944) #24 Kcne1 (ENSCGRG00001009489) Fam243 (ENSCGRG00001007822) Smim11 (ENSCGRG00001007254) #26 Kcne2 (ENSCGRG00001001717) Mrps6 (ENSCGRG00001004615) Atp5o (ENSCGRG00001017879) Itsn1 (ENSCGRG00001009613) Cryzl1 (ENSCGRG00001000602) Donson (ENSCGRG00001010184) Son (ENSCGRG00001016220) Gart (ENSCGRG00001016948) Dnajc28 (ENSCGRG00001009807) Tmem50b (ENSCGRG00001020224) Cricetidae_B ANCESTRAL SPECIES 13 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.pc.b ENSGT00510000046499.qc ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Prairie vole MODERN SPECIES 7 Ripply3 (ENSMOCG00000018664) ENSMOCG00000005338 Hlcs (ENSMOCG00000021140) Sim2 (ENSMOCG00000009487) Cldn14 (ENSMOCG00000014070) Chaf1b (ENSMOCG00000016730) Morc3 (ENSMOCG00000013833) ENSMOCG00000010249 Dop1b (ENSMOCG00000016858) Cbr3 (ENSMOCG00000014221) ENSMOCG00000022636 ENSMOCG00000003148 ENSMOCG00000012036 ENSMOCG00000014409 Setd4 (ENSMOCG00000001825) Runx1 (ENSMOCG00000010666) #22 ENSMOCG00000008662 #23 Rcan1 (ENSMOCG00000006721) #24 Kcne1 (ENSMOCG00000000979) Fam243 (ENSMOCG00000010427) Smim11 (ENSMOCG00000019388) #26 Kcne2 (ENSMOCG00000002999) Mrps6 (ENSMOCG00000006588) Slc5a3 (ENSMOCG00000002198) Atp5o (ENSMOCG00000013209) Itsn1 (ENSMOCG00000019130) Cryzl1 (ENSMOCG00000021287) Donson (ENSMOCG00000014685) ENSMOCG00000012860 Gart (ENSMOCG00000013615) Dnajc28 (ENSMOCG00000016555) Northern American deer mouse MODERN SPECIES 3 ENSPEMG00000027256 Tmprss2 (ENSPEMG00000007177) Ripk4 (ENSPEMG00000016616) Prdm15 (ENSPEMG00000011962) C2cd2 (ENSPEMG00000014730) Zbtb21 (ENSPEMG00000025526) ENSPEMG00000030407 Morc3 (ENSPEMG00000011221) Dop1b (ENSPEMG00000007073) Cbr3 (ENSPEMG00000018622) ENSPEMG00000018395 ENSPEMG00000029598 ENSPEMG00000012580 Setd4 (ENSPEMG00000008049) ENSPEMG00000030351 Runx1 (ENSPEMG00000006411) #22 Clic6 (ENSPEMG00000023402) #23 Rcan1 (ENSPEMG00000021805) #24 Kcne1 (ENSPEMG00000028921) ENSPEMG00000027965 #25 Fam243 (ENSPEMG00000001798) Smim11 (ENSPEMG00000029101) #26 Kcne2 (ENSPEMG00000008287) Mrps6 (ENSPEMG00000023075) Slc5a3 (ENSPEMG00000027750) ENSPEMG00000023052 Itsn1 (ENSPEMG00000014932) Cryzl1 (ENSPEMG00000000335) Donson (ENSPEMG00000022835) Son (ENSPEMG00000026746) Gart (ENSPEMG00000021620) Murinae ANCESTRAL SPECIES 13 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.pc.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Mus ANCESTRAL SPECIES 13 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.pc.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Mus_A ANCESTRAL SPECIES 18 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.pc.a.f ENSGT00510000046499.pc.a.e ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113.j ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Mus_B ANCESTRAL SPECIES 18 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.qc ENSGT00510000046499.pc.a.e ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113.j ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Mouse MODERN SPECIES 7 Dyrk1a (ENSMUSG00000022897) Vps26c (ENSMUSG00000022898) Ttc3 (ENSMUSG00000040785) Pigp (ENSMUSG00000022940) Ripply3 (ENSMUSG00000022941) Hlcs (ENSMUSG00000040820) Sim2 (ENSMUSG00000062713) Cldn14 (ENSMUSG00000047109) Chaf1b (ENSMUSG00000022945) Morc3 (ENSMUSG00000039456) Dop1b (ENSMUSG00000022946) Cbr3 (ENSMUSG00000022947) Gm5678 (ENSMUSG00000082815) Cbr1 (ENSMUSG00000051483) Setd4 (ENSMUSG00000022948) Runx1 (ENSMUSG00000022952) #22 Clic6 (ENSMUSG00000022949) #23 Rcan1 (ENSMUSG00000022951) #24 Kcne1 (ENSMUSG00000039639) Fam243 (ENSMUSG00000051728) Smim11 (ENSMUSG00000051989) #26 Kcne2 (ENSMUSG00000039672) Slc5a3 (ENSMUSG00000089774) Gm49711 (ENSMUSG00000116930) Mrps6 (ENSMUSG00000039680) Atp5o (ENSMUSG00000022956) Itsn1 (ENSMUSG00000022957) Cryzl1 (ENSMUSG00000058240) Atp5o (ENSMUSG00000116933) Donson (ENSMUSG00000022960) Son (ENSMUSG00000022961) Mus_C ANCESTRAL SPECIES 12 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.qc ENSGT00510000046499.pc.a.e ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113.j ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C spretus MODERN SPECIES 7 Kcnj6 (MGP_SPRETEiJ_G0021899) Dyrk1a (MGP_SPRETEiJ_G0021898) Vps26c (MGP_SPRETEiJ_G0021897) Ttc3 (MGP_SPRETEiJ_G0021896) MGP_SPRETEiJ_G0021895 Ripply3 (MGP_SPRETEiJ_G0021894) Hlcs (MGP_SPRETEiJ_G0021893) Sim2 (MGP_SPRETEiJ_G0021892) Cldn14 (MGP_SPRETEiJ_G0021891) Chaf1b (MGP_SPRETEiJ_G0021890) Morc3 (MGP_SPRETEiJ_G0021889) Dop1b (MGP_SPRETEiJ_G0021888) Cbr3 (MGP_SPRETEiJ_G0021887) Gm5678 (MGP_SPRETEiJ_G0021886) Setd4 (MGP_SPRETEiJ_G0021885) Runx1 (MGP_SPRETEiJ_G0021884) #22 Clic6 (MGP_SPRETEiJ_G0021883) #23 Rcan1 (MGP_SPRETEiJ_G0021882) #24 Kcne1 (MGP_SPRETEiJ_G0021881) Fam243 (MGP_SPRETEiJ_G0021880) Smim11 (MGP_SPRETEiJ_G0021879) #26 Kcne2 (MGP_SPRETEiJ_G0021878) Slc5a3 (MGP_SPRETEiJ_G0021877) Mrps6 (MGP_SPRETEiJ_G0021876) Itsn1 (MGP_SPRETEiJ_G0021875) Cryzl1 (MGP_SPRETEiJ_G0021874) Atp5o (MGP_SPRETEiJ_G0021873) Donson (MGP_SPRETEiJ_G0021872) Son (MGP_SPRETEiJ_G0021871) MGP_SPRETEiJ_G0021870 Dnajc28 (MGP_SPRETEiJ_G0021869) Steppe mouse MODERN SPECIES 3296 Ttc3 (ENSMSIG00000010058) ENSMSIG00000009975 Ripply3 (ENSMSIG00000009954) ENSMSIG00000009933 Hlcs (ENSMSIG00000009840) Sim2 (ENSMSIG00000009813) ENSMSIG00000009798 Cldn14 (ENSMSIG00000009771) Chaf1b (ENSMSIG00000009725) Morc3 (ENSMSIG00000009666) Dop1b (ENSMSIG00000009533) Cbr3 (ENSMSIG00000009504) ENSMSIG00000009477 Cbr1 (ENSMSIG00000009462) Setd4 (ENSMSIG00000009434) Runx1 (ENSMSIG00000009340) #22 Clic6 (ENSMSIG00000009313) #23 ENSMSIG00000009292 Rcan1 (ENSMSIG00000009254) #24 Kcne1 (ENSMSIG00000009232) ENSMSIG00000009207 #25 ENSMSIG00000009205 Smim11 (ENSMSIG00000009192) #26 Kcne2 (ENSMSIG00000009185) ENSMSIG00000009156 Atp5o (ENSMSIG00000009114) ENSMSIG00000009091 Itsn1 (ENSMSIG00000007035) ENSMSIG00000006977 Donson (ENSMSIG00000006924) Son (ENSMSIG00000006576) Ryukyu mouse MODERN SPECIES 7 Kcnj6 (MGP_CAROLIEiJ_G0020993) Dyrk1a (MGP_CAROLIEiJ_G0020992) Vps26c (MGP_CAROLIEiJ_G0020991) Ttc3 (MGP_CAROLIEiJ_G0020990) MGP_CAROLIEiJ_G0020989 Ripply3 (MGP_CAROLIEiJ_G0020988) Hlcs (MGP_CAROLIEiJ_G0020987) Sim2 (MGP_CAROLIEiJ_G0020986) Cldn14 (MGP_CAROLIEiJ_G0020985) MGP_CAROLIEiJ_G0020984 Morc3 (MGP_CAROLIEiJ_G0020983) Dop1b (MGP_CAROLIEiJ_G0020982) Cbr3 (MGP_CAROLIEiJ_G0020981) Cbr1 (MGP_CAROLIEiJ_G0020980) Setd4 (MGP_CAROLIEiJ_G0020979) Runx1 (MGP_CAROLIEiJ_G0020978) #22 Clic6 (MGP_CAROLIEiJ_G0020977) #23 Rcan1 (MGP_CAROLIEiJ_G0020976) #24 Kcne1 (MGP_CAROLIEiJ_G0020975) Fam243 (MGP_CAROLIEiJ_G0020974) Smim11 (MGP_CAROLIEiJ_G0020973) #26 Kcne2 (MGP_CAROLIEiJ_G0020972) Slc5a3 (MGP_CAROLIEiJ_G0020971) Mrps6 (MGP_CAROLIEiJ_G0020970) Itsn1 (MGP_CAROLIEiJ_G0020969) Cryzl1 (MGP_CAROLIEiJ_G0020968) Atp5o (MGP_CAROLIEiJ_G0020967) Donson (MGP_CAROLIEiJ_G0020966) Son (MGP_CAROLIEiJ_G0020965) Gart (MGP_CAROLIEiJ_G0020964) Dnajc28 (MGP_CAROLIEiJ_G0020963) Shrew mouse MODERN SPECIES 3 Kcnj6 (MGP_PahariEiJ_G0016698) Dyrk1a (MGP_PahariEiJ_G0016697) Vps26c (MGP_PahariEiJ_G0016696) MGP_PahariEiJ_G0016695 MGP_PahariEiJ_G0016694 Ripply3 (MGP_PahariEiJ_G0016693) Hlcs (MGP_PahariEiJ_G0016692) Sim2 (MGP_PahariEiJ_G0016691) Cldn14 (MGP_PahariEiJ_G0016690) Chaf1b (MGP_PahariEiJ_G0016689) Morc3 (MGP_PahariEiJ_G0016688) Dop1b (MGP_PahariEiJ_G0016687) Cbr3 (MGP_PahariEiJ_G0016686) MGP_PahariEiJ_G0016685 Setd4 (MGP_PahariEiJ_G0016684) Runx1 (MGP_PahariEiJ_G0016683) #22 Clic6 (MGP_PahariEiJ_G0016682) #23 Rcan1 (MGP_PahariEiJ_G0016681) #24 Kcne1 (MGP_PahariEiJ_G0016680) Fam243 (MGP_PahariEiJ_G0016679) Smim11 (MGP_PahariEiJ_G0016678) #26 Kcne2 (MGP_PahariEiJ_G0016677) Slc5a3 (MGP_PahariEiJ_G0016676) Mrps6 (MGP_PahariEiJ_G0016675) Itsn1 (MGP_PahariEiJ_G0016674) Cryzl1 (MGP_PahariEiJ_G0016673) Atp5o (MGP_PahariEiJ_G0016672) Donson (MGP_PahariEiJ_G0016671) Son (MGP_PahariEiJ_G0016670) Gart (MGP_PahariEiJ_G0016669) Dnajc28 (MGP_PahariEiJ_G0016668) Rat MODERN SPECIES 2 Hlcs (ENSRNOG00000001686) Sim2 (ENSRNOG00000054203) Cldn14 (ENSRNOG00000001691) Chaf1b (ENSRNOG00000001692) Morc3 (ENSRNOG00000026236) Ifitm7 (ENSRNOG00000021674) Dop1b (ENSRNOG00000051204) Cbr3 (ENSRNOG00000001701) LOC100360601 (ENSRNOG00000049693) ENSRNOG00000063617 ENSRNOG00000067558 ENSRNOG00000067486 Cbr1l2 (ENSRNOG00000049911) Setd4 (ENSRNOG00000001699) RGD1562683 (ENSRNOG00000042967) Runx1 (ENSRNOG00000001704) #22 Clic6 (ENSRNOG00000026870) #23 Rcan1 (ENSRNOG00000001979) #24 Kcne1 (ENSRNOG00000001984) C11h21orf140 (ENSRNOG00000001986) Smim11 (ENSRNOG00000039877) #26 Kcne2 (ENSRNOG00000029811) Mrps6 (ENSRNOG00000059381) Slc5a3 (ENSRNOG00000067988) Atp5po (ENSRNOG00000001991) Itsn1 (ENSRNOG00000002001) Cryzl1 (ENSRNOG00000028014) Donson (ENSRNOG00000002012) Son (ENSRNOG00000002021) Gart (ENSRNOG00000028292) Dnajc28 (ENSRNOG00000002026) Upper Galilee mountains blind mole rat MODERN SPECIES 947 Cldn14 (ENSNGAG00000012804) Chaf1b (ENSNGAG00000010147) Morc3 (ENSNGAG00000019866) Dop1b (ENSNGAG00000015918) Cbr3 (ENSNGAG00000020916) ENSNGAG00000000068 Setd4 (ENSNGAG00000018666) Runx1 (ENSNGAG00000018306) #22 ENSNGAG00000015261 #23 Rcan1 (ENSNGAG00000011469) #24 Kcne1 (ENSNGAG00000011940) Smim11 (ENSNGAG00000012901) #26 Kcne2 (ENSNGAG00000014780) Mrps6 (ENSNGAG00000004525) ENSNGAG00000010977 Atp5o (ENSNGAG00000013673) Itsn1 (ENSNGAG00000020162) Cryzl1 (ENSNGAG00000018338) Donson (ENSNGAG00000020262) ENSNGAG00000000062 Gart (ENSNGAG00000008051) Dnajc28 (ENSNGAG00000014152) Tmem50b (ENSNGAG00000014132) Lesser Egyptian jerboa MODERN SPECIES 54 ENSJJAG00000018355 ENSJJAG00000011573 ENSJJAG00000022631 Ripply3 (ENSJJAG00000014562) ENSJJAG00000022662 Sim2 (ENSJJAG00000010920) Cldn14 (ENSJJAG00000012260) Chaf1b (ENSJJAG00000019129) ENSJJAG00000023251 Dop1b (ENSJJAG00000014829) Cbr3 (ENSJJAG00000011377) ENSJJAG00000011763 ENSJJAG00000005707 Setd4 (ENSJJAG00000014783) ENSJJAG00000024188 Runx1 (ENSJJAG00000021612) #22 Clic6 (ENSJJAG00000005200) #23 Rcan1 (ENSJJAG00000019296) #24 Smim11 (ENSJJAG00000023396) #26 Kcne2 (ENSJJAG00000012109) ENSJJAG00000011881 Mrps6 (ENSJJAG00000019018) Slc5a3 (ENSJJAG00000011192) Atp5o (ENSJJAG00000022394) Itsn1 (ENSJJAG00000015504) Cryzl1 (ENSJJAG00000007775) Donson (ENSJJAG00000015212) ENSJJAG00000013491 Gart (ENSJJAG00000022118) Tmem50b (ENSJJAG00000020263) Ifngr2 (ENSJJAG00000000609) Kangaroo rat MODERN SPECIES 423 ENSDORG00000030164 Vps26c (ENSDORG00000008988) ENSDORG00000028545 ENSDORG00000029044 Pigp (ENSDORG00000005758) Ripply3 (ENSDORG00000006654) ENSDORG00000025735 Sim2 (ENSDORG00000011548) Cldn14 (ENSDORG00000016397) Chaf1b (ENSDORG00000012470) Morc3 (ENSDORG00000007125) Dop1b (ENSDORG00000002645) Cbr3 (ENSDORG00000003691) ENSDORG00000003690 Setd4 (ENSDORG00000014210) Runx1 (ENSDORG00000004347) #22 Rcan1 (ENSDORG00000000423) #24 Kcne1 (ENSDORG00000026312) Smim11 (ENSDORG00000026932) #26 Kcne2 (ENSDORG00000000777) Mrps6 (ENSDORG00000028219) Atp5o (ENSDORG00000004766) ENSDORG00000025422 Itsn1 (ENSDORG00000004764) Cryzl1 (ENSDORG00000011832) Donson (ENSDORG00000011831) ENSDORG00000028617 Gart (ENSDORG00000011828) Dnajc28 (ENSDORG00000029799) Tmem50b (ENSDORG00000026709) ENSDORG00000029093 Rodentia_A ANCESTRAL SPECIES 5 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Sciuridae ANCESTRAL SPECIES 12 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Marmotini ANCESTRAL SPECIES 13 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Marmotini_b ANCESTRAL SPECIES 30 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Arctic ground squirrel MODERN SPECIES 121 ENSUPAG00010002996 SETD4 (ENSUPAG00010002984) RUNX1 (ENSUPAG00010002899) #22 CLIC6 (ENSUPAG00010002894) #23 RCAN1 (ENSUPAG00010002868) #24 KCNE1 (ENSUPAG00010002860) SMIM34 (ENSUPAG00010002850) #25 C21orf140 (ENSUPAG00010002842) SMIM11 (ENSUPAG00010002833) #26 KCNE2 (ENSUPAG00010002823) MRPS6 (ENSUPAG00010002819) ATP5PO (ENSUPAG00010002809) ITSN1 (ENSUPAG00010002517) CRYZL1 (ENSUPAG00010002392) DONSON (ENSUPAG00010002359) SON (ENSUPAG00010002114) GART (ENSUPAG00010002059) DNAJC28 (ENSUPAG00010002056) Squirrel MODERN SPECIES 100 ERG (ENSSTOG00000025814) KCNJ15 (ENSSTOG00000000052) KCNJ6 (ENSSTOG00000016154) DYRK1A (ENSSTOG00000016151) ENSSTOG00000020762 ENSSTOG00000004274 PIGP (ENSSTOG00000010943) ENSSTOG00000031463 HLCS (ENSSTOG00000015476) CLDN14 (ENSSTOG00000023003) CHAF1B (ENSSTOG00000001427) MORC3 (ENSSTOG00000028859) DOP1B (ENSSTOG00000003970) CBR3 (ENSSTOG00000012790) SETD4 (ENSSTOG00000013526) RUNX1 (ENSSTOG00000020082) #22 CLIC6 (ENSSTOG00000014035) #23 RCAN1 (ENSSTOG00000020439) #24 KCNE1 (ENSSTOG00000020255) SMIM11 (ENSSTOG00000030093) #26 KCNE2 (ENSSTOG00000022170) MRPS6 (ENSSTOG00000028147) ENSSTOG00000014257 ATP5PO (ENSSTOG00000008658) ITSN1 (ENSSTOG00000027506) CRYZL1 (ENSSTOG00000008756) DONSON (ENSSTOG00000008739) SON (ENSSTOG00000020593) GART (ENSSTOG00000008673) DNAJC28 (ENSSTOG00000023797) TMEM50B (ENSSTOG00000023740) Alpin marmot MODERN SPECIES 4 KCNJ6 (ENSMMMG00000003548) DYRK1A (ENSMMMG00000003463) VPS26C (ENSMMMG00000003435) TTC3 (ENSMMMG00000003016) PIGP (ENSMMMG00000002981) ENSMMMG00000002971 ENSMMMG00000002958 CLDN14 (ENSMMMG00000002911) CHAF1B (ENSMMMG00000002837) MORC3 (ENSMMMG00000002800) DOP1B (ENSMMMG00000002673) CBR3 (ENSMMMG00000002648) ENSMMMG00000002635 ENSMMMG00000002598 SETD4 (ENSMMMG00000002557) RUNX1 (ENSMMMG00000002495) #22 ENSMMMG00000002457 #23 RCAN1 (ENSMMMG00000002440) #24 KCNE1 (ENSMMMG00000002437) SMIM34 (ENSMMMG00000002423) #25 C21orf140 (ENSMMMG00000002422) SMIM11 (ENSMMMG00000002410) #26 KCNE2 (ENSMMMG00000002406) MRPS6 (ENSMMMG00000002370) SLC5A3 (ENSMMMG00000002363) ATP5PO (ENSMMMG00000002354) ITSN1 (ENSMMMG00000001492) CRYZL1 (ENSMMMG00000001338) DONSON (ENSMMMG00000001308) SON (ENSMMMG00000001137) GART (ENSMMMG00000001006) Eurasian red squirrel MODERN SPECIES 1 DYRK1A (ENSSVLG00005019571) ENSSVLG00005019993 ENSSVLG00005019788 ENSSVLG00005020036 ENSSVLG00005020080 ENSSVLG00005020110 ENSSVLG00005020331 SIM2 (ENSSVLG00005020374) CLDN14 (ENSSVLG00005020475) CHAF1B (ENSSVLG00005020497) MORC3 (ENSSVLG00005020603) DOP1B (ENSSVLG00005020661) CBR3 (ENSSVLG00005020949) CBR1 (ENSSVLG00005020974) SETD4 (ENSSVLG00005020996) RUNX1 (ENSSVLG00005021041) #22 ENSSVLG00005021276 #23 RCAN1 (ENSSVLG00005021452) #24 KCNE1 (ENSSVLG00005021515) SMIM34 (ENSSVLG00005021531) #25 C21orf140 (ENSSVLG00005021560) SMIM11 (ENSSVLG00005021582) #26 KCNE2 (ENSSVLG00005021605) ENSSVLG00005021622 ENSSVLG00005021648 ITSN1 (ENSSVLG00005022114) ENSSVLG00005024081 CRYZL1 (ENSSVLG00005024121) DONSON (ENSSVLG00005024191) ENSSVLG00005024353 ENSSVLG00005024374 Hystricomorpha ANCESTRAL SPECIES 18 ENSGT00940000154465.C.w ENSGT00390000013771.bb ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.hc ENSGT00940000155686.n.a ENSGT00510000046499.ic.b ENSGT00510000046499.ic.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Hystricomorpha_a ANCESTRAL SPECIES 37 ENSGT00940000154465.C.w ENSGT00390000013771.bb ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.hc ENSGT00940000155686.n.a ENSGT00510000046499.ic.b ENSGT00510000046499.ic.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b ENSGT00940000155131 Hystricomorpha_b ANCESTRAL SPECIES 34 ENSGT00940000154465.C.w ENSGT00390000013771.bb ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.hc ENSGT00940000155686.n.a ENSGT00510000046499.ic.b ENSGT00510000046499.ic.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b ENSGT00940000155131 Long-tailed chinchilla MODERN SPECIES 114 ENSCLAG00000008569 ENSCLAG00000006455 ENSCLAG00000006237 HLCS (ENSCLAG00000004714) SIM2 (ENSCLAG00000012698) CLDN14 (ENSCLAG00000009427) CHAF1B (ENSCLAG00000007456) MORC3 (ENSCLAG00000006634) DOP1B (ENSCLAG00000005290) CBR3 (ENSCLAG00000008082) ENSCLAG00000007319 ENSCLAG00000006403 ENSCLAG00000005921 ENSCLAG00000007937 SETD4 (ENSCLAG00000007338) RUNX1 (ENSCLAG00000006601) #22 ENSCLAG00000005925 #23 RCAN1 (ENSCLAG00000005528) #24 KCNE1 (ENSCLAG00000006051) SMIM11 (ENSCLAG00000005628) #26 KCNE2 (ENSCLAG00000017585) ENSCLAG00000004700 MRPS6 (ENSCLAG00000004549) ENSCLAG00000009143 ATP5PO (ENSCLAG00000008699) ITSN1 (ENSCLAG00000006733) CRYZL1 (ENSCLAG00000008149) DONSON (ENSCLAG00000007407) SON (ENSCLAG00000011776) GART (ENSCLAG00000012152) DNAJC28 (ENSCLAG00000017655) Degu MODERN SPECIES 102 ENSODEG00000004414 SIM2 (ENSODEG00000004360) ENSODEG00000004338 CLDN14 (ENSODEG00000019107) CHAF1B (ENSODEG00000003979) MORC3 (ENSODEG00000003893) DOP1B (ENSODEG00000003556) CBR3 (ENSODEG00000003510) ENSODEG00000003389 ENSODEG00000003903 ENSODEG00000003861 ENSODEG00000018987 ENSODEG00000003798 ENSODEG00000003789 SETD4 (ENSODEG00000003713) RUNX1 (ENSODEG00000003627) #22 ENSODEG00000003541 #23 RCAN1 (ENSODEG00000003513) #24 KCNE1 (ENSODEG00000018984) SMIM11 (ENSODEG00000003453) #26 KCNE2 (ENSODEG00000019154) Guinea pig MODERN SPECIES 146 ENSCPOG00000034340 ENSCPOG00000009301 SETD4 (ENSCPOG00000003747) RUNX1 (ENSCPOG00000032411) #22 ENSCPOG00000034487 #23 RCAN1 (ENSCPOG00000033473) #24 KCNE1 (ENSCPOG00000037389) KCNE2 (ENSCPOG00000036840) SMIM11 (ENSCPOG00000005591) #26 MRPS6 (ENSCPOG00000036980) SLC5A3 (ENSCPOG00000025098) ENSCPOG00000033219 ATP5PO (ENSCPOG00000000710) ITSN1 (ENSCPOG00000000709) CRYZL1 (ENSCPOG00000004843) DONSON (ENSCPOG00000004837) SON (ENSCPOG00000024278) GART (ENSCPOG00000005160) DNAJC28 (ENSCPOG00000006431) Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000042854 ENSHGLG00000034155 ENSHGLG00000013690 GET1 (ENSHGLG00000012972) ENSHGLG00000015714 ENSHGLG00000044589 SH3BGR (ENSHGLG00000015469) ENSHGLG00000040175 ENSHGLG00000015085 ENSHGLG00000045024 ENSHGLG00000014926 ENSHGLG00000033972 ENSHGLG00000038478 ENSHGLG00000015303 ENSHGLG00000014759 ENSHGLG00000040770 #22 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT01100000263796 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000159255 #22 Common shrew MODERN SPECIES 4055 RUNX1 (ENSSARG00000001700) #22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a.g.b ENSGT00510000046499.`c.a.g.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Carnivora ANCESTRAL SPECIES 10 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a.g.b ENSGT00510000046499.`c.a.g.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Felidae ANCESTRAL SPECIES 9 ENSGT00940000154465.C ENSGT00390000013771.o.b ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.g.b.e.b ENSGT00510000046499.`c.a.g.b.e.a.a ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a.g.b.f ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Cat MODERN SPECIES 240 ENSFCAG00000043461 ENSFCAG00000038780 RIPPLY3 (ENSFCAG00000043170) HLCS (ENSFCAG00000002943) SIM2 (ENSFCAG00000023063) CLDN14 (ENSFCAG00000002942) CHAF1B (ENSFCAG00000002941) MORC3 (ENSFCAG00000002940) DOP1B (ENSFCAG00000002935) CBR3 (ENSFCAG00000035695) ENSFCAG00000032402 ENSFCAG00000009295 ENSFCAG00000023641 SETD4 (ENSFCAG00000009292) ENSFCAG00000039503 RUNX1 (ENSFCAG00000006761) #22 CLIC6 (ENSFCAG00000006760) #23 RCAN1 (ENSFCAG00000041249) #24 KCNE1 (ENSFCAG00000006759) SMIM34 (ENSFCAG00000046388) #25 C21orf140 (ENSFCAG00000040735) SMIM11 (ENSFCAG00000046320) #26 KCNE2 (ENSFCAG00000006757) MRPS6 (ENSFCAG00000035307) ATP5PO (ENSFCAG00000028656) ITSN1 (ENSFCAG00000010344) CRYZL1 (ENSFCAG00000029072) DONSON (ENSFCAG00000019250) SON (ENSFCAG00000028680) GART (ENSFCAG00000009327) DNAJC28 (ENSFCAG00000009324) Panthera ANCESTRAL SPECIES 17 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.g.b.e.b ENSGT00510000046499.`c.a.g.b.e.a.a ENSGT00510000046499.`c.a.g.b.e.a.b ENSGT00510000046499.`c.a.g.a ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a.g.b.f ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Tiger MODERN SPECIES 321 ENSPTIG00000014304 PIGP (ENSPTIG00000012877) RIPPLY3 (ENSPTIG00000012747) HLCS (ENSPTIG00000011329) SIM2 (ENSPTIG00000010539) ENSPTIG00000005477 CHAF1B (ENSPTIG00000009098) MORC3 (ENSPTIG00000007503) DOP1B (ENSPTIG00000005131) CBR3 (ENSPTIG00000003800) ENSPTIG00000021695 ENSPTIG00000020528 ENSPTIG00000016037 ENSPTIG00000015655 SETD4 (ENSPTIG00000009739) ENSPTIG00000009461 #22 ENSPTIG00000008502 #23 RCAN1 (ENSPTIG00000007116) #24 KCNE1 (ENSPTIG00000005187) SMIM34 (ENSPTIG00000006496) #25 C21orf140 (ENSPTIG00000005178) SMIM11 (ENSPTIG00000003688) #26 KCNE2 (ENSPTIG00000005157) MRPS6 (ENSPTIG00000000875) ATP5PO (ENSPTIG00000021561) ITSN1 (ENSPTIG00000009965) CRYZL1 (ENSPTIG00000021991) DONSON (ENSPTIG00000021107) SON (ENSPTIG00000017100) GART (ENSPTIG00000011525) TMEM50B (ENSPTIG00000010055) Panthera_a ANCESTRAL SPECIES 21 ENSGT00390000013771.o.b ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.g.b.e.b ENSGT00510000046499.