Mammalia	ANCESTRAL SPECIES		ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00940000164592	ENSGT00940000164372	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000163955	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120 #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Theria	ANCESTRAL SPECIES	1	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Eutheria	ANCESTRAL SPECIES	17	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Glires	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Rodentia	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Sciuridae	ANCESTRAL SPECIES	34	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.a.b.a ##11	ENSGT00940000153284.a.g.a ##10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005000440 #7	ENSSVLG00005000420 #8	GPR12 (ENSSVLG00005000385) #9	ENSSVLG00005000350 #10	ENSSVLG00005000213 #11	RASL11A (ENSSVLG00005023466) #12	GTF3A (ENSSVLG00005023413) #13	MTIF3 (ENSSVLG00005023396) #14	LNX2 (ENSSVLG00005023366) #15	POLR1D (ENSSVLG00005023318) #16	GSX1 (ENSSVLG00005023295) #17	PDX1 (ENSSVLG00005023276) #18	CDX2 (ENSSVLG00005023249) #19	URAD (ENSSVLG00005023233) #20	FLT3 (ENSSVLG00005023095) #21	PAN3 (ENSSVLG00005022998) #22	FLT1 (ENSSVLG00005022893) #23	POMP (ENSSVLG00005022839) #24	SLC46A3 (ENSSVLG00005022784) #25	MTUS2 (ENSSVLG00005022484) #26	SLC7A1 (ENSSVLG00005022416) #27	UBL3 (ENSSVLG00005022374) #28	KATNAL1 (ENSSVLG00005022343) #29	ENSSVLG00005022302 #30	USPL1 (ENSSVLG00005022232) #31	ALOX5AP (ENSSVLG00005022177) #32	MEDAG (ENSSVLG00005022152) #33	TEX26 (ENSSVLG00005022083) #34	ENSSVLG00005021904 #35	HSPH1 (ENSSVLG00005021367) #36	B3GLCT (ENSSVLG00005021156) #37
Marmotini	ANCESTRAL SPECIES	29	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.a.b.a ##11	ENSGT00940000153284.a.g.a ##10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.a.b.a ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Squirrel	MODERN SPECIES	72	SLITRK5 (ENSSTOG00000022257)	GPR12 (ENSSTOG00000011362) #9	ENSSTOG00000023839	USP12 (ENSSTOG00000011364) ##10	ENSSTOG00000033637 ##11	RASL11A (ENSSTOG00000023879) #12	GTF3A (ENSSTOG00000013853) #13	MTIF3 (ENSSTOG00000013866) #14	LNX2 (ENSSTOG00000013869) #15	POLR1D (ENSSTOG00000013877) #16	GSX1 (ENSSTOG00000029234) #17	PDX1 (ENSSTOG00000028173) #18	ENSSTOG00000002918 #19	ENSSTOG00000028014	FLT3 (ENSSTOG00000002925) #21	PAN3 (ENSSTOG00000009453) #22	FLT1 (ENSSTOG00000021178) #23	POMP (ENSSTOG00000013687) #24	SLC46A3 (ENSSTOG00000013694) #25	ENSSTOG00000022794 #26	SLC7A1 (ENSSTOG00000012771) #27	UBL3 (ENSSTOG00000012777) #28	KATNAL1 (ENSSTOG00000008802) #29	ENSSTOG00000000443 ##30	USPL1 (ENSSTOG00000028023) #31	ALOX5AP (ENSSTOG00000010915) #32	MEDAG (ENSSTOG00000003534) #33	ENSSTOG00000020892 #35	HSPH1 (ENSSTOG00000001700) #36	B3GLCT (ENSSTOG00000001710) #37	RXFP2 (ENSSTOG00000010636)
Arctic ground squirrel	MODERN SPECIES	58		SLITRK5 (ENSUPAG00010018031)	GPR12 (ENSUPAG00010018043) #9	USP12 (ENSUPAG00010018049) ##10	ENSUPAG00010018061 ##11	RASL11A (ENSUPAG00010018073) #12	GTF3A (ENSUPAG00010018082) #13	MTIF3 (ENSUPAG00010018090) #14	LNX2 (ENSUPAG00010018096) #15	POLR1D (ENSUPAG00010018107) #16	GSX1 (ENSUPAG00010018112) #17	PDX1 (ENSUPAG00010018122) #18	CDX2 (ENSUPAG00010018125) #19	ENSUPAG00010018133	FLT3 (ENSUPAG00010018139) #21	PAN3 (ENSUPAG00010000039) #22	FLT1 (ENSUPAG00010000212) #23	POMP (ENSUPAG00010000279) #24	SLC46A3 (ENSUPAG00010000307) #25	ENSUPAG00010000323	ENSUPAG00010000338 #26	SLC7A1 (ENSUPAG00010000429) #27	UBL3 (ENSUPAG00010000449) #28	KATNAL1 (ENSUPAG00010000483) #29	ENSUPAG00010000514 ##30	USPL1 (ENSUPAG00010000537) #31	ALOX5AP (ENSUPAG00010000582) #32	MEDAG (ENSUPAG00010000596) #33	TEX26 (ENSUPAG00010000608) #34	ENSUPAG00010000650 #35	HSPH1 (ENSUPAG00010000704) #36
Alpin marmot	MODERN SPECIES	13	ENSMMMG00000021355	SLITRK5 (ENSMMMG00000021362)	GPR12 (ENSMMMG00000021388) #9	ENSMMMG00000021396	ENSMMMG00000021402 ##10	RPL21 (ENSMMMG00000021415) ##11	RASL11A (ENSMMMG00000021424) #12	GTF3A (ENSMMMG00000021436) #13	MTIF3 (ENSMMMG00000021440) #14	LNX2 (ENSMMMG00000021459) #15	POLR1D (ENSMMMG00000021469) #16	GSX1 (ENSMMMG00000021480) #17	CDX2 (ENSMMMG00000021482) #19	ENSMMMG00000021485	FLT3 (ENSMMMG00000021498) #21	PAN3 (ENSMMMG00000021592) #22	FLT1 (ENSMMMG00000021722) #23	POMP (ENSMMMG00000021745) #24	SLC46A3 (ENSMMMG00000021759) #25	ENSMMMG00000021777 #26	SLC7A1 (ENSMMMG00000021811) #27	UBL3 (ENSMMMG00000021836) #28	KATNAL1 (ENSMMMG00000021861) #29	ENSMMMG00000021875 ##30	ENSMMMG00000021912 #31	ALOX5AP (ENSMMMG00000021924) #32	MEDAG (ENSMMMG00000021928) #33	TEX26 (ENSMMMG00000021931) #34	ENSMMMG00000021936 #35	HSPH1 (ENSMMMG00000021945) #36	B3GLCT (ENSMMMG00000022023) #37
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.c #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.c #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.c #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Degu	MODERN SPECIES	79	GPR12 (ENSODEG00000006388) #9	USP12 (ENSODEG00000006744) ##10	ENSODEG00000005022 ##11	RASL11A (ENSODEG00000005775) #12	GTF3A (ENSODEG00000006725) #13	MTIF3 (ENSODEG00000006818) #14	LNX2 (ENSODEG00000006222) #15	ENSODEG00000005294 #16	ENSODEG00000006454	GSX1 (ENSODEG00000005135) #17	ENSODEG00000019134	PDX1 (ENSODEG00000005235) #18	CDX2 (ENSODEG00000007340) #19	ENSODEG00000007620	FLT3 (ENSODEG00000007884) #21	PAN3 (ENSODEG00000005038) #22	ENSODEG00000006016	ENSODEG00000006274 #23	ENSODEG00000005111 #24	ENSODEG00000005569	SLC46A3 (ENSODEG00000006238) #25	ENSODEG00000006635	ENSODEG00000005871 #26	SLC7A1 (ENSODEG00000005306) #27	ENSODEG00000005438	UBL3 (ENSODEG00000005571) #28	KATNAL1 (ENSODEG00000005926) #29	ENSODEG00000006120 ##30	USPL1 (ENSODEG00000007176) #31	ALOX5AP (ENSODEG00000005645) #32	MEDAG (ENSODEG00000005967) #33
Long-tailed chinchilla	MODERN SPECIES	204	CDK8 (ENSCLAG00000003311)	WASF3 (ENSCLAG00000003372)	GPR12 (ENSCLAG00000003409) #9	USP12 (ENSCLAG00000003543) ##10	Rpl21 (ENSCLAG00000003656) ##11	RASL11A (ENSCLAG00000003867) #12	GTF3A (ENSCLAG00000003912) #13	MTIF3 (ENSCLAG00000004080) #14	LNX2 (ENSCLAG00000004148) #15	POLR1D (ENSCLAG00000017623) #16	ENSCLAG00000004320	GSX1 (ENSCLAG00000004357) #17	PDX1 (ENSCLAG00000006652) #18	CDX2 (ENSCLAG00000006810) #19	FLT3 (ENSCLAG00000007093) #21	PAN3 (ENSCLAG00000007575) #22	FLT1 (ENSCLAG00000008187) #23	POMP (ENSCLAG00000008609) #24	SLC46A3 (ENSCLAG00000009379) #25
Guinea pig	MODERN SPECIES	6	RNF6 (ENSCPOG00000009120)	CDK8 (ENSCPOG00000040435)	WASF3 (ENSCPOG00000010156)	ENSCPOG00000020112	USP12 (ENSCPOG00000005241) ##10	ENSCPOG00000008784 ##11	RASL11A (ENSCPOG00000031264) #12	GTF3A (ENSCPOG00000010143) #13	MTIF3 (ENSCPOG00000010148) #14	LNX2 (ENSCPOG00000010152) #15	ENSCPOG00000033461	ENSCPOG00000026854	PDX1 (ENSCPOG00000024534) #18	CDX2 (ENSCPOG00000007276) #19	FLT3 (ENSCPOG00000007285) #21	PAN3 (ENSCPOG00000013349) #22	FLT1 (ENSCPOG00000013357) #23	POMP (ENSCPOG00000001710) #24	SLC46A3 (ENSCPOG00000015460) #25	ENSCPOG00000005581 #26	SLC7A1 (ENSCPOG00000005590) #27	UBL3 (ENSCPOG00000036242) #28	KATNAL1 (ENSCPOG00000000804) #29	HMGB1 (ENSCPOG00000031835) #30	USPL1 (ENSCPOG00000009937) #31	ALOX5AP (ENSCPOG00000032690) #32	MEDAG (ENSCPOG00000003921) #33	ENSCPOG00000007441 #36	ENSCPOG00000035490	B3GLCT (ENSCPOG00000007455) #37	RXFP2 (ENSCPOG00000009157)
Naked mole-rat female	MODERN SPECIES	2	WASF3 (ENSHGLG00000006350)	GPR12 (ENSHGLG00000042343) #9	ENSHGLG00000006711 ##10	ENSHGLG00000005660 #11	RASL11A (ENSHGLG00000005304) #12	ENSHGLG00000004173 #13	MTIF3 (ENSHGLG00000003959) #14	LNX2 (ENSHGLG00000003410) #15	POLR1D (ENSHGLG00000039229) #16	ENSHGLG00000003202	GSX1 (ENSHGLG00000039858) #17	PDX1 (ENSHGLG00000010243) #18	CDX2 (ENSHGLG00000009166) #19	URAD (ENSHGLG00000008479) #20	FLT3 (ENSHGLG00000005717) #21	PAN3 (ENSHGLG00000018782) #22	FLT1 (ENSHGLG00000003643) #23	ENSHGLG00000008991 #24	SLC46A3 (ENSHGLG00000007999) #25	ENSHGLG00000039882 ##24	ENSHGLG00000012383	ENSHGLG00000013589 #26	ENSHGLG00000019220 #27	ENSHGLG00000033244	UBL3 (ENSHGLG00000040587) #28	KATNAL1 (ENSHGLG00000003538) #29	ENSHGLG00000003352 ##30	USPL1 (ENSHGLG00000036213) #31	ALOX5AP (ENSHGLG00000013689) #32	MEDAG (ENSHGLG00000037818) #33	TEX26 (ENSHGLG00000018916) #34
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b ##11	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Myomorpha	ANCESTRAL SPECIES	46	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Muroidea	ANCESTRAL SPECIES	68	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Muroidea_A	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.d ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Cricetidae	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.d ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.d ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37	ENSGT00940000158948.b
Chinese hamster chok1gshd	MODERN SPECIES	130	Gpr12 (ENSCGRG00001003285) #9	ENSCGRG00001021742 ##10	Rpl21 (ENSCGRG00001007602) ##11	Rasl11a (ENSCGRG00001014752) #12	Gtf3a (ENSCGRG00001024969) #13	Mtif3 (ENSCGRG00001024612) #14	ENSCGRG00001024532	Lnx2 (ENSCGRG00001022751) #15	Polr1d (ENSCGRG00001021251) #16	Gsx1 (ENSCGRG00001017641) #17	Pdx1 (ENSCGRG00001024891) #18	Cdx2 (ENSCGRG00001024259) #19	Urad (ENSCGRG00001021146)	Flt3 (ENSCGRG00001010328) #21	ENSCGRG00001012489	Pan3 (ENSCGRG00001024986) #22	Flt1 (ENSCGRG00001000764) #23	Pomp (ENSCGRG00001000803) #24	Slc46a3 (ENSCGRG00001023870) #25	ENSCGRG00001001206	Mtus2 (ENSCGRG00001023648) #26	Slc7a1 (ENSCGRG00001019393) #27	Ubl3 (ENSCGRG00001002093) #28	Katnal1 (ENSCGRG00001024027) #29	ENSCGRG00001018342 #31	Alox5ap (ENSCGRG00001018470) #32	ENSCGRG00001025063	Medag (ENSCGRG00001024417) #33	Tex26 (ENSCGRG00001015836) #34	Wdr95 (ENSCGRG00001015579) #35	Hsph1 (ENSCGRG00001021270) #36
Golden Hamster	MODERN SPECIES	762	Rfc3 (ENSMAUG00000016464)	Gpr12 (ENSMAUG00000015064) #9	ENSMAUG00000010877	Usp12 (ENSMAUG00000010310) ##10	ENSMAUG00000006957 ##11	Rasl11a (ENSMAUG00000019356) #12	Gtf3a (ENSMAUG00000016253) #13	Mtif3 (ENSMAUG00000011167) #14	Lnx2 (ENSMAUG00000009457) #15	Polr1d (ENSMAUG00000001946) #16	Pdx1 (ENSMAUG00000021082) #18	Cdx2 (ENSMAUG00000020822) #19	Urad (ENSMAUG00000019946)	ENSMAUG00000001106	Flt3 (ENSMAUG00000011952) #21	Pan3 (ENSMAUG00000021155) #22	Flt1 (ENSMAUG00000006859) #23	Pomp (ENSMAUG00000006509) #24	ENSMAUG00000020285	ENSMAUG00000018323 #26	Slc7a1 (ENSMAUG00000000359) #27	Ubl3 (ENSMAUG00000016399) #28	Katnal1 (ENSMAUG00000007731) #29	ENSMAUG00000017646	ENSMAUG00000013736 #31	Alox5ap (ENSMAUG00000012262) #32	Medag (ENSMAUG00000009604) #33	Tex26 (ENSMAUG00000016345) #34	Wdr95 (ENSMAUG00000014604) #35	Hsph1 (ENSMAUG00000002443) #36	B3glct (ENSMAUG00000018787) #37
