Eutheria	ANCESTRAL SPECIES	17	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734 #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Primates	ANCESTRAL SPECIES	29	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499
Haplorrhini	ANCESTRAL SPECIES	43	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00950000183120.e.b.a.a.b.b.b.b ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499
Catarrhini	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a ##25	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00910000148031 #32	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a ##25	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00910000148031 #32	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00940000155828.o.a #35	ENSGT00940000154686.g.b
Hominidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00940000153889.f #25	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00910000148031 #32	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00940000155828.o.a #35	ENSGT00950000183120.e.b.a.a.b.b.b.b ##37	ENSGT00390000002316
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00940000153889.f #25	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00910000148031 #32	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00940000155828.o.a #35	ENSGT00950000183203.d.h	ENSGT00940000153654.ub #36
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00940000153889.f #25	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00910000148031 #32	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00940000155828.o.a #35	ENSGT00950000183203.d.h	ENSGT00940000153654.ub #36
Pan	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00390000015470.z.b #17	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00940000153889.f #25	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00930000151026.f #28	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00910000148031 #32	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00940000155828.o.a #35	ENSGT00950000183203.d.h
Chimpanzee	MODERN SPECIES	4	GPR12 (ENSPTRG00000046989) #7	USP12 (ENSPTRG00000005727) #8	RPL21 (ENSPTRG00000005728) #9	RASL11A (ENSPTRG00000005729) #10	GTF3A (ENSPTRG00000005730) #11	MTIF3 (ENSPTRG00000005732) #12	LNX2 (ENSPTRG00000005733) #13	POLR1D (ENSPTRG00000005734) #14	GSX1 (ENSPTRG00000005735) #15	PDX1 (ENSPTRG00000005736) #16	ENSPTRG00000005737 #17	CDX2 (ENSPTRG00000043330) #18	URAD (ENSPTRG00000005739) #19	FLT3 (ENSPTRG00000005740) #20	ENSPTRG00000046829 #21	PAN3 (ENSPTRG00000005742) #22	FLT1 (ENSPTRG00000005743) #23	ENSPTRG00000045890 #24	ENSPTRG00000046663 #25	POMP (ENSPTRG00000005745) #26	SLC46A3 (ENSPTRG00000005746) #27	ENSPTRG00000045489 #28	MTUS2 (ENSPTRG00000005747) #29	ENSPTRG00000046056 #30	SLC7A1 (ENSPTRG00000005750) #31	ENSPTRG00000049804 #32	UBL3 (ENSPTRG00000005751) #33	KATNAL1 (ENSPTRG00000005753) #34	ENSPTRG00000044243 #35	UBE2L5 (ENSPTRG00000050842) #36	ENSPTRG00000048008 #37
Bonobo	MODERN SPECIES	4	CDK8 (ENSPPAG00000035126)	WASF3 (ENSPPAG00000035699)	GPR12 (ENSPPAG00000007707) #7	ENSPPAG00000007246 #8	ENSPPAG00000042860 #9	RASL11A (ENSPPAG00000027996) #10	GTF3A (ENSPPAG00000034725) #11	MTIF3 (ENSPPAG00000027304) #12	LNX2 (ENSPPAG00000027444) #13	ENSPPAG00000028138 #14	GSX1 (ENSPPAG00000032556) #15	ENSPPAG00000032720 #16	ENSPPAG00000032440 #17	CDX2 (ENSPPAG00000032963) #18	FLT3 (ENSPPAG00000015701) #20	PAN3 (ENSPPAG00000027826) #22	ENSPPAG00000030264	ENSPPAG00000033250 #23	ENSPPAG00000027416 #24	POMP (ENSPPAG00000036286) #26	SLC46A3 (ENSPPAG00000035795) #27	ENSPPAG00000027903 #28	MTUS2 (ENSPPAG00000032687) #29	ENSPPAG00000034238 #30	SLC7A1 (ENSPPAG00000037016) #31	ENSPPAG00000015303 #32	UBL3 (ENSPPAG00000027496) #33	KATNAL1 (ENSPPAG00000033530) #34	ENSPPAG00000037440 #35	UBE2L5 (ENSPPAG00000032233) #36	ENSPPAG00000030148 ##37
Human	MODERN SPECIES	4	CDK8 (ENSG00000132964)	WASF3 (ENSG00000132970)	GPR12 (ENSG00000132975) #7	USP12 (ENSG00000152484) ##8	RPL21 (ENSG00000122026) ##9	RASL11A (ENSG00000122035) #10	GTF3A (ENSG00000122034) #11	MTIF3 (ENSG00000122033) #12	LNX2 (ENSG00000139517) #13	POLR1D (ENSG00000186184) ##14	GSX1 (ENSG00000169840) #15	PDX1 (ENSG00000139515) #16	CDX2 (ENSG00000165556) #18	URAD (ENSG00000183463) #19	FLT3 (ENSG00000122025) #20	PAN3 (ENSG00000152520) #22	FLT1 (ENSG00000102755) #23	POMP (ENSG00000132963) #26	SLC46A3 (ENSG00000139508) #27	MTUS2 (ENSG00000132938) #29	SLC7A1 (ENSG00000139514) #31	UBL3 (ENSG00000122042) #33	KATNAL1 (ENSG00000102781) #34	UBE2L5 (ENSG00000236444) #36	HMGB1 (ENSG00000189403) #37	USPL1 (ENSG00000132952)	ALOX5AP (ENSG00000132965)	MEDAG (ENSG00000102802)	TEX26 (ENSG00000175664)	HSPH1 (ENSG00000120694)	B3GLCT (ENSG00000187676)
Gorilla	MODERN SPECIES	4	CDK8 (ENSGGOG00000006569)	WASF3 (ENSGGOG00000012518)	GPR12 (ENSGGOG00000000849) #7	ENSGGOG00000011358 ##8	ENSGGOG00000003002 #9	RASL11A (ENSGGOG00000008785) #10	GTF3A (ENSGGOG00000008407) #11	MTIF3 (ENSGGOG00000041079) #12	LNX2 (ENSGGOG00000016167) #13	POLR1D (ENSGGOG00000004235) ##14	GSX1 (ENSGGOG00000005011) #15	PDX1 (ENSGGOG00000002569) #16	CDX2 (ENSGGOG00000005487) #18	URAD (ENSGGOG00000005489) #19	FLT3 (ENSGGOG00000000882) #20	PAN3 (ENSGGOG00000016079) #22	FLT1 (ENSGGOG00000008750) #23	ENSGGOG00000036812 #24	ENSGGOG00000036780 #25	POMP (ENSGGOG00000015316) #26	SLC46A3 (ENSGGOG00000014254) #27	ENSGGOG00000042729 #28	UBL3 (ENSGGOG00000023146) #33	KATNAL1 (ENSGGOG00000026875) #34	ENSGGOG00000024714 #35	UBE2L5 (ENSGGOG00000006857) #36	HMGB1 (ENSGGOG00000026764) #37	USPL1 (ENSGGOG00000004673)	ENSGGOG00000013859	MEDAG (ENSGGOG00000009867)	TEX26 (ENSGGOG00000016812)
Orangutan	MODERN SPECIES	4	GPR12 (ENSPPYG00000005231) #7	USP12 (ENSPPYG00000005232) ##8	RPL21 (ENSPPYG00000005233) ##9	RASL11A (ENSPPYG00000005234) #10	GTF3A (ENSPPYG00000005235) #11	MTIF3 (ENSPPYG00000005236) #12	LNX2 (ENSPPYG00000005237) #13	ENSPPYG00000005238	GSX1 (ENSPPYG00000005239) #15	PDX1 (ENSPPYG00000005240) #16	ENSPPYG00000005241 ##17	CDX2 (ENSPPYG00000005242) #18	URAD (ENSPPYG00000005243) #19	FLT3 (ENSPPYG00000005244) #20	ENSPPYG00000040072	PAN3 (ENSPPYG00000005245) #22	FLT1 (ENSPPYG00000005246) #23	ENSPPYG00000034417 #24	ENSPPYG00000038952 #25	POMP (ENSPPYG00000005247) #26	SLC46A3 (ENSPPYG00000005248) #27	MTUS2 (ENSPPYG00000005249) #29	SLC7A1 (ENSPPYG00000005250) #31	ENSPPYG00000034870 #32	UBL3 (ENSPPYG00000037129) #33	KATNAL1 (ENSPPYG00000005253) #34	ENSPPYG00000031030 #35	UBE2L5 (ENSPPYG00000005254) #36	ENSPPYG00000030447 ##37	USPL1 (ENSPPYG00000005543)	ENSPPYG00000005255
Gibbon	MODERN SPECIES	24	ATP2B4 (ENSNLEG00000018117)	ENSNLEG00000000323 #8	ENSNLEG00000000327 ##9	RASL11A (ENSNLEG00000000329) #10	GTF3A (ENSNLEG00000000331) #11	MTIF3 (ENSNLEG00000000343) #12	LNX2 (ENSNLEG00000000345) #13	ENSNLEG00000000358 #14	GSX1 (ENSNLEG00000000360) #15	PDX1 (ENSNLEG00000000362) #16	CDX2 (ENSNLEG00000000365) #18	URAD (ENSNLEG00000000369) #19	FLT3 (ENSNLEG00000000372) #20	ENSNLEG00000035718	ENSNLEG00000029210	PAN3 (ENSNLEG00000000388) #22	FLT1 (ENSNLEG00000000456) #23	ENSNLEG00000030098 #24	ENSNLEG00000033802	ENSNLEG00000000571 ##25	POMP (ENSNLEG00000000572) #26	SLC46A3 (ENSNLEG00000000599) #27	ENSNLEG00000000618 #29	ENSNLEG00000033304 #30	ENSNLEG00000035615 #29	SLC7A1 (ENSNLEG00000000622) #31	UBL3 (ENSNLEG00000000660) #33	KATNAL1 (ENSNLEG00000000679) #34	ENSNLEG00000000717	UBE2L5 (ENSNLEG00000018657) #36	ENSNLEG00000000720 ##37
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a ##25	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00910000148031 #32	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000155828.o.a #35	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00910000147903	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000155828.o.a #35	ENSGT00940000156630 #34	ENSGT00940000154686.g.b	ENSGT00390000002316
Macaca	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00910000147903	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00940000155828.o.a #35	ENSGT00950000183120.e.b.a.b ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484
Pig-tailed macaque	MODERN SPECIES	165	GPR12 (ENSMNEG00000010974) #7	ENSMNEG00000039505 #8	ENSMNEG00000034115 #9	RASL11A (ENSMNEG00000033345) #10	GTF3A (ENSMNEG00000043473) #11	MTIF3 (ENSMNEG00000032443) #12	LNX2 (ENSMNEG00000040860) #13	ENSMNEG00000034652	ENSMNEG00000008630 #14	GSX1 (ENSMNEG00000032682) #15	PDX1 (ENSMNEG00000032095) #16	CDX2 (ENSMNEG00000043440) #18	URAD (ENSMNEG00000045421) #19	FLT3 (ENSMNEG00000032442) #20	ENSMNEG00000043801	PAN3 (ENSMNEG00000032817) #22	FLT1 (ENSMNEG00000032149) #23	ENSMNEG00000028177	ENSMNEG00000043904	POMP (ENSMNEG00000031404) #26	SLC46A3 (ENSMNEG00000038996) #27	MTUS2 (ENSMNEG00000039238) #29	SLC7A1 (ENSMNEG00000044453) #31	SLC5A7 (ENSMNEG00000039266)	ENSMNEG00000022050	ST6GAL2 (ENSMNEG00000036708)	ENSMNEG00000019179	ENSMNEG00000044732	UXS1 (ENSMNEG00000040004)	ECRG4 (ENSMNEG00000043594)	NCK2 (ENSMNEG00000039028)
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.i.a ##8	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.a.b.a	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT01100000263493.a.b.a.a.b.a.b.b	ENSGT00940000158381 #13	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00940000155828.o.a #35	ENSGT00950000183120.e.b.a.b ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635
Rhesus	MODERN SPECIES	8	ENSMMUG00000050226	USP12 (ENSMMUG00000021425) ##8	ENSMMUG00000054994	ENSMMUG00000058755 ##9	RASL11A (ENSMMUG00000049650) #10	GTF3A (ENSMMUG00000009029) #11	MTIF3 (ENSMMUG00000009030) #12	ENSMMUG00000059867	LNX2 (ENSMMUG00000058786) #13	POLR1D (ENSMMUG00000020386)	GSX1 (ENSMMUG00000004507) #15	PDX1 (ENSMMUG00000064615) #16	CDX2 (ENSMMUG00000052070) #18	URAD (ENSMMUG00000016138) #19	FLT3 (ENSMMUG00000016139) #20	PAN3 (ENSMMUG00000022522) #22	FLT1 (ENSMMUG00000021538) #23	ENSMMUG00000063649	POMP (ENSMMUG00000058998) #26	SLC46A3 (ENSMMUG00000013721) #27	MTUS2 (ENSMMUG00000008658) #29	SLC7A1 (ENSMMUG00000008661) #31	UBL3 (ENSMMUG00000003771) #33	KATNAL1 (ENSMMUG00000004922) #34	UBE2L5 (ENSMMUG00000008940) #36	ENSMMUG00000058466	HMGB1 (ENSMMUG00000046615) #37	ENSMMUG00000052770	USPL1 (ENSMMUG00000007597)	ALOX5AP (ENSMMUG00000005572)	ENSMMUG00000053993
