Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000163889 #11	ENSGT00940000163374	ENSGT01100000264273 #9	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00940000170720	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37
Glires	ANCESTRAL SPECIES	1	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT01100000264273 #9	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00940000170720	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT01100000264273 #9	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00940000170720	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT01100000264273 #9	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00940000170720	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT01100000264273 #9	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Naked mole-rat female	MODERN SPECIES	14	GSTP1 (ENSHGLG00000018697) #7	NDUFV1 (ENSHGLG00000042428) #8	ENSHGLG00000048694 #9	ENSHGLG00000018636 #10	NUDT8 (ENSHGLG00000047808) #11	TBX10 (ENSHGLG00000015945) #12	ACY3 (ENSHGLG00000015831) #13	ALDH3B2 (ENSHGLG00000010052) #14	UNC93B1 (ENSHGLG00000011769) #15	ALDH3B1 (ENSHGLG00000015602) #16	NDUFS8 (ENSHGLG00000009570) #17	TCIRG1 (ENSHGLG00000018395) #18	CHKA (ENSHGLG00000014648) #19	KMT5B (ENSHGLG00000014467) #20	C11orf24 (ENSHGLG00000018642) #21	LRP5 (ENSHGLG00000012372) #22	ENSHGLG00000010435 #23	GAL (ENSHGLG00000013095) #24	TESMIN (ENSHGLG00000006844) #25	CPT1A (ENSHGLG00000009799) #26	ENSHGLG00000041256 #27	MRPL21 (ENSHGLG00000007657) #28	IGHMBP2 (ENSHGLG00000006468) #29	MRGPRD (ENSHGLG00000033970) #30	MRGPRF (ENSHGLG00000042564) #31	TPCN2 (ENSHGLG00000009786) #32	SMIM38 (ENSHGLG00000042963) #33	CCND1 (ENSHGLG00000039478) #34	ORAOV1 (ENSHGLG00000041285) #35	FGF19 (ENSHGLG00000049791) #36	FGF4 (ENSHGLG00000008219) #37
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00940000159796	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128	ENSGT00940000157182
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00940000159796	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128	ENSGT00940000157182
Long-tailed chinchilla	MODERN SPECIES	129	CABP2 (ENSCLAG00000015734)	GSTP1 (ENSCLAG00000015548) #7	NDUFV1 (ENSCLAG00000016746) #8	ENSCLAG00000016785 #10	ENSCLAG00000016240	TBX10 (ENSCLAG00000015667) #12	ACY3 (ENSCLAG00000016314) #13	ALDH3B2 (ENSCLAG00000017296) #14	UNC93B1 (ENSCLAG00000016729) #15	ALDH3B1 (ENSCLAG00000016029) #16	NDUFS8 (ENSCLAG00000017156) #17	TCIRG1 (ENSCLAG00000014792) #18	CHKA (ENSCLAG00000014223) #19	KMT5B (ENSCLAG00000016628) #20	ENSCLAG00000017122 #21	LRP5 (ENSCLAG00000016254) #22	PPP6R3 (ENSCLAG00000015508) #23	GAL (ENSCLAG00000016374) #24	TESMIN (ENSCLAG00000015628) #25	CPT1A (ENSCLAG00000016594) #26	MRPL21 (ENSCLAG00000016038) #28	IGHMBP2 (ENSCLAG00000015500) #29	MRGPRD (ENSCLAG00000016417) #30	MRGPRF (ENSCLAG00000016323) #31	TPCN2 (ENSCLAG00000016178) #32	CCND1 (ENSCLAG00000014981) #34	LTO1 (ENSCLAG00000014111) #35	FGF19 (ENSCLAG00000015041) #36	ENSCLAG00000014848 #37	FGF3 (ENSCLAG00000015995)	ANO1 (ENSCLAG00000015936)
