Mammalia	ANCESTRAL SPECIES		ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00940000164592	ENSGT00940000164372	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000163955	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120 #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Theria	ANCESTRAL SPECIES	1	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Eutheria	ANCESTRAL SPECIES	17	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Primates	ANCESTRAL SPECIES	29	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499
Strepsirrhini	ANCESTRAL SPECIES	41	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b ##30	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00940000153259.a.a.b.d	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499	ENSGT00940000158948.b
Lemuriformes_a	ANCESTRAL SPECIES	41																ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499	ENSGT00940000158948.b
Greater bamboo lemur	MODERN SPECIES	560																PAN3 (ENSPSMG00000018171) #22	FLT1 (ENSPSMG00000018075) #23	ENSPSMG00000017984 #24	SLC46A3 (ENSPSMG00000017980) #25	ENSPSMG00000017966 #26	SLC7A1 (ENSPSMG00000017930) #27	UBL3 (ENSPSMG00000017878) #28	KATNAL1 (ENSPSMG00000017845) #29	HMGB1 (ENSPSMG00000017832) #30	USPL1 (ENSPSMG00000017819) #31	ALOX5AP (ENSPSMG00000017803) #32	MEDAG (ENSPSMG00000017788) #33	TEX26 (ENSPSMG00000017783) #34	HSPH1 (ENSPSMG00000017725) #35
Coquerels sifaka	MODERN SPECIES	251																PAN3 (ENSPCOG00000000176) #22	FLT1 (ENSPCOG00000020203) #23	ENSPCOG00000024553 #24	SLC46A3 (ENSPCOG00000023509) #25	MTUS2 (ENSPCOG00000022249) #26	SLC7A1 (ENSPCOG00000025154) #27	UBL3 (ENSPCOG00000027179) #28	KATNAL1 (ENSPCOG00000022614) #29	ENSPCOG00000013493 ##30	USPL1 (ENSPCOG00000021502) #31	ALOX5AP (ENSPCOG00000016712) #32	MEDAG (ENSPCOG00000020360) #33	TEX26 (ENSPCOG00000022109) #34	ENSPCOG00000027960 #35	B3GLCT (ENSPCOG00000004609)	RXFP2 (ENSPCOG00000011955)
Mouse lemur	MODERN SPECIES	4	SACS (ENSMICG00000034895)	SGCG (ENSMICG00000038162)	ENSMICG00000028275	ENSMICG00000006269	RASL11A (ENSMICG00000029724)	GTF3A (ENSMICG00000014763)	MTIF3 (ENSMICG00000014777)	LNX2 (ENSMICG00000016873)	ENSMICG00000016883	GSX1 (ENSMICG00000044124)	PDX1 (ENSMICG00000043487)	CDX2 (ENSMICG00000031345)	ENSMICG00000032881	FLT3 (ENSMICG00000016201)	ENSMICG00000027752	PAN3 (ENSMICG00000016237) #22	FLT1 (ENSMICG00000016251) #23	POMP (ENSMICG00000032068) #24	SLC46A3 (ENSMICG00000016295) #25	ENSMICG00000016299 #26	ENSMICG00000032922 #26	SLC7A1 (ENSMICG00000016312) #27	UBL3 (ENSMICG00000033508) #28	KATNAL1 (ENSMICG00000004250) #29	ENSMICG00000007144 ##30	USPL1 (ENSMICG00000045622) #31	ALOX5AP (ENSMICG00000001953) #32	MEDAG (ENSMICG00000011156) #33	TEX26 (ENSMICG00000008723) #34	HSPH1 (ENSMICG00000011892) #35	B3GLCT (ENSMICG00000011910)
Bushbaby	MODERN SPECIES	235	GPR12 (ENSOGAG00000006144)	USP12 (ENSOGAG00000030639)	ENSOGAG00000030191	ENSOGAG00000008181	RASL11A (ENSOGAG00000008177)	GTF3A (ENSOGAG00000014589)	MTIF3 (ENSOGAG00000014597)	LNX2 (ENSOGAG00000014599)	POLR1D (ENSOGAG00000014601)	GSX1 (ENSOGAG00000011242)	PDX1 (ENSOGAG00000016688)	CDX2 (ENSOGAG00000026117)	ENSOGAG00000016692	FLT3 (ENSOGAG00000016694)	ENSOGAG00000031357	PAN3 (ENSOGAG00000014604) #22	FLT1 (ENSOGAG00000014611) #23	POMP (ENSOGAG00000006044) #24	SLC46A3 (ENSOGAG00000006042) #25	MTUS2 (ENSOGAG00000010807) #26	SLC7A1 (ENSOGAG00000010813) #27	UBL3 (ENSOGAG00000004035) #28	KATNAL1 (ENSOGAG00000011308) #29	ENSOGAG00000003205 ##30	ENSOGAG00000030054	ENSOGAG00000026314	USPL1 (ENSOGAG00000015490) #31	ALOX5AP (ENSOGAG00000015495) #32	MEDAG (ENSOGAG00000034882) #33	TEX26 (ENSOGAG00000006834) #34	HSPH1 (ENSOGAG00000009898) #35
Haplorrhini	ANCESTRAL SPECIES	43	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499
Catarrhini	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00940000154686.g.b
Hominidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h	ENSGT00940000153654.ub
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h	ENSGT00940000153654.ub
Pan	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00390000015470.z.b	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00930000151026.f	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h
Chimpanzee	MODERN SPECIES	4	GPR12 (ENSPTRG00000046989)	USP12 (ENSPTRG00000005727)	RPL21 (ENSPTRG00000005728)	RASL11A (ENSPTRG00000005729)	GTF3A (ENSPTRG00000005730)	MTIF3 (ENSPTRG00000005732)	LNX2 (ENSPTRG00000005733)	POLR1D (ENSPTRG00000005734)	GSX1 (ENSPTRG00000005735)	PDX1 (ENSPTRG00000005736)	ENSPTRG00000005737	CDX2 (ENSPTRG00000043330)	URAD (ENSPTRG00000005739)	FLT3 (ENSPTRG00000005740)	ENSPTRG00000046829	PAN3 (ENSPTRG00000005742) #22	FLT1 (ENSPTRG00000005743) #23	ENSPTRG00000045890	ENSPTRG00000046663	POMP (ENSPTRG00000005745) #24	SLC46A3 (ENSPTRG00000005746) #25	ENSPTRG00000045489	MTUS2 (ENSPTRG00000005747) #26	ENSPTRG00000046056	SLC7A1 (ENSPTRG00000005750) #27	ENSPTRG00000049804	UBL3 (ENSPTRG00000005751) #28	KATNAL1 (ENSPTRG00000005753) #29	ENSPTRG00000044243	UBE2L5 (ENSPTRG00000050842)	ENSPTRG00000048008 #30
Bonobo	MODERN SPECIES	4	CDK8 (ENSPPAG00000035126)	WASF3 (ENSPPAG00000035699)	GPR12 (ENSPPAG00000007707)	ENSPPAG00000007246	ENSPPAG00000042860	RASL11A (ENSPPAG00000027996)	GTF3A (ENSPPAG00000034725)	MTIF3 (ENSPPAG00000027304)	LNX2 (ENSPPAG00000027444)	ENSPPAG00000028138	GSX1 (ENSPPAG00000032556)	ENSPPAG00000032720	ENSPPAG00000032440	CDX2 (ENSPPAG00000032963)	FLT3 (ENSPPAG00000015701)	PAN3 (ENSPPAG00000027826) #22	ENSPPAG00000030264	ENSPPAG00000033250 #23	ENSPPAG00000027416	POMP (ENSPPAG00000036286) #24	SLC46A3 (ENSPPAG00000035795) #25	ENSPPAG00000027903	MTUS2 (ENSPPAG00000032687) #26	ENSPPAG00000034238	SLC7A1 (ENSPPAG00000037016) #27	ENSPPAG00000015303	UBL3 (ENSPPAG00000027496) #28	KATNAL1 (ENSPPAG00000033530) #29	ENSPPAG00000037440	UBE2L5 (ENSPPAG00000032233)	ENSPPAG00000030148 ##30
Human	MODERN SPECIES	4	CDK8 (ENSG00000132964)	WASF3 (ENSG00000132970)	GPR12 (ENSG00000132975)	USP12 (ENSG00000152484)	RPL21 (ENSG00000122026)	RASL11A (ENSG00000122035)	GTF3A (ENSG00000122034)	MTIF3 (ENSG00000122033)	LNX2 (ENSG00000139517)	POLR1D (ENSG00000186184)	GSX1 (ENSG00000169840)	PDX1 (ENSG00000139515)	CDX2 (ENSG00000165556)	URAD (ENSG00000183463)	FLT3 (ENSG00000122025)	PAN3 (ENSG00000152520) #22	FLT1 (ENSG00000102755) #23	POMP (ENSG00000132963) #24	SLC46A3 (ENSG00000139508) #25	MTUS2 (ENSG00000132938) #26	SLC7A1 (ENSG00000139514) #27	UBL3 (ENSG00000122042) #28	KATNAL1 (ENSG00000102781) #29	UBE2L5 (ENSG00000236444)	HMGB1 (ENSG00000189403) #30	USPL1 (ENSG00000132952) #31	ALOX5AP (ENSG00000132965) #32	MEDAG (ENSG00000102802) #33	TEX26 (ENSG00000175664) #34	HSPH1 (ENSG00000120694) #35	B3GLCT (ENSG00000187676)
Gorilla	MODERN SPECIES	4	CDK8 (ENSGGOG00000006569)	WASF3 (ENSGGOG00000012518)	GPR12 (ENSGGOG00000000849)	ENSGGOG00000011358	ENSGGOG00000003002	RASL11A (ENSGGOG00000008785)	GTF3A (ENSGGOG00000008407)	MTIF3 (ENSGGOG00000041079)	LNX2 (ENSGGOG00000016167)	POLR1D (ENSGGOG00000004235)	GSX1 (ENSGGOG00000005011)	PDX1 (ENSGGOG00000002569)	CDX2 (ENSGGOG00000005487)	URAD (ENSGGOG00000005489)	FLT3 (ENSGGOG00000000882)	PAN3 (ENSGGOG00000016079) #22	FLT1 (ENSGGOG00000008750) #23	ENSGGOG00000036812	ENSGGOG00000036780	POMP (ENSGGOG00000015316) #24	SLC46A3 (ENSGGOG00000014254) #25	ENSGGOG00000042729	UBL3 (ENSGGOG00000023146) #28	KATNAL1 (ENSGGOG00000026875) #29	ENSGGOG00000024714	UBE2L5 (ENSGGOG00000006857)	HMGB1 (ENSGGOG00000026764) #30	USPL1 (ENSGGOG00000004673) #31	ENSGGOG00000013859 #32	MEDAG (ENSGGOG00000009867) #33	TEX26 (ENSGGOG00000016812) #34
Orangutan	MODERN SPECIES	4	GPR12 (ENSPPYG00000005231)	USP12 (ENSPPYG00000005232)	RPL21 (ENSPPYG00000005233)	RASL11A (ENSPPYG00000005234)	GTF3A (ENSPPYG00000005235)	MTIF3 (ENSPPYG00000005236)	LNX2 (ENSPPYG00000005237)	ENSPPYG00000005238	GSX1 (ENSPPYG00000005239)	PDX1 (ENSPPYG00000005240)	ENSPPYG00000005241	CDX2 (ENSPPYG00000005242)	URAD (ENSPPYG00000005243)	FLT3 (ENSPPYG00000005244)	ENSPPYG00000040072	PAN3 (ENSPPYG00000005245) #22	FLT1 (ENSPPYG00000005246) #23	ENSPPYG00000034417	ENSPPYG00000038952	POMP (ENSPPYG00000005247) #24	SLC46A3 (ENSPPYG00000005248) #25	MTUS2 (ENSPPYG00000005249) #26	SLC7A1 (ENSPPYG00000005250) #27	ENSPPYG00000034870	UBL3 (ENSPPYG00000037129) #28	KATNAL1 (ENSPPYG00000005253) #29	ENSPPYG00000031030	UBE2L5 (ENSPPYG00000005254)	ENSPPYG00000030447 ##30	USPL1 (ENSPPYG00000005543) #31	ENSPPYG00000005255 #32
Gibbon	MODERN SPECIES	24	ATP2B4 (ENSNLEG00000018117)	ENSNLEG00000000323	ENSNLEG00000000327	RASL11A (ENSNLEG00000000329)	GTF3A (ENSNLEG00000000331)	MTIF3 (ENSNLEG00000000343)	LNX2 (ENSNLEG00000000345)	ENSNLEG00000000358	GSX1 (ENSNLEG00000000360)	PDX1 (ENSNLEG00000000362)	CDX2 (ENSNLEG00000000365)	URAD (ENSNLEG00000000369)	FLT3 (ENSNLEG00000000372)	ENSNLEG00000035718	ENSNLEG00000029210	PAN3 (ENSNLEG00000000388) #22	FLT1 (ENSNLEG00000000456) #23	ENSNLEG00000030098	ENSNLEG00000033802	ENSNLEG00000000571	POMP (ENSNLEG00000000572) #24	SLC46A3 (ENSNLEG00000000599) #25	ENSNLEG00000000618 #26	ENSNLEG00000033304	ENSNLEG00000035615 #26	SLC7A1 (ENSNLEG00000000622) #27	UBL3 (ENSNLEG00000000660) #28	KATNAL1 (ENSNLEG00000000679) #29	ENSNLEG00000000717	UBE2L5 (ENSNLEG00000018657)	ENSNLEG00000000720 ##30
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000155828.o.a	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00910000147903	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000155828.o.a	ENSGT00940000156630 #29	ENSGT00940000154686.g.b	ENSGT00390000002316 #31
Macaca	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00910000147903	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34