Crab-eating macaque	MODERN SPECIES	8	ENSMFAG00000062305	ENSMFAG00000053340 #9	RASL11A (ENSMFAG00000044628) #10	GTF3A (ENSMFAG00000044837) #11	MTIF3 (ENSMFAG00000045045) #12	ENSMFAG00000050995	LNX2 (ENSMFAG00000045245) #13	ENSMFAG00000045264	GSX1 (ENSMFAG00000037158) #15	PDX1 (ENSMFAG00000063371) #16	CDX2 (ENSMFAG00000051158) #18	URAD (ENSMFAG00000043442) #19	FLT3 (ENSMFAG00000044854) #20	ENSMFAG00000052223	ENSMFAG00000063510	PAN3 (ENSMFAG00000025538) #22	FLT1 (ENSMFAG00000035718) #23	ENSMFAG00000039222	POMP (ENSMFAG00000025369) #26	SLC46A3 (ENSMFAG00000030072) #27	MTUS2 (ENSMFAG00000032200) #29	SLC7A1 (ENSMFAG00000043457) #31	UBL3 (ENSMFAG00000044955) #33	KATNAL1 (ENSMFAG00000053013) #34	ENSMFAG00000053527 #35	UBE2L5 (ENSMFAG00000045697) #36	ENSMFAG00000030905 ##37	USPL1 (ENSMFAG00000032370)	ALOX5AP (ENSMFAG00000032586)	MEDAG (ENSMFAG00000035649)	TEX26 (ENSMFAG00000035671)
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00910000147903	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000155828.o.a #35	ENSGT00940000156630 #34	ENSGT00940000154686.g.b	ENSGT00390000002316
Olive baboon	MODERN SPECIES	6	GPR12 (ENSPANG00000003061) #7	USP12 (ENSPANG00000011533) ##8	ENSPANG00000011984 ##9	RASL11A (ENSPANG00000044196) #10	GTF3A (ENSPANG00000012593) #11	MTIF3 (ENSPANG00000005047) #12	LNX2 (ENSPANG00000012983) #13	ENSPANG00000020259 #14	ENSPANG00000038544	GSX1 (ENSPANG00000017129) #15	ENSPANG00000047094	PDX1 (ENSPANG00000012683) #16	CDX2 (ENSPANG00000050183) #18	URAD (ENSPANG00000014018) #19	FLT3 (ENSPANG00000009315) #20	PAN3 (ENSPANG00000001988) #22	FLT1 (ENSPANG00000009892) #23	ENSPANG00000044787	POMP (ENSPANG00000046275) #26	SLC46A3 (ENSPANG00000020218) #27	MTUS2 (ENSPANG00000013682) #29	SLC7A1 (ENSPANG00000012138) #31	UBL3 (ENSPANG00000008471) #33	KATNAL1 (ENSPANG00000023364) #34	UBE2L5 (ENSPANG00000043221) #36	HMGB1 (ENSPANG00000007200) ##37	USPL1 (ENSPANG00000005488)	ALOX5AP (ENSPANG00000020217)	MEDAG (ENSPANG00000021857)	TEX26 (ENSPANG00000012755)	HSPH1 (ENSPANG00000012232)
Cercopithecinae_d	ANCESTRAL SPECIES	93	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00910000147903	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00910000147174 #30	ENSGT00940000155349 #31	ENSGT00910000148031 #32
Sooty mangabey	MODERN SPECIES	255	ENSCATG00000018180	ENSCATG00000038452 #8	ENSCATG00000032591 ##9	RASL11A (ENSCATG00000033838) #10	GTF3A (ENSCATG00000032361) #11	MTIF3 (ENSCATG00000007775) #12	LNX2 (ENSCATG00000035354) #13	ENSCATG00000030710 #14	ENSCATG00000002488	GSX1 (ENSCATG00000028004) #15	PDX1 (ENSCATG00000035793) #16	CDX2 (ENSCATG00000007363) #18	URAD (ENSCATG00000007826) #19	FLT3 (ENSCATG00000014529) #20	ENSCATG00000032726	PAN3 (ENSCATG00000030893) #22	FLT1 (ENSCATG00000034541) #23	ENSCATG00000024438 #24	ENSCATG00000028829	ENSCATG00000033485	POMP (ENSCATG00000037462) #26	SLC46A3 (ENSCATG00000021488) #27	MTUS2 (ENSCATG00000041831) #29	ENSCATG00000037549 #30	SLC7A1 (ENSCATG00000025899) #31	ENSCATG00000034802
Drill	MODERN SPECIES	1324	RNF6 (ENSMLEG00000038569)	CDK8 (ENSMLEG00000040071)	WASF3 (ENSMLEG00000040168)	GPR12 (ENSMLEG00000002545) #7	ENSMLEG00000033598 #8	ENSMLEG00000024280 ##9	RASL11A (ENSMLEG00000036089) #10	GTF3A (ENSMLEG00000039703) #11	MTIF3 (ENSMLEG00000039110) #12	LNX2 (ENSMLEG00000039062) #13	ENSMLEG00000041048 #14	ENSMLEG00000041805	PDX1 (ENSMLEG00000032316) #16	CDX2 (ENSMLEG00000037430) #18	FLT3 (ENSMLEG00000037398) #20	PAN3 (ENSMLEG00000008619) #22	ENSMLEG00000003098	FLT1 (ENSMLEG00000034284) #23	ENSMLEG00000038076 #24	ENSMLEG00000036390	ENSMLEG00000042438	POMP (ENSMLEG00000039576) #26	SLC46A3 (ENSMLEG00000044293) #27	ENSMLEG00000006158 ##29
Vervet Monkey	MODERN SPECIES	22	RNF6 (ENSCSAG00000017991)	CDK8 (ENSCSAG00000017989)	WASF3 (ENSCSAG00000017987)	GPR12 (ENSCSAG00000018592) #7	ENSCSAG00000017986 ##8	RASL11A (ENSCSAG00000017985) #10	GTF3A (ENSCSAG00000017983) #11	MTIF3 (ENSCSAG00000017982) #12	LNX2 (ENSCSAG00000017981) #13	ENSCSAG00000017980	GSX1 (ENSCSAG00000017979) #15	PDX1 (ENSCSAG00000017977) #16	CDX2 (ENSCSAG00000017976) #18	URAD (ENSCSAG00000017975) #19	FLT3 (ENSCSAG00000017973) #20	PAN3 (ENSCSAG00000017971) #22	FLT1 (ENSCSAG00000017969) #23	POMP (ENSCSAG00000017967) #26	SLC46A3 (ENSCSAG00000017966) #27	MTUS2 (ENSCSAG00000017964) #29	SLC7A1 (ENSCSAG00000017961) #31	UBL3 (ENSCSAG00000017959) #33	KATNAL1 (ENSCSAG00000017958) #34	USPL1 (ENSCSAG00000017953)	ALOX5AP (ENSCSAG00000017950)	MEDAG (ENSCSAG00000017948)	TEX26 (ENSCSAG00000017946)	HSPH1 (ENSCSAG00000017943)	B3GLCT (ENSCSAG00000017941)	RXFP2 (ENSCSAG00000017936)	FRY (ENSCSAG00000017926)
Rhinopithecus	ANCESTRAL SPECIES	56	ENSGT00940000165378.d	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160.x #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000146937 #24	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a ##25	ENSGT00390000010734.j.i #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.A.b ##29	ENSGT00910000147174 #30	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00910000148031 #32	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00940000153654 #36	ENSGT00390000002575
Black snub-nosed monkey	MODERN SPECIES	1391	CDK8 (ENSRBIG00000040781)	WASF3 (ENSRBIG00000033396)	GPR12 (ENSRBIG00000001744) #7	ENSRBIG00000041212 #8	ENSRBIG00000036802 #9	RASL11A (ENSRBIG00000043749) #10	GTF3A (ENSRBIG00000044964) #11	MTIF3 (ENSRBIG00000027271) #12	LNX2 (ENSRBIG00000028850) #13	ENSRBIG00000036378 #14	GSX1 (ENSRBIG00000032182) #15	PDX1 (ENSRBIG00000039353) #16	CDX2 (ENSRBIG00000038667) #18	ENSRBIG00000030643	FLT3 (ENSRBIG00000042399) #20	PAN3 (ENSRBIG00000036981) #22	FLT1 (ENSRBIG00000036952) #23	ENSRBIG00000034378 #24	ENSRBIG00000017410	ENSRBIG00000040184 ##25	ENSRBIG00000028141 #26	SLC46A3 (ENSRBIG00000039296) #27	ENSRBIG00000043698 #30	MTUS2 (ENSRBIG00000042717) #29	SLC7A1 (ENSRBIG00000030519) #31	ENSRBIG00000024318 #32	UBL3 (ENSRBIG00000032584) #33
Golden snub-nosed monkey	MODERN SPECIES	603										GSX1 (ENSRROG00000032356) #15	PDX1 (ENSRROG00000038796) #16	CDX2 (ENSRROG00000036416) #18	URAD (ENSRROG00000032393) #19	FLT3 (ENSRROG00000032511) #20	ENSRROG00000038089	PAN3 (ENSRROG00000044835) #22	FLT1 (ENSRROG00000044082) #23	ENSRROG00000044673 #24	ENSRROG00000036924	ENSRROG00000028953 ##25	ENSRROG00000035051 #26	SLC46A3 (ENSRROG00000013197) #27	ENSRROG00000029261 ##29
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.b.a.a.a ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.b.b ##37	ENSGT00950000183120.e.b.a.a.b.b.b.b ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.b.a.a.a ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.b.b ##37	ENSGT00950000183120.e.b.a.a.b.b.b.b ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635
Marmoset	MODERN SPECIES	17	ENSCJAG00000073678	ENSCJAG00000069611	ENSCJAG00000044684 ##9	RASL11A (ENSCJAG00000019369) #10	GTF3A (ENSCJAG00000077697) #11	MTIF3 (ENSCJAG00000019378) #12	LNX2 (ENSCJAG00000019379) #13	POLR1D (ENSCJAG00000044669) #14	GSX1 (ENSCJAG00000080181) #15	PDX1 (ENSCJAG00000078316) #16	ENSCJAG00000076582	CDX2 (ENSCJAG00000019398) #18	ENSCJAG00000019404	FLT3 (ENSCJAG00000019405) #20	ENSCJAG00000073991	PAN3 (ENSCJAG00000019421) #22	FLT1 (ENSCJAG00000019447) #23	ENSCJAG00000080582	POMP (ENSCJAG00000019473) #26	SLC46A3 (ENSCJAG00000019491) #27	MTUS2 (ENSCJAG00000019500) #29	ENSCJAG00000072801	SLC7A1 (ENSCJAG00000019515) #31	ENSCJAG00000058143	UBL3 (ENSCJAG00000019517) #33	KATNAL1 (ENSCJAG00000021612) #34	ENSCJAG00000079039 #36	ENSCJAG00000020439 ##37	USPL1 (ENSCJAG00000021616)	ALOX5AP (ENSCJAG00000021617)	MEDAG (ENSCJAG00000018674)
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h.j #8	ENSGT00950000182922.a.a.a.b.b.a.a.a ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00390000011417.k.d	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.b.b ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635
Capuchin	MODERN SPECIES	103	ENSCCAG00000021328	USP12 (ENSCCAG00000023369) #8	ENSCCAG00000031101 ##9	RASL11A (ENSCCAG00000021842) #10	GTF3A (ENSCCAG00000029730) #11	MTIF3 (ENSCCAG00000036048) #12	ENSCCAG00000026568	LNX2 (ENSCCAG00000020368) #13	ENSCCAG00000021349 #14	GSX1 (ENSCCAG00000025929) #15	PDX1 (ENSCCAG00000036295) #16	CDX2 (ENSCCAG00000025801) #18	ENSCCAG00000029430	FLT3 (ENSCCAG00000022587) #20	ENSCCAG00000027785	PAN3 (ENSCCAG00000021218) #22	ENSCCAG00000000468	FLT1 (ENSCCAG00000035784) #23	POMP (ENSCCAG00000027871) #26	SLC46A3 (ENSCCAG00000025858) #27	MTUS2 (ENSCCAG00000025313) #29	SLC7A1 (ENSCCAG00000000822) #31	CIAPIN1 (ENSCCAG00000020425)	UBL3 (ENSCCAG00000021780) #33	KATNA1 (ENSCCAG00000029984) #34	ENSCCAG00000028011 ##37	ENSCCAG00000032047	REPS2 (ENSCCAG00000024409)	ENSCCAG00000022504	TXLNG (ENSCCAG00000030583)	SYAP1 (ENSCCAG00000034423)
Bolivian squirrel monkey	MODERN SPECIES	42	ENSSBOG00000031441 ##9	RASL11A (ENSSBOG00000025363) #10	GTF3A (ENSSBOG00000002098) #11	MTIF3 (ENSSBOG00000030469) #12	LNX2 (ENSSBOG00000025148) #13	ENSSBOG00000014497	ENSSBOG00000028482 #14	ENSSBOG00000015416	GSX1 (ENSSBOG00000026103) #15	PDX1 (ENSSBOG00000031436) #16	CDX2 (ENSSBOG00000031573) #18	ENSSBOG00000027743	ENSSBOG00000020835	FLT3 (ENSSBOG00000026666) #20	ENSSBOG00000032374	PAN3 (ENSSBOG00000020298) #22	ENSSBOG00000020899	FLT1 (ENSSBOG00000015766) #23	POMP (ENSSBOG00000032229) #26	SLC46A3 (ENSSBOG00000025396) #27	ENSSBOG00000019071	MTUS2 (ENSSBOG00000026505) #29	SLC7A1 (ENSSBOG00000020061) #31	ENSSBOG00000028866	UBL3 (ENSSBOG00000009211) #33	ENSSBOG00000020013	KATNAL1 (ENSSBOG00000009792) #34	ENSSBOG00000023208 ##37	ENSSBOG00000024496	USPL1 (ENSSBOG00000028053)	ALOX5AP (ENSSBOG00000035529)
Mas night monkey	MODERN SPECIES	331	NUP58 (ENSANAG00000023073)	ENSANAG00000032118 #8	ENSANAG00000023031 ##9	RASL11A (ENSANAG00000027999) #10	GTF3A (ENSANAG00000019293) #11	MTIF3 (ENSANAG00000031630) #12	ENSANAG00000024188	LNX2 (ENSANAG00000028866) #13	POLR1D (ENSANAG00000024486) #14	GSX1 (ENSANAG00000020508) #15	PDX1 (ENSANAG00000033534) #16	CDX2 (ENSANAG00000030392) #18	URAD (ENSANAG00000029018) #19	FLT3 (ENSANAG00000025242) #20	ENSANAG00000034890	PAN3 (ENSANAG00000028419) #22	ENSANAG00000028102	FLT1 (ENSANAG00000027521) #23	ENSANAG00000035277 #26