`c.a.g.b.e.a.a ENSGT00510000046499.`c.a.g.b.e.a.b ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a.g.b.f ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b lion MODERN SPECIES 9 VPS26C (ENSPLOG00000010027) ENSPLOG00000009977 ENSPLOG00000009872 ENSPLOG00000009813 ENSPLOG00000009707 RIPPLY3 (ENSPLOG00000009670) HLCS (ENSPLOG00000009617) SIM2 (ENSPLOG00000009477) CLDN14 (ENSPLOG00000009438) CHAF1B (ENSPLOG00000009389) MORC3 (ENSPLOG00000009284) DOP1B (ENSPLOG00000009227) CBR3 (ENSPLOG00000009190) ENSPLOG00000009157 SETD4 (ENSPLOG00000009091) RUNX1 (ENSPLOG00000008879) #22 ENSPLOG00000008696 #23 RCAN1 (ENSPLOG00000008650) #24 KCNE1 (ENSPLOG00000008622) SMIM34 (ENSPLOG00000008603) #25 C21orf140 (ENSPLOG00000008586) SMIM11 (ENSPLOG00000008562) #26 KCNE2 (ENSPLOG00000008542) MRPS6 (ENSPLOG00000008512) ATP5PO (ENSPLOG00000008453) ITSN1 (ENSPLOG00000008176) CRYZL1 (ENSPLOG00000007860) DONSON (ENSPLOG00000007766) SON (ENSPLOG00000007662) GART (ENSPLOG00000007620) DNAJC28 (ENSPLOG00000007606) leopard MODERN SPECIES 81 HLCS (ENSPPRG00000008534) SIM2 (ENSPPRG00000008583) CLDN14 (ENSPPRG00000019999) CHAF1B (ENSPPRG00000008804) MORC3 (ENSPPRG00000008818) DOP1B (ENSPPRG00000008905) CBR3 (ENSPPRG00000009031) ENSPPRG00000009207 ENSPPRG00000009305 ENSPPRG00000010032 ENSPPRG00000010580 ENSPPRG00000010592 ENSPPRG00000010621 SETD4 (ENSPPRG00000010682) ENSPPRG00000010694 RUNX1 (ENSPPRG00000010999) #22 ENSPPRG00000011057 #23 RCAN1 (ENSPPRG00000011156) #24 KCNE1 (ENSPPRG00000020172) SMIM34 (ENSPPRG00000011224) #25 C21orf140 (ENSPPRG00000020192) SMIM11 (ENSPPRG00000011681) #26 KCNE2 (ENSPPRG00000020210) MRPS6 (ENSPPRG00000011728) ATP5PO (ENSPPRG00000011761) ITSN1 (ENSPPRG00000014403) CRYZL1 (ENSPPRG00000015354) DONSON (ENSPPRG00000018486) SON (ENSPPRG00000019353) GART (ENSPPRG00000021685) TMEM50B (ENSPPRG00000022308) Caniformia ANCESTRAL SPECIES ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a.g.b ENSGT00510000046499.`c.a.g.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.e.a ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Caniformia_b ANCESTRAL SPECIES ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a.g.b ENSGT00510000046499.`c.a.g.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.e.a ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Mustelinae ANCESTRAL SPECIES 90 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060.e.a ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C American mink MODERN SPECIES 26 RUNX1 (ENSNVIG00000007077) #22 ENSNVIG00000007035 #23 RCAN1 (ENSNVIG00000007009) #24 KCNE1 (ENSNVIG00000006986) SMIM34 (ENSNVIG00000006979) #25 C21orf140 (ENSNVIG00000006967) SMIM11 (ENSNVIG00000006936) #26 KCNE2 (ENSNVIG00000006931) MRPS6 (ENSNVIG00000006925) ENSNVIG00000006916 ITSN1 (ENSNVIG00000006241) CRYZL1 (ENSNVIG00000006122) DONSON (ENSNVIG00000006058) SON (ENSNVIG00000005985) GART (ENSNVIG00000005873) DNAJC28 (ENSNVIG00000005859) Ferret MODERN SPECIES 219 ENSMPUG00000001343 RUNX1 (ENSMPUG00000001340) #22 CLIC6 (ENSMPUG00000001338) #23 RCAN1 (ENSMPUG00000001337) #24 KCNE1 (ENSMPUG00000001333) C21orf140 (ENSMPUG00000019231) KCNE2 (ENSMPUG00000019225) MRPS6 (ENSMPUG00000001330) ATP5PO (ENSMPUG00000001319) ENSMPUG00000001317 ITSN1 (ENSMPUG00000001311) CRYZL1 (ENSMPUG00000001310) DONSON (ENSMPUG00000001294) SON (ENSMPUG00000001290) GART (ENSMPUG00000001284) DNAJC28 (ENSMPUG00000019222) TMEM50B (ENSMPUG00000001283) Ursidae ANCESTRAL SPECIES 1 ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.g.b.b ENSGT00510000046499.`c.b.a.a.b ENSGT00510000046499.`c.b.a.a.a ENSGT00510000046499.`c.a.g.b.a ENSGT00510000046499.`c.a.g.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.e.a ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141.b Giant Panda MODERN SPECIES ENSAMEG00000029134 KCNJ6 (ENSAMEG00000018222) DYRK1A (ENSAMEG00000018223) VPS26C (ENSAMEG00000009425) ENSAMEG00000028137 HLCS (ENSAMEG00000005602) SIM2 (ENSAMEG00000005588) CLDN14 (ENSAMEG00000018735) CHAF1B (ENSAMEG00000005560) MORC3 (ENSAMEG00000005512) DOP1B (ENSAMEG00000005447) CBR3 (ENSAMEG00000005441) ENSAMEG00000005440 ENSAMEG00000028070 SETD4 (ENSAMEG00000005370) RUNX1 (ENSAMEG00000005325) #22 CLIC6 (ENSAMEG00000028082) #23 RCAN1 (ENSAMEG00000005295) #24 KCNE1 (ENSAMEG00000018725) SMIM34 (ENSAMEG00000025048) #25 C21orf140 (ENSAMEG00000018721) ENSAMEG00000019455 #26 KCNE2 (ENSAMEG00000019465) MRPS6 (ENSAMEG00000014707) SLC5A3 (ENSAMEG00000019486) ENSAMEG00000014708 ITSN1 (ENSAMEG00000014724) CRYZL1 (ENSAMEG00000014840) DONSON (ENSAMEG00000014866) SON (ENSAMEG00000027111) GART (ENSAMEG00000014882) Ursus ANCESTRAL SPECIES ENSGT00940000159255 #22 American black bear MODERN SPECIES 1410 RUNX1 (ENSUAMG00000016714) #22 Canidae ANCESTRAL SPECIES 39 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.g.b.c ENSGT00510000046499.`c.a.g.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.e.a.a ENSGT00940000164632.b ENSGT00390000015060.e.a.b.a ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 Canis_lupus ANCESTRAL SPECIES 38 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.g.b.c ENSGT00510000046499.`c.a.g.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060.e.a.b.a ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Dingo MODERN SPECIES 328 ENSCAFG00020024394 ENSCAFG00020024400 ENSCAFG00020024407 ENSCAFG00020024422 SIM2 (ENSCAFG00020024427) CLDN14 (ENSCAFG00020024431) CHAF1B (ENSCAFG00020024433) MORC3 (ENSCAFG00020024440) DOP1B (ENSCAFG00020024481) CBR3 (ENSCAFG00020024542) ENSCAFG00020024547 ENSCAFG00020024555 ENSCAFG00020024559 ENSCAFG00020024567 SETD4 (ENSCAFG00020024575) RUNX1 (ENSCAFG00020024585) #22 ENSCAFG00020024587 #23 RCAN1 (ENSCAFG00020024591) #24 KCNE1 (ENSCAFG00020024593) SMIM34 (ENSCAFG00020024594) #25 C21orf140 (ENSCAFG00020024597) SMIM11 (ENSCAFG00020024598) #26 KCNE2 (ENSCAFG00020024600) MRPS6 (ENSCAFG00020024603) ENSCAFG00020024604 ITSN1 (ENSCAFG00020024637) CRYZL1 (ENSCAFG00020025281) DONSON (ENSCAFG00020025283) SON (ENSCAFG00020025305) GART (ENSCAFG00020025345) DNAJC28 (ENSCAFG00020025626) Dog MODERN SPECIES 24 ENSCAFG00845028884 DYRK1A (ENSCAFG00845028759) VPS26C (ENSCAFG00845028583) TTC3 (ENSCAFG00845028091) ENSCAFG00845027926 RIPPLY3 (ENSCAFG00845027840) HLCS (ENSCAFG00845027738) SIM2 (ENSCAFG00845027660) CLDN14 (ENSCAFG00845027623) CHAF1B (ENSCAFG00845027567) MORC3 (ENSCAFG00845027494) DOP1B (ENSCAFG00845027299) CBR3 (ENSCAFG00845027234) CBR1 (ENSCAFG00845027033) SETD4 (ENSCAFG00845026541) RUNX1 (ENSCAFG00845026139) #22 CLIC6 (ENSCAFG00845026057) #23 RCAN1 (ENSCAFG00845025941) #24 ENSCAFG00845025908 SMIM34 (ENSCAFG00845025877) #25 FAM243A (ENSCAFG00845025855) SMIM11A (ENSCAFG00845025824) #26 KCNE2 (ENSCAFG00845025778) SLC5A3 (ENSCAFG00845025693) ENSCAFG00845025650 ATP5O (ENSCAFG00845025556) ITSN1 (ENSCAFG00845024761) CRYZL1 (ENSCAFG00845024398) DONSON (ENSCAFG00845024267) SON (ENSCAFG00845024089) GART (ENSCAFG00845027175) Red fox MODERN SPECIES 227 CLDN14 (ENSVVUG00000020105) CHAF1B (ENSVVUG00000020088) MORC3 (ENSVVUG00000020082) DOP1B (ENSVVUG00000020049) CBR3 (ENSVVUG00000020044) ENSVVUG00000020041 ENSVVUG00000020038 ENSVVUG00000020030 SETD4 (ENSVVUG00000020027) ENSVVUG00000020012 #22 ENSVVUG00000019996 #23 RCAN1 (ENSVVUG00000019990) #24 KCNE1 (ENSVVUG00000019989) SMIM34 (ENSVVUG00000019985) #25 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.h ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Equus ANCESTRAL SPECIES 42 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.h.b ENSGT00940000153577.A ENSGT00940000155433.q.b ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Horse MODERN SPECIES 18 MORC3 (ENSECAG00000015098) DOP1B (ENSECAG00000022735) ENSECAG00000034330 ENSECAG00000052900 ENSECAG00000022317 ENSECAG00000058788 ENSECAG00000036989 ENSECAG00000033278 ENSECAG00000019269 ENSECAG00000057410 ENSECAG00000049959 ENSECAG00000046612 ENSECAG00000059265 SETD4 (ENSECAG00000015490) ENSECAG00000035931 RUNX1 (ENSECAG00000003462) #22 CLIC6 (ENSECAG00000016891) #23 RCAN1 (ENSECAG00000014787) #24 KCNE1 (ENSECAG00000004065) SMIM34 (ENSECAG00000040618) #25 C21orf140 (ENSECAG00000003977) SMIM11 (ENSECAG00000003617) #26 KCNE2 (ENSECAG00000042684) SLC5A3 (ENSECAG00000059657) MRPS6 (ENSECAG00000012603) ATP5PO (ENSECAG00000009059) ITSN1 (ENSECAG00000012054) CRYZL1 (ENSECAG00000010985) ENSECAG00000051547 DONSON (ENSECAG00000007826) SON (ENSECAG00000018098) Donkey MODERN SPECIES 9 ENSEASG00005025788 RIPPLY3 (ENSEASG00005033801) HLCS (ENSEASG00005006090) SIM2 (ENSEASG00005006092) CLDN14 (ENSEASG00005006099) CHAF1B (ENSEASG00005006101) MORC3 (ENSEASG00005006105) DOP1B (ENSEASG00005006113) CBR3 (ENSEASG00005006117) ENSEASG00005006123 ENSEASG00005027645 ENSEASG00005006118 ENSEASG00005006120 SETD4 (ENSEASG00005006128) ENSEASG00005032167 RUNX1 (ENSEASG00005006136) #22 ENSEASG00005006145 #23 RCAN1 (ENSEASG00005026146) #24 SMIM34 (ENSEASG00005029746) #25 C21orf140 (ENSEASG00005006157) SMIM11 (ENSEASG00005006158) #26 KCNE2 (ENSEASG00005006159) MRPS6 (ENSEASG00005006162) SLC5A3 (ENSEASG00005033272) ATP5PO (ENSEASG00005006166) ITSN1 (ENSEASG00005006171) CRYZL1 (ENSEASG00005006175) DONSON (ENSEASG00005006187) SON (ENSEASG00005023818) GART (ENSEASG00005006197) DNAJC28 (ENSEASG00005006199) Chiroptera ANCESTRAL SPECIES 35 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.h ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Megabat MODERN SPECIES 1641 RUNX1 (ENSPVAG00000001606) #22 Microchiroptera ANCESTRAL SPECIES 37 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.h ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Greater horseshoe bat MODERN SPECIES 11 VPS26C (ENSRFEG00010002992) TTC3 (ENSRFEG00010002881) PIGP (ENSRFEG00010002809) ENSRFEG00010002789 HLCS (ENSRFEG00010002742) SIM2 (ENSRFEG00010002703) CLDN14 (ENSRFEG00010002684) CHAF1B (ENSRFEG00010002654) MORC3 (ENSRFEG00010002615) ENSRFEG00010002587 ENSRFEG00010002568 CBR1 (ENSRFEG00010002545) ENSRFEG00010002528 CBR3 (ENSRFEG00010002511) SETD4 (ENSRFEG00010002440) RUNX1 (ENSRFEG00010002321) #22 CLIC6 (ENSRFEG00010002272) #23 RCAN1 (ENSRFEG00010002247) #24 ENSRFEG00010002227 KCNE1 (ENSRFEG00010002214) SMIM34 (ENSRFEG00010002205) #25 C21orf140 (ENSRFEG00010002191) SMIM11 (ENSRFEG00010002173) #26 KCNE2 (ENSRFEG00010002139) MRPS6 (ENSRFEG00010002120) ATP5PO (ENSRFEG00010002083) ITSN1 (ENSRFEG00010001761) CRYZL1 (ENSRFEG00010001511) DONSON (ENSRFEG00010001397) SON (ENSRFEG00010001283) GART (ENSRFEG00010001125) Microbat MODERN SPECIES 1722 RUNX1 (ENSMLUG00000005802) #22 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.l ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Suina ANCESTRAL SPECIES 35 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.b ENSGT00510000046499.`c.a.b ENSGT00510000046499.`c.a.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.k.a ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Pig MODERN SPECIES 4 SIM2 (ENSSSCG00000027179) CLDN14 (ENSSSCG00000020680) CHAF1B (ENSSSCG00000012056) MORC3 (ENSSSCG00000012055) DOP1B (ENSSSCG00000012054) CBR3 (ENSSSCG00000012053) ENSSSCG00000035405 ENSSSCG00000057140 ENSSSCG00000052860 ENSSSCG00000062639 ENSSSCG00000060427 CBR1 (ENSSSCG00000031111) ENSSSCG00000020706 SETD4 (ENSSSCG00000028883) ENSSSCG00000034933 RUNX1 (ENSSSCG00000035537) #22 ENSSSCG00000012052 CLIC6 (ENSSSCG00000028112) #23 ENSSSCG00000044244 RCAN1 (ENSSSCG00000012050) #24 KCNE1 (ENSSSCG00000012049) SMIM34 (ENSSSCG00000057115) #25 C21orf140 (ENSSSCG00000062452) SMIM11 (ENSSSCG00000012046) #26 KCNE2 (ENSSSCG00000055615) MRPS6 (ENSSSCG00000026981) SLC5A3 (ENSSSCG00000034167) ATP5PO (ENSSSCG00000012042) ENSSSCG00000055987 ITSN1 (ENSSSCG00000024614) CRYZL1 (ENSSSCG00000028377) Chacoan peccary MODERN SPECIES 99 VPS26C (ENSCWAG00000009347) TTC3 (ENSCWAG00000008763) PIGP (ENSCWAG00000008564) RIPPLY3 (ENSCWAG00000008511) HLCS (ENSCWAG00000008482) SIM2 (ENSCWAG00000008373) CLDN14 (ENSCWAG00000008352) CHAF1B (ENSCWAG00000008229) MORC3 (ENSCWAG00000008171) DOP1B (ENSCWAG00000007799) CBR3 (ENSCWAG00000003335) ENSCWAG00000003327 ENSCWAG00000003319 SETD4 (ENSCWAG00000003308) ENSCWAG00000003295 RUNX1 (ENSCWAG00000003243) #22 CLIC6 (ENSCWAG00000003138) #23 RCAN1 (ENSCWAG00000003081) #24 KCNE1 (ENSCWAG00000003072) SMIM34 (ENSCWAG00000003064) #25 ENSCWAG00000003061 C21orf140 (ENSCWAG00000003054) SMIM11 (ENSCWAG00000003045) #26 KCNE2 (ENSCWAG00000003038) MRPS6 (ENSCWAG00000003022) ATP5PO (ENSCWAG00000002999) ITSN1 (ENSCWAG00000002936) CRYZL1 (ENSCWAG00000002883) DONSON (ENSCWAG00000002852) ENSCWAG00000002805 GART (ENSCWAG00000002777) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.l ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Camelidae ANCESTRAL SPECIES ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.k.a ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Arabian camel MODERN SPECIES DYRK1A (ENSCDRG00005007271) VPS26C (ENSCDRG00005006994) TTC3 (ENSCDRG00005006786) ENSCDRG00005006635 RIPPLY3 (ENSCDRG00005006597) HLCS (ENSCDRG00005006543) SIM2 (ENSCDRG00005006306) CLDN14 (ENSCDRG00005003192) CHAF1B (ENSCDRG00005003178) MORC3 (ENSCDRG00005003156) DOP1B (ENSCDRG00005003137) CBR3 (ENSCDRG00005003119) ENSCDRG00005003078 ENSCDRG00005003062 SETD4 (ENSCDRG00005003030) RUNX1 (ENSCDRG00005002943) #22 ENSCDRG00005002909 #23 RCAN1 (ENSCDRG00005002885) #24 KCNE1 (ENSCDRG00005002874) SMIM34 (ENSCDRG00005002867) #25 C21orf140 (ENSCDRG00005002856) SMIM11 (ENSCDRG00005002839) #26 KCNE2 (ENSCDRG00005002833) ENSCDRG00005002819 ATP5PO (ENSCDRG00005002800) ITSN1 (ENSCDRG00005002725) CRYZL1 (ENSCDRG00005002635) DONSON (ENSCDRG00005002585) SON (ENSCDRG00005002558) GART (ENSCDRG00005002522) DNAJC28 (ENSCDRG00005002507) Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.l ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Cetacea ANCESTRAL SPECIES 10 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.l ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Blue whale MODERN SPECIES 15 PIGP (ENSBMSG00010004522) ENSBMSG00010004502 HLCS (ENSBMSG00010004479) SIM2 (ENSBMSG00010004467) ENSBMSG00010004455 CLDN14 (ENSBMSG00010004447) ENSBMSG00010004436 CHAF1B (ENSBMSG00010004422) MORC3 (ENSBMSG00010004412) DOP1B (ENSBMSG00010004399) CBR3 (ENSBMSG00010004374) ENSBMSG00010004366 ENSBMSG00010004360 SETD4 (ENSBMSG00010004352) ENSBMSG00010004318 RUNX1 (ENSBMSG00010021734) #22 CLIC6 (ENSBMSG00010021690) #23 RCAN1 (ENSBMSG00010021670) #24 KCNE1 (ENSBMSG00010021664) SMIM34 (ENSBMSG00010021661) #25 C21orf140 (ENSBMSG00010021659) SMIM11 (ENSBMSG00010021652) #26 KCNE2 (ENSBMSG00010021650) ENSBMSG00010021646 SLC5A3 (ENSBMSG00010021637) ENSBMSG00010021628 ITSN1 (ENSBMSG00010021595) CRYZL1 (ENSBMSG00010021538) DONSON (ENSBMSG00010021527) SON (ENSBMSG00010021490) GART (ENSBMSG00010021468) Odontoceti ANCESTRAL SPECIES 9 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.l ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00940000157408 ENSGT00950000183064.b.c ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.l ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00940000157408 ENSGT00950000183064.b.c ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.l ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Monodontidae ANCESTRAL SPECIES 11 ENSGT00940000157408 ENSGT00950000183064.b.c ENSGT00940000154465.C ENSGT00390000013771.c ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.l ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Narwhal MODERN SPECIES 297 DYRK1A (ENSMMNG00015004461) ENSMMNG00015004538 TTC3 (ENSMMNG00015004584) ENSMMNG00015004651 RIPPLY3 (ENSMMNG00015004658) HLCS (ENSMMNG00015004663) SIM2 (ENSMMNG00015004676) CLDN14 (ENSMMNG00015004682) ENSMMNG00015004686 CHAF1B (ENSMMNG00015004691) MORC3 (ENSMMNG00015004698) DOP1B (ENSMMNG00015000157) CBR3 (ENSMMNG00015000244) CBR1 (ENSMMNG00015000275) SETD4 (ENSMMNG00015000294) RUNX1 (ENSMMNG00015000356) #22 CLIC6 (ENSMMNG00015000411) #23 RCAN1 (ENSMMNG00015000457) #24 ENSMMNG00015000491 KCNE1 (ENSMMNG00015000507) SMIM34 (ENSMMNG00015000520) #25 C21orf140 (ENSMMNG00015000526) SMIM11 (ENSMMNG00015000537) #26 KCNE2 (ENSMMNG00015000553) ENSMMNG00015000564 ATP5PO (ENSMMNG00015000577) ITSN1 (ENSMMNG00015000700) CRYZL1 (ENSMMNG00015000823) DONSON (ENSMMNG00015000881) SON (ENSMMNG00015001007) GART (ENSMMNG00015001134) Beluga whale MODERN SPECIES 111 KCNJ6 (ENSDLEG00000020019) DYRK1A (ENSDLEG00000020030) ENSDLEG00000020039 TTC3 (ENSDLEG00000020057) ENSDLEG00000020104 RIPPLY3 (ENSDLEG00000020108) HLCS (ENSDLEG00000020112) SIM2 (ENSDLEG00000020114) CLDN14 (ENSDLEG00000020123) ENSDLEG00000020128 CHAF1B (ENSDLEG00000020132) MORC3 (ENSDLEG00000020136) DOPEY2 (ENSDLEG00000020149) CBR3 (ENSDLEG00000020183) SETD4 (ENSDLEG00000020189) RUNX1 (ENSDLEG00000020193) #22 CLIC6 (ENSDLEG00000020204) #23 RCAN1 (ENSDLEG00000020216) #24 ENSDLEG00000020221 ENSDLEG00000020226 SMIM34 (ENSDLEG00000020228) #25 SMIM11 (ENSDLEG00000020229) #26 KCNE2 (ENSDLEG00000020231) MRPS6 (ENSDLEG00000020234) SLC5A3 (ENSDLEG00000020235) ATP5O (ENSDLEG00000020238) ITSN1 (ENSDLEG00000020277) CRYZL1 (ENSDLEG00000020701) DONSON (ENSDLEG00000020717) SON (ENSDLEG00000020723) GART (ENSDLEG00000020738) Vaquita MODERN SPECIES 15 DYRK1A (ENSPSNG00000003052) VPS26C (ENSPSNG00000002949) TTC3 (ENSPSNG00000002862) PIGP (ENSPSNG00000002811) ENSPSNG00000002780 HLCS (ENSPSNG00000002751) SIM2 (ENSPSNG00000002674) CLDN14 (ENSPSNG00000002661) ENSPSNG00000002647 CHAF1B (ENSPSNG00000002625) MORC3 (ENSPSNG00000002601) DOP1B (ENSPSNG00000002549) CBR3 (ENSPSNG00000002524) CBR1 (ENSPSNG00000002505) SETD4 (ENSPSNG00000002486) RUNX1 (ENSPSNG00000002463) #22 CLIC6 (ENSPSNG00000002429) #23 RCAN1 (ENSPSNG00000002396) #24 ENSPSNG00000002358 KCNE1 (ENSPSNG00000002343) SMIM34 (ENSPSNG00000002331) #25 C21orf140 (ENSPSNG00000002320) KCNE2 (ENSPSNG00000002300) SLC5A3 (ENSPSNG00000002287) ENSPSNG00000002262 ATP5PO (ENSPSNG00000002241) ITSN1 (ENSPSNG00000002133) CRYZL1 (ENSPSNG00000001996) DONSON (ENSPSNG00000001955) SON (ENSPSNG00000001885) GART (ENSPSNG00000001735) Dolphin MODERN SPECIES 1300 RUNX1 (ENSTTRG00000014160) #22 Sperm whale MODERN SPECIES 19 ENSPCTG00005005156 ENSPCTG00005005076 RIPPLY3 (ENSPCTG00005005047) HLCS (ENSPCTG00005005026) SIM2 (ENSPCTG00005005005) ENSPCTG00005004986 CHAF1B (ENSPCTG00005004962) MORC3 (ENSPCTG00005004169) ENSPCTG00005004154 ENSPCTG00005004141 ENSPCTG00005004129 ENSPCTG00005004122 DOP1B (ENSPCTG00005004088) CBR1 (ENSPCTG00005004058) SETD4 (ENSPCTG00005004035) RUNX1 (ENSPCTG00005003945) #22 CLIC6 (ENSPCTG00005003871) #23 RCAN1 (ENSPCTG00005003836) #24 ENSPCTG00005003827 ENSPCTG00005003820 SMIM34 (ENSPCTG00005003814) #25 C21orf140 (ENSPCTG00005003810) SMIM11A (ENSPCTG00005003799) #26 KCNE2 (ENSPCTG00005003790) MRPS6 (ENSPCTG00005003783) ATP5PO (ENSPCTG00005003770) ITSN1 (ENSPCTG00005003725) CRYZL1 (ENSPCTG00005003651) DONSON (ENSPCTG00005003554) ENSPCTG00005003525 ENSPCTG00005003504 Pecora ANCESTRAL SPECIES 8 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.f.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c.a.b ENSGT00510000046499.`c.a.c.a.a ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602.c.b #23 ENSGT00960000186612.A.p.b ENSGT00390000017888 ENSGT00390000004915.b ENSGT00960000186612.A.p.a ENSGT00940000160683 ENSGT00940000161997.a ENSGT00950000182997.a.b.b.a ENSGT00730000110871.a.a.a.b ENSGT00960000191699 ENSGT00390000011514 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b Yarkand deer MODERN SPECIES 10 TTC3 (ENSCHYG00000024217) ENSCHYG00000024148 ENSCHYG00000024121 HLCS (ENSCHYG00000024055) SIM2 (ENSCHYG00000023901) ENSCHYG00000023833 CLDN14 (ENSCHYG00000023819) CHAF1B (ENSCHYG00000023756) MORC3 (ENSCHYG00000023622) DOP1B (ENSCHYG00000023458) ENSCHYG00000023406 ENSCHYG00000023378 ENSCHYG00000023358 ENSCHYG00000023267 SETD4 (ENSCHYG00000023190) RUNX1 (ENSCHYG00000023067) #22 ENSCHYG00000023032 #23 ENSCHYG00000023002 TDRP (ENSCHYG00000022964) FBXO25 (ENSCHYG00000022825) ENSCHYG00000022791 PRMT2 (ENSCHYG00000022622) S100B (ENSCHYG00000022569) DIP2A (ENSCHYG00000021088) PCNT (ENSCHYG00000019684) YBEY (ENSCHYG00000019060) MCM3AP (ENSCHYG00000018660) LSS (ENSCHYG00000018157) SPATC1L (ENSCHYG00000018089) FTCD (ENSCHYG00000017995) COL6A2 (ENSCHYG00000016288) Percora_a ANCESTRAL SPECIES 7 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.f.