Theria ANCESTRAL SPECIES 22 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 Eutheria ANCESTRAL SPECIES 8 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT00950000184921 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 Glires ANCESTRAL SPECIES 15 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 Lagomorpha ANCESTRAL SPECIES 7 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00940000170308 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000163765 Pika MODERN SPECIES 3074 CSNK1G1 (ENSOPRG00000015279) #21 PPIB (ENSOPRG00000015271) #22 SNX22 (ENSOPRG00000015260) #23 SNX1 (ENSOPRG00000015240) #24 CIAO2A (ENSOPRG00000015229) #25 Rabbit MODERN SPECIES 8 SLC51B (ENSOCUG00000010723) MTFMT (ENSOCUG00000016147) ENSOCUG00000016136 ANKDD1A (ENSOCUG00000005353) ENSOCUG00000031622 PLEKHO2 (ENSOCUG00000022486) PIF1 (ENSOCUG00000005347) RBPMS2 (ENSOCUG00000010388) OAZ2 (ENSOCUG00000017341) ZNF609 (ENSOCUG00000002325) TRIP4 (ENSOCUG00000002322) ENSOCUG00000032107 ENSOCUG00000022442 CSNK1G1 (ENSOCUG00000012015) #21 ENSOCUG00000014619 PPIB (ENSOCUG00000012012) #22 SNX1 (ENSOCUG00000005449) #24 SNX22 (ENSOCUG00000021757) #23 CIAO2A (ENSOCUG00000009575) #25 DAPK2 (ENSOCUG00000000435) HERC1 (ENSOCUG00000014796) FBXL22 (ENSOCUG00000014791) USP3 (ENSOCUG00000014775) CA12 (ENSOCUG00000004632) APH1B (ENSOCUG00000004627) ENSOCUG00000035129 RAB8B (ENSOCUG00000010005) ENSOCUG00000038276 LACTB (ENSOCUG00000009995) ENSOCUG00000030711 TPM1 (ENSOCUG00000014122) Rodentia ANCESTRAL SPECIES 3 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Rodentia_B ANCESTRAL SPECIES 11 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 Myomorpha ANCESTRAL SPECIES 25 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 Muroidea ANCESTRAL SPECIES 23 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206.o Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206.o Cricetinae ANCESTRAL SPECIES 6 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206.o Golden Hamster MODERN SPECIES 672 Clpx (ENSMAUG00000018798) Pdcd7 (ENSMAUG00000010175) Ubap1l (ENSMAUG00000019477) Kbtbd13 (ENSMAUG00000007549) Rasl12 (ENSMAUG00000021367) Slc51b (ENSMAUG00000016209) Mtfmt (ENSMAUG00000019476) Spg21 (ENSMAUG00000011488) Ankdd1a (ENSMAUG00000009278) Plekho2 (ENSMAUG00000018647) Pif1 (ENSMAUG00000014194) Rbpms2 (ENSMAUG00000019407) Oaz2 (ENSMAUG00000013089) Zfp609 (ENSMAUG00000014361) Csnk1g1 (ENSMAUG00000020738) #21 Ppib (ENSMAUG00000016277) #22 Snx22 (ENSMAUG00000009971) #23 Snx1 (ENSMAUG00000017060) #24 ENSMAUG00000021107 #25 ENSMAUG00000009344 Dapk2 (ENSMAUG00000018956) Herc1 (ENSMAUG00000020600) Fbxl22 (ENSMAUG00000000756) Usp3 (ENSMAUG00000014840) Car12 (ENSMAUG00000010842) ENSMAUG00000020850 Rab8b (ENSMAUG00000014611) Rps27l (ENSMAUG00000014151) Lactb (ENSMAUG00000000691) Tpm1 (ENSMAUG00000015731) Tln2 (ENSMAUG00000011104) Chinese hamster chok1gshd MODERN SPECIES 284 Ubap1l (ENSCGRG00001023243) Kbtbd13 (ENSCGRG00001012125) Rasl12 (ENSCGRG00001015470) Slc51b (ENSCGRG00001013856) Mtfmt (ENSCGRG00001010938) Spg21 (ENSCGRG00001022317) Ankdd1a (ENSCGRG00001014311) Plekho2 (ENSCGRG00001003734) Pif1 (ENSCGRG00001022422) Rbpms2 (ENSCGRG00001014627) Oaz2 (ENSCGRG00001010487) Zfp609 (ENSCGRG00001021193) Trip4 (ENSCGRG00001021158) Pclaf (ENSCGRG00001015611) ENSCGRG00001006652 #21 Ppib (ENSCGRG00001018105) #22 Snx22 (ENSCGRG00001015603) #23 Snx1 (ENSCGRG00001019877) #24 ENSCGRG00001015874 #25 Dapk2 (ENSCGRG00001014149) Herc1 (ENSCGRG00001025001) Fbxl22 (ENSCGRG00001012979) Usp3 (ENSCGRG00001012692) Car12 (ENSCGRG00001005768) ENSCGRG00001019290 ENSCGRG00001018389 Rab8b (ENSCGRG00001023679) Rps27l (ENSCGRG00001020737) Lactb (ENSCGRG00001017416) Tpm1 (ENSCGRG00001021042) Tln2 (ENSCGRG00001010300) Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206.o Northern American deer mouse MODERN SPECIES 20 Kbtbd13 (ENSPEMG00000005949) Rasl12 (ENSPEMG00000026265) Slc51b (ENSPEMG00000030201) Mtfmt (ENSPEMG00000021536) Spg21 (ENSPEMG00000021006) Ankdd1a (ENSPEMG00000020958) Plekho2 (ENSPEMG00000020353) Pif1 (ENSPEMG00000022817) Rbpms2 (ENSPEMG00000030862) Oaz2 (ENSPEMG00000022920) Zfp609 (ENSPEMG00000020682) Trip4 (ENSPEMG00000012446) ENSPEMG00000008026 ENSPEMG00000027501 Csnk1g1 (ENSPEMG00000021693) #21 Ppib (ENSPEMG00000020752) #22 Snx22 (ENSPEMG00000020391) #23 Snx1 (ENSPEMG00000021765) #24 Ciao2a (ENSPEMG00000026146) #25 Dapk2 (ENSPEMG00000020347) Herc1 (ENSPEMG00000022291) Fbxl22 (ENSPEMG00000026865) Usp3 (ENSPEMG00000022492) Car12 (ENSPEMG00000020817) ENSPEMG00000017166 ENSPEMG00000020385 Rab8b (ENSPEMG00000022284) ENSPEMG00000022063 Lactb (ENSPEMG00000021795) Gm6525 (ENSPEMG00000024538) Tpm1 (ENSPEMG00000020869) Prairie vole MODERN SPECIES 13 Rasl12 (ENSMOCG00000022051) Slc51b (ENSMOCG00000016544) Mtfmt (ENSMOCG00000022110) Spg21 (ENSMOCG00000018012) ENSMOCG00000008827 Ankdd1a (ENSMOCG00000010903) Plekho2 (ENSMOCG00000004192) Pif1 (ENSMOCG00000002650) Rbpms2 (ENSMOCG00000021603) Oaz2 (ENSMOCG00000022084) Zfp609 (ENSMOCG00000018401) Trip4 (ENSMOCG00000012669) ENSMOCG00000007532 ENSMOCG00000002331 Csnk1g1 (ENSMOCG00000002807) #21 Ppib (ENSMOCG00000010333) #22 Snx22 (ENSMOCG00000021921) #23 Snx1 (ENSMOCG00000001495) #24 Ciao2a (ENSMOCG00000018290) #25 Dapk2 (ENSMOCG00000014779) Herc1 (ENSMOCG00000019096) Fbxl22 (ENSMOCG00000015109) Usp3 (ENSMOCG00000016014) Car12 (ENSMOCG00000011104) ENSMOCG00000006287 ENSMOCG00000012775 ENSMOCG00000002090 Rps27l (ENSMOCG00000000754) Lactb (ENSMOCG00000022545) Tpm1 (ENSMOCG00000021399) ENSMOCG00000001381 Murinae ANCESTRAL SPECIES 3 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Mus ANCESTRAL SPECIES 4 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a ENSGT00390000002049.c.b.u.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Mus_A ANCESTRAL SPECIES 4 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a ENSGT00390000002049.c.b.u.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Mus_B ANCESTRAL SPECIES 3 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828.s ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252.m ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a ENSGT00390000002049.c.b.u.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Mouse MODERN SPECIES 18 Ubap1l (ENSMUSG00000086228) Kbtbd13 (ENSMUSG00000054978) Rasl12 (ENSMUSG00000041696) Slc51b (ENSMUSG00000053862) Mtfmt (ENSMUSG00000059183) Spg21 (ENSMUSG00000032388) Ankdd1a (ENSMUSG00000066510) Plekho2 (ENSMUSG00000050721) Pif1 (ENSMUSG00000041064) Rbpms2 (ENSMUSG00000032387) Oaz2 (ENSMUSG00000040652) Zfp609 (ENSMUSG00000040524) Trip4 (ENSMUSG00000032386) Pclaf (ENSMUSG00000040204) Csnk1g1 (ENSMUSG00000032384) #21 Ppib (ENSMUSG00000032383) #22 Snx22 (ENSMUSG00000039452) #23 Snx1 (ENSMUSG00000032382) #24 Ciao2a (ENSMUSG00000032381) #25 Dapk2 (ENSMUSG00000032380) Herc1 (ENSMUSG00000038664) Fbxl22 (ENSMUSG00000050503) Usp3 (ENSMUSG00000032376) Car12 (ENSMUSG00000032373) Aph1b (ENSMUSG00000032375) Aph1c (ENSMUSG00000053040) Rab8b (ENSMUSG00000036943) Rps27l (ENSMUSG00000036781) Lactb (ENSMUSG00000032370) Tpm1 (ENSMUSG00000032366) Tln2 (ENSMUSG00000052698) Mus_C ANCESTRAL SPECIES 8 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828.s ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252.m ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a ENSGT00390000002049.c.b.u.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 spretus MODERN SPECIES 18 Ubap1l (MGP_SPRETEiJ_G0033497) Kbtbd13 (MGP_SPRETEiJ_G0033498) Rasl12 (MGP_SPRETEiJ_G0033499) Slc51b (MGP_SPRETEiJ_G0033500) Mtfmt (MGP_SPRETEiJ_G0033501) Spg21 (MGP_SPRETEiJ_G0033502) Ankdd1a (MGP_SPRETEiJ_G0033503) Plekho2 (MGP_SPRETEiJ_G0033504) Pif1 (MGP_SPRETEiJ_G0033505) Rbpms2 (MGP_SPRETEiJ_G0033506) MGP_SPRETEiJ_G0033507 Zfp609 (MGP_SPRETEiJ_G0033508) Trip4 (MGP_SPRETEiJ_G0033509) Pclaf (MGP_SPRETEiJ_G0033510) Csnk1g1 (MGP_SPRETEiJ_G0033511) #21 Ppib (MGP_SPRETEiJ_G0033512) #22 Snx22 (MGP_SPRETEiJ_G0033513) #23 Snx1 (MGP_SPRETEiJ_G0033514) #24 Ciao2a (MGP_SPRETEiJ_G0033515) #25 MGP_SPRETEiJ_G0033516 Herc1 (MGP_SPRETEiJ_G0033517) Fbxl22 (MGP_SPRETEiJ_G0033518) Usp3 (MGP_SPRETEiJ_G0033519) Car12 (MGP_SPRETEiJ_G0033520) Aph1b (MGP_SPRETEiJ_G0033521) Aph1c (MGP_SPRETEiJ_G0033522) Rab8b (MGP_SPRETEiJ_G0033523) Rps27l (MGP_SPRETEiJ_G0033524) Lactb (MGP_SPRETEiJ_G0033525) Tpm1 (MGP_SPRETEiJ_G0033526) Tln2 (MGP_SPRETEiJ_G0033527) Steppe mouse MODERN SPECIES 3365 ENSMSIG00000005605 Kbtbd13 (ENSMSIG00000005647) Rasl12 (ENSMSIG00000005656) Slc51b (ENSMSIG00000005686) Mtfmt (ENSMSIG00000005704) Spg21 (ENSMSIG00000005730) Ankdd1a (ENSMSIG00000005779) Plekho2 (ENSMSIG00000005874) Pif1 (ENSMSIG00000005899) ENSMSIG00000005998 Oaz2 (ENSMSIG00000006069) Zfp609 (ENSMSIG00000006120) Trip4 (ENSMSIG00000006163) ENSMSIG00000006456 Csnk1g1 (ENSMSIG00000006521) #21 Ppib (ENSMSIG00000007090) #22 Snx22 (ENSMSIG00000007110) #23 Snx1 (ENSMSIG00000007126) #24 Ciao2a (ENSMSIG00000007225) #25 Ryukyu mouse MODERN SPECIES 18 Ubap1l (MGP_CAROLIEiJ_G0032358) Kbtbd13 (MGP_CAROLIEiJ_G0032359) Rasl12 (MGP_CAROLIEiJ_G0032360) Slc51b (MGP_CAROLIEiJ_G0032361) Mtfmt (MGP_CAROLIEiJ_G0032362) Spg21 (MGP_CAROLIEiJ_G0032363) Ankdd1a (MGP_CAROLIEiJ_G0032364) Plekho2 (MGP_CAROLIEiJ_G0032365) Pif1 (MGP_CAROLIEiJ_G0032366) Rbpms2 (MGP_CAROLIEiJ_G0032367) MGP_CAROLIEiJ_G0032368 Zfp609 (MGP_CAROLIEiJ_G0032369) Trip4 (MGP_CAROLIEiJ_G0032370) Pclaf (MGP_CAROLIEiJ_G0032371) Csnk1g1 (MGP_CAROLIEiJ_G0032372) #21 Ppib (MGP_CAROLIEiJ_G0032373) #22 Snx22 (MGP_CAROLIEiJ_G0032374) #23 Snx1 (MGP_CAROLIEiJ_G0032375) #24 Ciao2a (MGP_CAROLIEiJ_G0032376) #25 MGP_CAROLIEiJ_G0032377 Herc1 (MGP_CAROLIEiJ_G0032378) Fbxl22 (MGP_CAROLIEiJ_G0032379) Usp3 (MGP_CAROLIEiJ_G0032380) Car12 (MGP_CAROLIEiJ_G0032381) Aph1b (MGP_CAROLIEiJ_G0032382) MGP_CAROLIEiJ_G0032383 MGP_CAROLIEiJ_G0032384 Rab8b (MGP_CAROLIEiJ_G0032385) Lactb (MGP_CAROLIEiJ_G0032387) Tpm1 (MGP_CAROLIEiJ_G0032388) Tln2 (MGP_CAROLIEiJ_G0032389) Shrew mouse MODERN SPECIES 1 Pdcd7 (MGP_PahariEiJ_G0015222) Ubap1l (MGP_PahariEiJ_G0015223) Kbtbd13 (MGP_PahariEiJ_G0015224) Rasl12 (MGP_PahariEiJ_G0015225) Slc51b (MGP_PahariEiJ_G0015226) Mtfmt (MGP_PahariEiJ_G0015227) Spg21 (MGP_PahariEiJ_G0015228) Ankdd1a (MGP_PahariEiJ_G0015229) Plekho2 (MGP_PahariEiJ_G0015230) Pif1 (MGP_PahariEiJ_G0015231) Rbpms2 (MGP_PahariEiJ_G0015232) MGP_PahariEiJ_G0015233 Zfp609 (MGP_PahariEiJ_G0015234) Trip4 (MGP_PahariEiJ_G0015235) Csnk1g1 (MGP_PahariEiJ_G0015237) #21 Ppib (MGP_PahariEiJ_G0015238) #22 Snx22 (MGP_PahariEiJ_G0015239) #23 Snx1 (MGP_PahariEiJ_G0015240) #24 Ciao2a (MGP_PahariEiJ_G0015241) #25 MGP_PahariEiJ_G0015242 Herc1 (MGP_PahariEiJ_G0015243) Fbxl22 (MGP_PahariEiJ_G0015244) Usp3 (MGP_PahariEiJ_G0015245) Car12 (MGP_PahariEiJ_G0015246) Aph1b (MGP_PahariEiJ_G0015247) MGP_PahariEiJ_G0015248 Rab8b (MGP_PahariEiJ_G0015249) MGP_PahariEiJ_G0015250 Lactb (MGP_PahariEiJ_G0015251) MGP_PahariEiJ_G0015252 Tln2 (MGP_PahariEiJ_G0015253) Rat MODERN SPECIES 18 Ubap1l (ENSRNOG00000050979) AABR07070456.1 (ENSRNOG00000014383) Rasl12 (ENSRNOG00000032339) Slc51b (ENSRNOG00000028889) Mtfmt (ENSRNOG00000014602) Spg21 (ENSRNOG00000015019) Ankdd1a (ENSRNOG00000015554) Plekho2 (ENSRNOG00000029242) Pif1 (ENSRNOG00000015878) Rbpms2 (ENSRNOG00000015896) Oaz2 (ENSRNOG00000015953) Zfp609 (ENSRNOG00000015977) Trip4 (ENSRNOG00000016121) Pclaf (ENSRNOG00000067723) Csnk1g1 (ENSRNOG00000016620) #21 Ppib (ENSRNOG00000016781) #22 Snx22 (ENSRNOG00000022852) #23 Snx1 (ENSRNOG00000017029) #24 Ciao2a (ENSRNOG00000017119) #25 Dapk2 (ENSRNOG00000017332) Herc1 (ENSRNOG00000051671) Fbxl22 (ENSRNOG00000017684) Usp3 (ENSRNOG00000017714) Car12 (ENSRNOG00000017766) LOC691658 (ENSRNOG00000063302) LOC120094192 (ENSRNOG00000067077) Aph1b (ENSRNOG00000027295) Rab8b (ENSRNOG00000018009) Rps27l (ENSRNOG00000050473) Lactb (ENSRNOG00000018081) Tpm1 (ENSRNOG00000018184) Upper Galilee mountains blind mole rat MODERN SPECIES 955 ENSNGAG00000011880 Rasl12 (ENSNGAG00000019976) Slc51b (ENSNGAG00000016122) Mtfmt (ENSNGAG00000023307) ENSNGAG00000021527 Ankdd1a (ENSNGAG00000009321) ENSNGAG00000003639 Plekho2 (ENSNGAG00000021787) Pif1 (ENSNGAG00000021720) Rbpms2 (ENSNGAG00000023569) ENSNGAG00000015132 Zfp609 (ENSNGAG00000013924) Trip4 (ENSNGAG00000019566) Pclaf (ENSNGAG00000014228) Csnk1g1 (ENSNGAG00000020698) #21 Ppib (ENSNGAG00000010794) #22 Snx22 (ENSNGAG00000009778) #23 Snx1 (ENSNGAG00000008529) #24 Ciao2a (ENSNGAG00000011845) #25 ENSNGAG00000011632 Hecw1 (ENSNGAG00000002566) Mrpl32 (ENSNGAG00000014806) Psma2 (ENSNGAG00000014399) ENSNGAG00000005007 ENSNGAG00000017257 Inhba (ENSNGAG00000016837) Sugct (ENSNGAG00000004026) ENSNGAG00000024052 Cdk13 (ENSNGAG00000021278) Rala (ENSNGAG00000020171) Lesser Egyptian jerboa MODERN SPECIES 92 ENSJJAG00000011177 Rasl12 (ENSJJAG00000019387) Slc51b (ENSJJAG00000017452) Mtfmt (ENSJJAG00000021378) ENSJJAG00000013627 Ankdd1a (ENSJJAG00000014309) Plekho2 (ENSJJAG00000014316) Pif1 (ENSJJAG00000017111) Rbpms2 (ENSJJAG00000001664) Oaz2 (ENSJJAG00000024365) Zfp609 (ENSJJAG00000019246) Trip4 (ENSJJAG00000001629) Pclaf (ENSJJAG00000008107) ENSJJAG00000017750 Csnk1g1 (ENSJJAG00000012391) #21 Ppib (ENSJJAG00000022318) #22 Snx22 (ENSJJAG00000013816) #23 Snx1 (ENSJJAG00000004729) #24 ENSJJAG00000014166 #25 Dapk2 (ENSJJAG00000017017) Herc1 (ENSJJAG00000011445) Fbxl22 (ENSJJAG00000005076) Usp3 (ENSJJAG00000023661) Car12 (ENSJJAG00000013683) ENSJJAG00000018987 Rab8b (ENSJJAG00000016477) ENSJJAG00000021616 Lactb (ENSJJAG00000009980) Tpm1 (ENSJJAG00000022370) Tln2 (ENSJJAG00000016766) Vps13c (ENSJJAG00000012718) Kangaroo rat MODERN SPECIES 330 Ubap1l (ENSDORG00000024217) Kbtbd13 (ENSDORG00000024320) Rasl12 (ENSDORG00000000119) Slc51b (ENSDORG00000023591) Mtfmt (ENSDORG00000004684) Spg21 (ENSDORG00000003605) Ankdd1a (ENSDORG00000008259) Plekho2 (ENSDORG00000010180) Pif1 (ENSDORG00000010176) ENSDORG00000004025 Oaz2 (ENSDORG00000013528) Zfp609 (ENSDORG00000013522) Trip4 (ENSDORG00000014914) Pclaf (ENSDORG00000014912) Csnk1g1 (ENSDORG00000011978) #21 Ppib (ENSDORG00000003536) #22 Snx22 (ENSDORG00000003534) #23 Snx1 (ENSDORG00000003256) #24 Ciao2a (ENSDORG00000026286) #25 ENSDORG00000012436 Herc1 (ENSDORG00000016189) Fbxl22 (ENSDORG00000027356) Usp3 (ENSDORG00000016188) Car12 (ENSDORG00000012363) ENSDORG00000012361 Rab8b (ENSDORG00000023189) ENSDORG00000007575 Lactb (ENSDORG00000028713) Tpm1 (ENSDORG00000002438) Tln2 (ENSDORG00000001561) Vps13c (ENSDORG00000005969) Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 Sciuridae ANCESTRAL SPECIES 11 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Eurasian red squirrel MODERN SPECIES 11 KBTBD13 (ENSSVLG00005022826) RASL12 (ENSSVLG00005022769) SLC51B (ENSSVLG00005022725) MTFMT (ENSSVLG00005022671) SPG21 (ENSSVLG00005022592) ANKDD1A (ENSSVLG00005022263) PLEKHO2 (ENSSVLG00005022144) PIF1 (ENSSVLG00005022000) RBPMS2 (ENSSVLG00005021946) OAZ2 (ENSSVLG00005021896) ENSSVLG00005021862 ZNF609 (ENSSVLG00005021804) TRIP4 (ENSSVLG00005021760) PCLAF (ENSSVLG00005021677) ENSSVLG00005020987 #21 PPIB (ENSSVLG00005020844) #22 SNX22 (ENSSVLG00005020773) #23 SNX1 (ENSSVLG00005020669) #24 CIAO2A (ENSSVLG00005020595) #25 DAPK2 (ENSSVLG00005020537) HERC1 (ENSSVLG00005019826) FBXL22 (ENSSVLG00005019656) USP3 (ENSSVLG00005019582) CA12 (ENSSVLG00005019375) APH1B (ENSSVLG00005019139) RAB8B (ENSSVLG00005019069) ENSSVLG00005018915 LACTB (ENSSVLG00005018852) TPM1 (ENSSVLG00005018158) TLN2 (ENSSVLG00005017833) ENSSVLG00005017744 Marmotini ANCESTRAL SPECIES 9 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857.w ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086.j ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252.o ENSGT00960000190216 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Alpin marmot MODERN SPECIES 7 RASL12 (ENSMMMG00000007263) ENSMMMG00000007278 ENSMMMG00000007284 SPG21 (ENSMMMG00000007291) ANKDD1A (ENSMMMG00000007304) PLEKHO2 (ENSMMMG00000007337) PIF1 (ENSMMMG00000007343) ENSMMMG00000007389 OAZ2 (ENSMMMG00000007403) ENSMMMG00000007419 ZNF609 (ENSMMMG00000007450) TRIP4 (ENSMMMG00000007457) ENSMMMG00000007518 ENSMMMG00000007521 CSNK1G1 (ENSMMMG00000007575) #21 PPIB (ENSMMMG00000008986) #22 SNX22 (ENSMMMG00000008995) #23 SNX1 (ENSMMMG00000009009) #24 CIAO2A (ENSMMMG00000009021) #25 DAPK2 (ENSMMMG00000009028) HERC1 (ENSMMMG00000009068) ENSMMMG00000009185 ENSMMMG00000009191 USP3 (ENSMMMG00000009199) CA12 (ENSMMMG00000009446) APH1B (ENSMMMG00000009477) RAB8B (ENSMMMG00000009506) RPS27L (ENSMMMG00000009532) TPM1 (ENSMMMG00000009577) TLN2 (ENSMMMG00000010746) ENSMMMG00000011016 Marmotini_b ANCESTRAL SPECIES 4 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857.w ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086.j ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252.o ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000163765.h Squirrel MODERN SPECIES 71 UBAP1L (ENSSTOG00000019679) KBTBD13 (ENSSTOG00000010131) RASL12 (ENSSTOG00000024973) SLC51B (ENSSTOG00000010125) MTFMT (ENSSTOG00000020944) ENSSTOG00000010101 ANKDD1A (ENSSTOG00000010088) PLEKHO2 (ENSSTOG00000020393) PIF1 (ENSSTOG00000020621) RBPMS2 (ENSSTOG00000010055) OAZ2 (ENSSTOG00000026782) ZNF609 (ENSSTOG00000028919) TRIP4 (ENSSTOG00000014228) ENSSTOG00000019643 CSNK1G1 (ENSSTOG00000007485) #21 PPIB (ENSSTOG00000005354) #22 SNX22 (ENSSTOG00000026558) #23 SNX1 (ENSSTOG00000005324) #24 CIAO2A (ENSSTOG00000024438) #25 DAPK2 (ENSSTOG00000016080) HERC1 (ENSSTOG00000016063) FBXL22 (ENSSTOG00000016061) USP3 (ENSSTOG00000016055) CA12 (ENSSTOG00000016051) APH1B (ENSSTOG00000016049) RAB8B (ENSSTOG00000016046) RPS27L (ENSSTOG00000014532) LACTB (ENSSTOG00000009971) TPM1 (ENSSTOG00000009955) TLN2 (ENSSTOG00000014824) ENSSTOG00000003290 Arctic ground squirrel MODERN SPECIES 33 RASL12 (ENSUPAG00010000634) SLC51B (ENSUPAG00010000624) MTFMT (ENSUPAG00010000615) SPG21 (ENSUPAG00010000593) ANKDD1A (ENSUPAG00010000557) ENSUPAG00010000549 PLEKHO2 (ENSUPAG00010000532) PIF1 (ENSUPAG00010000479) ENSUPAG00010000455 OAZ2 (ENSUPAG00010000430) ZNF609 (ENSUPAG00010000413) TRIP4 (ENSUPAG00010000337) ENSUPAG00010000325 PCLAF (ENSUPAG00010000314) CSNK1G1 (ENSUPAG00010000036) #21 PPIB (ENSUPAG00010020340) #22 SNX22 (ENSUPAG00010020334) #23 SNX1 (ENSUPAG00010020313) #24 CIAO2A (ENSUPAG00010020303) #25 DAPK2 (ENSUPAG00010020287) HERC1 (ENSUPAG00010020206) FBXL22 (ENSUPAG00010020202) USP3 (ENSUPAG00010020157) CA12 (ENSUPAG00010020142) APH1B (ENSUPAG00010020133) RAB8B (ENSUPAG00010020124) RPS27L (ENSUPAG00010020117) LACTB (ENSUPAG00010020113) TPM1 (ENSUPAG00010020041) TLN2 (ENSUPAG00010019892) ENSUPAG00010019882 Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000157312.g ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000157312.g ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000163765 Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000157312.g ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00950000183083.a.d.a Degu MODERN SPECIES 67 SLC51B (ENSODEG00000016552) ENSODEG00000017695 SPG21 (ENSODEG00000016267) EFCC1 (ENSODEG00000016555) ACAD9 (ENSODEG00000016388) ANKDD1A (ENSODEG00000016476) PLEKHO2 (ENSODEG00000016749) PIF1 (ENSODEG00000016408) RBPMS2 (ENSODEG00000016172) Oaz2 (ENSODEG00000016846) ZNF609 (ENSODEG00000016415) TRIP4 (ENSODEG00000016494) ENSODEG00000016410 PCLAF (ENSODEG00000016992) CSNK1G1 (ENSODEG00000016448) #21 PPIB (ENSODEG00000016713) #22 SNX22 (ENSODEG00000016526) #23 SNX1 (ENSODEG00000016535) #24 CIAO2A (ENSODEG00000017473) #25 DAPK2 (ENSODEG00000016756) HERC1 (ENSODEG00000016719) FBXL22 (ENSODEG00000016765) USP3 (ENSODEG00000017024) CA12 (ENSODEG00000016537) APH1B (ENSODEG00000016784) RAB8B (ENSODEG00000016571) ENSODEG00000016936 LACTB (ENSODEG00000016877) TPM1 (ENSODEG00000017042) TLN2 (ENSODEG00000016531) ENSODEG00000016956 Long-tailed chinchilla MODERN SPECIES 157 MTFMT (ENSCLAG00000014170) SPG21 (ENSCLAG00000011678) GP9 (ENSCLAG00000012298) ENSCLAG00000010665 ENSCLAG00000012065 ANKDD1A (ENSCLAG00000007792) PLEKHO2 (ENSCLAG00000008540) PIF1 (ENSCLAG00000011808) RBPMS2 (ENSCLAG00000016082) OAZ2 (ENSCLAG00000014124) ZNF609 (ENSCLAG00000006038) TRIP4 (ENSCLAG00000006872) PCLAF (ENSCLAG00000006954) CSNK1G1 (ENSCLAG00000008023) #21 GNG5B (ENSCLAG00000017711) PPIB (ENSCLAG00000011151) #22 SNX22 (ENSCLAG00000008526) #23 SNX1 (ENSCLAG00000008927) #24 CIAO2A (ENSCLAG00000012173) #25 DAPK2 (ENSCLAG00000013163) HERC1 (ENSCLAG00000016354) FBXL22 (ENSCLAG00000014965) USP3 (ENSCLAG00000012461) CA12 (ENSCLAG00000009814) APH1B (ENSCLAG00000014885) RAB8B (ENSCLAG00000010690) RPS27L (ENSCLAG00000010811) LACTB (ENSCLAG00000007519) TPM1 (ENSCLAG00000008921) TLN2 (ENSCLAG00000009840) ENSCLAG00000016591 Guinea pig MODERN SPECIES ENSCPOG00000007628 RFTN1 (ENSCPOG00000007616) OXNAD1 (ENSCPOG00000026881) DPH3 (ENSCPOG00000003477) GALNT15 (ENSCPOG00000003476) ANKRD28 (ENSCPOG00000015199) BTD (ENSCPOG00000024569) PLEKHO2 (ENSCPOG00000030376) PIF1 (ENSCPOG00000008211) RBPMS2 (ENSCPOG00000007695) OAZ2 (ENSCPOG00000001960) ZNF609 (ENSCPOG00000001956) TRIP4 (ENSCPOG00000006483) PCLAF (ENSCPOG00000033197) CSNK1G1 (ENSCPOG00000000256) #21 PPIB (ENSCPOG00000034437) #22 SNX22 (ENSCPOG00000000254) #23 SNX1 (ENSCPOG00000000253) #24 CIAO2A (ENSCPOG00000033175) #25 DAPK2 (ENSCPOG00000000890) ENSCPOG00000030019 ENSCPOG00000007146 PTP4A1 (ENSCPOG00000032105) LGSN (ENSCPOG00000008736) KHDRBS2 (ENSCPOG00000025621) PRIM2 (ENSCPOG00000003912) ENSCPOG00000035048 RAB23 (ENSCPOG00000030218) BAG2 (ENSCPOG00000040302) ZNF451 (ENSCPOG00000002491) BEND6 (ENSCPOG00000015453) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 19 ENSHGLG00000048650 ENSHGLG00000013211 