Tarsier	MODERN SPECIES	5212														ENSTSYG00000029265 #18	FLT3 (ENSTSYG00000011237) #20	PAN3 (ENSTSYG00000011845) #22	ENSTSYG00000034627	CD2AP (ENSTSYG00000002464)	ENSTSYG00000002476	ADGRF4 (ENSTSYG00000002483)	OPN5 (ENSTSYG00000005962)
Strepsirrhini	ANCESTRAL SPECIES	41	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.b.a.a.a ##9	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b ##37	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00940000153259.a.a.b.d	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.b.a.a.a ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Lemuriformes_a	ANCESTRAL SPECIES	41																ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Greater bamboo lemur	MODERN SPECIES	560																PAN3 (ENSPSMG00000018171) #22	FLT1 (ENSPSMG00000018075) #23	ENSPSMG00000017984 #26	SLC46A3 (ENSPSMG00000017980) #27	ENSPSMG00000017966 #29	SLC7A1 (ENSPSMG00000017930) #31	UBL3 (ENSPSMG00000017878) #33	KATNAL1 (ENSPSMG00000017845) #34	HMGB1 (ENSPSMG00000017832) #37	USPL1 (ENSPSMG00000017819)	ALOX5AP (ENSPSMG00000017803)	MEDAG (ENSPSMG00000017788)	TEX26 (ENSPSMG00000017783)	HSPH1 (ENSPSMG00000017725)
Coquerels sifaka	MODERN SPECIES	251																PAN3 (ENSPCOG00000000176) #22	FLT1 (ENSPCOG00000020203) #23	ENSPCOG00000024553 #26	SLC46A3 (ENSPCOG00000023509) #27	MTUS2 (ENSPCOG00000022249) #29	SLC7A1 (ENSPCOG00000025154) #31	UBL3 (ENSPCOG00000027179) #33	KATNAL1 (ENSPCOG00000022614) #34	ENSPCOG00000013493 ##37	USPL1 (ENSPCOG00000021502)	ALOX5AP (ENSPCOG00000016712)	MEDAG (ENSPCOG00000020360)	TEX26 (ENSPCOG00000022109)	ENSPCOG00000027960	B3GLCT (ENSPCOG00000004609)	RXFP2 (ENSPCOG00000011955)
Mouse lemur	MODERN SPECIES	4	SACS (ENSMICG00000034895)	SGCG (ENSMICG00000038162)	ENSMICG00000028275	ENSMICG00000006269 #8	RASL11A (ENSMICG00000029724) #10	GTF3A (ENSMICG00000014763) #11	MTIF3 (ENSMICG00000014777) #12	LNX2 (ENSMICG00000016873) #13	ENSMICG00000016883 #14	GSX1 (ENSMICG00000044124) #15	PDX1 (ENSMICG00000043487) #16	CDX2 (ENSMICG00000031345) #18	ENSMICG00000032881	FLT3 (ENSMICG00000016201) #20	ENSMICG00000027752	PAN3 (ENSMICG00000016237) #22	FLT1 (ENSMICG00000016251) #23	POMP (ENSMICG00000032068) #26	SLC46A3 (ENSMICG00000016295) #27	ENSMICG00000016299 #29	ENSMICG00000032922 #29	SLC7A1 (ENSMICG00000016312) #31	UBL3 (ENSMICG00000033508) #33	KATNAL1 (ENSMICG00000004250) #34	ENSMICG00000007144 ##37	USPL1 (ENSMICG00000045622)	ALOX5AP (ENSMICG00000001953)	MEDAG (ENSMICG00000011156)	TEX26 (ENSMICG00000008723)	HSPH1 (ENSMICG00000011892)	B3GLCT (ENSMICG00000011910)
Bushbaby	MODERN SPECIES	235	GPR12 (ENSOGAG00000006144) #7	USP12 (ENSOGAG00000030639) #8	ENSOGAG00000030191	ENSOGAG00000008181 ##9	RASL11A (ENSOGAG00000008177) #10	GTF3A (ENSOGAG00000014589) #11	MTIF3 (ENSOGAG00000014597) #12	LNX2 (ENSOGAG00000014599) #13	POLR1D (ENSOGAG00000014601) #14	GSX1 (ENSOGAG00000011242) #15	PDX1 (ENSOGAG00000016688) #16	CDX2 (ENSOGAG00000026117) #18	ENSOGAG00000016692	FLT3 (ENSOGAG00000016694) #20	ENSOGAG00000031357	PAN3 (ENSOGAG00000014604) #22	FLT1 (ENSOGAG00000014611) #23	POMP (ENSOGAG00000006044) #26	SLC46A3 (ENSOGAG00000006042) #27	MTUS2 (ENSOGAG00000010807) #29	SLC7A1 (ENSOGAG00000010813) #31	UBL3 (ENSOGAG00000004035) #33	KATNAL1 (ENSOGAG00000011308) #34	ENSOGAG00000003205 ##37	ENSOGAG00000030054	ENSOGAG00000026314	USPL1 (ENSOGAG00000015490)	ALOX5AP (ENSOGAG00000015495)	MEDAG (ENSOGAG00000034882)	TEX26 (ENSOGAG00000006834)	HSPH1 (ENSOGAG00000009898)
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Glires	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Rodentia	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647.c #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647.c #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647.c #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Degu	MODERN SPECIES	79	GPR12 (ENSODEG00000006388) #7	USP12 (ENSODEG00000006744) #8	ENSODEG00000005022 ##9	RASL11A (ENSODEG00000005775) #10	GTF3A (ENSODEG00000006725) #11	MTIF3 (ENSODEG00000006818) #12	LNX2 (ENSODEG00000006222) #13	ENSODEG00000005294 #14	ENSODEG00000006454	GSX1 (ENSODEG00000005135) #15	ENSODEG00000019134	PDX1 (ENSODEG00000005235) #16	CDX2 (ENSODEG00000007340) #18	ENSODEG00000007620	FLT3 (ENSODEG00000007884) #20	PAN3 (ENSODEG00000005038) #22	ENSODEG00000006016	ENSODEG00000006274 #23	ENSODEG00000005111 #26	ENSODEG00000005569	SLC46A3 (ENSODEG00000006238) #27	ENSODEG00000006635	ENSODEG00000005871 #29	SLC7A1 (ENSODEG00000005306) #31	ENSODEG00000005438	UBL3 (ENSODEG00000005571) #33	KATNAL1 (ENSODEG00000005926) #34	ENSODEG00000006120 ##37	USPL1 (ENSODEG00000007176)	ALOX5AP (ENSODEG00000005645)	MEDAG (ENSODEG00000005967)
Long-tailed chinchilla	MODERN SPECIES	204	CDK8 (ENSCLAG00000003311)	WASF3 (ENSCLAG00000003372)	GPR12 (ENSCLAG00000003409) #7	USP12 (ENSCLAG00000003543) #8	Rpl21 (ENSCLAG00000003656) #9	RASL11A (ENSCLAG00000003867) #10	GTF3A (ENSCLAG00000003912) #11	MTIF3 (ENSCLAG00000004080) #12	LNX2 (ENSCLAG00000004148) #13	POLR1D (ENSCLAG00000017623) #14	ENSCLAG00000004320	GSX1 (ENSCLAG00000004357) #15	PDX1 (ENSCLAG00000006652) #16	CDX2 (ENSCLAG00000006810) #18	FLT3 (ENSCLAG00000007093) #20	PAN3 (ENSCLAG00000007575) #22	FLT1 (ENSCLAG00000008187) #23	POMP (ENSCLAG00000008609) #26	SLC46A3 (ENSCLAG00000009379) #27
Guinea pig	MODERN SPECIES	6	RNF6 (ENSCPOG00000009120)	CDK8 (ENSCPOG00000040435)	WASF3 (ENSCPOG00000010156)	ENSCPOG00000020112	USP12 (ENSCPOG00000005241) #8	ENSCPOG00000008784 ##9	RASL11A (ENSCPOG00000031264) #10	GTF3A (ENSCPOG00000010143) #11	MTIF3 (ENSCPOG00000010148) #12	LNX2 (ENSCPOG00000010152) #13	ENSCPOG00000033461	ENSCPOG00000026854	PDX1 (ENSCPOG00000024534) #16	CDX2 (ENSCPOG00000007276) #18	FLT3 (ENSCPOG00000007285) #20	PAN3 (ENSCPOG00000013349) #22	FLT1 (ENSCPOG00000013357) #23	POMP (ENSCPOG00000001710) #26	SLC46A3 (ENSCPOG00000015460) #27	ENSCPOG00000005581 #29	SLC7A1 (ENSCPOG00000005590) #31	UBL3 (ENSCPOG00000036242) #33	KATNAL1 (ENSCPOG00000000804) #34	HMGB1 (ENSCPOG00000031835) #37	USPL1 (ENSCPOG00000009937)	ALOX5AP (ENSCPOG00000032690)	MEDAG (ENSCPOG00000003921)	ENSCPOG00000007441	ENSCPOG00000035490	B3GLCT (ENSCPOG00000007455)	RXFP2 (ENSCPOG00000009157)
Naked mole-rat female	MODERN SPECIES	2	WASF3 (ENSHGLG00000006350)	GPR12 (ENSHGLG00000042343) #7	ENSHGLG00000006711 #8	ENSHGLG00000005660 ##9	RASL11A (ENSHGLG00000005304) #10	ENSHGLG00000004173 #11	MTIF3 (ENSHGLG00000003959) #12	LNX2 (ENSHGLG00000003410) #13	POLR1D (ENSHGLG00000039229) #14	ENSHGLG00000003202	GSX1 (ENSHGLG00000039858) #15	PDX1 (ENSHGLG00000010243) #16	CDX2 (ENSHGLG00000009166) #18	URAD (ENSHGLG00000008479) #19	FLT3 (ENSHGLG00000005717) #20	PAN3 (ENSHGLG00000018782) #22	FLT1 (ENSHGLG00000003643) #23	ENSHGLG00000008991 #26	SLC46A3 (ENSHGLG00000007999) #27	ENSHGLG00000039882 ##26	ENSHGLG00000012383	ENSHGLG00000013589 #29	ENSHGLG00000019220 #31	ENSHGLG00000033244	UBL3 (ENSHGLG00000040587) #33	KATNAL1 (ENSHGLG00000003538) #34	ENSHGLG00000003352 ##37	USPL1 (ENSHGLG00000036213)	ALOX5AP (ENSHGLG00000013689)	MEDAG (ENSHGLG00000037818)	TEX26 (ENSHGLG00000018916)
Sciuridae	ANCESTRAL SPECIES	34	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.a.b.a ##9	ENSGT00940000153284.a.g.a ##8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Marmotini	ANCESTRAL SPECIES	29	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.a.b.a ##9	ENSGT00940000153284.a.g.a ##8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00950000183120.e.b.a.a.b.b.b.b ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.a.b.a ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Squirrel	MODERN SPECIES	72	SLITRK5 (ENSSTOG00000022257)	GPR12 (ENSSTOG00000011362) #7	ENSSTOG00000023839	USP12 (ENSSTOG00000011364) #8	ENSSTOG00000033637 ##9	RASL11A (ENSSTOG00000023879) #10	GTF3A (ENSSTOG00000013853) #11	MTIF3 (ENSSTOG00000013866) #12	LNX2 (ENSSTOG00000013869) #13	POLR1D (ENSSTOG00000013877) #14	GSX1 (ENSSTOG00000029234) #15	PDX1 (ENSSTOG00000028173) #16	ENSSTOG00000002918 #18	ENSSTOG00000028014	FLT3 (ENSSTOG00000002925) #20	PAN3 (ENSSTOG00000009453) #22	FLT1 (ENSSTOG00000021178) #23	POMP (ENSSTOG00000013687) #26	SLC46A3 (ENSSTOG00000013694) #27	ENSSTOG00000022794 #29	SLC7A1 (ENSSTOG00000012771) #31	UBL3 (ENSSTOG00000012777) #33	KATNAL1 (ENSSTOG00000008802) #34	ENSSTOG00000000443 ##37	USPL1 (ENSSTOG00000028023)	ALOX5AP (ENSSTOG00000010915)	MEDAG (ENSSTOG00000003534)	ENSSTOG00000020892	HSPH1 (ENSSTOG00000001700)	B3GLCT (ENSSTOG00000001710)	RXFP2 (ENSSTOG00000010636)
Arctic ground squirrel	MODERN SPECIES	58		SLITRK5 (ENSUPAG00010018031)	GPR12 (ENSUPAG00010018043) #7	USP12 (ENSUPAG00010018049) #8	ENSUPAG00010018061 ##9	RASL11A (ENSUPAG00010018073) #10	GTF3A (ENSUPAG00010018082) #11	MTIF3 (ENSUPAG00010018090) #12	LNX2 (ENSUPAG00010018096) #13	POLR1D (ENSUPAG00010018107) #14	GSX1 (ENSUPAG00010018112) #15	PDX1 (ENSUPAG00010018122) #16	CDX2 (ENSUPAG00010018125) #18	ENSUPAG00010018133	FLT3 (ENSUPAG00010018139) #20	PAN3 (ENSUPAG00010000039) #22	FLT1 (ENSUPAG00010000212) #23	POMP (ENSUPAG00010000279) #26	SLC46A3 (ENSUPAG00010000307) #27	ENSUPAG00010000323	ENSUPAG00010000338 #29	SLC7A1 (ENSUPAG00010000429) #31	UBL3 (ENSUPAG00010000449) #33	KATNAL1 (ENSUPAG00010000483) #34	ENSUPAG00010000514 ##37	USPL1 (ENSUPAG00010000537)	ALOX5AP (ENSUPAG00010000582)	MEDAG (ENSUPAG00010000596)	TEX26 (ENSUPAG00010000608)	ENSUPAG00010000650	HSPH1 (ENSUPAG00010000704)