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c.a.b ENSGT00510000046499.`c.a.c.a.a ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602.c.a #23 ENSGT00960000186612.A.p.b ENSGT00390000017888 ENSGT00390000004915.b ENSGT00940000154486.b.a.a.b ENSGT00940000160683 ENSGT00940000161997.a ENSGT00950000182997.a.b.b.a ENSGT00730000110871.a.a.a.b ENSGT00960000191699 ENSGT00390000011514 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b Siberian musk deer MODERN SPECIES 1185 DYRK1A (ENSMMSG00000015109) VPS26C (ENSMMSG00000014833) TTC3 (ENSMMSG00000014485) ENSMMSG00000014440 RIPPLY3 (ENSMMSG00000014421) HLCS (ENSMMSG00000014404) SIM2 (ENSMMSG00000014390) CLDN14 (ENSMMSG00000014361) CHAF1B (ENSMMSG00000014326) MORC3 (ENSMMSG00000014310) DOP1B (ENSMMSG00000014259) CBR3 (ENSMMSG00000014250) ENSMMSG00000014188 ENSMMSG00000014178 SETD4 (ENSMMSG00000014122) RUNX1 (ENSMMSG00000014047) #22 ENSMMSG00000014024 TDRP (ENSMMSG00000014000) FBXO25 (ENSMMSG00000013966) ENSMMSG00000013903 PRMT2 (ENSMMSG00000013848) S100B (ENSMMSG00000013818) DIP2A (ENSMMSG00000013513) PCNT (ENSMMSG00000013234) YBEY (ENSMMSG00000013126) MCM3AP (ENSMMSG00000013071) LSS (ENSMMSG00000013009) SPATC1L (ENSMMSG00000012984) FTCD (ENSMMSG00000012880) COL6A2 (ENSMMSG00000013324) ENSMMSG00000013286 Bovidae ANCESTRAL SPECIES 9 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.f.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c.a.b ENSGT00510000046499.`c.a.c.a.a ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602.d #23 ENSGT00940000159602.c.a #23 ENSGT00960000186612.A.p.a ENSGT00390000017888 ENSGT00390000004915.b ENSGT00940000154486.b.a.a.b ENSGT00940000160683 ENSGT00940000161997.a ENSGT00950000182997.a.b.b.a ENSGT00730000110871.a.a.a.b ENSGT00960000191699 ENSGT00390000011514 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 Caprinae ANCESTRAL SPECIES 8 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.f.a.b ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c.a.b ENSGT00510000046499.`c.a.c.a.a ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602.c.a.a #23 ENSGT00960000186612.A.p.a ENSGT00390000017888 ENSGT00390000004915.b ENSGT00940000160683 ENSGT00940000161997.a ENSGT00950000182997.a.b.b.a ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b ENSGT00390000005581.a ENSGT00940000155682 ENSGT00940000163601 ENSGT00940000162185 Rambouillet Sheep MODERN SPECIES VPS26C (ENSOARG00020016913) TTC3 (ENSOARG00020015865) PIGP (ENSOARG00020015790) ENSOARG00020015751 ENSOARG00020015653 SIM2 (ENSOARG00020015398) CLDN14 (ENSOARG00020015366) CHAF1B (ENSOARG00020015283) MORC3 (ENSOARG00020015210) DOP1B (ENSOARG00020014787) CBR3 (ENSOARG00020014737) ENSOARG00020014679 ENSOARG00020014594 ENSOARG00020014533 SETD4 (ENSOARG00020014436) RUNX1 (ENSOARG00020014172) #22 ENSOARG00020014033 #23 ENSOARG00020013981 ENSOARG00020013947 ENSOARG00020013896 FBXO25 (ENSOARG00020013642) ENSOARG00020013592 PRMT2 (ENSOARG00020013448) S100B (ENSOARG00020013409) DIP2A (ENSOARG00020009881) ATP5MD (ENSOARG00020009793) YBEY (ENSOARG00020009539) MCM3AP (ENSOARG00020009410) LSS (ENSOARG00020008949) SPATC1L (ENSOARG00020008907) FTCD (ENSOARG00020008875) Goat MODERN SPECIES TTC3 (ENSCHIG00000017294) PIGP (ENSCHIG00000002508) ENSCHIG00000004217 HLCS (ENSCHIG00000019377) SIM2 (ENSCHIG00000024392) CLDN14 (ENSCHIG00000010835) CHAF1B (ENSCHIG00000016231) MORC3 (ENSCHIG00000023242) DOP1B (ENSCHIG00000014635) CBR3 (ENSCHIG00000021573) ENSCHIG00000007290 ENSCHIG00000019223 ENSCHIG00000011667 ENSCHIG00000004827 SETD4 (ENSCHIG00000022771) RUNX1 (ENSCHIG00000016792) #22 ENSCHIG00000020662 #23 ENSCHIG00000010039 TDRP (ENSCHIG00000018317) FBXO25 (ENSCHIG00000023287) PRMT2 (ENSCHIG00000011147) S100B (ENSCHIG00000021487) DIP2A (ENSCHIG00000007147) ENSCHIG00000003698 YBEY (ENSCHIG00000008074) MCM3AP (ENSCHIG00000025098) LSS (ENSCHIG00000013212) SPATC1L (ENSCHIG00000023038) FTCD (ENSCHIG00000010407) COL6A2 (ENSCHIG00000018004) ENSCHIG00000004889 Bovinae ANCESTRAL SPECIES 6 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.f.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c.a.b ENSGT00510000046499.`c.a.c.a.a ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602.d #23 ENSGT00940000159602.c.a #23 ENSGT00960000186612.A.p.a.a ENSGT00390000017888 ENSGT00390000004915.b ENSGT00940000154486.b.a.a.b ENSGT00940000160683 ENSGT00940000161997.a ENSGT00950000182997.a.b.b.a ENSGT00730000110871.a.a.a.b ENSGT00960000191699 ENSGT00390000011514 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 American bison MODERN SPECIES 2975 ENSBBBG00000004246 ENSBBBG00000017149 ENSBBBG00000004234 ENSBBBG00000004231 RIPPLY3 (ENSBBBG00000017085) HLCS (ENSBBBG00000004221) SIM2 (ENSBBBG00000017045) CLDN14 (ENSBBBG00000017017) CHAF1B (ENSBBBG00000016994) MORC3 (ENSBBBG00000016952) DOP1B (ENSBBBG00000016914) ENSBBBG00000006958 ENSBBBG00000016692 ENSBBBG00000007614 SETD4 (ENSBBBG00000016605) RUNX1 (ENSBBBG00000016523) #22 ENSBBBG00000016432 #23 ENSBBBG00000016420 TDRP (ENSBBBG00000016413) FBXO25 (ENSBBBG00000016404) ENSBBBG00000016361 PRMT2 (ENSBBBG00000016343) S100B (ENSBBBG00000016247) DIP2A (ENSBBBG00000016225) ENSBBBG00000003968 YBEY (ENSBBBG00000015798) MCM3AP (ENSBBBG00000015748) LSS (ENSBBBG00000002644) SPATC1L (ENSBBBG00000015631) FTCD (ENSBBBG00000015621) COL6A2 (ENSBBBG00000015610) Bos ANCESTRAL SPECIES 7 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.f.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c.a.b ENSGT00510000046499.`c.a.c.a.a ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602.d #23 ENSGT00940000159602.c.a #23 ENSGT00960000186612.A.p.a.a ENSGT00390000017888 ENSGT00390000004915.b.f ENSGT00940000154486.b.a.a.b ENSGT00940000160683 ENSGT00940000161997.a ENSGT00950000182997.a.b.b.a ENSGT00730000110871.a.a.a.b ENSGT00960000191699 ENSGT00390000011514 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 Bos_b ANCESTRAL SPECIES 5 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.f.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00940000162541 ENSGT00510000046499.`c.a.c.a.b ENSGT00510000046499.`c.a.c.a.a ENSGT00510000046499.`c.a.d.c ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602.c.a #23 ENSGT00960000186612.A.p.a.a ENSGT00960000186612.A.p.a.b ENSGT00390000017888 ENSGT00390000004915.b.f ENSGT00940000154486.b.a.a.b ENSGT00940000160683 ENSGT00940000161997.a ENSGT00950000182997.a.b.b.a ENSGT00730000110871.a.a.a.b ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b ENSGT00390000005581.a Hybrid Bos Indicus MODERN SPECIES VPS26C (ENSBIXG00005016599) ENSBIXG00005016748 ENSBIXG00005016827 RIPPLY3 (ENSBIXG00005016856) HLCS (ENSBIXG00005007330) SIM2 (ENSBIXG00005006755) CLDN14 (ENSBIXG00005017009) CHAF1B (ENSBIXG00005017024) MORC3 (ENSBIXG00005017041) ENSBIXG00005017062 ENSBIXG00005017086 ENSBIXG00005017110 ENSBIXG00005017141 ENSBIXG00005017175 SETD4 (ENSBIXG00005017211) RUNX1 (ENSBIXG00005005427) #22 ENSBIXG00005017394 #23 ENSBIXG00005017402 #23 ENSBIXG00005017410 ENSBIXG00005017443 FBXO25 (ENSBIXG00005017564) ENSBIXG00005002856 PRMT2 (ENSBIXG00005017685) S100B (ENSBIXG00005017738) DIP2A (ENSBIXG00005002893) ENSBIXG00005018060 YBEY (ENSBIXG00005018157) MCM3AP (ENSBIXG00005018185) LSS (ENSBIXG00005018442) SPATC1L (ENSBIXG00005018481) FTCD (ENSBIXG00005018494) Cow MODERN SPECIES TTC3 (ENSBTAG00000008167) PIGP (ENSBTAG00000055107) RIPPLY3 (ENSBTAG00000051916) HLCS (ENSBTAG00000033679) SIM2 (ENSBTAG00000021447) CLDN14 (ENSBTAG00000030585) CHAF1B (ENSBTAG00000011880) MORC3 (ENSBTAG00000011876) DOP1B (ENSBTAG00000014306) ENSBTAG00000053201 CBR3 (ENSBTAG00000018688) MGC127133 (ENSBTAG00000030629) ENSBTAG00000052342 CBR1 (ENSBTAG00000023384) SETD4 (ENSBTAG00000018682) RUNX1 (ENSBTAG00000004742) #22 ENSBTAG00000046447 #23 ENSBTAG00000053000 ENSBTAG00000052599 TDRP (ENSBTAG00000043957) FBXO25 (ENSBTAG00000007039) ENSBTAG00000052513 PRMT2 (ENSBTAG00000005503) S100B (ENSBTAG00000004777) DIP2A (ENSBTAG00000011495) PCNT (ENSBTAG00000030670) C1H21orf58 (ENSBTAG00000021984) YBEY (ENSBTAG00000003161) MCM3AP (ENSBTAG00000003148) LSS (ENSBTAG00000018936) SPATC1L (ENSBTAG00000020409) Bos_a ANCESTRAL SPECIES 5 ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.f.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00940000162541 ENSGT00510000046499.`c.a.c.a.b ENSGT00390000016421.b.a ENSGT00510000046499.`c.a.d ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602.d #23 ENSGT00960000186612.A.p.a.a ENSGT00390000017888 ENSGT00390000004915.b.e ENSGT00940000154486.b.a.a.b ENSGT00940000160683 ENSGT00940000161997.a ENSGT00950000182997.a.b.b.a ENSGT00730000110871.a.a.a.b ENSGT00960000191699 ENSGT00390000011514 ENSGT00950000183170.b.b ENSGT00940000156322 ENSGT00390000011570 ENSGT00520000055666.b Wild yak MODERN SPECIES 1820 DOP1B (ENSBMUG00000010919) CBR3 (ENSBMUG00000011061) CBR1 (ENSBMUG00000011084) SETD4 (ENSBMUG00000011126) RUNX1 (ENSBMUG00000011222) #22 ENSBMUG00000011261 #23 Domestic yak MODERN SPECIES ENSBGRG00000003250 ENSBGRG00000003246 ENSBGRG00000003228 ENSBGRG00000003202 RIPPLY3 (ENSBGRG00000003171) HLCS (ENSBGRG00000003161) SIM2 (ENSBGRG00000003120) CLDN14 (ENSBGRG00000003111) CHAF1B (ENSBGRG00000003046) MORC3 (ENSBGRG00000002919) DOP1B (ENSBGRG00000002831) CBR1 (ENSBGRG00000002778) SETD4 (ENSBGRG00000002744) ENSBGRG00000002732 ENSBGRG00000002722 RUNX1 (ENSBGRG00000002635) #22 ENSBGRG00000002610 #23 ENSBGRG00000002585 FBXO25 (ENSBGRG00000002483) ENSBGRG00000002455 PRMT2 (ENSBGRG00000002397) S100B (ENSBGRG00000002365) DIP2A (ENSBGRG00000001765) ENSBGRG00000001685 ENSBGRG00000001632 ENSBGRG00000001586 MCM3AP (ENSBGRG00000001560) LSS (ENSBGRG00000001100) SPATC1L (ENSBGRG00000001038) FTCD (ENSBGRG00000000949) COL6A2 (ENSBGRG00000000863) Atlantogenata ANCESTRAL SPECIES 53 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Xenarthra ANCESTRAL SPECIES 243 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00490000044099 #25 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Sloth MODERN SPECIES 4699 ENSCHOG00000008686 #22 Armadillo MODERN SPECIES 3255 ENSDNOG00000040094 HLCS (ENSDNOG00000003681) SIM2 (ENSDNOG00000003669) CLDN14 (ENSDNOG00000005131) CHAF1B (ENSDNOG00000012819) MORC3 (ENSDNOG00000003655) DOP1B (ENSDNOG00000017725) CBR3 (ENSDNOG00000004599) ENSDNOG00000046573 ENSDNOG00000032922 SETD4 (ENSDNOG00000031640) ENSDNOG00000047449 ENSDNOG00000041586 ENSDNOG00000018579 RUNX1 (ENSDNOG00000015041) #22 CLIC6 (ENSDNOG00000042065) #23 RCAN1 (ENSDNOG00000012603) #24 KCNE1 (ENSDNOG00000001510) SMIM34 (ENSDNOG00000041999) #25 C21orf140 (ENSDNOG00000039129) SMIM11 (ENSDNOG00000048226) #26 KCNE2 (ENSDNOG00000015806) MRPS6 (ENSDNOG00000041980) ATP5PO (ENSDNOG00000017336) ITSN1 (ENSDNOG00000017327) CRYZL1 (ENSDNOG00000044910) DONSON (ENSDNOG00000018454) SON (ENSDNOG00000036246) GART (ENSDNOG00000018439) Afrotheria ANCESTRAL SPECIES 57 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Tenrec MODERN SPECIES 5063 RUNX1 (ENSETEG00000011313) #22 Afrotheria_a ANCESTRAL SPECIES 54 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Elephant MODERN SPECIES 71 LAMB3 (ENSLAFG00000005222) HSD11B1 (ENSLAFG00000002051) TRAF3IP3 (ENSLAFG00000001370) IRF6 (ENSLAFG00000001374) UTP25 (ENSLAFG00000001377) SYT14 (ENSLAFG00000005288) SERTAD4 (ENSLAFG00000008318) HHAT (ENSLAFG00000021880) KCNH1 (ENSLAFG00000010431) RCOR3 (ENSLAFG00000011042) TRAF5 (ENSLAFG00000003342) ENSLAFG00000029334 ENSLAFG00000031495 SETD4 (ENSLAFG00000012148) ENSLAFG00000028648 RUNX1 (ENSLAFG00000004290) #22 ENSLAFG00000001577 #23 RCAN1 (ENSLAFG00000002437) #24 KCNE1 (ENSLAFG00000002435) C21orf140 (ENSLAFG00000027267) SMIM11 (ENSLAFG00000032757) #26 KCNE2 (ENSLAFG00000013950) MRPS6 (ENSLAFG00000020645) SLC5A3 (ENSLAFG00000017379) ATP5PO (ENSLAFG00000013052) ITSN1 (ENSLAFG00000001327) CRYZL1 (ENSLAFG00000016323) DONSON (ENSLAFG00000016319) SON (ENSLAFG00000016307) GART (ENSLAFG00000016301) DNAJC28 (ENSLAFG00000016297) Hyrax MODERN SPECIES 4324 RUNX1 (ENSPCAG00000016747) #22 Marsupialia ANCESTRAL SPECIES 23 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a.a ENSGT00390000003873 ENSGT00530000063946.a ENSGT00940000155551 ENSGT00940000156294 ENSGT00940000153577.A ENSGT00510000046499 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT01100000263796 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00390000002429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00390000003873 ENSGT00530000063946.a ENSGT00940000155551.c ENSGT00940000156294 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT01100000263796 ENSGT00940000154497.B ENSGT00940000161679 ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C Diprotodontia ANCESTRAL SPECIES 47 ENSGT00390000002429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00390000003873 ENSGT00530000063946.a ENSGT00940000155551.c ENSGT00940000156294 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT01100000263796 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Diprotodontia_a ANCESTRAL SPECIES 44 ENSGT00390000002429 ENSGT00390000013771 ENSGT00940000154465.C ENSGT00950000183064.b ENSGT00940000157408 ENSGT01080000257365.b.a.b.a.a ENSGT00990000203615.b.a.a.a.b ENSGT00940000160662 ENSGT00940000160202 ENSGT00390000003873 ENSGT00530000063946.a ENSGT00940000155551.c ENSGT00940000156294 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT01100000263796 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060.a ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.C ENSGT00940000154065.b Common wonbat MODERN SPECIES 1045 VPS26C (ENSVURG00010005140) DYRK1A (ENSVURG00010005101) KCNJ6 (ENSVURG00010005090) KCNJ15 (ENSVURG00010005075) ENSVURG00010005062 ERG (ENSVURG00010005031) ETS2 (ENSVURG00010004972) TRAPPC10 (ENSVURG00010004938) SCAF4 (ENSVURG00010004913) ENSVURG00010004902 TIAM1 (ENSVURG00010004803) ENSVURG00010004777 SETD4 (ENSVURG00010004756) ENSVURG00010004748 ENSVURG00010004739 RUNX1 (ENSVURG00010004671) #22 ENSVURG00010004605 #23 RCAN1 (ENSVURG00010004550) #24 ENSVURG00010004544 C21orf140 (ENSVURG00010004540) ENSVURG00010004532 ENSVURG00010004526 ENSVURG00010004505 ENSVURG00010004495 ENSVURG00010004486 ENSVURG00010004475 ITSN1 (ENSVURG00010004436) CRYZL1 (ENSVURG00010004375) DONSON (ENSVURG00010003807) ENSVURG00010003761 GART (ENSVURG00010003739) koala MODERN SPECIES 61 KCNJ6 (ENSPCIG00000009713) KCNJ15 (ENSPCIG00000022948) ERG (ENSPCIG00000022944) ETS2 (ENSPCIG00000024682) TRAPPC10 (ENSPCIG00000011933) SCAF4 (ENSPCIG00000028183) SOD1 (ENSPCIG00000028182) TIAM1 (ENSPCIG00000012837) ENSPCIG00000035108 ENSPCIG00000033544 SETD4 (ENSPCIG00000012833) ENSPCIG00000012832 ENSPCIG00000012831 ENSPCIG00000012826 ENSPCIG00000031436 RUNX1 (ENSPCIG00000008933) #22 ENSPCIG00000008934 #23 RCAN1 (ENSPCIG00000008935) #24 KCNE1 (ENSPCIG00000008936) C21orf140 (ENSPCIG00000008940) ENSPCIG00000008941 KCNE2 (ENSPCIG00000008942) MRPS6 (ENSPCIG00000008946) ENSPCIG00000008949 ENSPCIG00000036340 ITSN1 (ENSPCIG00000009056) CRYZL1 (ENSPCIG00000023562) ENSPCIG00000033095 DONSON (ENSPCIG00000012882) ENSPCIG00000012884 GART (ENSPCIG00000012886) Wallaby MODERN SPECIES 6398 RUNX1 (ENSMEUG00000007832) #22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000013708 VPS26C (ENSSHAG00000013325) DYRK1A (ENSSHAG00000026536) KCNJ6 (ENSSHAG00000026648) ENSSHAG00000022321 KCNJ15 (ENSSHAG00000022244) ERG (ENSSHAG00000008486) ENSSHAG00000007055 ENSSHAG00000003843 ENSSHAG00000001581 ENSSHAG00000020925 ENSSHAG00000007634 ENSSHAG00000008714 SETD4 (ENSSHAG00000008853) ENSSHAG00000027118 RUNX1 (ENSSHAG00000014782) #22 ENSSHAG00000022481 #23 RCAN1 (ENSSHAG00000016384) #24 KCNE1 (ENSSHAG00000031363) C21orf140 (ENSSHAG00000016240) ENSSHAG00000016273 KCNE2 (ENSSHAG00000001622) SLC5A3 (ENSSHAG00000031820) ATP5PO (ENSSHAG00000000409) ITSN1 (ENSSHAG00000002428) CRYZL1 (ENSSHAG00000005975) DONSON (ENSSHAG00000008044) SON (ENSSHAG00000008266) GART (ENSSHAG00000008555) DNAJC28 (ENSSHAG00000001509) TMEM50B (ENSSHAG00000020542) Opossum MODERN SPECIES 3 SIK1 (ENSMODG00000021031) HSF2BP (ENSMODG00000021032) RRP1B (ENSMODG00000021033) ENSMODG00000037340 PDXK (ENSMODG00000021034) CSTB (ENSMODG00000021035) ENSMODG00000051346 AGPAT3 (ENSMODG00000021037) TRAPPC10 (ENSMODG00000021039) SCAF4 (ENSMODG00000021040) SOD1 (ENSMODG00000021041) TIAM1 (ENSMODG00000021043) ENSMODG00000050855 ENSMODG00000021047 SETD4 (ENSMODG00000021048) RUNX1 (ENSMODG00000021051) #22 ENSMODG00000021052 #23 ENSMODG00000041490 RCAN1 (ENSMODG00000021053) #24 KCNE1 (ENSMODG00000025354) C21orf140 (ENSMODG00000025353) ENSMODG00000046807 KCNE2 (ENSMODG00000025352) ENSMODG00000027435 MRPS6 (ENSMODG00000021054) ENSMODG00000039435 ENSMODG00000049224 ITSN1 (ENSMODG00000021058) ENSMODG00000040901 CRYZL1 (ENSMODG00000021059) DONSON (ENSMODG00000021060) Platypus MODERN SPECIES 8 ENSOANG00000043153 TMEM125 (ENSOANG00000008210) ENSOANG00000044682 CFAP57 (ENSOANG00000008209) EBNA1BP2 (ENSOANG00000045761) ENSOANG00000001140 PIF1 (ENSOANG00000001139) HLCS (ENSOANG00000000154) SIM2 (ENSOANG00000009770) CLDN14 (ENSOANG00000009769) CHAF1B (ENSOANG00000009768) MORC3 (ENSOANG00000009766) DOP1B (ENSOANG00000009765) CBR1 (ENSOANG00000009764) SETD4 (ENSOANG00000009763) RUNX1 (ENSOANG00000043365) #22 ENSOANG00000002445 #23 RCAN1 (ENSOANG00000048939) #24 KCNE1 (ENSOANG00000002443) C21orf140 (ENSOANG00000002442) SMIM11 (ENSOANG00000022016) #26 KCNE2 (ENSOANG00000002441) ENSOANG00000043858 ATP5PO (ENSOANG00000002438) ITSN1 (ENSOANG00000002436) ENSOANG00000036217 DONSON (ENSOANG00000002434) SON (ENSOANG00000049085) GART (ENSOANG00000002432) ENSOANG00000002431 DNAJC28 (ENSOANG00000002430) Sauria ANCESTRAL SPECIES 2 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Lepidosauria ANCESTRAL SPECIES 4 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Episquamata ANCESTRAL SPECIES 2 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Laterata ANCESTRAL SPECIES ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499.hb ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A ENSGT00390000000292.B Common wall lizard MODERN SPECIES 12 ENSPMRG00000021032 VPS26C (ENSPMRG00000021026) ENSPMRG00000021012 PIGP (ENSPMRG00000020985) ENSPMRG00000020980 HLCS (ENSPMRG00000020975) SIM2 (ENSPMRG00000020967) CLDN14 (ENSPMRG00000020960) CHAF1B (ENSPMRG00000020932) MORC3 (ENSPMRG00000020919) ENSPMRG00000020916 DOP1B (ENSPMRG00000020895) ENSPMRG00000020886 ENSPMRG00000020881 SETD4 (ENSPMRG00000020875) RUNX1 (ENSPMRG00000020866) #22 ENSPMRG00000020860 CLIC6 (ENSPMRG00000020845) #23 RCAN1 (ENSPMRG00000020837) #24 KCNE1 (ENSPMRG00000020832) C21orf140 (ENSPMRG00000020828) SMIM11 (ENSPMRG00000020819) #26 KCNE2 (ENSPMRG00000020816) MRPS6 (ENSPMRG00000020810) SLC5A3 (ENSPMRG00000020806) ATP5PO (ENSPMRG00000020800) ENSPMRG00000020792 ENSPMRG00000020788 ITSN1 (ENSPMRG00000019116) ENSPMRG00000018876 CRYZL1 (ENSPMRG00000018867) Argentine black and white tegu MODERN SPECIES KCNJ15 (ENSSMRG00000022997) ENSSMRG00000022998 KCNJ6 (ENSSMRG00000022999) DYRK1A (ENSSMRG00000023000) VPS26C (ENSSMRG00000023001) TTC3 (ENSSMRG00000023002) PIGP (ENSSMRG00000023003) HLCS (ENSSMRG00000023004) SIM2 (ENSSMRG00000023005) CLDN14 (ENSSMRG00000023006) CHAF1B (ENSSMRG00000023007) MORC3 (ENSSMRG00000023008) SETD4 (ENSSMRG00000023009) DOP1B (ENSSMRG00000023010) CBR1 (ENSSMRG00000023011) RUNX1 (ENSSMRG00000023016) #22 CLIC6 (ENSSMRG00000023018) #23 RCAN1 (ENSSMRG00000023019) #24 KCNE1 (ENSSMRG00000023020) C21orf140 (ENSSMRG00000023021) SMIM11 (ENSSMRG00000023022) #26 KCNE2 (ENSSMRG00000023023) MRPS6 (ENSSMRG00000023024) ATP5PO (ENSSMRG00000023026) ITSN1 (ENSSMRG00000023027) CRYZL1 (ENSSMRG00000023047) DONSON (ENSSMRG00000023048) ENSSMRG00000023049 ENSSMRG00000023050 ENSSMRG00000023051 TMEM50B (ENSSMRG00000023052) Toxicofera ANCESTRAL SPECIES 9 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Elapidae ANCESTRAL SPECIES 10 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408.e ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060.db ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Elapidae_a ANCESTRAL SPECIES 12 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408.e ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00640000091610.g #26 ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610.h #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060.db ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Acanthophiinae ANCESTRAL SPECIES 14 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408.e ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610.h #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060.db ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Mainland tiger snake MODERN SPECIES 7 KCNJ15 (ENSNSUG00000017828) KCNJ6 (ENSNSUG00000017826) DYRK1A (ENSNSUG00000017825) VPS26C (ENSNSUG00000017824) ENSNSUG00000017821 PIGP (ENSNSUG00000017820) HLCS (ENSNSUG00000017807) SIM2 (ENSNSUG00000017806) CLDN14 (ENSNSUG00000017790) CHAF1B (ENSNSUG00000017788) MORC3 (ENSNSUG00000017787) ENSNSUG00000017786 ENSNSUG00000017785 CBR1 (ENSNSUG00000017784) SETD4 (ENSNSUG00000017783) RUNX1 (ENSNSUG00000017781) #22 CLIC6 (ENSNSUG00000017780) #23 RCAN1 (ENSNSUG00000017778) #24 ENSNSUG00000017775 C21orf140 (ENSNSUG00000017774) ENSNSUG00000017773 #26 KCNE2 (ENSNSUG00000017772) MRPS6 (ENSNSUG00000017769) ENSNSUG00000017767 ITSN1 (ENSNSUG00000017545) ENSNSUG00000017544 CRYZL1 (ENSNSUG00000017543) DONSON (ENSNSUG00000017542) ENSNSUG00000017541 ENSNSUG00000017249 ENSNSUG00000017247 Eastern brown snake MODERN SPECIES 14 DYRK1A (ENSPTXG00000012350) ENSPTXG00000012351 VPS26C (ENSPTXG00000012353) ENSPTXG00000012354 ENSPTXG00000000065 PIGP (ENSPTXG00000000100) HLCS (ENSPTXG00000000119) SIM2 (ENSPTXG00000000149) ENSPTXG00000000168 ENSPTXG00000000176 CHAF1B (ENSPTXG00000000200) MORC3 (ENSPTXG00000000231) DOP1B (ENSPTXG00000000252) CBR1 (ENSPTXG00000000339) SETD4 (ENSPTXG00000000349) RUNX1 (ENSPTXG00000000360) #22 CLIC6 (ENSPTXG00000000419) #23 RCAN1 (ENSPTXG00000000428) #24 KCNE1 (ENSPTXG00000000438) ENSPTXG00000000444 #26 ENSPTXG00000000451 C21orf140 (ENSPTXG00000000465) KCNE2 (ENSPTXG00000000474) MRPS6 (ENSPTXG00000000485) ENSPTXG00000000490 ENSPTXG00000000503 ITSN1 (ENSPTXG00000000518) CRYZL1 (ENSPTXG00000000541) DONSON (ENSPTXG00000000552) ENSPTXG00000000569 ENSPTXG00000000589 Blue-lipped sea krait MODERN SPECIES 6107 ENSLLTG00000009287 #22 CLIC6 (ENSLLTG00000009298) #23 Indian cobra MODERN SPECIES 4 VPS26C (ENSNNAG00000015478) ENSNNAG00000015490 PIGP (ENSNNAG00000004114) ENSNNAG00000004128 HLCS (ENSNNAG00000004191) SIM2 (ENSNNAG00000004801) CLDN14 (ENSNNAG00000004849) CHAF1B (ENSNNAG00000004860) MORC3 (ENSNNAG00000004969) ENSNNAG00000004999 ENSNNAG00000005054 CBR1 (ENSNNAG00000005065) SETD4 (ENSNNAG00000005083) ENSNNAG00000005111 ENSNNAG00000005120 RUNX1 (ENSNNAG00000005138) #22 CLIC6 (ENSNNAG00000005150) #23 RCAN1 (ENSNNAG00000005159) #24 KCNE1 (ENSNNAG00000005174) C21orf140 (ENSNNAG00000005181) SMIM11 (ENSNNAG00000005188) #26 KCNE2 (ENSNNAG00000005195) MRPS6 (ENSNNAG00000005208) SLC5A3 (ENSNNAG00000005221) ATP5PO (ENSNNAG00000005249) ITSN1 (ENSNNAG00000005299) CRYZL1 (ENSNNAG00000005501) DONSON (ENSNNAG00000005580) ENSNNAG00000005771 ENSNNAG00000005817 ENSNNAG00000005957 Lizard MODERN SPECIES 2 KCNJ6 (ENSACAG00000009168) DYRK1A (ENSACAG00000009116) ENSACAG00000039859 VPS26C (ENSACAG00000009090) ENSACAG00000035690 ENSACAG00000027720 PIGP (ENSACAG00000008861) HLCS (ENSACAG00000008830) ENSACAG00000034650 ENSACAG00000035582 SIM2 (ENSACAG00000008765) CLDN14 (ENSACAG00000012761) CHAF1B (ENSACAG00000012679) ENSACAG00000012615 DOP1B (ENSACAG00000012567) RUNX1 (ENSACAG00000005164) #22 CLIC6 (ENSACAG00000005113) #23 RCAN1 (ENSACAG00000005089) #24 ENSACAG00000042795 KCNE1 (ENSACAG00000005088) C21orf140 (ENSACAG00000005087) SMIM11 (ENSACAG00000020988) #26 KCNE2 (ENSACAG00000043621) MRPS6 (ENSACAG00000043047) SLC5A3 (ENSACAG00000042146) ENSACAG00000042850 ATP5PO (ENSACAG00000005042) ITSN1 (ENSACAG00000004697) ENSACAG00000004694 DONSON (ENSACAG00000004693) ENSACAG00000004681 tuatara MODERN SPECIES 1068 RUNX1 (ENSSPUG00000019206) #22 CLIC6 (ENSSPUG00000019204) #23 RCAN1 (ENSSPUG00000019203) #24 KCNE1 (ENSSPUG00000019201) SMIM11 (ENSSPUG00000019198) #26 KCNE2 (ENSSPUG00000019197) Archelosauria ANCESTRAL SPECIES ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Cryptodira ANCESTRAL SPECIES ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Testudinoidea ANCESTRAL SPECIES 1 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870.c #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Testudinidae ANCESTRAL SPECIES ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870.c #24 ENSGT00940000154497.A ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT01030000235410 ENSGT01100000263796 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 Goode s thornscrub tortoise MODERN SPECIES KCNJ15 (ENSGEVG00005003045) KCNJ6 (ENSGEVG00005003053) DYRK1A (ENSGEVG00005003065) VPS26C (ENSGEVG00005003088) TTC3 (ENSGEVG00005003139) PIGP (ENSGEVG00005003209) ENSGEVG00005003219 HLCS (ENSGEVG00005003229) SIM2 (ENSGEVG00005003239) CLDN14 (ENSGEVG00005003252) CHAF1B (ENSGEVG00005003264) MORC3 (ENSGEVG00005003292) DOP1B (ENSGEVG00005003352) CBR1 (ENSGEVG00005003410) SETD4 (ENSGEVG00005003420) RUNX1 (ENSGEVG00005003432) #22 CLIC6 (ENSGEVG00005003448) #23 RCAN1 (ENSGEVG00005003467) #24 KCNE1 (ENSGEVG00005003510) ENSGEVG00005003514 C21orf140 (ENSGEVG00005003521) SMIM11 (ENSGEVG00005003527) #26 KCNE2 (ENSGEVG00005003535) MRPS6 (ENSGEVG00005003540) SLC5A3 (ENSGEVG00005003549) ATP5PO (ENSGEVG00005003556) ITSN1 (ENSGEVG00005003569) CRYZL1 (ENSGEVG00005003632) DONSON (ENSGEVG00005003657) ENSGEVG00005003679 ENSGEVG00005003700 Abingdon island giant tortoise MODERN SPECIES 49 ENSCABG00000005062 ENSCABG00000005064 CBR1 (ENSCABG00000005067) SETD4 (ENSCABG00000005069) ENSCABG00000005073 RUNX1 (ENSCABG00000005076) #22 Emydidae ANCESTRAL SPECIES 28 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00990000212550 ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870.c #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00390000015060 ENSGT00940000164632.b ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00950000185967 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 10 ENSTMTG00000016192 ENSTMTG00000016204 ENSTMTG00000016213 ENSTMTG00000016249 ENSTMTG00000016281 ENSTMTG00000016296 ENSTMTG00000016311 ENSTMTG00000016329 ENSTMTG00000016364 ENSTMTG00000016409 ENSTMTG00000016429 ENSTMTG00000016456 ENSTMTG00000016514 ENSTMTG00000016601 ENSTMTG00000016619 ENSTMTG00000016684 #22 ENSTMTG00000016708 #23 ENSTMTG00000016763 #24 ENSTMTG00000016768 ENSTMTG00000016773 ENSTMTG00000016778 #26 ENSTMTG00000016784 ENSTMTG00000016789 ENSTMTG00000016795 ENSTMTG00000016809 ENSTMTG00000016830 ENSTMTG00000016894 ENSTMTG00000016935 ENSTMTG00000017091 ENSTMTG00000017134 ENSTMTG00000017485 Three-toed box turtle MODERN SPECIES 11 ENSTMTG00000022076 ENSTMTG00000022077 ENSTMTG00000022082 ENSTMTG00000022091 ENSTMTG00000022098 ENSTMTG00000022101 ENSTMTG00000022111 ENSTMTG00000022119 ENSTMTG00000022125 ENSTMTG00000022128 ENSTMTG00000022139 ENSTMTG00000022213 ENSTMTG00000022330 ENSTMTG00000022334 ENSTMTG00000022340 ENSTMTG00000022343 #22 ENSTMTG00000022358 #23 ENSTMTG00000022368 #24 ENSTMTG00000022374 ENSTMTG00000022380 ENSTMTG00000022381 #26 ENSTMTG00000022383 ENSTMTG00000022386 ENSTMTG00000022391 ENSTMTG00000022396 ENSTMTG00000022402 ENSTMTG00000022420 ENSTMTG00000011858 ENSTMTG00000011872 ENSTMTG00000011933 ENSTMTG00000012014 painted turtle MODERN SPECIES 2425 INSC (ENSCPBG00000004208) CALCB (ENSCPBG00000004216) CYP2R1 (ENSCPBG00000004222) PDE3B (ENSCPBG00000004237) VPS26C (ENSCPBG00000004308) ENSCPBG00000005128 PIGP (ENSCPBG00000005152) HLCS (ENSCPBG00000005174) SIM2 (ENSCPBG00000005184) CLDN14 (ENSCPBG00000005191) CHAF1B (ENSCPBG00000005207) MORC3 (ENSCPBG00000005223) DOP1B (ENSCPBG00000005236) CBR1 (ENSCPBG00000005257) SETD4 (ENSCPBG00000005262) RUNX1 (ENSCPBG00000005280) #22 CLIC6 (ENSCPBG00000005309) #23 RCAN1 (ENSCPBG00000005316) #24 KCNE1 (ENSCPBG00000005321) ENSCPBG00000005323 C21orf140 (ENSCPBG00000005325) SMIM11 (ENSCPBG00000005328) #26 KCNE2 (ENSCPBG00000005332) SLC5A3 (ENSCPBG00000005335) ATP5PO (ENSCPBG00000005337) ITSN1 (ENSCPBG00000005350) ENSCPBG00000005374 CRYZL1 (ENSCPBG00000005395) DONSON (ENSCPBG00000005406) ENSCPBG00000005420 ENSCPBG00000005424 Chinese turtle MODERN SPECIES 1269 ENSPSIG00000001978 KCNJ6 (ENSPSIG00000010501) DYRK1A (ENSPSIG00000011508) VPS26C (ENSPSIG00000011714) TTC3 (ENSPSIG00000011982) PIGP (ENSPSIG00000013127) HLCS (ENSPSIG00000013364) SIM2 (ENSPSIG00000013972) CLDN14 (ENSPSIG00000001979) CHAF1B (ENSPSIG00000013978) ENSPSIG00000014989 MORC3 (ENSPSIG00000015179) DOP1B (ENSPSIG00000017146) CBR1 (ENSPSIG00000017403) SETD4 (ENSPSIG00000017533) RUNX1 (ENSPSIG00000017547) #22 CLIC6 (ENSPSIG00000017644) #23 ENSPSIG00000001980 RCAN1 (ENSPSIG00000017696) #24 KCNE1 (ENSPSIG00000001982) C21orf140 (ENSPSIG00000001983) SMIM11 (ENSPSIG00000017865) #26 KCNE2 (ENSPSIG00000001984) ENSPSIG00000001985 ENSPSIG00000017871 MRPS6 (ENSPSIG00000017909) SLC5A3 (ENSPSIG00000001986) ATP5PO (ENSPSIG00000017955) ITSN1 (ENSPSIG00000006579) CRYZL1 (ENSPSIG00000006909) DONSON (ENSPSIG00000007638) Archosauria ANCESTRAL SPECIES 2 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00950000185967 Australian saltwater crocodile MODERN SPECIES 27 ERG (ENSCPRG00005015767) KCNJ15 (ENSCPRG00005015763) KCNJ6 (ENSCPRG00005015758) DYRK1A (ENSCPRG00005015754) VPS26C (ENSCPRG00005015739) ENSCPRG00005015735 PIGP (ENSCPRG00005015731) HLCS (ENSCPRG00005015723) SIM2 (ENSCPRG00005015715) CLDN14 (ENSCPRG00005015707) CHAF1B (ENSCPRG00005015702) MORC3 (ENSCPRG00005015696) DOP1B (ENSCPRG00005015322) CBR1 (ENSCPRG00005015294) SETD4 (ENSCPRG00005015289) RUNX1 (ENSCPRG00005015282) #22 RCAN1 (ENSCPRG00005015274) #24 KCNE1 (ENSCPRG00005015268) ENSCPRG00005015263 C21orf140 (ENSCPRG00005015260) SMIM11 (ENSCPRG00005015255) #26 KCNE2 (ENSCPRG00005015249) MRPS6 (ENSCPRG00005015236) SLC5A3 (ENSCPRG00005015234) ATP5PO (ENSCPRG00005015216) ITSN1 (ENSCPRG00005015152) CRYZL1 (ENSCPRG00005015133) DONSON (ENSCPRG00005015125) ENSCPRG00005015118 ENSCPRG00005014831 ENSCPRG00005014597 Aves ANCESTRAL SPECIES ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00950000185967 African ostrich MODERN SPECIES 353 VPS26C (ENSSCUG00000004115) ENSSCUG00000004116 ENSSCUG00000004117 PIGP (ENSSCUG00000004118) HLCS (ENSSCUG00000004120) SIM2 (ENSSCUG00000004121) CLDN14 (ENSSCUG00000004122) CHAF1B (ENSSCUG00000004123) MORC3 (ENSSCUG00000004124) DOP1B (ENSSCUG00000004126) SETD4 (ENSSCUG00000004127) CBR1 (ENSSCUG00000004128) RUNX1 (ENSSCUG00000004133) #22 CLIC6 (ENSSCUG00000004134) #23 RCAN1 (ENSSCUG00000004135) #24 KCNE1 (ENSSCUG00000004136) ENSSCUG00000004137 C21orf140 (ENSSCUG00000004138) SMIM11 (ENSSCUG00000004140) #26 KCNE2 (ENSSCUG00000004141) MRPS6 (ENSSCUG00000004143) SLC5A3 (ENSSCUG00000004147) ATP5PO (ENSSCUG00000004157) ITSN1 (ENSSCUG00000004162) CRYZL1 (ENSSCUG00000004170) DONSON (ENSSCUG00000004176) ENSSCUG00000004182 ENSSCUG00000004187 Neognathae ANCESTRAL SPECIES 1 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00950000185967 Galloanserae ANCESTRAL SPECIES 1 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Anatidae ANCESTRAL SPECIES 6 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00960000192692 ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 Pink-footed goose MODERN SPECIES 92 ERG (ENSABRG00000007601) KCNJ15 (ENSABRG00000007567) ENSABRG00000007532 KCNJ6 (ENSABRG00000007507) DYRK1A (ENSABRG00000007369) VPS26C (ENSABRG00000007303) PIGP (ENSABRG00000007271) HLCS (ENSABRG00000007232) SIM2 (ENSABRG00000007227) CLDN14 (ENSABRG00000007223) CHAF1B (ENSABRG00000007176) MORC3 (ENSABRG00000007044) DOP1B (ENSABRG00000005760) CBR1 (ENSABRG00000005488) SETD4 (ENSABRG00000005444) RUNX1 (ENSABRG00000005392) #22 CLIC6 (ENSABRG00000005383) #23 RCAN1 (ENSABRG00000005363) #24 KCNE1 (ENSABRG00000005346) ENSABRG00000005336 C21orf140 (ENSABRG00000005331) SMIM11 (ENSABRG00000005319) #26 KCNE2 (ENSABRG00000005300) Duck MODERN SPECIES DYRK1A (ENSAPLG00000011621) VPS26C (ENSAPLG00000011951) ENSAPLG00000012209 ENSAPLG00000028063 ENSAPLG00000019136 PIGP (ENSAPLG00000022878) RIPPLY3 (ENSAPLG00000019819) HLCS (ENSAPLG00000013775) SIM2 (ENSAPLG00000014050) CLDN14 (ENSAPLG00000011573) CHAF1B (ENSAPLG00000014150) MORC3 (ENSAPLG00000014621) DOP1B (ENSAPLG00000015059) CBR1 (ENSAPLG00000015892) SETD4 (ENSAPLG00000015936) RUNX1 (ENSAPLG00000007026) #22 CLIC6 (ENSAPLG00000021137) #23 RCAN1 (ENSAPLG00000007074) #24 KCNE1 (ENSAPLG00000001206) ENSAPLG00000022692 C21orf140 (ENSAPLG00000001213) ENSAPLG00000001215 KCNE2 (ENSAPLG00000001217) ENSAPLG00000025146 ATP5PO (ENSAPLG00000007097) ITSN1 (ENSAPLG00000007137) DONSON (ENSAPLG00000008688) ENSAPLG00000008908 ENSAPLG00000024411 ENSAPLG00000008933 ENSAPLG00000010573 Phasianidae ANCESTRAL SPECIES ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065.f ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Phasianidae_b ANCESTRAL SPECIES ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065.f ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A Turkey MODERN SPECIES DNAJC28 (ENSMGAG00000016136) DONSON (ENSMGAG00000014525) ENSMGAG00000014524 ENSMGAG00000014532 ENSMGAG00000016762 ENSMGAG00000022613 ENSMGAG00000014531 ENSMGAG00000020089 ENSMGAG00000016141 KCNE1 (ENSMGAG00000016147) ENSMGAG00000022720 C21orf140 (ENSMGAG00000016158) SMIM11 (ENSMGAG00000016155) #26 KCNE2 (ENSMGAG00000016161) ENSMGAG00000014533 #24 ENSMGAG00000014534 #22 ENSMGAG00000014535 #23 CBR1 (ENSMGAG00000014541) SETD4 (ENSMGAG00000014542) DOP1B (ENSMGAG00000014540) CHAF1B (ENSMGAG00000014544) CLDN14 (ENSMGAG00000014543) SIM2 (ENSMGAG00000014545) HLCS (ENSMGAG00000014546) RIPPLY3 (ENSMGAG00000019709) PIGP (ENSMGAG00000022533) ENSMGAG00000018948 ENSMGAG00000014549 VPS26C (ENSMGAG00000014550) DYRK1A (ENSMGAG00000014551) KCNJ6 (ENSMGAG00000014552) Chicken MODERN SPECIES KCNJ15 (ENSGALG00010013304) KCNJ6 (ENSGALG00010013205) DYRK1A (ENSGALG00010013181) DSCR3 (ENSGALG00010013168) TTC3 (ENSGALG00010013135) PIGP (ENSGALG00010013114) RIPPLY3 (ENSGALG00010013109) HLCS (ENSGALG00010013104) SIM2 (ENSGALG00010013099) CLDN14 (ENSGALG00010013096) CHAF1B (ENSGALG00010013082) MORC4 (ENSGALG00010013037) DOP1B (ENSGALG00010012993) CBR3 (ENSGALG00010012964) SETD4 (ENSGALG00010012925) RUNX1 (ENSGALG00010012917) #22 CLIC6 (ENSGALG00010012894) #23 RCAN1 (ENSGALG00010012879) #24 KCNE1 (ENSGALG00010012863) ENSGALG00010012853 C21orf140 (ENSGALG00010013862) KCNE2 (ENSGALG00010012775) SLC5A3 (ENSGALG00010012682) MRPS6 (ENSGALG00010012648) ATP5PO (ENSGALG00010012606) ITSN1 (ENSGALG00010012195) CRYZL1 (ENSGALG00010012129) DONSON (ENSGALG00010012105) SON (ENSGALG00010012102) GART (ENSGALG00010012097) ENSGALG00010012094 Japanese quail MODERN SPECIES KCNJ15 (ENSCJPG00005007938) KCNJ6 (ENSCJPG00005007874) ENSCJPG00005007872 DYRK1A (ENSCJPG00005007871) VPS26C (ENSCJPG00005007843) TTC3 (ENSCJPG00005007838) PIGP (ENSCJPG00005007837) HLCS (ENSCJPG00005007836) SIM2 (ENSCJPG00005007820) CLDN14 (ENSCJPG00005007818) CHAF1B (ENSCJPG00005007599) MORC3 (ENSCJPG00005007588) DOP1B (ENSCJPG00005007582) CBR1 (ENSCJPG00005007568) SETD4 (ENSCJPG00005007565) RUNX1 (ENSCJPG00005007547) #22 CLIC6 (ENSCJPG00005007501) #23 RCAN1 (ENSCJPG00005007500) #24 KCNE1 (ENSCJPG00005007499) ENSCJPG00005007498 C21orf140 (ENSCJPG00005007497) SMIM11 (ENSCJPG00005007496) #26 KCNE2 (ENSCJPG00005007495) MRPS6 (ENSCJPG00005007475) SLC5A3 (ENSCJPG00005007474) ATP5PO (ENSCJPG00005007472) ITSN1 (ENSCJPG00005006249) CRYZL1 (ENSCJPG00005006215) DONSON (ENSCJPG00005006211) ENSCJPG00005006204 ENSCJPG00005006200 Neognathae_b ANCESTRAL SPECIES ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00950000185967 Neognathae_c ANCESTRAL SPECIES 4 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00390000010669 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00940000157065 ENSGT00390000013113 ENSGT00390000000447 ENSGT00730000111141 ENSGT00390000000292.A ENSGT00390000000292.B Golden eagle MODERN SPECIES 23 KCNJ15 (ENSACCG00020006619) KCNJ6 (ENSACCG00020006608) DYRK1A (ENSACCG00020006581) VPS26C (ENSACCG00020006549) TTC3 (ENSACCG00020006500) PIGP (ENSACCG00020006482) HLCS (ENSACCG00020006470) SIM2 (ENSACCG00020006453) CLDN14 (ENSACCG00020006442) CHAF1B (ENSACCG00020006425) MORC3 (ENSACCG00020006368) DOP1B (ENSACCG00020006295) ENSACCG00020006276 CBR1 (ENSACCG00020006262) SETD4 (ENSACCG00020006251) RUNX1 (ENSACCG00020006243) #22 CLIC6 (ENSACCG00020006228) #23 RCAN1 (ENSACCG00020006211) #24 KCNE1 (ENSACCG00020006195) ENSACCG00020006188 KCNE2 (ENSACCG00020006169) MRPS6 (ENSACCG00020006156) ATP5PO (ENSACCG00020006133) ITSN1 (ENSACCG00020006017) CRYZL1 (ENSACCG00020005870) DONSON (ENSACCG00020005827) ENSACCG00020005798 ENSACCG00020005775 ENSACCG00020005739 DNAJC28 (ENSACCG00020005718) TMEM50B (ENSACCG00020005662) Kakapo MODERN SPECIES 11 VPS26C (ENSSHBG00005017954) ENSSHBG00005017947 ENSSHBG00005017941 ENSSHBG00005017936 ENSSHBG00005017924 PIGP (ENSSHBG00005017917) HLCS (ENSSHBG00005017906) SIM2 (ENSSHBG00005017903) CLDN14 (ENSSHBG00005017898) CHAF1B (ENSSHBG00005017896) MORC3 (ENSSHBG00005017750) DOP1B (ENSSHBG00005017708) CBR1 (ENSSHBG00005017687) SETD4 (ENSSHBG00005017681) ENSSHBG00005017672 RUNX1 (ENSSHBG00005017663) #22 CLIC6 (ENSSHBG00005017656) #23 RCAN1 (ENSSHBG00005017652) #24 KCNE1 (ENSSHBG00005017649) ENSSHBG00005017646 C21orf140 (ENSSHBG00005017643) KCNE2 (ENSSHBG00005017628) MRPS6 (ENSSHBG00005017630) SLC5A3 (ENSSHBG00005017633) ATP5PO (ENSSHBG00005017624) ITSN1 (ENSSHBG00005007416) CRYZL1 (ENSSHBG00005006544) DONSON (ENSSHBG00005006514) ENSSHBG00005006478 ENSSHBG00005006413 ENSSHBG00005006334 Passeriformes DUPLICATION Passeriformes ANCESTRAL SPECIES 1 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255.t #22 ENSGT00940000159255.s #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00390000000292.B ENSGT00390000000292.A ENSGT00950000185967 ENSGT00730000111141 ENSGT00390000000447 ENSGT00390000013113 Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255.t #22 ENSGT00940000159255.s #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00390000000292.B ENSGT00390000000292.A ENSGT00950000185967 ENSGT00730000111141 ENSGT00390000000447 ENSGT00390000013113 Flycatcher MODERN SPECIES KCNJ6 (ENSFALG00000023707) DYRK1A (ENSFALG00000024758) VPS26C (ENSFALG00000005166) ENSFALG00000005183 ENSFALG00000023874 ENSFALG00000026035 PIGP (ENSFALG00000005214) HLCS (ENSFALG00000005235) SIM2 (ENSFALG00000005247) CHAF1B (ENSFALG00000010423) MORC3 (ENSFALG00000010420) DOP1B (ENSFALG00000010414) CBR1 (ENSFALG00000024508) SETD4 (ENSFALG00000010408) ENSFALG00000028649 #22 ENSFALG00000024652 #22 ENSFALG00000027399 SLC5A3 (ENSFALG00000005093) KCNE2 (ENSFALG00000014136) SMIM11 (ENSFALG00000014135) #26 ENSFALG00000025411 ENSFALG00000025848 RCAN1 (ENSFALG00000024904) #24 ENSFALG00000028028 ENSFALG00000002370 ENSFALG00000002365 ENSFALG00000026064 ENSFALG00000002362 ENSFALG00000002352 ENSFALG00000002346 ENSFALG00000002323 Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960.f ENSGT00390000002960.e ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255.s #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00390000000292.B ENSGT00390000000292.A ENSGT00730000111141.k ENSGT00390000000447 ENSGT00390000013113 ENSGT00940000157065 Passeroidea ANCESTRAL SPECIES 10 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960.e ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255.s #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000000292.B ENSGT00390000000292.A ENSGT00730000111141.k ENSGT00390000000447 ENSGT00390000013113 ENSGT00940000157065 