Theria	ANCESTRAL SPECIES		ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000153661.b	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01030000234550.a.a.d.a.a
Eutheria	ANCESTRAL SPECIES	1	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Glires	ANCESTRAL SPECIES	18	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Rodentia	ANCESTRAL SPECIES	12	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Muroidea	ANCESTRAL SPECIES	8	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Prairie vole	MODERN SPECIES	350	Mdfic (ENSMOCG00000014159) #7	ENSMOCG00000018404 #8	ENSMOCG00000002194 #9	Tfec (ENSMOCG00000021582) #10	ENSMOCG00000011236 #11	Cav2 (ENSMOCG00000015582) #12	Cav1 (ENSMOCG00000019224) #13	Met (ENSMOCG00000006344) #14	Capza2 (ENSMOCG00000017352) #15	St7 (ENSMOCG00000016312) #16	Wnt2 (ENSMOCG00000022808) #17	Asz1 (ENSMOCG00000001767) #18	Cftr (ENSMOCG00000007371) #19	Cttnbp2 (ENSMOCG00000010478) #20	ENSMOCG00000018450 #21	Lsm8 (ENSMOCG00000001688) #22	Kcnd2 (ENSMOCG00000022409) #23	Tspan12 (ENSMOCG00000018964) #24	Ing3 (ENSMOCG00000015011) #25	Cped1 (ENSMOCG00000013716) #26	Wnt16 (ENSMOCG00000021643) #27	Fam3c (ENSMOCG00000005307) #28	Ptprz1 (ENSMOCG00000007634) #29	Aass (ENSMOCG00000015947) #30	Usp26 (ENSMOCG00000011350) #31	Hs6st2 (ENSMOCG00000014810) #32	Mbnl3 (ENSMOCG00000011470) #33	Rap2c (ENSMOCG00000007198) #34	Frmd7 (ENSMOCG00000017123) #35	Stk26 (ENSMOCG00000012674) #36
Northern American deer mouse	MODERN SPECIES	16	Ppp1r3a (ENSPEMG00000011327)	Foxp2 (ENSPEMG00000017097)	Mdfic (ENSPEMG00000000955) #7	Tfec (ENSPEMG00000016053) #10	ENSPEMG00000002837 #11	ENSPEMG00000011977	Cav2 (ENSPEMG00000024329) #12	Cav1 (ENSPEMG00000024904) #13	Met (ENSPEMG00000021204) #14	Capza2 (ENSPEMG00000023836) #15	St7 (ENSPEMG00000006510) #16	Wnt2 (ENSPEMG00000024059) #17	Asz1 (ENSPEMG00000005011) #18	Cftr (ENSPEMG00000008730) #19	Cttnbp2 (ENSPEMG00000006365) #20	Lsm8 (ENSPEMG00000009153) #22	Ankrd7 (ENSPEMG00000015569)	ENSPEMG00000026145	ENSPEMG00000025502	ENSPEMG00000025522	ENSPEMG00000027299	Kcnd2 (ENSPEMG00000012871) #23	Tspan12 (ENSPEMG00000016235) #24	Ing3 (ENSPEMG00000021561) #25	Cped1 (ENSPEMG00000024278) #26	Wnt16 (ENSPEMG00000024607) #27	ENSPEMG00000022248 #28	Ptprz1 (ENSPEMG00000014955) #29	Aass (ENSPEMG00000008591) #30	Fezf1 (ENSPEMG00000010541)	Cadps2 (ENSPEMG00000018807)
Cricetinae	ANCESTRAL SPECIES	23	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Chinese hamster chok1gshd	MODERN SPECIES	54	Smim30 (ENSCGRG00001006732)	Ppp1r3a (ENSCGRG00001019903)	Foxp2 (ENSCGRG00001011096)	Mdfic (ENSCGRG00001017688) #7	Tfec (ENSCGRG00001017234) #10	ENSCGRG00001023123 #11	Cav2 (ENSCGRG00001020610) #12	Cav1 (ENSCGRG00001019680) #13	Met (ENSCGRG00001011551) #14	Capza2 (ENSCGRG00001022803) #15	St7 (ENSCGRG00001018752) #16	Wnt2 (ENSCGRG00001005484) #17	Asz1 (ENSCGRG00001020481) #18	Cftr (ENSCGRG00001006106) #19	Cttnbp2 (ENSCGRG00001010648) #20	Lsm8 (ENSCGRG00001000450) #22	Ankrd7 (ENSCGRG00001022051)	ENSCGRG00001021813	ENSCGRG00001021329	Kcnd2 (ENSCGRG00001013210) #23	Tspan12 (ENSCGRG00001012145) #24	Ing3 (ENSCGRG00001012381) #25	Cped1 (ENSCGRG00001009705) #26	Wnt16 (ENSCGRG00001022981) #27	Fam3c (ENSCGRG00001019403) #28	Ptprz1 (ENSCGRG00001020740) #29	Aass (ENSCGRG00001014114) #30	Fezf1 (ENSCGRG00001018145)	Cadps2 (ENSCGRG00001009309)	Rnf133 (ENSCGRG00001011407)	ENSCGRG00001014291
Golden Hamster	DUPLICATION
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	852					Aoah (ENSMAUG00000014042)	Or2p2 (ENSMAUG00000017422)	ENSMAUG00000017480	Or2ad1 (ENSMAUG00000017298)	Trim27 (ENSMAUG00000011588)	ENSMAUG00000012725	Gpx6 (ENSMAUG00000014546)	Zkscan3 (ENSMAUG00000009785)	Zscan26 (ENSMAUG00000016419)	Nkapl (ENSMAUG00000011736)	Zkscan8 (ENSMAUG00000019014)	ENSMAUG00000015356 #22	Or2w6 (ENSMAUG00000017576)	ENSMAUG00000017623	ENSMAUG00000017587	ENSMAUG00000017734	ENSMAUG00000014301	ENSMAUG00000016752	ENSMAUG00000017828	ENSMAUG00000017394	ENSMAUG00000012078	Zfp184 (ENSMAUG00000002652)	ENSMAUG00000014749	Prss16 (ENSMAUG00000018390)	H2ac12 (ENSMAUG00000017934)	ENSMAUG00000017554	ENSMAUG00000017348
Golden Hamster	MODERN SPECIES	706			Gpt2 (ENSMAUG00000017417)	Dnaja2 (ENSMAUG00000013341)	ENSMAUG00000008382	Neto2 (ENSMAUG00000005646)	Itfg1 (ENSMAUG00000011749)	Phkb (ENSMAUG00000016799)	Abcc12 (ENSMAUG00000005078)	ENSMAUG00000001567	ENSMAUG00000017496	Siah1a (ENSMAUG00000001370)	N4bp1 (ENSMAUG00000019066)	Cbln1 (ENSMAUG00000020791)	4933402J07Rik (ENSMAUG00000017355)	ENSMAUG00000015721 #22	ENSMAUG00000019410	Zfp423 (ENSMAUG00000015448)	ENSMAUG00000013750	Cnep1r1 (ENSMAUG00000012481)	Heatr3 (ENSMAUG00000020748)	Tent4b (ENSMAUG00000018042)	Adcy7 (ENSMAUG00000005638)	Brd7 (ENSMAUG00000000695)	Nkd1 (ENSMAUG00000000515)	Snx20 (ENSMAUG00000020254)	Nod2 (ENSMAUG00000004325)	Cyld (ENSMAUG00000001344)	ENSMAUG00000018753	Sall1 (ENSMAUG00000019093)	Tox3 (ENSMAUG00000000550)
Golden Hamster	MODERN SPECIES	696																Lsm8 (ENSMAUG00000020287) #22	Kcnd2 (ENSMAUG00000014403) #23	Tspan12 (ENSMAUG00000013716) #24	Ing3 (ENSMAUG00000001366) #25	Cped1 (ENSMAUG00000012676) #26	Wnt16 (ENSMAUG00000015173) #27	Fam3c (ENSMAUG00000018611) #28	ENSMAUG00000002182	Ptprz1 (ENSMAUG00000013366) #29	Aass (ENSMAUG00000021228) #30	Fezf1 (ENSMAUG00000014725)	Cadps2 (ENSMAUG00000014481)	Rnf148 (ENSMAUG00000002390)	Slc13a1 (ENSMAUG00000021116)	Iqub (ENSMAUG00000010910)	ENSMAUG00000008323
Murinae	ANCESTRAL SPECIES	4	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993.c #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Rat	MODERN SPECIES	14	Mdfic (ENSRNOG00000053787) #7	RGD1562178 (ENSRNOG00000052702)	Tfec (ENSRNOG00000061595) #10	Tes (ENSRNOG00000051952) #11	Cav2 (ENSRNOG00000057713) #12	Cav1 (ENSRNOG00000056836) #13	Met (ENSRNOG00000052745) #14	Capza2 (ENSRNOG00000056207) #15	ST7 (ENSRNOG00000056243) #16	AC123138.1 (ENSRNOG00000012822)	Wnt2 (ENSRNOG00000051905) #17	Asz1 (ENSRNOG00000060343) #18	ENSRNOG00000067965	Cftr (ENSRNOG00000055103) #19	Cttnbp2 (ENSRNOG00000061845) #20	Lsm8 (ENSRNOG00000070946) #22	Ankrd7 (ENSRNOG00000055481)	LOC685171 (ENSRNOG00000058543)	Kcnd2 (ENSRNOG00000067416) #23	Tspan12 (ENSRNOG00000059016) #24	ENSRNOG00000064820	Ing3 (ENSRNOG00000005496) #25	Cped1 (ENSRNOG00000021840) #26	Wnt16 (ENSRNOG00000005781) #27	Fam3c (ENSRNOG00000060349) #28	ENSRNOG00000063098	Ptprz1 (ENSRNOG00000006030) #29	Aass (ENSRNOG00000039494) #30	AABR07025928.1 (ENSRNOG00000056660)	ENSRNOG00000068406	Fezf1 (ENSRNOG00000007608)
Mus	ANCESTRAL SPECIES	20	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993.c #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Shrew mouse	MODERN SPECIES	11	Smim30 (MGP_PahariEiJ_G0021866)	Ppp1r3a (MGP_PahariEiJ_G0021867)	Foxp2 (MGP_PahariEiJ_G0021868)	MGP_PahariEiJ_G0021869 #7	Tfec (MGP_PahariEiJ_G0021870) #10	Tes (MGP_PahariEiJ_G0021871) #11	Cav2 (MGP_PahariEiJ_G0021872) #12	Cav1 (MGP_PahariEiJ_G0021873) #13	Met (MGP_PahariEiJ_G0021874) #14	Capza2 (MGP_PahariEiJ_G0021875) #15	St7 (MGP_PahariEiJ_G0021876) #16	Wnt2 (MGP_PahariEiJ_G0021877) #17	Asz1 (MGP_PahariEiJ_G0021878) #18	Cftr (MGP_PahariEiJ_G0021879) #19	Cttnbp2 (MGP_PahariEiJ_G0021880) #20	MGP_PahariEiJ_G0021881 #22	Ankrd7 (MGP_PahariEiJ_G0021882)	Kcnd2 (MGP_PahariEiJ_G0021883) #23	Tspan12 (MGP_PahariEiJ_G0021884) #24	Ing3 (MGP_PahariEiJ_G0021885) #25	Cped1 (MGP_PahariEiJ_G0021886) #26	Wnt16 (MGP_PahariEiJ_G0021887) #27	Fam3c (MGP_PahariEiJ_G0021888) #28	Ptprz1 (MGP_PahariEiJ_G0021889) #29	Aass (MGP_PahariEiJ_G0021890) #30	Fezf1 (MGP_PahariEiJ_G0021891)	Cadps2 (MGP_PahariEiJ_G0021892)	Rnf133 (MGP_PahariEiJ_G0021893)	Rnf148 (MGP_PahariEiJ_G0021894)	Tas2r118 (MGP_PahariEiJ_G0021895)	Slc13a1 (MGP_PahariEiJ_G0021896)
Mus_A	ANCESTRAL SPECIES	7	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993.c #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Ryukyu mouse	MODERN SPECIES	15	Smim30 (MGP_CAROLIEiJ_G0028110)	Ppp1r3a (MGP_CAROLIEiJ_G0028111)	Foxp2 (MGP_CAROLIEiJ_G0028112)	MGP_CAROLIEiJ_G0028113 #7	Tfec (MGP_CAROLIEiJ_G0028114) #10	Tes (MGP_CAROLIEiJ_G0028115) #11	Cav2 (MGP_CAROLIEiJ_G0028116) #12	Cav1 (MGP_CAROLIEiJ_G0028117) #13	Met (MGP_CAROLIEiJ_G0028118) #14	Capza2 (MGP_CAROLIEiJ_G0028119) #15	St7 (MGP_CAROLIEiJ_G0028120) #16	Wnt2 (MGP_CAROLIEiJ_G0028121) #17	Asz1 (MGP_CAROLIEiJ_G0028122) #18	Cftr (MGP_CAROLIEiJ_G0028123) #19	Cttnbp2 (MGP_CAROLIEiJ_G0028124) #20	Lsm8 (MGP_CAROLIEiJ_G0028125) #22	Ankrd7 (MGP_CAROLIEiJ_G0028126)	Kcnd2 (MGP_CAROLIEiJ_G0028127) #23	Tspan12 (MGP_CAROLIEiJ_G0028128) #24	Ing3 (MGP_CAROLIEiJ_G0028129) #25	Cped1 (MGP_CAROLIEiJ_G0028130) #26	Wnt16 (MGP_CAROLIEiJ_G0028131) #27	Fam3c (MGP_CAROLIEiJ_G0028132) #28	Ptprz1 (MGP_CAROLIEiJ_G0028133) #29	Aass (MGP_CAROLIEiJ_G0028134) #30	Fezf1 (MGP_CAROLIEiJ_G0028135)	Cadps2 (MGP_CAROLIEiJ_G0028136)	Rnf133 (MGP_CAROLIEiJ_G0028137)	Rnf148 (MGP_CAROLIEiJ_G0028138)	Tas2r118 (MGP_CAROLIEiJ_G0028139)	Slc13a1 (MGP_CAROLIEiJ_G0028140)
Mus_B	ANCESTRAL SPECIES	20	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993.c #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Mouse	MODERN SPECIES	15	Smim30 (ENSMUSG00000052419)	Ppp1r3a (ENSMUSG00000042717)	Foxp2 (ENSMUSG00000029563)	Mdfic (ENSMUSG00000041390) #7	Tfec (ENSMUSG00000029553) #10	Tes (ENSMUSG00000029552) #11	Cav2 (ENSMUSG00000000058) #12	Cav1 (ENSMUSG00000007655) #13	Met (ENSMUSG00000009376) #14	Capza2 (ENSMUSG00000015733) #15	St7 (ENSMUSG00000029534) #16	Wnt2 (ENSMUSG00000010797) #17	Asz1 (ENSMUSG00000010796) #18	Cftr (ENSMUSG00000041301) #19	Cttnbp2 (ENSMUSG00000000416) #20	Lsm8 (ENSMUSG00000044155) #22	Ankrd7 (ENSMUSG00000029517)	Kcnd2 (ENSMUSG00000060882) #23	Tspan12 (ENSMUSG00000029669) #24	Ing3 (ENSMUSG00000029670) #25	Cped1 (ENSMUSG00000062980) #26	Wnt16 (ENSMUSG00000029671) #27	Fam3c (ENSMUSG00000029672) #28	Ptprz1 (ENSMUSG00000068748) #29	Aass (ENSMUSG00000029695) #30	Fezf1 (ENSMUSG00000029697)	Cadps2 (ENSMUSG00000017978)	Rnf133 (ENSMUSG00000051956)	Rnf148 (ENSMUSG00000078179)	Tas2r118 (ENSMUSG00000043865)	Slc13a1 (ENSMUSG00000029700)