Degu	MODERN SPECIES	59	ENSODEG00000017726 #7	NDUFV1 (ENSODEG00000017535) #8	ENSODEG00000017660 #10	ENSODEG00000017697	TBX10 (ENSODEG00000017601) #12	ACY3 (ENSODEG00000017439) #13	ALDH3B2 (ENSODEG00000017453) #14	ENSODEG00000017464	UNC93B1 (ENSODEG00000017652) #15	ALDH3B1 (ENSODEG00000017474) #16	ENSODEG00000017577 #17	TCIRG1 (ENSODEG00000017607) #18	CHKA (ENSODEG00000017808) #19	ENSODEG00000017460 #20	C11orf24 (ENSODEG00000017396) #21	LRP5 (ENSODEG00000017493) #22	ENSODEG00000020451	PPP6R3 (ENSODEG00000017311) #23	GAL (ENSODEG00000017519) #24	TESMIN (ENSODEG00000017728) #25	CPT1A (ENSODEG00000017481) #26	MRPL21 (ENSODEG00000017369) #28	IGHMBP2 (ENSODEG00000017354) #29	MRGPRD (ENSODEG00000017313) #30	MRGPRF (ENSODEG00000017539) #31	ENSODEG00000017628	ENSODEG00000017365	TPCN2 (ENSODEG00000017370) #32	CCND1 (ENSODEG00000017314) #34	LTO1 (ENSODEG00000017276) #35	FGF19 (ENSODEG00000017850) #36
Guinea pig	MODERN SPECIES	42	CABP2 (ENSCPOG00000023151)	GSTP1 (ENSCPOG00000020253) #7	NDUFV1 (ENSCPOG00000006645) #8	ENSCPOG00000022649 #10	ENSCPOG00000002514	TBX10 (ENSCPOG00000032079) #12	ACY3 (ENSCPOG00000002519) #13	ALDH3B2 (ENSCPOG00000002523) #14	UNC93B1 (ENSCPOG00000026431) #15	ALDH3B1 (ENSCPOG00000021502) #16	NDUFS8 (ENSCPOG00000001416) #17	TCIRG1 (ENSCPOG00000001417) #18	CHKA (ENSCPOG00000022236) #19	KMT5B (ENSCPOG00000002147) #20	ENSCPOG00000000621 #21	LRP5 (ENSCPOG00000008119) #22	PPP6R3 (ENSCPOG00000007353) #23	GAL (ENSCPOG00000004337) #24	TESMIN (ENSCPOG00000032989) #25	CPT1A (ENSCPOG00000004344) #26	MRPL21 (ENSCPOG00000038509) #28	IGHMBP2 (ENSCPOG00000007063) #29	MRGPRD (ENSCPOG00000025266) #30	MRGPRF (ENSCPOG00000033803) #31	TPCN2 (ENSCPOG00000002580) #32	CCND1 (ENSCPOG00000032886) #34	LTO1 (ENSCPOG00000031028) #35	FGF19 (ENSCPOG00000008147) #36	FGF4 (ENSCPOG00000013920) #37	FGF3 (ENSCPOG00000007355)	ANO1 (ENSCPOG00000011005)
Sciuridae	ANCESTRAL SPECIES	22	ENSGT00940000159796	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00940000170720	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37
Marmotini	ANCESTRAL SPECIES	6	ENSGT00940000159796	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Marmotini_b	ANCESTRAL SPECIES	19	ENSGT00940000160334	ENSGT00940000159796	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000154816.a.a #12	ENSGT00390000001189.b #13	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Arctic ground squirrel	MODERN SPECIES	172	CDK2AP2 (ENSUPAG00010007891)	CABP2 (ENSUPAG00010007845)	GSTP1 (ENSUPAG00010007817) #7	NDUFV1 (ENSUPAG00010007803) #8	ENSUPAG00010007785 #10	ENSUPAG00010007775	ENSUPAG00010007771	ACY3 (ENSUPAG00010007756) #13	UNC93B1 (ENSUPAG00010007746) #15	ALDH3B1 (ENSUPAG00010007728) #16	NDUFS8 (ENSUPAG00010007713) #17	TCIRG1 (ENSUPAG00010007691) #18	CHKA (ENSUPAG00010007654) #19	KMT5B (ENSUPAG00010007478) #20	ENSUPAG00010007475 #21	LRP5 (ENSUPAG00010007453) #22	PPP6R3 (ENSUPAG00010007337) #23	ENSUPAG00010007325 #24	CPT1A (ENSUPAG00010007209) #26	MRPL21 (ENSUPAG00010007189) #28	IGHMBP2 (ENSUPAG00010007174) #29	MRGPRD (ENSUPAG00010007168) #30	MRGPRF (ENSUPAG00010007158) #31	TPCN2 (ENSUPAG00010007118) #32	SMIM38 (ENSUPAG00010007115) #33	CCND1 (ENSUPAG00010007111) #34	LTO1 (ENSUPAG00010007106) #35
Squirrel	MODERN SPECIES	199	CABP2 (ENSSTOG00000014876)	GSTP1 (ENSSTOG00000025905) #7	NDUFV1 (ENSSTOG00000005850) #8	ENSSTOG00000021128 #10	ENSSTOG00000024208	TBX10 (ENSSTOG00000011629) #12	ACY3 (ENSSTOG00000015148) #13	UNC93B1 (ENSSTOG00000011497) #15	ALDH3B1 (ENSSTOG00000015155) #16	NDUFS8 (ENSSTOG00000011500) #17	TCIRG1 (ENSSTOG00000024529) #18	CHKA (ENSSTOG00000011503) #19	ENSSTOG00000019647	KMT5B (ENSSTOG00000024331) #20	ENSSTOG00000012277 #21	LRP5 (ENSSTOG00000012285) #22	PPP6R3 (ENSSTOG00000005109) #23	GAL (ENSSTOG00000019759) #24	TESMIN (ENSSTOG00000012841) #25	CPT1A (ENSSTOG00000012856) #26	MRPL21 (ENSSTOG00000032759) #28	IGHMBP2 (ENSSTOG00000003792) #29	MRGPRF (ENSSTOG00000010947) #31	TPCN2 (ENSSTOG00000012097) #32	CCND1 (ENSSTOG00000000408) #34	LTO1 (ENSSTOG00000028728) #35	FGF19 (ENSSTOG00000021758) #36	ENSSTOG00000019792 #37	FGF3 (ENSSTOG00000023034)	ANO1 (ENSSTOG00000026271)	FADD (ENSSTOG00000033252)
Alpin marmot	MODERN SPECIES	86	PITPNM1 (ENSMMMG00000000005)	CABP2 (ENSMMMG00000000025)	GSTP1 (ENSMMMG00000000041) #7	NDUFV1 (ENSMMMG00000000065) #8	ENSMMMG00000000088 #10	NUDT8 (ENSMMMG00000000113) #11	ENSMMMG00000000133	ACY3 (ENSMMMG00000000156) #13	ALDH3B2 (ENSMMMG00000000185) #14	UNC93B1 (ENSMMMG00000000216) #15	ALDH3B1 (ENSMMMG00000000301) #16	NDUFS8 (ENSMMMG00000000351) #17	ENSMMMG00000000378 #18	CHKA (ENSMMMG00000000678) #19	KMT5B (ENSMMMG00000000789) #20	LRP5 (ENSMMMG00000001048) #22	PPP6R3 (ENSMMMG00000001095) #23	GAL (ENSMMMG00000001246) #24	TESMIN (ENSMMMG00000001259) #25	CPT1A (ENSMMMG00000001336) #26	MRPL21 (ENSMMMG00000001368) #28	IGHMBP2 (ENSMMMG00000001381) #29	MRGPRD (ENSMMMG00000001512) #30	MRGPRF (ENSMMMG00000001519) #31	TPCN2 (ENSMMMG00000001627) #32	ENSMMMG00000003260 #34	ENSMMMG00000003262 #34	LTO1 (ENSMMMG00000003272) #35	FGF19 (ENSMMMG00000003282) #36	FGF4 (ENSMMMG00000003298) #37	FGF3 (ENSMMMG00000003325)
Eurasian red squirrel	MODERN SPECIES	2	NDUFV1 (ENSSVLG00005025325) #8	ENSSVLG00005025305 #10	ENSSVLG00005025291	TBX10 (ENSSVLG00005025280) #12	ACY3 (ENSSVLG00005025257) #13	ALDH3B2 (ENSSVLG00005025242) #14	UNC93B1 (ENSSVLG00005025215) #15	ALDH3B1 (ENSSVLG00005025147) #16	NDUFS8 (ENSSVLG00005025114) #17	ENSSVLG00005025100 #18	ENSSVLG00005025068 #18	CHKA (ENSSVLG00005025020) #19	ENSSVLG00005024959	ENSSVLG00005024928 #20	ENSSVLG00005024875 #21	LRP5 (ENSSVLG00005024864) #22	ENSSVLG00005024045 #23	GAL (ENSSVLG00005023853) #24	TESMIN (ENSSVLG00005023772) #25	CPT1A (ENSSVLG00005023707) #26	MRPL21 (ENSSVLG00005023646) #28	ENSSVLG00005023637	ENSSVLG00005023620 #29	MRGPRD (ENSSVLG00005023594) #30	MRGPRF (ENSSVLG00005023569) #31	TPCN2 (ENSSVLG00005023184) #32	ENSSVLG00005023121	CCND1 (ENSSVLG00005023090) #34	LTO1 (ENSSVLG00005023000) #35	FGF19 (ENSSVLG00005022961) #36	FGF4 (ENSSVLG00005022938) #37