Alpin marmot	MODERN SPECIES	13	ENSMMMG00000021355	SLITRK5 (ENSMMMG00000021362)	GPR12 (ENSMMMG00000021388) #7	ENSMMMG00000021396	ENSMMMG00000021402 ##8	RPL21 (ENSMMMG00000021415) ##9	RASL11A (ENSMMMG00000021424) #10	GTF3A (ENSMMMG00000021436) #11	MTIF3 (ENSMMMG00000021440) #12	LNX2 (ENSMMMG00000021459) #13	POLR1D (ENSMMMG00000021469) #14	GSX1 (ENSMMMG00000021480) #15	CDX2 (ENSMMMG00000021482) #18	ENSMMMG00000021485	FLT3 (ENSMMMG00000021498) #20	PAN3 (ENSMMMG00000021592) #22	FLT1 (ENSMMMG00000021722) #23	POMP (ENSMMMG00000021745) #26	SLC46A3 (ENSMMMG00000021759) #27	ENSMMMG00000021777 #29	SLC7A1 (ENSMMMG00000021811) #31	UBL3 (ENSMMMG00000021836) #33	KATNAL1 (ENSMMMG00000021861) #34	ENSMMMG00000021875 ##37	ENSMMMG00000021912	ALOX5AP (ENSMMMG00000021924)	MEDAG (ENSMMMG00000021928)	TEX26 (ENSMMMG00000021931)	ENSMMMG00000021936	HSPH1 (ENSMMMG00000021945)	B3GLCT (ENSMMMG00000022023)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005000440	ENSSVLG00005000420	GPR12 (ENSSVLG00005000385) #7	ENSSVLG00005000350 ##8	ENSSVLG00005000213 ##9	RASL11A (ENSSVLG00005023466) #10	GTF3A (ENSSVLG00005023413) #11	MTIF3 (ENSSVLG00005023396) #12	LNX2 (ENSSVLG00005023366) #13	POLR1D (ENSSVLG00005023318) #14	GSX1 (ENSSVLG00005023295) #15	PDX1 (ENSSVLG00005023276) #16	CDX2 (ENSSVLG00005023249) #18	URAD (ENSSVLG00005023233) #19	FLT3 (ENSSVLG00005023095) #20	PAN3 (ENSSVLG00005022998) #22	FLT1 (ENSSVLG00005022893) #23	POMP (ENSSVLG00005022839) #26	SLC46A3 (ENSSVLG00005022784) #27	MTUS2 (ENSSVLG00005022484) #29	SLC7A1 (ENSSVLG00005022416) #31	UBL3 (ENSSVLG00005022374) #33	KATNAL1 (ENSSVLG00005022343) #34	ENSSVLG00005022302 #37	USPL1 (ENSSVLG00005022232)	ALOX5AP (ENSSVLG00005022177)	MEDAG (ENSSVLG00005022152)	TEX26 (ENSSVLG00005022083)	ENSSVLG00005021904	HSPH1 (ENSSVLG00005021367)	B3GLCT (ENSSVLG00005021156)
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b ##9	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Myomorpha	ANCESTRAL SPECIES	46	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Muroidea	ANCESTRAL SPECIES	68	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Muroidea_A	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.d ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Cricetidae	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.d ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.d ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Chinese hamster chok1gshd	MODERN SPECIES	130	Gpr12 (ENSCGRG00001003285) #7	ENSCGRG00001021742 #8	Rpl21 (ENSCGRG00001007602) ##9	Rasl11a (ENSCGRG00001014752) #10	Gtf3a (ENSCGRG00001024969) #11	Mtif3 (ENSCGRG00001024612) #12	ENSCGRG00001024532	Lnx2 (ENSCGRG00001022751) #13	Polr1d (ENSCGRG00001021251) #14	Gsx1 (ENSCGRG00001017641) #15	Pdx1 (ENSCGRG00001024891) #16	Cdx2 (ENSCGRG00001024259) #18	Urad (ENSCGRG00001021146)	Flt3 (ENSCGRG00001010328) #20	ENSCGRG00001012489	Pan3 (ENSCGRG00001024986) #22	Flt1 (ENSCGRG00001000764) #23	Pomp (ENSCGRG00001000803) #26	Slc46a3 (ENSCGRG00001023870) #27	ENSCGRG00001001206	Mtus2 (ENSCGRG00001023648) #29	Slc7a1 (ENSCGRG00001019393) #31	Ubl3 (ENSCGRG00001002093) #33	Katnal1 (ENSCGRG00001024027) #34	ENSCGRG00001018342	Alox5ap (ENSCGRG00001018470)	ENSCGRG00001025063	Medag (ENSCGRG00001024417)	Tex26 (ENSCGRG00001015836)	Wdr95 (ENSCGRG00001015579)	Hsph1 (ENSCGRG00001021270)
Golden Hamster	MODERN SPECIES	762	Rfc3 (ENSMAUG00000016464)	Gpr12 (ENSMAUG00000015064) #7	ENSMAUG00000010877	Usp12 (ENSMAUG00000010310) #8	ENSMAUG00000006957 ##9	Rasl11a (ENSMAUG00000019356) #10	Gtf3a (ENSMAUG00000016253) #11	Mtif3 (ENSMAUG00000011167) #12	Lnx2 (ENSMAUG00000009457) #13	Polr1d (ENSMAUG00000001946) #14	Pdx1 (ENSMAUG00000021082) #16	Cdx2 (ENSMAUG00000020822) #18	Urad (ENSMAUG00000019946)	ENSMAUG00000001106	Flt3 (ENSMAUG00000011952) #20	Pan3 (ENSMAUG00000021155) #22	Flt1 (ENSMAUG00000006859) #23	Pomp (ENSMAUG00000006509) #26	ENSMAUG00000020285	ENSMAUG00000018323 #29	Slc7a1 (ENSMAUG00000000359) #31	Ubl3 (ENSMAUG00000016399) #33	Katnal1 (ENSMAUG00000007731) #34	ENSMAUG00000017646	ENSMAUG00000013736	Alox5ap (ENSMAUG00000012262)	Medag (ENSMAUG00000009604)	Tex26 (ENSMAUG00000016345)	Wdr95 (ENSMAUG00000014604)	Hsph1 (ENSMAUG00000002443)	B3glct (ENSMAUG00000018787)
Cricetidae_B	ANCESTRAL SPECIES	49	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.d ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Prairie vole	MODERN SPECIES	7	ENSMOCG00000017944	Gpr12 (ENSMOCG00000009890) #7	Usp12 (ENSMOCG00000001714) #8	Rpl21 (ENSMOCG00000003487) ##9	Rasl11a (ENSMOCG00000000626) #10	ENSMOCG00000017124	Gtf3a (ENSMOCG00000004408) #11	Mtif3 (ENSMOCG00000017226) #12	Lnx2 (ENSMOCG00000022088) #13	Polr1d (ENSMOCG00000021288) #14	Gsx1 (ENSMOCG00000002374) #15	Pdx1 (ENSMOCG00000007886) #16	Cdx2 (ENSMOCG00000010222) #18	Urad (ENSMOCG00000018154)	Flt3 (ENSMOCG00000015945) #20	Pan3 (ENSMOCG00000001443) #22	Flt1 (ENSMOCG00000019790) #23	ENSMOCG00000000648	Pomp (ENSMOCG00000006131) #26	Slc46a3 (ENSMOCG00000007090) #27	Mtus2 (ENSMOCG00000013900) #29	Slc7a1 (ENSMOCG00000022298) #31	Ubl3 (ENSMOCG00000012896) #33	Katnal1 (ENSMOCG00000013914) #34	ENSMOCG00000018161 ##37	ENSMOCG00000018612	Alox5ap (ENSMOCG00000018258)	Medag (ENSMOCG00000012447)	Tex26 (ENSMOCG00000013830)	Wdr95 (ENSMOCG00000021942)	Hsph1 (ENSMOCG00000019013)
Northern American deer mouse	MODERN SPECIES	15	Wasf3 (ENSPEMG00000011510)	ENSPEMG00000030961	Gpr12 (ENSPEMG00000010665) #7	Usp12 (ENSPEMG00000008193) #8	Rpl21 (ENSPEMG00000006041) ##9	Rasl11a (ENSPEMG00000004475) #10	Gtf3a (ENSPEMG00000003201) #11	Mtif3 (ENSPEMG00000000930) #12	Lnx2 (ENSPEMG00000008280) #13	Polr1d (ENSPEMG00000006336) #14	Gsx1 (ENSPEMG00000004992) #15	Pdx1 (ENSPEMG00000001176) #16	Cdx2 (ENSPEMG00000000632) #18	Urad (ENSPEMG00000025423)	Flt3 (ENSPEMG00000012278) #20	Pan3 (ENSPEMG00000008992) #22	Flt1 (ENSPEMG00000019000) #23	ENSPEMG00000014341 #26	Slc46a3 (ENSPEMG00000014019) #27	ENSPEMG00000024696	Mtus2 (ENSPEMG00000011863) #29	Slc7a1 (ENSPEMG00000006808) #31	Ubl3 (ENSPEMG00000010779) #33	Katnal1 (ENSPEMG00000009164) #34	ENSPEMG00000000834 ##37	Uspl1 (ENSPEMG00000003660)	Alox5ap (ENSPEMG00000000576)	Medag (ENSPEMG00000000331)	Tex26 (ENSPEMG00000019024)	Wdr95 (ENSPEMG00000016428)	Hsph1 (ENSPEMG00000009941)
Murinae	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.c.c.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00960000191336	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Mus	ANCESTRAL SPECIES	17	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.c.c.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00960000191336	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.c.c.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00960000191336	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.c.c.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00960000191336	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.b.c.c.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a.n #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00960000191336	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
spretus	MODERN SPECIES	14	Cdk8 (MGP_SPRETEiJ_G0029023)	Wasf3 (MGP_SPRETEiJ_G0029024)	Gpr12 (MGP_SPRETEiJ_G0029025) #7	Usp12 (MGP_SPRETEiJ_G0029026) #8	MGP_SPRETEiJ_G0029027 ##9	Rasl11a (MGP_SPRETEiJ_G0029028) #10	Gtf3a (MGP_SPRETEiJ_G0029029) #11	Mtif3 (MGP_SPRETEiJ_G0029030) #12	Lnx2 (MGP_SPRETEiJ_G0029031) #13	Polr1d (MGP_SPRETEiJ_G0029032) #14	Gsx1 (MGP_SPRETEiJ_G0029033) #15	Pdx1 (MGP_SPRETEiJ_G0029034) #16	Cdx2 (MGP_SPRETEiJ_G0029035) #18	Urad (MGP_SPRETEiJ_G0029036)	Flt3 (MGP_SPRETEiJ_G0029037) #20	Pan3 (MGP_SPRETEiJ_G0029038) #22	Flt1 (MGP_SPRETEiJ_G0029039) #23	Pomp (MGP_SPRETEiJ_G0029040) #26	Slc46a3 (MGP_SPRETEiJ_G0029041) #27	Mtus2 (MGP_SPRETEiJ_G0029042) #29	Slc7a1 (MGP_SPRETEiJ_G0029043) #31	Ubl3 (MGP_SPRETEiJ_G0029044) #33	MGP_SPRETEiJ_G0029045 #34	MGP_SPRETEiJ_G0029046 #34	MGP_SPRETEiJ_G0029047 ##37	Uspl1 (MGP_SPRETEiJ_G0029048)	Alox5ap (MGP_SPRETEiJ_G0029049)	Medag (MGP_SPRETEiJ_G0029050)	Tex26 (MGP_SPRETEiJ_G0029051)	Wdr95 (MGP_SPRETEiJ_G0029052)	Hsph1 (MGP_SPRETEiJ_G0029053)
Steppe mouse	MODERN SPECIES	3364	Gpr12 (ENSMSIG00000024129) #7	ENSMSIG00000024119	Usp12 (ENSMSIG00000024096) #8	ENSMSIG00000024049 ##9	Rasl11a (ENSMSIG00000024039) #10	Gtf3a (ENSMSIG00000024026) #11	Mtif3 (ENSMSIG00000024005) #12	Lnx2 (ENSMSIG00000023999) #13	ENSMSIG00000023978 #14	Gsx1 (ENSMSIG00000023969) #15	Pdx1 (ENSMSIG00000023956) #16	Cdx2 (ENSMSIG00000023947) #18	ENSMSIG00000023941 #19	ENSMSIG00000023930	Flt3 (ENSMSIG00000023851) #20	Pan3 (ENSMSIG00000023687) #22	Flt1 (ENSMSIG00000023642) #23	ENSMSIG00000023628	Pomp (ENSMSIG00000023598) #26	Slc46a3 (ENSMSIG00000023578) #27	Mtus2 (ENSMSIG00000023484) #29	Slc7a1 (ENSMSIG00000023421) #31	Ubl3 (ENSMSIG00000023402) #33	Katnal1 (ENSMSIG00000023377) #34	ENSMSIG00000023332 #37	Uspl1 (ENSMSIG00000023285)	Alox5ap (ENSMSIG00000023243)	ENSMSIG00000023226	Medag (ENSMSIG00000023188)	Tex26 (ENSMSIG00000023128)	Wdr95 (ENSMSIG00000023065)
Mouse	MODERN SPECIES	14	Gm3409 (ENSMUSG00000096664)	Gm3415 (ENSMUSG00000095557)	Gpr12 (ENSMUSG00000041468) #7	Usp12 (ENSMUSG00000029640) #8	Rpl21 (ENSMUSG00000041453) ##9	Rasl11a (ENSMUSG00000029641) #10	Gtf3a (ENSMUSG00000016503) #11	Mtif3 (ENSMUSG00000016510) #12	Lnx2 (ENSMUSG00000016520) #13	Polr1d (ENSMUSG00000029642) #14	Gsx1 (ENSMUSG00000053129) #15	Pdx1 (ENSMUSG00000029644) #16	Cdx2 (ENSMUSG00000029646) #18	Urad (ENSMUSG00000075543)	Flt3 (ENSMUSG00000042817) #20	Pan3 (ENSMUSG00000029647) #22	Flt1 (ENSMUSG00000029648) #23	Pomp (ENSMUSG00000029649) #26	Slc46a3 (ENSMUSG00000029650) #27	Mtus2 (ENSMUSG00000029651) #29	Slc7a1 (ENSMUSG00000041313) #31	Ubl3 (ENSMUSG00000001687) #33	Katnal1 (ENSMUSG00000041298) #34	Hmgb1 (ENSMUSG00000066551) ##37	Uspl1 (ENSMUSG00000041264)	Alox5ap (ENSMUSG00000060063)	Medag (ENSMUSG00000029659)	Tex26 (ENSMUSG00000029660)	Wdr95 (ENSMUSG00000029658)	Hsph1 (ENSMUSG00000029657)	B3glct (ENSMUSG00000051950)
Ryukyu mouse	MODERN SPECIES	14	Cdk8 (MGP_CAROLIEiJ_G0028025)	Wasf3 (MGP_CAROLIEiJ_G0028026)	Gpr12 (MGP_CAROLIEiJ_G0028027) #7	Usp12 (MGP_CAROLIEiJ_G0028028) #8	Rpl21 (MGP_CAROLIEiJ_G0028029) ##9	Rasl11a (MGP_CAROLIEiJ_G0028030) #10	Gtf3a (MGP_CAROLIEiJ_G0028031) #11	Mtif3 (MGP_CAROLIEiJ_G0028032) #12	Lnx2 (MGP_CAROLIEiJ_G0028033) #13	Polr1d (MGP_CAROLIEiJ_G0028034) #14	Gsx1 (MGP_CAROLIEiJ_G0028035) #15	Pdx1 (MGP_CAROLIEiJ_G0028036) #16	Cdx2 (MGP_CAROLIEiJ_G0028037) #18	Urad (MGP_CAROLIEiJ_G0028038)	Flt3 (MGP_CAROLIEiJ_G0028039) #20	Pan3 (MGP_CAROLIEiJ_G0028040) #22	Flt1 (MGP_CAROLIEiJ_G0028041) #23	Pomp (MGP_CAROLIEiJ_G0028042) #26	Slc46a3 (MGP_CAROLIEiJ_G0028043) #27	Mtus2 (MGP_CAROLIEiJ_G0028044) #29	Slc7a1 (MGP_CAROLIEiJ_G0028045) #31	Ubl3 (MGP_CAROLIEiJ_G0028046) #33	MGP_CAROLIEiJ_G0028047 #34	MGP_CAROLIEiJ_G0028048 #34	MGP_CAROLIEiJ_G0028049 ##37	Uspl1 (MGP_CAROLIEiJ_G0028050)	MGP_CAROLIEiJ_G0028051	Medag (MGP_CAROLIEiJ_G0028052)	Tex26 (MGP_CAROLIEiJ_G0028053)	Wdr95 (MGP_CAROLIEiJ_G0028054)	Hsph1 (MGP_CAROLIEiJ_G0028055)