Mus_C	ANCESTRAL SPECIES	19	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993.c #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Steppe mouse	MODERN SPECIES	3300														Cttnbp2 (ENSMSIG00000019587) #20	ENSMSIG00000019569	ENSMSIG00000019550 #22	Ankrd7 (ENSMSIG00000019528)	ENSMSIG00000019517	ENSMSIG00000019508	ENSMSIG00000019486	ENSMSIG00000019470	Kcnd2 (ENSMSIG00000019456) #23	Tspan12 (ENSMSIG00000019433) #24	Ing3 (ENSMSIG00000019386) #25	Cped1 (ENSMSIG00000019364) #26	Wnt16 (ENSMSIG00000019307) #27	Fam3c (ENSMSIG00000019205) #28	ENSMSIG00000019192	Ptprz1 (ENSMSIG00000018983) #29
spretus	MODERN SPECIES	15	Smim30 (MGP_SPRETEiJ_G0029110)	Ppp1r3a (MGP_SPRETEiJ_G0029111)	Foxp2 (MGP_SPRETEiJ_G0029112)	MGP_SPRETEiJ_G0029113 #7	Tfec (MGP_SPRETEiJ_G0029114) #10	Tes (MGP_SPRETEiJ_G0029115) #11	Cav2 (MGP_SPRETEiJ_G0029116) #12	Cav1 (MGP_SPRETEiJ_G0029117) #13	Met (MGP_SPRETEiJ_G0029118) #14	Capza2 (MGP_SPRETEiJ_G0029119) #15	St7 (MGP_SPRETEiJ_G0029120) #16	Wnt2 (MGP_SPRETEiJ_G0029121) #17	Asz1 (MGP_SPRETEiJ_G0029122) #18	Cftr (MGP_SPRETEiJ_G0029123) #19	Cttnbp2 (MGP_SPRETEiJ_G0029124) #20	Lsm8 (MGP_SPRETEiJ_G0029125) #22	Ankrd7 (MGP_SPRETEiJ_G0029126)	Kcnd2 (MGP_SPRETEiJ_G0029127) #23	Tspan12 (MGP_SPRETEiJ_G0029128) #24	Ing3 (MGP_SPRETEiJ_G0029129) #25	Cped1 (MGP_SPRETEiJ_G0029130) #26	Wnt16 (MGP_SPRETEiJ_G0029131) #27	Fam3c (MGP_SPRETEiJ_G0029132) #28	Ptprz1 (MGP_SPRETEiJ_G0029133) #29	Aass (MGP_SPRETEiJ_G0029134) #30	Fezf1 (MGP_SPRETEiJ_G0029135)	Cadps2 (MGP_SPRETEiJ_G0029136)	Rnf133 (MGP_SPRETEiJ_G0029137)	Rnf148 (MGP_SPRETEiJ_G0029138)	Tas2r118 (MGP_SPRETEiJ_G0029139)	Slc13a1 (MGP_SPRETEiJ_G0029140)
Upper Galilee mountains blind mole rat	MODERN SPECIES	433				Tfec (ENSNGAG00000014386) #10	ENSNGAG00000019096	ENSNGAG00000016766 #11	Cav2 (ENSNGAG00000015969) #12	Cav1 (ENSNGAG00000019636) #13	Met (ENSNGAG00000014046) #14	Capza2 (ENSNGAG00000001281) #15	St7 (ENSNGAG00000016185) #16	Wnt2 (ENSNGAG00000001319) #17	Asz1 (ENSNGAG00000019679) #18	Cftr (ENSNGAG00000012834) #19	Cttnbp2 (ENSNGAG00000000754) #20	Lsm8 (ENSNGAG00000016554) #22
Lesser Egyptian jerboa	MODERN SPECIES	67	Mdfic (ENSJJAG00000012683) #7	ENSJJAG00000012867	Tfec (ENSJJAG00000015649) #10	ENSJJAG00000019082 #11	Cav2 (ENSJJAG00000020789) #12	Cav1 (ENSJJAG00000021423) #13	ENSJJAG00000000187	Met (ENSJJAG00000012125) #14	ENSJJAG00000021128 #15	St7 (ENSJJAG00000004440) #16	Wnt2 (ENSJJAG00000017203) #17	Asz1 (ENSJJAG00000022495) #18	ENSJJAG00000022583 #19	Cttnbp2 (ENSJJAG00000013148) #20	ENSJJAG00000003447	Lsm8 (ENSJJAG00000009031) #22	ENSJJAG00000011628	ENSJJAG00000016745	ENSJJAG00000019540	Kcnd2 (ENSJJAG00000000160) #23	Tspan12 (ENSJJAG00000006214) #24	Ing3 (ENSJJAG00000007662) #25	Cped1 (ENSJJAG00000023207) #26	ENSJJAG00000013375	Wnt16 (ENSJJAG00000016207) #27	Fam3c (ENSJJAG00000019764) #28	ENSJJAG00000020378	ENSJJAG00000018547	Ptprz1 (ENSJJAG00000014324) #29	Aass (ENSJJAG00000003015) #30	Fezf1 (ENSJJAG00000014803)
Kangaroo rat	MODERN SPECIES	367	Foxp2 (ENSDORG00000007040)	Mdfic (ENSDORG00000001488) #7	Tfec (ENSDORG00000004403) #10	ENSDORG00000029823	ENSDORG00000016725 #11	Cav2 (ENSDORG00000023298) #12	Cav1 (ENSDORG00000026258) #13	Met (ENSDORG00000002178) #14	Capza2 (ENSDORG00000016226) #15	St7 (ENSDORG00000016230) #16	Wnt2 (ENSDORG00000016233) #17	Asz1 (ENSDORG00000007590) #18	Cftr (ENSDORG00000005421) #19	ENSDORG00000023544	Cttnbp2 (ENSDORG00000005026) #20	Lsm8 (ENSDORG00000027868) #22	Ankrd7 (ENSDORG00000002700)	ENSDORG00000028967	Kcnd2 (ENSDORG00000003100) #23	Tspan12 (ENSDORG00000003102) #24	Ing3 (ENSDORG00000014497) #25	Cped1 (ENSDORG00000014498) #26	Wnt16 (ENSDORG00000014501) #27	Fam3c (ENSDORG00000014503) #28	Ptprz1 (ENSDORG00000010123) #29	Aass (ENSDORG00000010129) #30	Fezf1 (ENSDORG00000027250)	Rnf133 (ENSDORG00000025983)	Cadps2 (ENSDORG00000016250)	Slc13a1 (ENSDORG00000000630)	ENSDORG00000030217
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00840000131243	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619.l #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	5	ENSHGLG00000042544	ENSHGLG00000035433	CAV2 (ENSHGLG00000050485) #12	ENSHGLG00000042630 #13	MET (ENSHGLG00000002836) #14	ENSHGLG00000031932	ENSHGLG00000042742 #15	ENSHGLG00000002784 #15	ST7 (ENSHGLG00000002466) #16	ENSHGLG00000003310	WNT2 (ENSHGLG00000036817) #17	ASZ1 (ENSHGLG00000002226) #18	ENSHGLG00000041588	ENSHGLG00000002151 #19	ENSHGLG00000037153	NAA38 (ENSHGLG00000043821) #22	ENSHGLG00000038825	ENSHGLG00000006757	ENSHGLG00000010919	ENSHGLG00000010555 #23	TSPAN12 (ENSHGLG00000009931) #24	ING3 (ENSHGLG00000008632) #25	CPED1 (ENSHGLG00000007984) #26	WNT16 (ENSHGLG00000040512) #27	ENSHGLG00000019063 #28	PTPRZ1 (ENSHGLG00000007675) #29	AASS (ENSHGLG00000006193) #30	FEZF1 (ENSHGLG00000006102)	CADPS2 (ENSHGLG00000017751)	RNF148 (ENSHGLG00000033439)	TAS2R16 (ENSHGLG00000044095)
Naked mole-rat female	MODERN SPECIES	4	COL17A1 (ENSHGLG00000003598)	ENSHGLG00000033849	CFAP43 (ENSHGLG00000035856)	GSTO1 (ENSHGLG00000002485)	GSTO2 (ENSHGLG00000049945)	ITPRIP (ENSHGLG00000046163)	CFAP58 (ENSHGLG00000002793)	SORCS3 (ENSHGLG00000001754)	ENSHGLG00000039825	SORCS1 (ENSHGLG00000002729)	ENSHGLG00000039801	ENSHGLG00000010059	XPNPEP1 (ENSHGLG00000013820)	ENSHGLG00000010854	ENSHGLG00000049850	ENSHGLG00000044804 #22	ENSHGLG00000033270	MXI1 (ENSHGLG00000037614)	SMNDC1 (ENSHGLG00000013390)	DUSP5 (ENSHGLG00000012607)	ENSHGLG00000045441	SMC3 (ENSHGLG00000014422)	ENSHGLG00000036688	RBM20 (ENSHGLG00000013206)	PDCD4 (ENSHGLG00000010690)	BBIP1 (ENSHGLG00000010067)	ENSHGLG00000010758	ADRA2A (ENSHGLG00000043876)	ENSHGLG00000038445	GPAM (ENSHGLG00000011966)	TECTB (ENSHGLG00000012176)
Naked mole-rat female	MODERN SPECIES	11	IL17RE (ENSHGLG00000013446)	IL17RC (ENSHGLG00000010789)	CRELD1 (ENSHGLG00000019547)	ENSHGLG00000018322	EMC3 (ENSHGLG00000018335)	FANCD2 (ENSHGLG00000016165)	FANCD2OS (ENSHGLG00000021223)	ENSHGLG00000035278	ENSHGLG00000007041	SEC13 (ENSHGLG00000016676)	ENSHGLG00000033106	GHRL (ENSHGLG00000016347)	TATDN2 (ENSHGLG00000014225)	ENSHGLG00000014561	ENSHGLG00000039395	ENSHGLG00000019782 #22	ENSHGLG00000048266	ENSHGLG00000050768	TTC6 (ENSHGLG00000000647)	ENSHGLG00000019925	SSTR1 (ENSHGLG00000046762)	ENSHGLG00000033056	ENSHGLG00000003651	ENSHGLG00000003857	ENSHGLG00000047469	ENSHGLG00000045717	ENSHGLG00000004097	ENSHGLG00000004530	ENSHGLG00000004890	ENSHGLG00000005276	ENSHGLG00000005003
Hystricomorpha_a	ANCESTRAL SPECIES	43	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00840000131243	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619.l #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326	ENSGT00390000008099
Hystricomorpha_b	ANCESTRAL SPECIES	62	ENSGT00890000139436.B	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	289							ENSODEG00000000599	ENSODEG00000018600	ENSODEG00000000574	ENSODEG00000000547	ENSODEG00000000513	ISL1 (ENSODEG00000000484)	ENSODEG00000018570	ENSODEG00000000470	ENSODEG00000000441	ENSODEG00000000418 #22
Degu	MODERN SPECIES	525																ENSODEG00000000882 #22
Degu	MODERN SPECIES	139														ENSODEG00000016011	ENSODEG00000020301	ENSODEG00000020290 #22	ENSODEG00000016560	SPATA22 (ENSODEG00000016463)	ASPA (ENSODEG00000017618)	TRPV3 (ENSODEG00000016429)	TRPV1 (ENSODEG00000016421)	SHPK (ENSODEG00000016191)	CTNS (ENSODEG00000016471)	ENSODEG00000016245	EMC6 (ENSODEG00000016227)	P2RX5 (ENSODEG00000016335)	ITGAE (ENSODEG00000016419)	HASPIN (ENSODEG00000016330)	NCBP3 (ENSODEG00000016617)	CAMKK1 (ENSODEG00000016518)	P2RX1 (ENSODEG00000016566)
Long-tailed chinchilla	MODERN SPECIES	139	GPR85 (ENSCLAG00000004007)	SMIM30 (ENSCLAG00000004060)	PPP1R3A (ENSCLAG00000004128)	FOXP2 (ENSCLAG00000004387)	MDFIC (ENSCLAG00000005069) #7	TFEC (ENSCLAG00000005114) #10	TES (ENSCLAG00000005324) #11	CAV1 (ENSCLAG00000005371) #13	MET (ENSCLAG00000005456) #14	CAPZA2 (ENSCLAG00000005899) #15	ST7 (ENSCLAG00000006207) #16	WNT2 (ENSCLAG00000003334) #17	ASZ1 (ENSCLAG00000003377) #18	CFTR (ENSCLAG00000003484) #19	CTTNBP2 (ENSCLAG00000003619) #20	LSM8 (ENSCLAG00000003726) #22
Guinea pig	MODERN SPECIES	11	SMIM30 (ENSCPOG00000033718)	PPP1R3A (ENSCPOG00000012124)	FOXP2 (ENSCPOG00000000938)	MDFIC (ENSCPOG00000034814) #7	TFEC (ENSCPOG00000012369) #10	TES (ENSCPOG00000008823) #11	ENSCPOG00000031628	CAV1 (ENSCPOG00000002524) #13	MET (ENSCPOG00000013525) #14	CAPZA2 (ENSCPOG00000007677) #15	ST7 (ENSCPOG00000015621) #16	WNT2 (ENSCPOG00000033615) #17	ASZ1 (ENSCPOG00000009750) #18	CFTR (ENSCPOG00000012767) #19	CTTNBP2 (ENSCPOG00000004194) #20	LSM8 (ENSCPOG00000035673) #22	KCND2 (ENSCPOG00000011847) #23	TSPAN12 (ENSCPOG00000011851) #24	ING3 (ENSCPOG00000023225) #25	CPED1 (ENSCPOG00000007693) #26	WNT16 (ENSCPOG00000005635) #27	FAM3C (ENSCPOG00000005639) #28	PTPRZ1 (ENSCPOG00000039416) #29	AASS (ENSCPOG00000007522) #30	FEZF1 (ENSCPOG00000013096)	CADPS2 (ENSCPOG00000005875)	RNF133 (ENSCPOG00000035136)	TAS2R16 (ENSCPOG00000007419)	SLC13A1 (ENSCPOG00000006440)	IQUB (ENSCPOG00000006286)	NDUFA5 (ENSCPOG00000030629)
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00940000182222	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	35	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.y #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Marmotini_b	ANCESTRAL SPECIES	193	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.y #22	ENSGT00940000161777.b
Squirrel	MODERN SPECIES	189	SMIM30 (ENSSTOG00000028596)	PPP1R3A (ENSSTOG00000026781)	FOXP2 (ENSSTOG00000008964)	MDFIC (ENSSTOG00000014533) #7	TFEC (ENSSTOG00000001224) #10	TES (ENSSTOG00000025936) #11	CAV2 (ENSSTOG00000021668) #12	CAV1 (ENSSTOG00000029133) #13	MET (ENSSTOG00000029241) #14	CAPZA2 (ENSSTOG00000024828) #15	ST7 (ENSSTOG00000005659) #16	WNT2 (ENSSTOG00000005674) #17	ASZ1 (ENSSTOG00000005688) #18	ENSSTOG00000005707 #19	CTTNBP2 (ENSSTOG00000023371) #20	ENSSTOG00000009039 #22