Cricetidae_B	ANCESTRAL SPECIES	49	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.d ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Prairie vole	MODERN SPECIES	7	ENSMOCG00000017944	Gpr12 (ENSMOCG00000009890) #9	Usp12 (ENSMOCG00000001714) ##10	Rpl21 (ENSMOCG00000003487) ##11	Rasl11a (ENSMOCG00000000626) #12	ENSMOCG00000017124	Gtf3a (ENSMOCG00000004408) #13	Mtif3 (ENSMOCG00000017226) #14	Lnx2 (ENSMOCG00000022088) #15	Polr1d (ENSMOCG00000021288) #16	Gsx1 (ENSMOCG00000002374) #17	Pdx1 (ENSMOCG00000007886) #18	Cdx2 (ENSMOCG00000010222) #19	Urad (ENSMOCG00000018154)	Flt3 (ENSMOCG00000015945) #21	Pan3 (ENSMOCG00000001443) #22	Flt1 (ENSMOCG00000019790) #23	ENSMOCG00000000648	Pomp (ENSMOCG00000006131) #24	Slc46a3 (ENSMOCG00000007090) #25	Mtus2 (ENSMOCG00000013900) #26	Slc7a1 (ENSMOCG00000022298) #27	Ubl3 (ENSMOCG00000012896) #28	Katnal1 (ENSMOCG00000013914) #29	ENSMOCG00000018161 ##30	ENSMOCG00000018612 #31	Alox5ap (ENSMOCG00000018258) #32	Medag (ENSMOCG00000012447) #33	Tex26 (ENSMOCG00000013830) #34	Wdr95 (ENSMOCG00000021942) #35	Hsph1 (ENSMOCG00000019013) #36
Northern American deer mouse	MODERN SPECIES	15	Wasf3 (ENSPEMG00000011510)	ENSPEMG00000030961	Gpr12 (ENSPEMG00000010665) #9	Usp12 (ENSPEMG00000008193) ##10	Rpl21 (ENSPEMG00000006041) ##11	Rasl11a (ENSPEMG00000004475) #12	Gtf3a (ENSPEMG00000003201) #13	Mtif3 (ENSPEMG00000000930) #14	Lnx2 (ENSPEMG00000008280) #15	Polr1d (ENSPEMG00000006336) #16	Gsx1 (ENSPEMG00000004992) #17	Pdx1 (ENSPEMG00000001176) #18	Cdx2 (ENSPEMG00000000632) #19	Urad (ENSPEMG00000025423)	Flt3 (ENSPEMG00000012278) #21	Pan3 (ENSPEMG00000008992) #22	Flt1 (ENSPEMG00000019000) #23	ENSPEMG00000014341 #24	Slc46a3 (ENSPEMG00000014019) #25	ENSPEMG00000024696	Mtus2 (ENSPEMG00000011863) #26	Slc7a1 (ENSPEMG00000006808) #27	Ubl3 (ENSPEMG00000010779) #28	Katnal1 (ENSPEMG00000009164) #29	ENSPEMG00000000834 ##30	Uspl1 (ENSPEMG00000003660) #31	Alox5ap (ENSPEMG00000000576) #32	Medag (ENSPEMG00000000331) #33	Tex26 (ENSPEMG00000019024) #34	Wdr95 (ENSPEMG00000016428) #35	Hsph1 (ENSPEMG00000009941) #36
Murinae	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Mus	ANCESTRAL SPECIES	17	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
spretus	MODERN SPECIES	14	Cdk8 (MGP_SPRETEiJ_G0029023)	Wasf3 (MGP_SPRETEiJ_G0029024)	Gpr12 (MGP_SPRETEiJ_G0029025) #9	Usp12 (MGP_SPRETEiJ_G0029026) ##10	MGP_SPRETEiJ_G0029027 ##11	Rasl11a (MGP_SPRETEiJ_G0029028) #12	Gtf3a (MGP_SPRETEiJ_G0029029) #13	Mtif3 (MGP_SPRETEiJ_G0029030) #14	Lnx2 (MGP_SPRETEiJ_G0029031) #15	Polr1d (MGP_SPRETEiJ_G0029032) #16	Gsx1 (MGP_SPRETEiJ_G0029033) #17	Pdx1 (MGP_SPRETEiJ_G0029034) #18	Cdx2 (MGP_SPRETEiJ_G0029035) #19	Urad (MGP_SPRETEiJ_G0029036)	Flt3 (MGP_SPRETEiJ_G0029037) #21	Pan3 (MGP_SPRETEiJ_G0029038) #22	Flt1 (MGP_SPRETEiJ_G0029039) #23	Pomp (MGP_SPRETEiJ_G0029040) #24	Slc46a3 (MGP_SPRETEiJ_G0029041) #25	Mtus2 (MGP_SPRETEiJ_G0029042) #26	Slc7a1 (MGP_SPRETEiJ_G0029043) #27	Ubl3 (MGP_SPRETEiJ_G0029044) #28	MGP_SPRETEiJ_G0029045 #29	MGP_SPRETEiJ_G0029046 #29	MGP_SPRETEiJ_G0029047 ##30	Uspl1 (MGP_SPRETEiJ_G0029048) #31	Alox5ap (MGP_SPRETEiJ_G0029049) #32	Medag (MGP_SPRETEiJ_G0029050) #33	Tex26 (MGP_SPRETEiJ_G0029051) #34	Wdr95 (MGP_SPRETEiJ_G0029052) #35	Hsph1 (MGP_SPRETEiJ_G0029053) #36
Steppe mouse	MODERN SPECIES	3364	Gpr12 (ENSMSIG00000024129) #9	ENSMSIG00000024119	Usp12 (ENSMSIG00000024096) ##10	ENSMSIG00000024049 ##11	Rasl11a (ENSMSIG00000024039) #12	Gtf3a (ENSMSIG00000024026) #13	Mtif3 (ENSMSIG00000024005) #14	Lnx2 (ENSMSIG00000023999) #15	ENSMSIG00000023978 #16	Gsx1 (ENSMSIG00000023969) #17	Pdx1 (ENSMSIG00000023956) #18	Cdx2 (ENSMSIG00000023947) #19	ENSMSIG00000023941 #20	ENSMSIG00000023930	Flt3 (ENSMSIG00000023851) #21	Pan3 (ENSMSIG00000023687) #22	Flt1 (ENSMSIG00000023642) #23	ENSMSIG00000023628	Pomp (ENSMSIG00000023598) #24	Slc46a3 (ENSMSIG00000023578) #25	Mtus2 (ENSMSIG00000023484) #26	Slc7a1 (ENSMSIG00000023421) #27	Ubl3 (ENSMSIG00000023402) #28	Katnal1 (ENSMSIG00000023377) #29	ENSMSIG00000023332 #30	Uspl1 (ENSMSIG00000023285) #31	Alox5ap (ENSMSIG00000023243) #32	ENSMSIG00000023226	Medag (ENSMSIG00000023188) #33	Tex26 (ENSMSIG00000023128) #34	Wdr95 (ENSMSIG00000023065) #35
Mouse	MODERN SPECIES	14	Gm3409 (ENSMUSG00000096664)	Gm3415 (ENSMUSG00000095557)	Gpr12 (ENSMUSG00000041468) #9	Usp12 (ENSMUSG00000029640) ##10	Rpl21 (ENSMUSG00000041453) ##11	Rasl11a (ENSMUSG00000029641) #12	Gtf3a (ENSMUSG00000016503) #13	Mtif3 (ENSMUSG00000016510) #14	Lnx2 (ENSMUSG00000016520) #15	Polr1d (ENSMUSG00000029642) #16	Gsx1 (ENSMUSG00000053129) #17	Pdx1 (ENSMUSG00000029644) #18	Cdx2 (ENSMUSG00000029646) #19	Urad (ENSMUSG00000075543)	Flt3 (ENSMUSG00000042817) #21	Pan3 (ENSMUSG00000029647) #22	Flt1 (ENSMUSG00000029648) #23	Pomp (ENSMUSG00000029649) #24	Slc46a3 (ENSMUSG00000029650) #25	Mtus2 (ENSMUSG00000029651) #26	Slc7a1 (ENSMUSG00000041313) #27	Ubl3 (ENSMUSG00000001687) #28	Katnal1 (ENSMUSG00000041298) #29	Hmgb1 (ENSMUSG00000066551) ##30	Uspl1 (ENSMUSG00000041264) #31	Alox5ap (ENSMUSG00000060063) #32	Medag (ENSMUSG00000029659) #33	Tex26 (ENSMUSG00000029660) #34	Wdr95 (ENSMUSG00000029658) #35	Hsph1 (ENSMUSG00000029657) #36	B3glct (ENSMUSG00000051950) #37
Ryukyu mouse	MODERN SPECIES	14	Cdk8 (MGP_CAROLIEiJ_G0028025)	Wasf3 (MGP_CAROLIEiJ_G0028026)	Gpr12 (MGP_CAROLIEiJ_G0028027) #9	Usp12 (MGP_CAROLIEiJ_G0028028) ##10	Rpl21 (MGP_CAROLIEiJ_G0028029) ##11	Rasl11a (MGP_CAROLIEiJ_G0028030) #12	Gtf3a (MGP_CAROLIEiJ_G0028031) #13	Mtif3 (MGP_CAROLIEiJ_G0028032) #14	Lnx2 (MGP_CAROLIEiJ_G0028033) #15	Polr1d (MGP_CAROLIEiJ_G0028034) #16	Gsx1 (MGP_CAROLIEiJ_G0028035) #17	Pdx1 (MGP_CAROLIEiJ_G0028036) #18	Cdx2 (MGP_CAROLIEiJ_G0028037) #19	Urad (MGP_CAROLIEiJ_G0028038)	Flt3 (MGP_CAROLIEiJ_G0028039) #21	Pan3 (MGP_CAROLIEiJ_G0028040) #22	Flt1 (MGP_CAROLIEiJ_G0028041) #23	Pomp (MGP_CAROLIEiJ_G0028042) #24	Slc46a3 (MGP_CAROLIEiJ_G0028043) #25	Mtus2 (MGP_CAROLIEiJ_G0028044) #26	Slc7a1 (MGP_CAROLIEiJ_G0028045) #27	Ubl3 (MGP_CAROLIEiJ_G0028046) #28	MGP_CAROLIEiJ_G0028047 #29	MGP_CAROLIEiJ_G0028048 #29	MGP_CAROLIEiJ_G0028049 ##30	Uspl1 (MGP_CAROLIEiJ_G0028050) #31	MGP_CAROLIEiJ_G0028051 #32	Medag (MGP_CAROLIEiJ_G0028052) #33	Tex26 (MGP_CAROLIEiJ_G0028053) #34	Wdr95 (MGP_CAROLIEiJ_G0028054) #35	Hsph1 (MGP_CAROLIEiJ_G0028055) #36
Shrew mouse	MODERN SPECIES	15	Cdk8 (MGP_PahariEiJ_G0024591)	Wasf3 (MGP_PahariEiJ_G0024592)	Gpr12 (MGP_PahariEiJ_G0024593) #9	Usp12 (MGP_PahariEiJ_G0024594) ##10	MGP_PahariEiJ_G0024595 ##11	Rasl11a (MGP_PahariEiJ_G0024596) #12	Gtf3a (MGP_PahariEiJ_G0024597) #13	Mtif3 (MGP_PahariEiJ_G0024598) #14	Lnx2 (MGP_PahariEiJ_G0024599) #15	Polr1d (MGP_PahariEiJ_G0024600) #16	Gsx1 (MGP_PahariEiJ_G0024601) #17	Pdx1 (MGP_PahariEiJ_G0024602) #18	Cdx2 (MGP_PahariEiJ_G0024603) #19	Urad (MGP_PahariEiJ_G0024604)	Flt3 (MGP_PahariEiJ_G0024605) #21	Pan3 (MGP_PahariEiJ_G0024606) #22	Flt1 (MGP_PahariEiJ_G0024607) #23	MGP_PahariEiJ_G0024608	Slc46a3 (MGP_PahariEiJ_G0024609) #25	Mtus2 (MGP_PahariEiJ_G0024610) #26	Slc7a1 (MGP_PahariEiJ_G0024611) #27	Ubl3 (MGP_PahariEiJ_G0024612) #28	MGP_PahariEiJ_G0024613 #29	MGP_PahariEiJ_G0024614 #29	MGP_PahariEiJ_G0024615 ##30	Uspl1 (MGP_PahariEiJ_G0024616) #31	Alox5ap (MGP_PahariEiJ_G0024617) #32	Medag (MGP_PahariEiJ_G0024618) #33	Tex26 (MGP_PahariEiJ_G0024619) #34	MGP_PahariEiJ_G0024620 #35	Hsph1 (MGP_PahariEiJ_G0024621) #36
Rat	MODERN SPECIES	3	LOC120095889 (ENSRNOG00000050264)	Wasf3 (ENSRNOG00000048898)	Gpr12 (ENSRNOG00000039832) #9	Usp12 (ENSRNOG00000033411) ##10	Rpl21 (ENSRNOG00000000957) ##11	Rasl11a (ENSRNOG00000000956) #12	Gtf3a (ENSRNOG00000050016) #13	Mtif3 (ENSRNOG00000070811) #14	Lnx2 (ENSRNOG00000000955) #15	Polr1d (ENSRNOG00000000954) #16	Gsx1 (ENSRNOG00000000952) #17	Pdx1 (ENSRNOG00000046458) #18	Cdx2 (ENSRNOG00000032759) #19	Urad (ENSRNOG00000050360)	Flt3 (ENSRNOG00000054764) #21	Pan3 (ENSRNOG00000000942) #22	Flt1 (ENSRNOG00000000940) #23	Pomp (ENSRNOG00000049229) ##24	Slc46a3 (ENSRNOG00000000937) #25	Mtus2 (ENSRNOG00000032410) #26	Slc7a1 (ENSRNOG00000000924) #27	Katnal1 (ENSRNOG00000047618) #29	Rpl35a-ps6 (ENSRNOG00000069961)	AABR07035218.1 (ENSRNOG00000029813) ##30	Uspl1 (ENSRNOG00000000909) #31	Alox5ap (ENSRNOG00000000907) #32	AABR07035203.1 (ENSRNOG00000060198)	Medag (ENSRNOG00000000906) #33	Tex26 (ENSRNOG00000000905) #34	Wdr95 (ENSRNOG00000000904) #35	Hsph1 (ENSRNOG00000000902) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1878	Usp12 (ENSNGAG00000023867) ##10	ENSNGAG00000012493	ENSNGAG00000022375 ##11	Rasl11a (ENSNGAG00000021721) #12	Gtf3a (ENSNGAG00000023691) #13	Mtif3 (ENSNGAG00000022911) #14	Lnx2 (ENSNGAG00000010972) #15	Polr1d (ENSNGAG00000006014) #16	ENSNGAG00000019459	ENSNGAG00000020643	Gsx1 (ENSNGAG00000013964) #17	ENSNGAG00000011527	Pdx1 (ENSNGAG00000024275) #18	Cdx2 (ENSNGAG00000019299) #19	Flt3 (ENSNGAG00000022203) #21	Pan3 (ENSNGAG00000005671) #22	Flt1 (ENSNGAG00000022615) #23	ENSNGAG00000019389 #24	Slc46a3 (ENSNGAG00000023221) #25	ENSNGAG00000022087	ENSNGAG00000011243 ##26	ENSNGAG00000023043 #26	Slc7a1 (ENSNGAG00000011095) #27	Ubl3 (ENSNGAG00000021531) #28	Katnal1 (ENSNGAG00000018344) #29	ENSNGAG00000020735 #30	Uspl1 (ENSNGAG00000021450) #31	Alox5ap (ENSNGAG00000010455) #32	Medag (ENSNGAG00000021713) #33	Tex26 (ENSNGAG00000016306) #34	ENSNGAG00000021744
Lesser Egyptian jerboa	MODERN SPECIES	73	Cdk8 (ENSJJAG00000009532)	Wasf3 (ENSJJAG00000018294)	Gpr12 (ENSJJAG00000012507) #9	Usp12 (ENSJJAG00000019341) ##10	Rasl11a (ENSJJAG00000020910) #12	Gtf3a (ENSJJAG00000011501) #13	Mtif3 (ENSJJAG00000013006) #14	Lnx2 (ENSJJAG00000014998) #15	ENSJJAG00000022671 #16	ENSJJAG00000009076	Gsx1 (ENSJJAG00000021574) #17	Pdx1 (ENSJJAG00000017468) #18	Cdx2 (ENSJJAG00000010229) #19	Urad (ENSJJAG00000022682)	Flt3 (ENSJJAG00000004796) #21	Pan3 (ENSJJAG00000013560) #22	Flt1 (ENSJJAG00000009276) #23	Pomp (ENSJJAG00000014017) #24	Slc46a3 (ENSJJAG00000015117) #25	ENSJJAG00000008307 #26	Slc7a1 (ENSJJAG00000022034) #27	Ubl3 (ENSJJAG00000016514) #28	Katnal1 (ENSJJAG00000011429) #29	ENSJJAG00000000696 ##30	ENSJJAG00000014544 #31	Alox5ap (ENSJJAG00000004614) #32	Medag (ENSJJAG00000017396) #33	Tex26 (ENSJJAG00000007098) #34	Wdr95 (ENSJJAG00000015306) #35	Hsph1 (ENSJJAG00000000436) #36	B3glct (ENSJJAG00000022078) #37