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163889 #11	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000164125	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000164125	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00940000155904.e.b.f #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000162460 #7	ENSGT00390000010641.b #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00940000155904.e.b.f #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00390000010641.a #8	ENSGT00390000010641.b #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00940000155904.e.b.f #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Chinese hamster chok1gshd	MODERN SPECIES	401	Gstp1 (ENSCGRG00001020577) #7	Ndufv1 (ENSCGRG00001015739) #8	Doc2g (ENSCGRG00001018346) #10	Nudt8 (ENSCGRG00001011961)	Tbx10 (ENSCGRG00001004850)	Acy3 (ENSCGRG00001022288) #13	Aldh3b2 (ENSCGRG00001013897) #14	Aldh3b3 (ENSCGRG00001006169) #14	Unc93b1 (ENSCGRG00001017240) #15	Aldh3b1 (ENSCGRG00001001915) #16	Ndufs8 (ENSCGRG00001023988) #17	Tcirg1 (ENSCGRG00001015923) #18	Chka (ENSCGRG00001013471) #19	Kmt5b (ENSCGRG00001019834) #20	1810055G02Rik (ENSCGRG00001015629) #21	Lrp5 (ENSCGRG00001011999) #22	Ppp6r3 (ENSCGRG00001009544) #23	Gal (ENSCGRG00001007993) #24	Tesmin (ENSCGRG00001021557) #25	Cpt1a (ENSCGRG00001018477) #26	Mrpl21 (ENSCGRG00001024565) #28	Ighmbp2 (ENSCGRG00001019126) #29	Mrgprd (ENSCGRG00001015216) #30	Mrgprf (ENSCGRG00001021238) #31	Tpcn2 (ENSCGRG00001010845) #32	ENSCGRG00001001688	Ccnd1 (ENSCGRG00001022268) #34	LTO1 (ENSCGRG00001016809) #35	Fgf15 (ENSCGRG00001006635) #36	Fgf4 (ENSCGRG00001018014) #37	Fgf3 (ENSCGRG00001022007)
Golden Hamster	MODERN SPECIES	617	Gstp3 (ENSMAUG00000016934)	Gstp1 (ENSMAUG00000017855) #7	ENSMAUG00000017366 #8	Doc2g (ENSMAUG00000017758) #10	Nudt8 (ENSMAUG00000017149)	Tbx10 (ENSMAUG00000019219)	Acy3 (ENSMAUG00000017411) #13	Aldh3b2 (ENSMAUG00000017545) #14	Unc93b1 (ENSMAUG00000018290) #15	Aldh3b1 (ENSMAUG00000017809) #16	Ndufs8 (ENSMAUG00000017880) #17	Chka (ENSMAUG00000017295) #19	Kmt5b (ENSMAUG00000018918) #20	ENSMAUG00000018025	1810055G02Rik (ENSMAUG00000017064) #21	Lrp5 (ENSMAUG00000018003) #22	Ppp6r3 (ENSMAUG00000019291) #23	Gal (ENSMAUG00000017428) #24	Tesmin (ENSMAUG00000017925) #25	Cpt1a (ENSMAUG00000018165) #26	Mrpl21 (ENSMAUG00000018243) #28	Ighmbp2 (ENSMAUG00000019893) #29	Mrgprf (ENSMAUG00000017389) #31	Tpcn2 (ENSMAUG00000018105) #32	ENSMAUG00000020083 #33	ENSMAUG00000001942	