Arctic ground squirrel	MODERN SPECIES	461											ST7 (ENSUPAG00010010994) #16	WNT2 (ENSUPAG00010011934) #17	ASZ1 (ENSUPAG00010011943) #18	ENSUPAG00010011963 #19	CTTNBP2 (ENSUPAG00010011972) #20	ENSUPAG00010012020 #22	ENSUPAG00010012025
Marmotini	ANCESTRAL SPECIES	18	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a.h	ENSGT00390000007975.b	ENSGT00960000190984	ENSGT00940000162211	ENSGT00390000001176	ENSGT00940000160828	ENSGT00940000155056	ENSGT00940000159584	ENSGT00940000155325	ENSGT01100000263544.c.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b	ENSGT00390000012644	ENSGT00730000111212.z #22	ENSGT00390000011494	ENSGT00390000003856	ENSGT00940000158726	ENSGT00940000158771	ENSGT00950000182956.b.b.b	ENSGT00390000008767.a.a.a.b	ENSGT00390000000705	ENSGT00940000156676	ENSGT00950000183017.b.b.a.b	ENSGT00940000160911	ENSGT00940000153185.a.a.b	ENSGT00960000190885	ENSGT00940000161869	ENSGT00940000155806	ENSGT00390000013228.e.a
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT00910000144115.a	ENSGT00940000153544.a.h	ENSGT00390000007975.b	ENSGT00950000185279	ENSGT00960000190984	ENSGT00940000162211	ENSGT00390000001176	ENSGT00940000160828	ENSGT00940000155056	ENSGT00940000159584	ENSGT00940000155325	ENSGT01100000263544.c.a.b.a	ENSGT00940000155264	ENSGT00990000203541.a.a.b	ENSGT00390000012644	ENSGT00730000111212.z #22	ENSGT00390000011494	ENSGT00390000003856	ENSGT00940000158726	ENSGT00940000158771	ENSGT00950000182956.b.b.b	ENSGT00390000008767.a.a.a.b	ENSGT00390000000705	ENSGT00940000156676	ENSGT00950000183017.b.b.a.b	ENSGT00940000160911	ENSGT00940000153185.a.a.b	ENSGT00960000190885	ENSGT00940000161869	ENSGT00940000155806	ENSGT00390000013228.e.a
Squirrel	MODERN SPECIES	76	ENSSTOG00000025407	KCTD20 (ENSSTOG00000011974)	ENSSTOG00000031664	ENSSTOG00000030608	ETV7 (ENSSTOG00000027253)	BNIP5 (ENSSTOG00000007388)	PNPLA1 (ENSSTOG00000026201)	BRPF3 (ENSSTOG00000006742)	ENSSTOG00000033183	MAPK13 (ENSSTOG00000025085)	MAPK14 (ENSSTOG00000020831)	SLC26A8 (ENSSTOG00000008184)	SRPK1 (ENSSTOG00000013724)	LHFPL5 (ENSSTOG00000013721)	Clps (ENSSTOG00000027903)	ENSSTOG00000034801 #22	CLPSL2 (ENSSTOG00000006012)	ARMC12 (ENSSTOG00000013713)	FKBP5 (ENSSTOG00000023914)	TULP1 (ENSSTOG00000015488)	TEAD3 (ENSSTOG00000024296)	ENSSTOG00000023366	FANCE (ENSSTOG00000000259)	PPARD (ENSSTOG00000019649)	DEF6 (ENSSTOG00000023306)	ZNF76 (ENSSTOG00000000256)	SCUBE3 (ENSSTOG00000000248)	TCP11 (ENSSTOG00000000247)	ANKS1A (ENSSTOG00000000241)	TAF11 (ENSSTOG00000013562)	BLTP3A (ENSSTOG00000026015)
Arctic ground squirrel	MODERN SPECIES	25	SRSF3 (ENSUPAG00010015936)	STK38 (ENSUPAG00010015884)	KCTD20 (ENSUPAG00010015823)	ENSUPAG00010015816	ENSUPAG00010015813	ETV7 (ENSUPAG00010015790)	BNIP5 (ENSUPAG00010015770)	PNPLA1 (ENSUPAG00010015749)	BRPF3 (ENSUPAG00010015651)	MAPK13 (ENSUPAG00010015630)	MAPK14 (ENSUPAG00010015552)	ENSUPAG00010015523	SRPK1 (ENSUPAG00010015498)	LHFPL5 (ENSUPAG00010015483)	CLPS (ENSUPAG00010015472)	ENSUPAG00010015457 #22	CLPSL2 (ENSUPAG00010015452)	ARMC12 (ENSUPAG00010015400)	FKBP5 (ENSUPAG00010015333)	ENSUPAG00010015324	TEAD3 (ENSUPAG00010015261)	RPL10A (ENSUPAG00010015209)	FANCE (ENSUPAG00010015114)	PPARD (ENSUPAG00010015080)	DEF6 (ENSUPAG00010015048)	ZNF76 (ENSUPAG00010014957)	SCUBE3 (ENSUPAG00010014823)	ENSUPAG00010014803	TCP11 (ENSUPAG00010014741)	ANKS1A (ENSUPAG00010014510)	TAF11 (ENSUPAG00010014501)
Alpin marmot	MODERN SPECIES	20	SRSF3 (ENSMMMG00000024376)	STK38 (ENSMMMG00000024371)	KCTD20 (ENSMMMG00000024365)	ENSMMMG00000024364	ENSMMMG00000024363	ENSMMMG00000024362	ETV7 (ENSMMMG00000024361)	PNPLA1 (ENSMMMG00000024358)	BRPF3 (ENSMMMG00000024354)	MAPK13 (ENSMMMG00000024349)	MAPK14 (ENSMMMG00000024347)	ENSMMMG00000024345	SRPK1 (ENSMMMG00000024344)	LHFPL5 (ENSMMMG00000024343)	CLPS (ENSMMMG00000024341)	ENSMMMG00000024340 #22	ARMC12 (ENSMMMG00000024339)	FKBP5 (ENSMMMG00000024335)	ENSMMMG00000024333	TEAD3 (ENSMMMG00000024332)	RPL10A (ENSMMMG00000024331)	FANCE (ENSMMMG00000024330)	PPARD (ENSMMMG00000024329)	DEF6 (ENSMMMG00000024328)	ZNF76 (ENSMMMG00000024327)	SCUBE3 (ENSMMMG00000024326)	ENSMMMG00000024324	TCP11 (ENSMMMG00000024323)	ANKS1A (ENSMMMG00000024322)	ENSMMMG00000024321	BLTP3A (ENSMMMG00000024320)
Eurasian red squirrel	MODERN SPECIES	17	MDFIC (ENSSVLG00005018724) #7	TFEC (ENSSVLG00005018526) #10	ENSSVLG00005018477	TES (ENSSVLG00005018372) #11	ENSSVLG00005018352	CAV2 (ENSSVLG00005018312) #12	CAV1 (ENSSVLG00005018241) #13	ENSSVLG00005018138	ENSSVLG00005018122	CAPZA2 (ENSSVLG00005017995) #15	ST7 (ENSSVLG00005015943) #16	WNT2 (ENSSVLG00005015494) #17	ENSSVLG00005015363 #18	CFTR (ENSSVLG00005014470) #19	CTTNBP2 (ENSSVLG00005014155) #20	LSM8 (ENSSVLG00005014022) #22	ENSSVLG00005013879	ENSSVLG00005013739	KCND2 (ENSSVLG00005013713) #23	TSPAN12 (ENSSVLG00005013639) #24	ING3 (ENSSVLG00005013543) #25	CPED1 (ENSSVLG00005013406) #26	WNT16 (ENSSVLG00005013269) #27	FAM3C (ENSSVLG00005013224) #28	ENSSVLG00005013132	PTPRZ1 (ENSSVLG00005010362) #29	AASS (ENSSVLG00005009890) #30	FEZF1 (ENSSVLG00005009793)	CADPS2 (ENSSVLG00005008973)	TAS2R16 (ENSSVLG00005008847)	SLC13A1 (ENSSVLG00005008725)
Lagomorpha	ANCESTRAL SPECIES	24	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326	ENSGT00390000008099
Pika	MODERN SPECIES	4443														CFTR (ENSOPRG00000014721) #19	CTTNBP2 (ENSOPRG00000014785) #20	LSM8 (ENSOPRG00000014809) #22	ENSOPRG00000014817
Rabbit	MODERN SPECIES	18	ENSOCUG00000038780	ENSOCUG00000024434	FOXP2 (ENSOCUG00000001801)	MDFIC (ENSOCUG00000012455) #7	TFEC (ENSOCUG00000006292) #10	TES (ENSOCUG00000008491) #11	CAV2 (ENSOCUG00000014515) #12	CAV1 (ENSOCUG00000014520) #13	MET (ENSOCUG00000013060) #14	ST7 (ENSOCUG00000016156) #16	WNT2 (ENSOCUG00000016173) #17	ASZ1 (ENSOCUG00000015962) #18	CFTR (ENSOCUG00000010733) #19	ENSOCUG00000038182	CTTNBP2 (ENSOCUG00000001386) #20	LSM8 (ENSOCUG00000017359) #22	ENSOCUG00000021922	ENSOCUG00000032257	ENSOCUG00000023965	ENSOCUG00000037642	KCND2 (ENSOCUG00000004149) #23	TSPAN12 (ENSOCUG00000001875) #24	ENSOCUG00000034467	ING3 (ENSOCUG00000001881) #25	CPED1 (ENSOCUG00000005778) #26	WNT16 (ENSOCUG00000014744) #27	FAM3C (ENSOCUG00000003351) #28	PTPRZ1 (ENSOCUG00000013209) #29	AASS (ENSOCUG00000013237) #30	FEZF1 (ENSOCUG00000021285)	ENSOCUG00000039223
Primates	ANCESTRAL SPECIES	12	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT01100000263477.B.d.b
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Hominidae	ANCESTRAL SPECIES	11	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Pan	ANCESTRAL SPECIES	13	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00950000182802.A.a.a.e.b.b	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT01100000263543.a.g.b.b.b.a.c.b.a	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382
Chimpanzee	MODERN SPECIES	20	SMIM30 (ENSPTRG00000051687)	PPP1R3A (ENSPTRG00000019607)	FOXP2 (ENSPTRG00000019608)	MDFIC (ENSPTRG00000019609) #7	TFEC (ENSPTRG00000047353) #10	TES (ENSPTRG00000023877) #11	CAV2 (ENSPTRG00000040031) #12	CAV1 (ENSPTRG00000019613) #13	MET (ENSPTRG00000019614) #14	CAPZA2 (ENSPTRG00000019615) #15	ST7 (ENSPTRG00000019616) #16	WNT2 (ENSPTRG00000019617) #17	ASZ1 (ENSPTRG00000019618) #18	CFTR (ENSPTRG00000019619) #19	CTTNBP2 (ENSPTRG00000019620) #20	LSM8 (ENSPTRG00000046596) #22	ANKRD7 (ENSPTRG00000019622)	ENSPTRG00000050664	KCND2 (ENSPTRG00000047469) #23	TSPAN12 (ENSPTRG00000019624) #24	ING3 (ENSPTRG00000019625) #25	CPED1 (ENSPTRG00000019626) #26	ENSPTRG00000044943	WNT16 (ENSPTRG00000019627) #27	FAM3C (ENSPTRG00000022727) #28	ENSPTRG00000043912	ENSPTRG00000045463	PTPRZ1 (ENSPTRG00000019629) #29	AASS (ENSPTRG00000023614) #30	ENSPTRG00000044831	FEZF1 (ENSPTRG00000019631)
Bonobo	MODERN SPECIES	20	PPP1R3A (ENSPPAG00000041499)	FOXP2 (ENSPPAG00000030868)	ENSPPAG00000027647 #7	ENSPPAG00000004955 #10	TES (ENSPPAG00000034692) #11	CAV2 (ENSPPAG00000042201) #12	CAV1 (ENSPPAG00000036739) #13	MET (ENSPPAG00000038004) #14	CAPZA2 (ENSPPAG00000043436) #15	ENSPPAG00000042892	ST7 (ENSPPAG00000028019) #16	WNT2 (ENSPPAG00000030407) #17	ASZ1 (ENSPPAG00000041362) #18	CFTR (ENSPPAG00000040492) #19	CTTNBP2 (ENSPPAG00000032264) #20	ENSPPAG00000043228 #22	ANKRD7 (ENSPPAG00000011992)	ENSPPAG00000026407	KCND2 (ENSPPAG00000034678) #23	TSPAN12 (ENSPPAG00000033647) #24	ING3 (ENSPPAG00000029024) #25	CPED1 (ENSPPAG00000036887) #26	ENSPPAG00000032331	WNT16 (ENSPPAG00000028372) #27	FAM3C (ENSPPAG00000037694) #28	ENSPPAG00000042900	PTPRZ1 (ENSPPAG00000042542) #29	AASS (ENSPPAG00000041360) #30	FEZF1 (ENSPPAG00000027222)	CADPS2 (ENSPPAG00000029988)	ENSPPAG00000027242
Human	MODERN SPECIES	19	PPP1R3A (ENSG00000154415)	FOXP2 (ENSG00000128573)	MDFIC (ENSG00000135272) #7	TFEC (ENSG00000105967) #10	TES (ENSG00000135269) #11	CAV2 (ENSG00000105971) #12	CAV1 (ENSG00000105974) #13	MET (ENSG00000105976) #14	CAPZA2 (ENSG00000198898) #15	ST7 (ENSG00000004866) #16	ENSG00000288635	WNT2 (ENSG00000105989) #17	CFTR (ENSG00000001626) #19	ASZ1 (ENSG00000154438) #18	CTTNBP2 (ENSG00000077063) #20	LSM8 (ENSG00000128534) #22	ANKRD7 (ENSG00000106013)	KCND2 (ENSG00000184408) #23	TSPAN12 (ENSG00000106025) #24	ING3 (ENSG00000071243) #25	CPED1 (ENSG00000106034) #26	WNT16 (ENSG00000002745) #27	FAM3C (ENSG00000196937) #28	PTPRZ1 (ENSG00000106278) #29	AASS (ENSG00000008311) #30	FEZF1 (ENSG00000128610)	CADPS2 (ENSG00000081803)	RNF133 (ENSG00000188050)	RNF148 (ENSG00000235631)	TAS2R16 (ENSG00000128519)	SLC13A1 (ENSG00000081800)
Gorilla	MODERN SPECIES	20	PPP1R3A (ENSGGOG00000005621)	FOXP2 (ENSGGOG00000027435)	ENSGGOG00000042671 #7	TFEC (ENSGGOG00000009901) #10	TES (ENSGGOG00000016067) #11	CAV2 (ENSGGOG00000015074) #12	CAV1 (ENSGGOG00000027870) #13	MET (ENSGGOG00000012982) #14	CAPZA2 (ENSGGOG00000012158) #15	ENSGGOG00000027365	ST7 (ENSGGOG00000014410) #16	WNT2 (ENSGGOG00000009721) #17	ASZ1 (ENSGGOG00000002659) #18	CFTR (ENSGGOG00000004019) #19	CTTNBP2 (ENSGGOG00000014941) #20	LSM8 (ENSGGOG00000041883) #22	ANKRD7 (ENSGGOG00000025444)	ENSGGOG00000039138	KCND2 (ENSGGOG00000043715) #23	TSPAN12 (ENSGGOG00000034918) #24	ING3 (ENSGGOG00000004349) #25	CPED1 (ENSGGOG00000014223) #26	WNT16 (ENSGGOG00000016506) #27	FAM3C (ENSGGOG00000016446) #28	PTPRZ1 (ENSGGOG00000023127) #29	AASS (ENSGGOG00000027257) #30	CADPS2 (ENSGGOG00000034978)	ENSGGOG00000042593	TAS2R16 (ENSGGOG00000010354)	SLC13A1 (ENSGGOG00000006358)	IQUB (ENSGGOG00000015921)
