Rodentia_B ANCESTRAL SPECIES ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00940000161095 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00960000186843 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 ENSGT00390000010146 ENSGT00940000155665.j ENSGT01030000234573.A.b.a ENSGT00940000156209 ENSGT00940000154396.b.b ENSGT00940000160185 ENSGT00940000156301 ENSGT00940000155190 ENSGT00730000111209 Myomorpha ANCESTRAL SPECIES 12 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00940000161095 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00960000186843 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Muroidea ANCESTRAL SPECIES 6 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00940000161095 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00960000186843 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00940000161095 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Murinae ANCESTRAL SPECIES 5 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00940000166371 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Mus ANCESTRAL SPECIES 7 ENSGT00940000153304.C #7 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Shrew mouse MODERN SPECIES 17 Tyw3 (MGP_PahariEiJ_G0027206) #7 Cryz (MGP_PahariEiJ_G0027207) #8 Erich3 (MGP_PahariEiJ_G0027208) #9 Tnni3k (MGP_PahariEiJ_G0027209) #10 Fpgt (MGP_PahariEiJ_G0027210) #11 Lrriq3 (MGP_PahariEiJ_G0027211) #12 Negr1 (MGP_PahariEiJ_G0027212) #13 Zranb2 (MGP_PahariEiJ_G0027213) #14 Ptger3 (MGP_PahariEiJ_G0027214) #15 Cth (MGP_PahariEiJ_G0027215) #16 Ankrd13c (MGP_PahariEiJ_G0027216) #17 Srsf11 (MGP_PahariEiJ_G0027217) #18 Lrrc40 (MGP_PahariEiJ_G0027218) #19 Lrrc7 (MGP_PahariEiJ_G0027219) #20 Depdc1a (MGP_PahariEiJ_G0027220) #21 Rpe65 (MGP_PahariEiJ_G0027221) #22 Wls (MGP_PahariEiJ_G0027222) #23 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000153304.C #7 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Ryukyu mouse MODERN SPECIES 12 Cryz (MGP_CAROLIEiJ_G0025756) #8 Erich3 (MGP_CAROLIEiJ_G0025757) #9 MGP_CAROLIEiJ_G0025758 #10 Fpgt (MGP_CAROLIEiJ_G0025759) #11 Lrriq3 (MGP_CAROLIEiJ_G0025760) #12 MGP_CAROLIEiJ_G0025761 Negr1 (MGP_CAROLIEiJ_G0025762) #13 Zranb2 (MGP_CAROLIEiJ_G0025763) #14 Ptger3 (MGP_CAROLIEiJ_G0025764) #15 Cth (MGP_CAROLIEiJ_G0025765) #16 Ankrd13c (MGP_CAROLIEiJ_G0025766) #17 Srsf11 (MGP_CAROLIEiJ_G0025767) #18 Lrrc40 (MGP_CAROLIEiJ_G0025768) #19 Lrrc7 (MGP_CAROLIEiJ_G0025769) #20 Depdc1a (MGP_CAROLIEiJ_G0025770) #21 Rpe65 (MGP_CAROLIEiJ_G0025771) #22 Wls (MGP_CAROLIEiJ_G0025772) #23 MGP_CAROLIEiJ_G0025773 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000153304.C #7 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Mouse MODERN SPECIES 12 Tyw3 (ENSMUSG00000047583) #7 Cryz (ENSMUSG00000028199) #8 Erich3 (ENSMUSG00000078161) #9 Tnni3k (ENSMUSG00000040086) #10 