Murinae	ANCESTRAL SPECIES	3	ENSGT00390000008092.b #7	ENSGT00940000161629 #8	ENSGT00940000160167 #9	ENSGT00390000010409 #10	ENSGT00390000017828 #11	ENSGT00390000007857 #12	ENSGT00940000154170.B #13	ENSGT00530000063760.a #14	ENSGT00530000063561 #15	ENSGT00940000158086 #16	ENSGT00940000157725 #17	ENSGT00390000008748.b #18	ENSGT00390000005300 #19	ENSGT00510000048252 #20	ENSGT00940000155628 #21	ENSGT00940000158007 #22	ENSGT00390000001280.a #23	ENSGT00940000155889 #24	ENSGT00390000017697.a #25	ENSGT00940000153424.a.a.d ##26	ENSGT00940000153424.a.a.c.b #26	ENSGT00940000155907.b #27	ENSGT00390000003748 #28	ENSGT00940000157850 #29	ENSGT00940000159282 #30	ENSGT00390000002049.c.b #33	ENSGT00940000155363 #34	ENSGT00950000182891.a.a.a	ENSGT00390000001062 #35	ENSGT01030000234542.b.a.a.b.a.a #36	ENSGT00940000154699 #37
Mus	ANCESTRAL SPECIES	4	ENSGT00390000008092.b #7	ENSGT00940000161629 #8	ENSGT00940000160167 #9	ENSGT00390000010409 #10	ENSGT00390000017828 #11	ENSGT00390000007857 #12	ENSGT00940000154170.B #13	ENSGT00530000063760.a #14	ENSGT00530000063561 #15	ENSGT00940000158086 #16	ENSGT00940000157725 #17	ENSGT00390000008748.b #18	ENSGT00390000005300 #19	ENSGT00510000048252 #20	ENSGT00940000155628 #21	ENSGT00940000158007 #22	ENSGT00390000001280.a #23	ENSGT00940000155889 #24	ENSGT00390000017697.a #25	ENSGT00940000153424.a.a.c.b #26	ENSGT00940000155907.b #27	ENSGT00390000003748 #28	ENSGT00940000157850 #29	ENSGT00940000159282 #30	ENSGT00390000002049.c.b.u.a #31	ENSGT00390000002049.c.b.u.b #33	ENSGT00940000155363 #34	ENSGT00950000182891.a.a.a	ENSGT00390000001062 #35	ENSGT01030000234542.b.a.a.b.a.a #36	ENSGT00940000154699 #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000008092.b #7	ENSGT00940000161629 #8	ENSGT00940000160167 #9	ENSGT00390000010409 #10	ENSGT00390000017828 #11	ENSGT00390000007857 #12	ENSGT00940000154170.B #13	ENSGT00530000063760.a #14	ENSGT00530000063561 #15	ENSGT00940000158086 #16	ENSGT00940000157725 #17	ENSGT00390000008748.b #18	ENSGT00390000005300 #19	ENSGT00510000048252 #20	ENSGT00940000155628 #21	ENSGT00940000158007 #22	ENSGT00390000001280.a #23	ENSGT00940000155889 #24	ENSGT00390000017697.a #25	ENSGT00940000153424.a.a.c.b #26	ENSGT00940000155907.b #27	ENSGT00390000003748 #28	ENSGT00940000157850 #29	ENSGT00940000159282 #30	ENSGT00390000002049.c.b.u.a #31	ENSGT00390000002049.c.b.u.b #33	ENSGT00940000155363 #34	ENSGT00950000182891.a.a.a	ENSGT00390000001062 #35	ENSGT01030000234542.b.a.a.b.a.a #36	ENSGT00940000154699 #37