Orangutan	MODERN SPECIES	20	SMIM30 (ENSPPYG00000017923)	PPP1R3A (ENSPPYG00000040617)	FOXP2 (ENSPPYG00000017926)	ENSPPYG00000038658 #7	TFEC (ENSPPYG00000031887) #10	TES (ENSPPYG00000017929) #11	CAV2 (ENSPPYG00000017930) #12	CAV1 (ENSPPYG00000017931) #13	MET (ENSPPYG00000017932) #14	CAPZA2 (ENSPPYG00000017933) #15	ST7 (ENSPPYG00000017934) #16	WNT2 (ENSPPYG00000017938) #17	ASZ1 (ENSPPYG00000017939) #18	CFTR (ENSPPYG00000017940) #19	CTTNBP2 (ENSPPYG00000017941) #20	LSM8 (ENSPPYG00000033700) #22	ANKRD7 (ENSPPYG00000018274)	KCND2 (ENSPPYG00000017943) #23	TSPAN12 (ENSPPYG00000017944) #24	ING3 (ENSPPYG00000017945) #25	CPED1 (ENSPPYG00000017946) #26	WNT16 (ENSPPYG00000017947) #27	FAM3C (ENSPPYG00000017948) #28	PTPRZ1 (ENSPPYG00000017949) #29	AASS (ENSPPYG00000017950) #30	FEZF1 (ENSPPYG00000017951)	CADPS2 (ENSPPYG00000017952)	ENSPPYG00000038373	TAS2R16 (ENSPPYG00000017953)	SLC13A1 (ENSPPYG00000017954)	IQUB (ENSPPYG00000017955)
Gibbon	MODERN SPECIES	3	FOXP2 (ENSNLEG00000011394)	ENSNLEG00000033212 #7	TFEC (ENSNLEG00000011480) #10	TES (ENSNLEG00000011494) #11	ENSNLEG00000011523 #12	CAV1 (ENSNLEG00000028023) #13	MET (ENSNLEG00000011530) #14	ENSNLEG00000011604 #15	ENSNLEG00000032514	ST7 (ENSNLEG00000011617) #16	ENSNLEG00000036065	WNT2 (ENSNLEG00000011635) #17	ASZ1 (ENSNLEG00000011649) #18	CFTR (ENSNLEG00000011680) #19	CTTNBP2 (ENSNLEG00000011717) #20	LSM8 (ENSNLEG00000011768) #22	ANKRD7 (ENSNLEG00000011773)	KCND2 (ENSNLEG00000035189) #23	TSPAN12 (ENSNLEG00000011786) #24	ING3 (ENSNLEG00000033180) #25	CPED1 (ENSNLEG00000011852) #26	WNT16 (ENSNLEG00000011905) #27	FAM3C (ENSNLEG00000011915) #28	PTPRZ1 (ENSNLEG00000011934) #29	AASS (ENSNLEG00000011978) #30	ENSNLEG00000012020	CADPS2 (ENSNLEG00000012024)	ENSNLEG00000030675	SLC13A1 (ENSNLEG00000012101)	IQUB (ENSNLEG00000012115)	NDUFA5 (ENSNLEG00000030214)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT01100000263477.B.d.b
Cercopithecinae	DUPLICATION
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.`b #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT01100000263477.B.d.b
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.`b #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT01010000223358	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.`b #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT01010000223358	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.`b #22	ENSGT00940000164704	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Rhesus	MODERN SPECIES	13	MDFIC (ENSMMUG00000019776) #7	TFEC (ENSMMUG00000038489) #10	TES (ENSMMUG00000007097) #11	CAV2 (ENSMMUG00000061706) #12	CAV1 (ENSMMUG00000014122) #13	MET (ENSMMUG00000006779) #14	CAPZA2 (ENSMMUG00000006784) #15	ENSMMUG00000052234	ST7 (ENSMMUG00000021722) #16	WNT2 (ENSMMUG00000055123) #17	ENSMMUG00000064285	ASZ1 (ENSMMUG00000021726) #18	CFTR (ENSMMUG00000011269) #19	ENSMMUG00000060895	CTTNBP2 (ENSMMUG00000010297) #20	LSM8 (ENSMMUG00000060460) #22	ANKRD7 (ENSMMUG00000050524)	ENSMMUG00000052979	KCND2 (ENSMMUG00000023308) #23	TSPAN12 (ENSMMUG00000023310) #24	ING3 (ENSMMUG00000002434) #25	CPED1 (ENSMMUG00000002435) #26	WNT16 (ENSMMUG00000002439) #27	FAM3C (ENSMMUG00000002440) #28	PTPRZ1 (ENSMMUG00000012418) #29	AASS (ENSMMUG00000044304) #30	FEZF1 (ENSMMUG00000021542)	CADPS2 (ENSMMUG00000021543)	TAS2R16 (ENSMMUG00000064934)	SLC13A1 (ENSMMUG00000016770)	IQUB (ENSMMUG00000011536)
Crab-eating macaque	MODERN SPECIES	13	MDFIC (ENSMFAG00000050895) #7	TFEC (ENSMFAG00000035684) #10	TES (ENSMFAG00000005909) #11	ENSMFAG00000064881	CAV2 (ENSMFAG00000048330) #12	CAV1 (ENSMFAG00000046330) #13	MET (ENSMFAG00000028602) #14	CAPZA2 (ENSMFAG00000041237) #15	ST7 (ENSMFAG00000008568) #16	WNT2 (ENSMFAG00000044147) #17	ASZ1 (ENSMFAG00000033937) #18	CFTR (ENSMFAG00000000170) #19	ENSMFAG00000053020	CTTNBP2 (ENSMFAG00000039255) #20	ENSMFAG00000056701	LSM8 (ENSMFAG00000047892) #22	ANKRD7 (ENSMFAG00000039109)	KCND2 (ENSMFAG00000046158) #23	TSPAN12 (ENSMFAG00000002377) #24	ING3 (ENSMFAG00000044425) #25	CPED1 (ENSMFAG00000031588) #26	WNT16 (ENSMFAG00000031359) #27	FAM3C (ENSMFAG00000043181) #28	PTPRZ1 (ENSMFAG00000032576) #29	AASS (ENSMFAG00000038411) #30	FEZF1 (ENSMFAG00000034053)	CADPS2 (ENSMFAG00000040292)	ENSMFAG00000041426	TAS2R16 (ENSMFAG00000064959)	SLC13A1 (ENSMFAG00000030904)	IQUB (ENSMFAG00000038536)
Pig-tailed macaque	MODERN SPECIES	95	MDFIC (ENSMNEG00000045431) #7	TFEC (ENSMNEG00000000097) #10	ENSMNEG00000021473	ENSMNEG00000038687	TES (ENSMNEG00000039367) #11	CAV2 (ENSMNEG00000042279) #12	CAV1 (ENSMNEG00000044995) #13	MET (ENSMNEG00000038573) #14	CAPZA2 (ENSMNEG00000044342) #15	ENSMNEG00000042576	ST7 (ENSMNEG00000043047) #16	WNT2 (ENSMNEG00000035850) #17	ASZ1 (ENSMNEG00000042319) #18	CFTR (ENSMNEG00000042569) #19	CTTNBP2 (ENSMNEG00000039935) #20	ENSMNEG00000036764 #22	ANKRD7 (ENSMNEG00000029642)	ENSMNEG00000007384	ENSMNEG00000038870	KCND2 (ENSMNEG00000001242) #23	TSPAN12 (ENSMNEG00000034729) #24	ING3 (ENSMNEG00000038183) #25	CPED1 (ENSMNEG00000037782) #26	WNT16 (ENSMNEG00000037874) #27	FAM3C (ENSMNEG00000006860) #28	PTPRZ1 (ENSMNEG00000038637) #29	AASS (ENSMNEG00000031610) #30	FEZF1 (ENSMNEG00000017416)	ENSMNEG00000037281	CADPS2 (ENSMNEG00000009908)	SLC13A1 (ENSMNEG00000035147)
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.`b #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT01010000223358	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a
Olive baboon	MODERN SPECIES	14	SMIM30 (ENSPANG00000031865)	PPP1R3A (ENSPANG00000017583)	FOXP2 (ENSPANG00000024715)	MDFIC (ENSPANG00000015175) #7	TFEC (ENSPANG00000022367) #10	TES (ENSPANG00000008934) #11	CAV2 (ENSPANG00000045499) #12	CAV1 (ENSPANG00000015174) #13	MET (ENSPANG00000024383) #14	CAPZA2 (ENSPANG00000024714) #15	ST7 (ENSPANG00000020407) #16	WNT2 (ENSPANG00000048086) #17	ASZ1 (ENSPANG00000016260) #18	CFTR (ENSPANG00000015987) #19	CTTNBP2 (ENSPANG00000007108) #20	ENSPANG00000039754 #22	ANKRD7 (ENSPANG00000016259)	ENSPANG00000045599	KCND2 (ENSPANG00000032534) #23	TSPAN12 (ENSPANG00000032965) #24	ING3 (ENSPANG00000018195) #25	CPED1 (ENSPANG00000016466) #26	WNT16 (ENSPANG00000025364) #27	FAM3C (ENSPANG00000006062) #28	ENSPANG00000044216	ENSPANG00000038082	ENSPANG00000045443	ENSPANG00000040908	PTPRZ1 (ENSPANG00000019044) #29	AASS (ENSPANG00000015986) #30	FEZF1 (ENSPANG00000013797)
Cercopithecinae_d	ANCESTRAL SPECIES	24	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.`b #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT01010000223358	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01030000234550.a.a.d.a.a
Sooty mangabey	MODERN SPECIES	283	ENSCATG00000039945	FOXP2 (ENSCATG00000043286)	MDFIC (ENSCATG00000005944) #7	TFEC (ENSCATG00000035757) #10	TES (ENSCATG00000018148) #11	CAV2 (ENSCATG00000031761) #12	CAV1 (ENSCATG00000030906) #13	MET (ENSCATG00000043244) #14	CAPZA2 (ENSCATG00000040117) #15	ST7 (ENSCATG00000044990) #16	ENSCATG00000034007	WNT2 (ENSCATG00000040118) #17	ASZ1 (ENSCATG00000034312) #18	CFTR (ENSCATG00000045275) #19	CTTNBP2 (ENSCATG00000043370) #20	LSM8 (ENSCATG00000045302) #22	ANKRD7 (ENSCATG00000005822)	ENSCATG00000014280	KCND2 (ENSCATG00000034255) #23	ENSCATG00000013909	TSPAN12 (ENSCATG00000032384) #24	ING3 (ENSCATG00000037947) #25	CPED1 (ENSCATG00000034268) #26	WNT16 (ENSCATG00000042098) #27	FAM3C (ENSCATG00000033663) #28	PTPRZ1 (ENSCATG00000042812) #29	AASS (ENSCATG00000024168) #30	FEZF1 (ENSCATG00000037503)	CADPS2 (ENSCATG00000017941)	ENSCATG00000041130	SLC13A1 (ENSCATG00000044783)
Drill	MODERN SPECIES	1433																ENSMLEG00000035828 #22	ENSMLEG00000014724
Vervet Monkey	MODERN SPECIES	13	PPP1R3A (ENSCSAG00000011088)	FOXP2 (ENSCSAG00000011057)	MDFIC (ENSCSAG00000010952) #7	TFEC (ENSCSAG00000010942) #10	TES (ENSCSAG00000010935) #11	CAV2 (ENSCSAG00000010925) #12	CAV1 (ENSCSAG00000010920) #13	MET (ENSCSAG00000010912) #14	CAPZA2 (ENSCSAG00000010902) #15	ST7 (ENSCSAG00000010897) #16	ENSCSAG00000010890	WNT2 (ENSCSAG00000010887) #17	ASZ1 (ENSCSAG00000010871) #18	ENSCSAG00000010820 #19	CTTNBP2 (ENSCSAG00000010811) #20	ENSCSAG00000010802 #22	ANKRD7 (ENSCSAG00000010796)	KCND2 (ENSCSAG00000010780) #23	TSPAN12 (ENSCSAG00000010773) #24	ING3 (ENSCSAG00000010764) #25	CPED1 (ENSCSAG00000010728) #26	WNT16 (ENSCSAG00000010637) #27	FAM3C (ENSCSAG00000010624) #28	PTPRZ1 (ENSCSAG00000010610) #29	AASS (ENSCSAG00000010587) #30	FEZF1 (ENSCSAG00000010570)	CADPS2 (ENSCSAG00000010492)	RNF133 (ENSCSAG00000019132)	RNF148 (ENSCSAG00000019133)	TAS2R16 (ENSCSAG00000019134)	SLC13A1 (ENSCSAG00000010311)
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00730000111212.ab #22
Vervet Monkey	MODERN SPECIES	23	HTR1A (ENSCSAG00000019005)	RNF180 (ENSCSAG00000015992)	RGS7BP (ENSCSAG00000015985)	SHISAL2B (ENSCSAG00000015980)	SREK1IP1 (ENSCSAG00000015974)	CWC27 (ENSCSAG00000015969)	ENSCSAG00000015963	ENSCSAG00000019006	ENSCSAG00000015957	CENPK (ENSCSAG00000015953)	PPWD1 (ENSCSAG00000015951)	TRIM23 (ENSCSAG00000015945)	TRAPPC13 (ENSCSAG00000015937)	SGTB (ENSCSAG00000015931)	NLN (ENSCSAG00000015928)	ENSCSAG00000019007 #22	ENSCSAG00000019008	ERBIN (ENSCSAG00000015920)	ENSCSAG00000015908	ENSCSAG00000015898	MAST4 (ENSCSAG00000015895)	CD180 (ENSCSAG00000015891)	ENSCSAG00000019009	PIK3R1 (ENSCSAG00000015888)	ENSCSAG00000015881	SLC30A5 (ENSCSAG00000015873)	CCNB1 (ENSCSAG00000015867)	CENPH (ENSCSAG00000015861)	CDK7 (ENSCSAG00000015846)	CCDC125 (ENSCSAG00000015817)	ENSCSAG00000015802