Shrew mouse	MODERN SPECIES	15	Cdk8 (MGP_PahariEiJ_G0024591)	Wasf3 (MGP_PahariEiJ_G0024592)	Gpr12 (MGP_PahariEiJ_G0024593) #7	Usp12 (MGP_PahariEiJ_G0024594) #8	MGP_PahariEiJ_G0024595 ##9	Rasl11a (MGP_PahariEiJ_G0024596) #10	Gtf3a (MGP_PahariEiJ_G0024597) #11	Mtif3 (MGP_PahariEiJ_G0024598) #12	Lnx2 (MGP_PahariEiJ_G0024599) #13	Polr1d (MGP_PahariEiJ_G0024600) #14	Gsx1 (MGP_PahariEiJ_G0024601) #15	Pdx1 (MGP_PahariEiJ_G0024602) #16	Cdx2 (MGP_PahariEiJ_G0024603) #18	Urad (MGP_PahariEiJ_G0024604)	Flt3 (MGP_PahariEiJ_G0024605) #20	Pan3 (MGP_PahariEiJ_G0024606) #22	Flt1 (MGP_PahariEiJ_G0024607) #23	MGP_PahariEiJ_G0024608	Slc46a3 (MGP_PahariEiJ_G0024609) #27	Mtus2 (MGP_PahariEiJ_G0024610) #29	Slc7a1 (MGP_PahariEiJ_G0024611) #31	Ubl3 (MGP_PahariEiJ_G0024612) #33	MGP_PahariEiJ_G0024613 #34	MGP_PahariEiJ_G0024614 #34	MGP_PahariEiJ_G0024615 ##37	Uspl1 (MGP_PahariEiJ_G0024616)	Alox5ap (MGP_PahariEiJ_G0024617)	Medag (MGP_PahariEiJ_G0024618)	Tex26 (MGP_PahariEiJ_G0024619)	MGP_PahariEiJ_G0024620	Hsph1 (MGP_PahariEiJ_G0024621)
Rat	MODERN SPECIES	3	LOC120095889 (ENSRNOG00000050264)	Wasf3 (ENSRNOG00000048898)	Gpr12 (ENSRNOG00000039832) #7	Usp12 (ENSRNOG00000033411) #8	Rpl21 (ENSRNOG00000000957) ##9	Rasl11a (ENSRNOG00000000956) #10	Gtf3a (ENSRNOG00000050016) #11	Mtif3 (ENSRNOG00000070811) #12	Lnx2 (ENSRNOG00000000955) #13	Polr1d (ENSRNOG00000000954) #14	Gsx1 (ENSRNOG00000000952) #15	Pdx1 (ENSRNOG00000046458) #16	Cdx2 (ENSRNOG00000032759) #18	Urad (ENSRNOG00000050360)	Flt3 (ENSRNOG00000054764) #20	Pan3 (ENSRNOG00000000942) #22	Flt1 (ENSRNOG00000000940) #23	Pomp (ENSRNOG00000049229) ##26	Slc46a3 (ENSRNOG00000000937) #27	Mtus2 (ENSRNOG00000032410) #29	Slc7a1 (ENSRNOG00000000924) #31	Katnal1 (ENSRNOG00000047618) #34	Rpl35a-ps6 (ENSRNOG00000069961)	AABR07035218.1 (ENSRNOG00000029813) ##37	Uspl1 (ENSRNOG00000000909)	Alox5ap (ENSRNOG00000000907)	AABR07035203.1 (ENSRNOG00000060198)	Medag (ENSRNOG00000000906)	Tex26 (ENSRNOG00000000905)	Wdr95 (ENSRNOG00000000904)	Hsph1 (ENSRNOG00000000902)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1878	Usp12 (ENSNGAG00000023867) #8	ENSNGAG00000012493	ENSNGAG00000022375 #9	Rasl11a (ENSNGAG00000021721) #10	Gtf3a (ENSNGAG00000023691) #11	Mtif3 (ENSNGAG00000022911) #12	Lnx2 (ENSNGAG00000010972) #13	Polr1d (ENSNGAG00000006014) #14	ENSNGAG00000019459	ENSNGAG00000020643	Gsx1 (ENSNGAG00000013964) #15	ENSNGAG00000011527	Pdx1 (ENSNGAG00000024275) #16	Cdx2 (ENSNGAG00000019299) #18	Flt3 (ENSNGAG00000022203) #20	Pan3 (ENSNGAG00000005671) #22	Flt1 (ENSNGAG00000022615) #23	ENSNGAG00000019389 #26	Slc46a3 (ENSNGAG00000023221) #27	ENSNGAG00000022087	ENSNGAG00000011243 ##29	ENSNGAG00000023043 #29	Slc7a1 (ENSNGAG00000011095) #31	Ubl3 (ENSNGAG00000021531) #33	Katnal1 (ENSNGAG00000018344) #34	ENSNGAG00000020735 #37	Uspl1 (ENSNGAG00000021450)	Alox5ap (ENSNGAG00000010455)	Medag (ENSNGAG00000021713)	Tex26 (ENSNGAG00000016306)	ENSNGAG00000021744
Lesser Egyptian jerboa	MODERN SPECIES	73	Cdk8 (ENSJJAG00000009532)	Wasf3 (ENSJJAG00000018294)	Gpr12 (ENSJJAG00000012507) #7	Usp12 (ENSJJAG00000019341) #8	Rasl11a (ENSJJAG00000020910) #10	Gtf3a (ENSJJAG00000011501) #11	Mtif3 (ENSJJAG00000013006) #12	Lnx2 (ENSJJAG00000014998) #13	ENSJJAG00000022671 #14	ENSJJAG00000009076	Gsx1 (ENSJJAG00000021574) #15	Pdx1 (ENSJJAG00000017468) #16	Cdx2 (ENSJJAG00000010229) #18	Urad (ENSJJAG00000022682)	Flt3 (ENSJJAG00000004796) #20	Pan3 (ENSJJAG00000013560) #22	Flt1 (ENSJJAG00000009276) #23	Pomp (ENSJJAG00000014017) #26	Slc46a3 (ENSJJAG00000015117) #27	ENSJJAG00000008307 #29	Slc7a1 (ENSJJAG00000022034) #31	Ubl3 (ENSJJAG00000016514) #33	Katnal1 (ENSJJAG00000011429) #34	ENSJJAG00000000696 ##37	ENSJJAG00000014544	Alox5ap (ENSJJAG00000004614)	Medag (ENSJJAG00000017396)	Tex26 (ENSJJAG00000007098)	Wdr95 (ENSJJAG00000015306)	Hsph1 (ENSJJAG00000000436)	B3glct (ENSJJAG00000022078)
Kangaroo rat	MODERN SPECIES	421	Wasf3 (ENSDORG00000003345)	Gpr12 (ENSDORG00000011141) #7	Usp12 (ENSDORG00000009137) #8	ENSDORG00000002224	ENSDORG00000002226 ##9	Rasl11a (ENSDORG00000026016) #10	Gtf3a (ENSDORG00000006079) #11	ENSDORG00000006081 #12	Lnx2 (ENSDORG00000013453) #13	Polr1d (ENSDORG00000029155) #14	Gsx1 (ENSDORG00000029182) #15	Pdx1 (ENSDORG00000008418) #16	Cdx2 (ENSDORG00000005495) #18	Urad (ENSDORG00000025006)	Flt3 (ENSDORG00000010727) #20	Pan3 (ENSDORG00000014727) #22	Flt1 (ENSDORG00000014729) #23	Pomp (ENSDORG00000012432) #26	Slc46a3 (ENSDORG00000012433) #27	ENSDORG00000025782 #29	Slc7a1 (ENSDORG00000006086) #31	ENSDORG00000026706	Ubl3 (ENSDORG00000026903) #33	Katnal1 (ENSDORG00000012794) #34	ENSDORG00000027930 ##37	Uspl1 (ENSDORG00000007790)	Alox5ap (ENSDORG00000006041)	Medag (ENSDORG00000008557)	ENSDORG00000008558	Wdr95 (ENSDORG00000026485)	ENSDORG00000014903
Lagomorpha	ANCESTRAL SPECIES	166				ENSGT00940000153284.a.h #8	ENSGT00950000182922.a.a.a.b.a.a.b.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31
Rabbit	MODERN SPECIES	468			USP12 (ENSOCUG00000007088) #8	ENSOCUG00000002506 #9	RASL11A (ENSOCUG00000008121) #10	ENSOCUG00000038419	GTF3A (ENSOCUG00000011713) #11	MTIF3 (ENSOCUG00000011721) #12	LNX2 (ENSOCUG00000015683) #13	ENSOCUG00000015706	GSX1 (ENSOCUG00000023424) #15	PDX1 (ENSOCUG00000004891) #16	CDX2 (ENSOCUG00000004893) #18	URAD (ENSOCUG00000026219) #19	FLT3 (ENSOCUG00000004897) #20	PAN3 (ENSOCUG00000008509) #22	FLT1 (ENSOCUG00000008523) #23	POMP (ENSOCUG00000010137) #26	SLC46A3 (ENSOCUG00000010129) #27	ENSOCUG00000013473 #29	ENSOCUG00000030839 #29	SLC7A1 (ENSOCUG00000013493) #31
Pika	MODERN SPECIES	2256																PAN3 (ENSOPRG00000016465) #22	FLT1 (ENSOPRG00000016484) #23	POMP (ENSOPRG00000016517) #26	SLC46A3 (ENSOPRG00000016527) #27
Tree shrew	MODERN SPECIES	2583																PAN3 (ENSTBEG00000017359) #22	FLT1 (ENSTBEG00000009960) #23
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b ##9	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967
Eulipotyphla	ANCESTRAL SPECIES	1148																ENSGT00390000001504 #22	ENSGT00940000158713 #23
Common shrew	MODERN SPECIES	3681																PAN3 (ENSSARG00000012201) #22
Hedgehog	MODERN SPECIES	4760																PAN3 (ENSEEUG00000014833) #22	FLT1 (ENSEEUG00000014914) #23
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Suina	ANCESTRAL SPECIES	29	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00950000182922.a.a.a.b.a.a.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Chacoan peccary	MODERN SPECIES	216	GPR12 (ENSCWAG00000018600) #7	ENSCWAG00000018581	USP12 (ENSCWAG00000018548) #8	RPL21 (ENSCWAG00000018513) ##9	RASL11A (ENSCWAG00000018481) #10	ENSCWAG00000018472	GTF3A (ENSCWAG00000018454) #11	MTIF3 (ENSCWAG00000018433) #12	LNX2 (ENSCWAG00000018415) #13	POLR1D (ENSCWAG00000018355) #14	GSX1 (ENSCWAG00000018331) #15	PDX1 (ENSCWAG00000018319) #16	CDX2 (ENSCWAG00000018265) #18	URAD (ENSCWAG00000018244) #19	FLT3 (ENSCWAG00000018108) #20	PAN3 (ENSCWAG00000018033) #22	FLT1 (ENSCWAG00000017867) #23	ENSCWAG00000017809	POMP (ENSCWAG00000017771) #26	SLC46A3 (ENSCWAG00000017732) #27	MTUS2 (ENSCWAG00000017501) #29	SLC7A1 (ENSCWAG00000017449) #31	UBL3 (ENSCWAG00000017400) #33	KATNAL1 (ENSCWAG00000017366) #34	HMGB1 (ENSCWAG00000017323) #37	USPL1 (ENSCWAG00000017300)	ALOX5AP (ENSCWAG00000017261)	MEDAG (ENSCWAG00000017233)	TEX26 (ENSCWAG00000017184)	ENSCWAG00000017090	HSPH1 (ENSCWAG00000016864)
Pig	MODERN SPECIES	2	WASF3 (ENSSSCG00000009300)	ENSSSCG00000042074	GPR12 (ENSSSCG00000009301) #7	USP12 (ENSSSCG00000009302) #8	ENSSSCG00000009303 #9	RASL11A (ENSSSCG00000039890) #10	GTF3A (ENSSSCG00000009305) #11	MTIF3 (ENSSSCG00000037313) #12	LNX2 (ENSSSCG00000009308) #13	POLR1D (ENSSSCG00000009310) #14	GSX1 (ENSSSCG00000009313) #15	PDX1 (ENSSSCG00000055811) #16	CDX2 (ENSSSCG00000009317) #18	ENSSSCG00000009316	FLT3 (ENSSSCG00000009314) #20	PAN3 (ENSSSCG00000009319) #22	FLT1 (ENSSSCG00000009320) #23	POMP (ENSSSCG00000037170) #26	SLC46A3 (ENSSSCG00000009322) #27	MTUS2 (ENSSSCG00000025996) #29	SLC7A1 (ENSSSCG00000029456) #31	ENSSSCG00000035992 #33	KATNAL1 (ENSSSCG00000009326) #34	ENSSSCG00000009327 ##37	USPL1 (ENSSSCG00000028065)	ALOX5AP (ENSSSCG00000009330)	MEDAG (ENSSSCG00000009331)	TEX26 (ENSSSCG00000046261)	ENSSSCG00000009333	HSPH1 (ENSSSCG00000009334)	B3GLCT (ENSSSCG00000009335)
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Camelidae	ANCESTRAL SPECIES	14	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00390000003643	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Alpaca	MODERN SPECIES	137															FLT3 (ENSVPAG00000006354) #20	PAN3 (ENSVPAG00000006357) #22	FLT1 (ENSVPAG00000006361) #23
Arabian camel	MODERN SPECIES	5	CDK8 (ENSCDRG00005021779)	WASF3 (ENSCDRG00005021785)	GPR12 (ENSCDRG00005021787) #7	USP12 (ENSCDRG00005021790) #8	ENSCDRG00005021795 ##9	RASL11A (ENSCDRG00005021802) #10	GTF3A (ENSCDRG00005021807) #11	MTIF3 (ENSCDRG00005003341) #12	LNX2 (ENSCDRG00005003360) #13	POLR1D (ENSCDRG00005003401) #14	GSX1 (ENSCDRG00005003464) #15	PDX1 (ENSCDRG00005003496) #16	ENSCDRG00005003530 #18	ENSCDRG00005003574	FLT3 (ENSCDRG00005003607) #20	PAN3 (ENSCDRG00005003669) #22	FLT1 (ENSCDRG00005003978) #23	POMP (ENSCDRG00005004772) #26	SLC46A3 (ENSCDRG00005004813) #27	ENSCDRG00005004864 #29	ENSCDRG00005004898 #29	SLC7A1 (ENSCDRG00005004941) #31	UBL3 (ENSCDRG00005005011) #33	KATNAL1 (ENSCDRG00005005025) #34	HMGB1 (ENSCDRG00005005045) #37	USPL1 (ENSCDRG00005005085)	ALOX5AP (ENSCDRG00005005116)	MEDAG (ENSCDRG00005005141)	TEX26 (ENSCDRG00005005163)	HSPH1 (ENSCDRG00005005202)	B3GLCT (ENSCDRG00005005450)