Ryukyu mouse	MODERN SPECIES	18	Ubap1l (MGP_CAROLIEiJ_G0032358) #7	Kbtbd13 (MGP_CAROLIEiJ_G0032359) #8	Rasl12 (MGP_CAROLIEiJ_G0032360) #9	Slc51b (MGP_CAROLIEiJ_G0032361) #10	Mtfmt (MGP_CAROLIEiJ_G0032362) #11	Spg21 (MGP_CAROLIEiJ_G0032363) #12	Ankdd1a (MGP_CAROLIEiJ_G0032364) #13	Plekho2 (MGP_CAROLIEiJ_G0032365) #14	Pif1 (MGP_CAROLIEiJ_G0032366) #15	Rbpms2 (MGP_CAROLIEiJ_G0032367) #16	MGP_CAROLIEiJ_G0032368 #17	Zfp609 (MGP_CAROLIEiJ_G0032369) #18	Trip4 (MGP_CAROLIEiJ_G0032370) #19	Pclaf (MGP_CAROLIEiJ_G0032371) #20	Csnk1g1 (MGP_CAROLIEiJ_G0032372) #21	Ppib (MGP_CAROLIEiJ_G0032373) #22	Snx22 (MGP_CAROLIEiJ_G0032374) #23	Snx1 (MGP_CAROLIEiJ_G0032375) #24	Ciao2a (MGP_CAROLIEiJ_G0032376) #25	MGP_CAROLIEiJ_G0032377 #26	Herc1 (MGP_CAROLIEiJ_G0032378) #27	Fbxl22 (MGP_CAROLIEiJ_G0032379) #28	Usp3 (MGP_CAROLIEiJ_G0032380) #29	Car12 (MGP_CAROLIEiJ_G0032381) #30	Aph1b (MGP_CAROLIEiJ_G0032382) #31	MGP_CAROLIEiJ_G0032383 #32	MGP_CAROLIEiJ_G0032384 #33	Rab8b (MGP_CAROLIEiJ_G0032385) #34	Lactb (MGP_CAROLIEiJ_G0032387) #35	Tpm1 (MGP_CAROLIEiJ_G0032388) #36	Tln2 (MGP_CAROLIEiJ_G0032389) #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000008092.b #7	ENSGT00940000161629 #8	ENSGT00940000160167 #9	ENSGT00390000010409 #10	ENSGT00390000017828.s #11	ENSGT00390000007857 #12	ENSGT00940000154170.B #13	ENSGT00530000063760.a #14	ENSGT00530000063561 #15	ENSGT00940000158086 #16	ENSGT00940000157725 #17	ENSGT00390000008748.b #18	ENSGT00390000005300 #19	ENSGT00510000048252.m #20	ENSGT00940000155628 #21	ENSGT00940000158007 #22	ENSGT00390000001280.a #23	ENSGT00940000155889 #24	ENSGT00390000017697.a #25	ENSGT00940000153424.a.a.d ##26	ENSGT00940000153424.a.a.c.b #26	ENSGT00940000155907.b #27	ENSGT00390000003748 #28	ENSGT00940000157850 #29	ENSGT00940000159282 #30	ENSGT00390000002049.c.b.u.a #31	ENSGT00390000002049.c.b.u.b #33	ENSGT00940000155363 #34	ENSGT00950000182891.a.a.a	ENSGT00390000001062 #35	ENSGT01030000234542.b.a.a.b.a.a #36
Mouse	MODERN SPECIES	18	Ubap1l (ENSMUSG00000086228) #7	Kbtbd13 (ENSMUSG00000054978) #8	Rasl12 (ENSMUSG00000041696) #9	Slc51b (ENSMUSG00000053862) #10	Mtfmt (ENSMUSG00000059183) #11	Spg21 (ENSMUSG00000032388) #12	Ankdd1a (ENSMUSG00000066510) #13	Plekho2 (ENSMUSG00000050721) #14	Pif1 (ENSMUSG00000041064) #15	Rbpms2 (ENSMUSG00000032387) #16	Oaz2 (ENSMUSG00000040652) #17	Zfp609 (ENSMUSG00000040524) #18	Trip4 (ENSMUSG00000032386) #19	Pclaf (ENSMUSG00000040204) #20	Csnk1g1 (ENSMUSG00000032384) #21	Ppib (ENSMUSG00000032383) #22	Snx22 (ENSMUSG00000039452) #23	Snx1 (ENSMUSG00000032382) #24	