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000154484.B.a.a	ENSGT00950000182909.a	ENSGT00940000153725.b	ENSGT00940000161622	ENSGT01100000263493.a.b.b.a.a.a.a.b.b	ENSGT00510000047710	ENSGT00940000155967	ENSGT00940000156571	ENSGT00390000006243	ENSGT00940000158733	ENSGT00940000158562	ENSGT00530000065159	ENSGT00390000015280	ENSGT00940000158321	ENSGT00950000183171.A.b.a.a	ENSGT00730000111212.ab #22	ENSGT00910000146862	ENSGT00940000159526	ENSGT00730000110872.a	ENSGT00940000156399	ENSGT00940000161183	ENSGT00940000155553	ENSGT00390000000566.r.b.b.a.b	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578	ENSGT00390000017443.t.a.a	ENSGT00940000155179.c.a	ENSGT00440000039958	ENSGT00390000015930.y.a.a	ENSGT00940000155097 #8
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000163637	ENSGT00910000147727	ENSGT00940000154484.B.a.a	ENSGT00950000182909.a	ENSGT00940000153725.b	ENSGT00940000161622	ENSGT00510000047710	ENSGT00940000155967	ENSGT00940000156571	ENSGT00390000006243	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000015280	ENSGT00940000158321	ENSGT00950000183171.A.b.a.a	ENSGT00730000111212.ab #22	ENSGT00910000146862	ENSGT00940000159526	ENSGT00730000110872.a	ENSGT00940000156399	ENSGT00940000161183	ENSGT00940000155553	ENSGT00390000000566.r.b.b.a.b	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578	ENSGT00390000017443.t.a.a	ENSGT00940000155179.c.a	ENSGT00440000039958	ENSGT00390000015930.y.a.a	ENSGT00940000155097 #8
Cercopithecinae_d	ANCESTRAL SPECIES	187		ENSGT00910000147727	ENSGT00940000154484.B.a.a	ENSGT00950000182909.a	ENSGT00940000153725.b	ENSGT00940000161622	ENSGT00510000047710	ENSGT00940000155967	ENSGT00940000156571	ENSGT00390000006243	ENSGT00940000158733	ENSGT00940000158562	ENSGT00390000015280	ENSGT00940000158321	ENSGT00950000183171.A.b.a.a	ENSGT00730000111212.ab #22	ENSGT00910000146862	ENSGT00940000159526
Drill	MODERN SPECIES	1508						SHISAL2B (ENSMLEG00000036189)	SREK1IP1 (ENSMLEG00000030454)	CWC27 (ENSMLEG00000029952)	ADAMTS6 (ENSMLEG00000042342)	CENPK (ENSMLEG00000041730)	PPWD1 (ENSMLEG00000038982)	TRIM23 (ENSMLEG00000040891)	TRAPPC13 (ENSMLEG00000035550)	SGTB (ENSMLEG00000032069)	NLN (ENSMLEG00000032550)	ENSMLEG00000039324 #22	ENSMLEG00000033517	ERBIN (ENSMLEG00000037570)
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000154484.B.a.a	ENSGT00950000182909.a	ENSGT00940000153725.b	ENSGT00940000161622	ENSGT01100000263493.a.b.b.a.a.a.a.b.b	ENSGT00510000047710	ENSGT00940000155967	ENSGT00940000156571	ENSGT00390000006243	ENSGT00940000158733	ENSGT00940000158562	ENSGT00530000065159	ENSGT00390000015280	ENSGT00940000158321	ENSGT00950000183171.A.b.a.a	ENSGT00730000111212.ab #22	ENSGT00910000146862	ENSGT00940000159526	ENSGT00730000110872.a	ENSGT00390000000707.k.a.a.a	ENSGT00940000156399	ENSGT00940000161183	ENSGT00940000155553	ENSGT00390000000566.r.b.b.a.b	ENSGT00940000155754	ENSGT00940000154586	ENSGT00390000009578	ENSGT00390000017443.t.b.a	ENSGT00940000155179.c.a	ENSGT00440000039958	ENSGT00390000015930.y.a.b.a
Pig-tailed macaque	MODERN SPECIES	283	IPO11 (ENSMNEG00000032061)	ENSMNEG00000029563	HTR1A (ENSMNEG00000005737)	RNF180 (ENSMNEG00000029156)	RGS7BP (ENSMNEG00000042653)	SHISAL2B (ENSMNEG00000037285)	SREK1IP1 (ENSMNEG00000040413)	CWC27 (ENSMNEG00000026520)	ADAMTS6 (ENSMNEG00000029474)	CENPK (ENSMNEG00000045242)	PPWD1 (ENSMNEG00000037074)	TRIM23 (ENSMNEG00000038500)	TRAPPC13 (ENSMNEG00000034792)	SGTB (ENSMNEG00000044712)	NLN (ENSMNEG00000038491)	ENSMNEG00000011141 #22	ENSMNEG00000042743	ERBIN (ENSMNEG00000021904)
Rhinopithecus	ANCESTRAL SPECIES	328	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000155264.m.b.a	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b.n.a #15	ENSGT00910000147739	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704
Golden snub-nosed monkey	MODERN SPECIES	2727					CAV2 (ENSRROG00000034834) #12	CAV1 (ENSRROG00000035906) #13	ENSRROG00000011599	MET (ENSRROG00000042487) #14	ENSRROG00000039690	CAPZA2 (ENSRROG00000005766) #15	ST7 (ENSRROG00000037257) #16	WNT2 (ENSRROG00000016067) #17	ASZ1 (ENSRROG00000041719) #18	CFTR (ENSRROG00000026792) #19	CTTNBP2 (ENSRROG00000040541) #20	LSM8 (ENSRROG00000039618) #22	ANKRD7 (ENSRROG00000029970)
Black snub-nosed monkey	MODERN SPECIES	209	ENSRBIG00000032733	TMEM270 (ENSRBIG00000036134)	ELN (ENSRBIG00000041564)	LIMK1 (ENSRBIG00000028914)	EIF4H (ENSRBIG00000014939)	LAT2 (ENSRBIG00000037481)	RFC2 (ENSRBIG00000034145)	CLIP2 (ENSRBIG00000029416)	CAPZA2 (ENSRBIG00000043946) #15	ENSRBIG00000034828	ST7 (ENSRBIG00000035138) #16	WNT2 (ENSRBIG00000044176) #17	ASZ1 (ENSRBIG00000026606) #18	CFTR (ENSRBIG00000037824) #19	CTTNBP2 (ENSRBIG00000028759) #20	LSM8 (ENSRBIG00000032851) #22	ANKRD7 (ENSRBIG00000030492)
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Cebidae	ANCESTRAL SPECIES	9	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000164704	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Bolivian squirrel monkey	MODERN SPECIES	44	PPP1R3A (ENSSBOG00000031325)	FOXP2 (ENSSBOG00000029085)	MDFIC (ENSSBOG00000032800) #7	TFEC (ENSSBOG00000024242) #10	TES (ENSSBOG00000031613) #11	CAV2 (ENSSBOG00000023114) #12	CAV1 (ENSSBOG00000029819) #13	MET (ENSSBOG00000018494) #14	ENSSBOG00000033214	CAPZA2 (ENSSBOG00000026180) #15	ST7 (ENSSBOG00000031136) #16	WNT2 (ENSSBOG00000026115) #17	ASZ1 (ENSSBOG00000014420) #18	CFTR (ENSSBOG00000034493) #19	CTTNBP2 (ENSSBOG00000032674) #20	LSM8 (ENSSBOG00000023223) #22	ANKRD7 (ENSSBOG00000021785)	ENSSBOG00000018270	KCND2 (ENSSBOG00000020186) #23	TSPAN12 (ENSSBOG00000018467) #24	ING3 (ENSSBOG00000032892) #25	CPED1 (ENSSBOG00000030761) #26	WNT16 (ENSSBOG00000028903) #27	FAM3C (ENSSBOG00000035343) #28	ENSSBOG00000023808	PTPRZ1 (ENSSBOG00000031204) #29	AASS (ENSSBOG00000023976) #30	FEZF1 (ENSSBOG00000024490)	ENSSBOG00000030358	CADPS2 (ENSSBOG00000027008)	SLC13A1 (ENSSBOG00000023645)
Capuchin	MODERN SPECIES	90	SMIM30 (ENSCCAG00000007418)	PPP1R3A (ENSCCAG00000033016)	FOXP2 (ENSCCAG00000003699)	MDFIC (ENSCCAG00000022551) #7	TFEC (ENSCCAG00000022469) #10	TES (ENSCCAG00000036382) #11	CAV2 (ENSCCAG00000023447) #12	CAV1 (ENSCCAG00000031872) #13	MET (ENSCCAG00000031166) #14	CAPZA2 (ENSCCAG00000030246) #15	ST7 (ENSCCAG00000022641) #16	WNT2 (ENSCCAG00000031998) #17	ASZ1 (ENSCCAG00000028858) #18	CFTR (ENSCCAG00000026860) #19	CTTNBP2 (ENSCCAG00000021725) #20	LSM8 (ENSCCAG00000021329) #22	ANKRD7 (ENSCCAG00000028943)
Marmoset	MODERN SPECIES	20	ENSCJAG00000053054	TFEC (ENSCJAG00000047848) #10	TES (ENSCJAG00000005193) #11	ENSCJAG00000079520	CAV2 (ENSCJAG00000054908) #12	CAV1 (ENSCJAG00000063550) #13	MET (ENSCJAG00000005145) #14	CAPZA2 (ENSCJAG00000005079) #15	ST7 (ENSCJAG00000004988) #16	ENSCJAG00000086472	WNT2 (ENSCJAG00000004983) #17	ASZ1 (ENSCJAG00000004944) #18	ENSCJAG00000074557	CFTR (ENSCJAG00000004895) #19	CTTNBP2 (ENSCJAG00000004816) #20	LSM8 (ENSCJAG00000077574) #22	ENSCJAG00000064536	ANKRD7 (ENSCJAG00000004788)	VIPR2 (ENSCJAG00000014084)	DYNC2I1 (ENSCJAG00000014109)	ESYT2 (ENSCJAG00000014123)	NCAPG2 (ENSCJAG00000015156)	PTPRN2 (ENSCJAG00000005320)	DNAJB6 (ENSCJAG00000005288)	ENSCJAG00000085556	UBE3C (ENSCJAG00000004298)	ENSCJAG00000078997	ENSCJAG00000004336	ENSCJAG00000079983	LMBR1 (ENSCJAG00000004344)	RNF32 (ENSCJAG00000004357)
Mas night monkey	MODERN SPECIES	298														CFTR (ENSANAG00000018699) #19	CTTNBP2 (ENSANAG00000035530) #20	LSM8 (ENSANAG00000027771) #22	ANKRD7 (ENSANAG00000027505)
Tarsier	MODERN SPECIES	5766																LSM8 (ENSTSYG00000032434) #22
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT01100000263477.B.d.b
Lemuriformes	DUPLICATION
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.bb #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Mouse lemur	MODERN SPECIES	2	SMIM30 (ENSMICG00000041783)	PPP1R3A (ENSMICG00000046647)	FOXP2 (ENSMICG00000003648)	ENSMICG00000003662 #7	TFEC (ENSMICG00000006995) #10	TES (ENSMICG00000007002) #11	CAV2 (ENSMICG00000045272) #12	CAV1 (ENSMICG00000026847) #13	MET (ENSMICG00000000697) #14	CAPZA2 (ENSMICG00000032607) #15	ST7 (ENSMICG00000005741) #16	WNT2 (ENSMICG00000005749) #17	ASZ1 (ENSMICG00000005752) #18	CFTR (ENSMICG00000046039) #19	CTTNBP2 (ENSMICG00000005787) #20	LSM8 (ENSMICG00000042730) #22	ENSMICG00000036567	ENSMICG00000048064	KCND2 (ENSMICG00000043428) #23	TSPAN12 (ENSMICG00000000958) #24	ENSMICG00000013934 #25	CPED1 (ENSMICG00000036835) #26	WNT16 (ENSMICG00000013963) #27	FAM3C (ENSMICG00000034347) #28	ENSMICG00000026612	ENSMICG00000030043	PTPRZ1 (ENSMICG00000000608) #29	AASS (ENSMICG00000000617) #30	FEZF1 (ENSMICG00000033586)	ENSMICG00000034262	CADPS2 (ENSMICG00000001954)
Lemuriformes_a	ANCESTRAL SPECIES	103	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.bb #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Coquerels sifaka	MODERN SPECIES	544	PPP1R3A (ENSPCOG00000020348)	FOXP2 (ENSPCOG00000027439)	MDFIC (ENSPCOG00000002097) #7	TFEC (ENSPCOG00000026787) #10	ENSPCOG00000014908	TES (ENSPCOG00000009261) #11	CAV2 (ENSPCOG00000025837) #12	CAV1 (ENSPCOG00000024742) #13	MET (ENSPCOG00000022991) #14	CAPZA2 (ENSPCOG00000021478) #15	ST7 (ENSPCOG00000008893) #16	WNT2 (ENSPCOG00000027908) #17	ASZ1 (ENSPCOG00000018076) #18	CFTR (ENSPCOG00000014929) #19	CTTNBP2 (ENSPCOG00000000372) #20	ENSPCOG00000003309 #22	ENSPCOG00000017095	KCND2 (ENSPCOG00000015891) #23	TSPAN12 (ENSPCOG00000021720) #24	ENSPCOG00000028787	CPED1 (ENSPCOG00000016564) #26	WNT16 (ENSPCOG00000015467) #27	FAM3C (ENSPCOG00000019661) #28	ENSPCOG00000025054	PTPRZ1 (ENSPCOG00000025981) #29	AASS (ENSPCOG00000027625) #30	FEZF1 (ENSPCOG00000021658)	ENSPCOG00000007052	CADPS2 (ENSPCOG00000028725)	ENSPCOG00000013869	IQUB (ENSPCOG00000016916)
Greater bamboo lemur	MODERN SPECIES	654								ENSPSMG00000015643	CAPZA2 (ENSPSMG00000015591) #15	ST7 (ENSPSMG00000015388) #16	WNT2 (ENSPSMG00000015124) #17	ASZ1 (ENSPSMG00000015104) #18	CFTR (ENSPSMG00000015055) #19	ENSPSMG00000014944	CTTNBP2 (ENSPSMG00000014929) #20	ENSPSMG00000014842 #22	ENSPSMG00000014837	ENSPSMG00000014820	KCND2 (ENSPSMG00000014803) #23	TSPAN12 (ENSPSMG00000014789) #24	ING3 (ENSPSMG00000014755) #25	CPED1 (ENSPSMG00000014697) #26	WNT16 (ENSPSMG00000014604) #27	FAM3C (ENSPSMG00000014578) #28	PTPRZ1 (ENSPSMG00000014542) #29	AASS (ENSPSMG00000014416) #30	FEZF1 (ENSPSMG00000014374)	CADPS2 (ENSPSMG00000014152)	TAS2R16 (ENSPSMG00000013871)	SLC13A1 (ENSPSMG00000013858)	IQUB (ENSPSMG00000013811)