Pig-tailed macaque	MODERN SPECIES	165	GPR12 (ENSMNEG00000010974)	ENSMNEG00000039505	ENSMNEG00000034115	RASL11A (ENSMNEG00000033345)	GTF3A (ENSMNEG00000043473)	MTIF3 (ENSMNEG00000032443)	LNX2 (ENSMNEG00000040860)	ENSMNEG00000034652	ENSMNEG00000008630	GSX1 (ENSMNEG00000032682)	PDX1 (ENSMNEG00000032095)	CDX2 (ENSMNEG00000043440)	URAD (ENSMNEG00000045421)	FLT3 (ENSMNEG00000032442)	ENSMNEG00000043801	PAN3 (ENSMNEG00000032817) #22	FLT1 (ENSMNEG00000032149) #23	ENSMNEG00000028177	ENSMNEG00000043904	POMP (ENSMNEG00000031404) #24	SLC46A3 (ENSMNEG00000038996) #25	MTUS2 (ENSMNEG00000039238) #26	SLC7A1 (ENSMNEG00000044453) #27	SLC5A7 (ENSMNEG00000039266)	ENSMNEG00000022050	ST6GAL2 (ENSMNEG00000036708)	ENSMNEG00000019179	ENSMNEG00000044732	UXS1 (ENSMNEG00000040004)	ECRG4 (ENSMNEG00000043594)	NCK2 (ENSMNEG00000039028)
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.i.a	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.a.b.a	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT01100000263493.a.b.a.a.b.a.b.b	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35
Rhesus	MODERN SPECIES	8	ENSMMUG00000050226	USP12 (ENSMMUG00000021425)	ENSMMUG00000054994	ENSMMUG00000058755	RASL11A (ENSMMUG00000049650)	GTF3A (ENSMMUG00000009029)	MTIF3 (ENSMMUG00000009030)	ENSMMUG00000059867	LNX2 (ENSMMUG00000058786)	POLR1D (ENSMMUG00000020386)	GSX1 (ENSMMUG00000004507)	PDX1 (ENSMMUG00000064615)	CDX2 (ENSMMUG00000052070)	URAD (ENSMMUG00000016138)	FLT3 (ENSMMUG00000016139)	PAN3 (ENSMMUG00000022522) #22	FLT1 (ENSMMUG00000021538) #23	ENSMMUG00000063649	POMP (ENSMMUG00000058998) #24	SLC46A3 (ENSMMUG00000013721) #25	MTUS2 (ENSMMUG00000008658) #26	SLC7A1 (ENSMMUG00000008661) #27	UBL3 (ENSMMUG00000003771) #28	KATNAL1 (ENSMMUG00000004922) #29	UBE2L5 (ENSMMUG00000008940)	ENSMMUG00000058466	HMGB1 (ENSMMUG00000046615) #30	ENSMMUG00000052770	USPL1 (ENSMMUG00000007597) #31	ALOX5AP (ENSMMUG00000005572) #32	ENSMMUG00000053993
Crab-eating macaque	MODERN SPECIES	8	ENSMFAG00000062305	ENSMFAG00000053340	RASL11A (ENSMFAG00000044628)	GTF3A (ENSMFAG00000044837)	MTIF3 (ENSMFAG00000045045)	ENSMFAG00000050995	LNX2 (ENSMFAG00000045245)	ENSMFAG00000045264	GSX1 (ENSMFAG00000037158)	PDX1 (ENSMFAG00000063371)	CDX2 (ENSMFAG00000051158)	URAD (ENSMFAG00000043442)	FLT3 (ENSMFAG00000044854)	ENSMFAG00000052223	ENSMFAG00000063510	PAN3 (ENSMFAG00000025538) #22	FLT1 (ENSMFAG00000035718) #23	ENSMFAG00000039222	POMP (ENSMFAG00000025369) #24	SLC46A3 (ENSMFAG00000030072) #25	MTUS2 (ENSMFAG00000032200) #26	SLC7A1 (ENSMFAG00000043457) #27	UBL3 (ENSMFAG00000044955) #28	KATNAL1 (ENSMFAG00000053013) #29	ENSMFAG00000053527	UBE2L5 (ENSMFAG00000045697)	ENSMFAG00000030905 ##30	USPL1 (ENSMFAG00000032370) #31	ALOX5AP (ENSMFAG00000032586) #32	MEDAG (ENSMFAG00000035649) #33	TEX26 (ENSMFAG00000035671) #34
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00910000147903	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000155828.o.a	ENSGT00940000156630 #29	ENSGT00940000154686.g.b	ENSGT00390000002316 #31
Olive baboon	MODERN SPECIES	6	GPR12 (ENSPANG00000003061)	USP12 (ENSPANG00000011533)	ENSPANG00000011984	RASL11A (ENSPANG00000044196)	GTF3A (ENSPANG00000012593)	MTIF3 (ENSPANG00000005047)	LNX2 (ENSPANG00000012983)	ENSPANG00000020259	ENSPANG00000038544	GSX1 (ENSPANG00000017129)	ENSPANG00000047094	PDX1 (ENSPANG00000012683)	CDX2 (ENSPANG00000050183)	URAD (ENSPANG00000014018)	FLT3 (ENSPANG00000009315)	PAN3 (ENSPANG00000001988) #22	FLT1 (ENSPANG00000009892) #23	ENSPANG00000044787	POMP (ENSPANG00000046275) #24	SLC46A3 (ENSPANG00000020218) #25	MTUS2 (ENSPANG00000013682) #26	SLC7A1 (ENSPANG00000012138) #27	UBL3 (ENSPANG00000008471) #28	KATNAL1 (ENSPANG00000023364) #29	UBE2L5 (ENSPANG00000043221)	HMGB1 (ENSPANG00000007200) ##30	USPL1 (ENSPANG00000005488) #31	ALOX5AP (ENSPANG00000020217) #32	MEDAG (ENSPANG00000021857) #33	TEX26 (ENSPANG00000012755) #34	HSPH1 (ENSPANG00000012232) #35
Cercopithecinae_d	ANCESTRAL SPECIES	93	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00910000147903	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00910000147174	ENSGT00940000155349 #27	ENSGT00910000148031
Sooty mangabey	MODERN SPECIES	255	ENSCATG00000018180	ENSCATG00000038452	ENSCATG00000032591	RASL11A (ENSCATG00000033838)	GTF3A (ENSCATG00000032361)	MTIF3 (ENSCATG00000007775)	LNX2 (ENSCATG00000035354)	ENSCATG00000030710	ENSCATG00000002488	GSX1 (ENSCATG00000028004)	PDX1 (ENSCATG00000035793)	CDX2 (ENSCATG00000007363)	URAD (ENSCATG00000007826)	FLT3 (ENSCATG00000014529)	ENSCATG00000032726	PAN3 (ENSCATG00000030893) #22	FLT1 (ENSCATG00000034541) #23	ENSCATG00000024438	ENSCATG00000028829	ENSCATG00000033485	POMP (ENSCATG00000037462) #24	SLC46A3 (ENSCATG00000021488) #25	MTUS2 (ENSCATG00000041831) #26	ENSCATG00000037549	SLC7A1 (ENSCATG00000025899) #27	ENSCATG00000034802
Drill	MODERN SPECIES	1324	RNF6 (ENSMLEG00000038569)	CDK8 (ENSMLEG00000040071)	WASF3 (ENSMLEG00000040168)	GPR12 (ENSMLEG00000002545)	ENSMLEG00000033598	ENSMLEG00000024280	RASL11A (ENSMLEG00000036089)	GTF3A (ENSMLEG00000039703)	MTIF3 (ENSMLEG00000039110)	LNX2 (ENSMLEG00000039062)	ENSMLEG00000041048	ENSMLEG00000041805	PDX1 (ENSMLEG00000032316)	CDX2 (ENSMLEG00000037430)	FLT3 (ENSMLEG00000037398)	PAN3 (ENSMLEG00000008619) #22	ENSMLEG00000003098	FLT1 (ENSMLEG00000034284) #23	ENSMLEG00000038076	ENSMLEG00000036390	ENSMLEG00000042438	POMP (ENSMLEG00000039576) #24	SLC46A3 (ENSMLEG00000044293) #25	ENSMLEG00000006158 ##26
Vervet Monkey	MODERN SPECIES	22	RNF6 (ENSCSAG00000017991)	CDK8 (ENSCSAG00000017989)	WASF3 (ENSCSAG00000017987)	GPR12 (ENSCSAG00000018592)	ENSCSAG00000017986	RASL11A (ENSCSAG00000017985)	GTF3A (ENSCSAG00000017983)	MTIF3 (ENSCSAG00000017982)	LNX2 (ENSCSAG00000017981)	ENSCSAG00000017980	GSX1 (ENSCSAG00000017979)	PDX1 (ENSCSAG00000017977)	CDX2 (ENSCSAG00000017976)	URAD (ENSCSAG00000017975)	FLT3 (ENSCSAG00000017973)	PAN3 (ENSCSAG00000017971) #22	FLT1 (ENSCSAG00000017969) #23	POMP (ENSCSAG00000017967) #24	SLC46A3 (ENSCSAG00000017966) #25	MTUS2 (ENSCSAG00000017964) #26	SLC7A1 (ENSCSAG00000017961) #27	UBL3 (ENSCSAG00000017959) #28	KATNAL1 (ENSCSAG00000017958) #29	USPL1 (ENSCSAG00000017953) #31	ALOX5AP (ENSCSAG00000017950) #32	MEDAG (ENSCSAG00000017948) #33	TEX26 (ENSCSAG00000017946) #34	HSPH1 (ENSCSAG00000017943) #35	B3GLCT (ENSCSAG00000017941)	RXFP2 (ENSCSAG00000017936)	FRY (ENSCSAG00000017926)
Rhinopithecus	ANCESTRAL SPECIES	56	ENSGT00940000165378.d	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a.m	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160.x	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.A.b ##26	ENSGT00910000147174	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00910000148031	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00940000153654	ENSGT00390000002575
Black snub-nosed monkey	MODERN SPECIES	1391	CDK8 (ENSRBIG00000040781)	WASF3 (ENSRBIG00000033396)	GPR12 (ENSRBIG00000001744)	ENSRBIG00000041212	ENSRBIG00000036802	RASL11A (ENSRBIG00000043749)	GTF3A (ENSRBIG00000044964)	MTIF3 (ENSRBIG00000027271)	LNX2 (ENSRBIG00000028850)	ENSRBIG00000036378	GSX1 (ENSRBIG00000032182)	PDX1 (ENSRBIG00000039353)	CDX2 (ENSRBIG00000038667)	ENSRBIG00000030643	FLT3 (ENSRBIG00000042399)	PAN3 (ENSRBIG00000036981) #22	FLT1 (ENSRBIG00000036952) #23	ENSRBIG00000034378	ENSRBIG00000017410	ENSRBIG00000040184	ENSRBIG00000028141 #24	SLC46A3 (ENSRBIG00000039296) #25	ENSRBIG00000043698	MTUS2 (ENSRBIG00000042717) #26	SLC7A1 (ENSRBIG00000030519) #27	ENSRBIG00000024318	UBL3 (ENSRBIG00000032584) #28
Golden snub-nosed monkey	MODERN SPECIES	603										GSX1 (ENSRROG00000032356)	PDX1 (ENSRROG00000038796)	CDX2 (ENSRROG00000036416)	URAD (ENSRROG00000032393)	FLT3 (ENSRROG00000032511)	ENSRROG00000038089	PAN3 (ENSRROG00000044835) #22	FLT1 (ENSRROG00000044082) #23	ENSRROG00000044673	ENSRROG00000036924	ENSRROG00000028953	ENSRROG00000035051 #24	SLC46A3 (ENSRROG00000013197) #25	ENSRROG00000029261 ##26
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.b.b ##30	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.b.b ##30	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35
Marmoset	MODERN SPECIES	17	ENSCJAG00000073678	ENSCJAG00000069611	ENSCJAG00000044684	RASL11A (ENSCJAG00000019369)	GTF3A (ENSCJAG00000077697)	MTIF3 (ENSCJAG00000019378)	LNX2 (ENSCJAG00000019379)	POLR1D (ENSCJAG00000044669)	GSX1 (ENSCJAG00000080181)	PDX1 (ENSCJAG00000078316)	ENSCJAG00000076582	CDX2 (ENSCJAG00000019398)	ENSCJAG00000019404	FLT3 (ENSCJAG00000019405)	ENSCJAG00000073991	PAN3 (ENSCJAG00000019421) #22	FLT1 (ENSCJAG00000019447) #23	ENSCJAG00000080582	POMP (ENSCJAG00000019473) #24	SLC46A3 (ENSCJAG00000019491) #25	MTUS2 (ENSCJAG00000019500) #26	ENSCJAG00000072801	SLC7A1 (ENSCJAG00000019515) #27	ENSCJAG00000058143	UBL3 (ENSCJAG00000019517) #28	KATNAL1 (ENSCJAG00000021612) #29	ENSCJAG00000079039	ENSCJAG00000020439 ##30	USPL1 (ENSCJAG00000021616) #31	ALOX5AP (ENSCJAG00000021617) #32	MEDAG (ENSCJAG00000018674) #33
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00390000011417.k.d	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35
Capuchin	MODERN SPECIES	103	ENSCCAG00000021328	USP12 (ENSCCAG00000023369)	ENSCCAG00000031101	RASL11A (ENSCCAG00000021842)	GTF3A (ENSCCAG00000029730)	MTIF3 (ENSCCAG00000036048)	ENSCCAG00000026568	LNX2 (ENSCCAG00000020368)	ENSCCAG00000021349	GSX1 (ENSCCAG00000025929)	PDX1 (ENSCCAG00000036295)	CDX2 (ENSCCAG00000025801)	ENSCCAG00000029430	FLT3 (ENSCCAG00000022587)	ENSCCAG00000027785	PAN3 (ENSCCAG00000021218) #22	ENSCCAG00000000468	FLT1 (ENSCCAG00000035784) #23	POMP (ENSCCAG00000027871) #24	SLC46A3 (ENSCCAG00000025858) #25	MTUS2 (ENSCCAG00000025313) #26	SLC7A1 (ENSCCAG00000000822) #27	CIAPIN1 (ENSCCAG00000020425)	UBL3 (ENSCCAG00000021780) #28	KATNA1 (ENSCCAG00000029984) #29	ENSCCAG00000028011 ##30	ENSCCAG00000032047	REPS2 (ENSCCAG00000024409)	ENSCCAG00000022504	TXLNG (ENSCCAG00000030583)	SYAP1 (ENSCCAG00000034423)
Bolivian squirrel monkey	MODERN SPECIES	42	ENSSBOG00000031441	RASL11A (ENSSBOG00000025363)	GTF3A (ENSSBOG00000002098)	MTIF3 (ENSSBOG00000030469)	LNX2 (ENSSBOG00000025148)	ENSSBOG00000014497	ENSSBOG00000028482	ENSSBOG00000015416	GSX1 (ENSSBOG00000026103)	PDX1 (ENSSBOG00000031436)	CDX2 (ENSSBOG00000031573)	ENSSBOG00000027743	ENSSBOG00000020835	FLT3 (ENSSBOG00000026666)	ENSSBOG00000032374	PAN3 (ENSSBOG00000020298) #22	ENSSBOG00000020899	FLT1 (ENSSBOG00000015766) #23	POMP (ENSSBOG00000032229) #24	SLC46A3 (ENSSBOG00000025396) #25	ENSSBOG00000019071	MTUS2 (ENSSBOG00000026505) #26	SLC7A1 (ENSSBOG00000020061) #27	ENSSBOG00000028866	UBL3 (ENSSBOG00000009211) #28	ENSSBOG00000020013	KATNAL1 (ENSSBOG00000009792) #29	ENSSBOG00000023208 ##30	ENSSBOG00000024496	USPL1 (ENSSBOG00000028053) #31	ALOX5AP (ENSSBOG00000035529) #32