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Cetacea	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00510000047760.j	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00510000047760.j	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00510000047760.j	ENSGT00950000183026.B.r #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00510000047760.j	ENSGT00950000183026.B.r #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00510000047760.j	ENSGT00950000183026.B.r #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Narwhal	MODERN SPECIES	315	WASF3 (ENSMMNG00015021063)	GPR12 (ENSMMNG00015021041) #7	USP12 (ENSMMNG00015021025) #8	ENSMMNG00015020992 ##9	RASL11A (ENSMMNG00015020985) #10	ENSMMNG00015020968	GTF3A (ENSMMNG00015020949) #11	MTIF3 (ENSMMNG00015020934) #12	LNX2 (ENSMMNG00015020919) #13	ENSMMNG00015020896	GSX1 (ENSMMNG00015020877) #15	PDX1 (ENSMMNG00015020863) #16	CDX2 (ENSMMNG00015020842) #18	URAD (ENSMMNG00015020821) #19	FLT3 (ENSMMNG00015020792) #20	PAN3 (ENSMMNG00015020615) #22	FLT1 (ENSMMNG00015020525) #23	ENSMMNG00015020477 #26	SLC46A3 (ENSMMNG00015020455) #27	MTUS2 (ENSMMNG00015020336) #29	SLC7A1 (ENSMMNG00015020307) #31	UBL3 (ENSMMNG00015020289) #33	KATNAL1 (ENSMMNG00015020263) #34	HMGB1 (ENSMMNG00015020245) #37	USPL1 (ENSMMNG00015020212)	ALOX5AP (ENSMMNG00015020175)	MEDAG (ENSMMNG00015020156)	HSPH1 (ENSMMNG00015020078)	B3GLCT (ENSMMNG00015019951)	RXFP2 (ENSMMNG00015019687)	FRY (ENSMMNG00015019379)
Beluga whale	MODERN SPECIES	29	WASF3 (ENSDLEG00000014723)	GPR12 (ENSDLEG00000014734) #7	USP12 (ENSDLEG00000014742) #8	RPL21 (ENSDLEG00000014757) ##9	RASL11A (ENSDLEG00000014782) #10	GTF3A (ENSDLEG00000014795) #11	MTIF3 (ENSDLEG00000014809) #12	LNX2 (ENSDLEG00000014818) #13	POLR1D (ENSDLEG00000014833) #14	ENSDLEG00000014844	GSX1 (ENSDLEG00000014854) #15	PDX1 (ENSDLEG00000014860) #16	CDX2 (ENSDLEG00000014871) #18	ENSDLEG00000014887	FLT3 (ENSDLEG00000014957) #20	PAN3 (ENSDLEG00000015462) #22	FLT1 (ENSDLEG00000015551) #23	ENSDLEG00000015594 #26	SLC46A3 (ENSDLEG00000015606) #27	ENSDLEG00000015614	MTUS2 (ENSDLEG00000015621) #29	SLC7A1 (ENSDLEG00000015661) #31	UBL3 (ENSDLEG00000015684) #33	KATNAL1 (ENSDLEG00000015700) #34	HMGB1 (ENSDLEG00000005222) ##37	USPL1 (ENSDLEG00000005228)	ALOX5AP (ENSDLEG00000005233)	MEDAG (ENSDLEG00000005244)	ENSDLEG00000005251	HSPH1 (ENSDLEG00000005268)	B3GLCT (ENSDLEG00000005311)
Vaquita	MODERN SPECIES	9	WASF3 (ENSPSNG00000009017)	ENSPSNG00000009063	GPR12 (ENSPSNG00000009076) #7	USP12 (ENSPSNG00000009102) #8	ENSPSNG00000009136 ##9	RASL11A (ENSPSNG00000009220) #10	GTF3A (ENSPSNG00000009270) #11	MTIF3 (ENSPSNG00000009318) #12	LNX2 (ENSPSNG00000009360) #13	ENSPSNG00000009434 #14	GSX1 (ENSPSNG00000009508) #15	PDX1 (ENSPSNG00000009545) #16	CDX2 (ENSPSNG00000009587) #18	URAD (ENSPSNG00000009637) #19	FLT3 (ENSPSNG00000009789) #20	PAN3 (ENSPSNG00000010591) #22	FLT1 (ENSPSNG00000010996) #23	ENSPSNG00000011404	ENSPSNG00000011451 #26	SLC46A3 (ENSPSNG00000011519) #27	ENSPSNG00000011610	ENSPSNG00000011712 #29	SLC7A1 (ENSPSNG00000011868) #31	UBL3 (ENSPSNG00000011923) #33	KATNAL1 (ENSPSNG00000011976) #34	HMGB1 (ENSPSNG00000012042) #37	USPL1 (ENSPSNG00000012125)	ALOX5AP (ENSPSNG00000012197)	ENSPSNG00000011745	MEDAG (ENSPSNG00000011804)	HSPH1 (ENSPSNG00000011882)
Dolphin	MODERN SPECIES	632													PDX1 (ENSTTRG00000002811) #16	URAD (ENSTTRG00000002812) #19	FLT3 (ENSTTRG00000002813) #20	PAN3 (ENSTTRG00000002814) #22
Sperm whale	MODERN SPECIES	4	WASF3 (ENSPCTG00005012829)	GPR12 (ENSPCTG00005012894) #7	ENSPCTG00005012908	USP12 (ENSPCTG00005012963) #8	RPL21 (ENSPCTG00005013013) ##9	RASL11A (ENSPCTG00005013101) #10	GTF3A (ENSPCTG00005013180) #11	MTIF3 (ENSPCTG00005013236) #12	LNX2 (ENSPCTG00005013292) #13	POLR1D (ENSPCTG00005013390) #14	GSX1 (ENSPCTG00005013569) #15	PDX1 (ENSPCTG00005013620) #16	CDX2 (ENSPCTG00005013676) #18	ENSPCTG00005013732	FLT3 (ENSPCTG00005013790) #20	PAN3 (ENSPCTG00005014160) #22	FLT1 (ENSPCTG00005014294) #23	POMP (ENSPCTG00005014527) #26	SLC46A3 (ENSPCTG00005014585) #27	ENSPCTG00005014618	MTUS2 (ENSPCTG00005014659) #29	SLC7A1 (ENSPCTG00005014850) #31	UBL3 (ENSPCTG00005014919) #33	KATNAL1 (ENSPCTG00005014985) #34	HMGB1 (ENSPCTG00005015034) #37	USPL1 (ENSPCTG00005015111)	ALOX5AP (ENSPCTG00005015171)	MEDAG (ENSPCTG00005015216)	TEX26 (ENSPCTG00005015295)	HSPH1 (ENSPCTG00005015496)	B3GLCT (ENSPCTG00005016496)
Blue whale	MODERN SPECIES	9	WASF3 (ENSBMSG00010014112)	GPR12 (ENSBMSG00010014207) #7	USP12 (ENSBMSG00010014225) #8	ENSBMSG00010014255 ##9	RASL11A (ENSBMSG00010014298) #10	ENSBMSG00010014311	GTF3A (ENSBMSG00010014329) #11	MTIF3 (ENSBMSG00010014375) #12	LNX2 (ENSBMSG00010014414) #13	ENSBMSG00010014466 #14	GSX1 (ENSBMSG00010014529) #15	PDX1 (ENSBMSG00010014538) #16	CDX2 (ENSBMSG00010014566) #18	URAD (ENSBMSG00010014592) #19	FLT3 (ENSBMSG00010014623) #20	PAN3 (ENSBMSG00010014764) #22	FLT1 (ENSBMSG00010014949) #23	ENSBMSG00010015155 #26	SLC46A3 (ENSBMSG00010015191) #27	ENSBMSG00010015221	ENSBMSG00010015247 #29	SLC7A1 (ENSBMSG00010015357) #31	UBL3 (ENSBMSG00010015451) #33	KATNAL1 (ENSBMSG00010015496) #34	HMGB1 (ENSBMSG00010015522) #37	USPL1 (ENSBMSG00010015554)	ALOX5AP (ENSBMSG00010015580)	MEDAG (ENSBMSG00010015612)	TEX26 (ENSBMSG00010015652)	ENSBMSG00010015688	HSPH1 (ENSBMSG00010015771)
Pecora	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Yarkand deer	MODERN SPECIES	23	GPR12 (ENSCHYG00000019276) #7	USP12 (ENSCHYG00000019156) #8	ENSCHYG00000019062 ##9	RASL11A (ENSCHYG00000019009) #10	ENSCHYG00000018814 #11	MTIF3 (ENSCHYG00000018756) #12	LNX2 (ENSCHYG00000018648) #13	ENSCHYG00000018627	ENSCHYG00000018475 #14	GSX1 (ENSCHYG00000018439) #15	PDX1 (ENSCHYG00000018394) #16	CDX2 (ENSCHYG00000018350) #18	URAD (ENSCHYG00000018294) #19	FLT3 (ENSCHYG00000017983) #20	ENSCHYG00000017919 ##25	PAN3 (ENSCHYG00000017249) #22	FLT1 (ENSCHYG00000016765) #23	ENSCHYG00000016696	ENSCHYG00000016630 #26	SLC46A3 (ENSCHYG00000016561) #27	MTUS2 (ENSCHYG00000016049) #29	SLC7A1 (ENSCHYG00000015804) #31	UBL3 (ENSCHYG00000015723) #33	KATNAL1 (ENSCHYG00000015536) #34	ENSCHYG00000015436 ##37	USPL1 (ENSCHYG00000015344)	ALOX5AP (ENSCHYG00000015250)	ENSCHYG00000015226	MEDAG (ENSCHYG00000015182)	TEX26 (ENSCHYG00000015069)	ENSCHYG00000014786
Percora_a	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Siberian musk deer	MODERN SPECIES	18	WASF3 (ENSMMSG00000003196)	GPR12 (ENSMMSG00000003186) #7	USP12 (ENSMMSG00000003167) #8	ENSMMSG00000003141 ##9	RASL11A (ENSMMSG00000003132) #10	ENSMMSG00000003107 #11	MTIF3 (ENSMMSG00000003094) #12	LNX2 (ENSMMSG00000003075) #13	POLR1D (ENSMMSG00000003040) #14	GSX1 (ENSMMSG00000003020) #15	ENSMMSG00000003007	PDX1 (ENSMMSG00000002992) #16	CDX2 (ENSMMSG00000002973) #18	URAD (ENSMMSG00000002960) #19	FLT3 (ENSMMSG00000002901) #20	PAN3 (ENSMMSG00000002825) #22	FLT1 (ENSMMSG00000002716) #23	ENSMMSG00000002681 #26	SLC46A3 (ENSMMSG00000002652) #27	MTUS2 (ENSMMSG00000002573) #29	SLC7A1 (ENSMMSG00000002527) #31	UBL3 (ENSMMSG00000002504) #33	KATNAL1 (ENSMMSG00000002485) #34	ENSMMSG00000002453 ##37	USPL1 (ENSMMSG00000002424)	ALOX5AP (ENSMMSG00000002405)	MEDAG (ENSMMSG00000002386)	TEX26 (ENSMMSG00000002369)	HSPH1 (ENSMMSG00000002127)	B3GLCT (ENSMMSG00000002053)	RXFP2 (ENSMMSG00000001942)
Bovidae	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f.e.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Bovinae	ANCESTRAL SPECIES	29	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f.e.a.a ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Bos	ANCESTRAL SPECIES	28	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f.e.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Bos_b	ANCESTRAL SPECIES	33	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f.e.a.a ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT01100000263481.n.a.b.b.a.b.b.a.a.b.a.b	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Hybrid Bos Indicus	MODERN SPECIES	3	CDK8 (ENSBIXG00005009401)	WASF3 (ENSBIXG00005009436)	GPR12 (ENSBIXG00005005366) #7	USP12 (ENSBIXG00005000510) #8	ENSBIXG00005009506 ##9	RASL11A (ENSBIXG00005009524) #10	MTIF3 (ENSBIXG00005000533) #12	ENSBIXG00005009581 #11	LNX2 (ENSBIXG00005009616) #13	POLR1D (ENSBIXG00005009666) #14	GSX1 (ENSBIXG00005009693) #15	PDX1 (ENSBIXG00005005368) #16	CDX2 (ENSBIXG00005000565) #18	ENSBIXG00005000568	FLT3 (ENSBIXG00005005466) #20	PAN3 (ENSBIXG00005005472) #22	FLT1 (ENSBIXG00005010159) #23	POMP (ENSBIXG00005010225) #26	SLC46A3 (ENSBIXG00005000810) #27	MTUS2 (ENSBIXG00005010291) #29	SLC7A1 (ENSBIXG00005006772) #31	UBL3 (ENSBIXG00005010348) #33	ENSBIXG00005000793	KATNAL1 (ENSBIXG00005000876) #34	ENSBIXG00005006774	ENSBIXG00005010515 ##37	USPL1 (ENSBIXG00005010560)	ALOX5AP (ENSBIXG00005000697)	MEDAG (ENSBIXG00005010602)	TEX26 (ENSBIXG00005010612)	ENSBIXG00005000923
Cow	MODERN SPECIES	3	WASF3 (ENSBTAG00000014619)	GPR12 (ENSBTAG00000010769) #7	USP12 (ENSBTAG00000017179) #8	RPL21 (ENSBTAG00000001648) ##9	RASL11A (ENSBTAG00000005244) #10	GTF3A (ENSBTAG00000012600) #11	MTIF3 (ENSBTAG00000020530) #12	LNX2 (ENSBTAG00000015614) #13	POLR1D (ENSBTAG00000008642) #14	ENSBTAG00000048386	GSX1 (ENSBTAG00000009166) #15	PDX1 (ENSBTAG00000010690) #16	CDX2 (ENSBTAG00000001819) #18	URAD (ENSBTAG00000013819)	FLT3 (ENSBTAG00000018572) #20	PAN3 (ENSBTAG00000009912) #22	FLT1 (ENSBTAG00000016915) #23	POMP (ENSBTAG00000014024) #26	MTUS2 (ENSBTAG00000001094) #29	SLC7A1 (ENSBTAG00000018577) #31	UBL3 (ENSBTAG00000012170) #33	ENSBTAG00000052411	KATNAL1 (ENSBTAG00000009340) #34	HMGB1 (ENSBTAG00000018103) #37	USPL1 (ENSBTAG00000001178)	ALOX5AP (ENSBTAG00000013201)	MEDAG (ENSBTAG00000008271)	TEX26 (ENSBTAG00000033386)	ENSBTAG00000016052	HSPH1 (ENSBTAG00000005012)	B3GLCT (ENSBTAG00000033412)
Bos_a	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f.e.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00940000154361.A #15	ENSGT00390000003643	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Domestic yak	MODERN SPECIES	6	ENSBGRG00000004746	USP12 (ENSBGRG00000004775) #8	ENSBGRG00000004884 ##9	RASL11A (ENSBGRG00000004923) #10	GTF3A (ENSBGRG00000004973) #11	MTIF3 (ENSBGRG00000005098) #12	LNX2 (ENSBGRG00000005122) #13	ENSBGRG00000005177	GSX1 (ENSBGRG00000005224) #15	ENSBGRG00000005241	ENSBGRG00000005252	PDX1 (ENSBGRG00000005259) #16	CDX2 (ENSBGRG00000005271) #18	ENSBGRG00000005297	FLT3 (ENSBGRG00000005369) #20	PAN3 (ENSBGRG00000005813) #22	ENSBGRG00000006167	ENSBGRG00000006327 #23	POMP (ENSBGRG00000006553) #26	SLC46A3 (ENSBGRG00000006624) #27	MTUS2 (ENSBGRG00000006670) #29	SLC7A1 (ENSBGRG00000006751) #31	UBL3 (ENSBGRG00000006856) #33	KATNAL1 (ENSBGRG00000006924) #34	ENSBGRG00000007092 ##37	ENSBGRG00000007221	USPL1 (ENSBGRG00000007239)	ALOX5AP (ENSBGRG00000007328)	MEDAG (ENSBGRG00000007441)	TEX26 (ENSBGRG00000007537)	ENSBGRG00000007607
