Archelosauria ANCESTRAL SPECIES 4 ENSGT00940000168371 ENSGT00950000185620 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000153770.r.a.a.b.b.a.a ENSGT00940000153770.r.a.b ENSGT00940000153094 ENSGT00940000153770.r.a.a.a.b ENSGT00940000154869.b.b ENSGT00940000153770.r.a.a.b.b.a.b ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000015020 ENSGT00960000188573 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 Archosauria ANCESTRAL SPECIES 1 ENSGT00940000159532 #8 ENSGT00940000160135 #9 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00950000185620 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT01050000245143 ENSGT00940000159585 ENSGT00960000188573 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b Aves ANCESTRAL SPECIES 3 ENSGT00940000160135 #9 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00690000102286 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Neognathae ANCESTRAL SPECIES 5 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00690000102286.c.a.b ENSGT00610000087427 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Neognathae_b ANCESTRAL SPECIES 4 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00690000102286.c.a.b ENSGT00610000087427 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Passeriformes ANCESTRAL SPECIES 4 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00690000102286.c.a.b ENSGT00610000087427 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000161176 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT01000000216408 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00690000102286.c.a.b ENSGT00610000087427 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000161176 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT01000000216408 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00690000102286.c.a.b ENSGT00610000087427 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000161176 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT01000000216408 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Medium ground finch MODERN SPECIES 182 MRPL35 (ENSGFOG00000003093) #7 REEP1 (ENSGFOG00000003087) #8 KDM3A (ENSGFOG00000003058) #9 CHMP3 (ENSGFOG00000003029) #10 RNF103 (ENSGFOG00000003025) #11 RMND5A (ENSGFOG00000003019) #12 ENSGFOG00000002994 #13 ENSGFOG00000002792 #14 ENSGFOG00000002755 #15 SMYD1 (ENSGFOG00000002709) #16 FABP1 (ENSGFOG00000002697) #17 THNSL2 (ENSGFOG00000002681) #18 ENSGFOG00000002643 #19 EIF2AK3 (ENSGFOG00000002270) #20 RPIA (ENSGFOG00000002114) #21 SUCLG1 (ENSGFOG00000002009) #22 Passeroidea ANCESTRAL SPECIES 4 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00690000102286.c.a.b ENSGT00610000087427 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000161176 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160795 ENSGT00940000157511 ENSGT01100000264902 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT01000000216408 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b Zebra finch MODERN SPECIES 25 KDM3A (ENSTGUG00000010803) #9 CHMP3 (ENSTGUG00000010820) #10 RNF103 (ENSTGUG00000010834) #11 RMND5A (ENSTGUG00000010838) #12 CD8A (ENSTGUG00000010841) #13 