Ccnd1 (ENSMAUG00000017636) #34	LTO1 (ENSMAUG00000018685) #35	Fgf15 (ENSMAUG00000018536) #36	ENSMAUG00000018543 #37	Fgf3 (ENSMAUG00000017622)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000162460 #7	ENSGT00390000010641.b #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00940000155904.e.b.f #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Prairie vole	MODERN SPECIES	16	ENSMOCG00000020246 #7	Ndufv1 (ENSMOCG00000018645) #8	Doc2g (ENSMOCG00000007770) #10	Nudt8 (ENSMOCG00000002104)	Tbx10 (ENSMOCG00000018876)	Acy3 (ENSMOCG00000016646) #13	Aldh3b2 (ENSMOCG00000022624) #14	Aldh3b3 (ENSMOCG00000021302) #14	Unc93b1 (ENSMOCG00000008961) #15	Aldh3b1 (ENSMOCG00000020373) #16	ENSMOCG00000019842	Tcirg1 (ENSMOCG00000005946) #18	Chka (ENSMOCG00000007076) #19	Kmt5b (ENSMOCG00000015596) #20	1810055G02Rik (ENSMOCG00000021230) #21	Lrp5 (ENSMOCG00000011074) #22	Ppp6r3 (ENSMOCG00000020408) #23	Gal (ENSMOCG00000005202) #24	Tesmin (ENSMOCG00000003633) #25	Cpt1a (ENSMOCG00000014661) #26	Mrpl21 (ENSMOCG00000002555) #28	Ighmbp2 (ENSMOCG00000018939) #29	Mrgprf (ENSMOCG00000005355) #31	Tpcn2 (ENSMOCG00000013268) #32	ENSMOCG00000021239 #33	Ccnd1 (ENSMOCG00000013593) #34	LTO1 (ENSMOCG00000011612) #35	Fgf15 (ENSMOCG00000020351) #36	ENSMOCG00000003096 #37	Fgf3 (ENSMOCG00000022933)	Ano1 (ENSMOCG00000014655)
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000005365	Ndufv1 (ENSPEMG00000011587) #8	Doc2g (ENSPEMG00000005234) #10	Nudt8 (ENSPEMG00000018440)	Tbx10 (ENSPEMG00000017754)	ENSPEMG00000014977 #13	Aldh3b2 (ENSPEMG00000026919) #14	Aldh3b3 (ENSPEMG00000024395) #14	Unc93b1 (ENSPEMG00000015773) #15	Aldh3b1 (ENSPEMG00000026438) #16	Ndufs8 (ENSPEMG00000014723) #17	Tcirg1 (ENSPEMG00000007012) #18	Chka (ENSPEMG00000010890) #19	Kmt5b (ENSPEMG00000013458) #20	1810055G02Rik (ENSPEMG00000016140) #21	Lrp5 (ENSPEMG00000011601) #22	Ppp6r3 (ENSPEMG00000018116) #23	Gal (ENSPEMG00000013588) #24	Tesmin (ENSPEMG00000019187) #25	Cpt1a (ENSPEMG00000003628) #26	Mrpl21 (ENSPEMG00000015425) #28	Ighmbp2 (ENSPEMG00000017775) #29	Mrgprd (ENSPEMG00000004118) #30	Mrgprf (ENSPEMG00000025731) #31	Tpcn2 (ENSPEMG00000018425) #32	Smim38 (ENSPEMG00000019158) #33	Ccnd1 (ENSPEMG00000018939) #34	LTO1 (ENSPEMG00000008663) #35	ENSPEMG00000027742	Fgf15 (ENSPEMG00000008128) #36	Fgf4 (ENSPEMG00000018637) #37
Murinae	ANCESTRAL SPECIES		ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00940000155904.e.b.f #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Mus	ANCESTRAL SPECIES		ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00940000155904.e.b.f #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535 #28	ENSGT00930000151035.a #29	ENSGT01030000234639.A.b.a.b.b #30	ENSGT01030000234639.A.b.a.a #31	ENSGT00940000159763 #32	ENSGT01070000254034 #33	ENSGT00940000157816 #34	ENSGT00390000009426 #35	ENSGT00940000160601 #36	ENSGT00940000158825 #37	ENSGT00940000161128