Mas night monkey	MODERN SPECIES	331	NUP58 (ENSANAG00000023073)	ENSANAG00000032118	ENSANAG00000023031	RASL11A (ENSANAG00000027999)	GTF3A (ENSANAG00000019293)	MTIF3 (ENSANAG00000031630)	ENSANAG00000024188	LNX2 (ENSANAG00000028866)	POLR1D (ENSANAG00000024486)	GSX1 (ENSANAG00000020508)	PDX1 (ENSANAG00000033534)	CDX2 (ENSANAG00000030392)	URAD (ENSANAG00000029018)	FLT3 (ENSANAG00000025242)	ENSANAG00000034890	PAN3 (ENSANAG00000028419) #22	ENSANAG00000028102	FLT1 (ENSANAG00000027521) #23	ENSANAG00000035277 #24
Tarsier	MODERN SPECIES	5212														ENSTSYG00000029265	FLT3 (ENSTSYG00000011237)	PAN3 (ENSTSYG00000011845) #22	ENSTSYG00000034627	CD2AP (ENSTSYG00000002464)	ENSTSYG00000002476	ADGRF4 (ENSTSYG00000002483)	OPN5 (ENSTSYG00000005962)
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Glires	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Rodentia	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647.c	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647.c	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647.c	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Degu	MODERN SPECIES	79	GPR12 (ENSODEG00000006388)	USP12 (ENSODEG00000006744)	ENSODEG00000005022	RASL11A (ENSODEG00000005775)	GTF3A (ENSODEG00000006725)	MTIF3 (ENSODEG00000006818)	LNX2 (ENSODEG00000006222)	ENSODEG00000005294	ENSODEG00000006454	GSX1 (ENSODEG00000005135)	ENSODEG00000019134	PDX1 (ENSODEG00000005235)	CDX2 (ENSODEG00000007340)	ENSODEG00000007620	FLT3 (ENSODEG00000007884)	PAN3 (ENSODEG00000005038) #22	ENSODEG00000006016	ENSODEG00000006274 #23	ENSODEG00000005111 #24	ENSODEG00000005569	SLC46A3 (ENSODEG00000006238) #25	ENSODEG00000006635	ENSODEG00000005871 #26	SLC7A1 (ENSODEG00000005306) #27	ENSODEG00000005438	UBL3 (ENSODEG00000005571) #28	KATNAL1 (ENSODEG00000005926) #29	ENSODEG00000006120 ##30	USPL1 (ENSODEG00000007176) #31	ALOX5AP (ENSODEG00000005645) #32	MEDAG (ENSODEG00000005967) #33
Long-tailed chinchilla	MODERN SPECIES	204	CDK8 (ENSCLAG00000003311)	WASF3 (ENSCLAG00000003372)	GPR12 (ENSCLAG00000003409)	USP12 (ENSCLAG00000003543)	Rpl21 (ENSCLAG00000003656)	RASL11A (ENSCLAG00000003867)	GTF3A (ENSCLAG00000003912)	MTIF3 (ENSCLAG00000004080)	LNX2 (ENSCLAG00000004148)	POLR1D (ENSCLAG00000017623)	ENSCLAG00000004320	GSX1 (ENSCLAG00000004357)	PDX1 (ENSCLAG00000006652)	CDX2 (ENSCLAG00000006810)	FLT3 (ENSCLAG00000007093)	PAN3 (ENSCLAG00000007575) #22	FLT1 (ENSCLAG00000008187) #23	POMP (ENSCLAG00000008609) #24	SLC46A3 (ENSCLAG00000009379) #25
Guinea pig	MODERN SPECIES	6	RNF6 (ENSCPOG00000009120)	CDK8 (ENSCPOG00000040435)	WASF3 (ENSCPOG00000010156)	ENSCPOG00000020112	USP12 (ENSCPOG00000005241)	ENSCPOG00000008784	RASL11A (ENSCPOG00000031264)	GTF3A (ENSCPOG00000010143)	MTIF3 (ENSCPOG00000010148)	LNX2 (ENSCPOG00000010152)	ENSCPOG00000033461	ENSCPOG00000026854	PDX1 (ENSCPOG00000024534)	CDX2 (ENSCPOG00000007276)	FLT3 (ENSCPOG00000007285)	PAN3 (ENSCPOG00000013349) #22	FLT1 (ENSCPOG00000013357) #23	POMP (ENSCPOG00000001710) #24	SLC46A3 (ENSCPOG00000015460) #25	ENSCPOG00000005581 #26	SLC7A1 (ENSCPOG00000005590) #27	UBL3 (ENSCPOG00000036242) #28	KATNAL1 (ENSCPOG00000000804) #29	HMGB1 (ENSCPOG00000031835) #30	USPL1 (ENSCPOG00000009937) #31	ALOX5AP (ENSCPOG00000032690) #32	MEDAG (ENSCPOG00000003921) #33	ENSCPOG00000007441 #35	ENSCPOG00000035490	B3GLCT (ENSCPOG00000007455)	RXFP2 (ENSCPOG00000009157)
Naked mole-rat female	MODERN SPECIES	2	WASF3 (ENSHGLG00000006350)	GPR12 (ENSHGLG00000042343)	ENSHGLG00000006711	ENSHGLG00000005660	RASL11A (ENSHGLG00000005304)	ENSHGLG00000004173	MTIF3 (ENSHGLG00000003959)	LNX2 (ENSHGLG00000003410)	POLR1D (ENSHGLG00000039229)	ENSHGLG00000003202	GSX1 (ENSHGLG00000039858)	PDX1 (ENSHGLG00000010243)	CDX2 (ENSHGLG00000009166)	URAD (ENSHGLG00000008479)	FLT3 (ENSHGLG00000005717)	PAN3 (ENSHGLG00000018782) #22	FLT1 (ENSHGLG00000003643) #23	ENSHGLG00000008991 #24	SLC46A3 (ENSHGLG00000007999) #25	ENSHGLG00000039882 ##24	ENSHGLG00000012383	ENSHGLG00000013589 #26	ENSHGLG00000019220 #27	ENSHGLG00000033244	UBL3 (ENSHGLG00000040587) #28	KATNAL1 (ENSHGLG00000003538) #29	ENSHGLG00000003352 ##30	USPL1 (ENSHGLG00000036213) #31	ALOX5AP (ENSHGLG00000013689) #32	MEDAG (ENSHGLG00000037818) #33	TEX26 (ENSHGLG00000018916) #34
Sciuridae	ANCESTRAL SPECIES	34	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a	ENSGT00940000153284.a.g.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Marmotini	ANCESTRAL SPECIES	29	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a	ENSGT00940000153284.a.g.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00950000183120.e.b.a.a.b.b.b.b ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Squirrel	MODERN SPECIES	72	SLITRK5 (ENSSTOG00000022257)	GPR12 (ENSSTOG00000011362)	ENSSTOG00000023839	USP12 (ENSSTOG00000011364)	ENSSTOG00000033637	RASL11A (ENSSTOG00000023879)	GTF3A (ENSSTOG00000013853)	MTIF3 (ENSSTOG00000013866)	LNX2 (ENSSTOG00000013869)	POLR1D (ENSSTOG00000013877)	GSX1 (ENSSTOG00000029234)	PDX1 (ENSSTOG00000028173)	ENSSTOG00000002918	ENSSTOG00000028014	FLT3 (ENSSTOG00000002925)	PAN3 (ENSSTOG00000009453) #22	FLT1 (ENSSTOG00000021178) #23	POMP (ENSSTOG00000013687) #24	SLC46A3 (ENSSTOG00000013694) #25	ENSSTOG00000022794 #26	SLC7A1 (ENSSTOG00000012771) #27	UBL3 (ENSSTOG00000012777) #28	KATNAL1 (ENSSTOG00000008802) #29	ENSSTOG00000000443 ##30	USPL1 (ENSSTOG00000028023) #31	ALOX5AP (ENSSTOG00000010915) #32	MEDAG (ENSSTOG00000003534) #33	ENSSTOG00000020892	HSPH1 (ENSSTOG00000001700) #35	B3GLCT (ENSSTOG00000001710)	RXFP2 (ENSSTOG00000010636)
Arctic ground squirrel	MODERN SPECIES	58		SLITRK5 (ENSUPAG00010018031)	GPR12 (ENSUPAG00010018043)	USP12 (ENSUPAG00010018049)	ENSUPAG00010018061	RASL11A (ENSUPAG00010018073)	GTF3A (ENSUPAG00010018082)	MTIF3 (ENSUPAG00010018090)	LNX2 (ENSUPAG00010018096)	POLR1D (ENSUPAG00010018107)	GSX1 (ENSUPAG00010018112)	PDX1 (ENSUPAG00010018122)	CDX2 (ENSUPAG00010018125)	ENSUPAG00010018133	FLT3 (ENSUPAG00010018139)	PAN3 (ENSUPAG00010000039) #22	FLT1 (ENSUPAG00010000212) #23	POMP (ENSUPAG00010000279) #24	SLC46A3 (ENSUPAG00010000307) #25	ENSUPAG00010000323	ENSUPAG00010000338 #26	SLC7A1 (ENSUPAG00010000429) #27	UBL3 (ENSUPAG00010000449) #28	KATNAL1 (ENSUPAG00010000483) #29	ENSUPAG00010000514 ##30	USPL1 (ENSUPAG00010000537) #31	ALOX5AP (ENSUPAG00010000582) #32	MEDAG (ENSUPAG00010000596) #33	TEX26 (ENSUPAG00010000608) #34	ENSUPAG00010000650	HSPH1 (ENSUPAG00010000704) #35
Alpin marmot	MODERN SPECIES	13	ENSMMMG00000021355	SLITRK5 (ENSMMMG00000021362)	GPR12 (ENSMMMG00000021388)	ENSMMMG00000021396	ENSMMMG00000021402	RPL21 (ENSMMMG00000021415)	RASL11A (ENSMMMG00000021424)	GTF3A (ENSMMMG00000021436)	MTIF3 (ENSMMMG00000021440)	LNX2 (ENSMMMG00000021459)	POLR1D (ENSMMMG00000021469)	GSX1 (ENSMMMG00000021480)	CDX2 (ENSMMMG00000021482)	ENSMMMG00000021485	FLT3 (ENSMMMG00000021498)	PAN3 (ENSMMMG00000021592) #22	FLT1 (ENSMMMG00000021722) #23	POMP (ENSMMMG00000021745) #24	SLC46A3 (ENSMMMG00000021759) #25	ENSMMMG00000021777 #26	SLC7A1 (ENSMMMG00000021811) #27	UBL3 (ENSMMMG00000021836) #28	KATNAL1 (ENSMMMG00000021861) #29	ENSMMMG00000021875 ##30	ENSMMMG00000021912 #31	ALOX5AP (ENSMMMG00000021924) #32	MEDAG (ENSMMMG00000021928) #33	TEX26 (ENSMMMG00000021931) #34	ENSMMMG00000021936	HSPH1 (ENSMMMG00000021945) #35	B3GLCT (ENSMMMG00000022023)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005000440	ENSSVLG00005000420	GPR12 (ENSSVLG00005000385)	ENSSVLG00005000350	ENSSVLG00005000213	RASL11A (ENSSVLG00005023466)	GTF3A (ENSSVLG00005023413)	MTIF3 (ENSSVLG00005023396)	LNX2 (ENSSVLG00005023366)	POLR1D (ENSSVLG00005023318)	GSX1 (ENSSVLG00005023295)	PDX1 (ENSSVLG00005023276)	CDX2 (ENSSVLG00005023249)	URAD (ENSSVLG00005023233)	FLT3 (ENSSVLG00005023095)	PAN3 (ENSSVLG00005022998) #22	FLT1 (ENSSVLG00005022893) #23	POMP (ENSSVLG00005022839) #24	SLC46A3 (ENSSVLG00005022784) #25	MTUS2 (ENSSVLG00005022484) #26	SLC7A1 (ENSSVLG00005022416) #27	UBL3 (ENSSVLG00005022374) #28	KATNAL1 (ENSSVLG00005022343) #29	ENSSVLG00005022302 #30	USPL1 (ENSSVLG00005022232) #31	ALOX5AP (ENSSVLG00005022177) #32	MEDAG (ENSSVLG00005022152) #33	TEX26 (ENSSVLG00005022083) #34	ENSSVLG00005021904	HSPH1 (ENSSVLG00005021367) #35	B3GLCT (ENSSVLG00005021156)
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Myomorpha	ANCESTRAL SPECIES	46	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Muroidea	ANCESTRAL SPECIES	68	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Muroidea_A	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.d	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Cricetidae	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.d	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.d	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499	ENSGT00940000158948.b
Chinese hamster chok1gshd	MODERN SPECIES	130	Gpr12 (ENSCGRG00001003285)	ENSCGRG00001021742	Rpl21 (ENSCGRG00001007602)	Rasl11a (ENSCGRG00001014752)	Gtf3a (ENSCGRG00001024969)	Mtif3 (ENSCGRG00001024612)	ENSCGRG00001024532	Lnx2 (ENSCGRG00001022751)	Polr1d (ENSCGRG00001021251)	Gsx1 (ENSCGRG00001017641)	Pdx1 (ENSCGRG00001024891)	Cdx2 (ENSCGRG00001024259)	Urad (ENSCGRG00001021146)	Flt3 (ENSCGRG00001010328)	ENSCGRG00001012489	Pan3 (ENSCGRG00001024986) #22	Flt1 (ENSCGRG00001000764) #23	Pomp (ENSCGRG00001000803) #24	Slc46a3 (ENSCGRG00001023870) #25	ENSCGRG00001001206	Mtus2 (ENSCGRG00001023648) #26	Slc7a1 (ENSCGRG00001019393) #27	Ubl3 (ENSCGRG00001002093) #28	Katnal1 (ENSCGRG00001024027) #29	ENSCGRG00001018342 #31	Alox5ap (ENSCGRG00001018470) #32	ENSCGRG00001025063	Medag (ENSCGRG00001024417) #33	Tex26 (ENSCGRG00001015836) #34	Wdr95 (ENSCGRG00001015579)	Hsph1 (ENSCGRG00001021270) #35