ENSTGUG00000010847 #15 ENSTGUG00000027703 ENSTGUG00000029052 SMYD1 (ENSTGUG00000010851) #16 FABP1 (ENSTGUG00000010860) #17 THNSL2 (ENSTGUG00000010864) #18 FOXI2 (ENSTGUG00000010866) ENSTGUG00000021098 #19 EIF2AK3 (ENSTGUG00000010877) #20 RPIA (ENSTGUG00000010898) #21 SUCLG1 (ENSTGUG00000010904) #22 LRRTM1 (ENSTGUG00000010929) CTNNA2 (ENSTGUG00000010908) ADRA1D (ENSTGUG00000021977) SMOX (ENSTGUG00000010936) ENSTGUG00000021011 RNF24 (ENSTGUG00000025673) PANK2 (ENSTGUG00000010948) ENSTGUG00000010956 PTPRA (ENSTGUG00000010958) ENSTGUG00000024049 ENSTGUG00000010977 ENSTGUG00000010980 ENSTGUG00000029561 UBOX5 (ENSTGUG00000010984) LZTS3 (ENSTGUG00000025707) Common canary MODERN SPECIES 2 REEP1 (ENSSCAG00000014857) #8 KDM3A (ENSSCAG00000014840) #9 CHMP3 (ENSSCAG00000014828) #10 RNF103 (ENSSCAG00000014823) #11 RMND5A (ENSSCAG00000014814) #12 ENSSCAG00000014778 #13 ENSSCAG00000014760 #15 ENSSCAG00000014758 SMYD1 (ENSSCAG00000014754) #16 FABP1 (ENSSCAG00000014749) #17 THNSL2 (ENSSCAG00000014734) #18 FOXI2 (ENSSCAG00000014726) ENSSCAG00000014720 #19 EIF2AK3 (ENSSCAG00000014708) #20 RPIA (ENSSCAG00000014704) #21 SUCLG1 (ENSSCAG00000014699) #22 Flycatcher MODERN SPECIES 22 KDM3A (ENSFALG00000010109) #9 CHMP3 (ENSFALG00000010145) #10 RNF103 (ENSFALG00000010155) #11 RMND5A (ENSFALG00000010158) #12 CD8A (ENSFALG00000010165) #13 ENSFALG00000026719 #15 ENSFALG00000026255 ENSFALG00000014895 SMYD1 (ENSFALG00000026241) #16 FABP1 (ENSFALG00000025179) #17 THNSL2 (ENSFALG00000010197) #18 ENSFALG00000023438 ENSFALG00000024166 #19 EIF2AK3 (ENSFALG00000010207) #20 RPIA (ENSFALG00000010214) #21 SUCLG1 (ENSFALG00000010226) #22 ENSFALG00000000159 LRRTM1 (ENSFALG00000014217) ENSFALG00000000165 ADRA1D (ENSFALG00000023284) SMOX (ENSFALG00000000170) RNF24 (ENSFALG00000026513) ENSFALG00000000184 MAVS (ENSFALG00000024331) ENSFALG00000000197 ENSFALG00000027129 ENSFALG00000000213 ENSFALG00000025636 ENSFALG00000000220 UBOX5 (ENSFALG00000006574) FASTKD5 (ENSFALG00000006577) Great tit MODERN SPECIES 23 CHMP3 (ENSPMJG00000016793) #10 RNF103 (ENSPMJG00000016794) #11 RMND5A (ENSPMJG00000016795) #12 ENSPMJG00000016796 ENSPMJG00000016797 #13 ENSPMJG00000016798 #15 ENSPMJG00000016800 ENSPMJG00000016801 SMYD1 (ENSPMJG00000016803) #16 FABP1 (ENSPMJG00000016806) #17 THNSL2 (ENSPMJG00000016807) #18 FOXI2 (ENSPMJG00000016808) ENSPMJG00000016810 #19 EIF2AK3 (ENSPMJG00000016811) #20 RPIA (ENSPMJG00000016812) #21 SUCLG1 (ENSPMJG00000016813) #22 ENSPMJG00000016817 LRRTM1 (ENSPMJG00000017363) CTNNA2 (ENSPMJG00000017364) ADRA1D (ENSPMJG00000017365) SMOX (ENSPMJG00000017366) RNF24 (ENSPMJG00000017373) PANK2 (ENSPMJG00000017376) PTPRA (ENSPMJG00000017397) ENSPMJG00000018540 ENSPMJG00000018541 ENSPMJG00000018542 ENSPMJG00000018543 UBOX5 (ENSPMJG00000018544) FASTKD5 (ENSPMJG00000018545) LZTS3 (ENSPMJG00000018546) Neognathae_c ANCESTRAL SPECIES 3 ENSGT00940000159532 #8 ENSGT00940000160135 #9 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00610000087427 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT01050000245143 ENSGT00940000159585 ENSGT01000000216731 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b Kakapo