Wild yak	MODERN SPECIES	1371															FLT3 (ENSBMUG00000023185) #20	PAN3 (ENSBMUG00000023150) #22	FLT1 (ENSBMUG00000023081) #23	POMP (ENSBMUG00000023007) #26	SLC46A3 (ENSBMUG00000023002) #27	MTUS2 (ENSBMUG00000022991) #29	SLC7A1 (ENSBMUG00000022964) #31	UBL3 (ENSBMUG00000022941) #33	KATNAL1 (ENSBMUG00000022930) #34	HMGB1 (ENSBMUG00000022917) #37	USPL1 (ENSBMUG00000022880)	ALOX5AP (ENSBMUG00000022869)	MEDAG (ENSBMUG00000022857)	TEX26 (ENSBMUG00000022841)	ENSBMUG00000022823	HSPH1 (ENSBMUG00000022797)	ENSBMUG00000022779
American bison	MODERN SPECIES	3213	WASF3 (ENSBBBG00000002463)	GPR12 (ENSBBBG00000012732) #7	USP12 (ENSBBBG00000002455) #8	ENSBBBG00000012692 ##9	RASL11A (ENSBBBG00000007545) #10	GTF3A (ENSBBBG00000012669) #11	ENSBBBG00000012643 #12	LNX2 (ENSBBBG00000012639) #13	POLR1D (ENSBBBG00000012618) #14	ENSBBBG00000012613	GSX1 (ENSBBBG00000001841) #15	PDX1 (ENSBBBG00000001839) #16	ENSBBBG00000012601 #18	URAD (ENSBBBG00000008107) #19	FLT3 (ENSBBBG00000012586) #20	PAN3 (ENSBBBG00000012554) #22	FLT1 (ENSBBBG00000012485) #23	POMP (ENSBBBG00000002357) #26	SLC46A3 (ENSBBBG00000012388) #27
Caprinae	ANCESTRAL SPECIES	28	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f.e.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424.g #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643.k	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Goat	MODERN SPECIES	3	WASF3 (ENSCHIG00000017657)	GPR12 (ENSCHIG00000007944) #7	USP12 (ENSCHIG00000006817) #8	RPL21 (ENSCHIG00000021720) ##9	RASL11A (ENSCHIG00000016902) #10	ENSCHIG00000021040 #11	ENSCHIG00000026996 #12	LNX2 (ENSCHIG00000024542) #13	POLR1D (ENSCHIG00000021910) #14	ENSCHIG00000014902	GSX1 (ENSCHIG00000026107) #15	PDX1 (ENSCHIG00000016212) #16	CDX2 (ENSCHIG00000024755) #18	ENSCHIG00000015696	FLT3 (ENSCHIG00000006089) #20	PAN3 (ENSCHIG00000010876) #22	FLT1 (ENSCHIG00000019587) #23	ENSCHIG00000007021 #26	SLC46A3 (ENSCHIG00000006252) #27	MTUS2 (ENSCHIG00000014951) #29	SLC7A1 (ENSCHIG00000017131) #31	UBL3 (ENSCHIG00000005881) #33	KATNAL1 (ENSCHIG00000011417) #34	HMGB1 (ENSCHIG00000018473) #37	USPL1 (ENSCHIG00000025535)	ALOX5AP (ENSCHIG00000020532)	MEDAG (ENSCHIG00000019733)	TEX26 (ENSCHIG00000013376)	HSPH1 (ENSCHIG00000003518)	B3GLCT (ENSCHIG00000016248)	RXFP2 (ENSCHIG00000007689)
Rambouillet Sheep	MODERN SPECIES	1	GPR12 (ENSOARG00020012619) #7	USP12 (ENSOARG00020012488) #8	ENSOARG00020012435	ENSOARG00020012335 ##9	RASL11A (ENSOARG00020012287) #10	ENSOARG00020012160 #11	ENSOARG00020012106 #11	MTIF3 (ENSOARG00020012058) #12	LNX2 (ENSOARG00020012002) #13	POLR1D (ENSOARG00020011900) #14	GSX1 (ENSOARG00020011857) #15	PDX1 (ENSOARG00020011821) #16	CDX2 (ENSOARG00020011783) #18	URAD (ENSOARG00020011747) #19	FLT3 (ENSOARG00020011519) #20	PAN3 (ENSOARG00020010540) #22	FLT1 (ENSOARG00020010103) #23	ENSOARG00020010005 #26	SLC46A3 (ENSOARG00020009919) #27	ENSOARG00020009812 #29	SLC7A1 (ENSOARG00020009646) #31	UBL3 (ENSOARG00020009591) #33	KATNAL1 (ENSOARG00020009464) #34	HMGB1 (ENSOARG00020009396) #37	ALOX5AP (ENSOARG00020009284)	MEDAG (ENSOARG00020009224)	TEX26 (ENSOARG00020009149)	ENSOARG00020008926	HSPH1 (ENSOARG00020008491)	B3GLCT (ENSOARG00020008264)	ENSOARG00020008205
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Equus	ANCESTRAL SPECIES	26	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Donkey	MODERN SPECIES	29	GPR12 (ENSEASG00005035884) #7	USP12 (ENSEASG00005022511) #8	ENSEASG00005022501 ##9	RASL11A (ENSEASG00005034471) #10	ENSEASG00005022495 #11	MTIF3 (ENSEASG00005022492) #12	LNX2 (ENSEASG00005022490) #13	POLR1D (ENSEASG00005022487) #14	ENSEASG00005035501	GSX1 (ENSEASG00005022483) #15	PDX1 (ENSEASG00005022482) #16	CDX2 (ENSEASG00005022479) #18	ENSEASG00005028208	ENSEASG00005003450	FLT3 (ENSEASG00005022471) #20	PAN3 (ENSEASG00005022467) #22	ENSEASG00005029804	ENSEASG00005022461 #23	ENSEASG00005029421 #26	SLC46A3 (ENSEASG00005022457) #27	MTUS2 (ENSEASG00005022449) #29	SLC7A1 (ENSEASG00005022432) #31	UBL3 (ENSEASG00005022423) #33	KATNAL1 (ENSEASG00005022416) #34	HMGB1 (ENSEASG00005032345) #37	USPL1 (ENSEASG00005022400)	ALOX5AP (ENSEASG00005022395)	MEDAG (ENSEASG00005022391)	TEX26 (ENSEASG00005022387)	ENSEASG00005022381	HSPH1 (ENSEASG00005022374)
Horse	MODERN SPECIES	8	WASF3 (ENSECAG00000000050)	GPR12 (ENSECAG00000059623) #7	ENSECAG00000036907	ENSECAG00000045376	USP12 (ENSECAG00000006779) #8	RASL11A (ENSECAG00000012858) #10	GTF3A (ENSECAG00000014803) #11	MTIF3 (ENSECAG00000016697) #12	LNX2 (ENSECAG00000017219) #13	ENSECAG00000021095	GSX1 (ENSECAG00000035168) #15	PDX1 (ENSECAG00000000679) #16	CDX2 (ENSECAG00000027754) #18	ENSECAG00000002049	FLT3 (ENSECAG00000002171) #20	PAN3 (ENSECAG00000014810) #22	FLT1 (ENSECAG00000021700)	ENSECAG00000049171 #23	POMP (ENSECAG00000011951) #26	ENSECAG00000048907	SLC46A3 (ENSECAG00000011432) #27	MTUS2 (ENSECAG00000013935) #29	SLC7A1 (ENSECAG00000015413) #31	UBL3 (ENSECAG00000001318) #33	KATNAL1 (ENSECAG00000004830) #34	HMGB1 (ENSECAG00000008439) ##37	USPL1 (ENSECAG00000011889)	ALOX5AP (ENSECAG00000012371)	MEDAG (ENSECAG00000014702)	TEX26 (ENSECAG00000015300)	ENSECAG00000016853
Chiroptera	ANCESTRAL SPECIES	66	ENSGT00940000157104.m.a	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Megabat	MODERN SPECIES	1410																PAN3 (ENSPVAG00000001113) #22	FLT1 (ENSPVAG00000001114) #23
Microchiroptera	ANCESTRAL SPECIES	46	ENSGT00940000157104.m.a	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b.f ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Greater horseshoe bat	MODERN SPECIES	22	ENSRFEG00010003754	GPR12 (ENSRFEG00010003761) #7	USP12 (ENSRFEG00010003775) #8	ENSRFEG00010003789 ##9	RASL11A (ENSRFEG00010003821) #10	GTF3A (ENSRFEG00010003845) #11	MTIF3 (ENSRFEG00010003873) #12	LNX2 (ENSRFEG00010003884) #13	ENSRFEG00010003922 #14	ENSRFEG00010003942	GSX1 (ENSRFEG00010003946) #15	PDX1 (ENSRFEG00010003956) #16	CDX2 (ENSRFEG00010003965) #18	ENSRFEG00010003975	FLT3 (ENSRFEG00010004003) #20	PAN3 (ENSRFEG00010004077) #22	FLT1 (ENSRFEG00010004193) #23	ENSRFEG00010004318 #26	SLC46A3 (ENSRFEG00010004332) #27	MTUS2 (ENSRFEG00010004361) #29	ENSRFEG00010004420 ##37	SLC7A1 (ENSRFEG00010000293) #31	UBL3 (ENSRFEG00010000414) #33	KATNAL1 (ENSRFEG00010000476) #34	HMGB1 (ENSRFEG00010000531) #37	USPL1 (ENSRFEG00010000567)	ALOX5AP (ENSRFEG00010000601)	MEDAG (ENSRFEG00010000622)	TEX26 (ENSRFEG00010000643)	HSPH1 (ENSRFEG00010000709)	B3GLCT (ENSRFEG00010000860)
Microbat	MODERN SPECIES	1164				GPR12 (ENSMLUG00000002365) #7	USP12 (ENSMLUG00000007510) #8	ENSMLUG00000010093 ##9	RASL11A (ENSMLUG00000016335) #10	GTF3A (ENSMLUG00000002158) #11	MTIF3 (ENSMLUG00000002161) #12	LNX2 (ENSMLUG00000010946) #13	ENSMLUG00000025151	PDX1 (ENSMLUG00000010639) #16	CDX2 (ENSMLUG00000002563) #18	ENSMLUG00000002576	FLT3 (ENSMLUG00000002582) #20	PAN3 (ENSMLUG00000004348) #22	FLT1 (ENSMLUG00000004358) #23	ENSMLUG00000010322 #26	SLC46A3 (ENSMLUG00000006699) #27
Carnivora	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967
Felidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Panthera	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00950000182922.a.a.a.b.a.a.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00950000182922.a.a.a.b.a.a.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
leopard	MODERN SPECIES	14	CDK8 (ENSPPRG00000023432)	WASF3 (ENSPPRG00000022988)	GPR12 (ENSPPRG00000017596) #7	USP12 (ENSPPRG00000000510) #8	ENSPPRG00000001012 ##9	RASL11A (ENSPPRG00000001350) #10	GTF3A (ENSPPRG00000002368) #11	MTIF3 (ENSPPRG00000002497) #12	LNX2 (ENSPPRG00000002783) #13	POLR1D (ENSPPRG00000003381) #14	GSX1 (ENSPPRG00000004333) #15	PDX1 (ENSPPRG00000004534) #16	CDX2 (ENSPPRG00000004823) #18	ENSPPRG00000005097	FLT3 (ENSPPRG00000005326) #20	PAN3 (ENSPPRG00000008505) #22	ENSPPRG00000011363	ENSPPRG00000013104 #23	POMP (ENSPPRG00000013840) #26	SLC46A3 (ENSPPRG00000015693) #27	ENSPPRG00000016401 #29	SLC7A1 (ENSPPRG00000017628) #31	UBL3 (ENSPPRG00000019662) #33	KATNAL1 (ENSPPRG00000022045) #34	HMGB1 (ENSPPRG00000022869) #37	USPL1 (ENSPPRG00000000053)	ALOX5AP (ENSPPRG00000000293)	MEDAG (ENSPPRG00000000734)	TEX26 (ENSPPRG00000001047)	ENSPPRG00000002151	HSPH1 (ENSPPRG00000005057)
lion	MODERN SPECIES	1	CDK8 (ENSPLOG00000004108)	WASF3 (ENSPLOG00000004088)	GPR12 (ENSPLOG00000004075) #7	USP12 (ENSPLOG00000004064) #8	ENSPLOG00000021394 #9	RASL11A (ENSPLOG00000021369) #10	GTF3A (ENSPLOG00000021339) #11	MTIF3 (ENSPLOG00000021318) #12	LNX2 (ENSPLOG00000021288) #13	ENSPLOG00000021249	GSX1 (ENSPLOG00000021227) #15	PDX1 (ENSPLOG00000021216) #16	CDX2 (ENSPLOG00000021193) #18	URAD (ENSPLOG00000021175) #19	FLT3 (ENSPLOG00000021081) #20	PAN3 (ENSPLOG00000020895) #22	FLT1 (ENSPLOG00000020410) #23	POMP (ENSPLOG00000020240) #26	SLC46A3 (ENSPLOG00000020203) #27	ENSPLOG00000020066 #29	SLC7A1 (ENSPLOG00000020023) #31	UBL3 (ENSPLOG00000019992) #33	KATNAL1 (ENSPLOG00000019942) #34	ENSPLOG00000019888 ##37	USPL1 (ENSPLOG00000019841)	ALOX5AP (ENSPLOG00000019807)	MEDAG (ENSPLOG00000019748)	TEX26 (ENSPLOG00000019557)	ENSPLOG00000019458	HSPH1 (ENSPLOG00000019185)	B3GLCT (ENSPLOG00000019047)
Tiger	MODERN SPECIES	38	CDK8 (ENSPTIG00000021301)	WASF3 (ENSPTIG00000020649)	GPR12 (ENSPTIG00000005107) #7	USP12 (ENSPTIG00000020368) #8	ENSPTIG00000020228 ##9	RASL11A (ENSPTIG00000019926) #10	GTF3A (ENSPTIG00000018958) #11	MTIF3 (ENSPTIG00000018642) #12	LNX2 (ENSPTIG00000018500) #13	POLR1D (ENSPTIG00000018137) #14	ENSPTIG00000017320	GSX1 (ENSPTIG00000016369) #15	ENSPTIG00000016324	ENSPTIG00000014998 #18	FLT3 (ENSPTIG00000013522) #20	PAN3 (ENSPTIG00000011675) #22	ENSPTIG00000010147	ENSPTIG00000007575 #23	POMP (ENSPTIG00000007181) #26	SLC46A3 (ENSPTIG00000005724) #27	ENSPTIG00000001385 #29	SLC7A1 (ENSPTIG00000021015) #31	UBL3 (ENSPTIG00000020762) #33	KATNAL1 (ENSPTIG00000020391) #34	ENSPTIG00000020002 ##37	USPL1 (ENSPTIG00000019771)	ALOX5AP (ENSPTIG00000019272)	MEDAG (ENSPTIG00000018319)	TEX26 (ENSPTIG00000017363)	ENSPTIG00000016067	HSPH1 (ENSPTIG00000013145)