Golden Hamster	MODERN SPECIES	762	Rfc3 (ENSMAUG00000016464)	Gpr12 (ENSMAUG00000015064)	ENSMAUG00000010877	Usp12 (ENSMAUG00000010310)	ENSMAUG00000006957	Rasl11a (ENSMAUG00000019356)	Gtf3a (ENSMAUG00000016253)	Mtif3 (ENSMAUG00000011167)	Lnx2 (ENSMAUG00000009457)	Polr1d (ENSMAUG00000001946)	Pdx1 (ENSMAUG00000021082)	Cdx2 (ENSMAUG00000020822)	Urad (ENSMAUG00000019946)	ENSMAUG00000001106	Flt3 (ENSMAUG00000011952)	Pan3 (ENSMAUG00000021155) #22	Flt1 (ENSMAUG00000006859) #23	Pomp (ENSMAUG00000006509) #24	ENSMAUG00000020285	ENSMAUG00000018323 #26	Slc7a1 (ENSMAUG00000000359) #27	Ubl3 (ENSMAUG00000016399) #28	Katnal1 (ENSMAUG00000007731) #29	ENSMAUG00000017646	ENSMAUG00000013736 #31	Alox5ap (ENSMAUG00000012262) #32	Medag (ENSMAUG00000009604) #33	Tex26 (ENSMAUG00000016345) #34	Wdr95 (ENSMAUG00000014604)	Hsph1 (ENSMAUG00000002443) #35	B3glct (ENSMAUG00000018787)
Cricetidae_B	ANCESTRAL SPECIES	49	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.d	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Prairie vole	MODERN SPECIES	7	ENSMOCG00000017944	Gpr12 (ENSMOCG00000009890)	Usp12 (ENSMOCG00000001714)	Rpl21 (ENSMOCG00000003487)	Rasl11a (ENSMOCG00000000626)	ENSMOCG00000017124	Gtf3a (ENSMOCG00000004408)	Mtif3 (ENSMOCG00000017226)	Lnx2 (ENSMOCG00000022088)	Polr1d (ENSMOCG00000021288)	Gsx1 (ENSMOCG00000002374)	Pdx1 (ENSMOCG00000007886)	Cdx2 (ENSMOCG00000010222)	Urad (ENSMOCG00000018154)	Flt3 (ENSMOCG00000015945)	Pan3 (ENSMOCG00000001443) #22	Flt1 (ENSMOCG00000019790) #23	ENSMOCG00000000648	Pomp (ENSMOCG00000006131) #24	Slc46a3 (ENSMOCG00000007090) #25	Mtus2 (ENSMOCG00000013900) #26	Slc7a1 (ENSMOCG00000022298) #27	Ubl3 (ENSMOCG00000012896) #28	Katnal1 (ENSMOCG00000013914) #29	ENSMOCG00000018161 ##30	ENSMOCG00000018612 #31	Alox5ap (ENSMOCG00000018258) #32	Medag (ENSMOCG00000012447) #33	Tex26 (ENSMOCG00000013830) #34	Wdr95 (ENSMOCG00000021942)	Hsph1 (ENSMOCG00000019013) #35
Northern American deer mouse	MODERN SPECIES	15	Wasf3 (ENSPEMG00000011510)	ENSPEMG00000030961	Gpr12 (ENSPEMG00000010665)	Usp12 (ENSPEMG00000008193)	Rpl21 (ENSPEMG00000006041)	Rasl11a (ENSPEMG00000004475)	Gtf3a (ENSPEMG00000003201)	Mtif3 (ENSPEMG00000000930)	Lnx2 (ENSPEMG00000008280)	Polr1d (ENSPEMG00000006336)	Gsx1 (ENSPEMG00000004992)	Pdx1 (ENSPEMG00000001176)	Cdx2 (ENSPEMG00000000632)	Urad (ENSPEMG00000025423)	Flt3 (ENSPEMG00000012278)	Pan3 (ENSPEMG00000008992) #22	Flt1 (ENSPEMG00000019000) #23	ENSPEMG00000014341 #24	Slc46a3 (ENSPEMG00000014019) #25	ENSPEMG00000024696	Mtus2 (ENSPEMG00000011863) #26	Slc7a1 (ENSPEMG00000006808) #27	Ubl3 (ENSPEMG00000010779) #28	Katnal1 (ENSPEMG00000009164) #29	ENSPEMG00000000834 ##30	Uspl1 (ENSPEMG00000003660) #31	Alox5ap (ENSPEMG00000000576) #32	Medag (ENSPEMG00000000331) #33	Tex26 (ENSPEMG00000019024) #34	Wdr95 (ENSPEMG00000016428)	Hsph1 (ENSPEMG00000009941) #35
Murinae	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Mus	ANCESTRAL SPECIES	17	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a.n #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00960000191336	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
spretus	MODERN SPECIES	14	Cdk8 (MGP_SPRETEiJ_G0029023)	Wasf3 (MGP_SPRETEiJ_G0029024)	Gpr12 (MGP_SPRETEiJ_G0029025)	Usp12 (MGP_SPRETEiJ_G0029026)	MGP_SPRETEiJ_G0029027	Rasl11a (MGP_SPRETEiJ_G0029028)	Gtf3a (MGP_SPRETEiJ_G0029029)	Mtif3 (MGP_SPRETEiJ_G0029030)	Lnx2 (MGP_SPRETEiJ_G0029031)	Polr1d (MGP_SPRETEiJ_G0029032)	Gsx1 (MGP_SPRETEiJ_G0029033)	Pdx1 (MGP_SPRETEiJ_G0029034)	Cdx2 (MGP_SPRETEiJ_G0029035)	Urad (MGP_SPRETEiJ_G0029036)	Flt3 (MGP_SPRETEiJ_G0029037)	Pan3 (MGP_SPRETEiJ_G0029038) #22	Flt1 (MGP_SPRETEiJ_G0029039) #23	Pomp (MGP_SPRETEiJ_G0029040) #24	Slc46a3 (MGP_SPRETEiJ_G0029041) #25	Mtus2 (MGP_SPRETEiJ_G0029042) #26	Slc7a1 (MGP_SPRETEiJ_G0029043) #27	Ubl3 (MGP_SPRETEiJ_G0029044) #28	MGP_SPRETEiJ_G0029045 #29	MGP_SPRETEiJ_G0029046 #29	MGP_SPRETEiJ_G0029047 ##30	Uspl1 (MGP_SPRETEiJ_G0029048) #31	Alox5ap (MGP_SPRETEiJ_G0029049) #32	Medag (MGP_SPRETEiJ_G0029050) #33	Tex26 (MGP_SPRETEiJ_G0029051) #34	Wdr95 (MGP_SPRETEiJ_G0029052)	Hsph1 (MGP_SPRETEiJ_G0029053) #35
Steppe mouse	MODERN SPECIES	3364	Gpr12 (ENSMSIG00000024129)	ENSMSIG00000024119	Usp12 (ENSMSIG00000024096)	ENSMSIG00000024049	Rasl11a (ENSMSIG00000024039)	Gtf3a (ENSMSIG00000024026)	Mtif3 (ENSMSIG00000024005)	Lnx2 (ENSMSIG00000023999)	ENSMSIG00000023978	Gsx1 (ENSMSIG00000023969)	Pdx1 (ENSMSIG00000023956)	Cdx2 (ENSMSIG00000023947)	ENSMSIG00000023941	ENSMSIG00000023930	Flt3 (ENSMSIG00000023851)	Pan3 (ENSMSIG00000023687) #22	Flt1 (ENSMSIG00000023642) #23	ENSMSIG00000023628	Pomp (ENSMSIG00000023598) #24	Slc46a3 (ENSMSIG00000023578) #25	Mtus2 (ENSMSIG00000023484) #26	Slc7a1 (ENSMSIG00000023421) #27	Ubl3 (ENSMSIG00000023402) #28	Katnal1 (ENSMSIG00000023377) #29	ENSMSIG00000023332 #30	Uspl1 (ENSMSIG00000023285) #31	Alox5ap (ENSMSIG00000023243) #32	ENSMSIG00000023226	Medag (ENSMSIG00000023188) #33	Tex26 (ENSMSIG00000023128) #34	Wdr95 (ENSMSIG00000023065)
Mouse	MODERN SPECIES	14	Gm3409 (ENSMUSG00000096664)	Gm3415 (ENSMUSG00000095557)	Gpr12 (ENSMUSG00000041468)	Usp12 (ENSMUSG00000029640)	Rpl21 (ENSMUSG00000041453)	Rasl11a (ENSMUSG00000029641)	Gtf3a (ENSMUSG00000016503)	Mtif3 (ENSMUSG00000016510)	Lnx2 (ENSMUSG00000016520)	Polr1d (ENSMUSG00000029642)	Gsx1 (ENSMUSG00000053129)	Pdx1 (ENSMUSG00000029644)	Cdx2 (ENSMUSG00000029646)	Urad (ENSMUSG00000075543)	Flt3 (ENSMUSG00000042817)	Pan3 (ENSMUSG00000029647) #22	Flt1 (ENSMUSG00000029648) #23	Pomp (ENSMUSG00000029649) #24	Slc46a3 (ENSMUSG00000029650) #25	Mtus2 (ENSMUSG00000029651) #26	Slc7a1 (ENSMUSG00000041313) #27	Ubl3 (ENSMUSG00000001687) #28	Katnal1 (ENSMUSG00000041298) #29	Hmgb1 (ENSMUSG00000066551) ##30	Uspl1 (ENSMUSG00000041264) #31	Alox5ap (ENSMUSG00000060063) #32	Medag (ENSMUSG00000029659) #33	Tex26 (ENSMUSG00000029660) #34	Wdr95 (ENSMUSG00000029658)	Hsph1 (ENSMUSG00000029657) #35	B3glct (ENSMUSG00000051950)
Ryukyu mouse	MODERN SPECIES	14	Cdk8 (MGP_CAROLIEiJ_G0028025)	Wasf3 (MGP_CAROLIEiJ_G0028026)	Gpr12 (MGP_CAROLIEiJ_G0028027)	Usp12 (MGP_CAROLIEiJ_G0028028)	Rpl21 (MGP_CAROLIEiJ_G0028029)	Rasl11a (MGP_CAROLIEiJ_G0028030)	Gtf3a (MGP_CAROLIEiJ_G0028031)	Mtif3 (MGP_CAROLIEiJ_G0028032)	Lnx2 (MGP_CAROLIEiJ_G0028033)	Polr1d (MGP_CAROLIEiJ_G0028034)	Gsx1 (MGP_CAROLIEiJ_G0028035)	Pdx1 (MGP_CAROLIEiJ_G0028036)	Cdx2 (MGP_CAROLIEiJ_G0028037)	Urad (MGP_CAROLIEiJ_G0028038)	Flt3 (MGP_CAROLIEiJ_G0028039)	Pan3 (MGP_CAROLIEiJ_G0028040) #22	Flt1 (MGP_CAROLIEiJ_G0028041) #23	Pomp (MGP_CAROLIEiJ_G0028042) #24	Slc46a3 (MGP_CAROLIEiJ_G0028043) #25	Mtus2 (MGP_CAROLIEiJ_G0028044) #26	Slc7a1 (MGP_CAROLIEiJ_G0028045) #27	Ubl3 (MGP_CAROLIEiJ_G0028046) #28	MGP_CAROLIEiJ_G0028047 #29	MGP_CAROLIEiJ_G0028048 #29	MGP_CAROLIEiJ_G0028049 ##30	Uspl1 (MGP_CAROLIEiJ_G0028050) #31	MGP_CAROLIEiJ_G0028051 #32	Medag (MGP_CAROLIEiJ_G0028052) #33	Tex26 (MGP_CAROLIEiJ_G0028053) #34	Wdr95 (MGP_CAROLIEiJ_G0028054)	Hsph1 (MGP_CAROLIEiJ_G0028055) #35
Shrew mouse	MODERN SPECIES	15	Cdk8 (MGP_PahariEiJ_G0024591)	Wasf3 (MGP_PahariEiJ_G0024592)	Gpr12 (MGP_PahariEiJ_G0024593)	Usp12 (MGP_PahariEiJ_G0024594)	MGP_PahariEiJ_G0024595	Rasl11a (MGP_PahariEiJ_G0024596)	Gtf3a (MGP_PahariEiJ_G0024597)	Mtif3 (MGP_PahariEiJ_G0024598)	Lnx2 (MGP_PahariEiJ_G0024599)	Polr1d (MGP_PahariEiJ_G0024600)	Gsx1 (MGP_PahariEiJ_G0024601)	Pdx1 (MGP_PahariEiJ_G0024602)	Cdx2 (MGP_PahariEiJ_G0024603)	Urad (MGP_PahariEiJ_G0024604)	Flt3 (MGP_PahariEiJ_G0024605)	Pan3 (MGP_PahariEiJ_G0024606) #22	Flt1 (MGP_PahariEiJ_G0024607) #23	MGP_PahariEiJ_G0024608	Slc46a3 (MGP_PahariEiJ_G0024609) #25	Mtus2 (MGP_PahariEiJ_G0024610) #26	Slc7a1 (MGP_PahariEiJ_G0024611) #27	Ubl3 (MGP_PahariEiJ_G0024612) #28	MGP_PahariEiJ_G0024613 #29	MGP_PahariEiJ_G0024614 #29	MGP_PahariEiJ_G0024615 ##30	Uspl1 (MGP_PahariEiJ_G0024616) #31	Alox5ap (MGP_PahariEiJ_G0024617) #32	Medag (MGP_PahariEiJ_G0024618) #33	Tex26 (MGP_PahariEiJ_G0024619) #34	MGP_PahariEiJ_G0024620	Hsph1 (MGP_PahariEiJ_G0024621) #35
Rat	MODERN SPECIES	3	LOC120095889 (ENSRNOG00000050264)	Wasf3 (ENSRNOG00000048898)	Gpr12 (ENSRNOG00000039832)	Usp12 (ENSRNOG00000033411)	Rpl21 (ENSRNOG00000000957)	Rasl11a (ENSRNOG00000000956)	Gtf3a (ENSRNOG00000050016)	Mtif3 (ENSRNOG00000070811)	Lnx2 (ENSRNOG00000000955)	Polr1d (ENSRNOG00000000954)	Gsx1 (ENSRNOG00000000952)	Pdx1 (ENSRNOG00000046458)	Cdx2 (ENSRNOG00000032759)	Urad (ENSRNOG00000050360)	Flt3 (ENSRNOG00000054764)	Pan3 (ENSRNOG00000000942) #22	Flt1 (ENSRNOG00000000940) #23	Pomp (ENSRNOG00000049229) ##24	Slc46a3 (ENSRNOG00000000937) #25	Mtus2 (ENSRNOG00000032410) #26	Slc7a1 (ENSRNOG00000000924) #27	Katnal1 (ENSRNOG00000047618) #29	Rpl35a-ps6 (ENSRNOG00000069961)	AABR07035218.1 (ENSRNOG00000029813) ##30	Uspl1 (ENSRNOG00000000909) #31	Alox5ap (ENSRNOG00000000907) #32	AABR07035203.1 (ENSRNOG00000060198)	Medag (ENSRNOG00000000906) #33	Tex26 (ENSRNOG00000000905) #34	Wdr95 (ENSRNOG00000000904)	Hsph1 (ENSRNOG00000000902) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1878	Usp12 (ENSNGAG00000023867)	ENSNGAG00000012493	ENSNGAG00000022375	Rasl11a (ENSNGAG00000021721)	Gtf3a (ENSNGAG00000023691)	Mtif3 (ENSNGAG00000022911)	Lnx2 (ENSNGAG00000010972)	Polr1d (ENSNGAG00000006014)	ENSNGAG00000019459	ENSNGAG00000020643	Gsx1 (ENSNGAG00000013964)	ENSNGAG00000011527	Pdx1 (ENSNGAG00000024275)	Cdx2 (ENSNGAG00000019299)	Flt3 (ENSNGAG00000022203)	Pan3 (ENSNGAG00000005671) #22	Flt1 (ENSNGAG00000022615) #23	ENSNGAG00000019389 #24	Slc46a3 (ENSNGAG00000023221) #25	ENSNGAG00000022087	ENSNGAG00000011243 ##26	ENSNGAG00000023043 #26	Slc7a1 (ENSNGAG00000011095) #27	Ubl3 (ENSNGAG00000021531) #28	Katnal1 (ENSNGAG00000018344) #29	ENSNGAG00000020735 #30	Uspl1 (ENSNGAG00000021450) #31	Alox5ap (ENSNGAG00000010455) #32	Medag (ENSNGAG00000021713) #33	Tex26 (ENSNGAG00000016306) #34	ENSNGAG00000021744