Kangaroo rat	MODERN SPECIES	421	Wasf3 (ENSDORG00000003345)	Gpr12 (ENSDORG00000011141) #9	Usp12 (ENSDORG00000009137) ##10	ENSDORG00000002224	ENSDORG00000002226 ##11	Rasl11a (ENSDORG00000026016) #12	Gtf3a (ENSDORG00000006079) #13	ENSDORG00000006081 #14	Lnx2 (ENSDORG00000013453) #15	Polr1d (ENSDORG00000029155) #16	Gsx1 (ENSDORG00000029182) #17	Pdx1 (ENSDORG00000008418) #18	Cdx2 (ENSDORG00000005495) #19	Urad (ENSDORG00000025006)	Flt3 (ENSDORG00000010727) #21	Pan3 (ENSDORG00000014727) #22	Flt1 (ENSDORG00000014729) #23	Pomp (ENSDORG00000012432) #24	Slc46a3 (ENSDORG00000012433) #25	ENSDORG00000025782 #26	Slc7a1 (ENSDORG00000006086) #27	ENSDORG00000026706	Ubl3 (ENSDORG00000026903) #28	Katnal1 (ENSDORG00000012794) #29	ENSDORG00000027930 ##30	Uspl1 (ENSDORG00000007790) #31	Alox5ap (ENSDORG00000006041) #32	Medag (ENSDORG00000008557) #33	ENSDORG00000008558 #34	Wdr95 (ENSDORG00000026485) #35	ENSDORG00000014903 #36
Lagomorpha	ANCESTRAL SPECIES	166				ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27
Rabbit	MODERN SPECIES	468			USP12 (ENSOCUG00000007088) ##10	ENSOCUG00000002506 ##11	RASL11A (ENSOCUG00000008121) #12	ENSOCUG00000038419	GTF3A (ENSOCUG00000011713) #13	MTIF3 (ENSOCUG00000011721) #14	LNX2 (ENSOCUG00000015683) #15	ENSOCUG00000015706	GSX1 (ENSOCUG00000023424) #17	PDX1 (ENSOCUG00000004891) #18	CDX2 (ENSOCUG00000004893) #19	URAD (ENSOCUG00000026219) #20	FLT3 (ENSOCUG00000004897) #21	PAN3 (ENSOCUG00000008509) #22	FLT1 (ENSOCUG00000008523) #23	POMP (ENSOCUG00000010137) #24	SLC46A3 (ENSOCUG00000010129) #25	ENSOCUG00000013473 #26	ENSOCUG00000030839 #26	SLC7A1 (ENSOCUG00000013493) #27
Pika	MODERN SPECIES	2256																PAN3 (ENSOPRG00000016465) #22	FLT1 (ENSOPRG00000016484) #23	POMP (ENSOPRG00000016517) #24	SLC46A3 (ENSOPRG00000016527) #25
Tree shrew	MODERN SPECIES	2583																PAN3 (ENSTBEG00000017359) #22	FLT1 (ENSTBEG00000009960) #23
Primates	ANCESTRAL SPECIES	29	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Haplorrhini	ANCESTRAL SPECIES	43	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Catarrhini	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00940000154686.g.b
Hominidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h	ENSGT00940000153654.ub
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h	ENSGT00940000153654.ub
Pan	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00390000015470.z.b	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00930000151026.f	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h
Chimpanzee	MODERN SPECIES	4	GPR12 (ENSPTRG00000046989) #9	USP12 (ENSPTRG00000005727) ##10	RPL21 (ENSPTRG00000005728) ##11	RASL11A (ENSPTRG00000005729) #12	GTF3A (ENSPTRG00000005730) #13	MTIF3 (ENSPTRG00000005732) #14	LNX2 (ENSPTRG00000005733) #15	POLR1D (ENSPTRG00000005734) #16	GSX1 (ENSPTRG00000005735) #17	PDX1 (ENSPTRG00000005736) #18	ENSPTRG00000005737	CDX2 (ENSPTRG00000043330) #19	URAD (ENSPTRG00000005739) #20	FLT3 (ENSPTRG00000005740) #21	ENSPTRG00000046829	PAN3 (ENSPTRG00000005742) #22	FLT1 (ENSPTRG00000005743) #23	ENSPTRG00000045890	ENSPTRG00000046663	POMP (ENSPTRG00000005745) #24	SLC46A3 (ENSPTRG00000005746) #25	ENSPTRG00000045489	MTUS2 (ENSPTRG00000005747) #26	ENSPTRG00000046056	SLC7A1 (ENSPTRG00000005750) #27	ENSPTRG00000049804	UBL3 (ENSPTRG00000005751) #28	KATNAL1 (ENSPTRG00000005753) #29	ENSPTRG00000044243	UBE2L5 (ENSPTRG00000050842)	ENSPTRG00000048008 #30
Bonobo	MODERN SPECIES	4	CDK8 (ENSPPAG00000035126)	WASF3 (ENSPPAG00000035699)	GPR12 (ENSPPAG00000007707) #9	ENSPPAG00000007246 ##10	ENSPPAG00000042860 ##11	RASL11A (ENSPPAG00000027996) #12	GTF3A (ENSPPAG00000034725) #13	MTIF3 (ENSPPAG00000027304) #14	LNX2 (ENSPPAG00000027444) #15	ENSPPAG00000028138 #16	GSX1 (ENSPPAG00000032556) #17	ENSPPAG00000032720 #18	ENSPPAG00000032440	CDX2 (ENSPPAG00000032963) #19	FLT3 (ENSPPAG00000015701) #21	PAN3 (ENSPPAG00000027826) #22	ENSPPAG00000030264	ENSPPAG00000033250 #23	ENSPPAG00000027416	POMP (ENSPPAG00000036286) #24	SLC46A3 (ENSPPAG00000035795) #25	ENSPPAG00000027903	MTUS2 (ENSPPAG00000032687) #26	ENSPPAG00000034238	SLC7A1 (ENSPPAG00000037016) #27	ENSPPAG00000015303	UBL3 (ENSPPAG00000027496) #28	KATNAL1 (ENSPPAG00000033530) #29	ENSPPAG00000037440	UBE2L5 (ENSPPAG00000032233)	ENSPPAG00000030148 ##30
Human	MODERN SPECIES	4	CDK8 (ENSG00000132964)	WASF3 (ENSG00000132970)	GPR12 (ENSG00000132975) #9	USP12 (ENSG00000152484) ##10	RPL21 (ENSG00000122026) ##11	RASL11A (ENSG00000122035) #12	GTF3A (ENSG00000122034) #13	MTIF3 (ENSG00000122033) #14	LNX2 (ENSG00000139517) #15	POLR1D (ENSG00000186184) #16	GSX1 (ENSG00000169840) #17	PDX1 (ENSG00000139515) #18	CDX2 (ENSG00000165556) #19	URAD (ENSG00000183463) #20	FLT3 (ENSG00000122025) #21	PAN3 (ENSG00000152520) #22	FLT1 (ENSG00000102755) #23	POMP (ENSG00000132963) #24	SLC46A3 (ENSG00000139508) #25	MTUS2 (ENSG00000132938) #26	SLC7A1 (ENSG00000139514) #27	UBL3 (ENSG00000122042) #28	KATNAL1 (ENSG00000102781) #29	UBE2L5 (ENSG00000236444)	HMGB1 (ENSG00000189403) #30	USPL1 (ENSG00000132952) #31	ALOX5AP (ENSG00000132965) #32	MEDAG (ENSG00000102802) #33	TEX26 (ENSG00000175664) #34	HSPH1 (ENSG00000120694) #36	B3GLCT (ENSG00000187676) #37
Gorilla	MODERN SPECIES	4	CDK8 (ENSGGOG00000006569)	WASF3 (ENSGGOG00000012518)	GPR12 (ENSGGOG00000000849) #9	ENSGGOG00000011358 ##10	ENSGGOG00000003002 ##11	RASL11A (ENSGGOG00000008785) #12	GTF3A (ENSGGOG00000008407) #13	MTIF3 (ENSGGOG00000041079) #14	LNX2 (ENSGGOG00000016167) #15	POLR1D (ENSGGOG00000004235) #16	GSX1 (ENSGGOG00000005011) #17	PDX1 (ENSGGOG00000002569) #18	CDX2 (ENSGGOG00000005487) #19	URAD (ENSGGOG00000005489) #20	FLT3 (ENSGGOG00000000882) #21	PAN3 (ENSGGOG00000016079) #22	FLT1 (ENSGGOG00000008750) #23	ENSGGOG00000036812	ENSGGOG00000036780	POMP (ENSGGOG00000015316) #24	SLC46A3 (ENSGGOG00000014254) #25	ENSGGOG00000042729	UBL3 (ENSGGOG00000023146) #28	KATNAL1 (ENSGGOG00000026875) #29	ENSGGOG00000024714	UBE2L5 (ENSGGOG00000006857)	HMGB1 (ENSGGOG00000026764) #30	USPL1 (ENSGGOG00000004673) #31	ENSGGOG00000013859 #32	MEDAG (ENSGGOG00000009867) #33	TEX26 (ENSGGOG00000016812) #34
Orangutan	MODERN SPECIES	4	GPR12 (ENSPPYG00000005231) #9	USP12 (ENSPPYG00000005232) ##10	RPL21 (ENSPPYG00000005233) ##11	RASL11A (ENSPPYG00000005234) #12	GTF3A (ENSPPYG00000005235) #13	MTIF3 (ENSPPYG00000005236) #14	LNX2 (ENSPPYG00000005237) #15	ENSPPYG00000005238	GSX1 (ENSPPYG00000005239) #17	PDX1 (ENSPPYG00000005240) #18	ENSPPYG00000005241	CDX2 (ENSPPYG00000005242) #19	URAD (ENSPPYG00000005243) #20	FLT3 (ENSPPYG00000005244) #21	ENSPPYG00000040072	PAN3 (ENSPPYG00000005245) #22	FLT1 (ENSPPYG00000005246) #23	ENSPPYG00000034417	ENSPPYG00000038952	POMP (ENSPPYG00000005247) #24	SLC46A3 (ENSPPYG00000005248) #25	MTUS2 (ENSPPYG00000005249) #26	SLC7A1 (ENSPPYG00000005250) #27	ENSPPYG00000034870	UBL3 (ENSPPYG00000037129) #28	KATNAL1 (ENSPPYG00000005253) #29	ENSPPYG00000031030	UBE2L5 (ENSPPYG00000005254)	ENSPPYG00000030447 ##30	USPL1 (ENSPPYG00000005543) #31	ENSPPYG00000005255 #32
Gibbon	MODERN SPECIES	24	ATP2B4 (ENSNLEG00000018117)	ENSNLEG00000000323 ##10	ENSNLEG00000000327 #11	RASL11A (ENSNLEG00000000329) #12	GTF3A (ENSNLEG00000000331) #13	MTIF3 (ENSNLEG00000000343) #14	LNX2 (ENSNLEG00000000345) #15	ENSNLEG00000000358 #16	GSX1 (ENSNLEG00000000360) #17	PDX1 (ENSNLEG00000000362) #18	CDX2 (ENSNLEG00000000365) #19	URAD (ENSNLEG00000000369) #20	FLT3 (ENSNLEG00000000372) #21	ENSNLEG00000035718	ENSNLEG00000029210	PAN3 (ENSNLEG00000000388) #22	FLT1 (ENSNLEG00000000456) #23	ENSNLEG00000030098	ENSNLEG00000033802	ENSNLEG00000000571	POMP (ENSNLEG00000000572) #24	SLC46A3 (ENSNLEG00000000599) #25	ENSNLEG00000000618 #26	ENSNLEG00000033304	ENSNLEG00000035615 #26	SLC7A1 (ENSNLEG00000000622) #27	UBL3 (ENSNLEG00000000660) #28	KATNAL1 (ENSNLEG00000000679) #29	ENSNLEG00000000717	UBE2L5 (ENSNLEG00000018657)	ENSNLEG00000000720 ##30
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000155828.o.a	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a.m #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00910000147903	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000155828.o.a	ENSGT00940000156630 #29	ENSGT00940000154686.g.b	ENSGT00390000002316 #31
Macaca	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00910000147903	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34
Pig-tailed macaque	MODERN SPECIES	165	GPR12 (ENSMNEG00000010974) #9	ENSMNEG00000039505 ##10	ENSMNEG00000034115 ##11	RASL11A (ENSMNEG00000033345) #12	GTF3A (ENSMNEG00000043473) #13	MTIF3 (ENSMNEG00000032443) #14	LNX2 (ENSMNEG00000040860) #15	ENSMNEG00000034652	ENSMNEG00000008630 #16	GSX1 (ENSMNEG00000032682) #17	PDX1 (ENSMNEG00000032095) #18	CDX2 (ENSMNEG00000043440) #19	URAD (ENSMNEG00000045421) #20	FLT3 (ENSMNEG00000032442) #21	ENSMNEG00000043801	PAN3 (ENSMNEG00000032817) #22	FLT1 (ENSMNEG00000032149) #23	ENSMNEG00000028177	ENSMNEG00000043904	POMP (ENSMNEG00000031404) #24	SLC46A3 (ENSMNEG00000038996) #25	MTUS2 (ENSMNEG00000039238) #26	SLC7A1 (ENSMNEG00000044453) #27	SLC5A7 (ENSMNEG00000039266)	ENSMNEG00000022050	ST6GAL2 (ENSMNEG00000036708)	ENSMNEG00000019179	ENSMNEG00000044732	UXS1 (ENSMNEG00000040004)	ECRG4 (ENSMNEG00000043594)	NCK2 (ENSMNEG00000039028)
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.i.a ##10	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.a.b.a	ENSGT00950000182922.a.a.a.b.b.a.a.a.m #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT01100000263493.a.b.a.a.b.a.b.b	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36
Rhesus	MODERN SPECIES	8	ENSMMUG00000050226	USP12 (ENSMMUG00000021425) ##10	ENSMMUG00000054994	ENSMMUG00000058755 #11	RASL11A (ENSMMUG00000049650) #12	GTF3A (ENSMMUG00000009029) #13	MTIF3 (ENSMMUG00000009030) #14	ENSMMUG00000059867	LNX2 (ENSMMUG00000058786) #15	POLR1D (ENSMMUG00000020386)	GSX1 (ENSMMUG00000004507) #17	PDX1 (ENSMMUG00000064615) #18	CDX2 (ENSMMUG00000052070) #19	URAD (ENSMMUG00000016138) #20	FLT3 (ENSMMUG00000016139) #21	PAN3 (ENSMMUG00000022522) #22	FLT1 (ENSMMUG00000021538) #23	ENSMMUG00000063649	POMP (ENSMMUG00000058998) #24	SLC46A3 (ENSMMUG00000013721) #25	MTUS2 (ENSMMUG00000008658) #26	SLC7A1 (ENSMMUG00000008661) #27	UBL3 (ENSMMUG00000003771) #28	KATNAL1 (ENSMMUG00000004922) #29	UBE2L5 (ENSMMUG00000008940)	ENSMMUG00000058466	HMGB1 (ENSMMUG00000046615) #30	ENSMMUG00000052770	USPL1 (ENSMMUG00000007597) #31	ALOX5AP (ENSMMUG00000005572) #32	ENSMMUG00000053993