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00730000111212.cb #22
Lemuriformes_a	ANCESTRAL SPECIES																	ENSGT00730000111212.cb #22
Coquerels sifaka	MODERN SPECIES	371	THAP9 (ENSPCOG00000019315)	LIN54 (ENSPCOG00000016222)	COPS4 (ENSPCOG00000019543)	ENSPCOG00000024594	COQ2 (ENSPCOG00000016807)	HPSE (ENSPCOG00000028547)	HELQ (ENSPCOG00000001114)	MRPS18C (ENSPCOG00000017634)	ABRAXAS1 (ENSPCOG00000024017)	GPAT3 (ENSPCOG00000015710)	NKX6-1 (ENSPCOG00000026560)	CDS1 (ENSPCOG00000017585)	WDFY3 (ENSPCOG00000022708)	ARHGAP24 (ENSPCOG00000000502)	MAPK10 (ENSPCOG00000023059)	ENSPCOG00000017982 #22	PTPN13 (ENSPCOG00000023990)	SLC10A6 (ENSPCOG00000026098)	C4orf36 (ENSPCOG00000023888)	AFF1 (ENSPCOG00000027339)	KLHL8 (ENSPCOG00000018983)	HSD17B13 (ENSPCOG00000016156)	ENSPCOG00000003550	HSD17B11 (ENSPCOG00000024521)	NUDT9 (ENSPCOG00000028049)	SPARCL1 (ENSPCOG00000023448)	DMP1 (ENSPCOG00000023727)	IBSP (ENSPCOG00000018630)	MEPE (ENSPCOG00000028720)	SPP1 (ENSPCOG00000006026)	PKD2 (ENSPCOG00000019291)
Greater bamboo lemur	MODERN SPECIES	64	LIN54 (ENSPSMG00000018520)	COPS4 (ENSPSMG00000018382)	PLAC8 (ENSPSMG00000018310)	ENSPSMG00000018300	COQ2 (ENSPSMG00000018286)	HPSE (ENSPSMG00000018251)	HELQ (ENSPSMG00000018202)	MRPS18C (ENSPSMG00000018158)	ABRAXAS1 (ENSPSMG00000018130)	GPAT3 (ENSPSMG00000018113)	NKX6-1 (ENSPSMG00000018100)	CDS1 (ENSPSMG00000018082)	WDFY3 (ENSPSMG00000018028)	ENSPSMG00000017913	ARHGAP24 (ENSPSMG00000017866)	ENSPSMG00000017824 #22	MAPK10 (ENSPSMG00000017774)	PTPN13 (ENSPSMG00000017328)	SLC10A6 (ENSPSMG00000016898)	C4orf36 (ENSPSMG00000016893)	AFF1 (ENSPSMG00000016833)	KLHL8 (ENSPSMG00000016695)	HSD17B13 (ENSPSMG00000016633)	HSD17B11 (ENSPSMG00000016611)	NUDT9 (ENSPSMG00000016567)	SPARCL1 (ENSPSMG00000016553)	DSPP (ENSPSMG00000016539)	DMP1 (ENSPSMG00000016501)	IBSP (ENSPSMG00000016491)	ENSPSMG00000016488	MEPE (ENSPSMG00000016484)
Bushbaby	MODERN SPECIES	152	PPP1R3A (ENSOGAG00000005234)	FOXP2 (ENSOGAG00000002833)	ENSOGAG00000027543	MDFIC (ENSOGAG00000002835) #7	TFEC (ENSOGAG00000010066) #10	TES (ENSOGAG00000010070) #11	CAV2 (ENSOGAG00000025779) #12	CAV1 (ENSOGAG00000014265) #13	MET (ENSOGAG00000003961) #14	CAPZA2 (ENSOGAG00000012540) #15	ST7 (ENSOGAG00000013563) #16	WNT2 (ENSOGAG00000013574) #17	ASZ1 (ENSOGAG00000003040) #18	CFTR (ENSOGAG00000001756) #19	CTTNBP2 (ENSOGAG00000001760) #20	LSM8 (ENSOGAG00000013377) #22	ENSOGAG00000006943	ENSOGAG00000025182	ENSOGAG00000027459	KCND2 (ENSOGAG00000031295) #23	TSPAN12 (ENSOGAG00000004209) #24	ING3 (ENSOGAG00000004212) #25	CPED1 (ENSOGAG00000004213) #26	WNT16 (ENSOGAG00000004218) #27	FAM3C (ENSOGAG00000004219) #28	PTPRZ1 (ENSOGAG00000016074) #29	AASS (ENSOGAG00000016086) #30	FEZF1 (ENSOGAG00000002663)	CADPS2 (ENSOGAG00000002665)	RNF133 (ENSOGAG00000002671)	RNF148 (ENSOGAG00000032042)
Laurasiatheria	ANCESTRAL SPECIES	21	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00730000111212 #22
Common shrew	MODERN SPECIES	9477																ENSSARG00000009628 #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Camelidae	ANCESTRAL SPECIES	2	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT01030000234550.a.a.d.a.a	ENSGT00990000210481
Alpaca	MODERN SPECIES	4499																LSM8 (ENSVPAG00000001530) #22
Arabian camel	MODERN SPECIES	33	PPP1R3A (ENSCDRG00005001622)	FOXP2 (ENSCDRG00005001657)	MDFIC (ENSCDRG00005001780) #7	TFEC (ENSCDRG00005001818) #10	TES (ENSCDRG00005001915) #11	ENSCDRG00005001925	CAV2 (ENSCDRG00005001940) #12	CAV1 (ENSCDRG00005001956) #13	MET (ENSCDRG00005001975) #14	CAPZA2 (ENSCDRG00005002005) #15	ST7 (ENSCDRG00005002055) #16	WNT2 (ENSCDRG00005002127) #17	ASZ1 (ENSCDRG00005002142) #18	CFTR (ENSCDRG00005002205) #19	CTTNBP2 (ENSCDRG00005002863) #20	LSM8 (ENSCDRG00005003356) #22	ENSCDRG00005003389	ENSCDRG00005003449	KCND2 (ENSCDRG00005003477) #23	TSPAN12 (ENSCDRG00005003541) #24	ING3 (ENSCDRG00005003592) #25	CPED1 (ENSCDRG00005003698) #26	WNT16 (ENSCDRG00005003896) #27	FAM3C (ENSCDRG00005003932) #28	PTPRZ1 (ENSCDRG00005004019) #29	AASS (ENSCDRG00005004255) #30	FEZF1 (ENSCDRG00005004315)	CADPS2 (ENSCDRG00005004422)	SLC13A1 (ENSCDRG00005004922)	ENSCDRG00005004974	IQUB (ENSCDRG00005004987)
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Pecora	DUPLICATION
Pecora	DUPLICATION
Pecora	ANCESTRAL SPECIES	96																ENSGT00730000111212.i.a #22	ENSGT00940000161777.b
Yarkand deer	MODERN SPECIES	1323	RRAGB (ENSCHYG00000020728)	FOXR2 (ENSCHYG00000020686)	ENSCHYG00000020662	ENSCHYG00000020557	GPR173 (ENSCHYG00000020549)	TSPYL2 (ENSCHYG00000020486)	KANTR (ENSCHYG00000020454)	ENSCHYG00000020423	KDM5C (ENSCHYG00000017975)	IQSEC2 (ENSCHYG00000017227)	SMC1A (ENSCHYG00000016933)	RIBC1 (ENSCHYG00000016704)	HSD17B10 (ENSCHYG00000016557)	ENSCHYG00000016502	HUWE1 (ENSCHYG00000016142)	ENSCHYG00000016027 #22	ENSCHYG00000015970	PHF8 (ENSCHYG00000015566)	ENSCHYG00000015498	ENSCHYG00000015432	FAM120C (ENSCHYG00000015064)	WNK3 (ENSCHYG00000014818)	ENSCHYG00000014706	FGD1 (ENSCHYG00000014503)	GNL3L (ENSCHYG00000014302)	MAGED2 (ENSCHYG00000014061)	ENSCHYG00000014013	PFKFB1 (ENSCHYG00000013428)	APEX2 (ENSCHYG00000013314)	ALAS2 (ENSCHYG00000013150)	ENSCHYG00000013116
Percora_a	ANCESTRAL SPECIES	101																ENSGT00730000111212.i.a #22	ENSGT00940000161777.b
Bovidae	ANCESTRAL SPECIES	102																ENSGT00730000111212.i.a #22	ENSGT00940000161777.b
Bovinae	ANCESTRAL SPECIES	60								ENSGT00940000156821.p.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b	ENSGT00940000153143.a.a.f.e.b.b	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00730000111212.i.a #22	ENSGT00940000161777.b
Bos	ANCESTRAL SPECIES	8	ENSGT00940000156175	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000156821.p.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.a.f.e.a.a.b.b	ENSGT00940000153143.a.a.f.e.a.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b	ENSGT00940000153143.a.a.f.e.b.b	ENSGT00950000185265.d	ENSGT00950000185265.c	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00730000111212.i.a #22	ENSGT00940000161777.b	ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000153305.d.`b.b	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Bos_a	ANCESTRAL SPECIES	12	ENSGT00940000155142	ENSGT00390000011176	ENSGT00940000156175	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00940000156821.p.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.a.f.e.a.a.b.b	ENSGT00940000153143.a.a.f.e.a.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b	ENSGT00950000185265.c	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00730000111212.i.a #22	ENSGT00940000161777.b	ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00990000210481
Wild yak	MODERN SPECIES	362														ENSBMUG00000011929	ENSBMUG00000011918	LSM8 (ENSBMUG00000011907) #22	ENSBMUG00000011893
Bos_b	ANCESTRAL SPECIES	7	ENSGT00940000157866	ENSGT00390000002582	ENSGT00940000157852	ENSGT00940000159695.h	ENSGT00940000155142	ENSGT00390000011176	ENSGT00940000156175	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.a.f.e.a.a.b.b	ENSGT00940000153143.a.a.f.e.a.a.b.a	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00730000111212.i.a #22	ENSGT00550000074794.k.b.a	ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000153305.d.`b.b	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a
Cow	MODERN SPECIES	23	ENSBTAG00000053253	SUGCT (ENSBTAG00000032121)	MPLKIP (ENSBTAG00000018715)	CDK13 (ENSBTAG00000001528)	ENSBTAG00000054825	RALA (ENSBTAG00000006661)	YAE1 (ENSBTAG00000001892)	POU6F2 (ENSBTAG00000013648)	VPS41 (ENSBTAG00000007305)	AMPH (ENSBTAG00000031967)	ENSBTAG00000000144	ENSBTAG00000053474	ENSBTAG00000055254	ENSBTAG00000002859	ENSBTAG00000049399	LSM8 (ENSBTAG00000012649) #22	ENSBTAG00000006152	ENSBTAG00000031464	KCND2 (ENSBTAG00000032077) #23	TSPAN12 (ENSBTAG00000015337) #24	ING3 (ENSBTAG00000016332) #25	CPED1 (ENSBTAG00000002938) #26	WNT16 (ENSBTAG00000002940) #27	FAM3C (ENSBTAG00000007976) #28	PTPRZ1 (ENSBTAG00000012119) #29	AASS (ENSBTAG00000012128) #30	FEZF1 (ENSBTAG00000005103)	CADPS2 (ENSBTAG00000005110)	TAS2R16 (ENSBTAG00000032049)	SLC13A1 (ENSBTAG00000006674)	IQUB (ENSBTAG00000004405)
Hybrid Bos Indicus	MODERN SPECIES	23	ENSBIXG00005020596	ENSBIXG00005020605	ENSBIXG00005020637	ENSBIXG00005003487	ENSBIXG00005020654	ENSBIXG00005020661	ENSBIXG00005020677	ENSBIXG00005020685	ENSBIXG00005020688	ENSBIXG00005020710	ENSBIXG00005020722	ENSBIXG00005020732	ENSBIXG00005020739	ENSBIXG00005003508	ENSBIXG00005020753	LSM8 (ENSBIXG00005007213) #22	ENSBIXG00005020819	ENSBIXG00005020842	ENSBIXG00005020857	KCND2 (ENSBIXG00005020893) #23	TSPAN12 (ENSBIXG00005020981) #24	ENSBIXG00005021009	ING3 (ENSBIXG00005021098) #25	CPED1 (ENSBIXG00005021186) #26	WNT16 (ENSBIXG00005021232) #27	FAM3C (ENSBIXG00005021252) #28	PTPRZ1 (ENSBIXG00005021416) #29	AASS (ENSBIXG00005021503) #30	ENSBIXG00005003630	FEZF1 (ENSBIXG00005000004)	CADPS2 (ENSBIXG00005007840)
American bison	MODERN SPECIES	3079														ENSBBBG00000022660	ENSBBBG00000022653	LSM8 (ENSBBBG00000022649) #22	ENSBBBG00000022640	ENSBBBG00000022631	ENSBBBG00000022622
Siberian musk deer	MODERN SPECIES	257	ENSMMSG00000019123	FOXB1 (ENSMMSG00000019181)	ENSMMSG00000019194	ENSMMSG00000019221	BNIP2 (ENSMMSG00000019237)	GTF2A2 (ENSMMSG00000019278)	GCNT3 (ENSMMSG00000019356)	FAM81A (ENSMMSG00000019367)	MYO1E (ENSMMSG00000019415)	ENSMMSG00000019472	ENSMMSG00000019489	RNF111 (ENSMMSG00000019565)	ENSMMSG00000019602	SLTM (ENSMMSG00000019627)	MINDY2 (ENSMMSG00000019661)	ENSMMSG00000019695 #22	ADAM10 (ENSMMSG00000019713)	LIPC (ENSMMSG00000019830)	AQP9 (ENSMMSG00000019948)	ALDH1A2 (ENSMMSG00000019982)	POLR2M (ENSMMSG00000020150)	MYZAP (ENSMMSG00000020205)	CGNL1 (ENSMMSG00000020305)	TCF12 (ENSMMSG00000020389)	ZNF280D (ENSMMSG00000020750)	MNS1 (ENSMMSG00000020858)	TEX9 (ENSMMSG00000005857)	ENSMMSG00000006005	RFX7 (ENSMMSG00000006029)	NEDD4 (ENSMMSG00000006090)	PRTG (ENSMMSG00000006260)