MODERN SPECIES 24 CHMP3 (ENSSHBG00005020574) #10 RNF103 (ENSSHBG00005020572) #11 RMND5A (ENSSHBG00005020571) #12 ENSSHBG00005020569 #13 ENSSHBG00005020565 #15 ENSSHBG00005020563 ENSSHBG00005020561 ENSSHBG00005020558 SMYD1 (ENSSHBG00005020549) #16 FABP1 (ENSSHBG00005020543) #17 THNSL2 (ENSSHBG00005020540) #18 ENSSHBG00005020538 ENSSHBG00005020537 #19 EIF2AK3 (ENSSHBG00005020533) #20 RPIA (ENSSHBG00005020528) #21 SUCLG1 (ENSSHBG00005020524) #22 ENSSHBG00005020477 LRRTM1 (ENSSHBG00005020452) CTNNA2 (ENSSHBG00005020441) ADRA1D (ENSSHBG00005020434) SMOX (ENSSHBG00005020429) RNF24 (ENSSHBG00005020422) PANK2 (ENSSHBG00005020417) ENSSHBG00005020409 PTPRA (ENSSHBG00005020398) ENSSHBG00005020390 MRPS26 (ENSSHBG00005020387) ENSSHBG00005020382 ENSSHBG00005020379 UBOX5 (ENSSHBG00005020370) LZTS3 (ENSSHBG00005020359) Golden eagle MODERN SPECIES ENSACCG00020000079 CHMP3 (ENSACCG00020000078) #10 RNF103 (ENSACCG00020000077) #11 RMND5A (ENSACCG00020000076) #12 CD8A (ENSACCG00020000075) #13 ENSACCG00020000074 #15 ENSACCG00020000073 ENSACCG00020000072 SMYD1 (ENSACCG00020000071) #16 FABP1 (ENSACCG00020000070) #17 THNSL2 (ENSACCG00020000069) #18 ENSACCG00020000068 ENSACCG00020000066 #19 EIF2AK3 (ENSACCG00020000065) #20 RPIA (ENSACCG00020000064) #21 SUCLG1 (ENSACCG00020000063) #22 ENSACCG00020000062 ENSACCG00020000061 LRRTM1 (ENSACCG00020000060) ENSACCG00020000059 ADRA1D (ENSACCG00020000058) SMOX (ENSACCG00020000057) ENSACCG00020000056 RNF24 (ENSACCG00020000055) PANK2 (ENSACCG00020000054) ENSACCG00020000053 PTPRA (ENSACCG00020000052) ENSACCG00020000051 ENSACCG00020000050 MRPS26 (ENSACCG00020000049) ENSACCG00020000048 Galloanserae ANCESTRAL SPECIES 5 ENSGT00940000160135 #9 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00610000087427 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Phasianidae ANCESTRAL SPECIES 2 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588.e #13 ENSGT00940000156588.f.a.b.b.b.a #13 ENSGT00510000048998 #15 ENSGT00960000189673 ENSGT00610000087427 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000161176 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b.e Phasianidae_b ANCESTRAL SPECIES 4 ENSGT00950000185665 ENSGT00940000153203.A.b #12 ENSGT00940000156588.e #13 ENSGT00940000156588.f.a.b.b.b.a #13 ENSGT00510000048998 #15 ENSGT00960000189673 ENSGT00610000087427 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000161176 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b.e ENSGT00390000017193 Turkey MODERN SPECIES 24 ENSMGAG00000013229 ENSMGAG00000013230 UBOX5 (ENSMGAG00000013233) ENSMGAG00000015767 ENSMGAG00000013206 ENSMGAG00000013226 ENSMGAG00000013224 ENSMGAG00000013220 ENSMGAG00000013217 ENSMGAG00000013204 ENSMGAG00000022655 ENSMGAG00000013202 ENSMGAG00000015764 ENSMGAG00000021024 ENSMGAG00000021937 SUCLG1 (ENSMGAG00000013195) #22 ENSMGAG00000013193 #21 ENSMGAG00000013186 #19 ENSMGAG00000013189 #20 ENSMGAG00000013179 #18 ENSMGAG00000013173 #17 ENSMGAG00000013166 #16 ENSMGAG00000019131 #15 ENSMGAG00000022117 ENSMGAG00000017653 ENSMGAG00000022970 #13 ENSMGAG00000018735 #13 ENSMGAG00000013158 #12 RNF103 (ENSMGAG00000013155) #11 KDM3A (ENSMGAG00000013141) #9 ENSMGAG00000013154 #10 Chicken MODERN SPECIES 33 ENSGALG00010019182 #13 ENSGALG00010016950 #13 ENSGALG00010017353 #13 ENSGALG00010017330 #13 CD8BP (ENSGALG00010017365) #15 ENSGALG00010017386 ENSGALG00010017378 ENSGALG00010017389 SMYD1 (ENSGALG00010016131) #16 FABP1 (ENSGALG00010016147) #17 THNSL2 (ENSGALG00010016190) #18 ENSGALG00010016805 ENSGALG00010016813 #19 EIF2AK3 (ENSGALG00010016820) #20 RPIA (ENSGALG00010016859) #21 SUCLG1 (ENSGALG00010016878) #22 ENSGALG00010016891 CTNNA2 (ENSGALG00010016779) LRRTM1 (ENSGALG00010016791) ENSGALG00010018537 ADRA1D (ENSGALG00010016428) SMOX (ENSGALG00010016457) RNF24 (ENSGALG00010016462) PANK2 (ENSGALG00010016464) MAVS (ENSGALG00010016469) PTPRA (ENSGALG00010016549) MRPS26 (ENSGALG00010016576) OXT (ENSGALG00010016585) AVP (ENSGALG00010016587) UBOX5 (ENSGALG00010017865) FASTKD5 (ENSGALG00010017856) Japanese quail MODERN SPECIES 22 ENSCJPG00005006243 #13 ENSCJPG00005006253 #13 ENSCJPG00005006256 ENSCJPG00005006260 #13 ENSCJPG00005006263 #15 ENSCJPG00005006267 ENSCJPG00005006269 ENSCJPG00005006274 SMYD1 (ENSCJPG00005006370) #16 FABP1 (ENSCJPG00005006651) #17 THNSL2 (ENSCJPG00005006741) #18 FOXI2 (ENSCJPG00005006746) ENSCJPG00005006748 #19 EIF2AK3 (ENSCJPG00005006750) #20 RPIA (ENSCJPG00005006756) #21 SUCLG1 (ENSCJPG00005006765) #22 CTNNA2 (ENSCJPG00005006785) LRRTM1 (ENSCJPG00005006792) ADRA1D (ENSCJPG00005006860) SMOX (ENSCJPG00005006863) RNF24 (ENSCJPG00005006868) PANK2 (ENSCJPG00005006894) ENSCJPG00005006896 PTPRA (ENSCJPG00005006905) MRPS26 (ENSCJPG00005007569) ENSCJPG00005007570 ENSCJPG00005007573 UBOX5 (ENSCJPG00005007575) LZTS3 (ENSCJPG00005007579) DDRGK1 (ENSCJPG00005007581) ENSCJPG00005007602 Anatidae ANCESTRAL SPECIES 2 ENSGT00940000159532 #8 ENSGT00940000160135 #9 ENSGT00950000182832.C #10 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00510000048998 #15 ENSGT00940000160750.a.b.a ENSGT00610000087427 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT00940000154078.b ENSGT00940000169304 ENSGT01010000222287.B.a.a.b Pink-footed goose MODERN SPECIES 7 KDM3A (ENSABRG00000012928) #9 CHMP3 (ENSABRG00000013460) #10 RNF103 (ENSABRG00000013467) #11 RMND5A (ENSABRG00000013477) #12 ENSABRG00000013569 #13 ENSABRG00000013572 #15 ENSABRG00000013574 ENSABRG00000013579 SMYD1 (ENSABRG00000013587) #16 FABP1 (ENSABRG00000013595) #17 THNSL2 (ENSABRG00000013597) #18 FOXI2 (ENSABRG00000013606) ENSABRG00000013608 #19 EIF2AK3 (ENSABRG00000013612) #20 RPIA (ENSABRG00000013632) #21 SUCLG1 (ENSABRG00000013643) #22 ENSABRG00000013837 LRRTM1 (ENSABRG00000014922) CTNNA2 (ENSABRG00000014927) ADRA1D (ENSABRG00000014961) SMOX (ENSABRG00000014963) RNF24 (ENSABRG00000014967) PANK2 (ENSABRG00000014973) ENSABRG00000014984 PTPRA (ENSABRG00000015005) ENSABRG00000015014 ENSABRG00000015016 ENSABRG00000015017 UBOX5 (ENSABRG00000015026) LZTS3 (ENSABRG00000015027) ENSABRG00000015028 Duck MODERN SPECIES 22 KDM3A (ENSAPLG00000004274) #9 CHMP3 (ENSAPLG00000001090) #10 ENSAPLG00000028865 RNF103 (ENSAPLG00000002107) #11 RMND5A (ENSAPLG00000002419) #12 ENSAPLG00000002745 #15 ENSAPLG00000027278 ENSAPLG00000025247 ENSAPLG00000002674 SMYD1 (ENSAPLG00000002116) #16 FABP1 (ENSAPLG00000001196) #17 THNSL2 (ENSAPLG00000000600) #18 ENSAPLG00000015911 #19 EIF2AK3 (ENSAPLG00000015496) #20 RPIA (ENSAPLG00000015356) #21 SUCLG1 (ENSAPLG00000015246) #22 ENSAPLG00000002947 LRRTM1 (ENSAPLG00000003122) ENSAPLG00000003125 ENSAPLG00000017788 ZDHHC2 (ENSAPLG00000011779) CNOT7 (ENSAPLG00000011340) VPS37A (ENSAPLG00000010973) MTMR7 (ENSAPLG00000010246) SLC7A2 (ENSAPLG00000010063) PDGFRL (ENSAPLG00000009881) ENSAPLG00000028609 MTUS1 (ENSAPLG00000009766) FGL1 (ENSAPLG00000009401) PCM1 (ENSAPLG00000008474) ENSAPLG00000008425 African ostrich MODERN SPECIES 1016 KDM3A (ENSSCUG00000015389) #9 CHMP3 (ENSSCUG00000015384) #10 RNF103 (ENSSCUG00000015380) #11 RMND5A (ENSSCUG00000015375) #12 CD8A (ENSSCUG00000015372) #13 ENSSCUG00000015370 #15 ENSSCUG00000015368 ENSSCUG00000015364 SMYD1 (ENSSCUG00000015360) #16 FABP1 (ENSSCUG00000015358) #17 THNSL2 (ENSSCUG00000015353) #18 ENSSCUG00000015346 ENSSCUG00000015334 #19 EIF2AK3 (ENSSCUG00000015312) #20 RPIA (ENSSCUG00000015283) #21 SUCLG1 (ENSSCUG00000015272) #22 Australian saltwater crocodile MODERN SPECIES 65 REEP1 (ENSCPRG00005000543) #8 KDM3A (ENSCPRG00005000515) #9 CHMP3 (ENSCPRG00005000508) #10 RNF103 (ENSCPRG00005000502) #11 RMND5A (ENSCPRG00005000495) #12 ENSCPRG00005000438 #13 ENSCPRG00005000430 ZMAT1 (ENSCPRG00005000424) SMYD1 (ENSCPRG00005000368) #16 FABP1 (ENSCPRG00005000355) #17 ENSCPRG00005000350 #18 ENSCPRG00005000344 #18 ENSCPRG00005000283 #19 EIF2AK3 (ENSCPRG00005000213) #20 RPIA (ENSCPRG00005000166) #21 SUCLG1 (ENSCPRG00005000136) #22 ENSCPRG00005018859 ENSCPRG00005018855 LRRTM1 (ENSCPRG00005018854) ENSCPRG00005018852 ENSCPRG00005018849 ADRA1D (ENSCPRG00005018848) SMOX (ENSCPRG00005018846) RNF24 (ENSCPRG00005018844) PANK2 (ENSCPRG00005018839) ENSCPRG00005018838 PTPRA (ENSCPRG00005018837) ENSCPRG00005018833 MRPS26 (ENSCPRG00005018832) ENSCPRG00005018831 ENSCPRG00005018830 Cryptodira ANCESTRAL SPECIES 2 ENSGT00940000153770.s.a.b ENSGT00940000153094.a.b.a.b ENSGT00940000153770.r.a.a.a.b.a.a ENSGT00940000154869.b.b.e.a.a.a ENSGT00940000153770.r.a.b.d ENSGT00940000153770.r.a.a.b.b.b ENSGT00940000153094.a.a ENSGT00940000153770.r.a.b.c.a ENSGT00940000153770.r.b.b ENSGT00940000153094.b ENSGT00940000154869.b.b.e.b ENSGT00940000153770.s.a.a ENSGT00940000153094.a.b.a.a ENSGT00940000153770.r.a.a.a.b.a.b.b.b.a.a ENSGT00940000154869.b.b.f ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000015020 ENSGT00960000188573 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b Testudinoidea ANCESTRAL SPECIES 37 ENSGT00940000153770.r.a.a.a.b.a.a.a ENSGT00940000154869.b.b.e.a.a.a.b.a.a ENSGT00940000153770.r.a.b.d ENSGT00940000153094.a.a.a.a.b ENSGT00940000154869.b.b.e.a.a.b.b ENSGT00940000153770.r.a.a.b.b.a.a.a.b ENSGT00940000153770.r.a.a.a.b.a.b.b.b.a.a ENSGT00940000154869.b.b.f.a ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000015020 ENSGT00960000188573 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT01030000234607.A.a.b.b ENSGT00510000049555 Testudinidae ANCESTRAL SPECIES 31 ENSGT00940000153770.r.a.a.a.b.a.b.b.b.b.b.a.a.a ENSGT00940000153094.a.b.b ENSGT00940000154869.b.b.f.a.a