Crab-eating macaque	MODERN SPECIES	8	ENSMFAG00000062305	ENSMFAG00000053340 ##11	RASL11A (ENSMFAG00000044628) #12	GTF3A (ENSMFAG00000044837) #13	MTIF3 (ENSMFAG00000045045) #14	ENSMFAG00000050995	LNX2 (ENSMFAG00000045245) #15	ENSMFAG00000045264	GSX1 (ENSMFAG00000037158) #17	PDX1 (ENSMFAG00000063371) #18	CDX2 (ENSMFAG00000051158) #19	URAD (ENSMFAG00000043442) #20	FLT3 (ENSMFAG00000044854) #21	ENSMFAG00000052223	ENSMFAG00000063510	PAN3 (ENSMFAG00000025538) #22	FLT1 (ENSMFAG00000035718) #23	ENSMFAG00000039222	POMP (ENSMFAG00000025369) #24	SLC46A3 (ENSMFAG00000030072) #25	MTUS2 (ENSMFAG00000032200) #26	SLC7A1 (ENSMFAG00000043457) #27	UBL3 (ENSMFAG00000044955) #28	KATNAL1 (ENSMFAG00000053013) #29	ENSMFAG00000053527	UBE2L5 (ENSMFAG00000045697)	ENSMFAG00000030905 ##30	USPL1 (ENSMFAG00000032370) #31	ALOX5AP (ENSMFAG00000032586) #32	MEDAG (ENSMFAG00000035649) #33	TEX26 (ENSMFAG00000035671) #34
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a.m #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00910000147903	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000155828.o.a	ENSGT00940000156630 #29	ENSGT00940000154686.g.b	ENSGT00390000002316 #31
Olive baboon	MODERN SPECIES	6	GPR12 (ENSPANG00000003061) #9	USP12 (ENSPANG00000011533) ##10	ENSPANG00000011984 #11	RASL11A (ENSPANG00000044196) #12	GTF3A (ENSPANG00000012593) #13	MTIF3 (ENSPANG00000005047) #14	LNX2 (ENSPANG00000012983) #15	ENSPANG00000020259 #16	ENSPANG00000038544	GSX1 (ENSPANG00000017129) #17	ENSPANG00000047094	PDX1 (ENSPANG00000012683) #18	CDX2 (ENSPANG00000050183) #19	URAD (ENSPANG00000014018) #20	FLT3 (ENSPANG00000009315) #21	PAN3 (ENSPANG00000001988) #22	FLT1 (ENSPANG00000009892) #23	ENSPANG00000044787	POMP (ENSPANG00000046275) #24	SLC46A3 (ENSPANG00000020218) #25	MTUS2 (ENSPANG00000013682) #26	SLC7A1 (ENSPANG00000012138) #27	UBL3 (ENSPANG00000008471) #28	KATNAL1 (ENSPANG00000023364) #29	UBE2L5 (ENSPANG00000043221)	HMGB1 (ENSPANG00000007200) ##30	USPL1 (ENSPANG00000005488) #31	ALOX5AP (ENSPANG00000020217) #32	MEDAG (ENSPANG00000021857) #33	TEX26 (ENSPANG00000012755) #34	HSPH1 (ENSPANG00000012232) #36
Cercopithecinae_d	ANCESTRAL SPECIES	93	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a.m #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00910000147903	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031
Sooty mangabey	MODERN SPECIES	255	ENSCATG00000018180	ENSCATG00000038452 ##10	ENSCATG00000032591 #11	RASL11A (ENSCATG00000033838) #12	GTF3A (ENSCATG00000032361) #13	MTIF3 (ENSCATG00000007775) #14	LNX2 (ENSCATG00000035354) #15	ENSCATG00000030710 #16	ENSCATG00000002488	GSX1 (ENSCATG00000028004) #17	PDX1 (ENSCATG00000035793) #18	CDX2 (ENSCATG00000007363) #19	URAD (ENSCATG00000007826) #20	FLT3 (ENSCATG00000014529) #21	ENSCATG00000032726	PAN3 (ENSCATG00000030893) #22	FLT1 (ENSCATG00000034541) #23	ENSCATG00000024438	ENSCATG00000028829	ENSCATG00000033485	POMP (ENSCATG00000037462) #24	SLC46A3 (ENSCATG00000021488) #25	MTUS2 (ENSCATG00000041831) #26	ENSCATG00000037549	SLC7A1 (ENSCATG00000025899) #27	ENSCATG00000034802
Drill	MODERN SPECIES	1324	RNF6 (ENSMLEG00000038569)	CDK8 (ENSMLEG00000040071)	WASF3 (ENSMLEG00000040168)	GPR12 (ENSMLEG00000002545) #9	ENSMLEG00000033598 ##10	ENSMLEG00000024280 ##11	RASL11A (ENSMLEG00000036089) #12	GTF3A (ENSMLEG00000039703) #13	MTIF3 (ENSMLEG00000039110) #14	LNX2 (ENSMLEG00000039062) #15	ENSMLEG00000041048 #16	ENSMLEG00000041805	PDX1 (ENSMLEG00000032316) #18	CDX2 (ENSMLEG00000037430) #19	FLT3 (ENSMLEG00000037398) #21	PAN3 (ENSMLEG00000008619) #22	ENSMLEG00000003098	FLT1 (ENSMLEG00000034284) #23	ENSMLEG00000038076	ENSMLEG00000036390	ENSMLEG00000042438	POMP (ENSMLEG00000039576) #24	SLC46A3 (ENSMLEG00000044293) #25	ENSMLEG00000006158 ##26
Vervet Monkey	MODERN SPECIES	22	RNF6 (ENSCSAG00000017991)	CDK8 (ENSCSAG00000017989)	WASF3 (ENSCSAG00000017987)	GPR12 (ENSCSAG00000018592) #9	ENSCSAG00000017986 ##10	RASL11A (ENSCSAG00000017985) #12	GTF3A (ENSCSAG00000017983) #13	MTIF3 (ENSCSAG00000017982) #14	LNX2 (ENSCSAG00000017981) #15	ENSCSAG00000017980	GSX1 (ENSCSAG00000017979) #17	PDX1 (ENSCSAG00000017977) #18	CDX2 (ENSCSAG00000017976) #19	URAD (ENSCSAG00000017975) #20	FLT3 (ENSCSAG00000017973) #21	PAN3 (ENSCSAG00000017971) #22	FLT1 (ENSCSAG00000017969) #23	POMP (ENSCSAG00000017967) #24	SLC46A3 (ENSCSAG00000017966) #25	MTUS2 (ENSCSAG00000017964) #26	SLC7A1 (ENSCSAG00000017961) #27	UBL3 (ENSCSAG00000017959) #28	KATNAL1 (ENSCSAG00000017958) #29	USPL1 (ENSCSAG00000017953) #31	ALOX5AP (ENSCSAG00000017950) #32	MEDAG (ENSCSAG00000017948) #33	TEX26 (ENSCSAG00000017946) #34	HSPH1 (ENSCSAG00000017943) #36	B3GLCT (ENSCSAG00000017941) #37	RXFP2 (ENSCSAG00000017936)	FRY (ENSCSAG00000017926)
Rhinopithecus	ANCESTRAL SPECIES	56	ENSGT00940000165378.d	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a.m #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.A.b ##26	ENSGT00910000147174	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000153654	ENSGT00390000002575
Black snub-nosed monkey	MODERN SPECIES	1391	CDK8 (ENSRBIG00000040781)	WASF3 (ENSRBIG00000033396)	GPR12 (ENSRBIG00000001744) #9	ENSRBIG00000041212 ##10	ENSRBIG00000036802 ##11	RASL11A (ENSRBIG00000043749) #12	GTF3A (ENSRBIG00000044964) #13	MTIF3 (ENSRBIG00000027271) #14	LNX2 (ENSRBIG00000028850) #15	ENSRBIG00000036378 #16	GSX1 (ENSRBIG00000032182) #17	PDX1 (ENSRBIG00000039353) #18	CDX2 (ENSRBIG00000038667) #19	ENSRBIG00000030643	FLT3 (ENSRBIG00000042399) #21	PAN3 (ENSRBIG00000036981) #22	FLT1 (ENSRBIG00000036952) #23	ENSRBIG00000034378	ENSRBIG00000017410	ENSRBIG00000040184	ENSRBIG00000028141 #24	SLC46A3 (ENSRBIG00000039296) #25	ENSRBIG00000043698	MTUS2 (ENSRBIG00000042717) #26	SLC7A1 (ENSRBIG00000030519) #27	ENSRBIG00000024318	UBL3 (ENSRBIG00000032584) #28
Golden snub-nosed monkey	MODERN SPECIES	603										GSX1 (ENSRROG00000032356) #17	PDX1 (ENSRROG00000038796) #18	CDX2 (ENSRROG00000036416) #19	URAD (ENSRROG00000032393) #20	FLT3 (ENSRROG00000032511) #21	ENSRROG00000038089	PAN3 (ENSRROG00000044835) #22	FLT1 (ENSRROG00000044082) #23	ENSRROG00000044673	ENSRROG00000036924	ENSRROG00000028953	ENSRROG00000035051 #24	SLC46A3 (ENSRROG00000013197) #25	ENSRROG00000029261 ##26
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.b.b ##30	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.b.b ##30	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36
Marmoset	MODERN SPECIES	17	ENSCJAG00000073678	ENSCJAG00000069611	ENSCJAG00000044684 #11	RASL11A (ENSCJAG00000019369) #12	GTF3A (ENSCJAG00000077697) #13	MTIF3 (ENSCJAG00000019378) #14	LNX2 (ENSCJAG00000019379) #15	POLR1D (ENSCJAG00000044669) #16	GSX1 (ENSCJAG00000080181) #17	PDX1 (ENSCJAG00000078316) #18	ENSCJAG00000076582	CDX2 (ENSCJAG00000019398) #19	ENSCJAG00000019404	FLT3 (ENSCJAG00000019405) #21	ENSCJAG00000073991	PAN3 (ENSCJAG00000019421) #22	FLT1 (ENSCJAG00000019447) #23	ENSCJAG00000080582	POMP (ENSCJAG00000019473) #24	SLC46A3 (ENSCJAG00000019491) #25	MTUS2 (ENSCJAG00000019500) #26	ENSCJAG00000072801	SLC7A1 (ENSCJAG00000019515) #27	ENSCJAG00000058143	UBL3 (ENSCJAG00000019517) #28	KATNAL1 (ENSCJAG00000021612) #29	ENSCJAG00000079039	ENSCJAG00000020439 ##30	USPL1 (ENSCJAG00000021616) #31	ALOX5AP (ENSCJAG00000021617) #32	MEDAG (ENSCJAG00000018674) #33
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00390000011417.k.d	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36
Capuchin	MODERN SPECIES	103	ENSCCAG00000021328	USP12 (ENSCCAG00000023369) ##10	ENSCCAG00000031101 #11	RASL11A (ENSCCAG00000021842) #12	GTF3A (ENSCCAG00000029730) #13	MTIF3 (ENSCCAG00000036048) #14	ENSCCAG00000026568	LNX2 (ENSCCAG00000020368) #15	ENSCCAG00000021349 #16	GSX1 (ENSCCAG00000025929) #17	PDX1 (ENSCCAG00000036295) #18	CDX2 (ENSCCAG00000025801) #19	ENSCCAG00000029430	FLT3 (ENSCCAG00000022587) #21	ENSCCAG00000027785	PAN3 (ENSCCAG00000021218) #22	ENSCCAG00000000468	FLT1 (ENSCCAG00000035784) #23	POMP (ENSCCAG00000027871) #24	SLC46A3 (ENSCCAG00000025858) #25	MTUS2 (ENSCCAG00000025313) #26	SLC7A1 (ENSCCAG00000000822) #27	CIAPIN1 (ENSCCAG00000020425)	UBL3 (ENSCCAG00000021780) #28	KATNA1 (ENSCCAG00000029984) #29	ENSCCAG00000028011 ##30	ENSCCAG00000032047	REPS2 (ENSCCAG00000024409)	ENSCCAG00000022504	TXLNG (ENSCCAG00000030583)	SYAP1 (ENSCCAG00000034423)
Bolivian squirrel monkey	MODERN SPECIES	42	ENSSBOG00000031441 ##11	RASL11A (ENSSBOG00000025363) #12	GTF3A (ENSSBOG00000002098) #13	MTIF3 (ENSSBOG00000030469) #14	LNX2 (ENSSBOG00000025148) #15	ENSSBOG00000014497	ENSSBOG00000028482 #16	ENSSBOG00000015416	GSX1 (ENSSBOG00000026103) #17	PDX1 (ENSSBOG00000031436) #18	CDX2 (ENSSBOG00000031573) #19	ENSSBOG00000027743	ENSSBOG00000020835	FLT3 (ENSSBOG00000026666) #21	ENSSBOG00000032374	PAN3 (ENSSBOG00000020298) #22	ENSSBOG00000020899	FLT1 (ENSSBOG00000015766) #23	POMP (ENSSBOG00000032229) #24	SLC46A3 (ENSSBOG00000025396) #25	ENSSBOG00000019071	MTUS2 (ENSSBOG00000026505) #26	SLC7A1 (ENSSBOG00000020061) #27	ENSSBOG00000028866	UBL3 (ENSSBOG00000009211) #28	ENSSBOG00000020013	KATNAL1 (ENSSBOG00000009792) #29	ENSSBOG00000023208 ##30	ENSSBOG00000024496	USPL1 (ENSSBOG00000028053) #31	ALOX5AP (ENSSBOG00000035529) #32
Mas night monkey	MODERN SPECIES	331	NUP58 (ENSANAG00000023073)	ENSANAG00000032118 ##10	ENSANAG00000023031 #11	RASL11A (ENSANAG00000027999) #12	GTF3A (ENSANAG00000019293) #13	MTIF3 (ENSANAG00000031630) #14	ENSANAG00000024188	LNX2 (ENSANAG00000028866) #15	POLR1D (ENSANAG00000024486) #16	GSX1 (ENSANAG00000020508) #17	PDX1 (ENSANAG00000033534) #18	CDX2 (ENSANAG00000030392) #19	URAD (ENSANAG00000029018) #20	FLT3 (ENSANAG00000025242) #21	ENSANAG00000034890	PAN3 (ENSANAG00000028419) #22	ENSANAG00000028102	FLT1 (ENSANAG00000027521) #23	ENSANAG00000035277 #24
Tarsier	MODERN SPECIES	5212														ENSTSYG00000029265 #19	FLT3 (ENSTSYG00000011237) #21	PAN3 (ENSTSYG00000011845) #22	ENSTSYG00000034627	CD2AP (ENSTSYG00000002464)	ENSTSYG00000002476	ADGRF4 (ENSTSYG00000002483)	OPN5 (ENSTSYG00000005962)
Strepsirrhini	ANCESTRAL SPECIES	41	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a #11	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b ##30	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00940000153259.a.a.b.d	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000153284.a.h ##10	ENSGT00950000182922.a.a.a.b.b.a.a.a #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37	ENSGT00940000158948.b
Lemuriformes_a	ANCESTRAL SPECIES	41																ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37	ENSGT00940000158948.b
Greater bamboo lemur	MODERN SPECIES	560																PAN3 (ENSPSMG00000018171) #22	FLT1 (ENSPSMG00000018075) #23	ENSPSMG00000017984 #24	SLC46A3 (ENSPSMG00000017980) #25	ENSPSMG00000017966 #26	SLC7A1 (ENSPSMG00000017930) #27	UBL3 (ENSPSMG00000017878) #28	KATNAL1 (ENSPSMG00000017845) #29	HMGB1 (ENSPSMG00000017832) #30	USPL1 (ENSPSMG00000017819) #31	ALOX5AP (ENSPSMG00000017803) #32	MEDAG (ENSPSMG00000017788) #33	TEX26 (ENSPSMG00000017783) #34	HSPH1 (ENSPSMG00000017725) #36