ENSGT00940000154065.b ENSGT00940000155131 ENSGT00940000160503 Zebra finch MODERN SPECIES ERG (ENSTGUG00000004998) KCNJ15 (ENSTGUG00000004997) KCNJ6 (ENSTGUG00000004993) DYRK1A (ENSTGUG00000004960) VPS26C (ENSTGUG00000027285) TTC3 (ENSTGUG00000004895) PIGP (ENSTGUG00000025829) HLCS (ENSTGUG00000005220) SIM2 (ENSTGUG00000004856) CLDN14 (ENSTGUG00000004853) CHAF1B (ENSTGUG00000004832) MORC3 (ENSTGUG00000004803) DOP1B (ENSTGUG00000004760) CBR1 (ENSTGUG00000019381) SETD4 (ENSTGUG00000004731) RUNX1 (ENSTGUG00000026657) #22 ENSTGUG00000028584 ENSTGUG00000020702 #23 RCAN1 (ENSTGUG00000020828) #24 KCNE1 (ENSTGUG00000027887) ENSTGUG00000024183 SMIM11 (ENSTGUG00000016312) #26 KCNE2 (ENSTGUG00000022758) ENSTGUG00000029395 SLC5A3 (ENSTGUG00000026353) ENSTGUG00000000464 ENSTGUG00000000472 ENSTGUG00000029533 ENSTGUG00000025938 ENSTGUG00000028289 ENSTGUG00000025287 Common canary MODERN SPECIES 11 ENSSCAG00000010502 #22 ENSSCAG00000010506 #22 ENSSCAG00000010509 DOP1B (ENSSCAG00000010522) MORC3 (ENSSCAG00000010568) CHAF1B (ENSSCAG00000010633) CLDN14 (ENSSCAG00000010639) SIM2 (ENSSCAG00000010649) ENSSCAG00000010696 ENSSCAG00000010713 ENSSCAG00000010716 B3GALT5 (ENSSCAG00000010720) SH3BGR (ENSSCAG00000010721) ENSSCAG00000010724 GET1 (ENSSCAG00000010727) ENSSCAG00000010730 ENSSCAG00000010735 Medium ground finch MODERN SPECIES 358 ENSGFOG00000002345 ENSGFOG00000002359 RUNX1 (ENSGFOG00000002370) #22 DOP1B (ENSGFOG00000002400) MORC3 (ENSGFOG00000002481) CHAF1B (ENSGFOG00000002522) CLDN14 (ENSGFOG00000002562) Great tit MODERN SPECIES KCNJ6 (ENSPMJG00000009621) DYRK1A (ENSPMJG00000009547) VPS26C (ENSPMJG00000009544) TTC3 (ENSPMJG00000009526) PIGP (ENSPMJG00000009524) ENSPMJG00000009522 HLCS (ENSPMJG00000009520) SIM2 (ENSPMJG00000009456) CLDN14 (ENSPMJG00000009452) CHAF1B (ENSPMJG00000009451) MORC3 (ENSPMJG00000009450) DOP1B (ENSPMJG00000009429) CBR1 (ENSPMJG00000009428) SETD4 (ENSPMJG00000009427) ENSPMJG00000009413 #22 ENSPMJG00000009359 #22 ATP5PO (ENSPMJG00000009358) MRPS6 (ENSPMJG00000009353) KCNE2 (ENSPMJG00000009286) SMIM11 (ENSPMJG00000009285) #26 ENSPMJG00000009284 KCNE1 (ENSPMJG00000009283) RCAN1 (ENSPMJG00000009281) #24 CLIC6 (ENSPMJG00000009278) #23 ENSPMJG00000008576 ENSPMJG00000008575 ENSPMJG00000008574 DONSON (ENSPMJG00000008520) CRYZL1 (ENSPMJG00000008517) ITSN1 (ENSPMJG00000006391) DNAJC28 (ENSPMJG00000006351) Passeriformes ANCESTRAL SPECIES 1 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255.t #22 ENSGT00940000159255.s #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00390000000292.B ENSGT00390000000292.A ENSGT00950000185967 ENSGT00730000111141 ENSGT00390000000447 Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255.t #22 ENSGT00940000159255.s #22 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT01030000235410 ENSGT00640000091610 #26 ENSGT00940000154497.B ENSGT00390000014606 ENSGT00940000161679 ENSGT00390000015060 ENSGT00390000000292.B ENSGT00390000000292.A ENSGT00950000185967 ENSGT00730000111141 ENSGT00390000000447 Passeriformes_g ANCESTRAL SPECIES ENSGT00940000159255.t #22 Passeroidea ANCESTRAL SPECIES ENSGT00940000159255.t #22 Common canary MODERN SPECIES 11 ENSSCAG00000010502 #22 ENSSCAG00000010506 #22 ENSSCAG00000010509 DOP1B (ENSSCAG00000010522) MORC3 (ENSSCAG00000010568) CHAF1B (ENSSCAG00000010633) CLDN14 (ENSSCAG00000010639) SIM2 (ENSSCAG00000010649) ENSSCAG00000010696 ENSSCAG00000010713 ENSSCAG00000010716 B3GALT5 (ENSSCAG00000010720) SH3BGR (ENSSCAG00000010721) ENSSCAG00000010724 GET1 (ENSSCAG00000010727) ENSSCAG00000010730 Flycatcher MODERN SPECIES KCNJ15 (ENSFALG00000025214) KCNJ6 (ENSFALG00000023707) DYRK1A (ENSFALG00000024758) VPS26C (ENSFALG00000005166) ENSFALG00000005183 ENSFALG00000023874 ENSFALG00000026035 PIGP (ENSFALG00000005214) HLCS (ENSFALG00000005235) SIM2 (ENSFALG00000005247) CHAF1B (ENSFALG00000010423) MORC3 (ENSFALG00000010420) DOP1B (ENSFALG00000010414) CBR1 (ENSFALG00000024508) SETD4 (ENSFALG00000010408) ENSFALG00000028649 #22 ENSFALG00000024652 #22 ENSFALG00000027399 SLC5A3 (ENSFALG00000005093) KCNE2 (ENSFALG00000014136) SMIM11 (ENSFALG00000014135) #26 ENSFALG00000025411 ENSFALG00000025848 RCAN1 (ENSFALG00000024904) #24 ENSFALG00000028028 ENSFALG00000002370 ENSFALG00000002365 ENSFALG00000026064 ENSFALG00000002362 ENSFALG00000002352 ENSFALG00000002346 Great tit MODERN SPECIES KCNJ15 (ENSPMJG00000009690) KCNJ6 (ENSPMJG00000009621) DYRK1A (ENSPMJG00000009547) VPS26C (ENSPMJG00000009544) TTC3 (ENSPMJG00000009526) PIGP (ENSPMJG00000009524) ENSPMJG00000009522 HLCS (ENSPMJG00000009520) SIM2 (ENSPMJG00000009456) CLDN14 (ENSPMJG00000009452) CHAF1B (ENSPMJG00000009451) MORC3 (ENSPMJG00000009450) DOP1B (ENSPMJG00000009429) CBR1 (ENSPMJG00000009428) SETD4 (ENSPMJG00000009427) ENSPMJG00000009413 #22 ENSPMJG00000009359 #22 ATP5PO (ENSPMJG00000009358) MRPS6 (ENSPMJG00000009353) KCNE2 (ENSPMJG00000009286) SMIM11 (ENSPMJG00000009285) #26 ENSPMJG00000009284 KCNE1 (ENSPMJG00000009283) RCAN1 (ENSPMJG00000009281) #24 CLIC6 (ENSPMJG00000009278) #23 ENSPMJG00000008576 ENSPMJG00000008575 ENSPMJG00000008574 DONSON (ENSPMJG00000008520) CRYZL1 (ENSPMJG00000008517) ITSN1 (ENSPMJG00000006391) Anura ANCESTRAL SPECIES 60 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 ENSGT00940000153577.A ENSGT00940000159255 #22 Leishan spiny toad MODERN SPECIES 130 ENSLLEG00000025085 RUNX1 (ENSLLEG00000024975) #22 Frog MODERN SPECIES 2 sim2 (ENSXETG00000013022) cldn14 (ENSXETG00000013019) chaf1b (ENSXETG00000013014) morc3 (ENSXETG00000013012) ENSXETG00000038435 ENSXETG00000040756 morc3.3 (ENSXETG00000039431) ENSXETG00000034570 ENSXETG00000040964 ENSXETG00000046257 morc3lp (ENSXETG00000040742) dop1b (ENSXETG00000014119) cbr1.3 (ENSXETG00000033405) setd4 (ENSXETG00000014132) ENSXETG00000043872 runx1 (ENSXETG00000034820) #22 gart (ENSXETG00000014148) patl2 (ENSXETG00000014167) son (ENSXETG00000047841) donson (ENSXETG00000027925) cryzl1 (ENSXETG00000014178) itsn1 (ENSXETG00000014182) atp5po (ENSXETG00000014198) ENSXETG00000039083 mrps6 (ENSXETG00000032139) SLC5A3 (ENSXETG00000041418) ENSXETG00000044550 ENSXETG00000047503 ENSXETG00000035956 KCNE1 (ENSXETG00000003637) rcan1 (ENSXETG00000045333) #24 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 362 runx1 (ENSLACG00000015930) #22 ENSLACG00000015752 runx1 (ENSLACG00000015604) #22 CLIC6 (ENSLACG00000015311) #23 RCAN1 (ENSLACG00000014722) #24 KCNE1 (ENSLACG00000014485) ENSLACG00000014218 C21orf140 (ENSLACG00000014183) KCNE2 (ENSLACG00000014074) ENSLACG00000012236 MRPS6 (ENSLACG00000011712) ATP5PO (ENSLACG00000011094) ENSLACG00000010044 ENSLACG00000008523 CRYZL1 (ENSLACG00000007718) DONSON (ENSLACG00000007022) PWP2 (ENSLACG00000006084) GATD3 (ENSLACG00000004885) Coelacanth MODERN SPECIES 362 runx1 (ENSLACG00000015930) #22 ENSLACG00000015752 runx1 (ENSLACG00000015604) #22 CLIC6 (ENSLACG00000015311) #23 RCAN1 (ENSLACG00000014722) #24 KCNE1 (ENSLACG00000014485) ENSLACG00000014218 C21orf140 (ENSLACG00000014183) KCNE2 (ENSLACG00000014074) ENSLACG00000012236 MRPS6 (ENSLACG00000011712) ATP5PO (ENSLACG00000011094) ENSLACG00000010044 ENSLACG00000008523 CRYZL1 (ENSLACG00000007718) DONSON (ENSLACG00000007022) Actinopterygii ANCESTRAL SPECIES 501 ENSGT00940000159602 #23 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141 Reedfish MODERN SPECIES 12 ENSECRG00000013882 ENSECRG00000013865 ENSECRG00000013849 ENSECRG00000013833 ENSECRG00000013819 ENSECRG00000013805 ENSECRG00000013794 ENSECRG00000013783 ENSECRG00000013770 ENSECRG00000013751 ENSECRG00000013740 ENSECRG00000013729 ENSECRG00000013719 ENSECRG00000013710 runx1 (ENSECRG00000013699) #22 DONSON (ENSECRG00000013691) ENSECRG00000013682 ENSECRG00000013671 ENSECRG00000013665 ENSECRG00000013654 ENSECRG00000013534 ENSECRG00000013305 ENSECRG00000013043 ENSECRG00000012976 ncam2 (ENSECRG00000012958) SLC5A7 (ENSECRG00000012945) GCC2 (ENSECRG00000012913) lims1 (ENSECRG00000012863) RANBP2 (ENSECRG00000012801) ENSECRG00000012786 Neopterygii ANCESTRAL SPECIES 387 ENSGT00940000159870 #24 ENSGT00940000154497.A ENSGT00940000159602 #23 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141 ENSGT00940000166048.a.b Spotted gar MODERN SPECIES 652 ENSLOCG00000010883 ENSLOCG00000010894 ENSLOCG00000010908 ENSLOCG00000010913 ENSLOCG00000010922 ENSLOCG00000010939 ENSLOCG00000010946 ENSLOCG00000017578 ENSLOCG00000017579 ENSLOCG00000010968 ENSLOCG00000017580 ENSLOCG00000010976 ENSLOCG00000017581 mrpl16 (ENSLOCG00000010979) ENSLOCG00000010988 #23 runx1 (ENSLOCG00000010990) #22 DONSON (ENSLOCG00000011005) ENSLOCG00000011021 ENSLOCG00000011034 ENSLOCG00000011040 ENSLOCG00000011044 ENSLOCG00000011053 ENSLOCG00000011066 ENSLOCG00000011074 ENSLOCG00000011081 efnb2a (ENSLOCG00000011084) arglu1a (ENSLOCG00000011090) ino80e (ENSLOCG00000011107) ENSLOCG00000011124 ncam2 (ENSLOCG00000011130) Osteoglossocephalai ANCESTRAL SPECIES 410 ENSGT00940000154497.A ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141 ENSGT00940000166048.a.b Osteoglossiformes ANCESTRAL SPECIES 88 ENSGT00940000158856.h ENSGT00940000157498.h ENSGT00940000164746 ENSGT00940000155177.b.g ENSGT00940000158367.c ENSGT00940000154840.b.d.a ENSGT01090000260459 ENSGT00940000154840.b.d.b ENSGT01050000244827.B ENSGT00940000154065.b ENSGT00940000159870.f #24 ENSGT00940000159255 #22 ENSGT00940000166048.a.b ENSGT00940000157860.r ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257.a ENSGT00530000063252.a.b ENSGT00940000155799 ENSGT00940000165208.c ENSGT00940000156271 ENSGT01020000230438.B.a.b.i ENSGT00390000002038 ENSGT00530000063907.d ENSGT00530000063169.b.b Asian bonytongue MODERN SPECIES 3 ARGLU1 (ENSSFOG00015009954) cryl1 (ENSSFOG00015009909) ENSSFOG00015009841 hsd3b2 (ENSSFOG00015009830) ENSSFOG00015009772 man1a2 (ENSSFOG00015009725) igsf3 (ENSSFOG00015009704) PTGFRN (ENSSFOG00015009688) ATP1A1 (ENSSFOG00015016357) ENSSFOG00015013249 ENSSFOG00015009535 ENSSFOG00015009573 mab21l3 (ENSSFOG00015009473) dnajc28 (ENSSFOG00015028973) RCAN1 (ENSSFOG00015009442) #24 runx1 (ENSSFOG00015031091) #22 ENSSFOG00015009350 NCAM2 (ENSSFOG00015009238) gart (ENSSFOG00015009090) n6amt1 (ENSSFOG00015009049) ADAMTS5 (ENSSFOG00015031640) ADAMTS1 (ENSSFOG00015032932) cyyr1 (ENSSFOG00015008961) appb (ENSSFOG00015008854) gabpa (ENSSFOG00015008813) jam2a (ENSSFOG00015026401) mrpl39 (ENSSFOG00015008772) ENSSFOG00015008741 mrpl16 (ENSSFOG00015008725) si:ch73-41e3.7 (ENSSFOG00015024751) trmt10c (ENSSFOG00015008704) P. kingsleyae MODERN SPECIES 107 tbx15 (ENSPKIG00000011827) ENSPKIG00000011810 tent5c (ENSPKIG00000011797) man1a2 (ENSPKIG00000011753) ENSPKIG00000011691 igsf3 (ENSPKIG00000011623) ENSPKIG00000011590 ENSPKIG00000011571 ENSPKIG00000011471 ENSPKIG00000011363 mab21l3 (ENSPKIG00000011309) dnajc28 (ENSPKIG00000011289) ENSPKIG00000011262 #24 runx1 (ENSPKIG00000011181) #22 ENSPKIG00000011114 ncam2 (ENSPKIG00000010979) gart (ENSPKIG00000010876) n6amt1 (ENSPKIG00000010822) ADAMTS5 (ENSPKIG00000010769) ADAMTS1 (ENSPKIG00000010736) cyyr1 (ENSPKIG00000010721) appb (ENSPKIG00000010598) gabpa (ENSPKIG00000010493) jam2a (ENSPKIG00000010412) mrpl39 (ENSPKIG00000010371) ENSPKIG00000010358 mrpl16 (ENSPKIG00000010334) trmt10c (ENSPKIG00000010307) ZBTB11 (ENSPKIG00000010269) Clupeocephala ANCESTRAL SPECIES 278 ENSGT00940000161679.b ENSGT00940000158367 ENSGT01030000234540.E ENSGT01030000238120 ENSGT00990000204406 ENSGT00610000086518 ENSGT00940000154840.b.e.a ENSGT01030000234765 ENSGT00940000154065.b ENSGT00940000154497.A ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 ENSGT00940000166048.a.b ENSGT00990000207892 ENSGT00940000155466.e.a ENSGT00390000016929 Otomorpha ANCESTRAL SPECIES 234 ENSGT00390000010543 ENSGT00940000155318.b.b ENSGT00940000155502 ENSGT00940000160594.g.b.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234621.F.c ENSGT00940000161679.b ENSGT00940000158367.e ENSGT00940000154840.b.e.a.a.a ENSGT01090000260459 ENSGT00940000154840.b.e.a.a.b ENSGT01030000234765 ENSGT00940000159870.k #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141.hb ENSGT00990000207892 Otophysi ANCESTRAL SPECIES 60 ENSGT01050000244897.a.b.b.a.b ENSGT00390000010543 ENSGT00940000155318.b.b ENSGT00940000155502 ENSGT00940000160594.g.b.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234621.F.c ENSGT00940000161679.b ENSGT00940000158367.e ENSGT01090000260564 ENSGT00940000154840.b.e.a.a.b ENSGT01030000234765 ENSGT00940000159870.k #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141.hb ENSGT00940000166048.a.b ENSGT00940000157860.o ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT01020000230438.B.a.b Characiphysae ANCESTRAL SPECIES 64 ENSGT00940000154840.b.e.a.a.a.a ENSGT01100000263585 ENSGT00940000154840.b.e.a.a.b.b.a.a ENSGT00940000154840.b.e.a.a.b.b.b ENSGT00940000154840.b.e.a.a.b.a ENSGT01030000234765 ENSGT00940000159870.k #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141.hb ENSGT00940000166048.a.b ENSGT00940000157860.o ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT01020000230438.B.a.b Characiphysae_b ANCESTRAL SPECIES 45 ENSGT00940000154840.b.e.a.a.a.a ENSGT01100000263585 ENSGT00940000154840.b.e.a.a.b.b.a.a ENSGT00940000154840.b.e.a.a.b.b.b ENSGT00940000154840.b.e.a.a.b.a ENSGT01030000234765 ENSGT00940000159870.k #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141.hb ENSGT00940000166048.a.b ENSGT00940000157860.o ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT01020000230438.B.a.b Characoidei ANCESTRAL SPECIES 42 ENSGT00940000154840.b.e.a.a.a.a ENSGT00940000154840.b.e.a.a.a.b ENSGT00940000154840.b.e.a.a.b.b.a.a ENSGT00940000154840.b.e.a.a.b.b.b ENSGT00940000154840.b.e.a.a.b.a ENSGT01030000234765 ENSGT00940000159870.k #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141.hb ENSGT00940000166048.a.b ENSGT00940000157860.o ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT01020000230438.B.a.b Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 3 ENSAMXG00000039945 ENSAMXG00000035368 ENSAMXG00000033272 ENSAMXG00000040380 atp1a1a.1 (ENSAMXG00000029963) ENSAMXG00000034255 ENSAMXG00000012162 ENSAMXG00000004129 ATP1A1 (ENSAMXG00000002883) ENSAMXG00000042461 ENSAMXG00000033135 ENSAMXG00000029891 #24 ENSAMXG00000033998 #23 urp2 (ENSAMXG00000004143) ENSAMXG00000038538 runx1 (ENSAMXG00000039960) #22 DONSON (ENSAMXG00000043405) ENSAMXG00000038259 ENSAMXG00000030353 ENSAMXG00000037069 ENSAMXG00000030626 ENSAMXG00000038047 NCAM2 (ENSAMXG00000017006) ENSAMXG00000034482 gart (ENSAMXG00000038146) n6amt1 (ENSAMXG00000029868) ENSAMXG00000034521 ADAMTS5 (ENSAMXG00000015190) ADAMTS1 (ENSAMXG00000015177) cyyr1 (ENSAMXG00000034969) ENSAMXG00000034550 Mexicana tetra MODERN SPECIES 583 runx1 (ENSAMXG00000033270) #22 ENSAMXG00000012232 Red-bellied piranha MODERN SPECIES 78 ENSPNAG00000009429 atp1a1a.1 (ENSPNAG00000009478) ENSPNAG00000009497 ENSPNAG00000009560 ENSPNAG00000009586 ENSPNAG00000009644 ENSPNAG00000009706 ATP1A1 (ENSPNAG00000009768) ENSPNAG00000009797 RCAN1 (ENSPNAG00000009852) #24 ENSPNAG00000009884 #23 urp2 (ENSPNAG00000009899) ENSPNAG00000009912 runx1 (ENSPNAG00000009945) #22 DONSON (ENSPNAG00000001357) ENSPNAG00000009991 ENSPNAG00000010013 NCAM2 (ENSPNAG00000010052) gart (ENSPNAG00000010137) n6amt1 (ENSPNAG00000010171) ENSPNAG00000010186 ENSPNAG00000001374 ADAMTS5 (ENSPNAG00000010236) ADAMTS1 (ENSPNAG00000001382) cyyr1 (ENSPNAG00000010262) APP (ENSPNAG00000010344) atp5pf (ENSPNAG00000010375) jam2a (ENSPNAG00000010396) mrpl39 (ENSPNAG00000010414) Electric eel MODERN SPECIES 308 atp1a1a.1 (ENSEEEG00000001193) ENSEEEG00000009344 ENSEEEG00000009365 ENSEEEG00000010023 ENSEEEG00000014323 ENSEEEG00000014324 ENSEEEG00000014325 #24 ENSEEEG00000014326 #23 runx1 (ENSEEEG00000014327) #22 DONSON (ENSEEEG00000014329) ENSEEEG00000014331 ENSEEEG00000014332 Channel catfish MODERN SPECIES 18 dmd (ENSIPUG00000007857) brat1 (ENSIPUG00000007734) ENSIPUG00000007711 kpnb3 (ENSIPUG00000007628) atp1a1a.1 (ENSIPUG00000007549) ENSIPUG00000007535 ENSIPUG00000007484 ENSIPUG00000007466 ENSIPUG00000007416 ENSIPUG00000007349 ENSIPUG00000007277 ENSIPUG00000007266 #24 ENSIPUG00000007261 ENSIPUG00000007247 #23 urp2 (ENSIPUG00000007224) runx1 (ENSIPUG00000007191) #22 donson (ENSIPUG00000007176) son (ENSIPUG00000007155) gart (ENSIPUG00000007090) ENSIPUG00000007052 ENSIPUG00000007026 ENSIPUG00000007017 ENSIPUG00000007007 ENSIPUG00000007002 ENSIPUG00000006986 ERBB4 (ENSIPUG00000006935) ube2f (ENSIPUG00000006844) ENSIPUG00000006820 ENSIPUG00000006802 ENSIPUG00000006771 ENSIPUG00000006738 Cyprinoidei ANCESTRAL SPECIES 34 ENSGT00950000182897.B.a.b.b.b ENSGT01030000234621.F.c ENSGT00940000161679.b ENSGT00940000158367.e ENSGT00980000200000 ENSGT00990000209906 ENSGT00940000154840.b.e.a.a.b.d.a ENSGT01090000260564 ENSGT00940000154840.b.e.a.a.b.d.b ENSGT00940000154840.b.e.a.a.a ENSGT00940000154840.b.e.a.a.b.c ENSGT01030000234765 ENSGT00940000159870.k #24 ENSGT00940000159602.e #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141.hb ENSGT00990000207892 ENSGT00940000157860.o ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT01020000230438.B.a.b ENSGT00390000005599 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 610 ENSGT00980000200000.a.b ENSGT00990000209906.a.a.b ENSGT00940000154840.b.e.a.a.b.d.a ENSGT01090000260564.a ENSGT00940000154840.b.e.a.a.b.d.b ENSGT01090000260564.b ENSGT00990000209906.a.b ENSGT00940000154840.b.e.a.a.a.d ENSGT00940000154840.b.e.a.a.b.c.a ENSGT01030000234765.c ENSGT00940000159870.k.a #24 ENSGT00940000159602.e.b #23 ENSGT01100000263672.b ENSGT00940000159255.c #22 ENSGT00390000000447.p ENSGT00730000111141.hb.b Goldfish MODERN SPECIES 18 SLITRK1 (ENSCARG00000070020) ENSCARG00000070018 atp1a1a.2 (ENSCARG00000069999) atp1a1a.3 (ENSCARG00000069992) ENSCARG00000069985 ENSCARG00000069988 ENSCARG00000069981 ENSCARG00000069976 ENSCARG00000069966 atp1a1a.1 (ENSCARG00000069890) atp1a1a.4 (ENSCARG00000069866) ENSCARG00000069864 ENSCARG00000069863 #24 ENSCARG00000069860 #23 urp2 (ENSCARG00000069859) runx1 (ENSCARG00000069840) #22 ENSCARG00000069830 ENSCARG00000069826 ENSCARG00000069824 ENSCARG00000069822 ENSCARG00000069820 ENSCARG00000069816 ENSCARG00000069811 ENSCARG00000069809 GGACT (ENSCARG00000069805) FARP1 (ENSCARG00000069717) kpnb3 (ENSCARG00000069653) ENSCARG00000069643 rap2ab (ENSCARG00000069641) mbnl2 (ENSCARG00000069639) OXGR1 (ENSCARG00000069636) Cyprininae_a ANCESTRAL SPECIES 158 ENSGT00980000200000.a.b ENSGT00990000209906.b ENSGT00980000200000.a.a.b.b.b ENSGT00990000209906.a.a.b ENSGT00990000209906.a.b ENSGT00940000154840.b.e.a.a.b.d.a ENSGT01090000260564.a ENSGT00940000154840.b.e.a.a.b.d.b ENSGT01090000260564.b ENSGT00940000154840.b.e.a.a.a.d ENSGT00940000154840.b.e.a.a.b.c.a ENSGT01030000234765.c ENSGT00940000159870.k.a #24 ENSGT00940000159602.e.b #23 ENSGT01100000263672.b ENSGT00940000159255.c #22 ENSGT00390000000447.p ENSGT00730000111141.hb.b Common carp reference MODERN SPECIES 27 ENSCCRG00000001284 ENSCCRG00000042961 ENSCCRG00000080429 ENSCCRG00000042977 ENSCCRG00000071466 ENSCCRG00000045341 ENSCCRG00000071944 atp1a1a.3 (ENSCCRG00000047297) ENSCCRG00000061258 ENSCCRG00000047294 atp1a1a.1 (ENSCCRG00000041328) ENSCCRG00000008933 ENSCCRG00000068422 #24 ENSCCRG00000008937 #23 urp2 (ENSCCRG00000065744) runx1 (ENSCCRG00000061572) #22 ENSCCRG00000040967 ENSCCRG00000053234 gart (ENSCCRG00000081314) n6amt1 (ENSCCRG00000037795) ADAMTS5 (ENSCCRG00000031430) ADAMTS1 (ENSCCRG00000041650) cyyr1 (ENSCCRG00000082869) APP (ENSCCRG00000021887) atp5pf (ENSCCRG00000066402) jam2a (ENSCCRG00000072838) ENSCCRG00000067716 ENSCCRG00000056818 mrpl16 (ENSCCRG00000072990) ENSCCRG00000009980 ENSCCRG00000009911 Golden-line barbel MODERN SPECIES 527 ENSSGRG00000045513 ENSSGRG00000045514 ENSSGRG00000045515 ENSSGRG00000045516 ENSSGRG00000045517 atp1a1a.3 (ENSSGRG00000046078) ENSSGRG00000046763 atp1a1a.2 (ENSSGRG00000046780) atp1a1a.1 (ENSSGRG00000047209) ENSSGRG00000053183 atp1a1a.4 (ENSSGRG00000053207) ENSSGRG00000053289 ENSSGRG00000053291 #24 ENSSGRG00000053292 #23 urp2 (ENSSGRG00000053293) runx1 (ENSSGRG00000053296) #22 DONSON (ENSSGRG00000053299) ENSSGRG00000053300 ENSSGRG00000053301 Cyprininae ANCESTRAL SPECIES 119 ENSGT01050000244897.a.b.b.a.b.b ENSGT00390000010543.l ENSGT00940000155318.b.b.b ENSGT00940000155502.t