Pecora	ANCESTRAL SPECIES																	ENSGT00730000111212.i.b #22
Yarkand deer	MODERN SPECIES	9	ENSCHYG00000022441	MPLKIP (ENSCHYG00000022483)	CDK13 (ENSCHYG00000022509)	RALA (ENSCHYG00000022661)	YAE1 (ENSCHYG00000022705)	POU6F2 (ENSCHYG00000022756)	VPS41 (ENSCHYG00000023031)	AMPH (ENSCHYG00000023423)	ENSCHYG00000023515	TRGV9 (ENSCHYG00000023546)	ENSCHYG00000023578	ENSCHYG00000023641	ENSCHYG00000023676	ENSCHYG00000023709	ENSCHYG00000023745	ENSCHYG00000023772 #22	ENSCHYG00000023821	KCND2 (ENSCHYG00000023858) #23	TSPAN12 (ENSCHYG00000023924) #24	ING3 (ENSCHYG00000023988) #25	CPED1 (ENSCHYG00000024149) #26	WNT16 (ENSCHYG00000024300) #27	FAM3C (ENSCHYG00000024340) #28	ENSCHYG00000024383	AASS (ENSCHYG00000026446) #30	FEZF1 (ENSCHYG00000026487)	CADPS2 (ENSCHYG00000026611)	ENSCHYG00000026909	TAS2R16 (ENSCHYG00000026914)	SLC13A1 (ENSCHYG00000026920)	IQUB (ENSCHYG00000026931)
Percora_a	ANCESTRAL SPECIES																	ENSGT00730000111212.i.b #22
Bovidae	ANCESTRAL SPECIES																	ENSGT00730000111212.i.b #22
Caprinae	ANCESTRAL SPECIES	10	ENSGT00940000157866	ENSGT00390000002582	ENSGT00940000157852	ENSGT00940000155142	ENSGT00390000011176	ENSGT00940000156175	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b	ENSGT00940000153143.a.a.f.e.b.b	ENSGT00950000185265	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00730000111212.i.b #22	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326	ENSGT00390000008099
Rambouillet Sheep	MODERN SPECIES	20	SUGCT (ENSOARG00020000282)	MPLKIP (ENSOARG00020000391)	CDK13 (ENSOARG00020000425)	RALA (ENSOARG00020000572)	ENSOARG00020000581	POU6F2 (ENSOARG00020000606)	VPS41 (ENSOARG00020000815)	AMPH (ENSOARG00020001336)	ENSOARG00020001937	ENSOARG00020001954	ENSOARG00020001968	ENSOARG00020001983	ENSOARG00020002001	ENSOARG00020002006	ENSOARG00020002009	LSM8 (ENSOARG00020002018) #22	ENSOARG00020002076	ENSOARG00020002086	KCND2 (ENSOARG00020002102) #23	TSPAN12 (ENSOARG00020002120) #24	ING3 (ENSOARG00020002148) #25	CPED1 (ENSOARG00020002197) #26	WNT16 (ENSOARG00020002230) #27	FAM3C (ENSOARG00020002246) #28	PTPRZ1 (ENSOARG00020002274) #29	AASS (ENSOARG00020002396) #30	FEZF1 (ENSOARG00020002443)	CADPS2 (ENSOARG00020002550)	ENSOARG00020003299	TAS2R16 (ENSOARG00020003346)	SLC13A1 (ENSOARG00020003399)
Goat	MODERN SPECIES	23	INHBA (ENSCHIG00000025901)	SUGCT (ENSCHIG00000017599)	MPLKIP (ENSCHIG00000021871)	ENSCHIG00000022322	CDK13 (ENSCHIG00000022113)	RALA (ENSCHIG00000013549)	YAE1 (ENSCHIG00000016002)	ENSCHIG00000016882	ENSCHIG00000020600	VPS41 (ENSCHIG00000005959)	ENSCHIG00000011903	AMPH (ENSCHIG00000020495)	ENSCHIG00000013794	ENSCHIG00000018076	ENSCHIG00000007301	LSM8 (ENSCHIG00000014201) #22	ENSCHIG00000022010	KCND2 (ENSCHIG00000017913) #23	ENSCHIG00000025503	TSPAN12 (ENSCHIG00000012755) #24	ING3 (ENSCHIG00000009707) #25	CPED1 (ENSCHIG00000007761) #26	WNT16 (ENSCHIG00000016384) #27	FAM3C (ENSCHIG00000026717) #28	PTPRZ1 (ENSCHIG00000017298) #29	AASS (ENSCHIG00000009703) #30	FEZF1 (ENSCHIG00000012204)	CADPS2 (ENSCHIG00000022820)	SLC13A1 (ENSCHIG00000014530)	IQUB (ENSCHIG00000021401)	NDUFA5 (ENSCHIG00000014906)
Siberian musk deer	MODERN SPECIES	86								AMPH (ENSMMSG00000008661)	ENSMMSG00000008617	ENSMMSG00000008601	ENSMMSG00000008592	ENSMMSG00000008575	ENSMMSG00000008519	ENSMMSG00000008499	ENSMMSG00000008472	ENSMMSG00000008438 #22	ENSMMSG00000008402	ENSMMSG00000008377
Pecora	ANCESTRAL SPECIES																	ENSGT00730000111212.j #22
Percora_a	ANCESTRAL SPECIES																	ENSGT00730000111212.j #22
Bovidae	ANCESTRAL SPECIES																	ENSGT00730000111212.j #22
Bovinae	ANCESTRAL SPECIES																	ENSGT00730000111212.j #22
Bos	ANCESTRAL SPECIES																	ENSGT00730000111212.j #22
Bos_a	ANCESTRAL SPECIES																	ENSGT00730000111212.j #22
Domestic yak	MODERN SPECIES	23	RALA (ENSBGRG00000009084)	YAE1 (ENSBGRG00000009045)	POU6F2 (ENSBGRG00000008844)	VPS41 (ENSBGRG00000008270)	AMPH (ENSBGRG00000007825)	ENSBGRG00000007791	ENSBGRG00000007724	ENSBGRG00000007684	ENSBGRG00000007662	ENSBGRG00000007638	ENSBGRG00000007614	ENSBGRG00000007552	ENSBGRG00000007497	ENSBGRG00000007474	ENSBGRG00000007452	ENSBGRG00000007313 #22	ENSBGRG00000026231	ENSBGRG00000026227	ENSBGRG00000026222	ENSBGRG00000026214	KCND2 (ENSBGRG00000026206) #23	TSPAN12 (ENSBGRG00000026203) #24	ENSBGRG00000026200	ING3 (ENSBGRG00000026186) #25	ENSBGRG00000026183	CPED1 (ENSBGRG00000026179) #26	WNT16 (ENSBGRG00000026173) #27	FAM3C (ENSBGRG00000026163) #28	PTPRZ1 (ENSBGRG00000025791) #29	AASS (ENSBGRG00000025745) #30	FEZF1 (ENSBGRG00000025722)
Yarkand deer	MODERN SPECIES	60														ENSCHYG00000019205	ENSCHYG00000019255	ENSCHYG00000019665 #22	ENSCHYG00000019725	ENSCHYG00000019762	ENSCHYG00000019880
Cetacea	ANCESTRAL SPECIES	13	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a.c.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00990000210481	ENSGT00390000014326	ENSGT00390000008099.hb.b
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00390000018696.ab.b	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a.c.a #28	ENSGT01010000229619	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00990000210481
Sperm whale	MODERN SPECIES	16	FOXP2 (ENSPCTG00005000718)	MDFIC (ENSPCTG00005000577) #7	ENSPCTG00005000563	TFEC (ENSPCTG00005000435) #10	TES (ENSPCTG00005000357) #11	CAV2 (ENSPCTG00005000335) #12	ENSPCTG00005000318	CAV1 (ENSPCTG00005000307) #13	MET (ENSPCTG00005000258) #14	CAPZA2 (ENSPCTG00005003893) #15	ST7 (ENSPCTG00005003837) #16	WNT2 (ENSPCTG00005003803) #17	ASZ1 (ENSPCTG00005003795) #18	CFTR (ENSPCTG00005003550) #19	CTTNBP2 (ENSPCTG00005003446) #20	LSM8 (ENSPCTG00005003422) #22	ENSPCTG00005003384	ENSPCTG00005003369 #23	ENSPCTG00005003353	TSPAN12 (ENSPCTG00005003339) #24	ING3 (ENSPCTG00005003320) #25	CPED1 (ENSPCTG00005003296) #26	WNT16 (ENSPCTG00005003279) #27	FAM3C (ENSPCTG00005003260) #28	ENSPCTG00005003246	PTPRZ1 (ENSPCTG00005003179) #29	AASS (ENSPCTG00005003140) #30	FEZF1 (ENSPCTG00005003111)	CADPS2 (ENSPCTG00005002800)	SLC13A1 (ENSPCTG00005002663)	ENSPCTG00005002648
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00390000018696.ab.b	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a.c.a #28	ENSGT01010000229619	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00990000210481
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00390000018696.ab.b	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a.c.a #28	ENSGT01010000229619	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000162417.B	ENSGT01030000234550.a.a.d.a.a
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00390000018696.ab.b	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a.c.a #28	ENSGT00390000002517.a.b.b.c.b.b	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000162417.B	ENSGT01030000234550.a.a.d.a.a
Narwhal	MODERN SPECIES	306	FOXP2 (ENSMMNG00015006660)	MDFIC (ENSMMNG00015006992) #7	ENSMMNG00015007012	TFEC (ENSMMNG00015007059) #10	TES (ENSMMNG00015007124) #11	CAV2 (ENSMMNG00015007157) #12	CAV1 (ENSMMNG00015007169) #13	MET (ENSMMNG00015007208) #14	CAPZA2 (ENSMMNG00015007277) #15	ST7 (ENSMMNG00015007638) #16	ENSMMNG00015008101	WNT2 (ENSMMNG00015008114) #17	ASZ1 (ENSMMNG00015008132) #18	CFTR (ENSMMNG00015008191) #19	CTTNBP2 (ENSMMNG00015008242) #20	LSM8 (ENSMMNG00015008300) #22	ENSMMNG00015008326	KCND2 (ENSMMNG00015008351) #23	ENSMMNG00015008364	TSPAN12 (ENSMMNG00015008372) #24	ING3 (ENSMMNG00015008385) #25	CPED1 (ENSMMNG00015008430) #26	WNT16 (ENSMMNG00015008481) #27	ENSMMNG00015008492 #28	ENSMMNG00015008511	PTPRZ1 (ENSMMNG00015008685) #29	AASS (ENSMMNG00015008962) #30	ENSMMNG00015008989	FEZF1 (ENSMMNG00015009003)	CADPS2 (ENSMMNG00015009046)	ENSMMNG00015009100
Beluga whale	MODERN SPECIES	72	FOXP2 (ENSDLEG00000010860)	MDFIC (ENSDLEG00000010705) #7	ENSDLEG00000010692	TFEC (ENSDLEG00000010641) #10	TES (ENSDLEG00000010623) #11	CAV2 (ENSDLEG00000010616) #12	CAV1 (ENSDLEG00000010596) #13	MET (ENSDLEG00000010515) #14	CAPZA2 (ENSDLEG00000010489) #15	ST7 (ENSDLEG00000010402) #16	WNT2 (ENSDLEG00000010382) #17	ENSDLEG00000010374	ASZ1 (ENSDLEG00000010228) #18	CFTR (ENSDLEG00000009386) #19	CTTNBP2 (ENSDLEG00000009204) #20	LSM8 (ENSDLEG00000009162) #22	ENSDLEG00000009082	ENSDLEG00000009057 #23	ENSDLEG00000009040	TSPAN12 (ENSDLEG00000009002) #24	ING3 (ENSDLEG00000008957) #25	CPED1 (ENSDLEG00000008806) #26	WNT16 (ENSDLEG00000008763) #27	ENSDLEG00000008725 #28	ENSDLEG00000008697	PTPRZ1 (ENSDLEG00000008502) #29	ENSDLEG00000008472	AASS (ENSDLEG00000008185) #30	FEZF1 (ENSDLEG00000008135)	CADPS2 (ENSDLEG00000007974)	SLC13A1 (ENSDLEG00000013207)
Vaquita	MODERN SPECIES	20	FOXP2 (ENSPSNG00000008393)	MDFIC (ENSPSNG00000008245) #7	ENSPSNG00000008210	TFEC (ENSPSNG00000008020) #10	TES (ENSPSNG00000007868) #11	CAV2 (ENSPSNG00000007812) #12	CAV1 (ENSPSNG00000007757) #13	MET (ENSPSNG00000007686) #14	CAPZA2 (ENSPSNG00000007567) #15	ST7 (ENSPSNG00000007232) #16	WNT2 (ENSPSNG00000007074) #17	ASZ1 (ENSPSNG00000006996) #18	CFTR (ENSPSNG00000006540) #19	ENSPSNG00000006366	CTTNBP2 (ENSPSNG00000006336) #20	LSM8 (ENSPSNG00000006282) #22	ENSPSNG00000006207	ENSPSNG00000006167	KCND2 (ENSPSNG00000006128) #23	TSPAN12 (ENSPSNG00000006100) #24	ING3 (ENSPSNG00000006054) #25	CPED1 (ENSPSNG00000006017) #26	WNT16 (ENSPSNG00000005981) #27	FAM3C (ENSPSNG00000005949) #28	ENSPSNG00000005910	PTPRZ1 (ENSPSNG00000005040) #29	AASS (ENSPSNG00000004701) #30	FEZF1 (ENSPSNG00000004653)	CADPS2 (ENSPSNG00000004337)	ENSPSNG00000004162	ENSPSNG00000020858
Dolphin	MODERN SPECIES	3850																LSM8 (ENSTTRG00000001023) #22