Coquerels sifaka	MODERN SPECIES	251																PAN3 (ENSPCOG00000000176) #22	FLT1 (ENSPCOG00000020203) #23	ENSPCOG00000024553 #24	SLC46A3 (ENSPCOG00000023509) #25	MTUS2 (ENSPCOG00000022249) #26	SLC7A1 (ENSPCOG00000025154) #27	UBL3 (ENSPCOG00000027179) #28	KATNAL1 (ENSPCOG00000022614) #29	ENSPCOG00000013493 ##30	USPL1 (ENSPCOG00000021502) #31	ALOX5AP (ENSPCOG00000016712) #32	MEDAG (ENSPCOG00000020360) #33	TEX26 (ENSPCOG00000022109) #34	ENSPCOG00000027960 #36	B3GLCT (ENSPCOG00000004609) #37	RXFP2 (ENSPCOG00000011955)
Mouse lemur	MODERN SPECIES	4	SACS (ENSMICG00000034895)	SGCG (ENSMICG00000038162)	ENSMICG00000028275	ENSMICG00000006269 ##10	RASL11A (ENSMICG00000029724) #12	GTF3A (ENSMICG00000014763) #13	MTIF3 (ENSMICG00000014777) #14	LNX2 (ENSMICG00000016873) #15	ENSMICG00000016883 #16	GSX1 (ENSMICG00000044124) #17	PDX1 (ENSMICG00000043487) #18	CDX2 (ENSMICG00000031345) #19	ENSMICG00000032881	FLT3 (ENSMICG00000016201) #21	ENSMICG00000027752	PAN3 (ENSMICG00000016237) #22	FLT1 (ENSMICG00000016251) #23	POMP (ENSMICG00000032068) #24	SLC46A3 (ENSMICG00000016295) #25	ENSMICG00000016299 #26	ENSMICG00000032922 #26	SLC7A1 (ENSMICG00000016312) #27	UBL3 (ENSMICG00000033508) #28	KATNAL1 (ENSMICG00000004250) #29	ENSMICG00000007144 ##30	USPL1 (ENSMICG00000045622) #31	ALOX5AP (ENSMICG00000001953) #32	MEDAG (ENSMICG00000011156) #33	TEX26 (ENSMICG00000008723) #34	HSPH1 (ENSMICG00000011892) #36	B3GLCT (ENSMICG00000011910) #37
Bushbaby	MODERN SPECIES	235	GPR12 (ENSOGAG00000006144) #9	USP12 (ENSOGAG00000030639) ##10	ENSOGAG00000030191	ENSOGAG00000008181 ##11	RASL11A (ENSOGAG00000008177) #12	GTF3A (ENSOGAG00000014589) #13	MTIF3 (ENSOGAG00000014597) #14	LNX2 (ENSOGAG00000014599) #15	POLR1D (ENSOGAG00000014601) #16	GSX1 (ENSOGAG00000011242) #17	PDX1 (ENSOGAG00000016688) #18	CDX2 (ENSOGAG00000026117) #19	ENSOGAG00000016692	FLT3 (ENSOGAG00000016694) #21	ENSOGAG00000031357	PAN3 (ENSOGAG00000014604) #22	FLT1 (ENSOGAG00000014611) #23	POMP (ENSOGAG00000006044) #24	SLC46A3 (ENSOGAG00000006042) #25	MTUS2 (ENSOGAG00000010807) #26	SLC7A1 (ENSOGAG00000010813) #27	UBL3 (ENSOGAG00000004035) #28	KATNAL1 (ENSOGAG00000011308) #29	ENSOGAG00000003205 ##30	ENSOGAG00000030054	ENSOGAG00000026314	USPL1 (ENSOGAG00000015490) #31	ALOX5AP (ENSOGAG00000015495) #32	MEDAG (ENSOGAG00000034882) #33	TEX26 (ENSOGAG00000006834) #34	HSPH1 (ENSOGAG00000009898) #36
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b ##11	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35
Eulipotyphla	ANCESTRAL SPECIES	1148																ENSGT00390000001504 #22	ENSGT00940000158713 #23
Common shrew	MODERN SPECIES	3681																PAN3 (ENSSARG00000012201) #22
Hedgehog	MODERN SPECIES	4760																PAN3 (ENSEEUG00000014833) #22	FLT1 (ENSEEUG00000014914) #23
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Suina	ANCESTRAL SPECIES	29	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00950000182922.a.a.a.b.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Chacoan peccary	MODERN SPECIES	216	GPR12 (ENSCWAG00000018600) #9	ENSCWAG00000018581	USP12 (ENSCWAG00000018548) #10	RPL21 (ENSCWAG00000018513) ##11	RASL11A (ENSCWAG00000018481) #12	ENSCWAG00000018472	GTF3A (ENSCWAG00000018454) #13	MTIF3 (ENSCWAG00000018433) #14	LNX2 (ENSCWAG00000018415) #15	POLR1D (ENSCWAG00000018355) #16	GSX1 (ENSCWAG00000018331) #17	PDX1 (ENSCWAG00000018319) #18	CDX2 (ENSCWAG00000018265) #19	URAD (ENSCWAG00000018244) #20	FLT3 (ENSCWAG00000018108) #21	PAN3 (ENSCWAG00000018033) #22	FLT1 (ENSCWAG00000017867) #23	ENSCWAG00000017809	POMP (ENSCWAG00000017771) #24	SLC46A3 (ENSCWAG00000017732) #25	MTUS2 (ENSCWAG00000017501) #26	SLC7A1 (ENSCWAG00000017449) #27	UBL3 (ENSCWAG00000017400) #28	KATNAL1 (ENSCWAG00000017366) #29	HMGB1 (ENSCWAG00000017323) #30	USPL1 (ENSCWAG00000017300) #31	ALOX5AP (ENSCWAG00000017261) #32	MEDAG (ENSCWAG00000017233) #33	TEX26 (ENSCWAG00000017184) #34	ENSCWAG00000017090 #35	HSPH1 (ENSCWAG00000016864) #36
Pig	MODERN SPECIES	2	WASF3 (ENSSSCG00000009300)	ENSSSCG00000042074	GPR12 (ENSSSCG00000009301) #9	USP12 (ENSSSCG00000009302) #10	ENSSSCG00000009303 ##11	RASL11A (ENSSSCG00000039890) #12	GTF3A (ENSSSCG00000009305) #13	MTIF3 (ENSSSCG00000037313) #14	LNX2 (ENSSSCG00000009308) #15	POLR1D (ENSSSCG00000009310) #16	GSX1 (ENSSSCG00000009313) #17	PDX1 (ENSSSCG00000055811) #18	CDX2 (ENSSSCG00000009317) #19	ENSSSCG00000009316	FLT3 (ENSSSCG00000009314) #21	PAN3 (ENSSSCG00000009319) #22	FLT1 (ENSSSCG00000009320) #23	POMP (ENSSSCG00000037170) #24	SLC46A3 (ENSSSCG00000009322) #25	MTUS2 (ENSSSCG00000025996) #26	SLC7A1 (ENSSSCG00000029456) #27	ENSSSCG00000035992 #28	KATNAL1 (ENSSSCG00000009326) #29	ENSSSCG00000009327 ##30	USPL1 (ENSSSCG00000028065) #31	ALOX5AP (ENSSSCG00000009330) #32	MEDAG (ENSSSCG00000009331) #33	TEX26 (ENSSSCG00000046261) #34	ENSSSCG00000009333 #35	HSPH1 (ENSSSCG00000009334) #36	B3GLCT (ENSSSCG00000009335) #37
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Camelidae	ANCESTRAL SPECIES	14	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37	ENSGT00940000158948.b
Alpaca	MODERN SPECIES	137															FLT3 (ENSVPAG00000006354) #21	PAN3 (ENSVPAG00000006357) #22	FLT1 (ENSVPAG00000006361) #23
Arabian camel	MODERN SPECIES	5	CDK8 (ENSCDRG00005021779)	WASF3 (ENSCDRG00005021785)	GPR12 (ENSCDRG00005021787) #9	USP12 (ENSCDRG00005021790) #10	ENSCDRG00005021795 ##11	RASL11A (ENSCDRG00005021802) #12	GTF3A (ENSCDRG00005021807) #13	MTIF3 (ENSCDRG00005003341) #14	LNX2 (ENSCDRG00005003360) #15	POLR1D (ENSCDRG00005003401) #16	GSX1 (ENSCDRG00005003464) #17	PDX1 (ENSCDRG00005003496) #18	ENSCDRG00005003530 #19	ENSCDRG00005003574	FLT3 (ENSCDRG00005003607) #21	PAN3 (ENSCDRG00005003669) #22	FLT1 (ENSCDRG00005003978) #23	POMP (ENSCDRG00005004772) #24	SLC46A3 (ENSCDRG00005004813) #25	ENSCDRG00005004864 #26	ENSCDRG00005004898 #26	SLC7A1 (ENSCDRG00005004941) #27	UBL3 (ENSCDRG00005005011) #28	KATNAL1 (ENSCDRG00005005025) #29	HMGB1 (ENSCDRG00005005045) #30	USPL1 (ENSCDRG00005005085) #31	ALOX5AP (ENSCDRG00005005116) #32	MEDAG (ENSCDRG00005005141) #33	TEX26 (ENSCDRG00005005163) #34	HSPH1 (ENSCDRG00005005202) #36	B3GLCT (ENSCDRG00005005450) #37
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Cetacea	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B.r #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B.r #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B.r #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Narwhal	MODERN SPECIES	315	WASF3 (ENSMMNG00015021063)	GPR12 (ENSMMNG00015021041) #9	USP12 (ENSMMNG00015021025) #10	ENSMMNG00015020992 ##11	RASL11A (ENSMMNG00015020985) #12	ENSMMNG00015020968	GTF3A (ENSMMNG00015020949) #13	MTIF3 (ENSMMNG00015020934) #14	LNX2 (ENSMMNG00015020919) #15	ENSMMNG00015020896	GSX1 (ENSMMNG00015020877) #17	PDX1 (ENSMMNG00015020863) #18	CDX2 (ENSMMNG00015020842) #19	URAD (ENSMMNG00015020821) #20	FLT3 (ENSMMNG00015020792) #21	PAN3 (ENSMMNG00015020615) #22	FLT1 (ENSMMNG00015020525) #23	ENSMMNG00015020477 #24	SLC46A3 (ENSMMNG00015020455) #25	MTUS2 (ENSMMNG00015020336) #26	SLC7A1 (ENSMMNG00015020307) #27	UBL3 (ENSMMNG00015020289) #28	KATNAL1 (ENSMMNG00015020263) #29	HMGB1 (ENSMMNG00015020245) #30	USPL1 (ENSMMNG00015020212) #31	ALOX5AP (ENSMMNG00015020175) #32	MEDAG (ENSMMNG00015020156) #33	HSPH1 (ENSMMNG00015020078) #36	B3GLCT (ENSMMNG00015019951) #37	RXFP2 (ENSMMNG00015019687)	FRY (ENSMMNG00015019379)
Beluga whale	MODERN SPECIES	29	WASF3 (ENSDLEG00000014723)	GPR12 (ENSDLEG00000014734) #9	USP12 (ENSDLEG00000014742) #10	RPL21 (ENSDLEG00000014757) ##11	RASL11A (ENSDLEG00000014782) #12	GTF3A (ENSDLEG00000014795) #13	MTIF3 (ENSDLEG00000014809) #14	LNX2 (ENSDLEG00000014818) #15	POLR1D (ENSDLEG00000014833) #16	ENSDLEG00000014844	GSX1 (ENSDLEG00000014854) #17	PDX1 (ENSDLEG00000014860) #18	CDX2 (ENSDLEG00000014871) #19	ENSDLEG00000014887	FLT3 (ENSDLEG00000014957) #21	PAN3 (ENSDLEG00000015462) #22	FLT1 (ENSDLEG00000015551) #23	ENSDLEG00000015594 #24	SLC46A3 (ENSDLEG00000015606) #25	ENSDLEG00000015614	MTUS2 (ENSDLEG00000015621) #26	SLC7A1 (ENSDLEG00000015661) #27	UBL3 (ENSDLEG00000015684) #28	KATNAL1 (ENSDLEG00000015700) #29	HMGB1 (ENSDLEG00000005222) ##30	USPL1 (ENSDLEG00000005228) #31	ALOX5AP (ENSDLEG00000005233) #32	MEDAG (ENSDLEG00000005244) #33	ENSDLEG00000005251 #35	HSPH1 (ENSDLEG00000005268) #36	B3GLCT (ENSDLEG00000005311) #37
Vaquita	MODERN SPECIES	9	WASF3 (ENSPSNG00000009017)	ENSPSNG00000009063	GPR12 (ENSPSNG00000009076) #9	USP12 (ENSPSNG00000009102) #10	ENSPSNG00000009136 ##11	RASL11A (ENSPSNG00000009220) #12	GTF3A (ENSPSNG00000009270) #13	MTIF3 (ENSPSNG00000009318) #14	LNX2 (ENSPSNG00000009360) #15	ENSPSNG00000009434 #16	GSX1 (ENSPSNG00000009508) #17	PDX1 (ENSPSNG00000009545) #18	CDX2 (ENSPSNG00000009587) #19	URAD (ENSPSNG00000009637) #20	FLT3 (ENSPSNG00000009789) #21	PAN3 (ENSPSNG00000010591) #22	FLT1 (ENSPSNG00000010996) #23	ENSPSNG00000011404	ENSPSNG00000011451 #24	SLC46A3 (ENSPSNG00000011519) #25	ENSPSNG00000011610	ENSPSNG00000011712 #26	SLC7A1 (ENSPSNG00000011868) #27	UBL3 (ENSPSNG00000011923) #28	KATNAL1 (ENSPSNG00000011976) #29	HMGB1 (ENSPSNG00000012042) #30	USPL1 (ENSPSNG00000012125) #31	ALOX5AP (ENSPSNG00000012197) #32	ENSPSNG00000011745	MEDAG (ENSPSNG00000011804) #33	HSPH1 (ENSPSNG00000011882) #36
Dolphin	MODERN SPECIES	632													PDX1 (ENSTTRG00000002811) #18	URAD (ENSTTRG00000002812) #20	FLT3 (ENSTTRG00000002813) #21	PAN3 (ENSTTRG00000002814) #22
Sperm whale	MODERN SPECIES	4	WASF3 (ENSPCTG00005012829)	GPR12 (ENSPCTG00005012894) #9	ENSPCTG00005012908	USP12 (ENSPCTG00005012963) #10	RPL21 (ENSPCTG00005013013) ##11	RASL11A (ENSPCTG00005013101) #12	GTF3A (ENSPCTG00005013180) #13	MTIF3 (ENSPCTG00005013236) #14	LNX2 (ENSPCTG00005013292) #15	POLR1D (ENSPCTG00005013390) #16	GSX1 (ENSPCTG00005013569) #17	PDX1 (ENSPCTG00005013620) #18	CDX2 (ENSPCTG00005013676) #19	ENSPCTG00005013732	FLT3 (ENSPCTG00005013790) #21	PAN3 (ENSPCTG00005014160) #22	FLT1 (ENSPCTG00005014294) #23	POMP (ENSPCTG00005014527) #24	SLC46A3 (ENSPCTG00005014585) #25	ENSPCTG00005014618	MTUS2 (ENSPCTG00005014659) #26	SLC7A1 (ENSPCTG00005014850) #27	UBL3 (ENSPCTG00005014919) #28	KATNAL1 (ENSPCTG00005014985) #29	HMGB1 (ENSPCTG00005015034) #30	USPL1 (ENSPCTG00005015111) #31	ALOX5AP (ENSPCTG00005015171) #32	MEDAG (ENSPCTG00005015216) #33	TEX26 (ENSPCTG00005015295) #34	HSPH1 (ENSPCTG00005015496) #36	B3GLCT (ENSPCTG00005016496) #37