ENSGT00940000160594.g.b.b.b ENSGT00950000182897.B.a.b.b.b.f ENSGT01030000234621.F.c.i ENSGT00940000161679.b.a ENSGT00940000158367.e.d ENSGT00980000200000.b ENSGT00940000154840.b.e.a.a.a.c ENSGT01030000234765.d ENSGT00940000159870.k.b #24 ENSGT00940000159602.e.a #23 ENSGT01100000263672.a ENSGT00940000159255.d #22 ENSGT00390000000447.o ENSGT00730000111141.hb.a ENSGT00390000000292.B.q ENSGT00390000013073.g ENSGT00940000163827.b ENSGT00940000159090.d ENSGT00940000156815.c ENSGT00940000167257.c ENSGT00530000063252.a.b.a.a.c ENSGT00390000008902.jb.b ENSGT00940000165208.a.a ENSGT00940000156271 ENSGT01020000230438.B.a.b.h ENSGT00530000063907.d ENSGT00390000010779.a.b.b Goldfish MODERN SPECIES FARP1 (ENSCARG00000061791) kpnb3 (ENSCARG00000061440) rap2ab (ENSCARG00000061355) mbnl2 (ENSCARG00000061198) ENSCARG00000061089 ENSCARG00000061076 slc5a3a (ENSCARG00000061071) ENSCARG00000060936 ENSCARG00000060910 ENSCARG00000060886 atp1a1a.4 (ENSCARG00000060353) ENSCARG00000060325 RCAN1 (ENSCARG00000060311) #24 urp2 (ENSCARG00000060303) ENSCARG00000060293 #23 runx1 (ENSCARG00000059816) #22 DONSON (ENSCARG00000059762) ENSCARG00000059721 ENSCARG00000059691 ENSCARG00000059678 ENSCARG00000059669 spry2 (ENSCARG00000059657) ENSCARG00000059651 ENSCARG00000059641 ndfip2 (ENSCARG00000059625) ENSCARG00000059596 stk16 (ENSCARG00000059585) mnx2b (ENSCARG00000059558) ENSCARG00000059532 fn1b (ENSCARG00000031169) cpo (ENSCARG00000030462) Cyprininae_a ANCESTRAL SPECIES 125 ENSGT01050000244897.a.b.b.a.b.b ENSGT00390000010543.l ENSGT00940000155318.b.b.b ENSGT00940000155502.t ENSGT00940000160594.g.b.b.b ENSGT00950000182897.B.a.b.b.b.f ENSGT01030000234621.F.c.i ENSGT00940000161679.b.a ENSGT00940000158367.e.d ENSGT00980000200000.b ENSGT00940000154840.b.e.a.a.a.c ENSGT01030000234765.d ENSGT00940000159870.k.b #24 ENSGT00940000159602.e.a #23 ENSGT01100000263672.a ENSGT00940000159255.d #22 ENSGT00390000000447.o ENSGT00730000111141.hb.a ENSGT00390000000292.B.q ENSGT00390000013073.g ENSGT00940000163827.b ENSGT00940000159090.d ENSGT00940000156815.c ENSGT00940000167257.c ENSGT00530000063252.a.b.a.a.c ENSGT00390000008902.jb.b ENSGT00940000165208.a.a ENSGT00940000156271 ENSGT01020000230438.B.a.b.h ENSGT00530000063907.d ENSGT00390000010779.a.b.b Common carp reference MODERN SPECIES 22 kpnb3 (ENSCCRG00000015685) rap2ab (ENSCCRG00000076162) mbnl2 (ENSCCRG00000001118) OXGR1 (ENSCCRG00000081304) ENSCCRG00000081604 slc5a3a (ENSCCRG00000001278) ENSCCRG00000065938 ENSCCRG00000044098 ENSCCRG00000079575 atp1a1a.1 (ENSCCRG00000047364) ENSCCRG00000022238 ENSCCRG00000063571 #24 ENSCCRG00000058217 #23 urp2 (ENSCCRG00000008939) ENSCCRG00000074524 runx1 (ENSCCRG00000010272) #22 DONSON (ENSCCRG00000033892) ENSCCRG00000057640 ENSCCRG00000058365 ENSCCRG00000045487 ENSCCRG00000005735 ENSCCRG00000077599 ENSCCRG00000026134 ENSCCRG00000068748 ENSCCRG00000077027 ENSCCRG00000057598 ENSCCRG00000063703 ENSCCRG00000070268 GART (ENSCCRG00000082088) n6amt1 (ENSCCRG00000031105) ENSCCRG00000073371 Golden-line barbel MODERN SPECIES 1650 runx1 (ENSSGRG00000014003) #22 DONSON (ENSSGRG00000014000) ENSSGRG00000013990 Zebrafish MODERN SPECIES oxgr1a.3 (ENSDARG00000040247) oxgr1a.1 (ENSDARG00000033684) slc5a3a (ENSDARG00000010376) ENSDARG00000075505 ENSDARG00000040250 ENSDARG00000095102 ENSDARG00000093102 ENSDARG00000089477 atp1a1a.5 (ENSDARG00000040252) atp1a1a.3 (ENSDARG00000039131) atp1a1a.2 (ENSDARG00000007739) atp1a1a.1 (ENSDARG00000002791) atp1a1a.4 (ENSDARG00000001870) ENSDARG00000099108 #23 urp2 (ENSDARG00000067781) runx1 (ENSDARG00000087646) #22 n6amt1 (ENSDARG00000115421) gart (ENSDARG00000101089) adamts5 (ENSDARG00000100307) ADAMTS1 (ENSDARG00000103519) cyyr1 (ENSDARG00000103783) appa (ENSDARG00000104279) atp5pf (ENSDARG00000014313) jam2a (ENSDARG00000058996) ENSDARG00000113329 mrpl39 (ENSDARG00000041570) mrpl16 (ENSDARG00000075325) si:ch73-41e3.7 (ENSDARG00000089799) txnl4b (ENSDARG00000058962) trmt10c (ENSDARG00000041575) blzf1 (ENSDARG00000011299) Clupeiformes ANCESTRAL SPECIES 447 ENSGT01100000263585 ENSGT00940000154840.b.e.a.a.b ENSGT01030000234765 ENSGT00940000159870.k #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00730000111141.hb ENSGT00940000157860.o Denticle herring MODERN SPECIES 15 cyyr1 (ENSDCDG00000002872) ADAMTS1 (ENSDCDG00000002875) ADAMTS5 (ENSDCDG00000002888) n6amt1 (ENSDCDG00000002902) gart (ENSDCDG00000002929) ENSDCDG00000003058 atp1a1a.4 (ENSDCDG00000003539) ENSDCDG00000005475 ENSDCDG00000005478 ENSDCDG00000005480 ENSDCDG00000013894 ENSDCDG00000013903 #24 ENSDCDG00000013936 #23 ENSDCDG00000013965 ENSDCDG00000013982 runx1 (ENSDCDG00000014018) #22 DONSON (ENSDCDG00000014088) ENSDCDG00000014122 ENSDCDG00000014153 NCAM2 (ENSDCDG00000014431) ENSDCDG00000018074 ENSDCDG00000018076 ethe1 (ENSDCDG00000018080) ENSDCDG00000018083 drd2l (ENSDCDG00000018103) xrcc1 (ENSDCDG00000018478) ENSDCDG00000018491 ENSDCDG00000018495 ENSDCDG00000018504 ENSDCDG00000018509 SLC9A1 (ENSDCDG00000018574) Euteleosteomorpha ANCESTRAL SPECIES 129 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000155814.m ENSGT00940000159196 ENSGT00940000153981.A ENSGT00940000161679.b ENSGT00940000158367 ENSGT01030000234540.E ENSGT01090000260251 ENSGT00610000086518 ENSGT00940000154840.b.e.a ENSGT01030000234765 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 ENSGT00990000207892 Acanthomorphata ANCESTRAL SPECIES 141 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT01030000234765 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT00940000163254 Cod DUPLICATION Cod MODERN SPECIES 20 ENSGMOG00000000146 ENSGMOG00000033235 ENSGMOG00000034066 ENSGMOG00000002928 ENSGMOG00000002942 ENSGMOG00000025826 adarb1a (ENSGMOG00000002964) ENSGMOG00000023000 ENSGMOG00000013197 ENSGMOG00000036807 ENSGMOG00000032400 ENSGMOG00000023186 #24 ENSGMOG00000019125 #23 ENSGMOG00000026707 ENSGMOG00000014088 #22 ENSGMOG00000023264 #22 ENSGMOG00000005104 ENSGMOG00000022842 ENSGMOG00000027854 ENSGMOG00000032832 ENSGMOG00000034046 ENSGMOG00000007889 ENSGMOG00000005261 ENSGMOG00000027911 ENSGMOG00000027579 ENSGMOG00000033630 ENSGMOG00000034082 ENSGMOG00000027197 ENSGMOG00000027805 ENSGMOG00000028453 ENSGMOG00000029019 Cod MODERN SPECIES 20 ENSGMOG00000030009 ENSGMOG00000000146 ENSGMOG00000033235 ENSGMOG00000034066 ENSGMOG00000002928 ENSGMOG00000002942 ENSGMOG00000025826 adarb1a (ENSGMOG00000002964) ENSGMOG00000023000 ENSGMOG00000013197 ENSGMOG00000036807 ENSGMOG00000032400 ENSGMOG00000023186 #24 ENSGMOG00000019125 #23 ENSGMOG00000026707 ENSGMOG00000014088 #22 ENSGMOG00000023264 #22 ENSGMOG00000005104 ENSGMOG00000022842 ENSGMOG00000027854 ENSGMOG00000032832 ENSGMOG00000034046 ENSGMOG00000007889 ENSGMOG00000005261 ENSGMOG00000027911 ENSGMOG00000027579 ENSGMOG00000033630 ENSGMOG00000034082 ENSGMOG00000027197 ENSGMOG00000027805 ENSGMOG00000028453 Euacanthomorphacea ANCESTRAL SPECIES 26 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT01030000234765 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT01030000234635.a.b.a.b.a ENSGT00940000155318.b.b ENSGT00390000010543 ENSGT00940000156365 ENSGT00940000157860 ENSGT00390000000292.B ENSGT00390000013073 ENSGT01050000244823.d.b.a.b ENSGT01030000234614.A.l.b ENSGT00940000156167.a ENSGT00950000183034.A.g ENSGT00510000047027.c.a ENSGT00950000183152.B.c.a ENSGT00940000164706.a Pinecone sodierfish MODERN SPECIES 11 ENSMMDG00005003770 STEAP3 (ENSMMDG00005003930) C1QL2 (ENSMMDG00005003933) en1a (ENSMMDG00005003937) ENSMMDG00005003941 ENSMMDG00005003950 ENSMMDG00005003968 ENSMMDG00005003973 SLC5A3 (ENSMMDG00005004000) ENSMMDG00005005260 ENSMMDG00005012283 GPR180 (ENSMMDG00005012286) ENSMMDG00005012288 ENSMMDG00005012289 #24 ENSMMDG00005012299 #23 runx1 (ENSMMDG00005012382) #22 DONSON (ENSMMDG00005012490) ENSMMDG00005012493 cnot9 (ENSMMDG00005012494) ENSMMDG00005012527 slx9 (ENSMMDG00005013812) adarb1a (ENSMMDG00005013819) ENSMMDG00005013927 DDRGK1 (ENSMMDG00005014127) ENSMMDG00005014129 ddx4 (ENSMMDG00005014160) UBE3A (ENSMMDG00005016321) CNGA3 (ENSMMDG00005016743) kpnb3 (ENSMMDG00005016767) SEMA5B (ENSMMDG00005016835) CACNB4 (ENSMMDG00005016911) Percomorphaceae ANCESTRAL SPECIES 55 ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT01030000234635.a.b.a.b.a ENSGT00940000155318.b.b ENSGT00390000010543 ENSGT00940000156365 ENSGT00940000157860 ENSGT00390000000292.B ENSGT00390000013073 ENSGT01050000244823.d.b.a.b ENSGT01030000234614.A.l.b ENSGT00940000156167.a ENSGT00950000183034.A.g ENSGT00510000047027.c.a ENSGT00950000183152.B.c.a ENSGT00940000164706.a Tiger tail seahorse MODERN SPECIES 404 ENSHCOG00000004821 ENSHCOG00000004810 ENSHCOG00000004789 ENSHCOG00000004779 ENSHCOG00000004766 ENSHCOG00000004752 ENSHCOG00000004747 acss2 (ENSHCOG00000004732) mapre1b (ENSHCOG00000004667) ENSHCOG00000004630 dnmt3bb.1 (ENSHCOG00000004544) commd7 (ENSHCOG00000004498) nol4lb (ENSHCOG00000004462) ENSHCOG00000004433 ptk6b (ENSHCOG00000004425) runx1 (ENSHCOG00000004312) #22 DONSON (ENSHCOG00000003106) stk24b (ENSHCOG00000003096) ENSHCOG00000003069 gcga (ENSHCOG00000003043) dpp4 (ENSHCOG00000003037) gca (ENSHCOG00000003022) KCNH7 (ENSHCOG00000003005) ENSHCOG00000002988 ENSHCOG00000002981 ENSHCOG00000002971 ARHGEF19 (ENSHCOG00000002962) plekhm2 (ENSHCOG00000002938) ddost (ENSHCOG00000000874) ZBTB17 (ENSHCOG00000002882) ENSHCOG00000002876 Percomorphaceae_B ANCESTRAL SPECIES 22 ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 Ovalentaria ANCESTRAL SPECIES 23 ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 Atherinomorphae ANCESTRAL SPECIES 47 ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 Cyprinodontiformes ANCESTRAL SPECIES 66 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 Cyprinodontoidei ANCESTRAL SPECIES 62 ENSGT00940000165158.b ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00940000159255 #22 ENSGT00390000000447 Poeciliinae ANCESTRAL SPECIES 42 ENSGT00940000165158.b ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00390000016929 ENSGT00940000155466.e.a Poecilia ANCESTRAL SPECIES 67 ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00390000016929 ENSGT00940000155466.e.a NAME_6 ANCESTRAL SPECIES 537 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00390000016929 ENSGT00940000155466.e.a Amazon molly MODERN SPECIES 898 runx1 (ENSPFOG00000008944) #22 DONSON (ENSPFOG00000008811) gtf3c3 (ENSPFOG00000008683) HECW2 (ENSPFOG00000008113) Sailfin molly MODERN SPECIES 1390 runx1 (ENSPLAG00000011807) #22 ENSPLAG00000011811 gtf3c3 (ENSPLAG00000011875) ENSPLAG00000011908 Guppy MODERN SPECIES 450 ENSPREG00000018013 pudp (ENSPREG00000018021) nlgn4xa (ENSPREG00000018050) PRKX (ENSPREG00000018074) MXRA5 (ENSPREG00000018101) gyg2 (ENSPREG00000018121) cd99 (ENSPREG00000018142) dhrsx (ENSPREG00000018161) sowahcb (ENSPREG00000018168) cep70 (ENSPREG00000018184) adarb1a (ENSPREG00000018254) slx9 (ENSPREG00000018296) ENSPREG00000018338 ENSPREG00000018356 #24 ENSPREG00000018377 #23 runx1 (ENSPREG00000018387) #22 DONSON (ENSPREG00000018398) gtf3c3 (ENSPREG00000018422) HECW2 (ENSPREG00000018477) ENSPREG00000018586 ENSPREG00000018602 MTRF1 (ENSPREG00000018619) ENSPREG00000018630 ENSPREG00000018663 ENSPREG00000018828 jagn1b (ENSPREG00000018840) COL8A1 (ENSPREG00000018854) ENSPREG00000018870 ENSPREG00000018915 FILIP1L (ENSPREG00000019013) ENSPREG00000019034 Platyfish MODERN SPECIES 16 ENSXMAG00000023979 #26 pudp (ENSXMAG00000025726) nlgn4xa (ENSXMAG00000018908) PRKX (ENSXMAG00000018900) MXRA5 (ENSXMAG00000003206) gyg2 (ENSXMAG00000018872) cd99 (ENSXMAG00000018870) dhrsx (ENSXMAG00000025222) sowahcb (ENSXMAG00000018855) cep70 (ENSXMAG00000018852) adarb1a (ENSXMAG00000018829) slx9 (ENSXMAG00000023964) ENSXMAG00000018801 ENSXMAG00000004373 #24 ENSXMAG00000028175 #23 runx1 (ENSXMAG00000004396) #22 DONSON (ENSXMAG00000004408) gtf3c3 (ENSXMAG00000004413) ENSXMAG00000021098 HECW2 (ENSXMAG00000015751) NAME_4 ANCESTRAL SPECIES 426 ENSGT00940000156180.e ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00940000159255 #22 ENSGT00390000000447 Mummichog MODERN SPECIES 358 ENSFHEG00000008183 ENSFHEG00000008144 #24 ENSFHEG00000008124 #23 runx1 (ENSFHEG00000008114) #22 DONSON (ENSFHEG00000008087) ENSFHEG00000008075 nop58 (ENSFHEG00000008065) ENSFHEG00000008001 wdr12 (ENSFHEG00000007991) ical1 (ENSFHEG00000007945) FAM117B (ENSFHEG00000007927) bmpr2a (ENSFHEG00000007903) ENSFHEG00000007826 ENSFHEG00000007819 ENSFHEG00000000797 slc15a1b (ENSFHEG00000007716) stk24b (ENSFHEG00000007612) SLC4A10 (ENSFHEG00000007551) gcga (ENSFHEG00000006826) Sheepshead minnow MODERN SPECIES 863 ENSCVAG00000016318 #23 ENSCVAG00000016331 runx1 (ENSCVAG00000017806) #22 DONSON (ENSCVAG00000017910) ENSCVAG00000017923 ENSCVAG00000017935 ENSCVAG00000018008 Aplocheiloidei ANCESTRAL SPECIES 456 ENSGT00690000103830 ENSGT00940000159255 #22 Turquoise killifish MODERN SPECIES 1619 ENSNFUG00015011011 GTF3C3 (ENSNFUG00015010693) ENSNFUG00015010684 CARS2 (ENSNFUG00015010636) APG3L (ENSNFUG00015010599) ENSNFUG00015010583 ENSNFUG00015010578 ENSNFUG00015009821 RQCD1 (ENSNFUG00015009680) RCAN1B (ENSNFUG00015009664) #24 CLIC6 (ENSNFUG00015009645) #23 URP2 (ENSNFUG00015009633) ENSNFUG00015009629 ENSNFUG00015009621 ENSNFUG00015009602 runx1 (ENSNFUG00015009559) #22 pudp (ENSNFUG00015009538) cep41 (ENSNFUG00015009529) nlgn4xa (ENSNFUG00015009479) ENSNFUG00015009467 PRKX (ENSNFUG00015009453) ENSNFUG00015009445 ENSNFUG00015009305 GYG2 (ENSNFUG00015009233) CD99 (ENSNFUG00015009200) ENSNFUG00015009175 ENSNFUG00015009167 ENSNFUG00015009160 ENSNFUG00015009138 ENSNFUG00015009120 slx9 (ENSNFUG00015013889) Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 437 dmd (ENSKMAG00000012366) ENSKMAG00000012352 runx1 (ENSKMAG00000012336) #22 Mangrove rivulus MODERN SPECIES 1244 runx1 (ENSKMAG00000008309) #22 Oryzias ANCESTRAL SPECIES 40 ENSGT00940000155050.b ENSGT00940000157507 ENSGT00940000156564.b ENSGT00390000008490 ENSGT00940000160159 ENSGT00940000160394.a ENSGT00730000111141 ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00610000086518.b.a.e ENSGT00940000156089.e.a ENSGT00500000044939 ENSGT00390000005159.j ENSGT00940000156444.c ENSGT00940000155861.C.e ENSGT00940000164908 ENSGT00940000157360.c ENSGT00940000154657.A.d ENSGT00950000183165.a.a.a ENSGT00950000183038.a.b.b.b.r ENSGT00390000001718.b ENSGT00390000004923.C ENSGT00940000162768.B.b Oryzias_b ANCESTRAL SPECIES 50 ENSGT00940000158737.h ENSGT00940000155050.b ENSGT00940000157507 ENSGT00940000156564.b ENSGT00390000008490 ENSGT00940000160159 ENSGT00940000160394.a ENSGT00730000111141 ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00610000086518.b.a.e.b.b ENSGT00940000156089.e.a ENSGT00500000044939 ENSGT00390000005159.j ENSGT00940000156444.c ENSGT00940000155861.C.e ENSGT00940000164908 ENSGT00940000157360.c ENSGT00940000154657.A.d ENSGT00950000183165.a.a.a ENSGT00950000183038.a.b.b.b.r ENSGT00390000001718.b ENSGT00390000004923.C ENSGT00940000162768.B.b Indian medaka MODERN SPECIES 743 CNGA3 (ENSOMEG00000010486) UBE3A (ENSOMEG00000010563) ddx4 (ENSOMEG00000010651) ankrd10a (ENSOMEG00000010694) ENSOMEG00000010748 cryaa (ENSOMEG00000010775) CHRM4 (ENSOMEG00000010799) ENSOMEG00000010811 cep70 (ENSOMEG00000010898) adarb1a (ENSOMEG00000010969) slx9 (ENSOMEG00000010999) ENSOMEG00000011154 ENSOMEG00000011226 RCAN1 (ENSOMEG00000011264) #24 ENSOMEG00000011318 #23 runx1 (ENSOMEG00000011353) #22 DONSON (ENSOMEG00000011419) Javanese ricefish MODERN SPECIES 11 CNGA3 (ENSOJAG00000017585) UBE3A (ENSOJAG00000017694) ankrd10a (ENSOJAG00000018363) ENSOJAG00000018379 cryaa (ENSOJAG00000018404) CHRM4 (ENSOJAG00000018412) ENSOJAG00000018423 ENSOJAG00000018447 adarb1a (ENSOJAG00000018589) slx9 (ENSOJAG00000018700) PLCD4 (ENSOJAG00000018752) ENSOJAG00000019475 RCAN1 (ENSOJAG00000019486) #24 ENSOJAG00000019501 #23 ENSOJAG00000019517 runx1 (ENSOJAG00000019546) #22 DONSON (ENSOJAG00000019708) ENSOJAG00000019726 ENSOJAG00000019753 ENSOJAG00000019777 ENSOJAG00000019839 ENSOJAG00000019846 ENSOJAG00000019854 ENSOJAG00000019860 abi2b (ENSOJAG00000019884) tmem237b (ENSOJAG00000020131) MPP4 (ENSOJAG00000020155) ALS2 (ENSOJAG00000020343) ENSOJAG00000020803 ENSOJAG00000020823 ENSOJAG00000020853 Oryzias_a ANCESTRAL SPECIES 56 ENSGT00940000155050.b ENSGT00940000157507 ENSGT00940000156564.b ENSGT00390000008490 ENSGT00940000160159 ENSGT00940000160394.a ENSGT00730000111141 ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000156089.e.a ENSGT00500000044939 ENSGT00390000005159.j ENSGT00940000156444.c ENSGT00940000155861.C.e ENSGT00940000164908 ENSGT00940000157360.c ENSGT00940000154657.A.d ENSGT00950000183165.a.a.a ENSGT00950000183038.a.b.b.b.r ENSGT00390000001718.b ENSGT00390000004923.C ENSGT00940000162768.B.b ENSGT00940000154360.A.b.b Japanese Medaka HdrR MODERN SPECIES 11 ddx4 (ENSORLG00000020672) ankrd10a (ENSORLG00000020675) ENSORLG00000020677 cryaa (ENSORLG00000020678) ENSORLG00000020679 ENSORLG00000027334 ENSORLG00000028757 cep70 (ENSORLG00000025033) adarb1a (ENSORLG00000020682) slx9 (ENSORLG00000027350) ENSORLG00000020685 ENSORLG00000020687 ENSORLG00000028169 #24 ENSORLG00000020697 #23 ENSORLG00000028942 runx1 (ENSORLG00000029555) #22 ENSORLG00000020700 ENSORLG00000022467 ENSORLG00000025710 ENSORLG00000025162 ENSORLG00000030290 ENSORLG00000027640 ENSORLG00000029624 abi2b (ENSORLG00000000002) cyp20a1 (ENSORLG00000000005) tmem237b (ENSORLG00000000008) MPP4 (ENSORLG00000000012) ALS2 (ENSORLG00000000024) zgc:113142 (ENSORLG00000000026) inpp4ab (ENSORLG00000000030) ENSORLG00000022036 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 1743 ENSOSIG00000001705 #22 Chinese medaka MODERN SPECIES 550 CHRM4 (ENSOSIG00000010843) cep70 (ENSOSIG00000010845) adarb1a (ENSOSIG00000010873) slx9 (ENSOSIG00000011010) ENSOSIG00000011023 ENSOSIG00000016250 #23 ENSOSIG00000016253 runx1 (ENSOSIG00000016261) #22 Ovalentaria_B ANCESTRAL SPECIES 22 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000168183 ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000165189 ENSGT00610000086518.b.b ENSGT00950000183022.b ENSGT01050000244848.A.b.b ENSGT00390000016794.d ENSGT00940000153309 ENSGT00940000166665 ENSGT01030000234555.b ENSGT00940000153648.a ENSGT00940000157440.m.b ENSGT00950000182803.B.d.b ENSGT00980000198599 ENSGT00940000162067 ENSGT00940000181836 Pomacentridae ANCESTRAL SPECIES 193 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000164013 ENSGT00390000001225.s.b ENSGT00940000156180.e ENSGT00390000015709 ENSGT00940000155992.c.b ENSGT00390000009029 ENSGT00950000183003.a.a.b.c.a Pomacentridae_A ANCESTRAL SPECIES 107 ENSGT00940000156402.A.a ENSGT00940000154846.a.a ENSGT00390000008042.A.b.d ENSGT00940000156913.b.j.a ENSGT00940000160811.c.b ENSGT00390000014037.d ENSGT00940000154242.a.c ENSGT00390000005345 ENSGT01070000253766.C.o.b ENSGT00940000158831 ENSGT00940000156406.a ENSGT00940000153470.a.a.a.a ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000164013 ENSGT00390000001225.s.b ENSGT00940000156180.e ENSGT00390000015709 ENSGT00940000155992.c.b ENSGT00390000009029 ENSGT00950000183003.a.a.b.c.a Amphiprion ANCESTRAL SPECIES 130 ENSGT00940000156402.A.a ENSGT00940000154846.a.a ENSGT00390000008042.A.b.d ENSGT00940000156913.b.j.a ENSGT00940000160811.c.b ENSGT00390000014037.d ENSGT00940000154242.a.c ENSGT00390000005345 ENSGT01070000253766.C.o.b ENSGT00940000158831 ENSGT00940000156406.a ENSGT00940000153470.a.a.a.a ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000164013 ENSGT00390000001225.s.b ENSGT00940000156180.e ENSGT00390000015709 ENSGT00940000155992.c.b ENSGT00390000009029 ENSGT00950000183003.a.a.b.c.a Clown anemonefish MODERN SPECIES 3469 ENSAOCG00000016423 ENSAOCG00000016441 ENSAOCG00000016485 XKR6 (ENSAOCG00000001862) enpp4 (ENSAOCG00000016514) clic5a (ENSAOCG00000016540) mgat5 (ENSAOCG00000016625) RCAN1 (ENSAOCG00000001156) #24 ENSAOCG00000016689 #23 ENSAOCG00000016710 runx1 (ENSAOCG00000016739) #22 ENSAOCG00000016751 ENSAOCG00000016803 cnot9 (ENSAOCG00000016846) ENSAOCG00000016899 slx9 (ENSAOCG00000001977) adarb1a (ENSAOCG00000001169) cep70 (ENSAOCG00000016992) sowahcb (ENSAOCG00000017011) vamp1a (ENSAOCG00000017028) ENSAOCG00000001180 ENSAOCG00000001182 grap2a (ENSAOCG00000017139) radil2a (ENSAOCG00000017170) ENSAOCG00000017190 