Lesser Egyptian jerboa	MODERN SPECIES	73	Cdk8 (ENSJJAG00000009532)	Wasf3 (ENSJJAG00000018294)	Gpr12 (ENSJJAG00000012507)	Usp12 (ENSJJAG00000019341)	Rasl11a (ENSJJAG00000020910)	Gtf3a (ENSJJAG00000011501)	Mtif3 (ENSJJAG00000013006)	Lnx2 (ENSJJAG00000014998)	ENSJJAG00000022671	ENSJJAG00000009076	Gsx1 (ENSJJAG00000021574)	Pdx1 (ENSJJAG00000017468)	Cdx2 (ENSJJAG00000010229)	Urad (ENSJJAG00000022682)	Flt3 (ENSJJAG00000004796)	Pan3 (ENSJJAG00000013560) #22	Flt1 (ENSJJAG00000009276) #23	Pomp (ENSJJAG00000014017) #24	Slc46a3 (ENSJJAG00000015117) #25	ENSJJAG00000008307 #26	Slc7a1 (ENSJJAG00000022034) #27	Ubl3 (ENSJJAG00000016514) #28	Katnal1 (ENSJJAG00000011429) #29	ENSJJAG00000000696 ##30	ENSJJAG00000014544 #31	Alox5ap (ENSJJAG00000004614) #32	Medag (ENSJJAG00000017396) #33	Tex26 (ENSJJAG00000007098) #34	Wdr95 (ENSJJAG00000015306)	Hsph1 (ENSJJAG00000000436) #35	B3glct (ENSJJAG00000022078)
Kangaroo rat	MODERN SPECIES	421	Wasf3 (ENSDORG00000003345)	Gpr12 (ENSDORG00000011141)	Usp12 (ENSDORG00000009137)	ENSDORG00000002224	ENSDORG00000002226	Rasl11a (ENSDORG00000026016)	Gtf3a (ENSDORG00000006079)	ENSDORG00000006081	Lnx2 (ENSDORG00000013453)	Polr1d (ENSDORG00000029155)	Gsx1 (ENSDORG00000029182)	Pdx1 (ENSDORG00000008418)	Cdx2 (ENSDORG00000005495)	Urad (ENSDORG00000025006)	Flt3 (ENSDORG00000010727)	Pan3 (ENSDORG00000014727) #22	Flt1 (ENSDORG00000014729) #23	Pomp (ENSDORG00000012432) #24	Slc46a3 (ENSDORG00000012433) #25	ENSDORG00000025782 #26	Slc7a1 (ENSDORG00000006086) #27	ENSDORG00000026706	Ubl3 (ENSDORG00000026903) #28	Katnal1 (ENSDORG00000012794) #29	ENSDORG00000027930 ##30	Uspl1 (ENSDORG00000007790) #31	Alox5ap (ENSDORG00000006041) #32	Medag (ENSDORG00000008557) #33	ENSDORG00000008558 #34	Wdr95 (ENSDORG00000026485)	ENSDORG00000014903 #35
Lagomorpha	ANCESTRAL SPECIES	166				ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27
Rabbit	MODERN SPECIES	468			USP12 (ENSOCUG00000007088)	ENSOCUG00000002506	RASL11A (ENSOCUG00000008121)	ENSOCUG00000038419	GTF3A (ENSOCUG00000011713)	MTIF3 (ENSOCUG00000011721)	LNX2 (ENSOCUG00000015683)	ENSOCUG00000015706	GSX1 (ENSOCUG00000023424)	PDX1 (ENSOCUG00000004891)	CDX2 (ENSOCUG00000004893)	URAD (ENSOCUG00000026219)	FLT3 (ENSOCUG00000004897)	PAN3 (ENSOCUG00000008509) #22	FLT1 (ENSOCUG00000008523) #23	POMP (ENSOCUG00000010137) #24	SLC46A3 (ENSOCUG00000010129) #25	ENSOCUG00000013473 #26	ENSOCUG00000030839 #26	SLC7A1 (ENSOCUG00000013493) #27
Pika	MODERN SPECIES	2256																PAN3 (ENSOPRG00000016465) #22	FLT1 (ENSOPRG00000016484) #23	POMP (ENSOPRG00000016517) #24	SLC46A3 (ENSOPRG00000016527) #25
Tree shrew	MODERN SPECIES	2583																PAN3 (ENSTBEG00000017359) #22	FLT1 (ENSTBEG00000009960) #23
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967
Eulipotyphla	ANCESTRAL SPECIES	1148																ENSGT00390000001504 #22	ENSGT00940000158713 #23
Common shrew	MODERN SPECIES	3681																PAN3 (ENSSARG00000012201) #22
Hedgehog	MODERN SPECIES	4760																PAN3 (ENSEEUG00000014833) #22	FLT1 (ENSEEUG00000014914) #23
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Suina	ANCESTRAL SPECIES	29	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Chacoan peccary	MODERN SPECIES	216	GPR12 (ENSCWAG00000018600)	ENSCWAG00000018581	USP12 (ENSCWAG00000018548)	RPL21 (ENSCWAG00000018513)	RASL11A (ENSCWAG00000018481)	ENSCWAG00000018472	GTF3A (ENSCWAG00000018454)	MTIF3 (ENSCWAG00000018433)	LNX2 (ENSCWAG00000018415)	POLR1D (ENSCWAG00000018355)	GSX1 (ENSCWAG00000018331)	PDX1 (ENSCWAG00000018319)	CDX2 (ENSCWAG00000018265)	URAD (ENSCWAG00000018244)	FLT3 (ENSCWAG00000018108)	PAN3 (ENSCWAG00000018033) #22	FLT1 (ENSCWAG00000017867) #23	ENSCWAG00000017809	POMP (ENSCWAG00000017771) #24	SLC46A3 (ENSCWAG00000017732) #25	MTUS2 (ENSCWAG00000017501) #26	SLC7A1 (ENSCWAG00000017449) #27	UBL3 (ENSCWAG00000017400) #28	KATNAL1 (ENSCWAG00000017366) #29	HMGB1 (ENSCWAG00000017323) #30	USPL1 (ENSCWAG00000017300) #31	ALOX5AP (ENSCWAG00000017261) #32	MEDAG (ENSCWAG00000017233) #33	TEX26 (ENSCWAG00000017184) #34	ENSCWAG00000017090	HSPH1 (ENSCWAG00000016864) #35
Pig	MODERN SPECIES	2	WASF3 (ENSSSCG00000009300)	ENSSSCG00000042074	GPR12 (ENSSSCG00000009301)	USP12 (ENSSSCG00000009302)	ENSSSCG00000009303	RASL11A (ENSSSCG00000039890)	GTF3A (ENSSSCG00000009305)	MTIF3 (ENSSSCG00000037313)	LNX2 (ENSSSCG00000009308)	POLR1D (ENSSSCG00000009310)	GSX1 (ENSSSCG00000009313)	PDX1 (ENSSSCG00000055811)	CDX2 (ENSSSCG00000009317)	ENSSSCG00000009316	FLT3 (ENSSSCG00000009314)	PAN3 (ENSSSCG00000009319) #22	FLT1 (ENSSSCG00000009320) #23	POMP (ENSSSCG00000037170) #24	SLC46A3 (ENSSSCG00000009322) #25	MTUS2 (ENSSSCG00000025996) #26	SLC7A1 (ENSSSCG00000029456) #27	ENSSSCG00000035992 #28	KATNAL1 (ENSSSCG00000009326) #29	ENSSSCG00000009327 ##30	USPL1 (ENSSSCG00000028065) #31	ALOX5AP (ENSSSCG00000009330) #32	MEDAG (ENSSSCG00000009331) #33	TEX26 (ENSSSCG00000046261) #34	ENSSSCG00000009333	HSPH1 (ENSSSCG00000009334) #35	B3GLCT (ENSSSCG00000009335)
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Camelidae	ANCESTRAL SPECIES	14	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499	ENSGT00940000158948.b
Alpaca	MODERN SPECIES	137															FLT3 (ENSVPAG00000006354)	PAN3 (ENSVPAG00000006357) #22	FLT1 (ENSVPAG00000006361) #23
Arabian camel	MODERN SPECIES	5	CDK8 (ENSCDRG00005021779)	WASF3 (ENSCDRG00005021785)	GPR12 (ENSCDRG00005021787)	USP12 (ENSCDRG00005021790)	ENSCDRG00005021795	RASL11A (ENSCDRG00005021802)	GTF3A (ENSCDRG00005021807)	MTIF3 (ENSCDRG00005003341)	LNX2 (ENSCDRG00005003360)	POLR1D (ENSCDRG00005003401)	GSX1 (ENSCDRG00005003464)	PDX1 (ENSCDRG00005003496)	ENSCDRG00005003530	ENSCDRG00005003574	FLT3 (ENSCDRG00005003607)	PAN3 (ENSCDRG00005003669) #22	FLT1 (ENSCDRG00005003978) #23	POMP (ENSCDRG00005004772) #24	SLC46A3 (ENSCDRG00005004813) #25	ENSCDRG00005004864 #26	ENSCDRG00005004898 #26	SLC7A1 (ENSCDRG00005004941) #27	UBL3 (ENSCDRG00005005011) #28	KATNAL1 (ENSCDRG00005005025) #29	HMGB1 (ENSCDRG00005005045) #30	USPL1 (ENSCDRG00005005085) #31	ALOX5AP (ENSCDRG00005005116) #32	MEDAG (ENSCDRG00005005141) #33	TEX26 (ENSCDRG00005005163) #34	HSPH1 (ENSCDRG00005005202) #35	B3GLCT (ENSCDRG00005005450)
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Cetacea	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B.r #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B.r #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00510000047760.j	ENSGT00950000183026.B.r #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Narwhal	MODERN SPECIES	315	WASF3 (ENSMMNG00015021063)	GPR12 (ENSMMNG00015021041)	USP12 (ENSMMNG00015021025)	ENSMMNG00015020992	RASL11A (ENSMMNG00015020985)	ENSMMNG00015020968	GTF3A (ENSMMNG00015020949)	MTIF3 (ENSMMNG00015020934)	LNX2 (ENSMMNG00015020919)	ENSMMNG00015020896	GSX1 (ENSMMNG00015020877)	PDX1 (ENSMMNG00015020863)	CDX2 (ENSMMNG00015020842)	URAD (ENSMMNG00015020821)	FLT3 (ENSMMNG00015020792)	PAN3 (ENSMMNG00015020615) #22	FLT1 (ENSMMNG00015020525) #23	ENSMMNG00015020477 #24	SLC46A3 (ENSMMNG00015020455) #25	MTUS2 (ENSMMNG00015020336) #26	SLC7A1 (ENSMMNG00015020307) #27	UBL3 (ENSMMNG00015020289) #28	KATNAL1 (ENSMMNG00015020263) #29	HMGB1 (ENSMMNG00015020245) #30	USPL1 (ENSMMNG00015020212) #31	ALOX5AP (ENSMMNG00015020175) #32	MEDAG (ENSMMNG00015020156) #33	HSPH1 (ENSMMNG00015020078) #35	B3GLCT (ENSMMNG00015019951)	RXFP2 (ENSMMNG00015019687)	FRY (ENSMMNG00015019379)
Beluga whale	MODERN SPECIES	29	WASF3 (ENSDLEG00000014723)	GPR12 (ENSDLEG00000014734)	USP12 (ENSDLEG00000014742)	RPL21 (ENSDLEG00000014757)	RASL11A (ENSDLEG00000014782)	GTF3A (ENSDLEG00000014795)	MTIF3 (ENSDLEG00000014809)	LNX2 (ENSDLEG00000014818)	POLR1D (ENSDLEG00000014833)	ENSDLEG00000014844	GSX1 (ENSDLEG00000014854)	PDX1 (ENSDLEG00000014860)	CDX2 (ENSDLEG00000014871)	ENSDLEG00000014887	FLT3 (ENSDLEG00000014957)	PAN3 (ENSDLEG00000015462) #22	FLT1 (ENSDLEG00000015551) #23	ENSDLEG00000015594 #24	SLC46A3 (ENSDLEG00000015606) #25	ENSDLEG00000015614	MTUS2 (ENSDLEG00000015621) #26	SLC7A1 (ENSDLEG00000015661) #27	UBL3 (ENSDLEG00000015684) #28	KATNAL1 (ENSDLEG00000015700) #29	HMGB1 (ENSDLEG00000005222) ##30	USPL1 (ENSDLEG00000005228) #31	ALOX5AP (ENSDLEG00000005233) #32	MEDAG (ENSDLEG00000005244) #33	ENSDLEG00000005251	HSPH1 (ENSDLEG00000005268) #35	B3GLCT (ENSDLEG00000005311)
Vaquita	MODERN SPECIES	9	WASF3 (ENSPSNG00000009017)	ENSPSNG00000009063	GPR12 (ENSPSNG00000009076)	USP12 (ENSPSNG00000009102)	ENSPSNG00000009136	RASL11A (ENSPSNG00000009220)	GTF3A (ENSPSNG00000009270)	MTIF3 (ENSPSNG00000009318)	LNX2 (ENSPSNG00000009360)	ENSPSNG00000009434	GSX1 (ENSPSNG00000009508)	PDX1 (ENSPSNG00000009545)	CDX2 (ENSPSNG00000009587)	URAD (ENSPSNG00000009637)	FLT3 (ENSPSNG00000009789)	PAN3 (ENSPSNG00000010591) #22	FLT1 (ENSPSNG00000010996) #23	ENSPSNG00000011404	ENSPSNG00000011451 #24	SLC46A3 (ENSPSNG00000011519) #25	ENSPSNG00000011610	ENSPSNG00000011712 #26	SLC7A1 (ENSPSNG00000011868) #27	UBL3 (ENSPSNG00000011923) #28	KATNAL1 (ENSPSNG00000011976) #29	HMGB1 (ENSPSNG00000012042) #30	USPL1 (ENSPSNG00000012125) #31	ALOX5AP (ENSPSNG00000012197) #32	ENSPSNG00000011745	MEDAG (ENSPSNG00000011804) #33	HSPH1 (ENSPSNG00000011882) #35
Dolphin	MODERN SPECIES	632													PDX1 (ENSTTRG00000002811)	URAD (ENSTTRG00000002812)	FLT3 (ENSTTRG00000002813)	PAN3 (ENSTTRG00000002814) #22
Sperm whale	MODERN SPECIES	4	WASF3 (ENSPCTG00005012829)	GPR12 (ENSPCTG00005012894)	ENSPCTG00005012908	USP12 (ENSPCTG00005012963)	RPL21 (ENSPCTG00005013013)	RASL11A (ENSPCTG00005013101)	GTF3A (ENSPCTG00005013180)	MTIF3 (ENSPCTG00005013236)	LNX2 (ENSPCTG00005013292)	POLR1D (ENSPCTG00005013390)	GSX1 (ENSPCTG00005013569)	PDX1 (ENSPCTG00005013620)	CDX2 (ENSPCTG00005013676)	ENSPCTG00005013732	FLT3 (ENSPCTG00005013790)	PAN3 (ENSPCTG00005014160) #22	FLT1 (ENSPCTG00005014294) #23	POMP (ENSPCTG00005014527) #24	SLC46A3 (ENSPCTG00005014585) #25	ENSPCTG00005014618	MTUS2 (ENSPCTG00005014659) #26	SLC7A1 (ENSPCTG00005014850) #27	UBL3 (ENSPCTG00005014919) #28	KATNAL1 (ENSPCTG00005014985) #29	HMGB1 (ENSPCTG00005015034) #30	USPL1 (ENSPCTG00005015111) #31	ALOX5AP (ENSPCTG00005015171) #32	MEDAG (ENSPCTG00005015216) #33	TEX26 (ENSPCTG00005015295) #34	HSPH1 (ENSPCTG00005015496) #35	B3GLCT (ENSPCTG00005016496)