Blue whale	MODERN SPECIES	9	WASF3 (ENSBMSG00010014112)	GPR12 (ENSBMSG00010014207) #9	USP12 (ENSBMSG00010014225) #10	ENSBMSG00010014255 ##11	RASL11A (ENSBMSG00010014298) #12	ENSBMSG00010014311	GTF3A (ENSBMSG00010014329) #13	MTIF3 (ENSBMSG00010014375) #14	LNX2 (ENSBMSG00010014414) #15	ENSBMSG00010014466 #16	GSX1 (ENSBMSG00010014529) #17	PDX1 (ENSBMSG00010014538) #18	CDX2 (ENSBMSG00010014566) #19	URAD (ENSBMSG00010014592) #20	FLT3 (ENSBMSG00010014623) #21	PAN3 (ENSBMSG00010014764) #22	FLT1 (ENSBMSG00010014949) #23	ENSBMSG00010015155 #24	SLC46A3 (ENSBMSG00010015191) #25	ENSBMSG00010015221	ENSBMSG00010015247 #26	SLC7A1 (ENSBMSG00010015357) #27	UBL3 (ENSBMSG00010015451) #28	KATNAL1 (ENSBMSG00010015496) #29	HMGB1 (ENSBMSG00010015522) #30	USPL1 (ENSBMSG00010015554) #31	ALOX5AP (ENSBMSG00010015580) #32	MEDAG (ENSBMSG00010015612) #33	TEX26 (ENSBMSG00010015652) #34	ENSBMSG00010015688 #35	HSPH1 (ENSBMSG00010015771) #36
Pecora	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Yarkand deer	MODERN SPECIES	23	GPR12 (ENSCHYG00000019276) #9	USP12 (ENSCHYG00000019156) #10	ENSCHYG00000019062 ##11	RASL11A (ENSCHYG00000019009) #12	ENSCHYG00000018814 #13	MTIF3 (ENSCHYG00000018756) #14	LNX2 (ENSCHYG00000018648) #15	ENSCHYG00000018627	ENSCHYG00000018475 #16	GSX1 (ENSCHYG00000018439) #17	PDX1 (ENSCHYG00000018394) #18	CDX2 (ENSCHYG00000018350) #19	URAD (ENSCHYG00000018294) #20	FLT3 (ENSCHYG00000017983) #21	ENSCHYG00000017919	PAN3 (ENSCHYG00000017249) #22	FLT1 (ENSCHYG00000016765) #23	ENSCHYG00000016696	ENSCHYG00000016630 #24	SLC46A3 (ENSCHYG00000016561) #25	MTUS2 (ENSCHYG00000016049) #26	SLC7A1 (ENSCHYG00000015804) #27	UBL3 (ENSCHYG00000015723) #28	KATNAL1 (ENSCHYG00000015536) #29	ENSCHYG00000015436 ##30	USPL1 (ENSCHYG00000015344) #31	ALOX5AP (ENSCHYG00000015250) #32	ENSCHYG00000015226	MEDAG (ENSCHYG00000015182) #33	TEX26 (ENSCHYG00000015069) #34	ENSCHYG00000014786 #35
Percora_a	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Siberian musk deer	MODERN SPECIES	18	WASF3 (ENSMMSG00000003196)	GPR12 (ENSMMSG00000003186) #9	USP12 (ENSMMSG00000003167) #10	ENSMMSG00000003141 ##11	RASL11A (ENSMMSG00000003132) #12	ENSMMSG00000003107 #13	MTIF3 (ENSMMSG00000003094) #14	LNX2 (ENSMMSG00000003075) #15	POLR1D (ENSMMSG00000003040) #16	GSX1 (ENSMMSG00000003020) #17	ENSMMSG00000003007	PDX1 (ENSMMSG00000002992) #18	CDX2 (ENSMMSG00000002973) #19	URAD (ENSMMSG00000002960) #20	FLT3 (ENSMMSG00000002901) #21	PAN3 (ENSMMSG00000002825) #22	FLT1 (ENSMMSG00000002716) #23	ENSMMSG00000002681 #24	SLC46A3 (ENSMMSG00000002652) #25	MTUS2 (ENSMMSG00000002573) #26	SLC7A1 (ENSMMSG00000002527) #27	UBL3 (ENSMMSG00000002504) #28	KATNAL1 (ENSMMSG00000002485) #29	ENSMMSG00000002453 ##30	USPL1 (ENSMMSG00000002424) #31	ALOX5AP (ENSMMSG00000002405) #32	MEDAG (ENSMMSG00000002386) #33	TEX26 (ENSMMSG00000002369) #34	HSPH1 (ENSMMSG00000002127) #36	B3GLCT (ENSMMSG00000002053) #37	RXFP2 (ENSMMSG00000001942)
Bovidae	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f.e.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Bovinae	ANCESTRAL SPECIES	29	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f.e.a.a ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Bos	ANCESTRAL SPECIES	28	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f.e.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Bos_b	ANCESTRAL SPECIES	33	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f.e.a.a ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT01100000263481.n.a.b.b.a.b.b.a.a.b.a.b	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Hybrid Bos Indicus	MODERN SPECIES	3	CDK8 (ENSBIXG00005009401)	WASF3 (ENSBIXG00005009436)	GPR12 (ENSBIXG00005005366) #9	USP12 (ENSBIXG00005000510) #10	ENSBIXG00005009506 ##11	RASL11A (ENSBIXG00005009524) #12	MTIF3 (ENSBIXG00005000533) #14	ENSBIXG00005009581 #13	LNX2 (ENSBIXG00005009616) #15	POLR1D (ENSBIXG00005009666) #16	GSX1 (ENSBIXG00005009693) #17	PDX1 (ENSBIXG00005005368) #18	CDX2 (ENSBIXG00005000565) #19	ENSBIXG00005000568	FLT3 (ENSBIXG00005005466) #21	PAN3 (ENSBIXG00005005472) #22	FLT1 (ENSBIXG00005010159) #23	POMP (ENSBIXG00005010225) #24	SLC46A3 (ENSBIXG00005000810) #25	MTUS2 (ENSBIXG00005010291) #26	SLC7A1 (ENSBIXG00005006772) #27	UBL3 (ENSBIXG00005010348) #28	ENSBIXG00005000793	KATNAL1 (ENSBIXG00005000876) #29	ENSBIXG00005006774	ENSBIXG00005010515 ##30	USPL1 (ENSBIXG00005010560) #31	ALOX5AP (ENSBIXG00005000697) #32	MEDAG (ENSBIXG00005010602) #33	TEX26 (ENSBIXG00005010612) #34	ENSBIXG00005000923 #35
Cow	MODERN SPECIES	3	WASF3 (ENSBTAG00000014619)	GPR12 (ENSBTAG00000010769) #9	USP12 (ENSBTAG00000017179) #10	RPL21 (ENSBTAG00000001648) ##11	RASL11A (ENSBTAG00000005244) #12	GTF3A (ENSBTAG00000012600) #13	MTIF3 (ENSBTAG00000020530) #14	LNX2 (ENSBTAG00000015614) #15	POLR1D (ENSBTAG00000008642) #16	ENSBTAG00000048386	GSX1 (ENSBTAG00000009166) #17	PDX1 (ENSBTAG00000010690) #18	CDX2 (ENSBTAG00000001819) #19	URAD (ENSBTAG00000013819)	FLT3 (ENSBTAG00000018572) #21	PAN3 (ENSBTAG00000009912) #22	FLT1 (ENSBTAG00000016915) #23	POMP (ENSBTAG00000014024) #24	MTUS2 (ENSBTAG00000001094) #26	SLC7A1 (ENSBTAG00000018577) #27	UBL3 (ENSBTAG00000012170) #28	ENSBTAG00000052411	KATNAL1 (ENSBTAG00000009340) #29	HMGB1 (ENSBTAG00000018103) #30	USPL1 (ENSBTAG00000001178) #31	ALOX5AP (ENSBTAG00000013201) #32	MEDAG (ENSBTAG00000008271) #33	TEX26 (ENSBTAG00000033386) #34	ENSBTAG00000016052 #35	HSPH1 (ENSBTAG00000005012) #36	B3GLCT (ENSBTAG00000033412) #37
Bos_a	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f.e.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00940000154361.A #17	ENSGT00390000003643	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Domestic yak	MODERN SPECIES	6	ENSBGRG00000004746	USP12 (ENSBGRG00000004775) #10	ENSBGRG00000004884 ##11	RASL11A (ENSBGRG00000004923) #12	GTF3A (ENSBGRG00000004973) #13	MTIF3 (ENSBGRG00000005098) #14	LNX2 (ENSBGRG00000005122) #15	ENSBGRG00000005177	GSX1 (ENSBGRG00000005224) #17	ENSBGRG00000005241	ENSBGRG00000005252	PDX1 (ENSBGRG00000005259) #18	CDX2 (ENSBGRG00000005271) #19	ENSBGRG00000005297	FLT3 (ENSBGRG00000005369) #21	PAN3 (ENSBGRG00000005813) #22	ENSBGRG00000006167	ENSBGRG00000006327 #23	POMP (ENSBGRG00000006553) #24	SLC46A3 (ENSBGRG00000006624) #25	MTUS2 (ENSBGRG00000006670) #26	SLC7A1 (ENSBGRG00000006751) #27	UBL3 (ENSBGRG00000006856) #28	KATNAL1 (ENSBGRG00000006924) #29	ENSBGRG00000007092 ##30	ENSBGRG00000007221	USPL1 (ENSBGRG00000007239) #31	ALOX5AP (ENSBGRG00000007328) #32	MEDAG (ENSBGRG00000007441) #33	TEX26 (ENSBGRG00000007537) #34	ENSBGRG00000007607 #35
Wild yak	MODERN SPECIES	1371															FLT3 (ENSBMUG00000023185) #21	PAN3 (ENSBMUG00000023150) #22	FLT1 (ENSBMUG00000023081) #23	POMP (ENSBMUG00000023007) #24	SLC46A3 (ENSBMUG00000023002) #25	MTUS2 (ENSBMUG00000022991) #26	SLC7A1 (ENSBMUG00000022964) #27	UBL3 (ENSBMUG00000022941) #28	KATNAL1 (ENSBMUG00000022930) #29	HMGB1 (ENSBMUG00000022917) #30	USPL1 (ENSBMUG00000022880) #31	ALOX5AP (ENSBMUG00000022869) #32	MEDAG (ENSBMUG00000022857) #33	TEX26 (ENSBMUG00000022841) #34	ENSBMUG00000022823 #35	HSPH1 (ENSBMUG00000022797) #36	ENSBMUG00000022779
American bison	MODERN SPECIES	3213	WASF3 (ENSBBBG00000002463)	GPR12 (ENSBBBG00000012732) #9	USP12 (ENSBBBG00000002455) #10	ENSBBBG00000012692 ##11	RASL11A (ENSBBBG00000007545) #12	GTF3A (ENSBBBG00000012669) #13	ENSBBBG00000012643 #14	LNX2 (ENSBBBG00000012639) #15	POLR1D (ENSBBBG00000012618) #16	ENSBBBG00000012613	GSX1 (ENSBBBG00000001841) #17	PDX1 (ENSBBBG00000001839) #18	ENSBBBG00000012601 #19	URAD (ENSBBBG00000008107) #20	FLT3 (ENSBBBG00000012586) #21	PAN3 (ENSBBBG00000012554) #22	FLT1 (ENSBBBG00000012485) #23	POMP (ENSBBBG00000002357) #24	SLC46A3 (ENSBBBG00000012388) #25
Caprinae	ANCESTRAL SPECIES	28	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f.e.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424.g #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643.k	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36	ENSGT00940000155499 #37
Goat	MODERN SPECIES	3	WASF3 (ENSCHIG00000017657)	GPR12 (ENSCHIG00000007944) #9	USP12 (ENSCHIG00000006817) #10	RPL21 (ENSCHIG00000021720) ##11	RASL11A (ENSCHIG00000016902) #12	ENSCHIG00000021040 #13	ENSCHIG00000026996 #14	LNX2 (ENSCHIG00000024542) #15	POLR1D (ENSCHIG00000021910) #16	ENSCHIG00000014902	GSX1 (ENSCHIG00000026107) #17	PDX1 (ENSCHIG00000016212) #18	CDX2 (ENSCHIG00000024755) #19	ENSCHIG00000015696	FLT3 (ENSCHIG00000006089) #21	PAN3 (ENSCHIG00000010876) #22	FLT1 (ENSCHIG00000019587) #23	ENSCHIG00000007021 #24	SLC46A3 (ENSCHIG00000006252) #25	MTUS2 (ENSCHIG00000014951) #26	SLC7A1 (ENSCHIG00000017131) #27	UBL3 (ENSCHIG00000005881) #28	KATNAL1 (ENSCHIG00000011417) #29	HMGB1 (ENSCHIG00000018473) #30	USPL1 (ENSCHIG00000025535) #31	ALOX5AP (ENSCHIG00000020532) #32	MEDAG (ENSCHIG00000019733) #33	TEX26 (ENSCHIG00000013376) #34	HSPH1 (ENSCHIG00000003518) #36	B3GLCT (ENSCHIG00000016248) #37	RXFP2 (ENSCHIG00000007689)
Rambouillet Sheep	MODERN SPECIES	1	GPR12 (ENSOARG00020012619) #9	USP12 (ENSOARG00020012488) #10	ENSOARG00020012435	ENSOARG00020012335 ##11	RASL11A (ENSOARG00020012287) #12	ENSOARG00020012160 #13	ENSOARG00020012106 #13	MTIF3 (ENSOARG00020012058) #14	LNX2 (ENSOARG00020012002) #15	POLR1D (ENSOARG00020011900) #16	GSX1 (ENSOARG00020011857) #17	PDX1 (ENSOARG00020011821) #18	CDX2 (ENSOARG00020011783) #19	URAD (ENSOARG00020011747) #20	FLT3 (ENSOARG00020011519) #21	PAN3 (ENSOARG00020010540) #22	FLT1 (ENSOARG00020010103) #23	ENSOARG00020010005 #24	SLC46A3 (ENSOARG00020009919) #25	ENSOARG00020009812 #26	SLC7A1 (ENSOARG00020009646) #27	UBL3 (ENSOARG00020009591) #28	KATNAL1 (ENSOARG00020009464) #29	HMGB1 (ENSOARG00020009396) #30	ALOX5AP (ENSOARG00020009284) #32	MEDAG (ENSOARG00020009224) #33	TEX26 (ENSOARG00020009149) #34	ENSOARG00020008926 #35	HSPH1 (ENSOARG00020008491) #36	B3GLCT (ENSOARG00020008264) #37	ENSOARG00020008205
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Equus	ANCESTRAL SPECIES	26	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Donkey	MODERN SPECIES	29	GPR12 (ENSEASG00005035884) #9	USP12 (ENSEASG00005022511) #10	ENSEASG00005022501 ##11	RASL11A (ENSEASG00005034471) #12	ENSEASG00005022495 #13	MTIF3 (ENSEASG00005022492) #14	LNX2 (ENSEASG00005022490) #15	POLR1D (ENSEASG00005022487) #16	ENSEASG00005035501	GSX1 (ENSEASG00005022483) #17	PDX1 (ENSEASG00005022482) #18	CDX2 (ENSEASG00005022479) #19	ENSEASG00005028208	ENSEASG00005003450	FLT3 (ENSEASG00005022471) #21	PAN3 (ENSEASG00005022467) #22	ENSEASG00005029804	ENSEASG00005022461 #23	ENSEASG00005029421 #24	SLC46A3 (ENSEASG00005022457) #25	MTUS2 (ENSEASG00005022449) #26	SLC7A1 (ENSEASG00005022432) #27	UBL3 (ENSEASG00005022423) #28	KATNAL1 (ENSEASG00005022416) #29	HMGB1 (ENSEASG00005032345) #30	USPL1 (ENSEASG00005022400) #31	ALOX5AP (ENSEASG00005022395) #32	MEDAG (ENSEASG00005022391) #33	TEX26 (ENSEASG00005022387) #34	ENSEASG00005022381 #35	HSPH1 (ENSEASG00005022374) #36