Ciao2a (ENSMUSG00000032381) #25	Dapk2 (ENSMUSG00000032380) ##26	Herc1 (ENSMUSG00000038664) #27	Fbxl22 (ENSMUSG00000050503) #28	Usp3 (ENSMUSG00000032376) #29	Car12 (ENSMUSG00000032373) #30	Aph1b (ENSMUSG00000032375) #31	Aph1c (ENSMUSG00000053040) #33	Rab8b (ENSMUSG00000036943) #34	Rps27l (ENSMUSG00000036781)	Lactb (ENSMUSG00000032370) #35	Tpm1 (ENSMUSG00000032366) #36	Tln2 (ENSMUSG00000052698) #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00390000008092.b #7	ENSGT00940000161629 #8	ENSGT00940000160167 #9	ENSGT00390000010409 #10	ENSGT00390000017828.s #11	ENSGT00390000007857 #12	ENSGT00940000154170.B #13	ENSGT00530000063760.a #14	ENSGT00530000063561 #15	ENSGT00940000158086 #16	ENSGT00940000157725 #17	ENSGT00390000008748.b #18	ENSGT00390000005300 #19	ENSGT00510000048252.m #20	ENSGT00940000155628 #21	ENSGT00940000158007 #22	ENSGT00390000001280.a #23	ENSGT00940000155889 #24	ENSGT00390000017697.a #25	ENSGT00940000153424.a.a.c.b #26	ENSGT00940000155907.b #27	ENSGT00390000003748 #28	ENSGT00940000157850 #29	ENSGT00940000159282 #30	ENSGT00390000002049.c.b.u.a #31	ENSGT00390000002049.c.b.u.b #33	ENSGT00940000155363 #34	ENSGT00950000182891.a.a.a	ENSGT00390000001062 #35	ENSGT01030000234542.b.a.a.b.a.a #36	ENSGT00940000154699 #37
spretus	MODERN SPECIES	18	Ubap1l (MGP_SPRETEiJ_G0033497) #7	Kbtbd13 (MGP_SPRETEiJ_G0033498) #8	Rasl12 (MGP_SPRETEiJ_G0033499) #9	Slc51b (MGP_SPRETEiJ_G0033500) #10	Mtfmt (MGP_SPRETEiJ_G0033501) #11	Spg21 (MGP_SPRETEiJ_G0033502) #12	Ankdd1a (MGP_SPRETEiJ_G0033503) #13	Plekho2 (MGP_SPRETEiJ_G0033504) #14	Pif1 (MGP_SPRETEiJ_G0033505) #15	Rbpms2 (MGP_SPRETEiJ_G0033506) #16	MGP_SPRETEiJ_G0033507 #17	Zfp609 (MGP_SPRETEiJ_G0033508) #18	Trip4 (MGP_SPRETEiJ_G0033509) #19	Pclaf (MGP_SPRETEiJ_G0033510) #20	Csnk1g1 (MGP_SPRETEiJ_G0033511) #21	Ppib (MGP_SPRETEiJ_G0033512) #22	Snx22 (MGP_SPRETEiJ_G0033513) #23	Snx1 (MGP_SPRETEiJ_G0033514) #24	Ciao2a (MGP_SPRETEiJ_G0033515) #25	MGP_SPRETEiJ_G0033516 #26	Herc1 (MGP_SPRETEiJ_G0033517) #27	Fbxl22 (MGP_SPRETEiJ_G0033518) #28	Usp3 (MGP_SPRETEiJ_G0033519) #29	Car12 (MGP_SPRETEiJ_G0033520) #30	Aph1b (MGP_SPRETEiJ_G0033521) #31	Aph1c (MGP_SPRETEiJ_G0033522) #33	Rab8b (MGP_SPRETEiJ_G0033523) #34	Rps27l (MGP_SPRETEiJ_G0033524)	Lactb (MGP_SPRETEiJ_G0033525) #35	Tpm1 (MGP_SPRETEiJ_G0033526) #36	Tln2 (MGP_SPRETEiJ_G0033527) #37