Cat	MODERN SPECIES		CDK8 (ENSFCAG00000027073)	WASF3 (ENSFCAG00000009474)	GPR12 (ENSFCAG00000014524) #7	USP12 (ENSFCAG00000026620) #8	ENSFCAG00000006750 ##9	RASL11A (ENSFCAG00000006749) #10	GTF3A (ENSFCAG00000006982) #11	MTIF3 (ENSFCAG00000006985) #12	LNX2 (ENSFCAG00000011821) #13	ENSFCAG00000030162	GSX1 (ENSFCAG00000026793) #15	PDX1 (ENSFCAG00000034557) #16	CDX2 (ENSFCAG00000026699) #18	ENSFCAG00000036126	FLT3 (ENSFCAG00000004539) #20	PAN3 (ENSFCAG00000018643) #22	FLT1 (ENSFCAG00000013299) #23	POMP (ENSFCAG00000008235) #26	SLC46A3 (ENSFCAG00000008236) #27	MTUS2 (ENSFCAG00000014322) #29	SLC7A1 (ENSFCAG00000014326) #31	UBL3 (ENSFCAG00000027217) #33	KATNAL1 (ENSFCAG00000032001) #34	HMGB1 (ENSFCAG00000000200) #37	USPL1 (ENSFCAG00000022053)	ALOX5AP (ENSFCAG00000037195)	MEDAG (ENSFCAG00000007544)	TEX26 (ENSFCAG00000024146)	ENSFCAG00000031325	HSPH1 (ENSFCAG00000007547)	B3GLCT (ENSFCAG00000018185)
Caniformia	ANCESTRAL SPECIES	24	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967
Canidae	ANCESTRAL SPECIES	31	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000153229.A.b #19	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.a.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00940000153425.a.a.b.a	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00390000011067.A.ib.b	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.a.b.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00940000153425.a.a.b.a	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967
Dog	MODERN SPECIES	17	GPR12 (ENSCAFG00845026068) #7	ENSCAFG00845026031	USP12 (ENSCAFG00845025960) #8	RPL21 (ENSCAFG00845025858) ##9	RASL11A (ENSCAFG00845025821) #10	GTF3A (ENSCAFG00845025723) #11	MTIF3 (ENSCAFG00845025671) #12	LNX2 (ENSCAFG00845025569) #13	POLR1D (ENSCAFG00845025499)	GSX1 (ENSCAFG00845025440) #15	PDX1 (ENSCAFG00845025401) #16	CDX2 (ENSCAFG00845025357) #18	ENSCAFG00845025288	ENSCAFG00845025235	FLT3 (ENSCAFG00845024412) #20	PAN3 (ENSCAFG00845023866) #22	FLT1 (ENSCAFG00845023188) #23	POMP (ENSCAFG00845022887) #26	SLC46A3 (ENSCAFG00845022832) #27	MTUS2 (ENSCAFG00845022435) #29	SLC7A1 (ENSCAFG00845022314) #31	ENSCAFG00845022280	UBL3 (ENSCAFG00845022214) #33	ENSCAFG00845022193	KATNAL1 (ENSCAFG00845022093) #34	HMGB1 (ENSCAFG00845021967) #37	USPL1 (ENSCAFG00845021869)	ALOX5AP (ENSCAFG00845021804)	MEDAG (ENSCAFG00845021735)	TEX26 (ENSCAFG00845021671)	ENSCAFG00845021368
Dingo	MODERN SPECIES	304	USP12 (ENSCAFG00020025315) #8	ENSCAFG00020025313 ##9	RASL11A (ENSCAFG00020025312) #10	ENSCAFG00020025311	ENSCAFG00020025308 #11	ENSCAFG00020025306 #11	MTIF3 (ENSCAFG00020025304) #12	LNX2 (ENSCAFG00020025302) #13	ENSCAFG00020025301 #14	GSX1 (ENSCAFG00020025299) #15	PDX1 (ENSCAFG00020025298) #16	CDX2 (ENSCAFG00020025296) #18	ENSCAFG00020025291	ENSCAFG00020025290	FLT3 (ENSCAFG00020025240) #20	PAN3 (ENSCAFG00020025181) #22	ENSCAFG00020025175	ENSCAFG00020025171 #23	ENSCAFG00020025170	ENSCAFG00020025169	SLC46A3 (ENSCAFG00020025168) #27	MTUS2 (ENSCAFG00020025161) #29	SLC7A1 (ENSCAFG00020025151) #31	ENSCAFG00020025149	UBL3 (ENSCAFG00020025147) #33	ENSCAFG00020025145	KATNAL1 (ENSCAFG00020025138) #34	ENSCAFG00020025137	ENSCAFG00020025133	ENSCAFG00020025123 ##37	USPL1 (ENSCAFG00020025117)
Red fox	MODERN SPECIES	22	GPR12 (ENSVVUG00000009138) #7	USP12 (ENSVVUG00000009179) #8	RPL21 (ENSVVUG00000009183) ##9	RASL11A (ENSVVUG00000009191) #10	GTF3A (ENSVVUG00000009197) #11	MTIF3 (ENSVVUG00000009207) #12	LNX2 (ENSVVUG00000009209) #13	POLR1D (ENSVVUG00000009216) #14	ENSVVUG00000009220	GSX1 (ENSVVUG00000009230) #15	ENSVVUG00000009233	PDX1 (ENSVVUG00000009234) #16	CDX2 (ENSVVUG00000009237) #18	FLT3 (ENSVVUG00000009247) #20	ENSVVUG00000009307 #19	PAN3 (ENSVVUG00000009313) #22	FLT1 (ENSVVUG00000009356) #23	POMP (ENSVVUG00000009398) #26	SLC46A3 (ENSVVUG00000009403) #27	MTUS2 (ENSVVUG00000009413) #29	SLC7A1 (ENSVVUG00000009439) #31	ENSVVUG00000009450	UBL3 (ENSVVUG00000009455) #33	KATNAL1 (ENSVVUG00000009499) #34	HMGB1 (ENSVVUG00000009534) #37	USPL1 (ENSVVUG00000009708)	ALOX5AP (ENSVVUG00000009718)	MEDAG (ENSVVUG00000009731)	TEX26 (ENSVVUG00000009744)	ENSVVUG00000009779	HSPH1 (ENSVVUG00000010061)
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.a.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967
Mustelinae	ANCESTRAL SPECIES	109										ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967	ENSGT00940000159635
American mink	MODERN SPECIES	346										ENSNVIG00000002786	GSX1 (ENSNVIG00000002846) #15	PDX1 (ENSNVIG00000002855) #16	CDX2 (ENSNVIG00000002864) #18	URAD (ENSNVIG00000002869) #19	FLT3 (ENSNVIG00000002880) #20	PAN3 (ENSNVIG00000002913) #22	FLT1 (ENSNVIG00000002982) #23	ENSNVIG00000003156 #26	S46A3 (ENSNVIG00000003179) #27
Ferret	MODERN SPECIES	364										ENSMPUG00000005164	GSX1 (ENSMPUG00000005153) #15	PDX1 (ENSMPUG00000005147) #16	CDX2 (ENSMPUG00000005092) #18	ENSMPUG00000005088	FLT3 (ENSMPUG00000005073) #20	PAN3 (ENSMPUG00000004987) #22	FLT1 (ENSMPUG00000004699) #23	POMP (ENSMPUG00000004690) #26	SLC46A3 (ENSMPUG00000004680) #27	ENSMPUG00000004676	MTUS2 (ENSMPUG00000004661) #29	SLC7A1 (ENSMPUG00000004649) #31	UBL3 (ENSMPUG00000004638) #33	ENSMPUG00000004620	KATNAL1 (ENSMPUG00000004610) #34	HMGB1 (ENSMPUG00000004579) #37	USPL1 (ENSMPUG00000004564)	ALOX5AP (ENSMPUG00000004556)	MEDAG (ENSMPUG00000004549)	TEX26 (ENSMPUG00000004539)	ENSMPUG00000004527
Ursidae	ANCESTRAL SPECIES	27	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.a.b #9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635
Giant Panda	MODERN SPECIES	17	GPR12 (ENSAMEG00000019402) #7	ENSAMEG00000024690	USP12 (ENSAMEG00000001863) #8	RPL21 (ENSAMEG00000031074) #9	RASL11A (ENSAMEG00000015812) #10	ENSAMEG00000029656	GTF3A (ENSAMEG00000015824) #11	MTIF3 (ENSAMEG00000015841) #12	LNX2 (ENSAMEG00000015845) #13	ENSAMEG00000028974	GSX1 (ENSAMEG00000030161) #15	PDX1 (ENSAMEG00000025378) #16	CDX2 (ENSAMEG00000029013) #18	ENSAMEG00000031229	FLT3 (ENSAMEG00000002354) #20	PAN3 (ENSAMEG00000002349) #22	FLT1 (ENSAMEG00000002209) #23	ENSAMEG00000008961 #26	SLC46A3 (ENSAMEG00000008953) #27	MTUS2 (ENSAMEG00000008934) #29	SLC7A1 (ENSAMEG00000008899) #31	UBL3 (ENSAMEG00000008894) #33	ENSAMEG00000008885 #34	ENSAMEG00000008873	ALOX5AP (ENSAMEG00000023710)	MEDAG (ENSAMEG00000008847)	TEX26 (ENSAMEG00000008839)	ENSAMEG00000008833	HSPH1 (ENSAMEG00000008784)	B3GLCT (ENSAMEG00000008757)	RXFP2 (ENSAMEG00000008702)
Ursus	ANCESTRAL SPECIES	57	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.a.b.a.b.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00940000159635	ENSGT00940000155499
American black bear	MODERN SPECIES	664																ENSUAMG00000023233 #22	FLT1 (ENSUAMG00000023232) #23
Polar bear	MODERN SPECIES	177	CDK8 (ENSUMAG00000016849)	WASF3 (ENSUMAG00000016859)	GPR12 (ENSUMAG00000016877) #7	USP12 (ENSUMAG00000016883) #8	ENSUMAG00000016901	ENSUMAG00000016903	ENSUMAG00000016908 ##9	RASL11A (ENSUMAG00000016927) #10	GTF3A (ENSUMAG00000016941) #11	MTIF3 (ENSUMAG00000016954) #12	LNX2 (ENSUMAG00000016959) #13	POLR1D (ENSUMAG00000016968) #14	ENSUMAG00000016971	ENSUMAG00000016976 #18	FLT3 (ENSUMAG00000016979) #20	PAN3 (ENSUMAG00000016986) #22	ENSUMAG00000017000	ENSUMAG00000017006 #23	POMP (ENSUMAG00000017026) #26	SLC46A3 (ENSUMAG00000017030) #27	ENSUMAG00000017046 #29	SLC7A1 (ENSUMAG00000017056) #31	UBL3 (ENSUMAG00000017145) #33	KATNAL1 (ENSUMAG00000017153) #34	ENSUMAG00000017165 #37	USPL1 (ENSUMAG00000017198)	ENSUMAG00000017201	MEDAG (ENSUMAG00000017210)	TEX26 (ENSUMAG00000017213)	HSPH1 (ENSUMAG00000017368)	B3GLCT (ENSUMAG00000017840)
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484	ENSGT00740000117041	ENSGT00940000162967	ENSGT00940000159635
Afrotheria	ANCESTRAL SPECIES	89	ENSGT00940000165049	ENSGT00940000158530	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000161261 #18	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484
Tenrec	MODERN SPECIES	597																ENSETEG00000019591 #22
Afrotheria_a	ANCESTRAL SPECIES	90	ENSGT00940000165049	ENSGT00940000158530	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00950000182922.a.a.b ##9	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00390000003643	ENSGT00940000161261 #18	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #26	ENSGT00950000183096.a.a.c.b #27	ENSGT00950000183026.B #29	ENSGT00940000155349 #31	ENSGT00390000004952.b #33	ENSGT00940000156630 #34	ENSGT00950000183120.e.b.a.a.a #37	ENSGT00390000002316	ENSGT00940000158706	ENSGT00390000018451	ENSGT00390000009484
Hyrax	MODERN SPECIES	3887																PAN3 (ENSPCAG00000001143) #22
Elephant	MODERN SPECIES	294	RNF6 (ENSLAFG00000029161)	CDK8 (ENSLAFG00000006771)	WASF3 (ENSLAFG00000018395)	GPR12 (ENSLAFG00000014464) #7	ENSLAFG00000028761	USP12 (ENSLAFG00000007202) #8	ENSLAFG00000003677 ##9	RASL11A (ENSLAFG00000003673) #10	GTF3A (ENSLAFG00000027315) #11	MTIF3 (ENSLAFG00000015496) #12	LNX2 (ENSLAFG00000015044) #13	POLR1D (ENSLAFG00000032290) #14	ENSLAFG00000022071	CDX2 (ENSLAFG00000030146) #18	FLT3 (ENSLAFG00000015599) #20	PAN3 (ENSLAFG00000015614) #22	FLT1 (ENSLAFG00000015622) #23	POMP (ENSLAFG00000003665) #26	SLC46A3 (ENSLAFG00000009925) #27	ENSLAFG00000016168 #29	SLC7A1 (ENSLAFG00000016186) #31	UBL3 (ENSLAFG00000000781) #33	KATNAL1 (ENSLAFG00000003140) #34	HMGB1 (ENSLAFG00000000269) #37	USPL1 (ENSLAFG00000007634)	ALOX5AP (ENSLAFG00000018481)	MEDAG (ENSLAFG00000018412)	TEX26 (ENSLAFG00000025765)	UBAC2 (ENSLAFG00000007662)	GPR18 (ENSLAFG00000007667)	GPR183 (ENSLAFG00000022160)
Xenarthra	ANCESTRAL SPECIES	208			ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a #7	ENSGT00940000153284.a #8	ENSGT00940000161208 #10	ENSGT00940000155647 #11	ENSGT00390000014424 #12	ENSGT00940000158381 #13	ENSGT00550000075160 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #18	ENSGT00390000002395	ENSGT00940000160575 #20	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00970000194118
Sloth	MODERN SPECIES	4232																PAN3 (ENSCHOG00000011265) #22
Armadillo	MODERN SPECIES	1567	WASF3 (ENSDNOG00000002618)	GPR12 (ENSDNOG00000017683) #7	ENSDNOG00000043479 #8	RASL11A (ENSDNOG00000010166) #10	ENSDNOG00000041047	ENSDNOG00000037405 #11	MTIF3 (ENSDNOG00000037641) #12	LNX2 (ENSDNOG00000006927) #13	ENSDNOG00000043676 #14	ENSDNOG00000044869	GSX1 (ENSDNOG00000011821) #15	PDX1 (ENSDNOG00000003213) #16	CDX2 (ENSDNOG00000035260) #18	ENSDNOG00000046210	FLT3 (ENSDNOG00000001582) #20	PAN3 (ENSDNOG00000017391) #22	ENSDNOG00000031252	ENSDNOG00000036523	SLC46A3 (ENSDNOG00000000330) #27	ENSDNOG00000031980