Blue whale	MODERN SPECIES	9	WASF3 (ENSBMSG00010014112)	GPR12 (ENSBMSG00010014207)	USP12 (ENSBMSG00010014225)	ENSBMSG00010014255	RASL11A (ENSBMSG00010014298)	ENSBMSG00010014311	GTF3A (ENSBMSG00010014329)	MTIF3 (ENSBMSG00010014375)	LNX2 (ENSBMSG00010014414)	ENSBMSG00010014466	GSX1 (ENSBMSG00010014529)	PDX1 (ENSBMSG00010014538)	CDX2 (ENSBMSG00010014566)	URAD (ENSBMSG00010014592)	FLT3 (ENSBMSG00010014623)	PAN3 (ENSBMSG00010014764) #22	FLT1 (ENSBMSG00010014949) #23	ENSBMSG00010015155 #24	SLC46A3 (ENSBMSG00010015191) #25	ENSBMSG00010015221	ENSBMSG00010015247 #26	SLC7A1 (ENSBMSG00010015357) #27	UBL3 (ENSBMSG00010015451) #28	KATNAL1 (ENSBMSG00010015496) #29	HMGB1 (ENSBMSG00010015522) #30	USPL1 (ENSBMSG00010015554) #31	ALOX5AP (ENSBMSG00010015580) #32	MEDAG (ENSBMSG00010015612) #33	TEX26 (ENSBMSG00010015652) #34	ENSBMSG00010015688	HSPH1 (ENSBMSG00010015771) #35
Pecora	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Yarkand deer	MODERN SPECIES	23	GPR12 (ENSCHYG00000019276)	USP12 (ENSCHYG00000019156)	ENSCHYG00000019062	RASL11A (ENSCHYG00000019009)	ENSCHYG00000018814	MTIF3 (ENSCHYG00000018756)	LNX2 (ENSCHYG00000018648)	ENSCHYG00000018627	ENSCHYG00000018475	GSX1 (ENSCHYG00000018439)	PDX1 (ENSCHYG00000018394)	CDX2 (ENSCHYG00000018350)	URAD (ENSCHYG00000018294)	FLT3 (ENSCHYG00000017983)	ENSCHYG00000017919	PAN3 (ENSCHYG00000017249) #22	FLT1 (ENSCHYG00000016765) #23	ENSCHYG00000016696	ENSCHYG00000016630 #24	SLC46A3 (ENSCHYG00000016561) #25	MTUS2 (ENSCHYG00000016049) #26	SLC7A1 (ENSCHYG00000015804) #27	UBL3 (ENSCHYG00000015723) #28	KATNAL1 (ENSCHYG00000015536) #29	ENSCHYG00000015436 ##30	USPL1 (ENSCHYG00000015344) #31	ALOX5AP (ENSCHYG00000015250) #32	ENSCHYG00000015226	MEDAG (ENSCHYG00000015182) #33	TEX26 (ENSCHYG00000015069) #34	ENSCHYG00000014786
Percora_a	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Siberian musk deer	MODERN SPECIES	18	WASF3 (ENSMMSG00000003196)	GPR12 (ENSMMSG00000003186)	USP12 (ENSMMSG00000003167)	ENSMMSG00000003141	RASL11A (ENSMMSG00000003132)	ENSMMSG00000003107	MTIF3 (ENSMMSG00000003094)	LNX2 (ENSMMSG00000003075)	POLR1D (ENSMMSG00000003040)	GSX1 (ENSMMSG00000003020)	ENSMMSG00000003007	PDX1 (ENSMMSG00000002992)	CDX2 (ENSMMSG00000002973)	URAD (ENSMMSG00000002960)	FLT3 (ENSMMSG00000002901)	PAN3 (ENSMMSG00000002825) #22	FLT1 (ENSMMSG00000002716) #23	ENSMMSG00000002681 #24	SLC46A3 (ENSMMSG00000002652) #25	MTUS2 (ENSMMSG00000002573) #26	SLC7A1 (ENSMMSG00000002527) #27	UBL3 (ENSMMSG00000002504) #28	KATNAL1 (ENSMMSG00000002485) #29	ENSMMSG00000002453 ##30	USPL1 (ENSMMSG00000002424) #31	ALOX5AP (ENSMMSG00000002405) #32	MEDAG (ENSMMSG00000002386) #33	TEX26 (ENSMMSG00000002369) #34	HSPH1 (ENSMMSG00000002127) #35	B3GLCT (ENSMMSG00000002053)	RXFP2 (ENSMMSG00000001942)
Bovidae	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Bovinae	ANCESTRAL SPECIES	29	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Bos	ANCESTRAL SPECIES	28	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Bos_b	ANCESTRAL SPECIES	33	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT01100000263481.n.a.b.b.a.b.b.a.a.b.a.b	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Hybrid Bos Indicus	MODERN SPECIES	3	CDK8 (ENSBIXG00005009401)	WASF3 (ENSBIXG00005009436)	GPR12 (ENSBIXG00005005366)	USP12 (ENSBIXG00005000510)	ENSBIXG00005009506	RASL11A (ENSBIXG00005009524)	MTIF3 (ENSBIXG00005000533)	ENSBIXG00005009581	LNX2 (ENSBIXG00005009616)	POLR1D (ENSBIXG00005009666)	GSX1 (ENSBIXG00005009693)	PDX1 (ENSBIXG00005005368)	CDX2 (ENSBIXG00005000565)	ENSBIXG00005000568	FLT3 (ENSBIXG00005005466)	PAN3 (ENSBIXG00005005472) #22	FLT1 (ENSBIXG00005010159) #23	POMP (ENSBIXG00005010225) #24	SLC46A3 (ENSBIXG00005000810) #25	MTUS2 (ENSBIXG00005010291) #26	SLC7A1 (ENSBIXG00005006772) #27	UBL3 (ENSBIXG00005010348) #28	ENSBIXG00005000793	KATNAL1 (ENSBIXG00005000876) #29	ENSBIXG00005006774	ENSBIXG00005010515 ##30	USPL1 (ENSBIXG00005010560) #31	ALOX5AP (ENSBIXG00005000697) #32	MEDAG (ENSBIXG00005010602) #33	TEX26 (ENSBIXG00005010612) #34	ENSBIXG00005000923
Cow	MODERN SPECIES	3	WASF3 (ENSBTAG00000014619)	GPR12 (ENSBTAG00000010769)	USP12 (ENSBTAG00000017179)	RPL21 (ENSBTAG00000001648)	RASL11A (ENSBTAG00000005244)	GTF3A (ENSBTAG00000012600)	MTIF3 (ENSBTAG00000020530)	LNX2 (ENSBTAG00000015614)	POLR1D (ENSBTAG00000008642)	ENSBTAG00000048386	GSX1 (ENSBTAG00000009166)	PDX1 (ENSBTAG00000010690)	CDX2 (ENSBTAG00000001819)	URAD (ENSBTAG00000013819)	FLT3 (ENSBTAG00000018572)	PAN3 (ENSBTAG00000009912) #22	FLT1 (ENSBTAG00000016915) #23	POMP (ENSBTAG00000014024) #24	MTUS2 (ENSBTAG00000001094) #26	SLC7A1 (ENSBTAG00000018577) #27	UBL3 (ENSBTAG00000012170) #28	ENSBTAG00000052411	KATNAL1 (ENSBTAG00000009340) #29	HMGB1 (ENSBTAG00000018103) #30	USPL1 (ENSBTAG00000001178) #31	ALOX5AP (ENSBTAG00000013201) #32	MEDAG (ENSBTAG00000008271) #33	TEX26 (ENSBTAG00000033386) #34	ENSBTAG00000016052	HSPH1 (ENSBTAG00000005012) #35	B3GLCT (ENSBTAG00000033412)
Bos_a	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00940000154361.A	ENSGT00390000003643	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Domestic yak	MODERN SPECIES	6	ENSBGRG00000004746	USP12 (ENSBGRG00000004775)	ENSBGRG00000004884	RASL11A (ENSBGRG00000004923)	GTF3A (ENSBGRG00000004973)	MTIF3 (ENSBGRG00000005098)	LNX2 (ENSBGRG00000005122)	ENSBGRG00000005177	GSX1 (ENSBGRG00000005224)	ENSBGRG00000005241	ENSBGRG00000005252	PDX1 (ENSBGRG00000005259)	CDX2 (ENSBGRG00000005271)	ENSBGRG00000005297	FLT3 (ENSBGRG00000005369)	PAN3 (ENSBGRG00000005813) #22	ENSBGRG00000006167	ENSBGRG00000006327 #23	POMP (ENSBGRG00000006553) #24	SLC46A3 (ENSBGRG00000006624) #25	MTUS2 (ENSBGRG00000006670) #26	SLC7A1 (ENSBGRG00000006751) #27	UBL3 (ENSBGRG00000006856) #28	KATNAL1 (ENSBGRG00000006924) #29	ENSBGRG00000007092 ##30	ENSBGRG00000007221	USPL1 (ENSBGRG00000007239) #31	ALOX5AP (ENSBGRG00000007328) #32	MEDAG (ENSBGRG00000007441) #33	TEX26 (ENSBGRG00000007537) #34	ENSBGRG00000007607
Wild yak	MODERN SPECIES	1371															FLT3 (ENSBMUG00000023185)	PAN3 (ENSBMUG00000023150) #22	FLT1 (ENSBMUG00000023081) #23	POMP (ENSBMUG00000023007) #24	SLC46A3 (ENSBMUG00000023002) #25	MTUS2 (ENSBMUG00000022991) #26	SLC7A1 (ENSBMUG00000022964) #27	UBL3 (ENSBMUG00000022941) #28	KATNAL1 (ENSBMUG00000022930) #29	HMGB1 (ENSBMUG00000022917) #30	USPL1 (ENSBMUG00000022880) #31	ALOX5AP (ENSBMUG00000022869) #32	MEDAG (ENSBMUG00000022857) #33	TEX26 (ENSBMUG00000022841) #34	ENSBMUG00000022823	HSPH1 (ENSBMUG00000022797) #35	ENSBMUG00000022779
American bison	MODERN SPECIES	3213	WASF3 (ENSBBBG00000002463)	GPR12 (ENSBBBG00000012732)	USP12 (ENSBBBG00000002455)	ENSBBBG00000012692	RASL11A (ENSBBBG00000007545)	GTF3A (ENSBBBG00000012669)	ENSBBBG00000012643	LNX2 (ENSBBBG00000012639)	POLR1D (ENSBBBG00000012618)	ENSBBBG00000012613	GSX1 (ENSBBBG00000001841)	PDX1 (ENSBBBG00000001839)	ENSBBBG00000012601	URAD (ENSBBBG00000008107)	FLT3 (ENSBBBG00000012586)	PAN3 (ENSBBBG00000012554) #22	FLT1 (ENSBBBG00000012485) #23	POMP (ENSBBBG00000002357) #24	SLC46A3 (ENSBBBG00000012388) #25
Caprinae	ANCESTRAL SPECIES	28	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424.g	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643.k	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35	ENSGT00940000155499
Goat	MODERN SPECIES	3	WASF3 (ENSCHIG00000017657)	GPR12 (ENSCHIG00000007944)	USP12 (ENSCHIG00000006817)	RPL21 (ENSCHIG00000021720)	RASL11A (ENSCHIG00000016902)	ENSCHIG00000021040	ENSCHIG00000026996	LNX2 (ENSCHIG00000024542)	POLR1D (ENSCHIG00000021910)	ENSCHIG00000014902	GSX1 (ENSCHIG00000026107)	PDX1 (ENSCHIG00000016212)	CDX2 (ENSCHIG00000024755)	ENSCHIG00000015696	FLT3 (ENSCHIG00000006089)	PAN3 (ENSCHIG00000010876) #22	FLT1 (ENSCHIG00000019587) #23	ENSCHIG00000007021 #24	SLC46A3 (ENSCHIG00000006252) #25	MTUS2 (ENSCHIG00000014951) #26	SLC7A1 (ENSCHIG00000017131) #27	UBL3 (ENSCHIG00000005881) #28	KATNAL1 (ENSCHIG00000011417) #29	HMGB1 (ENSCHIG00000018473) #30	USPL1 (ENSCHIG00000025535) #31	ALOX5AP (ENSCHIG00000020532) #32	MEDAG (ENSCHIG00000019733) #33	TEX26 (ENSCHIG00000013376) #34	HSPH1 (ENSCHIG00000003518) #35	B3GLCT (ENSCHIG00000016248)	RXFP2 (ENSCHIG00000007689)
Rambouillet Sheep	MODERN SPECIES	1	GPR12 (ENSOARG00020012619)	USP12 (ENSOARG00020012488)	ENSOARG00020012435	ENSOARG00020012335	RASL11A (ENSOARG00020012287)	ENSOARG00020012160	ENSOARG00020012106	MTIF3 (ENSOARG00020012058)	LNX2 (ENSOARG00020012002)	POLR1D (ENSOARG00020011900)	GSX1 (ENSOARG00020011857)	PDX1 (ENSOARG00020011821)	CDX2 (ENSOARG00020011783)	URAD (ENSOARG00020011747)	FLT3 (ENSOARG00020011519)	PAN3 (ENSOARG00020010540) #22	FLT1 (ENSOARG00020010103) #23	ENSOARG00020010005 #24	SLC46A3 (ENSOARG00020009919) #25	ENSOARG00020009812 #26	SLC7A1 (ENSOARG00020009646) #27	UBL3 (ENSOARG00020009591) #28	KATNAL1 (ENSOARG00020009464) #29	HMGB1 (ENSOARG00020009396) #30	ALOX5AP (ENSOARG00020009284) #32	MEDAG (ENSOARG00020009224) #33	TEX26 (ENSOARG00020009149) #34	ENSOARG00020008926	HSPH1 (ENSOARG00020008491) #35	B3GLCT (ENSOARG00020008264)	ENSOARG00020008205
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Equus	ANCESTRAL SPECIES	26	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Donkey	MODERN SPECIES	29	GPR12 (ENSEASG00005035884)	USP12 (ENSEASG00005022511)	ENSEASG00005022501	RASL11A (ENSEASG00005034471)	ENSEASG00005022495	MTIF3 (ENSEASG00005022492)	LNX2 (ENSEASG00005022490)	POLR1D (ENSEASG00005022487)	ENSEASG00005035501	GSX1 (ENSEASG00005022483)	PDX1 (ENSEASG00005022482)	CDX2 (ENSEASG00005022479)	ENSEASG00005028208	ENSEASG00005003450	FLT3 (ENSEASG00005022471)	PAN3 (ENSEASG00005022467) #22	ENSEASG00005029804	ENSEASG00005022461 #23	ENSEASG00005029421 #24	SLC46A3 (ENSEASG00005022457) #25	MTUS2 (ENSEASG00005022449) #26	SLC7A1 (ENSEASG00005022432) #27	UBL3 (ENSEASG00005022423) #28	KATNAL1 (ENSEASG00005022416) #29	HMGB1 (ENSEASG00005032345) #30	USPL1 (ENSEASG00005022400) #31	ALOX5AP (ENSEASG00005022395) #32	MEDAG (ENSEASG00005022391) #33	TEX26 (ENSEASG00005022387) #34	ENSEASG00005022381	HSPH1 (ENSEASG00005022374) #35