Orange clownfish MODERN SPECIES 16 ENSAPEG00000012668 DBI (ENSAPEG00000012645) STEAP3 (ENSAPEG00000012600) C1QL2 (ENSAPEG00000012569) en1a (ENSAPEG00000012557) ENSAPEG00000012504 ENSAPEG00000012490 ENSAPEG00000012355 XKR6 (ENSAPEG00000012311) enpp4 (ENSAPEG00000012288) clic5a (ENSAPEG00000012257) mgat5 (ENSAPEG00000012172) ENSAPEG00000012131 #24 ENSAPEG00000012095 #23 ENSAPEG00000012078 runx1 (ENSAPEG00000011997) #22 DONSON (ENSAPEG00000011848) ENSAPEG00000011757 cnot9 (ENSAPEG00000011704) ENSAPEG00000011685 slx9 (ENSAPEG00000011677) adarb1a (ENSAPEG00000011629) cep70 (ENSAPEG00000011536) sowahcb (ENSAPEG00000011503) ENSAPEG00000011488 GAPDH (ENSAPEG00000011459) ENSAPEG00000011443 MAP4K4 (ENSAPEG00000011232) chst10 (ENSAPEG00000011160) rpl31 (ENSAPEG00000011120) HECW2 (ENSAPEG00000011093) Spiny chromis MODERN SPECIES 1093 runx1 (ENSAPOG00000020606) #22 ENSAPOG00000020620 ENSAPOG00000020684 cnot9 (ENSAPOG00000020746) ENSAPOG00000020998 slx9 (ENSAPOG00000021046) adarb1a (ENSAPOG00000021275) cep70 (ENSAPOG00000021352) sowahcb (ENSAPOG00000021363) ENSAPOG00000021381 Bicolor damselfish MODERN SPECIES 886 RCAN1 (ENSSPAG00000003738) #24 ENSSPAG00000003713 #23 ENSSPAG00000003699 runx1 (ENSSPAG00000003609) #22 DONSON (ENSSPAG00000003574) ENSSPAG00000003543 cnot9 (ENSSPAG00000003506) ENSSPAG00000003366 ENSSPAG00000003331 adarb1a (ENSSPAG00000003299) Cichlidae ANCESTRAL SPECIES 51 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000168183 ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 Midas cichlid MODERN SPECIES 876 ENSACIG00000020574 zgc:194221 (ENSACIG00000020558) runx1 (ENSACIG00000020546) #22 DONSON (ENSACIG00000020486) Pseudocrenilabrinae ANCESTRAL SPECIES 39 ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000157622.a.a ENSGT00940000168183 ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 Nile tilapia MODERN SPECIES 14 ENSONIG00000034135 ENSONIG00000035430 ENSONIG00000038766 ENSONIG00000032049 ENSONIG00000041151 ENSONIG00000034270 TMBIM6 (ENSONIG00000040727) ENSONIG00000033779 ENSONIG00000033877 DMD (ENSONIG00000030280) RCAN1 (ENSONIG00000038773) #24 ENSONIG00000016608 #23 ENSONIG00000029587 ENSONIG00000026852 ENSONIG00000038962 runx1 (ENSONIG00000004914) #22 ENSONIG00000028939 ENSONIG00000004909 ENSONIG00000031249 ENSONIG00000034841 PRKX (ENSONIG00000032649) ENSONIG00000032921 MXRA5 (ENSONIG00000007340) gyg2 (ENSONIG00000007341) cd99 (ENSONIG00000007343) ENSONIG00000007346 ENSONIG00000033847 cep70 (ENSONIG00000007348) fam207a (ENSONIG00000041824) adarb1a (ENSONIG00000007354) PLCD4 (ENSONIG00000007357) Pseudocrenilabrinae_A ANCESTRAL SPECIES 51 ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000175436 ENSGT00940000159255 #22 ENSGT00390000000447 Haplochromini ANCESTRAL SPECIES 62 ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000175436 ENSGT00940000159255 #22 ENSGT00390000000447 Haplochromini_A ANCESTRAL SPECIES 63 ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000175436 ENSGT00940000159255 #22 ENSGT00390000000447 Haplochromini_B ANCESTRAL SPECIES 71 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 Zebra mbuna MODERN SPECIES 1105 PRKX (ENSMZEG00005021097) MXRA5 (ENSMZEG00005021092) gyg2 (ENSMZEG00005021089) cd99 (ENSMZEG00005021085) ENSMZEG00005021079 sowahcb (ENSMZEG00005021076) ENSMZEG00005021069 cep70 (ENSMZEG00005021063) adarb1a (ENSMZEG00005021060) slx9 (ENSMZEG00005021055) PLCD4 (ENSMZEG00005021037) ENSMZEG00005021030 ENSMZEG00005021028 #24 ENSMZEG00005019381 #23 ENSMZEG00005019333 runx1 (ENSMZEG00005019326) #22 ENSMZEG00005019322 ENSMZEG00005019306 ENSMZEG00005019290 nlgn4xa (ENSMZEG00005019277) pudp (ENSMZEG00005019264) pnpla4 (ENSMZEG00005019256) ENSMZEG00005019250 anos1a (ENSMZEG00005019232) ENSMZEG00005019225 ENSMZEG00005019221 ENSMZEG00005019200 ENSMZEG00005019195 ENSMZEG00005019191 SLC19A2 (ENSMZEG00005019184) atg3 (ENSMZEG00005019179) Eastern happy MODERN SPECIES 14 MXRA5 (ENSACLG00000009110) gyg2 (ENSACLG00000009374) cd99 (ENSACLG00000009385) dhrsx (ENSACLG00000009459) ENSACLG00000009471 cep70 (ENSACLG00000009499) adarb1a (ENSACLG00000009531) slx9 (ENSACLG00000009557) PLCD4 (ENSACLG00000009564) ENSACLG00000009998 ENSACLG00000010005 #24 ENSACLG00000010026 #23 ENSACLG00000010036 ENSACLG00000010041 ENSACLG00000010403 runx1 (ENSACLG00000010417) #22 ENSACLG00000010452 ENSACLG00000010476 ENSACLG00000010743 ENSACLG00000010745 ENSACLG00000010773 cyp4f3 (ENSACLG00000010786) ENSACLG00000010853 ENSACLG00000010883 ENSACLG00000010902 ENSACLG00000010944 SLC19A1 (ENSACLG00000010972) SLC19A1 (ENSACLG00000011059) P. nyererei MODERN SPECIES 859 ENSPNYG00000020587 runx1 (ENSPNYG00000020597) #22 ENSPNYG00000020619 ENSPNYG00000020643 Burton s mouthbrooder MODERN SPECIES 1351 runx1 (ENSHBUG00000017127) #22 ENSHBUG00000017147 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 384 ENSNBRG00000013656 ENSNBRG00000013638 ENSNBRG00000013601 gyg2 (ENSNBRG00000013536) cd99 (ENSNBRG00000013511) ZBED1 (ENSNBRG00000013505) ENSNBRG00000013466 sowahcb (ENSNBRG00000013455) adarb1a (ENSNBRG00000013437) slx9 (ENSNBRG00000013428) ENSNBRG00000013254 ENSNBRG00000013194 ENSNBRG00000013183 #24 ENSNBRG00000013130 #23 ENSNBRG00000013108 ENSNBRG00000013094 #22 ENSNBRG00000013085 #22 DONSON (ENSNBRG00000013049) Lyretail cichlid MODERN SPECIES 384 ENSNBRG00000013638 ENSNBRG00000013601 gyg2 (ENSNBRG00000013536) cd99 (ENSNBRG00000013511) ZBED1 (ENSNBRG00000013505) ENSNBRG00000013466 sowahcb (ENSNBRG00000013455) adarb1a (ENSNBRG00000013437) slx9 (ENSNBRG00000013428) ENSNBRG00000013254 ENSNBRG00000013194 ENSNBRG00000013183 #24 ENSNBRG00000013130 #23 ENSNBRG00000013108 ENSNBRG00000013094 #22 ENSNBRG00000013085 #22 DONSON (ENSNBRG00000013049) Percomorphaceae_C ANCESTRAL SPECIES 23 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00940000177894 ENSGT00940000163186 ENSGT00940000168183 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00970000198005 ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a Eupercaria ANCESTRAL SPECIES 23 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00970000198005 ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a Tetraodontidae ANCESTRAL SPECIES 22 ENSGT00940000157564 ENSGT00940000158665.d ENSGT00550000074800.a.b ENSGT00940000163195.B.a ENSGT00940000158859.f ENSGT01030000234621.F.c ENSGT00950000183071.a.a.a.e.b ENSGT00940000156862.z ENSGT00940000155232.t.a.b.b ENSGT00940000166422 ENSGT00390000016929 ENSGT00940000155466.e.a ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT01030000234635.a.b.a.b.a ENSGT00940000155318.b.b ENSGT00390000010543 ENSGT00940000156365.k ENSGT00940000157860 ENSGT00390000000292.B ENSGT00390000013073 ENSGT01050000244823.d.b.a.b ENSGT00940000156167.a ENSGT00950000183034.A.g ENSGT00510000047027.c.a ENSGT00940000164706.a ENSGT00530000063970.e ENSGT00390000013608 Tetraodon MODERN SPECIES 18 B3GALT1 (ENSTNIG00000013269) ABCB11 (ENSTNIG00000013268) DHRS9 (ENSTNIG00000013267) atp5f1b (ENSTNIG00000013266) ENSTNIG00000013265 klhl41b (ENSTNIG00000013264) oxgr1a.2 (ENSTNIG00000013263) ENSTNIG00000013262 dzip1 (ENSTNIG00000013261) CLDN10 (ENSTNIG00000013260) ENSTNIG00000013259 gtf3c3 (ENSTNIG00000013258) HECW2 (ENSTNIG00000013257) ENSTNIG00000013256 #24 ENSTNIG00000013255 #23 runx1 (ENSTNIG00000018690) #22 ENSTNIG00000008302 chn1 (ENSTNIG00000008303) ENSTNIG00000008304 FARP1 (ENSTNIG00000008305) ggact.3 (ENSTNIG00000000384) arl13b (ENSTNIG00000008306) NCAM2 (ENSTNIG00000008307) gart (ENSTNIG00000008308) n6amt1 (ENSTNIG00000008309) ENSTNIG00000001311 ENSTNIG00000001235 ENSTNIG00000001430 cbsa (ENSTNIG00000008310) u2af1 (ENSTNIG00000008311) zgc:172122 (ENSTNIG00000008312) Fugu MODERN SPECIES 20 ENSTRUG00000010685 B3GALT1 (ENSTRUG00000010755) ABCB11 (ENSTRUG00000010768) ENSTRUG00000011228 atp5f1b (ENSTRUG00000020643) klhl41b (ENSTRUG00000011704) oxgr1a.2 (ENSTRUG00000011768) ENSTRUG00000030771 dzip1 (ENSTRUG00000011852) CLDN10 (ENSTRUG00000020918) gtf3c3 (ENSTRUG00000012073) cldn10e (ENSTRUG00000025760) ENSTRUG00000022697 #24 ENSTRUG00000012478 #23 ENSTRUG00000033438 runx1 (ENSTRUG00000012611) #22 ENSTRUG00000012751 chn1 (ENSTRUG00000012830) FARP1 (ENSTRUG00000012915) ggact.3 (ENSTRUG00000013029) arl13b (ENSTRUG00000013035) ENSTRUG00000027813 NCAM2 (ENSTRUG00000013097) n6amt1 (ENSTRUG00000013586) ENSTRUG00000013620 ENSTRUG00000028009 ENSTRUG00000032340 ENSTRUG00000023883 ENSTRUG00000013644 ENSTRUG00000013705 cbsa (ENSTRUG00000013728) Eupecaria_A ANCESTRAL SPECIES 23 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00940000163186 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00970000198005 ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a Ballan wrasse MODERN SPECIES 543 ENSLBEG00000003149 #24 ENSLBEG00000003190 #23 ENSLBEG00000003226 runx1 (ENSLBEG00000003256) #22 DONSON (ENSLBEG00000003370) cyp4f3 (ENSLBEG00000003729) ENSLBEG00000003765 SLC19A1 (ENSLBEG00000003872) ENSLBEG00000004014 arpc2 (ENSLBEG00000004028) ENSLBEG00000004084 ENSLBEG00000004133 ENSLBEG00000004153 aamp (ENSLBEG00000004173) ENSLBEG00000004209 Eupecaria_B ANCESTRAL SPECIES 23 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00390000001225.s.b ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00970000198005 ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a Perciformes ANCESTRAL SPECIES 24 ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000165508 ENSGT00390000009987 ENSGT00950000183022.a.b ENSGT00390000010308 ENSGT00390000006347.b ENSGT00390000017193 ENSGT01030000234579.C.n ENSGT00940000158737.h ENSGT00940000155050.b ENSGT00940000157507 ENSGT00530000068760 ENSGT00940000156564.b ENSGT00390000008490 ENSGT00940000160159 Perciformes_a ANCESTRAL SPECIES 51 ENSGT00940000161153 ENSGT00940000165158.b ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00940000159255 #22 Channel bull blenny MODERN SPECIES 11 ENSCGOG00000000230 ENSCGOG00000000275 slx9 (ENSCGOG00000000344) adarb1a (ENSCGOG00000000348) ENSCGOG00000000371 #23 runx1 (ENSCGOG00000000380) #22 arhgap1 (ENSCGOG00000000400) ENSCGOG00000000408 SLC19A2 (ENSCGOG00000000406) atg3 (ENSCGOG00000000416) ENSCGOG00000000430 ENSCGOG00000000477 atp1b1b (ENSCGOG00000000490) CNGA3 (ENSCGOG00000000502) UBE3A (ENSCGOG00000000574) ddx4 (ENSCGOG00000000854) ankrd10a (ENSCGOG00000001229) ENSCGOG00000001231 cryaa (ENSCGOG00000001233) DGKZ (ENSCGOG00000001381) mdka (ENSCGOG00000003349) Pike perch MODERN SPECIES 504 runx1 (ENSSLUG00000004270) #22 Cottioidei ANCESTRAL SPECIES 71 ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 ENSGT00940000155992.c.b ENSGT00390000015709 ENSGT00940000156180.e ENSGT00940000164013 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000165508 ENSGT00390000009987 ENSGT00950000183022.a.b ENSGT00390000010308 ENSGT00390000006347.b ENSGT00390000017193 ENSGT01030000234579.C.n ENSGT00940000158737.h ENSGT00940000155050.b ENSGT00940000157507 ENSGT00530000068760 ENSGT00940000156564.b ENSGT00390000008490 ENSGT00940000160159 Lumpfish MODERN SPECIES 11 ENSCLMG00005008356 ENSCLMG00005008345 ENSCLMG00005008343 #24 ENSCLMG00005008263 #23 runx1 (ENSCLMG00005008089) #22 DONSON (ENSCLMG00005008086) ENSCLMG00005008085 ENSCLMG00005008083 ENSCLMG00005008082 SLC19A2 (ENSCLMG00005008081) atg3 (ENSCLMG00005008043) ENSCLMG00005008033 atp1b1b (ENSCLMG00005008029) CNGA3 (ENSCLMG00005008028) UBE3A (ENSCLMG00005007685) ENSCLMG00005007675 ENSCLMG00005007674 ENSCLMG00005007673 ENSCLMG00005007670 cryaa (ENSCLMG00005007669) Stickleback MODERN SPECIES PRKX (ENSGACG00000015210) MXRA5 (ENSGACG00000015213) gyg2 (ENSGACG00000015217) cd99 (ENSGACG00000015223) cep70 (ENSGACG00000015229) sowahcb (ENSGACG00000015234) ENSGACG00000015235 dhrsx (ENSGACG00000015237) sowahcb (ENSGACG00000015238) adarb1a (ENSGACG00000015240) slx9 (ENSGACG00000015252) ENSGACG00000015253 ENSGACG00000015263 #24 ENSGACG00000015268 #23 ENSGACG00000015274 runx1 (ENSGACG00000015276) #22 DONSON (ENSGACG00000015279) ENSGACG00000015284 ENSGACG00000015285 SLC19A2 (ENSGACG00000015286) ENSGACG00000015287 atg3 (ENSGACG00000015289) CARS2 (ENSGACG00000015295) ENSGACG00000015303 atp1b1b (ENSGACG00000015312) UBE3A (ENSGACG00000015321) ddx4 (ENSGACG00000015323) ENSGACG00000015328 ankrd10a (ENSGACG00000015330) ENSGACG00000015333 cryaa (ENSGACG00000015336) Eupecaria_C ANCESTRAL SPECIES 27 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000159699 ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00970000198005 ENSGT00950000183046.a.a.gb Gilthead seabream MODERN SPECIES 16 bmpr2a (ENSSAUG00010027386) ENSSAUG00010027390 ENSSAUG00010027391 ical1 (ENSSAUG00010027392) wdr12 (ENSSAUG00010027395) nop58 (ENSSAUG00010027398) ENSSAUG00010027401 ENSSAUG00010027403 tmem47 (ENSSAUG00010027404) DMD (ENSSAUG00010027426) gtf3c3 (ENSSAUG00010027506) HECW2 (ENSSAUG00010027530) ENSSAUG00010027564 #24 ENSSAUG00010027565 #23 ENSSAUG00010027568 runx1 (ENSSAUG00010027569) #22 DONSON (ENSSAUG00010027571) ENSSAUG00010027573 ENSSAUG00010027585 ENSSAUG00010017729 CYP4F8 (ENSSAUG00010017733) ENSSAUG00010017746 SLC19A1 (ENSSAUG00010017749) IL-8R (ENSSAUG00010017750) arpc2 (ENSSAUG00010017751) ENSSAUG00010017752 ENSSAUG00010017753 ENSSAUG00010017754 aamp (ENSSAUG00010017757) HDAC4 (ENSSAUG00010018215) PRPS1L1 (ENSSAUG00010020338) Eupercaria_incertae_sedis ANCESTRAL SPECIES 31 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000159699 ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a European seabass MODERN SPECIES 15 ENSDLAG00005011814 ENSDLAG00005011823 ENSDLAG00005011885 ENSDLAG00005014225 ENSDLAG00005027374 ENSDLAG00005014275 ENSDLAG00005014280 ENSDLAG00005014289 ENSDLAG00005014333 ENSDLAG00005014343 ENSDLAG00005014348 ENSDLAG00005014380 ENSDLAG00005027014 #24 ENSDLAG00005014686 #23 ENSDLAG00005034337 ENSDLAG00005014722 #22 ENSDLAG00005014922 ENSDLAG00005015022 ENSDLAG00005016233 ENSDLAG00005028957 ENSDLAG00005016303 ENSDLAG00005031317 ENSDLAG00005030657 ENSDLAG00005027425 ENSDLAG00005032507 ENSDLAG00005016997 WDR12 (ENSDLAG00005017100) ENSDLAG00005029320 BMPR2 (ENSDLAG00005017266) ENSDLAG00005017838 ENSDLAG00005019928 Large yellow croaker MODERN SPECIES 107 ENSLCRG00005001632 runx1 (ENSLCRG00005001487) #22 ENSLCRG00005021904 Percomorphaceae_D ANCESTRAL SPECIES 23 ENSGT00940000157507 ENSGT00940000155050.b ENSGT00940000158737.h ENSGT01030000234579.C.n ENSGT00390000017193 ENSGT00390000006347.b ENSGT00390000010308 ENSGT00950000183022.a.b ENSGT00390000009987 ENSGT00940000165508 ENSGT00940000160630 ENSGT00940000178385 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00970000198005 ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a Carangaria ANCESTRAL SPECIES 23 ENSGT00940000157507 ENSGT00940000155050.b ENSGT00940000158737.h ENSGT01030000234579.C.n ENSGT00390000017193 ENSGT00390000006347.b ENSGT00390000010308 ENSGT00950000183022.a.b ENSGT00390000009987 ENSGT00940000165508 ENSGT00940000160630 ENSGT00940000178385 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00920000150296 ENSGT01020000230582 ENSGT00440000033720.a.a.b ENSGT00940000161153 ENSGT00940000165158.b ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a Pleuronectoidei ANCESTRAL SPECIES 92 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT01020000230582 ENSGT00440000033720.a.a.b ENSGT00940000165158.b ENSGT00940000161153 ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000164022 ENSGT00940000156180.e ENSGT00390000015709 Turbot MODERN SPECIES stk11ip (ENSSMAG00000011056) ENSSMAG00000011100 inha (ENSSMAG00000011124) ENSSMAG00000022872 ENSSMAG00000028249 ptger2a (ENSSMAG00000011189) ENSSMAG00000011201 gpr137c (ENSSMAG00000011218) ENSSMAG00000011238 irs2a (ENSSMAG00000011262) ENSSMAG00000011267 ENSSMAG00000011288 ENSSMAG00000026985 #24 ENSSMAG00000011307 #23 ENSSMAG00000011341 ENSSMAG00000011350 #22 ENSSMAG00000011395 ENSSMAG00000028093 anos1a (ENSSMAG00000011432) ENSSMAG00000038116 pudp (ENSSMAG00000031108) nlgn4xa (ENSSMAG00000011566) PRKX (ENSSMAG00000011540) MXRA5 (ENSSMAG00000033585) gyg2 (ENSSMAG00000009257) cd99 (ENSSMAG00000028075) ZBED1 (ENSSMAG00000037113) dhrsx (ENSSMAG00000009324) ENSSMAG00000009359 cep70 (ENSSMAG00000009376) adarb1a (ENSSMAG00000009423) Tongue sole MODERN SPECIES 5 ENSCSEG00000013474 ENSCSEG00000013465 FDX1 (ENSCSEG00000013461) TMEM163 (ENSCSEG00000013455) nlgn4xa (ENSCSEG00000013431) PRKX (ENSCSEG00000013410) MXRA5 (ENSCSEG00000013402) gyg2 (ENSCSEG00000013389) cd99 (ENSCSEG00000013377) ENSCSEG00000013363 slx9 (ENSCSEG00000013348) ENSCSEG00000013340 #24 ENSCSEG00000013317 #23 ENSCSEG00000013310 ENSCSEG00000013300 runx1 (ENSCSEG00000013279) #22 ENSCSEG00000013269 ENSCSEG00000013254 ENSCSEG00000013245 anos1a (ENSCSEG00000013223) ENSCSEG00000013211 STS (ENSCSEG00000013200) pudp (ENSCSEG00000013188) APP (ENSCSEG00000013131) cyyr1 (ENSCSEG00000013125) ADAMTS1 (ENSCSEG00000013122) ADAMTS5 (ENSCSEG00000011567) ENSCSEG00000011549 kdm6al (ENSCSEG00000011466) FUNDC1 (ENSCSEG00000011436) cenpl (ENSCSEG00000011426) Carangaria_A ANCESTRAL SPECIES 23 ENSGT00940000157507 ENSGT00940000155050.b ENSGT00940000158737.h ENSGT01030000234579.C.n ENSGT00390000017193 ENSGT00390000006347.b ENSGT00390000010308.d ENSGT00950000183022.a.b ENSGT00390000009987 ENSGT00940000165508 ENSGT00940000160630 ENSGT00940000178385 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00920000150296 ENSGT01020000230582 ENSGT00440000033720.a.a.b ENSGT00940000161153 ENSGT00940000165158.b ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000163186 ENSGT00940000168183 ENSGT00940000164022 Barramundi perch MODERN SPECIES 324 runx1 (ENSLCAG00010017316) #22 DONSON (ENSLCAG00010017359) ENSLCAG00010017372 ENSLCAG00010017374 anos1a (ENSLCAG00010017376) STS (ENSLCAG00010017380) ENSLCAG00010017392 pudp (ENSLCAG00010017397) nlgn4xa (ENSLCAG00010017408) Seriola ANCESTRAL SPECIES 47 ENSGT00940000157507 ENSGT00940000155050.b ENSGT00940000158737.h ENSGT01030000234579.C.n ENSGT00390000017193 ENSGT00390000006347.b ENSGT00390000010308.d ENSGT00950000183022.a.b ENSGT00390000009987 ENSGT00940000165508 ENSGT00940000160630 ENSGT00940000178385 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00920000150296 ENSGT01020000230582 ENSGT00440000033720.a.a.b ENSGT00940000161153 ENSGT00940000165158.b ENSGT00390000014753 ENSGT00940000156607.a.a ENSGT00940000159832 ENSGT00940000159942.a.c.a ENSGT00940000161628 ENSGT00940000154344.b ENSGT00940000164022 ENSGT00950000183003.a.a.b.c.a ENSGT00390000009029 Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 3147 ankrd10a (ENSSLDG00000015476) ddx4 (ENSSLDG00000015312) UBE3A (ENSSLDG00000015239) CNGA3 (ENSSLDG00000015216) atp1b1b (ENSSLDG00000015154) ENSSLDG00000015129 ENSSLDG00000015088 atg3 (ENSSLDG00000015032) SLC19A2 (ENSSLDG00000015009) ENSSLDG00000015000 arhgap1 (ENSSLDG00000014978) ENSSLDG00000014963 RCAN1 (ENSSLDG00000014941) #24 ENSSLDG00000014919 #23 ENSSLDG00000014901 runx1 (ENSSLDG00000014875) #22 ENSSLDG00000014865 #22 DONSON (ENSSLDG00000014741) ENSSLDG00000014664 ENSSLDG00000014636 ENSSLDG00000014626 anos1a (ENSSLDG00000014603) STS (ENSSLDG00000014588) ENSSLDG00000014573 pudp (ENSSLDG00000014549) nlgn4xa (ENSSLDG00000014531) PRKX (ENSSLDG00000014506) MXRA5 (ENSSLDG00000014480) gyg2 (ENSSLDG00000014009) cd99 (ENSSLDG00000013853) dhrsx (ENSSLDG00000013811) Yellowtail amberjack MODERN SPECIES 3147 ddx4 (ENSSLDG00000015312) UBE3A (ENSSLDG00000015239) CNGA3 (ENSSLDG00000015216) atp1b1b (ENSSLDG00000015154) ENSSLDG00000015129 ENSSLDG00000015088 atg3 (ENSSLDG00000015032) SLC19A2 (ENSSLDG00000015009) ENSSLDG00000015000 arhgap1 (ENSSLDG00000014978) ENSSLDG00000014963 RCAN1 (ENSSLDG00000014941) #24 ENSSLDG00000014919 #23 ENSSLDG00000014901 runx1 (ENSSLDG00000014875) #22 ENSSLDG00000014865 #22 DONSON (ENSSLDG00000014741) ENSSLDG00000014664 ENSSLDG00000014636 ENSSLDG00000014626 anos1a (ENSSLDG00000014603) STS (ENSSLDG00000014588) ENSSLDG00000014573 pudp (ENSSLDG00000014549) nlgn4xa (ENSSLDG00000014531) PRKX (ENSSLDG00000014506) MXRA5 (ENSSLDG00000014480) gyg2 (ENSSLDG00000014009) cd99 (ENSSLDG00000013853) dhrsx (ENSSLDG00000013811) sowahcb (ENSSLDG00000013778) Greater amberjack MODERN SPECIES 7 ankrd10a (ENSSDUG00000022041) ENSSDUG00000022034 ddx4 (ENSSDUG00000022015) UBE3A (ENSSDUG00000022003) CNGA3 (ENSSDUG00000021992) atp1b1b (ENSSDUG00000021981) ENSSDUG00000021977 ENSSDUG00000021941 atg3 (ENSSDUG00000021919) SLC19A2 (ENSSDUG00000021912) ENSSDUG00000021909 ENSSDUG00000021902 ENSSDUG00000021899 RCAN1 (ENSSDUG00000021893) #24 ENSSDUG00000021760 #23 runx1 (ENSSDUG00000020634) #22 DONSON (ENSSDUG00000020494) ENSSDUG00000020387 ENSSDUG00000020330 ENSSDUG00000020301 ENSSDUG00000020287 ENSSDUG00000020264 ENSSDUG00000020225 ENSSDUG00000020207 ENSSDUG00000020201 anos1a (ENSSDUG00000020157) STS (ENSSDUG00000020141) ENSSDUG00000020129 pudp (ENSSDUG00000020114) nlgn4xa (ENSSDUG00000019018) PRKX (ENSSDUG00000018892) Anabantaria ANCESTRAL SPECIES 23 ENSGT00940000157507 ENSGT00940000155050.b ENSGT00940000158737.h ENSGT01030000234579.C.n ENSGT00390000017193 ENSGT00390000006347.b ENSGT00390000010308 ENSGT00950000183022.a.b ENSGT00390000009987 ENSGT00940000165508 ENSGT00940000160630 ENSGT00940000178385 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234555.a.b.f.b ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a ENSGT00940000155972.A Zig-zag eel MODERN SPECIES 11 ENSMAMG00000003496 ankrd10a (ENSMAMG00000024434) ENSMAMG00000003574 ENSMAMG00000003752 ENSMAMG00000003777 ENSMAMG00000003801 ENSMAMG00000003850 ENSMAMG00000003825 ENSMAMG00000003872 ENSMAMG00000003889 ENSMAMG00000003902 ENSMAMG00000027568 ENSMAMG00000003935 #23 ENSMAMG00000003979 #24 ENSMAMG00000027079 RUNX1 (ENSMAMG00000004023) #22 ENSMAMG00000004082 ENSMAMG00000004151 ENSMAMG00000004193 ENSMAMG00000004229 ENSMAMG00000004263 SLITRK6 (ENSMAMG00000004266) ENSMAMG00000004278 ENSMAMG00000004286 ENSMAMG00000004303 ENSMAMG00000004333 LYPD6 (ENSMAMG00000025816) mmadhca (ENSMAMG00000004437) rnd3a (ENSMAMG00000027887) ENSMAMG00000004507 ENSMAMG00000004532 Anabantoidei ANCESTRAL SPECIES 23 ENSGT00940000157507 ENSGT00940000155050.b ENSGT00940000158737.h ENSGT01030000234579.C.n ENSGT00390000017193 ENSGT00390000006347.b ENSGT00390000010308 ENSGT00950000183022.a.b ENSGT00390000009987 ENSGT00940000165508 ENSGT00940000160630 ENSGT00940000178385 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT00690000103830 ENSGT00940000159255 #22 ENSGT00390000000447 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT01060000248575.D.c.b.a.a ENSGT00940000163254 ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a ENSGT00940000155972.A ENSGT00940000155995.e.a Climbing perch MODERN SPECIES 11 ENSATEG00000011867 ankrd10a (ENSATEG00000011856) ENSATEG00000011704 ENSATEG00000011668 ENSATEG00000011615 ENSATEG00000011557 ENSATEG00000011534 ENSATEG00000011523 ENSATEG00000011476 ENSATEG00000011463 ENSATEG00000011459 ENSATEG00000011449 ENSATEG00000011433 ENSATEG00000011339 #24 ENSATEG00000011317 #23 ENSATEG00000011270 #22 ENSATEG00000011128 ENSATEG00000011112 ENSATEG00000011091 ENSATEG00000011004 ENSATEG00000010176 ENSATEG00000009943 ENSATEG00000009929 ENSATEG00000009893 ENSATEG00000009862 ENSATEG00000009794 ENSATEG00000009743 ENSATEG00000009672 ICA1L (ENSATEG00000009712) ENSATEG00000009441 ENSATEG00000009277 Siamese fighting fish MODERN SPECIES 10 atg3 (ENSBSLG00000005206) SLC19A2 (ENSBSLG00000005152) ENSBSLG00000005127 ENSBSLG00000004958 ENSBSLG00000000690 ENSBSLG00000000685 ENSBSLG00000000678 ENSBSLG00000000642 ENSBSLG00000000616 ENSBSLG00000000598 ENSBSLG00000000516 ENSBSLG00000000503 ENSBSLG00000000477 #24 ENSBSLG00000000456 #23 ENSBSLG00000000445 runx1 (ENSBSLG00000000437) #22 DONSON (ENSBSLG00000000408) HECW2 (ENSBSLG00000007203) gtf3c3 (ENSBSLG00000006214) DMD (ENSBSLG00000005767) tmem47 (ENSBSLG00000005615) ENSBSLG00000005578 ENSBSLG00000005523 nop58 (ENSBSLG00000005262) wdr12 (ENSBSLG00000005049) ical1 (ENSBSLG00000004845) FAM117B (ENSBSLG00000004622) bmpr2a (ENSBSLG00000004517) ENSBSLG00000004041 slc15a1b (ENSBSLG00000003010) stk24b (ENSBSLG00000002894) Protacanthopterygii ANCESTRAL SPECIES 46 ENSGT00940000162114 ENSGT00940000155375.n ENSGT00940000154443.e.c ENSGT00940000159196 ENSGT00940000153981.A ENSGT00940000161679.b ENSGT00940000158367 ENSGT01030000234540.E ENSGT01090000260251 ENSGT00610000086518 ENSGT00940000154840.b.e.a.c ENSGT01030000234765 ENSGT00940000159870 #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255 #22 ENSGT00940000172034 ENSGT00390000000447 ENSGT00730000111141 ENSGT00940000166048.a.b ENSGT00940000156916 ENSGT00940000154633.id.b ENSGT00940000154633.id.a ENSGT00940000157559 ENSGT00530000063927.a.b ENSGT00940000160555 ENSGT00940000157300 ENSGT00940000154334 ENSGT00940000157498 ENSGT00940000158856 ENSGT00940000156336 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1946 ENSGT00940000159255.o.a.a #22 ENSGT00940000172034 Salmoninae_a ANCESTRAL SPECIES 622 ENSGT00940000159255.o.a.a #22 ENSGT00390000000447.r.a.b Salmo ANCESTRAL SPECIES 84 ENSGT00940000171515.f ENSGT00940000162114.e ENSGT00940000155375.n.b ENSGT00940000154443.e.c.b.a ENSGT00940000159196.j.b ENSGT00940000153981.A.f ENSGT00940000161679.b.c.b ENSGT00940000158367.h ENSGT01030000234540.E ENSGT01090000260251.e ENSGT00610000086518.d.b.b.b.c ENSGT00940000154840.b.e.a.c.b.a ENSGT01030000234765.a ENSGT00940000159602.m.b #23 ENSGT01100000263672.f ENSGT00940000159255.o.a.a #22 ENSGT00390000000447.r.a.b ENSGT00940000172034 ENSGT00940000159255.o.a.b #22 ENSGT00390000000447.q ENSGT00940000166048.a.b.f ENSGT00940000156916.ib.d ENSGT00940000154633.id.b.c ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.b.a.a ENSGT00940000157358.b ENSGT01050000244864.B.b.a.a.g ENSGT01030000234513.B.b.d.a.d ENSGT00390000003152.c.a.b ENSGT00940000156984.a.a.a ENSGT01050000244840.B.l.b.a.b ENSGT00950000183184.a.a.b.f River trout MODERN SPECIES 32 ddx3xa (ENSSTUG00000031022) TGDS (ENSSTUG00000030908) GPR180 (ENSSTUG00000030880) slc5a3a (ENSSTUG00000030745) PTGFRN (ENSSTUG00000030732) ENSSTUG00000030707 ENSSTUG00000030697 ENSSTUG00000030677 ENSSTUG00000030666 ENSSTUG00000030552 ATP1A1 (ENSSTUG00000029980) ENSSTUG00000029943 ENSSTUG00000029928 #24 ENSSTUG00000029909 #23 urp2 (ENSSTUG00000029905) runx1 (ENSSTUG00000029812) #22 ENSSTUG00000029799 DONSON (ENSSTUG00000029783) ENSSTUG00000029759 ENSSTUG00000029756 ENSSTUG00000029743 ENSSTUG00000029706 ENSSTUG00000029701 ENSSTUG00000029698 ENSSTUG00000029691 ENSSTUG00000029682 ENSSTUG00000029675 ENSSTUG00000029660 ENSSTUG00000029652 pspc1 (ENSSTUG00000029639) GJA3 (ENSSTUG00000029627) Atlantic salmon MODERN SPECIES 7 ENSSSAG00000079694 ENSSSAG00000079697 slc5a3a (ENSSSAG00000085714) ENSSSAG00000079707 ENSSSAG00000079711 ENSSSAG00000091051 ENSSSAG00000119303 ENSSSAG00000010297 ENSSSAG00000040883 ENSSSAG00000097582 ENSSSAG00000088702 ENSSSAG00000092493 ENSSSAG00000042673 #24 ENSSSAG00000042678 #23 urp2 (ENSSSAG00000091650) runx1 (ENSSSAG00000086519) #22 ENSSSAG00000042724 ENSSSAG00000042713 ENSSSAG00000051632 ENSSSAG00000089239 ENSSSAG00000051650 ENSSSAG00000051657 ENSSSAG00000098624 ENSSSAG00000084476 ENSSSAG00000102898 ENSSSAG00000051659 ENSSSAG00000051660 PSPC1 (ENSSSAG00000040822) GJA3 (ENSSSAG00000105529) ENSSSAG00000093185 SAP18 (ENSSSAG00000091496) Salmoninae ANCESTRAL SPECIES 1605 ENSGT00940000159255.o.a.b #22 ENSGT00390000000447.q Huchen DUPLICATION Huchen MODERN SPECIES 1854 ENSHHUG00000006543 ENSHHUG00000006526 ENSHHUG00000006504 runx1 (ENSHHUG00000006421) #22 DONSON (ENSHHUG00000006277) ENSHHUG00000006268 ENSHHUG00000006233 ENSHHUG00000006229 ENSHHUG00000006220 ENSHHUG00000006213 ENSHHUG00000006144 ENSHHUG00000006141 pspc1 (ENSHHUG00000006121) GJA3 (ENSHHUG00000006096) ENSHHUG00000006092 ENSHHUG00000006043 Huchen MODERN SPECIES 2274 runx1 (ENSHHUG00000051303) #22 DONSON (ENSHHUG00000051301) ENSHHUG00000051300 ENSHHUG00000051298 FDX1 (ENSHHUG00000051294) ENSHHUG00000051291 ENSHHUG00000051289 ENSHHUG00000051287 ENSHHUG00000051286 ENSHHUG00000051283 pspc1 (ENSHHUG00000051277) GJA3 (ENSHHUG00000051276) ENSHHUG00000051247 ENSHHUG00000051215 Salmoninae_a ANCESTRAL SPECIES 59 ENSGT00940000161679.b.c ENSGT00940000158367.g ENSGT00970000194096.a ENSGT00610000086518.d.a ENSGT01090000260251.e ENSGT00610000086518.d.b.b.b ENSGT00940000154840.b.e.a.c.b ENSGT00940000154840.b.e.a.d ENSGT01030000234765.b ENSGT00940000159870.j #24 ENSGT00940000159602.m.a #23 ENSGT01100000263672 ENSGT00940000159255.p #22 ENSGT00390000000447.r.b ENSGT00940000172034 ENSGT00940000159255.o.a.b #22 ENSGT00390000000447.q ENSGT00940000159255.o.b #22 ENSGT00390000000447.r.a.a ENSGT00730000111141 ENSGT00940000166048.a.b ENSGT00990000207892 ENSGT00940000156916.ib ENSGT00940000154633.id.b ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.b.a.a ENSGT01050000244840.B.k ENSGT00950000183184.a.a.b ENSGT01020000230624 ENSGT00940000154360.A.b.b.b ENSGT00940000154360.A.b.b.a ENSGT00940000162768.B.b.c Salmo ANCESTRAL SPECIES 84 ENSGT00940000154443.e.c.b.a ENSGT00940000159196.j.b ENSGT00940000153981.A.f ENSGT00940000161679.b.c.b ENSGT00940000158367.h ENSGT01030000234540.E ENSGT01090000260251.e ENSGT00610000086518.d.b.b.b.c ENSGT00940000154840.b.e.a.c.b.a ENSGT01030000234765.a ENSGT00940000159602.m.b #23 ENSGT01100000263672.f ENSGT00940000159255.o.a.a #22 ENSGT00390000000447.r.a.b ENSGT00940000172034 ENSGT00940000159255.o.a.b #22 ENSGT00390000000447.q ENSGT00940000166048.a.b.f ENSGT00940000156916.ib.d ENSGT00940000154633.id.b.c ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.b.a.a ENSGT00940000157358.b ENSGT01050000244864.B.b.a.a.g ENSGT01030000234513.B.b.d.a.d ENSGT00390000003152.c.a.b ENSGT00940000156984.a.a.a ENSGT01050000244840.B.l.b.a.b ENSGT00950000183184.a.a.b.f ENSGT00940000154360.A.b.b.a ENSGT00940000162768.B.b.c.e ENSGT00950000183022.b.p Atlantic salmon MODERN SPECIES 8 ENSSSAG00000119794 slc5a3a (ENSSSAG00000122098) PTGFRN (ENSSSAG00000073103) ENSSSAG00000079285 ENSSSAG00000085505 ENSSSAG00000068973 ENSSSAG00000099420 ENSSSAG00000079714 ENSSSAG00000007175 ATP1A1 (ENSSSAG00000119031) ATP1A1 (ENSSSAG00000041746) ENSSSAG00000087114 #24 ENSSSAG00000108199 ENSSSAG00000113409 #23 urp2 (ENSSSAG00000108132) runx1 (ENSSSAG00000097353) #22 ENSSSAG00000051617 ENSSSAG00000109318 ENSSSAG00000082716 ADX (ENSSSAG00000079200) ENSSSAG00000018866 ENSSSAG00000038283 ENSSSAG00000082960 ENSSSAG00000097584 pspc1 (ENSSSAG00000109737) GJA3 (ENSSSAG00000105322) ENSSSAG00000085814 sap18 (ENSSSAG00000114554) ENSSSAG00000109657 ENSSSAG00000079224 ENSSSAG00000098158 Salmoninae ANCESTRAL SPECIES ENSGT00940000159255.o.b #22 Salmoninae_a ANCESTRAL SPECIES 59 ENSGT00970000194096.a ENSGT00610000086518.d.a ENSGT01090000260251.e ENSGT00610000086518.d.b.b.b ENSGT00940000154840.b.e.a.c.b ENSGT00940000154840.b.e.a.d ENSGT01030000234765.b ENSGT00940000159870.j #24 ENSGT00940000159602.m.a #23 ENSGT01100000263672 ENSGT00940000159255.p #22 ENSGT00390000000447.r.b ENSGT00940000172034 ENSGT00940000159255.o.a.b #22 ENSGT00390000000447.q ENSGT00940000159255.o.b #22 ENSGT00390000000447.r.a.a ENSGT00730000111141 ENSGT00940000166048.a.b ENSGT00990000207892 ENSGT00940000156916.ib ENSGT00940000154633.id.b ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.b.a.a ENSGT01050000244840.B.k ENSGT00950000183184.a.a.b ENSGT01020000230624 ENSGT00940000154360.A.b.b.b ENSGT00940000154360.A.b.b.a ENSGT00940000162768.B.b.c ENSGT00950000183022.b ENSGT00940000165423.a.b Salmo ANCESTRAL SPECIES 72 ENSGT00940000155375.n.a ENSGT00940000154443.e.c.a ENSGT00940000159196.j.a ENSGT00940000153981.A.e ENSGT00940000161679.b.c.a ENSGT00940000158367.g ENSGT00970000194096.a ENSGT00990000204406 ENSGT00610000086518.d.b.a.b ENSGT00940000154840.b.e.a.c.b.b ENSGT00940000154840.b.e.a.d.f ENSGT01030000234765.b ENSGT00940000159870.j #24 ENSGT00940000159602.m.a #23 ENSGT01100000263672.e ENSGT00940000159255.o.b #22 ENSGT00390000000447.r.a.a ENSGT00730000111141 ENSGT00940000166048.a.b.e ENSGT00940000156916.ib.c ENSGT00940000154633.id.b.d ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.b.a.b ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.b.b ENSGT00940000157358.a ENSGT01050000244864.B.b.a.a.h ENSGT01030000234513.B.b.d.a.c ENSGT00390000003152.c.a.a ENSGT00940000156984.a.a.b ENSGT01070000253972.b ENSGT01050000244840.B.l.b.a.a ENSGT00950000183184.a.a.b.e River trout MODERN SPECIES 36 ddx3xa (ENSSTUG00000025835) TGDS (ENSSTUG00000025848) GPR180 (ENSSTUG00000025932) slc5a3a (ENSSTUG00000025996) ENSSTUG00000026001 ENSSTUG00000026036 ENSSTUG00000026052 ENSSTUG00000026064 ENSSTUG00000026255 ENSSTUG00000026259 ATP1A1 (ENSSTUG00000026430) ENSSTUG00000031470 #23 ENSSTUG00000031496 ENSSTUG00000031513 #24 urp2 (ENSSTUG00000031525) runx1 (ENSSTUG00000031539) #22 DONSON (ENSSTUG00000031814) ENSSTUG00000031820 ENSSTUG00000031847 ENSSTUG00000031886 ENSSTUG00000031894 ENSSTUG00000031907 ENSSTUG00000031915 pspc1 (ENSSTUG00000031930) GJA3 (ENSSTUG00000031945) ENSSTUG00000000276 sap18 (ENSSTUG00000000813) ENSSTUG00000000826 ENSSTUG00000000849 ENSSTUG00000000851 ENSSTUG00000000856 Salmoninae ANCESTRAL SPECIES 240 ENSGT00970000197763 ENSGT00940000159196.j.b ENSGT00940000153981.A ENSGT00940000161679.b.c ENSGT00940000158367.g ENSGT00970000194096.a ENSGT00610000086518.d.a ENSGT00610000086518.c ENSGT01090000260251 ENSGT00610000086518.d.b.b.b ENSGT00940000154840.b.e.a.c.b ENSGT01030000234765.b ENSGT00940000159870.j #24 ENSGT00940000159602 #23 ENSGT01100000263672 ENSGT00940000159255.p #22 ENSGT00390000000447.r ENSGT00730000111141 ENSGT00940000166048.a.b ENSGT00990000207892 ENSGT00940000156916.ib ENSGT00940000154633.id.b ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.b.a.b ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.b.b ENSGT00940000157358 ENSGT01050000244864.B.b.a.a ENSGT01030000234513.B.b.d.a ENSGT00390000003152.c.a ENSGT00940000156984.a.a.a ENSGT00940000169167 ENSGT00940000172021 Salmoninae_a ANCESTRAL SPECIES 59 ENSGT00940000161679.b.c ENSGT00940000158367.g ENSGT00970000194096.a ENSGT00610000086518.d.a ENSGT01090000260251.e ENSGT00610000086518.d.b.b.b ENSGT00940000154840.b.e.a.c.b ENSGT00940000154840.b.e.a.d ENSGT01030000234765.b ENSGT00940000159870.j #24 ENSGT00940000159602.m.a #23 ENSGT01100000263672 ENSGT00940000159255.p #22 ENSGT00390000000447.r.b ENSGT00940000172034 ENSGT00940000159255.o.a.b #22 ENSGT00390000000447.q ENSGT00940000159255.o.b #22 ENSGT00390000000447.r.a.a ENSGT00730000111141 ENSGT00940000166048.a.b ENSGT00990000207892 ENSGT00940000156916.ib ENSGT00940000154633.id.b ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.b.a.a ENSGT01050000244840.B.k ENSGT00950000183184.a.a.b ENSGT01020000230624 Oncorhynchus ANCESTRAL SPECIES 74 ENSGT00940000155814.m.c ENSGT00940000166383.c.a ENSGT00530000063715.b.h ENSGT01050000244891.C.c.b.p.a.b ENSGT00940000161898.d ENSGT00940000171515.e ENSGT00940000162114.f.a ENSGT00940000155375.n.c ENSGT00940000154443.e.c.b.a ENSGT00940000159196.j.a.b ENSGT00940000153981.A.e ENSGT00940000161679.b.c.d ENSGT00940000158367.g ENSGT00970000194096.a.d ENSGT00990000204406 ENSGT00940000159255.p #22 ENSGT00390000000447.r.a.a ENSGT00730000111141.ab ENSGT00940000166048.a.b.d ENSGT00990000207892 ENSGT00940000156916.ib.f ENSGT00940000154633.id.b.e ENSGT01100000263507.E.a.b.a.a.a.a.a ENSGT00940000157358.d ENSGT01050000244864.B.b.a.a.j ENSGT01030000234513.B.b.d.b ENSGT00390000003152.c.a.b ENSGT00940000156984.a.a.a ENSGT00940000169167 ENSGT01050000244840.B.k.a ENSGT00950000183184.a.a.b.g Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 28 ENSOMYG00000005448 ENSOMYG00000004735 ENSOMYG00000004706 slc5a3a (ENSOMYG00000004682) ENSOMYG00000004669 ENSOMYG00000004649 ENSOMYG00000067109 ENSOMYG00000004515 ENSOMYG00000003267 ENSOMYG00000058049 cu051 (ENSOMYG00000068238) ENSOMYG00000002790 #24 ENSOMYG00000002774 #23 ENSOMYG00000002732 ENSOMYG00000002707 runx1 (ENSOMYG00000002684) #22 ENSOMYG00000002624 ENSOMYG00000002594 ENSOMYG00000002523 ENSOMYG00000002504 ENSOMYG00000034326 ENSOMYG00000002479 ENSOMYG00000052800 ENSOMYG00000067190 ENSOMYG00000002470 ENSOMYG00000073526 PSPC1 (ENSOMYG00000002428) GJA3 (ENSOMYG00000073080) ENSOMYG00000002315 ENSOMYG00000002293 ENSOMYG00000002274 Rainbow trout MODERN SPECIES 9 ENSOMYG00000010050 ENSOMYG00000009973 slc5a3a (ENSOMYG00000009933) ENSOMYG00000009922 ENSOMYG00000009898 ENSOMYG00000009884 ENSOMYG00000060255 ENSOMYG00000009807 ENSOMYG00000061608 ENSOMYG00000055078 ENSOMYG00000009596 ENSOMYG00000009394 ENSOMYG00000062878 #24 ENSOMYG00000009386 #23 ENSOMYG00000061614 ENSOMYG00000009319 #22 ENSOMYG00000009295 ENSOMYG00000009265 ENSOMYG00000009226 ENSOMYG00000009208 ENSOMYG00000009170 ENSOMYG00000009136 ENSOMYG00000009129 ENSOMYG00000009084 ENSOMYG00000059082 PSPC1 (ENSOMYG00000009078) GJA3 (ENSOMYG00000052165) ENSOMYG00000009054 ENSOMYG00000009047 ENSOMYG00000070224 ENSOMYG00000059995 Oncorhynchus_a ANCESTRAL SPECIES 92 ENSGT00940000153981.A.e ENSGT00940000161679.b.c.d ENSGT00940000158367.g ENSGT00970000194096.a.d ENSGT00990000204406 ENSGT00940000161679.b.c.c ENSGT00940000158367.h ENSGT00970000194096.a.c ENSGT00610000086518.d.a ENSGT00940000154840.b.e.a.c.b.c ENSGT00940000154840.b.e.a.d ENSGT01030000234765.b ENSGT00940000159870.j.b #24 ENSGT00940000159602.m.a.a #23 ENSGT01100000263672 ENSGT00940000159255.p #22 ENSGT00390000000447.r.a.a ENSGT00730000111141.ab Coho salmon DUPLICATION Coho salmon MODERN SPECIES 25 ENSOKIG00005014853 ENSOKIG00005014550 ENSOKIG00005014299 TGDS (ENSOKIG00005014267) GPR180 (ENSOKIG00005014115) slc5a3a (ENSOKIG00005014102) ENSOKIG00005014076 ENSOKIG00005014059 ENSOKIG00005014037 ENSOKIG00005008917 ENSOKIG00005008635 ENSOKIG00005008616 ENSOKIG00005008603 #24 ENSOKIG00005008588 #23 ENSOKIG00005008570 RUNX1 (ENSOKIG00005008348) #22 DONSON (ENSOKIG00005008327) ENSOKIG00005004445 ENSOKIG00005004430 ENSOKIG00005004387 ENSOKIG00005004351 ENSOKIG00005004288 ENSOKIG00005004242 ENSOKIG00005004232 ENSOKIG00005004227 ENSOKIG00005004224 pspc1 (ENSOKIG00005004129) GJA3 (ENSOKIG00005004111) ENSOKIG00005004107 ENSOKIG00005004099 ENSOKIG00005004084 Coho salmon MODERN SPECIES 7 ENSOKIG00005011976 TGDS (ENSOKIG00005012487) GPR180 (ENSOKIG00005012502) slc5a3a (ENSOKIG00005012508) ENSOKIG00005012513 ENSOKIG00005012541 ENSOKIG00005012547 ENSOKIG00005012591 ENSOKIG00005012617 ENSOKIG00005012627 ATP1A1 (ENSOKIG00005012666) ENSOKIG00005012892 RCAN1 (ENSOKIG00005012900) #24 ENSOKIG00005012913 #23 urp2 (ENSOKIG00005013027) runx1 (ENSOKIG00005013037) #22 DONSON (ENSOKIG00005013072) ENSOKIG00005013078 ENSOKIG00005013094 ENSOKIG00005013122 ENSOKIG00005013134 ENSOKIG00005013146 ENSOKIG00005013152 ENSOKIG00005013162 ENSOKIG00005013168 PSPC1 (ENSOKIG00005013178) GJA3 (ENSOKIG00005013233) ENSOKIG00005013241 ENSOKIG00005013244 ENSOKIG00005013254 ENSOKIG00005013270 Chinook salmon MODERN SPECIES 629 runx1 (ENSOTSG00005022833) #22 ENSOTSG00005022836 ENSOTSG00005022839 ENSOTSG00005022841 ENSOTSG00005022842 ENSOTSG00005022843 Northern pike MODERN SPECIES 21 ddx3xa (ENSELUG00000004613) TGDS (ENSELUG00000004517) GPR180 (ENSELUG00000004484) slc5a3a (ENSELUG00000004466) ENSELUG00000004437 ENSELUG00000004373 ENSELUG00000004351 ENSELUG00000004230 ENSELUG00000004181 ATP1A1 (ENSELUG00000026762) ENSELUG00000029789 ENSELUG00000004064 RCAN1 (ENSELUG00000004039) #24 ENSELUG00000004009 #23 urp2 (ENSELUG00000001229) runx1 (ENSELUG00000003963) #22 ENSELUG00000034433 DONSON (ENSELUG00000003909) ENSELUG00000003878 ENSELUG00000003810 FDX1 (ENSELUG00000003799) ENSELUG00000003781 ENSELUG00000034287 pspc1 (ENSELUG00000003746) GJA3 (ENSELUG00000003684) GJB6 (ENSELUG00000003670) sap18 (ENSELUG00000003652) FGF14 (ENSELUG00000003618) ENSELUG00000029449 ENSELUG00000003596 FAM171B (ENSELUG00000003581) Elephant shark MODERN SPECIES 1637 C21orf62 (ENSCMIG00000016498) ENSCMIG00000016495 ENSCMIG00000016490 ENSCMIG00000016486 ENSCMIG00000016484 ENSCMIG00000016482 ENSCMIG00000016481 tmem50b (ENSCMIG00000016479) dnajc28 (ENSCMIG00000016476) gart (ENSCMIG00000016456) ENSCMIG00000016439 DONSON (ENSCMIG00000016436) ENSCMIG00000016433 runx1 (ENSCMIG00000016424) #22 ENSCMIG00000016336 #23 RCAN1 (ENSCMIG00000016307) #24 ENSCMIG00000016305 ENSCMIG00000016303 ENSCMIG00000016301 atp5po (ENSCMIG00000016295) slc5a3a (ENSCMIG00000016292) ITSN1 (ENSCMIG00000016253) ENSCMIG00000016214 ENSCMIG00000016198 cbr1 (ENSCMIG00000016191) cbr1 (ENSCMIG00000016172) DOP1B (ENSCMIG00000016140) MORC3 (ENSCMIG00000016088) ENSCMIG00000016073