Horse	MODERN SPECIES	8	WASF3 (ENSECAG00000000050)	GPR12 (ENSECAG00000059623) #9	ENSECAG00000036907	ENSECAG00000045376	USP12 (ENSECAG00000006779) #10	RASL11A (ENSECAG00000012858) #12	GTF3A (ENSECAG00000014803) #13	MTIF3 (ENSECAG00000016697) #14	LNX2 (ENSECAG00000017219) #15	ENSECAG00000021095	GSX1 (ENSECAG00000035168) #17	PDX1 (ENSECAG00000000679) #18	CDX2 (ENSECAG00000027754) #19	ENSECAG00000002049	FLT3 (ENSECAG00000002171) #21	PAN3 (ENSECAG00000014810) #22	FLT1 (ENSECAG00000021700)	ENSECAG00000049171 #23	POMP (ENSECAG00000011951) #24	ENSECAG00000048907	SLC46A3 (ENSECAG00000011432) #25	MTUS2 (ENSECAG00000013935) #26	SLC7A1 (ENSECAG00000015413) #27	UBL3 (ENSECAG00000001318) #28	KATNAL1 (ENSECAG00000004830) #29	HMGB1 (ENSECAG00000008439) ##30	USPL1 (ENSECAG00000011889) #31	ALOX5AP (ENSECAG00000012371) #32	MEDAG (ENSECAG00000014702) #33	TEX26 (ENSECAG00000015300) #34	ENSECAG00000016853 #35
Chiroptera	ANCESTRAL SPECIES	66	ENSGT00940000157104.m.a	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37	ENSGT00940000158948.b
Megabat	MODERN SPECIES	1410																PAN3 (ENSPVAG00000001113) #22	FLT1 (ENSPVAG00000001114) #23
Microchiroptera	ANCESTRAL SPECIES	46	ENSGT00940000157104.m.a	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b.f ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37	ENSGT00940000158948.b
Greater horseshoe bat	MODERN SPECIES	22	ENSRFEG00010003754	GPR12 (ENSRFEG00010003761) #9	USP12 (ENSRFEG00010003775) #10	ENSRFEG00010003789 ##11	RASL11A (ENSRFEG00010003821) #12	GTF3A (ENSRFEG00010003845) #13	MTIF3 (ENSRFEG00010003873) #14	LNX2 (ENSRFEG00010003884) #15	ENSRFEG00010003922 #16	ENSRFEG00010003942	GSX1 (ENSRFEG00010003946) #17	PDX1 (ENSRFEG00010003956) #18	CDX2 (ENSRFEG00010003965) #19	ENSRFEG00010003975	FLT3 (ENSRFEG00010004003) #21	PAN3 (ENSRFEG00010004077) #22	FLT1 (ENSRFEG00010004193) #23	ENSRFEG00010004318 #24	SLC46A3 (ENSRFEG00010004332) #25	MTUS2 (ENSRFEG00010004361) #26	ENSRFEG00010004420 ##30	SLC7A1 (ENSRFEG00010000293) #27	UBL3 (ENSRFEG00010000414) #28	KATNAL1 (ENSRFEG00010000476) #29	HMGB1 (ENSRFEG00010000531) #30	USPL1 (ENSRFEG00010000567) #31	ALOX5AP (ENSRFEG00010000601) #32	MEDAG (ENSRFEG00010000622) #33	TEX26 (ENSRFEG00010000643) #34	HSPH1 (ENSRFEG00010000709) #36	B3GLCT (ENSRFEG00010000860) #37
Microbat	MODERN SPECIES	1164				GPR12 (ENSMLUG00000002365) #9	USP12 (ENSMLUG00000007510) #10	ENSMLUG00000010093 ##11	RASL11A (ENSMLUG00000016335) #12	GTF3A (ENSMLUG00000002158) #13	MTIF3 (ENSMLUG00000002161) #14	LNX2 (ENSMLUG00000010946) #15	ENSMLUG00000025151	PDX1 (ENSMLUG00000010639) #18	CDX2 (ENSMLUG00000002563) #19	ENSMLUG00000002576	FLT3 (ENSMLUG00000002582) #21	PAN3 (ENSMLUG00000004348) #22	FLT1 (ENSMLUG00000004358) #23	ENSMLUG00000010322 #24	SLC46A3 (ENSMLUG00000006699) #25
Carnivora	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35
Felidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Panthera	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00950000182922.a.a.a.b.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00950000182922.a.a.a.b.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
leopard	MODERN SPECIES	14	CDK8 (ENSPPRG00000023432)	WASF3 (ENSPPRG00000022988)	GPR12 (ENSPPRG00000017596) #9	USP12 (ENSPPRG00000000510) #10	ENSPPRG00000001012 ##11	RASL11A (ENSPPRG00000001350) #12	GTF3A (ENSPPRG00000002368) #13	MTIF3 (ENSPPRG00000002497) #14	LNX2 (ENSPPRG00000002783) #15	POLR1D (ENSPPRG00000003381) #16	GSX1 (ENSPPRG00000004333) #17	PDX1 (ENSPPRG00000004534) #18	CDX2 (ENSPPRG00000004823) #19	ENSPPRG00000005097	FLT3 (ENSPPRG00000005326) #21	PAN3 (ENSPPRG00000008505) #22	ENSPPRG00000011363	ENSPPRG00000013104 #23	POMP (ENSPPRG00000013840) #24	SLC46A3 (ENSPPRG00000015693) #25	ENSPPRG00000016401 #26	SLC7A1 (ENSPPRG00000017628) #27	UBL3 (ENSPPRG00000019662) #28	KATNAL1 (ENSPPRG00000022045) #29	HMGB1 (ENSPPRG00000022869) #30	USPL1 (ENSPPRG00000000053) #31	ALOX5AP (ENSPPRG00000000293) #32	MEDAG (ENSPPRG00000000734) #33	TEX26 (ENSPPRG00000001047) #34	ENSPPRG00000002151 #35	HSPH1 (ENSPPRG00000005057) #36
lion	MODERN SPECIES	1	CDK8 (ENSPLOG00000004108)	WASF3 (ENSPLOG00000004088)	GPR12 (ENSPLOG00000004075) #9	USP12 (ENSPLOG00000004064) #10	ENSPLOG00000021394 ##11	RASL11A (ENSPLOG00000021369) #12	GTF3A (ENSPLOG00000021339) #13	MTIF3 (ENSPLOG00000021318) #14	LNX2 (ENSPLOG00000021288) #15	ENSPLOG00000021249	GSX1 (ENSPLOG00000021227) #17	PDX1 (ENSPLOG00000021216) #18	CDX2 (ENSPLOG00000021193) #19	URAD (ENSPLOG00000021175) #20	FLT3 (ENSPLOG00000021081) #21	PAN3 (ENSPLOG00000020895) #22	FLT1 (ENSPLOG00000020410) #23	POMP (ENSPLOG00000020240) #24	SLC46A3 (ENSPLOG00000020203) #25	ENSPLOG00000020066 #26	SLC7A1 (ENSPLOG00000020023) #27	UBL3 (ENSPLOG00000019992) #28	KATNAL1 (ENSPLOG00000019942) #29	ENSPLOG00000019888 ##30	USPL1 (ENSPLOG00000019841) #31	ALOX5AP (ENSPLOG00000019807) #32	MEDAG (ENSPLOG00000019748) #33	TEX26 (ENSPLOG00000019557) #34	ENSPLOG00000019458 #35	HSPH1 (ENSPLOG00000019185) #36	B3GLCT (ENSPLOG00000019047) #37
Tiger	MODERN SPECIES	38	CDK8 (ENSPTIG00000021301)	WASF3 (ENSPTIG00000020649)	GPR12 (ENSPTIG00000005107) #9	USP12 (ENSPTIG00000020368) #10	ENSPTIG00000020228 ##11	RASL11A (ENSPTIG00000019926) #12	GTF3A (ENSPTIG00000018958) #13	MTIF3 (ENSPTIG00000018642) #14	LNX2 (ENSPTIG00000018500) #15	POLR1D (ENSPTIG00000018137) #16	ENSPTIG00000017320	GSX1 (ENSPTIG00000016369) #17	ENSPTIG00000016324	ENSPTIG00000014998 #19	FLT3 (ENSPTIG00000013522) #21	PAN3 (ENSPTIG00000011675) #22	ENSPTIG00000010147	ENSPTIG00000007575 #23	POMP (ENSPTIG00000007181) #24	SLC46A3 (ENSPTIG00000005724) #25	ENSPTIG00000001385 #26	SLC7A1 (ENSPTIG00000021015) #27	UBL3 (ENSPTIG00000020762) #28	KATNAL1 (ENSPTIG00000020391) #29	ENSPTIG00000020002 ##30	USPL1 (ENSPTIG00000019771) #31	ALOX5AP (ENSPTIG00000019272) #32	MEDAG (ENSPTIG00000018319) #33	TEX26 (ENSPTIG00000017363) #34	ENSPTIG00000016067 #35	HSPH1 (ENSPTIG00000013145) #36
Cat	MODERN SPECIES		CDK8 (ENSFCAG00000027073)	WASF3 (ENSFCAG00000009474)	GPR12 (ENSFCAG00000014524) #9	USP12 (ENSFCAG00000026620) #10	ENSFCAG00000006750 ##11	RASL11A (ENSFCAG00000006749) #12	GTF3A (ENSFCAG00000006982) #13	MTIF3 (ENSFCAG00000006985) #14	LNX2 (ENSFCAG00000011821) #15	ENSFCAG00000030162	GSX1 (ENSFCAG00000026793) #17	PDX1 (ENSFCAG00000034557) #18	CDX2 (ENSFCAG00000026699) #19	ENSFCAG00000036126	FLT3 (ENSFCAG00000004539) #21	PAN3 (ENSFCAG00000018643) #22	FLT1 (ENSFCAG00000013299) #23	POMP (ENSFCAG00000008235) #24	SLC46A3 (ENSFCAG00000008236) #25	MTUS2 (ENSFCAG00000014322) #26	SLC7A1 (ENSFCAG00000014326) #27	UBL3 (ENSFCAG00000027217) #28	KATNAL1 (ENSFCAG00000032001) #29	HMGB1 (ENSFCAG00000000200) #30	USPL1 (ENSFCAG00000022053) #31	ALOX5AP (ENSFCAG00000037195) #32	MEDAG (ENSFCAG00000007544) #33	TEX26 (ENSFCAG00000024146) #34	ENSFCAG00000031325 #35	HSPH1 (ENSFCAG00000007547) #36	B3GLCT (ENSFCAG00000018185) #37
Caniformia	ANCESTRAL SPECIES	24	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35
Canidae	ANCESTRAL SPECIES	31	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000153229.A.b #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.a.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00940000153425.a.a.b.a	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00390000011067.A.ib.b	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.a.b.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00940000153425.a.a.b.a	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35
Dog	MODERN SPECIES	17	GPR12 (ENSCAFG00845026068) #9	ENSCAFG00845026031	USP12 (ENSCAFG00845025960) #10	RPL21 (ENSCAFG00845025858) ##11	RASL11A (ENSCAFG00845025821) #12	GTF3A (ENSCAFG00845025723) #13	MTIF3 (ENSCAFG00845025671) #14	LNX2 (ENSCAFG00845025569) #15	POLR1D (ENSCAFG00845025499)	GSX1 (ENSCAFG00845025440) #17	PDX1 (ENSCAFG00845025401) #18	CDX2 (ENSCAFG00845025357) #19	ENSCAFG00845025288	ENSCAFG00845025235	FLT3 (ENSCAFG00845024412) #21	PAN3 (ENSCAFG00845023866) #22	FLT1 (ENSCAFG00845023188) #23	POMP (ENSCAFG00845022887) #24	SLC46A3 (ENSCAFG00845022832) #25	MTUS2 (ENSCAFG00845022435) #26	SLC7A1 (ENSCAFG00845022314) #27	ENSCAFG00845022280	UBL3 (ENSCAFG00845022214) #28	ENSCAFG00845022193	KATNAL1 (ENSCAFG00845022093) #29	HMGB1 (ENSCAFG00845021967) #30	USPL1 (ENSCAFG00845021869) #31	ALOX5AP (ENSCAFG00845021804) #32	MEDAG (ENSCAFG00845021735) #33	TEX26 (ENSCAFG00845021671) #34	ENSCAFG00845021368 #35
Dingo	MODERN SPECIES	304	USP12 (ENSCAFG00020025315) #10	ENSCAFG00020025313 ##11	RASL11A (ENSCAFG00020025312) #12	ENSCAFG00020025311	ENSCAFG00020025308 #13	ENSCAFG00020025306 #13	MTIF3 (ENSCAFG00020025304) #14	LNX2 (ENSCAFG00020025302) #15	ENSCAFG00020025301 #16	GSX1 (ENSCAFG00020025299) #17	PDX1 (ENSCAFG00020025298) #18	CDX2 (ENSCAFG00020025296) #19	ENSCAFG00020025291	ENSCAFG00020025290	FLT3 (ENSCAFG00020025240) #21	PAN3 (ENSCAFG00020025181) #22	ENSCAFG00020025175	ENSCAFG00020025171 #23	ENSCAFG00020025170	ENSCAFG00020025169	SLC46A3 (ENSCAFG00020025168) #25	MTUS2 (ENSCAFG00020025161) #26	SLC7A1 (ENSCAFG00020025151) #27	ENSCAFG00020025149	UBL3 (ENSCAFG00020025147) #28	ENSCAFG00020025145	KATNAL1 (ENSCAFG00020025138) #29	ENSCAFG00020025137	ENSCAFG00020025133	ENSCAFG00020025123 ##30	USPL1 (ENSCAFG00020025117) #31
Red fox	MODERN SPECIES	22	GPR12 (ENSVVUG00000009138) #9	USP12 (ENSVVUG00000009179) #10	RPL21 (ENSVVUG00000009183) ##11	RASL11A (ENSVVUG00000009191) #12	GTF3A (ENSVVUG00000009197) #13	MTIF3 (ENSVVUG00000009207) #14	LNX2 (ENSVVUG00000009209) #15	POLR1D (ENSVVUG00000009216) #16	ENSVVUG00000009220	GSX1 (ENSVVUG00000009230) #17	ENSVVUG00000009233	PDX1 (ENSVVUG00000009234) #18	CDX2 (ENSVVUG00000009237) #19	FLT3 (ENSVVUG00000009247) #21	ENSVVUG00000009307 #20	PAN3 (ENSVVUG00000009313) #22	FLT1 (ENSVVUG00000009356) #23	POMP (ENSVVUG00000009398) #24	SLC46A3 (ENSVVUG00000009403) #25	MTUS2 (ENSVVUG00000009413) #26	SLC7A1 (ENSVVUG00000009439) #27	ENSVVUG00000009450	UBL3 (ENSVVUG00000009455) #28	KATNAL1 (ENSVVUG00000009499) #29	HMGB1 (ENSVVUG00000009534) #30	USPL1 (ENSVVUG00000009708) #31	ALOX5AP (ENSVVUG00000009718) #32	MEDAG (ENSVVUG00000009731) #33	TEX26 (ENSVVUG00000009744) #34	ENSVVUG00000009779 #35	HSPH1 (ENSVVUG00000010061) #36
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35