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00940000155904.e.b.f #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535.e #28	ENSGT00930000151035.a #29
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000162460 #7	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00940000155904.e.b.f #14	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535.e #28	ENSGT00930000151035.a #29
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000164125	ENSGT00390000010641 #8	ENSGT00940000162875 #10	ENSGT00940000162775	ENSGT00940000163374	ENSGT00390000001189.b #13	ENSGT00940000155904.e.b.e #14	ENSGT00920000150159	ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23	ENSGT00390000009663 #24	ENSGT00940000161379 #25	ENSGT01060000248595.b.a.b.a #26	ENSGT00390000005535.e #28	ENSGT00930000151035.a #29
Steppe mouse	MODERN SPECIES	2566										Aldh3b1 (ENSMSIG00000012641) #16	Ndufs8 (ENSMSIG00000012673) #17	Tcirg1 (ENSMSIG00000012689) #18	Chka (ENSMSIG00000012948) #19	Kmt5b (ENSMSIG00000013087) #20	1810055G02Rik (ENSMSIG00000013200) #21	Lrp5 (ENSMSIG00000013219) #22	Ppp6r3 (ENSMSIG00000013276) #23	Tesmin (ENSMSIG00000014016) #25	ENSMSIG00000014054 #24	Cpt1a (ENSMSIG00000014070) #26	ENSMSIG00000014116	Mrpl21 (ENSMSIG00000014121) #28	Ighmbp2 (ENSMSIG00000014147) #29
spretus	MODERN SPECIES	10	Gstp3 (MGP_SPRETEiJ_G0023400)	Ndufv1 (MGP_SPRETEiJ_G0023399) #8	Doc2g (MGP_SPRETEiJ_G0023398) #10	Nudt8 (MGP_SPRETEiJ_G0023397)	Tbx10 (MGP_SPRETEiJ_G0023396)	Acy3 (MGP_SPRETEiJ_G0023395) #13	MGP_SPRETEiJ_G0023394	Unc93b1 (MGP_SPRETEiJ_G0023393) #15	Aldh3b1 (MGP_SPRETEiJ_G0023392) #16	Ndufs8 (MGP_SPRETEiJ_G0023391) #17	Tcirg1 (MGP_SPRETEiJ_G0023390) #18	MGP_SPRETEiJ_G0023389 #14	Chka (MGP_SPRETEiJ_G0023388) #19	Kmt5b (MGP_SPRETEiJ_G0023387) #20	1810055G02Rik (MGP_SPRETEiJ_G0023386) #21	Lrp5 (MGP_SPRETEiJ_G0023385) #22	Ppp6r3 (MGP_SPRETEiJ_G0023384) #23	MGP_SPRETEiJ_G0023383 #24	Tesmin (MGP_SPRETEiJ_G0023382) #25	Cpt1a (MGP_SPRETEiJ_G0023381) #26	Ighmbp2 (MGP_SPRETEiJ_G0014700) #29
Mouse	MODERN SPECIES	10	Gstp1 (ENSMUSG00000060803) #7	Ndufv1 (ENSMUSG00000037916) #8	Doc2g (ENSMUSG00000024871) #10	Nudt8 (ENSMUSG00000110949)	Tbx10 (ENSMUSG00000037477)	Acy3 (ENSMUSG00000024866) #13	Aldh3b2 (ENSMUSG00000075296) #14	Aldh3b3 (ENSMUSG00000037263) #14	Unc93b1 (ENSMUSG00000036908) #15	Aldh3b1 (ENSMUSG00000024885) #16	Ndufs8 (ENSMUSG00000059734) #17	Tcirg1 (ENSMUSG00000001750) #18	Chka (ENSMUSG00000024843) #19	Kmt5b (ENSMUSG00000045098) #20	1810055G02Rik (ENSMUSG00000035372) #21	Lrp5 (ENSMUSG00000024913) #22	Ppp6r3 (ENSMUSG00000024908) #23	Gal (ENSMUSG00000024907) #24	Tesmin (ENSMUSG00000024905) #25	Cpt1a (ENSMUSG00000024900) #26	Mrpl21 (ENSMUSG00000024829) #28	Ighmbp2 (ENSMUSG00000024831) #29