Steppe mouse	MODERN SPECIES	3365	ENSMSIG00000005605 #7	Kbtbd13 (ENSMSIG00000005647) #8	Rasl12 (ENSMSIG00000005656) #9	Slc51b (ENSMSIG00000005686) #10	Mtfmt (ENSMSIG00000005704) #11	Spg21 (ENSMSIG00000005730) #12	Ankdd1a (ENSMSIG00000005779) #13	Plekho2 (ENSMSIG00000005874) #14	Pif1 (ENSMSIG00000005899) #15	ENSMSIG00000005998 #16	Oaz2 (ENSMSIG00000006069) #17	Zfp609 (ENSMSIG00000006120) #18	Trip4 (ENSMSIG00000006163) #19	ENSMSIG00000006456 #20	Csnk1g1 (ENSMSIG00000006521) #21	Ppib (ENSMSIG00000007090) #22	Snx22 (ENSMSIG00000007110) #23	Snx1 (ENSMSIG00000007126) #24	Ciao2a (ENSMSIG00000007225) #25
Shrew mouse	MODERN SPECIES	1	Pdcd7 (MGP_PahariEiJ_G0015222)	Ubap1l (MGP_PahariEiJ_G0015223) #7	Kbtbd13 (MGP_PahariEiJ_G0015224) #8	Rasl12 (MGP_PahariEiJ_G0015225) #9	Slc51b (MGP_PahariEiJ_G0015226) #10	Mtfmt (MGP_PahariEiJ_G0015227) #11	Spg21 (MGP_PahariEiJ_G0015228) #12	Ankdd1a (MGP_PahariEiJ_G0015229) #13	Plekho2 (MGP_PahariEiJ_G0015230) #14	Pif1 (MGP_PahariEiJ_G0015231) #15	Rbpms2 (MGP_PahariEiJ_G0015232) #16	MGP_PahariEiJ_G0015233 #17	Zfp609 (MGP_PahariEiJ_G0015234) #18	Trip4 (MGP_PahariEiJ_G0015235) #19	Csnk1g1 (MGP_PahariEiJ_G0015237) #21	Ppib (MGP_PahariEiJ_G0015238) #22	Snx22 (MGP_PahariEiJ_G0015239) #23	Snx1 (MGP_PahariEiJ_G0015240) #24	Ciao2a (MGP_PahariEiJ_G0015241) #25	MGP_PahariEiJ_G0015242 #26	Herc1 (MGP_PahariEiJ_G0015243) #27	Fbxl22 (MGP_PahariEiJ_G0015244) #28	Usp3 (MGP_PahariEiJ_G0015245) #29	Car12 (MGP_PahariEiJ_G0015246) #30	Aph1b (MGP_PahariEiJ_G0015247) #31	MGP_PahariEiJ_G0015248 #33	Rab8b (MGP_PahariEiJ_G0015249) #34	MGP_PahariEiJ_G0015250	Lactb (MGP_PahariEiJ_G0015251) #35	MGP_PahariEiJ_G0015252 #36	Tln2 (MGP_PahariEiJ_G0015253) #37
Rat	MODERN SPECIES	18	Ubap1l (ENSRNOG00000050979) #7	AABR07070456.1 (ENSRNOG00000014383) #8	Rasl12 (ENSRNOG00000032339) #9	Slc51b (ENSRNOG00000028889) #10	Mtfmt (ENSRNOG00000014602) #11	Spg21 (ENSRNOG00000015019) #12	Ankdd1a (ENSRNOG00000015554) #13	Plekho2 (ENSRNOG00000029242) #14	Pif1 (ENSRNOG00000015878) #15	Rbpms2 (ENSRNOG00000015896) #16	Oaz2 (ENSRNOG00000015953) #17	Zfp609 (ENSRNOG00000015977) #18	Trip4 (ENSRNOG00000016121) #19	Pclaf (ENSRNOG00000067723)	Csnk1g1 (ENSRNOG00000016620) #21	Ppib (ENSRNOG00000016781) #22	Snx22 (ENSRNOG00000022852) #23	Snx1 (ENSRNOG00000017029) #24	Ciao2a (ENSRNOG00000017119) #25	Dapk2 (ENSRNOG00000017332) ##26	Herc1 (ENSRNOG00000051671) #27	Fbxl22 (ENSRNOG00000017684) #28	Usp3 (ENSRNOG00000017714) #29	Car12 (ENSRNOG00000017766) #30	LOC691658 (ENSRNOG00000063302) #33	LOC120094192 (ENSRNOG00000067077) #33	Aph1b (ENSRNOG00000027295) #33	Rab8b (ENSRNOG00000018009) #34	Rps27l (ENSRNOG00000050473)	Lactb (ENSRNOG00000018081) #35	Tpm1 (ENSRNOG00000018184) #36