ENSHGLG00000045786 ENSHGLG00000032983 ENSHGLG00000013426 ENSHGLG00000018246 PLEKHO2 (ENSHGLG00000014806) PIF1 (ENSHGLG00000015390) RBPMS2 (ENSHGLG00000008504) Oaz2 (ENSHGLG00000034510) ENSHGLG00000045868 ZNF609 (ENSHGLG00000005885) TRIP4 (ENSHGLG00000009286) PCLAF (ENSHGLG00000042208) CSNK1G1 (ENSHGLG00000008107) #21 PPIB (ENSHGLG00000036036) #22 SNX22 (ENSHGLG00000016133) #23 SNX1 (ENSHGLG00000015096) #24 CIAO2A (ENSHGLG00000018054) #25 DAPK2 (ENSHGLG00000013578) HERC1 (ENSHGLG00000015429) ENSHGLG00000006447 USP3 (ENSHGLG00000008193) ENSHGLG00000049466 ENSHGLG00000044085 ENSHGLG00000014469 CA12 (ENSHGLG00000036575) APH1B (ENSHGLG00000031885) ENSHGLG00000042104 RAB8B (ENSHGLG00000049367) ENSHGLG00000008830 Naked mole-rat female MODERN SPECIES 6 CPNE1 (ENSHGLG00000013228) SPAG4 (ENSHGLG00000017758) ENSHGLG00000045390 ENSHGLG00000005886 ENSHGLG00000010420 ENSHGLG00000039585 GDF5 (ENSHGLG00000017753) ENSHGLG00000021218 UQCC1 (ENSHGLG00000017446) FAM83C (ENSHGLG00000040004) EIF6 (ENSHGLG00000010214) MMP24 (ENSHGLG00000046205) PROCR (ENSHGLG00000009583) ENSHGLG00000036931 EDEM2 (ENSHGLG00000039402) ENSHGLG00000011522 #22 TRPC4AP (ENSHGLG00000015614) GSS (ENSHGLG00000013619) ENSHGLG00000049123 ACSS2 (ENSHGLG00000013444) GGT7 (ENSHGLG00000007389) ENSHGLG00000005296 ENSHGLG00000020370 TP53INP2 (ENSHGLG00000033209) ENSHGLG00000008565 MAP1LC3A (ENSHGLG00000009257) ENSHGLG00000010397 ITCH (ENSHGLG00000005001) AHCY (ENSHGLG00000009751) ENSHGLG00000031940 RALY (ENSHGLG00000017779) Tree shrew MODERN SPECIES 3448 CSNK1G1 (ENSTBEG00000003013) #21 ENSTBEG00000002998 #22 SNX1 (ENSTBEG00000002877) #24 CIAO2A (ENSTBEG00000002837) #25 Primates ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT00950000184921 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Lemuriformes ANCESTRAL SPECIES 8 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Mouse lemur MODERN SPECIES 22 RASL12 (ENSMICG00000000624) SLC51B (ENSMICG00000046031) MTFMT (ENSMICG00000002867) SPG21 (ENSMICG00000002862) ANKDD1A (ENSMICG00000002854) PLEKHO2 (ENSMICG00000047618) PIF1 (ENSMICG00000007373) RBPMS2 (ENSMICG00000029953) ENSMICG00000007349 OAZ2 (ENSMICG00000007344) ZNF609 (ENSMICG00000031327) TRIP4 (ENSMICG00000008679) PCLAF (ENSMICG00000008673) CSNK1G1 (ENSMICG00000003315) #21 ENSMICG00000031175 PPIB (ENSMICG00000038643) #22 SNX22 (ENSMICG00000000405) #23 SNX1 (ENSMICG00000011078) #24 ENSMICG00000036936 #25 DAPK2 (ENSMICG00000011065) HERC1 (ENSMICG00000007158) FBXL22 (ENSMICG00000007146) ENSMICG00000034930 USP3 (ENSMICG00000007133) CA12 (ENSMICG00000007123) APH1B (ENSMICG00000007117) RAB8B (ENSMICG00000043942) ENSMICG00000007109 LACTB (ENSMICG00000007103) TPM1 (ENSMICG00000028096) TLN2 (ENSMICG00000002620) Lemuriformes_a ANCESTRAL SPECIES 1 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Greater bamboo lemur MODERN SPECIES 105 KBTBD13 (ENSPSMG00000000701) RASL12 (ENSPSMG00000000720) SLC51B (ENSPSMG00000000726) MTFMT (ENSPSMG00000000744) SPG21 (ENSPSMG00000000822) ANKDD1A (ENSPSMG00000000929) PLEKHO2 (ENSPSMG00000000943) PIF1 (ENSPSMG00000000997) ENSPSMG00000001007 OAZ2 (ENSPSMG00000001030) ENSPSMG00000001037 ZNF609 (ENSPSMG00000001049) TRIP4 (ENSPSMG00000001102) PCLAF (ENSPSMG00000001141) CSNK1G1 (ENSPSMG00000001719) #21 PPIB (ENSPSMG00000002859) #22 SNX22 (ENSPSMG00000002870) #23 SNX1 (ENSPSMG00000003000) #24 CIAO2A (ENSPSMG00000003334) #25 DAPK2 (ENSPSMG00000003359) HERC1 (ENSPSMG00000003501) FBXL22 (ENSPSMG00000003647) USP3 (ENSPSMG00000003840) CA12 (ENSPSMG00000004183) APH1B (ENSPSMG00000004224) RAB8B (ENSPSMG00000004246) ENSPSMG00000004263 LACTB (ENSPSMG00000004273) TPM1 (ENSPSMG00000005012) ENSPSMG00000005970 TLN2 (ENSPSMG00000006148) Coquerels sifaka MODERN SPECIES 321 PDCD7 (ENSPCOG00000020644) UBAP1L (ENSPCOG00000021980) RASL12 (ENSPCOG00000005311) SLC51B (ENSPCOG00000020658) ENSPCOG00000019663 SPG21 (ENSPCOG00000025563) ANKDD1A (ENSPCOG00000020935) PLEKHO2 (ENSPCOG00000015719) PIF1 (ENSPCOG00000018639) RBPMS2 (ENSPCOG00000023778) OAZ2 (ENSPCOG00000013439) ZNF609 (ENSPCOG00000013781) TRIP4 (ENSPCOG00000013484) ENSPCOG00000013171 CSNK1G1 (ENSPCOG00000024852) #21 PPIB (ENSPCOG00000024977) #22 Bushbaby MODERN SPECIES 126 PDCD7 (ENSOGAG00000028484) UBAP1L (ENSOGAG00000026705) KBTBD13 (ENSOGAG00000032677) RASL12 (ENSOGAG00000010391) SLC51B (ENSOGAG00000010390) MTFMT (ENSOGAG00000010388) SPG21 (ENSOGAG00000010385) PLEKHO2 (ENSOGAG00000010379) PIF1 (ENSOGAG00000010371) RBPMS2 (ENSOGAG00000026017) OAZ2 (ENSOGAG00000012443) ZNF609 (ENSOGAG00000012432) TRIP4 (ENSOGAG00000012427) PCLAF (ENSOGAG00000003982) CSNK1G1 (ENSOGAG00000016882) #21 PPIB (ENSOGAG00000001933) #22 SNX22 (ENSOGAG00000001931) #23 ENSOGAG00000001925 #24 ENSOGAG00000024544 CIAO2A (ENSOGAG00000001924) #25 DAPK2 (ENSOGAG00000027766) HERC1 (ENSOGAG00000013134) ENSOGAG00000025353 ENSOGAG00000032162 USP3 (ENSOGAG00000013129) ENSOGAG00000030840 CA12 (ENSOGAG00000002515) APH1B (ENSOGAG00000034676) RAB8B (ENSOGAG00000002514) ENSOGAG00000002513 LACTB (ENSOGAG00000026764) Haplorrhini ANCESTRAL SPECIES 17 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a Tarsier MODERN SPECIES 4897 TRIP4 (ENSTSYG00000007185) PCLAF (ENSTSYG00000009438) CSNK1G1 (ENSTSYG00000013750) #21 PPIB (ENSTSYG00000028947) #22 ENSTSYG00000026988 #23 SNX1 (ENSTSYG00000030172) #24 FAM96A (ENSTSYG00000034548) #25 DAPK2 (ENSTSYG00000012419) Simiiformes ANCESTRAL SPECIES 2 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a Platyrrhini ANCESTRAL SPECIES 27 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a Cebidae ANCESTRAL SPECIES 29 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Marmoset MODERN SPECIES 1 RASL12 (ENSCJAG00000080082) SLC51B (ENSCJAG00000006852) MTFMT (ENSCJAG00000006848) ENSCJAG00000005282 ANKDD1A (ENSCJAG00000031989) ENSCJAG00000075564 PLEKHO2 (ENSCJAG00000040691) PIF1 (ENSCJAG00000005214) RBPMS2 (ENSCJAG00000005200) OAZ2 (ENSCJAG00000005156) ENSCJAG00000086243 ZNF609 (ENSCJAG00000005128) TRIP4 (ENSCJAG00000005107) PCLAF (ENSCJAG00000037051) CSNK1G1 (ENSCJAG00000005023) #21 PPIB (ENSCJAG00000004981) #22 SNX22 (ENSCJAG00000005006) #23 SNX1 (ENSCJAG00000004856) #24 CIAO2A (ENSCJAG00000084496) #25 DAPK2 (ENSCJAG00000004806) ENSCJAG00000070880 HERC1 (ENSCJAG00000004567) ENSCJAG00000004563 USP3 (ENSCJAG00000004506) CA12 (ENSCJAG00000011284) APH1B (ENSCJAG00000011305) RAB8B (ENSCJAG00000042696) ENSCJAG00000044434 LACTB (ENSCJAG00000004470) TPM1 (ENSCJAG00000004355) TLN2 (ENSCJAG00000004289) Cebidae_a ANCESTRAL SPECIES 39 ENSGT00390000017392 ENSGT00390000008092.b ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00510000047616.b.j ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Bolivian squirrel monkey MODERN SPECIES 179 SLC51B (ENSSBOG00000023480) MTFMT (ENSSBOG00000024674) SPG21 (ENSSBOG00000021959) ANKDD1A (ENSSBOG00000006335) ENSSBOG00000023129 PLEKHO2 (ENSSBOG00000029901) PIF1 (ENSSBOG00000020526) RBPMS2 (ENSSBOG00000020118) ENSSBOG00000022217 ZNF609 (ENSSBOG00000032672) ENSSBOG00000034750 TRIP4 (ENSSBOG00000020516) ENSSBOG00000007219 CSNK1G1 (ENSSBOG00000026971) #21 ENSSBOG00000031609 PPIB (ENSSBOG00000034439) #22 SNX22 (ENSSBOG00000025574) #23 SNX1 (ENSSBOG00000000463) #24 ENSSBOG00000034764 CIAO2A (ENSSBOG00000020628) #25 DAPK2 (ENSSBOG00000018728) TTC8 (ENSSBOG00000021140) EML5 (ENSSBOG00000026643) ENSSBOG00000017936 PTPN21 (ENSSBOG00000023528) SPATA7 (ENSSBOG00000033474) ENSSBOG00000030432 ENSSBOG00000036347 KCNK10 (ENSSBOG00000021387) ENSSBOG00000023389 GALC (ENSSBOG00000026713) Capuchin MODERN SPECIES 386 ENSCCAG00000034785 ENSCCAG00000037021 SPG21 (ENSCCAG00000020796) ANKDD1A (ENSCCAG00000032885) PLEKHO2 (ENSCCAG00000024801) PIF1 (ENSCCAG00000033317) RBPMS2 (ENSCCAG00000036496) OAZ2 (ENSCCAG00000031358) ZNF609 (ENSCCAG00000023662) TRIP4 (ENSCCAG00000026483) PCLAF (ENSCCAG00000035573) CSNK1G1 (ENSCCAG00000028280) #21 PPIB (ENSCCAG00000037462) #22 SNX22 (ENSCCAG00000035856) #23 SNX1 (ENSCCAG00000036677) #24 CIAO2A (ENSCCAG00000018177) #25 DAPK2 (ENSCCAG00000026794) HERC1 (ENSCCAG00000023581) FBXL22 (ENSCCAG00000035888) USP3 (ENSCCAG00000029496) CA12 (ENSCCAG00000027249) Mas night monkey MODERN SPECIES 1045 SPG21 (ENSANAG00000024557) ANKDD1A (ENSANAG00000024207) PLEKHO2 (ENSANAG00000032112) PIF1 (ENSANAG00000026396) RBPMS2 (ENSANAG00000014652) OAZ2 (ENSANAG00000032482) ZNF609 (ENSANAG00000036036) ENSANAG00000020189 TRIP4 (ENSANAG00000027612) PCLAF (ENSANAG00000032895) ENSANAG00000020004 CSNK1G1 (ENSANAG00000034685) #21 ENSANAG00000038250 PPIB (ENSANAG00000038282) #22 SNX22 (ENSANAG00000031598) #23 SNX1 (ENSANAG00000028586) #24 CIAO2A (ENSANAG00000030216) #25 DAPK2 (ENSANAG00000025796) HERC1 (ENSANAG00000034456) FBXL22 (ENSANAG00000018462) ENSANAG00000019672 USP3 (ENSANAG00000038125) CA12 (ENSANAG00000031578) APH1B (ENSANAG00000024233) ENSANAG00000019426 RAB8B (ENSANAG00000014540) ENSANAG00000020165 ENSANAG00000028244 LACTB (ENSANAG00000033008) Catarrhini ANCESTRAL SPECIES 20 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00910000148680 ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00910000148680 ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00910000148680 ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 Vervet Monkey MODERN SPECIES 17 NPL (ENSCSAG00000012535) DHX9 (ENSCSAG00000012549) SHCBP1L (ENSCSAG00000012580) LAMC1 (ENSCSAG00000012606) LAMC2 (ENSCSAG00000012624) NMNAT2 (ENSCSAG00000012635) SMG7 (ENSCSAG00000012654) NCF2 (ENSCSAG00000012663) ARPC5 (ENSCSAG00000012676) APOBEC4 (ENSCSAG00000000243) ENSCSAG00000000244 RGL1 (ENSCSAG00000012682) COLGALT2 (ENSCSAG00000012787) TSEN15 (ENSCSAG00000012819) C1orf21 (ENSCSAG00000012828) ENSCSAG00000000245 #22 EDEM3 (ENSCSAG00000012843) NIBAN1 (ENSCSAG00000012855) RNF2 (ENSCSAG00000012868) TRMT1L (ENSCSAG00000012880) SWT1 (ENSCSAG00000012895) IVNS1ABP (ENSCSAG00000012909) ENSCSAG00000000246 HMCN1 (ENSCSAG00000013167) PRG4 (ENSCSAG00000013272) TPR (ENSCSAG00000013292) ODR4 (ENSCSAG00000013300) PDC (ENSCSAG00000013308) PTGS2 (ENSCSAG00000013318) PLA2G4A (ENSCSAG00000013326) ENSCSAG00000013330 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00910000148680 ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 Macaca ANCESTRAL SPECIES 1 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300.b ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 Pig-tailed macaque MODERN SPECIES 77 KBTBD13 (ENSMNEG00000014591) RASL12 (ENSMNEG00000043863) SLC51B (ENSMNEG00000037631) MTFMT (ENSMNEG00000040880) SPG21 (ENSMNEG00000040418) ANKDD1A (ENSMNEG00000037506) PLEKHO2 (ENSMNEG00000033712) PIF1 (ENSMNEG00000035581) RBPMS2 (ENSMNEG00000019330) OAZ2 (ENSMNEG00000014297) ZNF609 (ENSMNEG00000041662) ENSMNEG00000043120 TRIP4 (ENSMNEG00000033592) PCLAF (ENSMNEG00000030492) CSNK1G1 (ENSMNEG00000044820) #21 PPIB (ENSMNEG00000041616) #22 SNX22 (ENSMNEG00000032129) #23 SNX1 (ENSMNEG00000040604) #24 ENSMNEG00000038611 #25 DAPK2 (ENSMNEG00000037814) HERC1 (ENSMNEG00000042046) FBXL22 (ENSMNEG00000003587) USP3 (ENSMNEG00000040681) CA12 (ENSMNEG00000035236) APH1B (ENSMNEG00000034795) RAB8B (ENSMNEG00000033725) RPS27L (ENSMNEG00000033448) LACTB (ENSMNEG00000032367) TPM1 (ENSMNEG00000031245) ENSMNEG00000034201 TLN2 (ENSMNEG00000028802) Macaca_a ANCESTRAL SPECIES 2 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT01100000263539.b.b.a.a.a.b.b.