Horse	MODERN SPECIES	8	WASF3 (ENSECAG00000000050)	GPR12 (ENSECAG00000059623)	ENSECAG00000036907	ENSECAG00000045376	USP12 (ENSECAG00000006779)	RASL11A (ENSECAG00000012858)	GTF3A (ENSECAG00000014803)	MTIF3 (ENSECAG00000016697)	LNX2 (ENSECAG00000017219)	ENSECAG00000021095	GSX1 (ENSECAG00000035168)	PDX1 (ENSECAG00000000679)	CDX2 (ENSECAG00000027754)	ENSECAG00000002049	FLT3 (ENSECAG00000002171)	PAN3 (ENSECAG00000014810) #22	FLT1 (ENSECAG00000021700)	ENSECAG00000049171 #23	POMP (ENSECAG00000011951) #24	ENSECAG00000048907	SLC46A3 (ENSECAG00000011432) #25	MTUS2 (ENSECAG00000013935) #26	SLC7A1 (ENSECAG00000015413) #27	UBL3 (ENSECAG00000001318) #28	KATNAL1 (ENSECAG00000004830) #29	HMGB1 (ENSECAG00000008439) ##30	USPL1 (ENSECAG00000011889) #31	ALOX5AP (ENSECAG00000012371) #32	MEDAG (ENSECAG00000014702) #33	TEX26 (ENSECAG00000015300) #34	ENSECAG00000016853
Chiroptera	ANCESTRAL SPECIES	66	ENSGT00940000157104.m.a	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499	ENSGT00940000158948.b
Megabat	MODERN SPECIES	1410																PAN3 (ENSPVAG00000001113) #22	FLT1 (ENSPVAG00000001114) #23
Microchiroptera	ANCESTRAL SPECIES	46	ENSGT00940000157104.m.a	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499	ENSGT00940000158948.b
Greater horseshoe bat	MODERN SPECIES	22	ENSRFEG00010003754	GPR12 (ENSRFEG00010003761)	USP12 (ENSRFEG00010003775)	ENSRFEG00010003789	RASL11A (ENSRFEG00010003821)	GTF3A (ENSRFEG00010003845)	MTIF3 (ENSRFEG00010003873)	LNX2 (ENSRFEG00010003884)	ENSRFEG00010003922	ENSRFEG00010003942	GSX1 (ENSRFEG00010003946)	PDX1 (ENSRFEG00010003956)	CDX2 (ENSRFEG00010003965)	ENSRFEG00010003975	FLT3 (ENSRFEG00010004003)	PAN3 (ENSRFEG00010004077) #22	FLT1 (ENSRFEG00010004193) #23	ENSRFEG00010004318 #24	SLC46A3 (ENSRFEG00010004332) #25	MTUS2 (ENSRFEG00010004361) #26	ENSRFEG00010004420 ##30	SLC7A1 (ENSRFEG00010000293) #27	UBL3 (ENSRFEG00010000414) #28	KATNAL1 (ENSRFEG00010000476) #29	HMGB1 (ENSRFEG00010000531) #30	USPL1 (ENSRFEG00010000567) #31	ALOX5AP (ENSRFEG00010000601) #32	MEDAG (ENSRFEG00010000622) #33	TEX26 (ENSRFEG00010000643) #34	HSPH1 (ENSRFEG00010000709) #35	B3GLCT (ENSRFEG00010000860)
Microbat	MODERN SPECIES	1164				GPR12 (ENSMLUG00000002365)	USP12 (ENSMLUG00000007510)	ENSMLUG00000010093	RASL11A (ENSMLUG00000016335)	GTF3A (ENSMLUG00000002158)	MTIF3 (ENSMLUG00000002161)	LNX2 (ENSMLUG00000010946)	ENSMLUG00000025151	PDX1 (ENSMLUG00000010639)	CDX2 (ENSMLUG00000002563)	ENSMLUG00000002576	FLT3 (ENSMLUG00000002582)	PAN3 (ENSMLUG00000004348) #22	FLT1 (ENSMLUG00000004358) #23	ENSMLUG00000010322 #24	SLC46A3 (ENSMLUG00000006699) #25
Carnivora	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967
Felidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Panthera	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
leopard	MODERN SPECIES	14	CDK8 (ENSPPRG00000023432)	WASF3 (ENSPPRG00000022988)	GPR12 (ENSPPRG00000017596)	USP12 (ENSPPRG00000000510)	ENSPPRG00000001012	RASL11A (ENSPPRG00000001350)	GTF3A (ENSPPRG00000002368)	MTIF3 (ENSPPRG00000002497)	LNX2 (ENSPPRG00000002783)	POLR1D (ENSPPRG00000003381)	GSX1 (ENSPPRG00000004333)	PDX1 (ENSPPRG00000004534)	CDX2 (ENSPPRG00000004823)	ENSPPRG00000005097	FLT3 (ENSPPRG00000005326)	PAN3 (ENSPPRG00000008505) #22	ENSPPRG00000011363	ENSPPRG00000013104 #23	POMP (ENSPPRG00000013840) #24	SLC46A3 (ENSPPRG00000015693) #25	ENSPPRG00000016401 #26	SLC7A1 (ENSPPRG00000017628) #27	UBL3 (ENSPPRG00000019662) #28	KATNAL1 (ENSPPRG00000022045) #29	HMGB1 (ENSPPRG00000022869) #30	USPL1 (ENSPPRG00000000053) #31	ALOX5AP (ENSPPRG00000000293) #32	MEDAG (ENSPPRG00000000734) #33	TEX26 (ENSPPRG00000001047) #34	ENSPPRG00000002151	HSPH1 (ENSPPRG00000005057) #35
lion	MODERN SPECIES	1	CDK8 (ENSPLOG00000004108)	WASF3 (ENSPLOG00000004088)	GPR12 (ENSPLOG00000004075)	USP12 (ENSPLOG00000004064)	ENSPLOG00000021394	RASL11A (ENSPLOG00000021369)	GTF3A (ENSPLOG00000021339)	MTIF3 (ENSPLOG00000021318)	LNX2 (ENSPLOG00000021288)	ENSPLOG00000021249	GSX1 (ENSPLOG00000021227)	PDX1 (ENSPLOG00000021216)	CDX2 (ENSPLOG00000021193)	URAD (ENSPLOG00000021175)	FLT3 (ENSPLOG00000021081)	PAN3 (ENSPLOG00000020895) #22	FLT1 (ENSPLOG00000020410) #23	POMP (ENSPLOG00000020240) #24	SLC46A3 (ENSPLOG00000020203) #25	ENSPLOG00000020066 #26	SLC7A1 (ENSPLOG00000020023) #27	UBL3 (ENSPLOG00000019992) #28	KATNAL1 (ENSPLOG00000019942) #29	ENSPLOG00000019888 ##30	USPL1 (ENSPLOG00000019841) #31	ALOX5AP (ENSPLOG00000019807) #32	MEDAG (ENSPLOG00000019748) #33	TEX26 (ENSPLOG00000019557) #34	ENSPLOG00000019458	HSPH1 (ENSPLOG00000019185) #35	B3GLCT (ENSPLOG00000019047)
Tiger	MODERN SPECIES	38	CDK8 (ENSPTIG00000021301)	WASF3 (ENSPTIG00000020649)	GPR12 (ENSPTIG00000005107)	USP12 (ENSPTIG00000020368)	ENSPTIG00000020228	RASL11A (ENSPTIG00000019926)	GTF3A (ENSPTIG00000018958)	MTIF3 (ENSPTIG00000018642)	LNX2 (ENSPTIG00000018500)	POLR1D (ENSPTIG00000018137)	ENSPTIG00000017320	GSX1 (ENSPTIG00000016369)	ENSPTIG00000016324	ENSPTIG00000014998	FLT3 (ENSPTIG00000013522)	PAN3 (ENSPTIG00000011675) #22	ENSPTIG00000010147	ENSPTIG00000007575 #23	POMP (ENSPTIG00000007181) #24	SLC46A3 (ENSPTIG00000005724) #25	ENSPTIG00000001385 #26	SLC7A1 (ENSPTIG00000021015) #27	UBL3 (ENSPTIG00000020762) #28	KATNAL1 (ENSPTIG00000020391) #29	ENSPTIG00000020002 ##30	USPL1 (ENSPTIG00000019771) #31	ALOX5AP (ENSPTIG00000019272) #32	MEDAG (ENSPTIG00000018319) #33	TEX26 (ENSPTIG00000017363) #34	ENSPTIG00000016067	HSPH1 (ENSPTIG00000013145) #35
Cat	MODERN SPECIES		CDK8 (ENSFCAG00000027073)	WASF3 (ENSFCAG00000009474)	GPR12 (ENSFCAG00000014524)	USP12 (ENSFCAG00000026620)	ENSFCAG00000006750	RASL11A (ENSFCAG00000006749)	GTF3A (ENSFCAG00000006982)	MTIF3 (ENSFCAG00000006985)	LNX2 (ENSFCAG00000011821)	ENSFCAG00000030162	GSX1 (ENSFCAG00000026793)	PDX1 (ENSFCAG00000034557)	CDX2 (ENSFCAG00000026699)	ENSFCAG00000036126	FLT3 (ENSFCAG00000004539)	PAN3 (ENSFCAG00000018643) #22	FLT1 (ENSFCAG00000013299) #23	POMP (ENSFCAG00000008235) #24	SLC46A3 (ENSFCAG00000008236) #25	MTUS2 (ENSFCAG00000014322) #26	SLC7A1 (ENSFCAG00000014326) #27	UBL3 (ENSFCAG00000027217) #28	KATNAL1 (ENSFCAG00000032001) #29	HMGB1 (ENSFCAG00000000200) #30	USPL1 (ENSFCAG00000022053) #31	ALOX5AP (ENSFCAG00000037195) #32	MEDAG (ENSFCAG00000007544) #33	TEX26 (ENSFCAG00000024146) #34	ENSFCAG00000031325	HSPH1 (ENSFCAG00000007547) #35	B3GLCT (ENSFCAG00000018185)
Caniformia	ANCESTRAL SPECIES	24	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967
Canidae	ANCESTRAL SPECIES	31	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000153229.A.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.a.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00940000153425.a.a.b.a	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00390000011067.A.ib.b	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.a.b.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00940000153425.a.a.b.a	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967
Dog	MODERN SPECIES	17	GPR12 (ENSCAFG00845026068)	ENSCAFG00845026031	USP12 (ENSCAFG00845025960)	RPL21 (ENSCAFG00845025858)	RASL11A (ENSCAFG00845025821)	GTF3A (ENSCAFG00845025723)	MTIF3 (ENSCAFG00845025671)	LNX2 (ENSCAFG00845025569)	POLR1D (ENSCAFG00845025499)	GSX1 (ENSCAFG00845025440)	PDX1 (ENSCAFG00845025401)	CDX2 (ENSCAFG00845025357)	ENSCAFG00845025288	ENSCAFG00845025235	FLT3 (ENSCAFG00845024412)	PAN3 (ENSCAFG00845023866) #22	FLT1 (ENSCAFG00845023188) #23	POMP (ENSCAFG00845022887) #24	SLC46A3 (ENSCAFG00845022832) #25	MTUS2 (ENSCAFG00845022435) #26	SLC7A1 (ENSCAFG00845022314) #27	ENSCAFG00845022280	UBL3 (ENSCAFG00845022214) #28	ENSCAFG00845022193	KATNAL1 (ENSCAFG00845022093) #29	HMGB1 (ENSCAFG00845021967) #30	USPL1 (ENSCAFG00845021869) #31	ALOX5AP (ENSCAFG00845021804) #32	MEDAG (ENSCAFG00845021735) #33	TEX26 (ENSCAFG00845021671) #34	ENSCAFG00845021368
Dingo	MODERN SPECIES	304	USP12 (ENSCAFG00020025315)	ENSCAFG00020025313	RASL11A (ENSCAFG00020025312)	ENSCAFG00020025311	ENSCAFG00020025308	ENSCAFG00020025306	MTIF3 (ENSCAFG00020025304)	LNX2 (ENSCAFG00020025302)	ENSCAFG00020025301	GSX1 (ENSCAFG00020025299)	PDX1 (ENSCAFG00020025298)	CDX2 (ENSCAFG00020025296)	ENSCAFG00020025291	ENSCAFG00020025290	FLT3 (ENSCAFG00020025240)	PAN3 (ENSCAFG00020025181) #22	ENSCAFG00020025175	ENSCAFG00020025171 #23	ENSCAFG00020025170	ENSCAFG00020025169	SLC46A3 (ENSCAFG00020025168) #25	MTUS2 (ENSCAFG00020025161) #26	SLC7A1 (ENSCAFG00020025151) #27	ENSCAFG00020025149	UBL3 (ENSCAFG00020025147) #28	ENSCAFG00020025145	KATNAL1 (ENSCAFG00020025138) #29	ENSCAFG00020025137	ENSCAFG00020025133	ENSCAFG00020025123 ##30	USPL1 (ENSCAFG00020025117) #31
Red fox	MODERN SPECIES	22	GPR12 (ENSVVUG00000009138)	USP12 (ENSVVUG00000009179)	RPL21 (ENSVVUG00000009183)	RASL11A (ENSVVUG00000009191)	GTF3A (ENSVVUG00000009197)	MTIF3 (ENSVVUG00000009207)	LNX2 (ENSVVUG00000009209)	POLR1D (ENSVVUG00000009216)	ENSVVUG00000009220	GSX1 (ENSVVUG00000009230)	ENSVVUG00000009233	PDX1 (ENSVVUG00000009234)	CDX2 (ENSVVUG00000009237)	FLT3 (ENSVVUG00000009247)	ENSVVUG00000009307	PAN3 (ENSVVUG00000009313) #22	FLT1 (ENSVVUG00000009356) #23	POMP (ENSVVUG00000009398) #24	SLC46A3 (ENSVVUG00000009403) #25	MTUS2 (ENSVVUG00000009413) #26	SLC7A1 (ENSVVUG00000009439) #27	ENSVVUG00000009450	UBL3 (ENSVVUG00000009455) #28	KATNAL1 (ENSVVUG00000009499) #29	HMGB1 (ENSVVUG00000009534) #30	USPL1 (ENSVVUG00000009708) #31	ALOX5AP (ENSVVUG00000009718) #32	MEDAG (ENSVVUG00000009731) #33	TEX26 (ENSVVUG00000009744) #34	ENSVVUG00000009779	HSPH1 (ENSVVUG00000010061) #35
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967
Mustelinae	ANCESTRAL SPECIES	109										ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967	ENSGT00940000159635 #35
American mink	MODERN SPECIES	346										ENSNVIG00000002786	GSX1 (ENSNVIG00000002846)	PDX1 (ENSNVIG00000002855)	CDX2 (ENSNVIG00000002864)	URAD (ENSNVIG00000002869)	FLT3 (ENSNVIG00000002880)	PAN3 (ENSNVIG00000002913) #22	FLT1 (ENSNVIG00000002982) #23	ENSNVIG00000003156 #24	S46A3 (ENSNVIG00000003179) #25