Fpgt (ENSMUSG00000053870) #11 Lrriq3 (ENSMUSG00000028182) #12 Negr1 (ENSMUSG00000040037) #13 Zranb2 (ENSMUSG00000028180) #14 Ptger3 (ENSMUSG00000040016) #15 Cth (ENSMUSG00000028179) #16 Ankrd13c (ENSMUSG00000039988) #17 Srsf11 (ENSMUSG00000055436) #18 Lrrc40 (ENSMUSG00000063052) #19 Lrrc7 (ENSMUSG00000028176) #20 Depdc1a (ENSMUSG00000028175) #21 Rpe65 (ENSMUSG00000028174) #22 Wls (ENSMUSG00000028173) #23 Mus_C ANCESTRAL SPECIES 6 ENSGT00940000153304.C #7 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 Steppe mouse MODERN SPECIES 2731 ENSMSIG00000031993 Depdc1a (ENSMSIG00000031994) #21 Rpe65 (ENSMSIG00000031995) #22 spretus MODERN SPECIES 12 Tyw3 (MGP_SPRETEiJ_G0026708) #7 Cryz (MGP_SPRETEiJ_G0026709) #8 Erich3 (MGP_SPRETEiJ_G0026710) #9 Tnni3k (MGP_SPRETEiJ_G0026711) #10 Fpgt (MGP_SPRETEiJ_G0026712) #11 Lrriq3 (MGP_SPRETEiJ_G0026713) #12 Negr1 (MGP_SPRETEiJ_G0026714) #13 Zranb2 (MGP_SPRETEiJ_G0026715) #14 Ptger3 (MGP_SPRETEiJ_G0026716) #15 Cth (MGP_SPRETEiJ_G0026717) #16 Ankrd13c (MGP_SPRETEiJ_G0026718) #17 Srsf11 (MGP_SPRETEiJ_G0026719) #18 Lrrc40 (MGP_SPRETEiJ_G0026720) #19 Lrrc7 (MGP_SPRETEiJ_G0026721) #20 Depdc1a (MGP_SPRETEiJ_G0026722) #21 MGP_SPRETEiJ_G0026723 #22 Wls (MGP_SPRETEiJ_G0026724) #23 Rat MODERN SPECIES 11 Lrrc53 (ENSRNOG00000068038) Fpgt (ENSRNOG00000009548) #11 Lrriq3 (ENSRNOG00000009555) #12 Negr1 (ENSRNOG00000021410) #13 Zranb2 (ENSRNOG00000009990) #14 Ptger3 (ENSRNOG00000010325) #15 ENSRNOG00000063023 AABR07048397.1 (ENSRNOG00000038905) AABR07013931.2 (ENSRNOG00000053997) Cth (ENSRNOG00000010658) #16 Ankrd13c (ENSRNOG00000011340) #17 Srsf11 (ENSRNOG00000029592) #18 Lrrc40 (ENSRNOG00000011555) #19 Lrrc7 (ENSRNOG00000011980) #20 Depdc1 (ENSRNOG00000009503) #21 Rpe65 (ENSRNOG00000009582) #22 Wls (ENSRNOG00000036816) #23 Cricetidae ANCESTRAL SPECIES 6 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00940000161095 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Cricetinae ANCESTRAL SPECIES 12 ENSGT00940000153304.C #7 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Golden Hamster MODERN SPECIES 858 Depdc1a (ENSMAUG00000008368) #21 Rpe65 (ENSMAUG00000009524) #22 Wls (ENSMAUG00000011802) #23 Chinese hamster chok1gshd MODERN SPECIES 219 ENSCGRG00001021548 #9 Tnni3k (ENSCGRG00001019929) #10 Fpgt (ENSCGRG00001018999) #11 ENSCGRG00001018112 #12 ENSCGRG00001009246 Negr1 (ENSCGRG00001006889) #13 ENSCGRG00001019737 #14 Ptger3 (ENSCGRG00001018046) #15 Cth (ENSCGRG00001017639) #16 Ankrd13c (ENSCGRG00001014243) #17 Srsf11 (ENSCGRG00001012043) #18 Lrrc40 (ENSCGRG00001008246) #19 Lrrc7 (ENSCGRG00001014135) #20 ENSCGRG00001016303 Depdc1a (ENSCGRG00001021261) #21 Rpe65 (ENSCGRG00001003298) #22 Wls (ENSCGRG00001000949) #23 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00940000154882 #8 ENSGT00530000064485 #9 ENSGT00940000159131 #10 ENSGT00940000161095 ENSGT00780000122095 #11 ENSGT00390000004404 #12 ENSGT00940000159289 #13 ENSGT00730000111078 #14 ENSGT01030000234559.b #15 ENSGT00390000000312 #16 ENSGT00950000182928.B.d.b #17 ENSGT00730000110872.b #18 ENSGT00940000156968 #19 ENSGT00940000156262 #20 ENSGT00950000182976.b.a #21 ENSGT00950000182913.B #22 ENSGT00390000005897 #23 Northern American deer mouse MODERN SPECIES 23 Depdc1a (ENSPEMG00000014449) #21 ENSPEMG00000026035 Rpe65 (ENSPEMG00000019476) #22 Wls (ENSPEMG00000010125) #23 Prairie vole MODERN SPECIES 8 Tnni3k (ENSMOCG00000022213) #10 Fpgt (ENSMOCG00000017616) #11 ENSMOCG00000013522 #12 Negr1 (ENSMOCG00000016825) #13 Zranb2 (ENSMOCG00000018818) #14 Ptger3 (ENSMOCG00000008513) #15 ENSMOCG00000006415 ENSMOCG00000021537 Cth (ENSMOCG00000016949) #16 ENSMOCG00000002252 Ankrd13c (ENSMOCG00000022501) #17 Srsf11 (ENSMOCG00000011388) #18 Lrrc40 (ENSMOCG00000021998) #19 Lrrc7 (ENSMOCG00000017587) #20 Depdc1a (ENSMOCG00000021306) #21 Rpe65 (ENSMOCG00000004259) #22 Wls (ENSMOCG00000008906) #23 ENSMOCG00000009024 ENSMOCG00000014236 Prkacb (ENSMOCG00000001336) Samd13 (ENSMOCG00000010216) Uox (ENSMOCG00000016256) Dnase2b (ENSMOCG00000000354) Rpf1 (ENSMOCG00000018274) ENSMOCG00000005222 ENSMOCG00000000334 ENSMOCG00000022893 Ctbs (ENSMOCG00000020087) Ssx2ip (ENSMOCG00000014448) Lpar3 (ENSMOCG00000012201) Mcoln2 (ENSMOCG00000005258) Upper Galilee mountains blind mole rat MODERN SPECIES 1442 ENSNGAG00000018457 Depdc1a (ENSNGAG00000015975) #21 Rpe65 (ENSNGAG00000013981) #22 Wls (ENSNGAG00000013053) #23 Lesser Egyptian jerboa MODERN SPECIES 205 Negr1 (ENSJJAG00000023353) #13 ENSJJAG00000023535 ENSJJAG00000023929 #14 Ptger3 (ENSJJAG00000024154) #15 ENSJJAG00000012748 #16 ENSJJAG00000016527 #16 Ankrd13c (ENSJJAG00000016909) #17 Srsf11 (ENSJJAG00000017238) #18 Lrrc40 (ENSJJAG00000018176) #19 ENSJJAG00000018985 ENSJJAG00000020945 #20 ENSJJAG00000012643 ENSJJAG00000022639 Depdc1a (ENSJJAG00000000124) #21 Rpe65 (ENSJJAG00000006687) #22 ENSJJAG00000010529 ENSJJAG00000012707 Wls (ENSJJAG00000010758) #23 Kangaroo rat MODERN SPECIES 370 ENSDORG00000027114 ENSDORG00000024342 Negr1 (ENSDORG00000007902) #13 Zranb2 (ENSDORG00000016348) #14 Ptger3 (ENSDORG00000016347) #15 Cth (ENSDORG00000009184) #16 Ankrd13c (ENSDORG00000000672) #17 Srsf11 (ENSDORG00000000669) #18 Lrrc40 (ENSDORG00000000667) #19 Lrrc7 (ENSDORG00000000664) #20 Rpe65 (ENSDORG00000004476) #22 Wls (ENSDORG00000007449) #23 Gng12 (ENSDORG00000027722) Gadd45a (ENSDORG00000011668) ENSDORG00000023240 Serbp1 (ENSDORG00000002189) Slc35d1 (ENSDORG00000002120) Mier1 (ENSDORG00000002114) Sgip1 (ENSDORG00000001885) Pde4b (ENSDORG00000010712) Leprot (ENSDORG00000005691) Dnajc6 (ENSDORG00000005685) Ak4 (ENSDORG00000023966) Jak1 (ENSDORG00000013462) Raver2 (ENSDORG00000002498) Cachd1 (ENSDORG00000011104)