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300.b ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000163765.e.b Crab-eating macaque MODERN SPECIES 17 MTFMT (ENSMFAG00000000627) SPG21 (ENSMFAG00000034518) ANKDD1A (ENSMFAG00000041562) ENSMFAG00000061600 PIF1 (ENSMFAG00000042218) RBPMS2 (ENSMFAG00000045343) OAZ2 (ENSMFAG00000000861) ENSMFAG00000050560 ZNF609 (ENSMFAG00000002867) TRIP4 (ENSMFAG00000036568) PCLAF (ENSMFAG00000064955) ENSMFAG00000063293 ENSMFAG00000000382 ENSMFAG00000065223 CSNK1G1 (ENSMFAG00000002355) #21 PPIB (ENSMFAG00000000853) #22 SNX22 (ENSMFAG00000042949) #23 SNX1 (ENSMFAG00000040273) #24 CIAO2A (ENSMFAG00000035924) #25 DAPK2 (ENSMFAG00000028166) ENSMFAG00000064675 HERC1 (ENSMFAG00000042846) FBXL22 (ENSMFAG00000000573) USP3 (ENSMFAG00000016075) CA12 (ENSMFAG00000040970) APH1B (ENSMFAG00000050606) RAB8B (ENSMFAG00000054576) ENSMFAG00000039460 LACTB (ENSMFAG00000001322) ENSMFAG00000030943 TLN2 (ENSMFAG00000003975) Rhesus MODERN SPECIES 17 RASL12 (ENSMMUG00000004029) SLC51B (ENSMMUG00000049468) MTFMT (ENSMMUG00000061537) SPG21 (ENSMMUG00000010949) ENSMMUG00000049680 ENSMMUG00000051023 ANKDD1A (ENSMMUG00000010948) ENSMMUG00000051391 PIF1 (ENSMMUG00000006366) RBPMS2 (ENSMMUG00000013270) OAZ2 (ENSMMUG00000044385) ZNF609 (ENSMMUG00000001247) TRIP4 (ENSMMUG00000009882) PCLAF (ENSMMUG00000029603) CSNK1G1 (ENSMMUG00000021124) #21 PPIB (ENSMMUG00000045241) #22 SNX22 (ENSMMUG00000021122) #23 SNX1 (ENSMMUG00000014005) #24 CIAO2A (ENSMMUG00000014004) #25 DAPK2 (ENSMMUG00000018177) HERC1 (ENSMMUG00000012117) FBXL22 (ENSMMUG00000012116) USP3 (ENSMMUG00000012114) CA12 (ENSMMUG00000021338) APH1B (ENSMMUG00000059755) RAB8B (ENSMMUG00000013460) RPS27L (ENSMMUG00000016350) LACTB (ENSMMUG00000003544) TPM1 (ENSMMUG00000001587) ENSMMUG00000056092 TLN2 (ENSMMUG00000011503) Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00910000148680 ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 Olive baboon MODERN SPECIES 17 KBTBD13 (ENSPANG00000007309) RASL12 (ENSPANG00000016745) SLC51B (ENSPANG00000016744) MTFMT (ENSPANG00000016759) SPG21 (ENSPANG00000016758) ANKDD1A (ENSPANG00000016757) ENSPANG00000034589 PLEKHO2 (ENSPANG00000016756) PIF1 (ENSPANG00000016755) RBPMS2 (ENSPANG00000016754) OAZ2 (ENSPANG00000016753) ZNF609 (ENSPANG00000016751) TRIP4 (ENSPANG00000016750) PCLAF (ENSPANG00000016813) CSNK1G1 (ENSPANG00000016816) #21 PPIB (ENSPANG00000046216) #22 SNX22 (ENSPANG00000016815) #23 SNX1 (ENSPANG00000016878) #24 ENSPANG00000016877 #25 DAPK2 (ENSPANG00000016876) HERC1 (ENSPANG00000016930) FBXL22 (ENSPANG00000029475) USP3 (ENSPANG00000016961) CA12 (ENSPANG00000016960) APH1B (ENSPANG00000016959) RAB8B (ENSPANG00000016985) RPS27L (ENSPANG00000034038) LACTB (ENSPANG00000016984) ENSPANG00000016983 ENSPANG00000048538 ENSPANG00000001886 Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 Drill MODERN SPECIES 253 SLC51B (ENSMLEG00000026018) MTFMT (ENSMLEG00000012111) SPG21 (ENSMLEG00000039160) ANKDD1A (ENSMLEG00000027812) PLEKHO2 (ENSMLEG00000020553) PIF1 (ENSMLEG00000037741) RBPMS2 (ENSMLEG00000035922) OAZ2 (ENSMLEG00000035152) ENSMLEG00000035161 ENSMLEG00000043031 ZNF609 (ENSMLEG00000041950) TRIP4 (ENSMLEG00000027911) PCLAF (ENSMLEG00000026006) ENSMLEG00000041658 CSNK1G1 (ENSMLEG00000030799) #21 PPIB (ENSMLEG00000028165) #22 SNX22 (ENSMLEG00000033044) #23 SNX1 (ENSMLEG00000033222) #24 ENSMLEG00000042755 #25 DAPK2 (ENSMLEG00000033599) HERC1 (ENSMLEG00000032497) FBXL22 (ENSMLEG00000010253) USP3 (ENSMLEG00000038500) CA12 (ENSMLEG00000038571) RAB8B (ENSMLEG00000033843) LACTB (ENSMLEG00000043855) TPM1 (ENSMLEG00000043798) ENSMLEG00000040651 TLN2 (ENSMLEG00000037977) ENSMLEG00000008407 ENSMLEG00000033514 Sooty mangabey MODERN SPECIES 336 KBTBD13 (ENSCATG00000021610) RASL12 (ENSCATG00000042289) SLC51B (ENSCATG00000043736) MTFMT (ENSCATG00000024224) SPG21 (ENSCATG00000043599) ANKDD1A (ENSCATG00000035001) PLEKHO2 (ENSCATG00000034692) PIF1 (ENSCATG00000030698) RBPMS2 (ENSCATG00000042116) OAZ2 (ENSCATG00000025657) ZNF609 (ENSCATG00000041765) ENSCATG00000037586 TRIP4 (ENSCATG00000041144) PCLAF (ENSCATG00000025742) CSNK1G1 (ENSCATG00000043325) #21 PPIB (ENSCATG00000040323) #22 SNX22 (ENSCATG00000002979) #23 SNX1 (ENSCATG00000033770) #24 CIAO2A (ENSCATG00000033389) #25 DAPK2 (ENSCATG00000043801) HERC1 (ENSCATG00000031246) FBXL22 (ENSCATG00000033595) USP3 (ENSCATG00000026128) CA12 (ENSCATG00000029646) APH1B (ENSCATG00000031142) RAB8B (ENSCATG00000034026) RPS27L (ENSCATG00000019220) LACTB (ENSCATG00000032182) TPM1 (ENSCATG00000043567) TLN2 (ENSCATG00000039955) ENSCATG00000020724 Rhinopithecus ANCESTRAL SPECIES 49 ENSGT00390000008092.b ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 Golden snub-nosed monkey MODERN SPECIES 3011 RASL12 (ENSRROG00000040793) SLC51B (ENSRROG00000010776) MTFMT (ENSRROG00000023835) SPG21 (ENSRROG00000001355) ANKDD1A (ENSRROG00000040585) PLEKHO2 (ENSRROG00000037689) PIF1 (ENSRROG00000031261) RBPMS2 (ENSRROG00000006473) OAZ2 (ENSRROG00000037730) ENSRROG00000031151 ZNF609 (ENSRROG00000027300) TRIP4 (ENSRROG00000030525) PCLAF (ENSRROG00000038580) ENSRROG00000037413 CSNK1G1 (ENSRROG00000038647) #21 PPIB (ENSRROG00000035509) #22 SNX22 (ENSRROG00000030756) #23 ENSRROG00000038172 SNX1 (ENSRROG00000044871) #24 CIAO2A (ENSRROG00000031571) #25 DAPK2 (ENSRROG00000029585) HERC1 (ENSRROG00000045183) FBXL22 (ENSRROG00000032880) USP3 (ENSRROG00000043098) Black snub-nosed monkey MODERN SPECIES 772 UBAP1L (ENSRBIG00000038643) RASL12 (ENSRBIG00000041270) SLC51B (ENSRBIG00000025591) MTFMT (ENSRBIG00000018525) SPG21 (ENSRBIG00000028369) ANKDD1A (ENSRBIG00000018797) PLEKHO2 (ENSRBIG00000041923) PIF1 (ENSRBIG00000032740) ENSRBIG00000028253 OAZ2 (ENSRBIG00000029389) ZNF609 (ENSRBIG00000018885) TRIP4 (ENSRBIG00000038027) ENSRBIG00000032907 ENSRBIG00000027525 CSNK1G1 (ENSRBIG00000043099) #21 PPIB (ENSRBIG00000024367) #22 SNX22 (ENSRBIG00000029016) #23 ENSRBIG00000043758 SNX1 (ENSRBIG00000035192) #24 CIAO2A (ENSRBIG00000030155) #25 DAPK2 (ENSRBIG00000029819) ENSRBIG00000006079 ENSRBIG00000030093 ENSRBIG00000029554 CHCHD3 (ENSRBIG00000029228) ENSRBIG00000040816 PLXNA4 (ENSRBIG00000036387) Hominoidea ANCESTRAL SPECIES 20 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00910000148680 ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a Gibbon MODERN SPECIES 21 RASL12 (ENSNLEG00000012613) SLC51B (ENSNLEG00000012610) MTFMT (ENSNLEG00000034733) SPG21 (ENSNLEG00000012567) ANKDD1A (ENSNLEG00000012524) ENSNLEG00000031983 PLEKHO2 (ENSNLEG00000026992) ENSNLEG00000012512 ENSNLEG00000012505 OAZ2 (ENSNLEG00000034581) ENSNLEG00000012477 TRIP4 (ENSNLEG00000012455) PCLAF (ENSNLEG00000029458) CSNK1G1 (ENSNLEG00000012422) #21 ENSNLEG00000027968 PPIB (ENSNLEG00000012419) #22 SNX22 (ENSNLEG00000012416) #23 SNX1 (ENSNLEG00000012400) #24 CIAO2A (ENSNLEG00000033312) #25 ENSNLEG00000012381 HERC1 (ENSNLEG00000012301) ENSNLEG00000012299 ENSNLEG00000029982 USP3 (ENSNLEG00000012274) CA12 (ENSNLEG00000012252) APH1B (ENSNLEG00000012240) RAB8B (ENSNLEG00000012227) RPS27L (ENSNLEG00000027571) LACTB (ENSNLEG00000012215) ENSNLEG00000012145 ENSNLEG00000006575 Hominidae ANCESTRAL SPECIES 22 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 22 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a Gorilla MODERN SPECIES 6 RASL12 (ENSGGOG00000024110) SLC51B (ENSGGOG00000015637) MTFMT (ENSGGOG00000001124) SPG21 (ENSGGOG00000004763) ANKDD1A (ENSGGOG00000003179) PLEKHO2 (ENSGGOG00000005801) PIF1 (ENSGGOG00000012347) RBPMS2 (ENSGGOG00000008984) OAZ2 (ENSGGOG00000013379) ENSGGOG00000026667 ZNF609 (ENSGGOG00000000867) TRIP4 (ENSGGOG00000022608) PCLAF (ENSGGOG00000003697) CSNK1G1 (ENSGGOG00000004826) #21 ENSGGOG00000042669 PPIB (ENSGGOG00000011086) #22 ENSGGOG00000038781 #23 SNX1 (ENSGGOG00000011072) #24 CIAO2A (ENSGGOG00000016550) #25 ENSGGOG00000016537 HERC1 (ENSGGOG00000013126) ENSGGOG00000024384 ENSGGOG00000044118 USP3 (ENSGGOG00000015288) CA12 (ENSGGOG00000002094) APH1B (ENSGGOG00000043020) RAB8B (ENSGGOG00000008799) RPS27L (ENSGGOG00000025910) LACTB (ENSGGOG00000014658) TPM1 (ENSGGOG00000009130) TLN2 (ENSGGOG00000015139) Homo/Pan group ANCESTRAL SPECIES 21 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 Pan ANCESTRAL SPECIES 20 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT01010000222997 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a.m #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00940000164336 ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 Chimpanzee MODERN SPECIES 6 RASL12 (ENSPTRG00000007173) SLC51B (ENSPTRG00000007172) MTFMT (ENSPTRG00000007171) SPG21 (ENSPTRG00000007170) ANKDD1A (ENSPTRG00000007169) PLEKHO2 (ENSPTRG00000007168) PIF1 (ENSPTRG00000007166) RBPMS2 (ENSPTRG00000007165) OAZ2 (ENSPTRG00000007164) ENSPTRG00000044786 ZNF609 (ENSPTRG00000007163) TRIP4 (ENSPTRG00000007160) PCLAF (ENSPTRG00000007159) ENSPTRG00000043374 CSNK1G1 (ENSPTRG00000007157) #21 PPIB (ENSPTRG00000007156) #22 SNX22 (ENSPTRG00000048032) #23 SNX1 (ENSPTRG00000007154) #24 CIAO2A (ENSPTRG00000007153) #25 DAPK2 (ENSPTRG00000007152) HERC1 (ENSPTRG00000007151) ENSPTRG00000051906 USP3 (ENSPTRG00000007149) CA12 (ENSPTRG00000051680) APH1B (ENSPTRG00000007146) RAB8B (ENSPTRG00000043064) ENSPTRG00000007144 LACTB (ENSPTRG00000007143) TPM1 (ENSPTRG00000007141) ENSPTRG00000043477 TLN2 (ENSPTRG00000007140) Bonobo MODERN SPECIES 6 RASL12 (ENSPPAG00000031385) SLC51B (ENSPPAG00000029986) MTFMT (ENSPPAG00000035142) SPG21 (ENSPPAG00000014442) ANKDD1A (ENSPPAG00000035127) PLEKHO2 (ENSPPAG00000021793) PIF1 (ENSPPAG00000026794) RBPMS2 (ENSPPAG00000024456) OAZ2 (ENSPPAG00000034182) ENSPPAG00000036324 ZNF609 (ENSPPAG00000040240) TRIP4 (ENSPPAG00000017953) PCLAF (ENSPPAG00000022409) ENSPPAG00000040513 CSNK1G1 (ENSPPAG00000036515) #21 PPIB (ENSPPAG00000033464) #22 SNX22 (ENSPPAG00000033060) #23 SNX1 (ENSPPAG00000032668) #24 CIAO2A (ENSPPAG00000026013) #25 DAPK2 (ENSPPAG00000036415) HERC1 (ENSPPAG00000027734) ENSPPAG00000043136 USP3 (ENSPPAG00000040233) CA12 (ENSPPAG00000043661) APH1B (ENSPPAG00000013129) RAB8B (ENSPPAG00000037656) ENSPPAG00000027359 LACTB (ENSPPAG00000032543) TPM1 (ENSPPAG00000004536) ENSPPAG00000032491 TLN2 (ENSPPAG00000035497) Human MODERN SPECIES 6 KBTBD13 (ENSG00000234438) RASL12 (ENSG00000103710) SLC51B (ENSG00000186198) MTFMT (ENSG00000103707) SPG21 (ENSG00000090487) ANKDD1A (ENSG00000166839) ENSG00000249240 PLEKHO2 (ENSG00000241839) PIF1 (ENSG00000140451) RBPMS2 (ENSG00000166831) OAZ2 (ENSG00000180304) ZNF609 (ENSG00000180357) TRIP4 (ENSG00000103671) PCLAF (ENSG00000166803) CSNK1G1 (ENSG00000169118) #21 PPIB (ENSG00000166794) #22 SNX22 (ENSG00000157734) #23 SNX1 (ENSG00000028528) #24 CIAO2A (ENSG00000166797) #25 DAPK2 (ENSG00000035664) HERC1 (ENSG00000103657) FBXL22 (ENSG00000197361) USP3 (ENSG00000140455) CA12 (ENSG00000074410) APH1B (ENSG00000138613) RAB8B (ENSG00000166128) RPS27L (ENSG00000185088) LACTB (ENSG00000103642) TPM1 (ENSG00000140416) TLN2 (ENSG00000171914) C2CD4B (ENSG00000205502) Orangutan MODERN SPECIES 6 UBAP1L (ENSPPYG00000030696) KBTBD13 (ENSPPYG00000006561) RASL12 (ENSPPYG00000006560) SLC51B (ENSPPYG00000037628) MTFMT (ENSPPYG00000006558) SPG21 (ENSPPYG00000006557) ANKDD1A (ENSPPYG00000006556) PLEKHO2 (ENSPPYG00000006555) PIF1 (ENSPPYG00000006554) RBPMS2 (ENSPPYG00000030244) OAZ2 (ENSPPYG00000006552) ZNF609 (ENSPPYG00000006551) TRIP4 (ENSPPYG00000006550) PCLAF (ENSPPYG00000006549) CSNK1G1 (ENSPPYG00000006548) #21 PPIB (ENSPPYG00000041014) #22 SNX22 (ENSPPYG00000040033) #23 SNX1 (ENSPPYG00000006545) #24 CIAO2A (ENSPPYG00000033735) #25 ENSPPYG00000006543 HERC1 (ENSPPYG00000029751) ENSPPYG00000036524 USP3 (ENSPPYG00000006541) CA12 (ENSPPYG00000006540) APH1B (ENSPPYG00000006539) RAB8B (ENSPPYG00000006538) ENSPPYG00000006537 LACTB (ENSPPYG00000006536) TPM1 (ENSPPYG00000006534) TLN2 (ENSPPYG00000006533) ENSPPYG00000033556 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000158007 #22 Common shrew DUPLICATION Common shrew MODERN SPECIES 8367 ENSSARG00000009442 #22 Common shrew MODERN SPECIES 7942 ENSSARG00000009121 #22 Hedgehog MODERN SPECIES 6137 ENSEEUG00000003383 #22 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Suina ANCESTRAL SPECIES 12 ENSGT01030000234535.E ENSGT00950000183103.d.a.b ENSGT00390000016258 ENSGT01030000234618.E ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Pig MODERN SPECIES FECH (ENSSSCG00000004541) ENSSSCG00000033063 NARS1 (ENSSSCG00000004542) MTFMT (ENSSSCG00000004543) SPG21 (ENSSSCG00000004544) ANKDD1A (ENSSSCG00000004545) ENSSSCG00000037998 PLEKHO2 (ENSSSCG00000004547) PIF1 (ENSSSCG00000004548) RBPMS2 (ENSSSCG00000004549) OAZ2 (ENSSSCG00000004550) ZNF609 (ENSSSCG00000004551) TRIP4 (ENSSSCG00000004552) PCLAF (ENSSSCG00000004554) CSNK1G1 (ENSSSCG00000004558) #21 PPIB (ENSSSCG00000034137) #22 SNX22 (ENSSSCG00000037275) #23 SNX1 (ENSSSCG00000042703) #24 ENSSSCG00000047502 CIAO2A (ENSSSCG00000034124) #25 DAPK2 (ENSSSCG00000021588) HERC1 (ENSSSCG00000004561) FBXL22 (ENSSSCG00000038786) ENSSSCG00000040895 USP3 (ENSSSCG00000028737) ENSSSCG00000059505 CA12 (ENSSSCG00000004565) APH1B (ENSSSCG00000032949) RAB8B (ENSSSCG00000026571) RPS27L (ENSSSCG00000023158) LACTB (ENSSSCG00000004569) Chacoan peccary MODERN SPECIES 192 ST8SIA3 (ENSCWAG00000002575) ONECUT2 (ENSCWAG00000002566) FECH (ENSCWAG00000002562) NARS1 (ENSCWAG00000002547) MTFMT (ENSCWAG00000002528) SPG21 (ENSCWAG00000002477) ANKDD1A (ENSCWAG00000002251) PLEKHO2 (ENSCWAG00000002191) PIF1 (ENSCWAG00000002168) ENSCWAG00000002157 OAZ2 (ENSCWAG00000002125) ZNF609 (ENSCWAG00000002093) TRIP4 (ENSCWAG00000002078) PCLAF (ENSCWAG00000002050) CSNK1G1 (ENSCWAG00000002007) #21 PPIB (ENSCWAG00000001979) #22 SNX22 (ENSCWAG00000001957) #23 SNX1 (ENSCWAG00000001903) #24 CIAO2A (ENSCWAG00000001878) #25 ENSCWAG00000001864 DAPK2 (ENSCWAG00000001815) HERC1 (ENSCWAG00000001772) FBXL22 (ENSCWAG00000001746) USP3 (ENSCWAG00000001654) CA12 (ENSCWAG00000001590) APH1B (ENSCWAG00000001558) RAB8B (ENSCWAG00000001533) RPS27L (ENSCWAG00000001510) LACTB (ENSCWAG00000001493) TPM1 (ENSCWAG00000001033) ENSCWAG00000000960 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Camelidae ANCESTRAL SPECIES 83 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 Arabian camel MODERN SPECIES 32 ENSCDRG00005001457 RASL12 (ENSCDRG00005001442) SLC51B (ENSCDRG00005001421) MTFMT (ENSCDRG00005001402) SPG21 (ENSCDRG00005001313) ANKDD1A (ENSCDRG00005001275) PLEKHO2 (ENSCDRG00005001250) PIF1 (ENSCDRG00005001226) RBPMS2 (ENSCDRG00005001201) OAZ2 (ENSCDRG00005001180) ENSCDRG00005001164 ZNF609 (ENSCDRG00005001141) TRIP4 (ENSCDRG00005001105) PCLAF (ENSCDRG00005001066) CSNK1G1 (ENSCDRG00005000938) #21 PPIB (ENSCDRG00005000872) #22 SNX22 (ENSCDRG00005000848) #23 SNX1 (ENSCDRG00005000795) #24 CIAO2A (ENSCDRG00005000749) #25 DAPK2 (ENSCDRG00005000708) ENSCDRG00005000684 HERC1 (ENSCDRG00005000577) FBXL22 (ENSCDRG00005000551) ENSCDRG00005000539 ENSCDRG00005000513 ENSCDRG00005000501 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Cetacea ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000153112.E.f.a.a.a ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Blue whale MODERN SPECIES 11 KBTBD13 (ENSBMSG00010005585) SLC51B (ENSBMSG00010005596) MTFMT (ENSBMSG00010005614) SPG21 (ENSBMSG00010005631) ENSBMSG00010005663 PLEKHO2 (ENSBMSG00010005672) PIF1 (ENSBMSG00010005687) ENSBMSG00010005716 ENSBMSG00010005733 OAZ2 (ENSBMSG00010005772) ZNF609 (ENSBMSG00010005793) TRIP4 (ENSBMSG00010005819) ENSBMSG00010005839 PCLAF (ENSBMSG00010005857) CSNK1G1 (ENSBMSG00010005923) #21 PPIB (ENSBMSG00010006066) #22 SNX22 (ENSBMSG00010006090) #23 SNX1 (ENSBMSG00010000037) #24 ENSBMSG00010000129 #25 DAPK2 (ENSBMSG00010000179) HERC1 (ENSBMSG00010000279) FBXL22 (ENSBMSG00010000348) USP3 (ENSBMSG00010000419) ENSBMSG00010000553 CA12 (ENSBMSG00010000588) APH1B (ENSBMSG00010000650) RAB8B (ENSBMSG00010000668) RPS27L (ENSBMSG00010000683) LACTB (ENSBMSG00010000701) TPM1 (ENSBMSG00010000776) TLN2 (ENSBMSG00010001027) Odontoceti ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000153112.E.f.a.a.a ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Sperm whale MODERN SPECIES 1120 ENSPCTG00005020610 PPIB (ENSPCTG00005020591) #22 SNX22 (ENSPCTG00005020552) #23 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000153112.E.f.a.a.a ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b.n ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000153112.E.f.a.a.a ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b.n ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Monodontidae ANCESTRAL SPECIES 27 ENSGT00390000000134.b.p.b ENSGT00940000153499.b.b ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093.c ENSGT00390000008748.b ENSGT00940000164579.e.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b.n ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Beluga whale MODERN SPECIES 20 RASL12 (ENSDLEG00000008693) SLC51B (ENSDLEG00000008675) MTFMT (ENSDLEG00000008641) SPG21 (ENSDLEG00000008610) PLEKHO2 (ENSDLEG00000008575) PIF1 (ENSDLEG00000008546) ENSDLEG00000008373 RBPMS2 (ENSDLEG00000008351) OAZ2 (ENSDLEG00000008260) ENSDLEG00000008230 ZNF609 (ENSDLEG00000008149) ENSDLEG00000008094 TRIP4 (ENSDLEG00000008070) PCLAF (ENSDLEG00000008054) CSNK1G1 (ENSDLEG00000007686) #21 PPIB (ENSDLEG00000007588) #22 SNX22 (ENSDLEG00000007576) #23 SNX1 (ENSDLEG00000007564) #24 FAM96A (ENSDLEG00000007545) #25 DAPK2 (ENSDLEG00000007441) HERC1 (ENSDLEG00000007012) FBXL22 (ENSDLEG00000006969) USP3 (ENSDLEG00000006410) ENSDLEG00000006340 CA12 (ENSDLEG00000006335) APH1B (ENSDLEG00000006318) RAB8B (ENSDLEG00000006295) ENSDLEG00000006289 LACTB (ENSDLEG00000006271) ENSDLEG00000006267 ENSDLEG00000006265 Narwhal MODERN SPECIES 308 SLC51B (ENSMMNG00015011224) MTFMT (ENSMMNG00015011203) ENSMMNG00015011175 ENSMMNG00015011156 PLEKHO2 (ENSMMNG00015011123) PIF1 (ENSMMNG00015011099) ENSMMNG00015011083 ENSMMNG00015011066 OAZ2 (ENSMMNG00015011033) ENSMMNG00015011020 ZNF609 (ENSMMNG00015010998) ENSMMNG00015010983 TRIP4 (ENSMMNG00015010965) PCLAF (ENSMMNG00015010932) CSNK1G1 (ENSMMNG00015010862) #21 PPIB (ENSMMNG00015010790) #22 SNX22 (ENSMMNG00015010760) #23 SNX1 (ENSMMNG00015010702) #24 CIAO2A (ENSMMNG00015010655) #25 DAPK2 (ENSMMNG00015010615) HERC1 (ENSMMNG00015010474) FBXL22 (ENSMMNG00015010396) USP3 (ENSMMNG00015010320) ENSMMNG00015010276 CA12 (ENSMMNG00015010246) APH1B (ENSMMNG00015010212) RAB8B (ENSMMNG00015010188) ENSMMNG00015010167 LACTB (ENSMMNG00015010148) TPM1 (ENSMMNG00015009957) TLN2 (ENSMMNG00015009817) Vaquita MODERN SPECIES 11 KBTBD13 (ENSPSNG00000003554) RASL12 (ENSPSNG00000003572) SLC51B (ENSPSNG00000003589) MTFMT (ENSPSNG00000003605) SPG21 (ENSPSNG00000003632) ENSPSNG00000003661 PLEKHO2 (ENSPSNG00000003679) PIF1 (ENSPSNG00000003695) ENSPSNG00000003712 ENSPSNG00000003721 ENSPSNG00000003739 ZNF609 (ENSPSNG00000003759) TRIP4 (ENSPSNG00000003783) PCLAF (ENSPSNG00000003831) CSNK1G1 (ENSPSNG00000003875) #21 PPIB (ENSPSNG00000003907) #22 ENSPSNG00000003925 #23 SNX1 (ENSPSNG00000003988) #24 CIAO2A (ENSPSNG00000004040) #25 DAPK2 (ENSPSNG00000004069) HERC1 (ENSPSNG00000000120) FBXL22 (ENSPSNG00000000167) USP3 (ENSPSNG00000000231) ENSPSNG00000000353 CA12 (ENSPSNG00000000410) APH1B (ENSPSNG00000000505) RAB8B (ENSPSNG00000000524) ENSPSNG00000000555 LACTB (ENSPSNG00000000570) TPM1 (ENSPSNG00000000684) TLN2 (ENSPSNG00000000901) Dolphin MODERN SPECIES 1659 CSNK1G1 (ENSTTRG00000013297) #21 ENSTTRG00000013293 #22 SNX22 (ENSTTRG00000013288) #23 SNX1 (ENSTTRG00000013278) #24 ENSTTRG00000013275 #25 Pecora ANCESTRAL SPECIES 6 ENSGT00390000005163 ENSGT00940000157901 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ENSGT00390000000628.m.b ENSGT01050000244902.b.c.b ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Percora_a ANCESTRAL SPECIES 8 ENSGT00390000005163 ENSGT00940000157901 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ENSGT00390000000628.m.b ENSGT01050000244902.b.c.b ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Bovidae ANCESTRAL SPECIES 7 ENSGT00940000157901 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ENSGT00390000000628.m.b ENSGT01050000244902.b.c.b ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00390000015789.c.b ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT00390000012916.y.a.b Bovinae ANCESTRAL SPECIES 11 ENSGT00940000157901 ENSGT00390000000628.m.b ENSGT01050000244902.b.c.b ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00940000154509.y.b.a.a.a ENSGT00390000005300 ENSGT00510000048252 ENSGT00390000015789.c.b ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062.e ENSGT00940000154699 ENSGT00940000162206.g ENSGT00940000162206.h Bos ANCESTRAL SPECIES 13 ENSGT00940000157901 ENSGT00390000000628.m.b ENSGT01050000244902.b.c.b ENSGT01100000263480.a.a.b.a.b.b.b.a.a.b.b.a.b.b.a.a ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00940000154509.y.b.a.a.a ENSGT00390000005300 ENSGT00510000048252 ENSGT00390000015789.c.b ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.a.a.a.b.b ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a.w ENSGT00390000001062.e ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000012916.y.a.b Bos_b ANCESTRAL SPECIES 11 ENSGT00390000005163 ENSGT00940000157901 ENSGT00390000000628.m.b ENSGT01050000244902.b.c.b ENSGT01100000263480.a.a.b.a.b.b.b.a.a.b.b.a.b.b.a.a ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00390000015789.c.b ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.a.a.a.b.b ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a.v ENSGT00390000001062.e ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000012916.y.a.b Hybrid Bos Indicus MODERN SPECIES 1 PTGDR (ENSBIXG00005003916) ENSBIXG00005003914 PLEKHO2 (ENSBIXG00005022913) PIF1 (ENSBIXG00005022827) RBPMS2 (ENSBIXG00005022800) ENSBIXG00005022761 OAZ2 (ENSBIXG00005022749) ENSBIXG00005022714 ZNF609 (ENSBIXG00005022684) ENSBIXG00005005451 ENSBIXG00005022611 PCLAF (ENSBIXG00005003860) ENSBIXG00005003842 CSNK1G1 (ENSBIXG00005022464) #21 SNX1 (ENSBIXG00005022359) #24 PPIB (ENSBIXG00005003793) #22 SNX22 (ENSBIXG00005022245) #23 ENSBIXG00005022228 CIAO2A (ENSBIXG00005005877) #25 DAPK2 (ENSBIXG00005022140) HERC1 (ENSBIXG00005021976) ENSBIXG00005003627 FBXL22 (ENSBIXG00005021495) USP3 (ENSBIXG00005003618) CA12 (ENSBIXG00005003586) APH1B (ENSBIXG00005021158) RAB8B (ENSBIXG00005021126) RPS27L (ENSBIXG00005021094) ENSBIXG00005021042 ENSBIXG00005021018 TPM1 (ENSBIXG00005020956) Cow MODERN SPECIES 1 GNG2 (ENSBTAG00000003043) RTRAF (ENSBTAG00000021944) NID2 (ENSBTAG00000021945) ENSBTAG00000001423 PTGDR (ENSBTAG00000006703) PLEKHO2 (ENSBTAG00000008411) PIF1 (ENSBTAG00000007638) RBPMS2 (ENSBTAG00000011037) OAZ2 (ENSBTAG00000015806) ZNF609 (ENSBTAG00000015808) TRIP4 (ENSBTAG00000014493) ENSBTAG00000049725 PCLAF (ENSBTAG00000039462) CSNK1G1 (ENSBTAG00000016823) #21 ENSBTAG00000049412 PPIB (ENSBTAG00000016822) #22 SNX22 (ENSBTAG00000016821) #23 SNX1 (ENSBTAG00000002014) #24 CIAO2A (ENSBTAG00000002012) #25 DAPK2 (ENSBTAG00000011820) HERC1 (ENSBTAG00000053677) ENSBTAG00000052707 ENSBTAG00000051076 ENSBTAG00000054388 ENSBTAG00000050908 ENSBTAG00000019474 FBXL22 (ENSBTAG00000008807) USP3 (ENSBTAG00000008805) CA12 (ENSBTAG00000019390) APH1B (ENSBTAG00000010641) RAB8B (ENSBTAG00000011146) Bos_a ANCESTRAL SPECIES 53 ENSGT00390000005163 ENSGT00940000157901 ENSGT01100000263481.n.a.b.b.a.b.b.b.a.b.a.a ENSGT00390000000628.m.b ENSGT01050000244902.b.c.b ENSGT01100000263480.a.a.b.a.b.b.b.a.a.b.b.a.b.b.a.a ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00940000154509.y.b.a.a.a ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.a.a.a.b.b ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a.w ENSGT00390000001062.e ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000012916.y.a.b Domestic yak MODERN SPECIES 2 ENSBGRG00000022887 ENSBGRG00000022900 ENSBGRG00000022925 ENSBGRG00000022958 PTGDR (ENSBGRG00000023005) ENSBGRG00000023030 PLEKHO2 (ENSBGRG00000023055) PIF1 (ENSBGRG00000023115) RBPMS2 (ENSBGRG00000023193) OAZ2 (ENSBGRG00000023251) ZNF609 (ENSBGRG00000023364) ENSBGRG00000023399 TRIP4 (ENSBGRG00000023426) PCLAF (ENSBGRG00000023565) CSNK1G1 (ENSBGRG00000023776) #21 PPIB (ENSBGRG00000024663) #22 SNX22 (ENSBGRG00000024686) #23 ENSBGRG00000024710 SNX1 (ENSBGRG00000024722) #24 CIAO2A (ENSBGRG00000024771) #25 DAPK2 (ENSBGRG00000024836) HERC1 (ENSBGRG00000025007) FBXL22 (ENSBGRG00000025878) USP3 (ENSBGRG00000025898) CA12 (ENSBGRG00000026023) APH1B (ENSBGRG00000003624) RAB8B (ENSBGRG00000003715) ENSBGRG00000003772 LACTB (ENSBGRG00000003854) ENSBGRG00000003930 ENSBGRG00000003954 Wild yak MODERN SPECIES 658 ENSBMUG00000005089 NID2 (ENSBMUG00000005047) ENSBMUG00000004970 ENSBMUG00000004942 PTGDR (ENSBMUG00000004918) PLEKHO2 (ENSBMUG00000004851) PIF1 (ENSBMUG00000004819) RBPMS2 (ENSBMUG00000004804) OAZ2 (ENSBMUG00000004795) ENSBMUG00000004747 ZNF609 (ENSBMUG00000004718) ENSBMUG00000004704 TRIP4 (ENSBMUG00000004690) PCLAF (ENSBMUG00000004667) CSNK1G1 (ENSBMUG00000004474) #21 PPIB (ENSBMUG00000004309) #22 SNX22 (ENSBMUG00000004300) #23 SNX1 (ENSBMUG00000004277) #24 CIAO2A (ENSBMUG00000004234) #25 DAPK2 (ENSBMUG00000004177) HERC1 (ENSBMUG00000004110) FBXL22 (ENSBMUG00000004031) USP3 (ENSBMUG00000003861) CA12 (ENSBMUG00000003495) APH1B (ENSBMUG00000003435) RAB8B (ENSBMUG00000003418) ENSBMUG00000003407 LACTB (ENSBMUG00000003387) American bison MODERN SPECIES 3065 ENSBBBG00000001890 PTGDR (ENSBBBG00000010775) PLEKHO2 (ENSBBBG00000010766) PIF1 (ENSBBBG00000010755) ENSBBBG00000010738 OAZ2 (ENSBBBG00000010729) ENSBBBG00000010721 ZNF609 (ENSBBBG00000010716) ENSBBBG00000001869 TRIP4 (ENSBBBG00000010678) PCLAF (ENSBBBG00000001865) CSNK1G1 (ENSBBBG00000010615) #21 PPIB (ENSBBBG00000010506) #22 SNX22 (ENSBBBG00000010498) #23 SNX1 (ENSBBBG00000010491) #24 CIAO2A (ENSBBBG00000010454) #25 DAPK2 (ENSBBBG00000008435) HERC1 (ENSBBBG00000008434) FBXL22 (ENSBBBG00000010384) USP3 (ENSBBBG00000010371) CA12 (ENSBBBG00000010315) ENSBBBG00000010302 ENSBBBG00000010299 ENSBBBG00000010291 ENSBBBG00000000108 ENSBBBG00000000128 ENSBBBG00000008318 ENSBBBG00000010249 Caprinae ANCESTRAL SPECIES 11 ENSGT00940000155517 ENSGT01100000263497.C ENSGT00390000005163 ENSGT00940000157901 ENSGT01050000244902.b.c.b ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00390000015789.c.b ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT00390000012916.y.a.b Rambouillet Sheep MODERN SPECIES 23 GNG2 (ENSOARG00020023501) RTRAF (ENSOARG00020023533) NID2 (ENSOARG00020023556) ENSOARG00020023613 ENSOARG00020023633 ENSOARG00020023643 PTGDR (ENSOARG00020023654) PLEKHO2 (ENSOARG00020023668) PIF1 (ENSOARG00020023726) RBPMS2 (ENSOARG00020023782) OAZ2 (ENSOARG00020023813) ZNF609 (ENSOARG00020023856) TRIP4 (ENSOARG00020023887) PCLAF (ENSOARG00020023913) CSNK1G1 (ENSOARG00020024000) #21 PPIB (ENSOARG00020024684) #22 SNX22 (ENSOARG00020007311) #23 SNX1 (ENSOARG00020007347) #24 ENSOARG00020007473 #25 DAPK2 (ENSOARG00020007501) HERC1 (ENSOARG00020007683) FBXL22 (ENSOARG00020007949) USP3 (ENSOARG00020008050) APH1B (ENSOARG00020008742) RAB8B (ENSOARG00020008761) RPS27L (ENSOARG00020008837) LACTB (ENSOARG00020008870) TPM1 (ENSOARG00020009011) TLN2 (ENSOARG00020009618) ENSOARG00020010758 VPS13C (ENSOARG00020011169) Goat MODERN SPECIES 1 ENSCHIG00000007229 GNG2 (ENSCHIG00000010532) RTRAF (ENSCHIG00000018490) NID2 (ENSCHIG00000018670) PTGDR (ENSCHIG00000025921) PLEKHO2 (ENSCHIG00000025653) PIF1 (ENSCHIG00000014856) RBPMS2 (ENSCHIG00000024439) OAZ2 (ENSCHIG00000012878) ENSCHIG00000009189 ZNF609 (ENSCHIG00000018695) TRIP4 (ENSCHIG00000023818) ENSCHIG00000014821 PCLAF (ENSCHIG00000026661) CSNK1G1 (ENSCHIG00000011234) #21 PPIB (ENSCHIG00000019546) #22 SNX22 (ENSCHIG00000020098) #23 SNX1 (ENSCHIG00000021997) #24 ENSCHIG00000006307 #25 DAPK2 (ENSCHIG00000002285) HERC1 (ENSCHIG00000012880) FBXL22 (ENSCHIG00000023260) ENSCHIG00000015955 USP3 (ENSCHIG00000019905) CA12 (ENSCHIG00000004709) APH1B (ENSCHIG00000019602) ENSCHIG00000016246 RAB8B (ENSCHIG00000019412) RPS27L (ENSCHIG00000012945) LACTB (ENSCHIG00000027114) ENSCHIG00000018051 Siberian musk deer MODERN SPECIES 367 ENSMMSG00000015674 NID2 (ENSMMSG00000015694) ENSMMSG00000015752 ENSMMSG00000015763 PTGDR (ENSMMSG00000015794) ENSMMSG00000015839 ENSMMSG00000015854 PLEKHO2 (ENSMMSG00000015873) PIF1 (ENSMMSG00000015904) ENSMMSG00000015991 OAZ2 (ENSMMSG00000016048) ZNF609 (ENSMMSG00000016094) TRIP4 (ENSMMSG00000016140) ENSMMSG00000016175 CSNK1G1 (ENSMMSG00000016321) #21 PPIB (ENSMMSG00000016470) #22 SNX22 (ENSMMSG00000016511) #23 SNX1 (ENSMMSG00000016577) #24 ENSMMSG00000016708 #25 DAPK2 (ENSMMSG00000016817) HERC1 (ENSMMSG00000016958) FBXL22 (ENSMMSG00000017073) USP3 (ENSMMSG00000017104) CA12 (ENSMMSG00000017392) APH1B (ENSMMSG00000017507) RAB8B (ENSMMSG00000017553) RPS27L (ENSMMSG00000017596) LACTB (ENSMMSG00000017653) ENSMMSG00000017695 Yarkand deer MODERN SPECIES 3 FRMD6 (ENSCHYG00000025157) GNG2 (ENSCHYG00000025234) ENSCHYG00000025262 NID2 (ENSCHYG00000025307) ENSCHYG00000025691 PTGDR (ENSCHYG00000025706) PLEKHO2 (ENSCHYG00000004921) PIF1 (ENSCHYG00000005000) RBPMS2 (ENSCHYG00000005045) OAZ2 (ENSCHYG00000005167) ZNF609 (ENSCHYG00000005274) ENSCHYG00000005301 TRIP4 (ENSCHYG00000005334) PCLAF (ENSCHYG00000005442) CSNK1G1 (ENSCHYG00000005550) #21 ENSCHYG00000005700 #22 SNX22 (ENSCHYG00000005765) #23 SNX1 (ENSCHYG00000005852) #24 CIAO2A (ENSCHYG00000005972) #25 ENSCHYG00000005987 HERC1 (ENSCHYG00000006046) FBXL22 (ENSCHYG00000006365) USP3 (ENSCHYG00000006402) ENSCHYG00000006718 CA12 (ENSCHYG00000006765) ENSCHYG00000006915 APH1B (ENSCHYG00000006935) RAB8B (ENSCHYG00000006985) ENSCHYG00000007049 ENSCHYG00000007078 LACTB (ENSCHYG00000007150) Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Chiroptera ANCESTRAL SPECIES 17 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00940000164336 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Microchiroptera ANCESTRAL SPECIES 20 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Greater horseshoe bat MODERN SPECIES 24 KBTBD13 (ENSRFEG00010007789) RASL12 (ENSRFEG00010007809) SLC51B (ENSRFEG00010007859) MTFMT (ENSRFEG00010007904) SPG21 (ENSRFEG00010007949) ANKDD1A (ENSRFEG00010008103) PLEKHO2 (ENSRFEG00010008395) PIF1 (ENSRFEG00010008484) RBPMS2 (ENSRFEG00010008568) OAZ2 (ENSRFEG00010008661) ENSRFEG00010008724 ZNF609 (ENSRFEG00010008748) TRIP4 (ENSRFEG00010008797) PCLAF (ENSRFEG00010008826) CSNK1G1 (ENSRFEG00010008947) #21 PPIB (ENSRFEG00010009072) #22 SNX22 (ENSRFEG00010009114) #23 SNX1 (ENSRFEG00010009203) #24 CIAO2A (ENSRFEG00010009329) #25 DAPK2 (ENSRFEG00010009400) ENSRFEG00010009525 ENSRFEG00010009583 FBXL22 (ENSRFEG00010009644) USP3 (ENSRFEG00010009665) CA12 (ENSRFEG00010009883) APH1B (ENSRFEG00010009953) RAB8B (ENSRFEG00010010042) ENSRFEG00010010077 LACTB (ENSRFEG00010010152) ENSRFEG00010010201 TPM1 (ENSRFEG00010010379) Microbat MODERN SPECIES 1052 RASL12 (ENSMLUG00000016438) SLC51B (ENSMLUG00000016432) MTFMT (ENSMLUG00000016414) SPG21 (ENSMLUG00000016404) ANKDD1A (ENSMLUG00000016394) ENSMLUG00000029215 PLEKHO2 (ENSMLUG00000016390) PIF1 (ENSMLUG00000025361) RBPMS2 (ENSMLUG00000013394) OAZ2 (ENSMLUG00000022795) ZNF609 (ENSMLUG00000013380) ENSMLUG00000025127 TRIP4 (ENSMLUG00000013367) ENSMLUG00000013366 CSNK1G1 (ENSMLUG00000015983) #21 PPIB (ENSMLUG00000015974) #22 SNX22 (ENSMLUG00000015965) #23 SNX1 (ENSMLUG00000015949) #24 ENSMLUG00000028233 #25 DAPK2 (ENSMLUG00000000714) HERC1 (ENSMLUG00000015305) FBXL22 (ENSMLUG00000024826) USP3 (ENSMLUG00000015294) ENSMLUG00000000719 #25 CA12 (ENSMLUG00000007452) APH1B (ENSMLUG00000026317) RAB8B (ENSMLUG00000015889) ENSMLUG00000005516 TPM1 (ENSMLUG00000007003) TLN2 (ENSMLUG00000009302) ENSMLUG00000026677 Megabat MODERN SPECIES 937 CSNK1G1 (ENSPVAG00000016873) #21 PPIB (ENSPVAG00000016872) #22 SNX22 (ENSPVAG00000016871) #23 SNX1 (ENSPVAG00000016870) #24 CIAO2A (ENSPVAG00000016869) #25 DAPK2 (ENSPVAG00000016867) HERC1 (ENSPVAG00000016862) FBXL22 (ENSPVAG00000016860) USP3 (ENSPVAG00000016857) Equus ANCESTRAL SPECIES 4 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00950000186329 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT01030000234542.b.a.a.b.a.b.l Horse MODERN SPECIES KBTBD13 (ENSECAG00000003990) RASL12 (ENSECAG00000009263) SLC51B (ENSECAG00000012241) MTFMT (ENSECAG00000012255) SPG21 (ENSECAG00000012886) ANKDD1A (ENSECAG00000017284) PLEKHO2 (ENSECAG00000022172) PIF1 (ENSECAG00000005316) RBPMS2 (ENSECAG00000015345) ZNF609 (ENSECAG00000024130) OAZ2 (ENSECAG00000018627) TRIP4 (ENSECAG00000024689) ENSECAG00000026891 CSNK1G1 (ENSECAG00000006597) #21 ENSECAG00000052585 PPIB (ENSECAG00000017164) #22 SNX22 (ENSECAG00000017605) #23 SNX1 (ENSECAG00000019019) #24 CIAO2A (ENSECAG00000010303) #25 DAPK2 (ENSECAG00000012621) HERC1 (ENSECAG00000022635) ENSECAG00000022138 ENSECAG00000060278 FBXL22 (ENSECAG00000016041) USP3 (ENSECAG00000016660) CA12 (ENSECAG00000017217) APH1B (ENSECAG00000001985) RAB8B (ENSECAG00000036923) RPS27L (ENSECAG00000013269) LACTB (ENSECAG00000053700) TPM1 (ENSECAG00000014949) Donkey DUPLICATION Donkey MODERN SPECIES 11 KBTBD13 (ENSEASG00005036296) RASL12 (ENSEASG00005006494) SLC51B (ENSEASG00005029917) MTFMT (ENSEASG00005006503) SPG21 (ENSEASG00005006508) ANKDD1A (ENSEASG00005006509) PLEKHO2 (ENSEASG00005033707) PIF1 (ENSEASG00005006515) RBPMS2 (ENSEASG00005006523) OAZ2 (ENSEASG00005024051) ZNF609 (ENSEASG00005006535) TRIP4 (ENSEASG00005006538) ENSEASG00005006541 CSNK1G1 (ENSEASG00005006542) #21 ENSEASG00005033915 PPIB (ENSEASG00005024211) #22 SNX22 (ENSEASG00005036797) #23 SNX1 (ENSEASG00005006579) #24 CIAO2A (ENSEASG00005036756) #25 DAPK2 (ENSEASG00005006626) ENSEASG00005006635 HERC1 (ENSEASG00005006663) FBXL22 (ENSEASG00005031318) USP3 (ENSEASG00005006813) CA12 (ENSEASG00005005325) APH1B (ENSEASG00005005328) ENSEASG00005005334 RAB8B (ENSEASG00005038003) RPS27L (ENSEASG00005031631) LACTB (ENSEASG00005005348) ENSEASG00005031100 Donkey MODERN SPECIES 15 BNC2 (ENSEASG00005019302) CCDC171 (ENSEASG00005019311) PSIP1 (ENSEASG00005019322) SNAPC3 (ENSEASG00005019324) TTC39B (ENSEASG00005019326) FREM1 (ENSEASG00005019331) CER1 (ENSEASG00005024797) ZDHHC21 (ENSEASG00005019341) NFIB (ENSEASG00005019346) MPDZ (ENSEASG00005019366) LURAP1L (ENSEASG00005031483) TYRP1 (ENSEASG00005019393) PTPRD (ENSEASG00005010959) ENSEASG00005010725 DMAC1 (ENSEASG00005010719) ENSEASG00005026087 #22 KDM4C (ENSEASG00005010714) GLDC (ENSEASG00005010707) UHRF2 (ENSEASG00005010699) TPD52L3 (ENSEASG00005036119) IL33 (ENSEASG00005010691) ENSEASG00005029347 KIAA2026 (ENSEASG00005010685) MLANA (ENSEASG00005028588) ERMP1 (ENSEASG00005010680) RIC1 (ENSEASG00005010673) PDCD1LG2 (ENSEASG00005010667) CD274 (ENSEASG00005010663) PLGRKT (ENSEASG00005034012) ENSEASG00005010659 INSL6 (ENSEASG00005037792) Carnivora ANCESTRAL SPECIES ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 Felidae ANCESTRAL SPECIES 1 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00940000164336 ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Panthera ANCESTRAL SPECIES 3 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00940000164336 ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Panthera_a ANCESTRAL SPECIES 15 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00940000164336 ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 leopard MODERN SPECIES 7 RASL12 (ENSPPRG00000024033) SLC51B (ENSPPRG00000024145) MTFMT (ENSPPRG00000024322) SPG21 (ENSPPRG00000024485) ANKDD1A (ENSPPRG00000021337) PLEKHO2 (ENSPPRG00000018753) PIF1 (ENSPPRG00000018031) RBPMS2 (ENSPPRG00000014944) OAZ2 (ENSPPRG00000014549) ENSPPRG00000014194 ENSPPRG00000014718 ZNF609 (ENSPPRG00000013974) TRIP4 (ENSPPRG00000013668) PCLAF (ENSPPRG00000013231) CSNK1G1 (ENSPPRG00000012107) #21 PPIB (ENSPPRG00000008423) #22 SNX22 (ENSPPRG00000008270) #23 SNX1 (ENSPPRG00000008151) #24 CIAO2A (ENSPPRG00000007232) #25 DAPK2 (ENSPPRG00000007000) HERC1 (ENSPPRG00000006219) FBXL22 (ENSPPRG00000004585) USP3 (ENSPPRG00000004518) CA12 (ENSPPRG00000002981) APH1B (ENSPPRG00000002047) RAB8B (ENSPPRG00000000194) ENSPPRG00000023087 LACTB (ENSPPRG00000023298) TPM1 (ENSPPRG00000023409) ENSPPRG00000023820 TLN2 (ENSPPRG00000024152) lion MODERN SPECIES 6 UBAP1L (ENSPLOG00000010817) KBTBD13 (ENSPLOG00000010867) RASL12 (ENSPLOG00000010906) SLC51B (ENSPLOG00000010972) MTFMT (ENSPLOG00000011004) SPG21 (ENSPLOG00000011106) ANKDD1A (ENSPLOG00000011255) PLEKHO2 (ENSPLOG00000011538) PIF1 (ENSPLOG00000011589) RBPMS2 (ENSPLOG00000011704) OAZ2 (ENSPLOG00000011762) ZNF609 (ENSPLOG00000011829) TRIP4 (ENSPLOG00000011893) PCLAF (ENSPLOG00000012084) CSNK1G1 (ENSPLOG00000012225) #21 PPIB (ENSPLOG00000012340) #22 SNX22 (ENSPLOG00000012383) #23 SNX1 (ENSPLOG00000012451) #24 CIAO2A (ENSPLOG00000012765) #25 DAPK2 (ENSPLOG00000012895) HERC1 (ENSPLOG00000013050) FBXL22 (ENSPLOG00000013600) USP3 (ENSPLOG00000013694) CA12 (ENSPLOG00000014410) APH1B (ENSPLOG00000014734) ENSPLOG00000014920 RAB8B (ENSPLOG00000014958) ENSPLOG00000014988 LACTB (ENSPLOG00000015093) TPM1 (ENSPLOG00000015292) TLN2 (ENSPLOG00000015663) Tiger MODERN SPECIES 204 UBAP1L (ENSPTIG00000021877) ENSPTIG00000005399 RASL12 (ENSPTIG00000021753) SLC51B (ENSPTIG00000021613) MTFMT (ENSPTIG00000021473) SPG21 (ENSPTIG00000021286) ANKDD1A (ENSPTIG00000020864) PLEKHO2 (ENSPTIG00000020432) PIF1 (ENSPTIG00000018479) RBPMS2 (ENSPTIG00000017879) ENSPTIG00000017213 ZNF609 (ENSPTIG00000015732) TRIP4 (ENSPTIG00000014502) PCLAF (ENSPTIG00000011600) CSNK1G1 (ENSPTIG00000007978) #21 PPIB (ENSPTIG00000007537) #22 SNX22 (ENSPTIG00000006889) #23 SNX1 (ENSPTIG00000000317) #24 CIAO2A (ENSPTIG00000021384) #25 DAPK2 (ENSPTIG00000020724) HERC1 (ENSPTIG00000016505) ENSPTIG00000014494 USP3 (ENSPTIG00000010649) CA12 (ENSPTIG00000008179) APH1B (ENSPTIG00000007498) ENSPTIG00000007292 RAB8B (ENSPTIG00000005636) ENSPTIG00000000664 LACTB (ENSPTIG00000021953) TPM1 (ENSPTIG00000020687) TLN2 (ENSPTIG00000013165) Cat MODERN SPECIES 237 UBAP1L (ENSFCAG00000044872) KBTBD13 (ENSFCAG00000030165) RASL12 (ENSFCAG00000011458) SLC51B (ENSFCAG00000026998) MTFMT (ENSFCAG00000011455) SPG21 (ENSFCAG00000011454) ANKDD1A (ENSFCAG00000011452) PLEKHO2 (ENSFCAG00000040159) PIF1 (ENSFCAG00000011335) RBPMS2 (ENSFCAG00000032451) OAZ2 (ENSFCAG00000011332) ZNF609 (ENSFCAG00000011328) TRIP4 (ENSFCAG00000010618) PCLAF (ENSFCAG00000039663) CSNK1G1 (ENSFCAG00000004183) #21 PPIB (ENSFCAG00000033734) #22 SNX22 (ENSFCAG00000004182) #23 SNX1 (ENSFCAG00000004179) #24 CIAO2A (ENSFCAG00000046793) #25 DAPK2 (ENSFCAG00000004177) HERC1 (ENSFCAG00000008990) FBXL22 (ENSFCAG00000046790) USP3 (ENSFCAG00000028788) CA12 (ENSFCAG00000029058) APH1B (ENSFCAG00000040244) ENSFCAG00000053373 ENSFCAG00000053387 RAB8B (ENSFCAG00000031584) ENSFCAG00000033932 LACTB (ENSFCAG00000027796) TPM1 (ENSFCAG00000037855) Caniformia ANCESTRAL SPECIES 12 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 Caniformia_b ANCESTRAL SPECIES 15 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Mustelinae ANCESTRAL SPECIES 66 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 Ferret MODERN SPECIES 228 PDCD7 (ENSMPUG00000000523) UBAP1L (ENSMPUG00000000525) KBTBD13 (ENSMPUG00000019445) RASL12 (ENSMPUG00000000526) MTFMT (ENSMPUG00000000527) SPG21 (ENSMPUG00000000528) ANKDD1A (ENSMPUG00000000544) PLEKHO2 (ENSMPUG00000000547) PIF1 (ENSMPUG00000000549) RBPMS2 (ENSMPUG00000000553) OAZ2 (ENSMPUG00000000565) ZNF609 (ENSMPUG00000000567) TRIP4 (ENSMPUG00000000568) PCLAF (ENSMPUG00000000569) CSNK1G1 (ENSMPUG00000000571) #21 PPIB (ENSMPUG00000000574) #22 SNX22 (ENSMPUG00000000582) #23 SNX1 (ENSMPUG00000000602) #24 CIAO2A (ENSMPUG00000000605) #25 DAPK2 (ENSMPUG00000000608) HERC1 (ENSMPUG00000000611) FBXL22 (ENSMPUG00000000624) USP3 (ENSMPUG00000000628) CA12 (ENSMPUG00000000635) APH1B (ENSMPUG00000000639) RAB8B (ENSMPUG00000000643) RPS27L (ENSMPUG00000000647) LACTB (ENSMPUG00000000649) TPM1 (ENSMPUG00000000651) TLN2 (ENSMPUG00000000655) ENSMPUG00000000658 American mink MODERN SPECIES 46 KBTBD13 (ENSNVIG00000017694) RASL12 (ENSNVIG00000017710) SLC51B (ENSNVIG00000017732) MTFMT (ENSNVIG00000017747) SPG21 (ENSNVIG00000017776) ANKDD1A (ENSNVIG00000017875) PKHO2 (ENSNVIG00000017954) PIF1 (ENSNVIG00000018009) RBPMS2 (ENSNVIG00000018045) OAZ2 (ENSNVIG00000018100) ZNF609 (ENSNVIG00000018141) ENSNVIG00000018166 PAF (ENSNVIG00000018189) KC1G1 (ENSNVIG00000018229) #21 ENSNVIG00000018254 PPIB (ENSNVIG00000018257) #22 SNX22 (ENSNVIG00000018265) #23 SNX1 (ENSNVIG00000018288) #24 CIAO2A (ENSNVIG00000018334) #25 DAPK2 (ENSNVIG00000018354) HERC1 (ENSNVIG00000018418) ENSNVIG00000018479 UBP3 (ENSNVIG00000018489) CA12 (ENSNVIG00000018640) APH1B (ENSNVIG00000018717) RAB8B (ENSNVIG00000018748) ENSNVIG00000018758 LACTB (ENSNVIG00000018777) TPM1 (ENSNVIG00000018804) ENSNVIG00000018989 TLN2 (ENSNVIG00000019004) Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES ENSGT00940000158007.o #22 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1577 ENSAMEG00000024744 #22 Giant Panda MODERN SPECIES 1766 ENSAMEG00000027769 #22 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES ENSGT00940000158007.p.a #22 Giant Panda MODERN SPECIES 1667 ENSAMEG00000026387 #22 Ursidae ANCESTRAL SPECIES 21 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007.p.b #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a Ursus ANCESTRAL SPECIES 37 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007.p.b #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00950000185788 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 Polar bear MODERN SPECIES 320 CILP (ENSUMAG00000012508) CLPX (ENSUMAG00000012513) ENSUMAG00000012533 RASL12 (ENSUMAG00000012538) SLC51B (ENSUMAG00000012546) MTFMT (ENSUMAG00000012561) SPG21 (ENSUMAG00000012587) PLEKHO2 (ENSUMAG00000012599) PIF1 (ENSUMAG00000012605) RBPMS2 (ENSUMAG00000012614) OAZ2 (ENSUMAG00000012619) ZNF609 (ENSUMAG00000012625) TRIP4 (ENSUMAG00000012640) PCLAF (ENSUMAG00000012643) CSNK1G1 (ENSUMAG00000012647) #21 PPIB (ENSUMAG00000012657) #22 SNX22 (ENSUMAG00000012660) #23 SNX1 (ENSUMAG00000012667) #24 CIAO2A (ENSUMAG00000012686) #25 DAPK2 (ENSUMAG00000012690) ENSUMAG00000012698 HERC1 (ENSUMAG00000012791) ENSUMAG00000013533 USP3 (ENSUMAG00000013554) CA12 (ENSUMAG00000013569) APH1B (ENSUMAG00000013596) ENSUMAG00000013601 RAB8B (ENSUMAG00000013613) American black bear MODERN SPECIES 1842 TRIP4 (ENSUAMG00000022913) CSNK1G1 (ENSUAMG00000022850) #21 PPIB (ENSUAMG00000022843) #22 Giant Panda MODERN SPECIES 15 UBAP1L (ENSAMEG00000030738) KBTBD13 (ENSAMEG00000025813) RASL12 (ENSAMEG00000029508) ENSAMEG00000002772 MTFMT (ENSAMEG00000002756) SPG21 (ENSAMEG00000002738) ANKDD1A (ENSAMEG00000002723) PLEKHO2 (ENSAMEG00000029578) PIF1 (ENSAMEG00000002688) ENSAMEG00000002664 OAZ2 (ENSAMEG00000002648) ZNF609 (ENSAMEG00000002630) TRIP4 (ENSAMEG00000002591) PCLAF (ENSAMEG00000002586) CSNK1G1 (ENSAMEG00000002545) #21 ENSAMEG00000002525 #22 SNX22 (ENSAMEG00000002516) #23 SNX1 (ENSAMEG00000002465) #24 CIAO2A (ENSAMEG00000002448) #25 DAPK2 (ENSAMEG00000002421) HERC1 (ENSAMEG00000002389) FBXL22 (ENSAMEG00000002387) USP3 (ENSAMEG00000002345) CA12 (ENSAMEG00000002328) APH1B (ENSAMEG00000002312) ENSAMEG00000031452 RAB8B (ENSAMEG00000002292) RPS27L (ENSAMEG00000007270) LACTB (ENSAMEG00000007262) ENSAMEG00000007224 TLN2 (ENSAMEG00000012004) Canidae ANCESTRAL SPECIES 15 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167.q ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00900000143658 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 Red fox MODERN SPECIES ENSVVUG00000013847 RASL12 (ENSVVUG00000013838) SLC51B (ENSVVUG00000013831) MTFMT (ENSVVUG00000013827) SPG21 (ENSVVUG00000013822) ANKDD1A (ENSVVUG00000013820) PLEKHO2 (ENSVVUG00000013810) ENSVVUG00000013805 RBPMS2 (ENSVVUG00000013801) ENSVVUG00000013799 ZNF609 (ENSVVUG00000013796) TRIP4 (ENSVVUG00000013776) PCLAF (ENSVVUG00000013774) ENSVVUG00000013767 CSNK1G1 (ENSVVUG00000013708) #21 PPIB (ENSVVUG00000013694) #22 SNX22 (ENSVVUG00000013682) #23 SNX1 (ENSVVUG00000013655) #24 ENSVVUG00000013649 CIAO2A (ENSVVUG00000013643) #25 DAPK2 (ENSVVUG00000013611) HERC1 (ENSVVUG00000012408) FBXL22 (ENSVVUG00000012296) ENSVVUG00000011501 ENSVVUG00000011447 CA12 (ENSVVUG00000011399) APH1B (ENSVVUG00000011390) ENSVVUG00000011389 RAB8B (ENSVVUG00000011367) ENSVVUG00000011320 LACTB (ENSVVUG00000011297) Canis_lupus ANCESTRAL SPECIES 17 ENSGT00940000161629 ENSGT00940000160167.q ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00390000003248.a.a.a.b ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT00950000184921.b Dingo MODERN SPECIES 205 KBTBD13 (ENSCAFG00020008818) ENSCAFG00020008821 SLC51B (ENSCAFG00020008823) MTFMT (ENSCAFG00020008826) SPG21 (ENSCAFG00020008856) ANKDD1A (ENSCAFG00020008860) PLEKHO2 (ENSCAFG00020008874) PIF1 (ENSCAFG00020008886) ENSCAFG00020008906 RBPMS2 (ENSCAFG00020008908) OAZ2 (ENSCAFG00020008922) ZNF609 (ENSCAFG00020008938) TRIP4 (ENSCAFG00020008960) ENSCAFG00020008966 CSNK1G1 (ENSCAFG00020009012) #21 PPIB (ENSCAFG00020009317) #22 SNX22 (ENSCAFG00020009320) #23 SNX1 (ENSCAFG00020009326) #24 CIAO2A (ENSCAFG00020009343) #25 DAPK2 (ENSCAFG00020009392) ENSCAFG00020009407 ENSCAFG00020009410 FBXL22 (ENSCAFG00020009419) USP3 (ENSCAFG00020009426) CA12 (ENSCAFG00020009454) APH1B (ENSCAFG00020009470) RAB8B (ENSCAFG00020009474) ENSCAFG00020009482 ENSCAFG00020009484 LACTB (ENSCAFG00020009493) TPM1 (ENSCAFG00020009521) Dog DUPLICATION Dog MODERN SPECIES 23 PDCD7 (ENSCAFG00845024725) KBTBD13 (ENSCAFG00845024657) SLC51B (ENSCAFG00845024623) MTFMT (ENSCAFG00845024367) SPG21 (ENSCAFG00845024150) ANKDD1A (ENSCAFG00845023984) PLEKHO2 (ENSCAFG00845023843) PIF1 (ENSCAFG00845023739) ENSCAFG00845023679 RBPMS2 (ENSCAFG00845023573) OAZ2 (ENSCAFG00845023459) ZNF609 (ENSCAFG00845023283) TRIP4 (ENSCAFG00845023208) PCLAF (ENSCAFG00845023122) CSNK1G1 (ENSCAFG00845022773) #21 PPIB (ENSCAFG00845022646) #22 ENSCAFG00845022581 #23 SNX1 (ENSCAFG00845022186) #24 CIAO2A (ENSCAFG00845022079) #25 DAPK2 (ENSCAFG00845021918) HERC1 (ENSCAFG00845021555) FBXL22 (ENSCAFG00845021485) USP3 (ENSCAFG00845021124) CA12 (ENSCAFG00845020844) APH1B (ENSCAFG00845020653) RAB8B (ENSCAFG00845020576) RPS27L (ENSCAFG00845020453) LACTB (ENSCAFG00845020386) TPM1 (ENSCAFG00845019944) TLN2 (ENSCAFG00845019529) ENSCAFG00845019202 Dog MODERN SPECIES 37 HOXB9 (ENSCAFG00845009956) HOXB8 (ENSCAFG00845009931) HOXB7 (ENSCAFG00845009899) HOXB6 (ENSCAFG00845009871) HOXB5 (ENSCAFG00845009832) HOXB4 (ENSCAFG00845017264) HOXB3 (ENSCAFG00845017188) HOXB2 (ENSCAFG00845017142) HOXB1 (ENSCAFG00845017096) SKAP1 (ENSCAFG00845016959) SNX11 (ENSCAFG00845016720) CBX1 (ENSCAFG00845016596) NFE2L1 (ENSCAFG00845016388) COPZ2 (ENSCAFG00845016156) CDK5RAP3 (ENSCAFG00845016051) ENSCAFG00845016000 #22 PRR15L (ENSCAFG00845015978) PNPO (ENSCAFG00845015876) SP2 (ENSCAFG00845015786) SP6 (ENSCAFG00845015746) SCRN2 (ENSCAFG00845015686) LRRC46 (ENSCAFG00845015603) MRPL10 (ENSCAFG00845015539) OSBPL7 (ENSCAFG00845015415) TBX21 (ENSCAFG00845015330) TBKBP1 (ENSCAFG00845015281) KPNB1 (ENSCAFG00845015226) NPEPPS (ENSCAFG00845014931) ENSCAFG00845014840 GPR179 (ENSCAFG00845014777) SOCS7 (ENSCAFG00845014686) Atlantogenata ANCESTRAL SPECIES 2 ENSGT00390000008092.b ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 Xenarthra ANCESTRAL SPECIES 197 ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 Armadillo MODERN SPECIES 2336 PLEKHO2 (ENSDNOG00000034684) PIF1 (ENSDNOG00000003780) RBPMS2 (ENSDNOG00000048895) OAZ2 (ENSDNOG00000037947) ZNF609 (ENSDNOG00000040739) ENSDNOG00000030638 ENSDNOG00000038952 TRIP4 (ENSDNOG00000008654) PCLAF (ENSDNOG00000041418) ENSDNOG00000018857 #21 ENSDNOG00000031206 #22 SNX22 (ENSDNOG00000017270) #23 SNX1 (ENSDNOG00000019013) #24 CIAO2A (ENSDNOG00000025148) #25 DAPK2 (ENSDNOG00000036558) ENSDNOG00000015233 HERC1 (ENSDNOG00000005556) FBXL22 (ENSDNOG00000005549) USP3 (ENSDNOG00000005529) CA12 (ENSDNOG00000043949) Afrotheria ANCESTRAL SPECIES 58 ENSGT00390000017392 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 Tenrec MODERN SPECIES 4974 ENSETEG00000012672 #21 PPIB (ENSETEG00000012671) #22 SNX22 (ENSETEG00000012667) #23 Afrotheria_a ANCESTRAL SPECIES 56 ENSGT00390000017392 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 Elephant MODERN SPECIES 466 PDCD7 (ENSLAFG00000004977) KBTBD13 (ENSLAFG00000031048) RASL12 (ENSLAFG00000006982) SLC51B (ENSLAFG00000030011) MTFMT (ENSLAFG00000006985) SPG21 (ENSLAFG00000002639) ANKDD1A (ENSLAFG00000002637) PLEKHO2 (ENSLAFG00000001775) PIF1 (ENSLAFG00000023289) RBPMS2 (ENSLAFG00000018725) OAZ2 (ENSLAFG00000001466) ZNF609 (ENSLAFG00000001465) TRIP4 (ENSLAFG00000017612) PCLAF (ENSLAFG00000017606) CSNK1G1 (ENSLAFG00000018699) #21 PPIB (ENSLAFG00000018698) #22 SNX22 (ENSLAFG00000018696) #23 SNX1 (ENSLAFG00000018693) #24 CIAO2A (ENSLAFG00000011114) #25 DAPK2 (ENSLAFG00000000338) HERC1 (ENSLAFG00000004068) FBXL22 (ENSLAFG00000031273) USP3 (ENSLAFG00000004065) CA12 (ENSLAFG00000001773) APH1B (ENSLAFG00000001772) RAB8B (ENSLAFG00000001771) RPS27L (ENSLAFG00000015475) LACTB (ENSLAFG00000015480) TPM1 (ENSLAFG00000004960) TLN2 (ENSLAFG00000000520) ENSLAFG00000013413 Hyrax MODERN SPECIES 5048 CSNK1G1 (ENSPCAG00000012341) #21 PPIB (ENSPCAG00000012288) #22 SNX22 (ENSPCAG00000012209) #23 SNX1 (ENSPCAG00000012062) #24 CIAO2A (ENSPCAG00000012020) #25 Marsupialia ANCESTRAL SPECIES ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00390000007209.l ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Opossum MODERN SPECIES UBAP1L (ENSMODG00000029751) RASL12 (ENSMODG00000038689) ENSMODG00000048415 MTFMT (ENSMODG00000010418) SPG21 (ENSMODG00000010438) ANKDD1A (ENSMODG00000010452) ENSMODG00000010455 PLEKHO2 (ENSMODG00000010466) PIF1 (ENSMODG00000010476) ENSMODG00000010487 OAZ2 (ENSMODG00000010496) ZNF609 (ENSMODG00000010510) TRIP4 (ENSMODG00000010743) PCLAF (ENSMODG00000037309) CSNK1G1 (ENSMODG00000010802) #21 PPIB (ENSMODG00000010819) #22 SNX22 (ENSMODG00000010831) #23 SNX1 (ENSMODG00000010898) #24 CIAO2A (ENSMODG00000010909) #25 DAPK2 (ENSMODG00000010926) HERC1 (ENSMODG00000010971) FBXL22 (ENSMODG00000046180) USP3 (ENSMODG00000011011) CA12 (ENSMODG00000011032) APH1B (ENSMODG00000038735) RAB8B (ENSMODG00000011048) ENSMODG00000011078 RPS27L (ENSMODG00000042701) LACTB (ENSMODG00000011098) TPM1 (ENSMODG00000039857) TLN2 (ENSMODG00000011273) Marsupialia_b ANCESTRAL SPECIES ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00390000007209.l ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 Diprotodontia ANCESTRAL SPECIES ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00390000007209.l ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00940000161629 ENSGT00940000160167 ENSGT00390000010409 ENSGT00390000017828 ENSGT00390000007857 ENSGT00940000154170.B ENSGT00390000007209.l ENSGT00530000063760.a ENSGT00530000063561 ENSGT00940000158086 ENSGT00940000157725 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252.a.a.a ENSGT00940000155628 #21 ENSGT00940000158007 #22 ENSGT00390000001280.a #23 ENSGT00940000155889 #24 ENSGT00390000017697.a #25 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 ENSGT00940000162206 koala MODERN SPECIES RASL12 (ENSPCIG00000035910) ENSPCIG00000024118 MTFMT (ENSPCIG00000024121) SPG21 (ENSPCIG00000024124) ANKDD1A (ENSPCIG00000032384) ENSPCIG00000029444 PLEKHO2 (ENSPCIG00000029445) PIF1 (ENSPCIG00000029446) RBPMS2 (ENSPCIG00000029447) OAZ2 (ENSPCIG00000029448) ZNF609 (ENSPCIG00000029449) TRIP4 (ENSPCIG00000029450) ENSPCIG00000029451 CSNK1G1 (ENSPCIG00000030780) #21 ENSPCIG00000029452 PPIB (ENSPCIG00000021286) #22 SNX22 (ENSPCIG00000021287) #23 SNX1 (ENSPCIG00000029454) #24 ENSPCIG00000029455 #25 DAPK2 (ENSPCIG00000029457) HERC1 (ENSPCIG00000033481) FBXL22 (ENSPCIG00000003757) USP3 (ENSPCIG00000003759) Common wonbat MODERN SPECIES 581 KBTBD13 (ENSVURG00010016711) RASL12 (ENSVURG00010016692) MTFMT (ENSVURG00010016671) SPG21 (ENSVURG00010016616) ANKDD1A (ENSVURG00010016514) ENSVURG00010016494 PLEKHO2 (ENSVURG00010016489) PIF1 (ENSVURG00010016477) RBPMS2 (ENSVURG00010016465) OAZ2 (ENSVURG00010016452) ZNF609 (ENSVURG00010016444) TRIP4 (ENSVURG00010016411) ENSVURG00010016398 ENSVURG00010016389 ENSVURG00010016372 #21 PPIB (ENSVURG00010016362) #22 ENSVURG00010016350 #23 SNX1 (ENSVURG00010016300) #24 CIAO2A (ENSVURG00010016275) #25 DAPK2 (ENSVURG00010016252) HERC1 (ENSVURG00010016220) FBXL22 (ENSVURG00010016203) USP3 (ENSVURG00010016157) CA12 (ENSVURG00010016134) APH1B (ENSVURG00010016112) RAB8B (ENSVURG00010016099) ENSVURG00010016082 LACTB (ENSVURG00010016066) TPM1 (ENSVURG00010015990) TLN2 (ENSVURG00010015950) ENSVURG00010015922 Wallaby MODERN SPECIES 6281 ENSMEUG00000002990 #21 PPIB (ENSMEUG00000002985) #22 SNX22 (ENSMEUG00000002981) #23 Tasmanian devil MODERN SPECIES 1 KBTBD13 (ENSSHAG00000031944) RASL12 (ENSSHAG00000010405) ENSSHAG00000010231 SPG21 (ENSSHAG00000009982) MTFMT (ENSSHAG00000012265) ANKDD1A (ENSSHAG00000009607) ENSSHAG00000009145 PLEKHO2 (ENSSHAG00000030172) PIF1 (ENSSHAG00000008322) RBPMS2 (ENSSHAG00000031923) OAZ2 (ENSSHAG00000025120) ZNF609 (ENSSHAG00000004069) TRIP4 (ENSSHAG00000000040) PCLAF (ENSSHAG00000030585) CSNK1G1 (ENSSHAG00000018581) #21 PPIB (ENSSHAG00000024480) #22 SNX22 (ENSSHAG00000018564) #23 SNX1 (ENSSHAG00000018508) #24 CIAO2A (ENSSHAG00000023450) #25 DAPK2 (ENSSHAG00000018240) HERC1 (ENSSHAG00000017933) FBXL22 (ENSSHAG00000020700) USP3 (ENSSHAG00000023305) ENSSHAG00000022554 CA12 (ENSSHAG00000017499) APH1B (ENSSHAG00000029286) RAB8B (ENSSHAG00000024710) ENSSHAG00000022073 LACTB (ENSSHAG00000017142) TPM1 (ENSSHAG00000020913) TLN2 (ENSSHAG00000015834)