Mustelinae	ANCESTRAL SPECIES	109										ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35	ENSGT00940000159635 #36
American mink	MODERN SPECIES	346										ENSNVIG00000002786	GSX1 (ENSNVIG00000002846) #17	PDX1 (ENSNVIG00000002855) #18	CDX2 (ENSNVIG00000002864) #19	URAD (ENSNVIG00000002869) #20	FLT3 (ENSNVIG00000002880) #21	PAN3 (ENSNVIG00000002913) #22	FLT1 (ENSNVIG00000002982) #23	ENSNVIG00000003156 #24	S46A3 (ENSNVIG00000003179) #25
Ferret	MODERN SPECIES	364										ENSMPUG00000005164	GSX1 (ENSMPUG00000005153) #17	PDX1 (ENSMPUG00000005147) #18	CDX2 (ENSMPUG00000005092) #19	ENSMPUG00000005088	FLT3 (ENSMPUG00000005073) #21	PAN3 (ENSMPUG00000004987) #22	FLT1 (ENSMPUG00000004699) #23	POMP (ENSMPUG00000004690) #24	SLC46A3 (ENSMPUG00000004680) #25	ENSMPUG00000004676	MTUS2 (ENSMPUG00000004661) #26	SLC7A1 (ENSMPUG00000004649) #27	UBL3 (ENSMPUG00000004638) #28	ENSMPUG00000004620	KATNAL1 (ENSMPUG00000004610) #29	HMGB1 (ENSMPUG00000004579) #30	USPL1 (ENSMPUG00000004564) #31	ALOX5AP (ENSMPUG00000004556) #32	MEDAG (ENSMPUG00000004549) #33	TEX26 (ENSMPUG00000004539) #34	ENSMPUG00000004527
Ursidae	ANCESTRAL SPECIES	27	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Giant Panda	MODERN SPECIES	17	GPR12 (ENSAMEG00000019402) #9	ENSAMEG00000024690	USP12 (ENSAMEG00000001863) #10	RPL21 (ENSAMEG00000031074) ##11	RASL11A (ENSAMEG00000015812) #12	ENSAMEG00000029656	GTF3A (ENSAMEG00000015824) #13	MTIF3 (ENSAMEG00000015841) #14	LNX2 (ENSAMEG00000015845) #15	ENSAMEG00000028974	GSX1 (ENSAMEG00000030161) #17	PDX1 (ENSAMEG00000025378) #18	CDX2 (ENSAMEG00000029013) #19	ENSAMEG00000031229	FLT3 (ENSAMEG00000002354) #21	PAN3 (ENSAMEG00000002349) #22	FLT1 (ENSAMEG00000002209) #23	ENSAMEG00000008961 #24	SLC46A3 (ENSAMEG00000008953) #25	MTUS2 (ENSAMEG00000008934) #26	SLC7A1 (ENSAMEG00000008899) #27	UBL3 (ENSAMEG00000008894) #28	ENSAMEG00000008885 #29	ENSAMEG00000008873 #31	ALOX5AP (ENSAMEG00000023710) #32	MEDAG (ENSAMEG00000008847) #33	TEX26 (ENSAMEG00000008839) #34	ENSAMEG00000008833 #35	HSPH1 (ENSAMEG00000008784) #36	B3GLCT (ENSAMEG00000008757) #37	RXFP2 (ENSAMEG00000008702)
Ursus	ANCESTRAL SPECIES	57	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #36	ENSGT00940000155499 #37
American black bear	MODERN SPECIES	664																ENSUAMG00000023233 #22	FLT1 (ENSUAMG00000023232) #23
Polar bear	MODERN SPECIES	177	CDK8 (ENSUMAG00000016849)	WASF3 (ENSUMAG00000016859)	GPR12 (ENSUMAG00000016877) #9	USP12 (ENSUMAG00000016883) #10	ENSUMAG00000016901	ENSUMAG00000016903	ENSUMAG00000016908 ##11	RASL11A (ENSUMAG00000016927) #12	GTF3A (ENSUMAG00000016941) #13	MTIF3 (ENSUMAG00000016954) #14	LNX2 (ENSUMAG00000016959) #15	POLR1D (ENSUMAG00000016968) #16	ENSUMAG00000016971	ENSUMAG00000016976 #19	FLT3 (ENSUMAG00000016979) #21	PAN3 (ENSUMAG00000016986) #22	ENSUMAG00000017000	ENSUMAG00000017006 #23	POMP (ENSUMAG00000017026) #24	SLC46A3 (ENSUMAG00000017030) #25	ENSUMAG00000017046 #26	SLC7A1 (ENSUMAG00000017056) #27	UBL3 (ENSUMAG00000017145) #28	KATNAL1 (ENSUMAG00000017153) #29	ENSUMAG00000017165 #30	USPL1 (ENSUMAG00000017198) #31	ENSUMAG00000017201 #32	MEDAG (ENSUMAG00000017210) #33	TEX26 (ENSUMAG00000017213) #34	HSPH1 (ENSUMAG00000017368) #36	B3GLCT (ENSUMAG00000017840) #37
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Afrotheria	ANCESTRAL SPECIES	89	ENSGT00940000165049	ENSGT00940000158530	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000161261 #19	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34
Tenrec	MODERN SPECIES	597																ENSETEG00000019591 #22
Afrotheria_a	ANCESTRAL SPECIES	90	ENSGT00940000165049	ENSGT00940000158530	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000161261 #19	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34
Hyrax	MODERN SPECIES	3887																PAN3 (ENSPCAG00000001143) #22
Elephant	MODERN SPECIES	294	RNF6 (ENSLAFG00000029161)	CDK8 (ENSLAFG00000006771)	WASF3 (ENSLAFG00000018395)	GPR12 (ENSLAFG00000014464) #9	ENSLAFG00000028761	USP12 (ENSLAFG00000007202) #10	ENSLAFG00000003677 ##11	RASL11A (ENSLAFG00000003673) #12	GTF3A (ENSLAFG00000027315) #13	MTIF3 (ENSLAFG00000015496) #14	LNX2 (ENSLAFG00000015044) #15	POLR1D (ENSLAFG00000032290) #16	ENSLAFG00000022071	CDX2 (ENSLAFG00000030146) #19	FLT3 (ENSLAFG00000015599) #21	PAN3 (ENSLAFG00000015614) #22	FLT1 (ENSLAFG00000015622) #23	POMP (ENSLAFG00000003665) #24	SLC46A3 (ENSLAFG00000009925) #25	ENSLAFG00000016168 #26	SLC7A1 (ENSLAFG00000016186) #27	UBL3 (ENSLAFG00000000781) #28	KATNAL1 (ENSLAFG00000003140) #29	HMGB1 (ENSLAFG00000000269) #30	USPL1 (ENSLAFG00000007634) #31	ALOX5AP (ENSLAFG00000018481) #32	MEDAG (ENSLAFG00000018412) #33	TEX26 (ENSLAFG00000025765) #34	UBAC2 (ENSLAFG00000007662)	GPR18 (ENSLAFG00000007667)	GPR183 (ENSLAFG00000022160)
Xenarthra	ANCESTRAL SPECIES	208			ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00970000194118
Sloth	MODERN SPECIES	4232																PAN3 (ENSCHOG00000011265) #22
Armadillo	MODERN SPECIES	1567	WASF3 (ENSDNOG00000002618)	GPR12 (ENSDNOG00000017683) #9	ENSDNOG00000043479 #10	RASL11A (ENSDNOG00000010166) #12	ENSDNOG00000041047	ENSDNOG00000037405 #13	MTIF3 (ENSDNOG00000037641) #14	LNX2 (ENSDNOG00000006927) #15	ENSDNOG00000043676 #16	ENSDNOG00000044869	GSX1 (ENSDNOG00000011821) #17	PDX1 (ENSDNOG00000003213) #18	CDX2 (ENSDNOG00000035260) #19	ENSDNOG00000046210	FLT3 (ENSDNOG00000001582) #21	PAN3 (ENSDNOG00000017391) #22	ENSDNOG00000031252	ENSDNOG00000036523	SLC46A3 (ENSDNOG00000000330) #25	ENSDNOG00000031980
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.f ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Opossum	MODERN SPECIES	3	CDK8 (ENSMODG00000008753)	WASF3 (ENSMODG00000008795)	ENSMODG00000008874 #10	RPL21 (ENSMODG00000008923) ##11	RASL11A (ENSMODG00000008941) #12	GTF3A (ENSMODG00000008955) #13	ENSMODG00000008962 #14	ENSMODG00000050662	LNX2 (ENSMODG00000008989) #15	ENSMODG00000047217	GSX1 (ENSMODG00000009010) #17	ENSMODG00000009015	CDX2 (ENSMODG00000009021) #19	URAD (ENSMODG00000039216)	FLT3 (ENSMODG00000009045) #21	PAN3 (ENSMODG00000009065) #22	FLT1 (ENSMODG00000009128) #23	POMP (ENSMODG00000009139) #24	SLC46A3 (ENSMODG00000009152) #25	MTUS2 (ENSMODG00000009167) #26	SLC7A1 (ENSMODG00000009198) #27	ENSMODG00000009203	UBL3 (ENSMODG00000037463) #28	KATNAL1 (ENSMODG00000009220) #29	ENSMODG00000048360	ENSMODG00000009238 ##30	ENSMODG00000009262 #31	ALOX5AP (ENSMODG00000009265) #32	MEDAG (ENSMODG00000009294) #33	ENSMODG00000041498	ENSMODG00000009305 #35
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.u #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.f ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Tasmanian devil	MODERN SPECIES	2	CDK8 (ENSSHAG00000012149)	WASF3 (ENSSHAG00000013579)	GPR12 (ENSSHAG00000030631) #9	USP12 (ENSSHAG00000016123) #10	RPL21 (ENSSHAG00000000845) ##11	RASL11A (ENSSHAG00000016468) #12	GTF3A (ENSSHAG00000016965) #13	ENSSHAG00000017006 #14	LNX2 (ENSSHAG00000017242) #15	ENSSHAG00000025491	GSX1 (ENSSHAG00000029989) #17	ENSSHAG00000017812	CDX2 (ENSSHAG00000017862) #19	ENSSHAG00000024737	FLT3 (ENSSHAG00000017900) #21	PAN3 (ENSSHAG00000018065) #22	ENSSHAG00000029371	ENSSHAG00000018212 #23	POMP (ENSSHAG00000030814) #24	SLC46A3 (ENSSHAG00000018516) #25	MTUS2 (ENSSHAG00000003528) #26	SLC7A1 (ENSSHAG00000005902) #27	UBL3 (ENSSHAG00000026625) #28	KATNAL1 (ENSSHAG00000025350) #29	ENSSHAG00000014034 ##30	ENSSHAG00000014789 #31	ALOX5AP (ENSSHAG00000015184) #32	MEDAG (ENSSHAG00000027393) #33	ENSSHAG00000016069 #34	HSPH1 (ENSSHAG00000016697) #36	ENSSHAG00000028294
Diprotodontia	ANCESTRAL SPECIES	11	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.u #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.f ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.u #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.f ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967 #35	ENSGT00940000159635 #36
koala	MODERN SPECIES	66	CDK8 (ENSPCIG00000017352)	WASF3 (ENSPCIG00000037264)	GPR12 (ENSPCIG00000023230) #9	USP12 (ENSPCIG00000022249) #10	RPL21 (ENSPCIG00000022238) ##11	RASL11A (ENSPCIG00000031842) #12	GTF3A (ENSPCIG00000022226) #13	MTIF3 (ENSPCIG00000022222) #14	LNX2 (ENSPCIG00000022213) #15	ENSPCIG00000022208	GSX1 (ENSPCIG00000022205) #17	PDX1 (ENSPCIG00000022204) #18	CDX2 (ENSPCIG00000022200) #19	ENSPCIG00000022197	FLT3 (ENSPCIG00000022190) #21	PAN3 (ENSPCIG00000022181) #22	ENSPCIG00000022165	ENSPCIG00000036587 #23	ENSPCIG00000032952	ENSPCIG00000022156 #24	SLC46A3 (ENSPCIG00000022153) #25	MTUS2 (ENSPCIG00000003294) #26	SLC7A1 (ENSPCIG00000003318) #27	UBL3 (ENSPCIG00000003332) #28	KATNAL1 (ENSPCIG00000021438) #29	ENSPCIG00000021432 ##30	USPL1 (ENSPCIG00000019844) #31	ALOX5AP (ENSPCIG00000019847) #32	MEDAG (ENSPCIG00000012205) #33	ENSPCIG00000012206 #34	ENSPCIG00000026818 #35
Common wonbat	MODERN SPECIES	1049	CDK8 (ENSVURG00010020617)	WASF3 (ENSVURG00010020608)	ENSVURG00010020587 #10	ENSVURG00010020571 ##11	RASL11A (ENSVURG00010020566) #12	ENSVURG00010020554 #13	ENSVURG00010020547 #14	LNX2 (ENSVURG00010020536) #15	ENSVURG00010020531	GSX1 (ENSVURG00010020523) #17	ENSVURG00010020522	PDX1 (ENSVURG00010020518) #18	CDX2 (ENSVURG00010020516) #19	ENSVURG00010020509	FLT3 (ENSVURG00010020490) #21	PAN3 (ENSVURG00010020471) #22	FLT1 (ENSVURG00010020423) #23	POMP (ENSVURG00010020395) #24	SLC46A3 (ENSVURG00010020388) #25	ENSVURG00010020380	ENSVURG00010020337 #26	SLC7A1 (ENSVURG00010020318) #27	UBL3 (ENSVURG00010020310) #28	ENSVURG00010020303	KATNAL1 (ENSVURG00010020293) #29	ENSVURG00010020283 ##30	ENSVURG00010020274 #31	ALOX5AP (ENSVURG00010020266) #32	MEDAG (ENSVURG00010020258) #33	ENSVURG00010020246 #34	ENSVURG00010020232 #35
Wallaby	MODERN SPECIES	1213																ENSMEUG00000011366 #22
Platypus	MODERN SPECIES	12	CDK8 (ENSOANG00000009050)	WASF3 (ENSOANG00000009051)	GPR12 (ENSOANG00000009052) #9	USP12 (ENSOANG00000009053) #10	ENSOANG00000009054 ##11	RASL11A (ENSOANG00000009056) #12	GTF3A (ENSOANG00000038706) #13	ENSOANG00000009057 #14	LNX2 (ENSOANG00000009060) #15	ENSOANG00000051147	GSX1 (ENSOANG00000040381) #17	ENSOANG00000009064	ENSOANG00000043986 #19	ENSOANG00000009066	ENSOANG00000045061 #21	PAN3 (ENSOANG00000009070) #22	FLT1 (ENSOANG00000009071) #23	POMP (ENSOANG00000050524) #24	SLC46A3 (ENSOANG00000015257) #25	ENSOANG00000048575 #26	SLC7A1 (ENSOANG00000041862) #27	UBL3 (ENSOANG00000039422) #28	KATNAL1 (ENSOANG00000014718) #29	ENSOANG00000014719 #30	ENSOANG00000048910	ENSOANG00000014720 #31	ALOX5AP (ENSOANG00000040345) #32	MEDAG (ENSOANG00000039210) #33	TEX26 (ENSOANG00000046294) #34	ENSOANG00000015473 #35	HSPH1 (ENSOANG00000015474) #36