Ryukyu mouse	MODERN SPECIES	10	MGP_CAROLIEiJ_G0022484 #7	Ndufv1 (MGP_CAROLIEiJ_G0022483) #8	Doc2g (MGP_CAROLIEiJ_G0022482) #10	Nudt8 (MGP_CAROLIEiJ_G0022481)	Tbx10 (MGP_CAROLIEiJ_G0022480)	Acy3 (MGP_CAROLIEiJ_G0022479) #13	Aldh3b2 (MGP_CAROLIEiJ_G0022478) #14	MGP_CAROLIEiJ_G0022477	Unc93b1 (MGP_CAROLIEiJ_G0022476) #15	Aldh3b1 (MGP_CAROLIEiJ_G0022475) #16	Ndufs8 (MGP_CAROLIEiJ_G0022474) #17	Tcirg1 (MGP_CAROLIEiJ_G0022473) #18	Chka (MGP_CAROLIEiJ_G0022472) #19	Kmt5b (MGP_CAROLIEiJ_G0022471) #20	1810055G02Rik (MGP_CAROLIEiJ_G0022470) #21	Lrp5 (MGP_CAROLIEiJ_G0022469) #22	Ppp6r3 (MGP_CAROLIEiJ_G0022468) #23	MGP_CAROLIEiJ_G0022467 #24	Tesmin (MGP_CAROLIEiJ_G0022466) #25	Cpt1a (MGP_CAROLIEiJ_G0022465) #26	Mrpl21 (MGP_CAROLIEiJ_G0022464) #28	Ighmbp2 (MGP_CAROLIEiJ_G0022463) #29
Shrew mouse	MODERN SPECIES		MGP_PahariEiJ_G0013981 #7	Ndufv1 (MGP_PahariEiJ_G0013980) #8	Doc2g (MGP_PahariEiJ_G0013979) #10	Nudt8 (MGP_PahariEiJ_G0013978)	Tbx10 (MGP_PahariEiJ_G0013977)	Acy3 (MGP_PahariEiJ_G0013976) #13	Aldh3b2 (MGP_PahariEiJ_G0013975) #14	MGP_PahariEiJ_G0013974	Unc93b1 (MGP_PahariEiJ_G0013973) #15	Aldh3b1 (MGP_PahariEiJ_G0013972) #16	Ndufs8 (MGP_PahariEiJ_G0013971) #17	Tcirg1 (MGP_PahariEiJ_G0013970) #18	Chka (MGP_PahariEiJ_G0013969) #19	Kmt5b (MGP_PahariEiJ_G0013968) #20	1810055G02Rik (MGP_PahariEiJ_G0013967) #21	Lrp5 (MGP_PahariEiJ_G0013966) #22	Ppp6r3 (MGP_PahariEiJ_G0013965) #23	MGP_PahariEiJ_G0013964 #24	Tesmin (MGP_PahariEiJ_G0013963) #25	Cpt1a (MGP_PahariEiJ_G0013962) #26	MGP_PahariEiJ_G0013961 #28	Ighmbp2 (MGP_PahariEiJ_G0013960) #29	Mrgprd (MGP_PahariEiJ_G0013959) #30	Mrgprf (MGP_PahariEiJ_G0013958) #31	Tpcn2 (MGP_PahariEiJ_G0013957) #32	Ccnd1 (MGP_PahariEiJ_G0013956) #34	MGP_PahariEiJ_G0013955 #35	Fgf15 (MGP_PahariEiJ_G0013954) #36	Fgf4 (MGP_PahariEiJ_G0013953) #37	Fgf3 (MGP_PahariEiJ_G0013952)	Ano1 (MGP_PahariEiJ_G0013951)
Rat	MODERN SPECIES		Nudt8 (ENSRNOG00000017955)	Acy3 (ENSRNOG00000017901) #13	Tbx10 (ENSRNOG00000017944)	Aldh3b2 (ENSRNOG00000068138) #14	ENSRNOG00000069460 #16	ENSRNOG00000066970 #14	LOC120099971 (ENSRNOG00000017872) #14	Unc93b1 (ENSRNOG00000017703) #15	Aldh3b1 (ENSRNOG00000017512) #16	Ndufs8 (ENSRNOG00000017446) #17	Tcirg1 (ENSRNOG00000017220) #18	Chka (ENSRNOG00000016791) #19	Kmt5b (ENSRNOG00000016790) #20	AABR07006081.1 (ENSRNOG00000016597)	RGD1311946 (ENSRNOG00000025245) #21	Lrp5 (ENSRNOG00000015911) #22	Ppp6r3 (ENSRNOG00000015540) #23	Gal (ENSRNOG00000015156) #24	Tesmin (ENSRNOG00000014671) #25	Cpt1a (ENSRNOG00000014254) #26	Mrpl21 (ENSRNOG00000013845) #28	Ighmbp2 (ENSRNOG00000013456) #29	Mrgprd (ENSRNOG00000013448) #30	Mrgprf (ENSRNOG00000013426) #31	Tpcn2 (ENSRNOG00000013387) #32	Ccnd1 (ENSRNOG00000020918) #34	Lto1 (ENSRNOG00000020903) #35	Fgf19 (ENSRNOG00000020899) #36	Fgf4 (ENSRNOG00000020890) #37	Fgf3 (ENSRNOG00000020888)	Ano1 (ENSRNOG00000020865)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1324								Nudt8 (ENSNGAG00000002777)	ENSNGAG00000007366	Unc93b1 (ENSNGAG00000010893) #15	Aldh3b1 (ENSNGAG00000012520) #16	Ndufs8 (ENSNGAG00000013139) #17	Tcirg1 (ENSNGAG00000014303) #18	Chka (ENSNGAG00000017194) #19	Kmt5b (ENSNGAG00000018362) #20	Lrp5 (ENSNGAG00000013122) #22	ENSNGAG00000012705	ENSNGAG00000016433 #21	Ppp6r3 (ENSNGAG00000020310) #23	Gal (ENSNGAG00000021287) #24	Tesmin (ENSNGAG00000022272) #25	Cpt1a (ENSNGAG00000023574) #26	Mrpl21 (ENSNGAG00000023813) #28	Ighmbp2 (ENSNGAG00000006566) #29	Mrgprf (ENSNGAG00000021640) #31