Ferret	MODERN SPECIES	364										ENSMPUG00000005164	GSX1 (ENSMPUG00000005153)	PDX1 (ENSMPUG00000005147)	CDX2 (ENSMPUG00000005092)	ENSMPUG00000005088	FLT3 (ENSMPUG00000005073)	PAN3 (ENSMPUG00000004987) #22	FLT1 (ENSMPUG00000004699) #23	POMP (ENSMPUG00000004690) #24	SLC46A3 (ENSMPUG00000004680) #25	ENSMPUG00000004676	MTUS2 (ENSMPUG00000004661) #26	SLC7A1 (ENSMPUG00000004649) #27	UBL3 (ENSMPUG00000004638) #28	ENSMPUG00000004620	KATNAL1 (ENSMPUG00000004610) #29	HMGB1 (ENSMPUG00000004579) #30	USPL1 (ENSMPUG00000004564) #31	ALOX5AP (ENSMPUG00000004556) #32	MEDAG (ENSMPUG00000004549) #33	TEX26 (ENSMPUG00000004539) #34	ENSMPUG00000004527
Ursidae	ANCESTRAL SPECIES	27	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Giant Panda	MODERN SPECIES	17	GPR12 (ENSAMEG00000019402)	ENSAMEG00000024690	USP12 (ENSAMEG00000001863)	RPL21 (ENSAMEG00000031074)	RASL11A (ENSAMEG00000015812)	ENSAMEG00000029656	GTF3A (ENSAMEG00000015824)	MTIF3 (ENSAMEG00000015841)	LNX2 (ENSAMEG00000015845)	ENSAMEG00000028974	GSX1 (ENSAMEG00000030161)	PDX1 (ENSAMEG00000025378)	CDX2 (ENSAMEG00000029013)	ENSAMEG00000031229	FLT3 (ENSAMEG00000002354)	PAN3 (ENSAMEG00000002349) #22	FLT1 (ENSAMEG00000002209) #23	ENSAMEG00000008961 #24	SLC46A3 (ENSAMEG00000008953) #25	MTUS2 (ENSAMEG00000008934) #26	SLC7A1 (ENSAMEG00000008899) #27	UBL3 (ENSAMEG00000008894) #28	ENSAMEG00000008885 #29	ENSAMEG00000008873 #31	ALOX5AP (ENSAMEG00000023710) #32	MEDAG (ENSAMEG00000008847) #33	TEX26 (ENSAMEG00000008839) #34	ENSAMEG00000008833	HSPH1 (ENSAMEG00000008784) #35	B3GLCT (ENSAMEG00000008757)	RXFP2 (ENSAMEG00000008702)
Ursus	ANCESTRAL SPECIES	57	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000159635 #35	ENSGT00940000155499
American black bear	MODERN SPECIES	664																ENSUAMG00000023233 #22	FLT1 (ENSUAMG00000023232) #23
Polar bear	MODERN SPECIES	177	CDK8 (ENSUMAG00000016849)	WASF3 (ENSUMAG00000016859)	GPR12 (ENSUMAG00000016877)	USP12 (ENSUMAG00000016883)	ENSUMAG00000016901	ENSUMAG00000016903	ENSUMAG00000016908	RASL11A (ENSUMAG00000016927)	GTF3A (ENSUMAG00000016941)	MTIF3 (ENSUMAG00000016954)	LNX2 (ENSUMAG00000016959)	POLR1D (ENSUMAG00000016968)	ENSUMAG00000016971	ENSUMAG00000016976	FLT3 (ENSUMAG00000016979)	PAN3 (ENSUMAG00000016986) #22	ENSUMAG00000017000	ENSUMAG00000017006 #23	POMP (ENSUMAG00000017026) #24	SLC46A3 (ENSUMAG00000017030) #25	ENSUMAG00000017046 #26	SLC7A1 (ENSUMAG00000017056) #27	UBL3 (ENSUMAG00000017145) #28	KATNAL1 (ENSUMAG00000017153) #29	ENSUMAG00000017165 #30	USPL1 (ENSUMAG00000017198) #31	ENSUMAG00000017201 #32	MEDAG (ENSUMAG00000017210) #33	TEX26 (ENSUMAG00000017213) #34	HSPH1 (ENSUMAG00000017368) #35	B3GLCT (ENSUMAG00000017840)
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00740000117041	ENSGT00940000162967	ENSGT00940000159635 #35
Afrotheria	ANCESTRAL SPECIES	89	ENSGT00940000165049	ENSGT00940000158530	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000161261	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34
Tenrec	MODERN SPECIES	597																ENSETEG00000019591 #22
Afrotheria_a	ANCESTRAL SPECIES	90	ENSGT00940000165049	ENSGT00940000158530	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00390000003643	ENSGT00940000161261	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.e.b.a.a.a #30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34
Hyrax	MODERN SPECIES	3887																PAN3 (ENSPCAG00000001143) #22
Elephant	MODERN SPECIES	294	RNF6 (ENSLAFG00000029161)	CDK8 (ENSLAFG00000006771)	WASF3 (ENSLAFG00000018395)	GPR12 (ENSLAFG00000014464)	ENSLAFG00000028761	USP12 (ENSLAFG00000007202)	ENSLAFG00000003677	RASL11A (ENSLAFG00000003673)	GTF3A (ENSLAFG00000027315)	MTIF3 (ENSLAFG00000015496)	LNX2 (ENSLAFG00000015044)	POLR1D (ENSLAFG00000032290)	ENSLAFG00000022071	CDX2 (ENSLAFG00000030146)	FLT3 (ENSLAFG00000015599)	PAN3 (ENSLAFG00000015614) #22	FLT1 (ENSLAFG00000015622) #23	POMP (ENSLAFG00000003665) #24	SLC46A3 (ENSLAFG00000009925) #25	ENSLAFG00000016168 #26	SLC7A1 (ENSLAFG00000016186) #27	UBL3 (ENSLAFG00000000781) #28	KATNAL1 (ENSLAFG00000003140) #29	HMGB1 (ENSLAFG00000000269) #30	USPL1 (ENSLAFG00000007634) #31	ALOX5AP (ENSLAFG00000018481) #32	MEDAG (ENSLAFG00000018412) #33	TEX26 (ENSLAFG00000025765) #34	UBAC2 (ENSLAFG00000007662)	GPR18 (ENSLAFG00000007667)	GPR183 (ENSLAFG00000022160)
Xenarthra	ANCESTRAL SPECIES	208			ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00550000075160	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00970000194118
Sloth	MODERN SPECIES	4232																PAN3 (ENSCHOG00000011265) #22
Armadillo	MODERN SPECIES	1567	WASF3 (ENSDNOG00000002618)	GPR12 (ENSDNOG00000017683)	ENSDNOG00000043479	RASL11A (ENSDNOG00000010166)	ENSDNOG00000041047	ENSDNOG00000037405	MTIF3 (ENSDNOG00000037641)	LNX2 (ENSDNOG00000006927)	ENSDNOG00000043676	ENSDNOG00000044869	GSX1 (ENSDNOG00000011821)	PDX1 (ENSDNOG00000003213)	CDX2 (ENSDNOG00000035260)	ENSDNOG00000046210	FLT3 (ENSDNOG00000001582)	PAN3 (ENSDNOG00000017391) #22	ENSDNOG00000031252	ENSDNOG00000036523	SLC46A3 (ENSDNOG00000000330) #25	ENSDNOG00000031980
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.f ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Opossum	MODERN SPECIES	3	CDK8 (ENSMODG00000008753)	WASF3 (ENSMODG00000008795)	ENSMODG00000008874	RPL21 (ENSMODG00000008923)	RASL11A (ENSMODG00000008941)	GTF3A (ENSMODG00000008955)	ENSMODG00000008962	ENSMODG00000050662	LNX2 (ENSMODG00000008989)	ENSMODG00000047217	GSX1 (ENSMODG00000009010)	ENSMODG00000009015	CDX2 (ENSMODG00000009021)	URAD (ENSMODG00000039216)	FLT3 (ENSMODG00000009045)	PAN3 (ENSMODG00000009065) #22	FLT1 (ENSMODG00000009128) #23	POMP (ENSMODG00000009139) #24	SLC46A3 (ENSMODG00000009152) #25	MTUS2 (ENSMODG00000009167) #26	SLC7A1 (ENSMODG00000009198) #27	ENSMODG00000009203	UBL3 (ENSMODG00000037463) #28	KATNAL1 (ENSMODG00000009220) #29	ENSMODG00000048360	ENSMODG00000009238 ##30	ENSMODG00000009262 #31	ALOX5AP (ENSMODG00000009265) #32	MEDAG (ENSMODG00000009294) #33	ENSMODG00000041498	ENSMODG00000009305
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647.u	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.f ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Tasmanian devil	MODERN SPECIES	2	CDK8 (ENSSHAG00000012149)	WASF3 (ENSSHAG00000013579)	GPR12 (ENSSHAG00000030631)	USP12 (ENSSHAG00000016123)	RPL21 (ENSSHAG00000000845)	RASL11A (ENSSHAG00000016468)	GTF3A (ENSSHAG00000016965)	ENSSHAG00000017006	LNX2 (ENSSHAG00000017242)	ENSSHAG00000025491	GSX1 (ENSSHAG00000029989)	ENSSHAG00000017812	CDX2 (ENSSHAG00000017862)	ENSSHAG00000024737	FLT3 (ENSSHAG00000017900)	PAN3 (ENSSHAG00000018065) #22	ENSSHAG00000029371	ENSSHAG00000018212 #23	POMP (ENSSHAG00000030814) #24	SLC46A3 (ENSSHAG00000018516) #25	MTUS2 (ENSSHAG00000003528) #26	SLC7A1 (ENSSHAG00000005902) #27	UBL3 (ENSSHAG00000026625) #28	KATNAL1 (ENSSHAG00000025350) #29	ENSSHAG00000014034 ##30	ENSSHAG00000014789 #31	ALOX5AP (ENSSHAG00000015184) #32	MEDAG (ENSSHAG00000027393) #33	ENSSHAG00000016069 #34	HSPH1 (ENSSHAG00000016697) #35	ENSSHAG00000028294
Diprotodontia	ANCESTRAL SPECIES	11	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647.u	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.f ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b	ENSGT00940000161208	ENSGT00940000155647.u	ENSGT00390000014424	ENSGT00940000158381	ENSGT00390000003643	ENSGT00940000154361.A	ENSGT00940000162542	ENSGT00940000161261	ENSGT00390000002395	ENSGT00940000160575	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #26	ENSGT00940000155349 #27	ENSGT00390000004952.b #28	ENSGT00940000156630 #29	ENSGT00950000183120.f ##30	ENSGT00390000002316 #31	ENSGT00940000158706 #32	ENSGT00390000018451 #33	ENSGT00390000009484 #34	ENSGT00940000162967	ENSGT00940000159635 #35
koala	MODERN SPECIES	66	CDK8 (ENSPCIG00000017352)	WASF3 (ENSPCIG00000037264)	GPR12 (ENSPCIG00000023230)	USP12 (ENSPCIG00000022249)	RPL21 (ENSPCIG00000022238)	RASL11A (ENSPCIG00000031842)	GTF3A (ENSPCIG00000022226)	MTIF3 (ENSPCIG00000022222)	LNX2 (ENSPCIG00000022213)	ENSPCIG00000022208	GSX1 (ENSPCIG00000022205)	PDX1 (ENSPCIG00000022204)	CDX2 (ENSPCIG00000022200)	ENSPCIG00000022197	FLT3 (ENSPCIG00000022190)	PAN3 (ENSPCIG00000022181) #22	ENSPCIG00000022165	ENSPCIG00000036587 #23	ENSPCIG00000032952	ENSPCIG00000022156 #24	SLC46A3 (ENSPCIG00000022153) #25	MTUS2 (ENSPCIG00000003294) #26	SLC7A1 (ENSPCIG00000003318) #27	UBL3 (ENSPCIG00000003332) #28	KATNAL1 (ENSPCIG00000021438) #29	ENSPCIG00000021432 ##30	USPL1 (ENSPCIG00000019844) #31	ALOX5AP (ENSPCIG00000019847) #32	MEDAG (ENSPCIG00000012205) #33	ENSPCIG00000012206 #34	ENSPCIG00000026818
Common wonbat	MODERN SPECIES	1049	CDK8 (ENSVURG00010020617)	WASF3 (ENSVURG00010020608)	ENSVURG00010020587	ENSVURG00010020571	RASL11A (ENSVURG00010020566)	ENSVURG00010020554	ENSVURG00010020547	LNX2 (ENSVURG00010020536)	ENSVURG00010020531	GSX1 (ENSVURG00010020523)	ENSVURG00010020522	PDX1 (ENSVURG00010020518)	CDX2 (ENSVURG00010020516)	ENSVURG00010020509	FLT3 (ENSVURG00010020490)	PAN3 (ENSVURG00010020471) #22	FLT1 (ENSVURG00010020423) #23	POMP (ENSVURG00010020395) #24	SLC46A3 (ENSVURG00010020388) #25	ENSVURG00010020380	ENSVURG00010020337 #26	SLC7A1 (ENSVURG00010020318) #27	UBL3 (ENSVURG00010020310) #28	ENSVURG00010020303	KATNAL1 (ENSVURG00010020293) #29	ENSVURG00010020283 ##30	ENSVURG00010020274 #31	ALOX5AP (ENSVURG00010020266) #32	MEDAG (ENSVURG00010020258) #33	ENSVURG00010020246 #34	ENSVURG00010020232
Wallaby	MODERN SPECIES	1213																ENSMEUG00000011366 #22
Platypus	MODERN SPECIES	12	CDK8 (ENSOANG00000009050)	WASF3 (ENSOANG00000009051)	GPR12 (ENSOANG00000009052)	USP12 (ENSOANG00000009053)	ENSOANG00000009054	RASL11A (ENSOANG00000009056)	GTF3A (ENSOANG00000038706)	ENSOANG00000009057	LNX2 (ENSOANG00000009060)	ENSOANG00000051147	GSX1 (ENSOANG00000040381)	ENSOANG00000009064	ENSOANG00000043986	ENSOANG00000009066	ENSOANG00000045061	PAN3 (ENSOANG00000009070) #22	FLT1 (ENSOANG00000009071) #23	POMP (ENSOANG00000050524) #24	SLC46A3 (ENSOANG00000015257) #25	ENSOANG00000048575 #26	SLC7A1 (ENSOANG00000041862) #27	UBL3 (ENSOANG00000039422) #28	KATNAL1 (ENSOANG00000014718) #29	ENSOANG00000014719 #30	ENSOANG00000048910	ENSOANG00000014720 #31	ALOX5AP (ENSOANG00000040345) #32	MEDAG (ENSOANG00000039210) #33	TEX26 (ENSOANG00000046294) #34	ENSOANG00000015473	HSPH1 (ENSOANG00000015474) #35