ENSGT00940000156351 #22 ENSGT00390000016232.o ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT00960000188573 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT01030000234607.A.a.b.b ENSGT00510000049555 Goode s thornscrub tortoise MODERN SPECIES 19 ENSGEVG00005000180 ENSGEVG00005000162 ENSGEVG00005000149 ENSGEVG00005000135 ENSGEVG00005020971 ENSGEVG00005020968 ENSGEVG00005020965 ENSGEVG00005020960 ENSGEVG00005020956 ENSGEVG00005020955 ENSGEVG00005020954 ENSGEVG00005020953 ENSGEVG00005020951 ENSGEVG00005020949 ENSGEVG00005020948 SUCLG1 (ENSGEVG00005020946) #22 ENSGEVG00005020944 ENSGEVG00005020938 LRRTM1 (ENSGEVG00005020934) CTNNA2 (ENSGEVG00005020931) ADRA1D (ENSGEVG00005020927) SMOX (ENSGEVG00005020920) RNF24 (ENSGEVG00005020916) ENSGEVG00005020910 ENSGEVG00005020907 ENSGEVG00005020905 PTPRA (ENSGEVG00005020899) ENSGEVG00005020896 MRPS26 (ENSGEVG00005020893) ENSGEVG00005020891 ENSGEVG00005020885 Abingdon island giant tortoise MODERN SPECIES 409 SUCLG1 (ENSCABG00000014411) #22 Emydidae ANCESTRAL SPECIES 1 ENSGT00390000006413 #11 ENSGT00940000153203.A.b #12 ENSGT00940000156588 #13 ENSGT00940000173644 ENSGT00950000185620 ENSGT00940000161244 ENSGT00940000156114 #16 ENSGT00940000155135 #17 ENSGT00940000158503 #18 ENSGT00940000165574 #19 ENSGT00940000158121 #20 ENSGT00390000004352 #21 ENSGT00940000153770.r.a.a.b.b.a.a.a.b ENSGT00940000153770.r.a.a.a.b.a.b.b.b.a.a ENSGT00940000154869.b.b.f.a ENSGT00940000156351 #22 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT01050000245143 ENSGT00940000159585 ENSGT00390000015020 ENSGT00960000188573 ENSGT00390000008453 ENSGT00390000004511.d ENSGT00390000004511.c.a ENSGT00510000049555 ENSGT00940000154078.b Three-toed box turtle MODERN SPECIES 26 ENSTMTG00000003046 ENSTMTG00000003060 ENSTMTG00000003068 ENSTMTG00000003078 ENSTMTG00000003089 ENSTMTG00000003120 ENSTMTG00000003129 ENSTMTG00000003137 ENSTMTG00000000087 ENSTMTG00000000119 ENSTMTG00000000136 ENSTMTG00000000213 ENSTMTG00000000226 ENSTMTG00000000242 ENSTMTG00000000266 SUCLG1 (ENSTMTG00000000283) #22 ENSTMTG00000000332 LRRTM1 (ENSTMTG00000000395) CTNNA2 (ENSTMTG00000000422) ADRA1D (ENSTMTG00000000479) SMOX (ENSTMTG00000000499) RNF24 (ENSTMTG00000000512) ENSTMTG00000000525 ENSTMTG00000000531 ENSTMTG00000000546 PTPRA (ENSTMTG00000000564) ENSTMTG00000000589 MRPS26 (ENSTMTG00000000595) ENSTMTG00000000607 ENSTMTG00000000623 UBOX5 (ENSTMTG00000000649) painted turtle MODERN SPECIES 725 SMYD1 (ENSCPBG00000001374) #16 FABP1 (ENSCPBG00000001384) #17 THNSL2 (ENSCPBG00000001406) #18 ENSCPBG00000001431 #18 ENSCPBG00000001450 ENSCPBG00000001463 #19 EIF2AK3 (ENSCPBG00000001482) #20 RPIA (ENSCPBG00000001505) #21 ENSCPBG00000001567 ENSCPBG00000002058 ENSCPBG00000002070 ENSCPBG00000002087 ENSCPBG00000002115 ENSCPBG00000002126 ENSCPBG00000002137 SUCLG1 (ENSCPBG00000002163) #22 Chinese turtle MODERN SPECIES 1464 ENSPSIG00000007982 ENSPSIG00000000926 ENSPSIG00000000888 ENSPSIG00000007903 ENSPSIG00000000845 ENSPSIG00000000821 SUCLG1 (ENSPSIG00000007650) #22 ENSPSIG00000007460 LRRTM1 (ENSPSIG00000000790) CTNNA2 (ENSPSIG00000007147) ENSPSIG00000000726 ENSPSIG00000006846 ENSPSIG00000000696