Lesser Egyptian jerboa	MODERN SPECIES	60	ENSJJAG00000023512 #7	Ndufv1 (ENSJJAG00000017874) #8	Doc2g (ENSJJAG00000021341) #10	Nudt8 (ENSJJAG00000023328)	Tbx10 (ENSJJAG00000022634)	Acy3 (ENSJJAG00000019193) #13	ENSJJAG00000023409 #14	Unc93b1 (ENSJJAG00000023583) #15	Aldh3b1 (ENSJJAG00000020011) #16	Ndufs8 (ENSJJAG00000005023) #17	Tcirg1 (ENSJJAG00000017427) #18	Chka (ENSJJAG00000012227) #19	ENSJJAG00000017165 #20	1810055G02Rik (ENSJJAG00000023128) #21	ENSJJAG00000012387	Lrp5 (ENSJJAG00000015575) #22	Ppp6r3 (ENSJJAG00000012747) #23	Gal (ENSJJAG00000015277) #24	Tesmin (ENSJJAG00000019166) #25	Cpt1a (ENSJJAG00000019639) #26	Mrpl21 (ENSJJAG00000018455) #28	Ighmbp2 (ENSJJAG00000022964) #29	Mrgprf (ENSJJAG00000017168) #31	Tpcn2 (ENSJJAG00000019473) #32	ENSJJAG00000000500	Mro (ENSJJAG00000018866)	ENSJJAG00000007096	Ska1 (ENSJJAG00000008382)	Cxxc1 (ENSJJAG00000022206)	Mbd1 (ENSJJAG00000022859)	ENSJJAG00000023145
Kangaroo rat	MODERN SPECIES	373	Cabp2 (ENSDORG00000014527)	Gstp3 (ENSDORG00000024771)	ENSDORG00000002063 #7	Ndufv1 (ENSDORG00000010074) #8	Doc2g (ENSDORG00000026896) #10	ENSDORG00000010072 #11	Tbx10 (ENSDORG00000010070)	Acy3 (ENSDORG00000027105) #13	ENSDORG00000027104 #14	Unc93b1 (ENSDORG00000003564) #15	Aldh3b1 (ENSDORG00000003566) #16	ENSDORG00000003567	Tcirg1 (ENSDORG00000012469) #18	Chka (ENSDORG00000012471) #19	ENSDORG00000015449 #20	Lrp5 (ENSDORG00000003026) #22	Ppp6r3 (ENSDORG00000015410) #23	ENSDORG00000013895 #25	Cpt1a (ENSDORG00000011817) #26	Mrpl21 (ENSDORG00000025967) #28	Ighmbp2 (ENSDORG00000026350) #29	Mrgprd (ENSDORG00000023697) #30	Mrgprf (ENSDORG00000009826) #31	Tpcn2 (ENSDORG00000002980) #32	ENSDORG00000029122 #34	LTO1 (ENSDORG00000012520) #35	ENSDORG00000024888 #37	Ano1 (ENSDORG00000009084)	Ppfia1 (ENSDORG00000016082)	Cttn (ENSDORG00000009315)	Shank2 (ENSDORG00000011912)
Lagomorpha	ANCESTRAL SPECIES	263									ENSGT00530000063359.B #15	ENSGT00940000162915 #16	ENSGT00390000003049 #17	ENSGT00950000182881.a.b.a.b #18	ENSGT00950000182939.a.b.b #19	ENSGT00940000156431 #20	ENSGT00940000153377.B #21	ENSGT00940000156574.C #22	ENSGT00390000009899.a.d #23
Pika	MODERN SPECIES	2661																LRP5 (ENSOPRG00000000764) #22
Rabbit	MODERN SPECIES	652												ENSOCUG00000037783 #15	ENSOCUG00000039281 #16	KMT5B (ENSOCUG00000002778) #20	ENSOCUG00000027517	ENSOCUG00000013645 #22	PPP6R3 (ENSOCUG00000006068) #23
Tree shrew	MODERN SPECIES	3770															ENSTBEG00000006799 #21	LRP5 (ENSTBEG00000007403) #22