Blue whale	MODERN SPECIES	20	FOXP2 (ENSBMSG00010007623)	MDFIC (ENSBMSG00010007534) #7	ENSBMSG00010007525	TFEC (ENSBMSG00010007456) #10	ENSBMSG00010007423	TES (ENSBMSG00010007413) #11	CAV2 (ENSBMSG00010007399) #12	CAV1 (ENSBMSG00010007383) #13	MET (ENSBMSG00010007360) #14	CAPZA2 (ENSBMSG00010007309) #15	ST7 (ENSBMSG00010007217) #16	WNT2 (ENSBMSG00010007149) #17	ASZ1 (ENSBMSG00010007122) #18	CFTR (ENSBMSG00010007097) #19	CTTNBP2 (ENSBMSG00010007046) #20	LSM8 (ENSBMSG00010007016) #22	ENSBMSG00010006964	ENSBMSG00010006935	KCND2 (ENSBMSG00010006920) #23	TSPAN12 (ENSBMSG00010006907) #24	ING3 (ENSBMSG00010006892) #25	CPED1 (ENSBMSG00010006795) #26	WNT16 (ENSBMSG00010006732) #27	ENSBMSG00010006715 #28	PTPRZ1 (ENSBMSG00010006646) #29	AASS (ENSBMSG00010006576) #30	CADPS2 (ENSBMSG00010006309)	ENSBMSG00010006242	TAS2R16 (ENSBMSG00010006234)	SLC13A1 (ENSBMSG00010006206)	ENSBMSG00010006184
Suina	ANCESTRAL SPECIES	19	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Chacoan peccary	MODERN SPECIES	72																LSM8 (ENSCWAG00000000714) #22	ENSCWAG00000000745	KCND2 (ENSCWAG00000000757) #23	TSPAN12 (ENSCWAG00000000779) #24	ING3 (ENSCWAG00000000811) #25	CPED1 (ENSCWAG00000000900) #26	WNT16 (ENSCWAG00000001054) #27	FAM3C (ENSCWAG00000001074) #28	ENSCWAG00000001100	PTPRZ1 (ENSCWAG00000001255) #29	AASS (ENSCWAG00000002749) #30	ENSCWAG00000002779	FEZF1 (ENSCWAG00000002791)	CADPS2 (ENSCWAG00000002856)	TAS2R16 (ENSCWAG00000003208)	SLC13A1 (ENSCWAG00000003215)
Pig	MODERN SPECIES	9	PPP1R3A (ENSSSCG00000016640)	FOXP2 (ENSSSCG00000016639)	MDFIC (ENSSSCG00000021885) #7	TFEC (ENSSSCG00000038138) #10	TES (ENSSSCG00000040344) #11	CAV2 (ENSSSCG00000016635) #12	CAV1 (ENSSSCG00000016634) #13	MET (ENSSSCG00000024351) #14	CAPZA2 (ENSSSCG00000028113) #15	ST7 (ENSSSCG00000016629) #16	WNT2 (ENSSSCG00000016628) #17	ASZ1 (ENSSSCG00000016627) #18	CFTR (ENSSSCG00000016626) #19	CTTNBP2 (ENSSSCG00000016625) #20	ENSSSCG00000050786	LSM8 (ENSSSCG00000021652) #22	ENSSSCG00000016623	ENSSSCG00000048258	ENSSSCG00000063110	ENSSSCG00000062673	KCND2 (ENSSSCG00000016621) #23	TSPAN12 (ENSSSCG00000016620) #24	ING3 (ENSSSCG00000016619) #25	CPED1 (ENSSSCG00000016618) #26	WNT16 (ENSSSCG00000016617) #27	FAM3C (ENSSSCG00000016616) #28	PTPRZ1 (ENSSSCG00000016614) #29	AASS (ENSSSCG00000016613) #30	FEZF1 (ENSSSCG00000031221)	CADPS2 (ENSSSCG00000016611)	TAS2R16 (ENSSSCG00000037368)
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382	ENSGT01100000263477.B.d.b
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163928	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b
Chiroptera	ANCESTRAL SPECIES	41	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163928	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b
Megabat	MODERN SPECIES	3650														CFTR (ENSPVAG00000000987) #19	CTTNBP2 (ENSPVAG00000000989) #20	LSM8 (ENSPVAG00000000990) #22	ENSPVAG00000000992
Microchiroptera	ANCESTRAL SPECIES	23	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163928	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1230										ENSMLUG00000010218	ENSMLUG00000012244 #19	ENSMLUG00000029285	ENSMLUG00000027669 #20	ENSMLUG00000005598 #20	ENSMLUG00000025631	ENSMLUG00000006837 #22	ENSMLUG00000016140	ENSMLUG00000030553
Microbat	MODERN SPECIES	943	ACTR2 (ENSMLUG00000005227)	RAB1A (ENSMLUG00000009489)	CEP68 (ENSMLUG00000002435)	SLC1A4 (ENSMLUG00000002430)	SERTAD2 (ENSMLUG00000013854)	AFTPH (ENSMLUG00000008012)	LGALSL (ENSMLUG00000008001)	ENSMLUG00000015944	PELI1 (ENSMLUG00000003152)	VPS54 (ENSMLUG00000003130)	UGP2 (ENSMLUG00000003123)	MDH1 (ENSMLUG00000002352)	WDPCP (ENSMLUG00000002336)	OTX1 (ENSMLUG00000002330)	EHBP1 (ENSMLUG00000002314)	ENSMLUG00000027762 #22	B3GNT2 (ENSMLUG00000009924)	ENSMLUG00000022697	CCT4 (ENSMLUG00000016138)	FAM161A (ENSMLUG00000030514)	XPO1 (ENSMLUG00000010670)	USP34 (ENSMLUG00000003414)	ENSMLUG00000027445	ENSMLUG00000003408	C2orf74 (ENSMLUG00000027969)	SANBR (ENSMLUG00000007627)	PEX13 (ENSMLUG00000025131)	PUS10 (ENSMLUG00000000082)	REL (ENSMLUG00000007454)	PAPOLG (ENSMLUG00000009853)	ENSMLUG00000014903
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	18	FOXP2 (ENSRFEG00010019612)	MDFIC (ENSRFEG00010019544) #7	TFEC (ENSRFEG00010019376) #10	ENSRFEG00010019318	TES (ENSRFEG00010019300) #11	CAV2 (ENSRFEG00010019273) #12	CAV1 (ENSRFEG00010019224) #13	MET (ENSRFEG00010019152) #14	CAPZA2 (ENSRFEG00010019032) #15	ST7 (ENSRFEG00010018747) #16	WNT2 (ENSRFEG00010018681) #17	ASZ1 (ENSRFEG00010018560) #18	ENSRFEG00010018517	CFTR (ENSRFEG00010017672) #19	CTTNBP2 (ENSRFEG00010017601) #20	ENSRFEG00010017515 #22	ENSRFEG00010017376	ENSRFEG00010017356	ENSRFEG00010017340	KCND2 (ENSRFEG00010017250) #23	TSPAN12 (ENSRFEG00010017208) #24	ING3 (ENSRFEG00010017054) #25	CPED1 (ENSRFEG00010016992) #26	WNT16 (ENSRFEG00010016926) #27	FAM3C (ENSRFEG00010016879) #28	PTPRZ1 (ENSRFEG00010016626) #29	AASS (ENSRFEG00010016545) #30	FEZF1 (ENSRFEG00010016383)	RNF133 (ENSRFEG00010016316)	CADPS2 (ENSRFEG00010015967)	TAS2R16 (ENSRFEG00010015907)
Greater horseshoe bat	MODERN SPECIES	18	CAPZA2 (ENSRFEG00010019032) #15	MET (ENSRFEG00010019152) #14	CAV1 (ENSRFEG00010019224) #13	CAV2 (ENSRFEG00010019273) #12	TES (ENSRFEG00010019300) #11	ENSRFEG00010019318	TFEC (ENSRFEG00010019376) #10	MDFIC (ENSRFEG00010019544) #7	FOXP2 (ENSRFEG00010019612)	PPP1R3A (ENSRFEG00010019863)	ENSRFEG00010019896	SMIM30 (ENSRFEG00010019921)	GPR85 (ENSRFEG00010019929)	BMT2 (ENSRFEG00010019948)	TMEM168 (ENSRFEG00010019981)	ENSRFEG00010020008 #22
Equus	ANCESTRAL SPECIES	13	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01100000263477.B.d.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326	ENSGT00390000008099
Donkey	MODERN SPECIES		SMIM30 (ENSEASG00005004307)	PPP1R3A (ENSEASG00005008800)	FOXP2 (ENSEASG00005008813)	MDFIC (ENSEASG00005025429) #7	TFEC (ENSEASG00005036487) #10	TES (ENSEASG00005008832) #11	ENSEASG00005034179 #12	CAV1 (ENSEASG00005030696) #13	MET (ENSEASG00005008840) #14	CAPZA2 (ENSEASG00005008845) #15	ST7 (ENSEASG00005008859) #16	WNT2 (ENSEASG00005008889) #17	ASZ1 (ENSEASG00005008894) #18	CFTR (ENSEASG00005008909) #19	CTTNBP2 (ENSEASG00005008929) #20	LSM8 (ENSEASG00005027658) #22	ENSEASG00005008937	KCND2 (ENSEASG00005008938) #23	TSPAN12 (ENSEASG00005008941) #24	ING3 (ENSEASG00005008942) #25	ENSEASG00005028595 #26	ENSEASG00005008958 #26	WNT16 (ENSEASG00005008977) #27	FAM3C (ENSEASG00005008980) #28	PTPRZ1 (ENSEASG00005008993) #29	AASS (ENSEASG00005009016) #30	FEZF1 (ENSEASG00005009026)	CADPS2 (ENSEASG00005009041)	TAS2R16 (ENSEASG00005009304)	SLC13A1 (ENSEASG00005009316)	IQUB (ENSEASG00005009328)
Horse	MODERN SPECIES	25	FOXP2 (ENSECAG00000023867)	MDFIC (ENSECAG00000013772) #7	TFEC (ENSECAG00000013937) #10	TES (ENSECAG00000016917) #11	CAV2 (ENSECAG00000037857) #12	CAV1 (ENSECAG00000009134) #13	MET (ENSECAG00000010385) #14	CAPZA2 (ENSECAG00000021693) #15	ST7 (ENSECAG00000008375) #16	ENSECAG00000059035	WNT2 (ENSECAG00000024641) #17	ENSECAG00000043879	ASZ1 (ENSECAG00000011002) #18	CFTR (ENSECAG00000009139) #19	CTTNBP2 (ENSECAG00000025076) #20	LSM8 (ENSECAG00000024025) #22	KCND2 (ENSECAG00000002703) #23	TSPAN12 (ENSECAG00000001545) #24	ING3 (ENSECAG00000008147) #25	CPED1 (ENSECAG00000017094) #26	FAM3C (ENSECAG00000008527) #28	WNT16 (ENSECAG00000006880) #27	PTPRZ1 (ENSECAG00000011293) #29	AASS (ENSECAG00000021479) #30	FEZF1 (ENSECAG00000022989)	CADPS2 (ENSECAG00000024021)	SLC13A1 (ENSECAG00000020615)	IQUB (ENSECAG00000005249)	ASB15 (ENSECAG00000011379)	LMOD2 (ENSECAG00000057098)	WASL (ENSECAG00000015578)
Carnivora	ANCESTRAL SPECIES	15	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00390000007479.y.b	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163928	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01030000234550.a.a.d.a.a
Felidae	ANCESTRAL SPECIES	13	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00390000007479.y.b	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00390000015224.c.b.b.a.b.a	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01030000234550.a.a.d.a.a
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00900000143058	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00390000015224.c.b.b.a.b.a	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01030000234550.a.a.d.a.a
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00900000143058	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00390000015224.c.b.b.a.b.a	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163382	ENSGT01030000234550.a.a.d.a.a
leopard	MODERN SPECIES	72	FOXP2 (ENSPPRG00000000808)	MDFIC (ENSPPRG00000000981) #7	TFEC (ENSPPRG00000001348) #10	TES (ENSPPRG00000001505) #11	CAV2 (ENSPPRG00000001790) #12	CAV1 (ENSPPRG00000001995) #13	ENSPPRG00000002566	ENSPPRG00000018383 #14	CAPZA2 (ENSPPRG00000002625) #15	ST7 (ENSPPRG00000004797) #16	WNT2 (ENSPPRG00000005517) #17	ASZ1 (ENSPPRG00000005580) #18	CFTR (ENSPPRG00000005895) #19	ENSPPRG00000005928	CTTNBP2 (ENSPPRG00000006253) #20	LSM8 (ENSPPRG00000006444) #22	ENSPPRG00000006566
lion	MODERN SPECIES	2	SMIM30 (ENSPLOG00000002985)	PPP1R3A (ENSPLOG00000003004)	FOXP2 (ENSPLOG00000003059)	MDFIC (ENSPLOG00000003217) #7	TFEC (ENSPLOG00000003253) #10	TES (ENSPLOG00000003361) #11	CAV2 (ENSPLOG00000003376) #12	CAV1 (ENSPLOG00000003388) #13	ENSPLOG00000003404	CAPZA2 (ENSPLOG00000003487) #15	ST7 (ENSPLOG00000003747) #16	WNT2 (ENSPLOG00000004225) #17	ASZ1 (ENSPLOG00000004231) #18	CFTR (ENSPLOG00000004296) #19	CTTNBP2 (ENSPLOG00000004483) #20	LSM8 (ENSPLOG00000004510) #22	ENSPLOG00000004527	ENSPLOG00000004535	ENSPLOG00000004539	KCND2 (ENSPLOG00000004548) #23	TSPAN12 (ENSPLOG00000004557) #24	ING3 (ENSPLOG00000004574) #25	CPED1 (ENSPLOG00000004600) #26	WNT16 (ENSPLOG00000004662) #27	FAM3C (ENSPLOG00000004694) #28	PTPRZ1 (ENSPLOG00000004914) #29	AASS (ENSPLOG00000005333) #30	FEZF1 (ENSPLOG00000005395)	CADPS2 (ENSPLOG00000005636)	SLC13A1 (ENSPLOG00000006227)	ENSPLOG00000006309
Tiger	MODERN SPECIES	296	FOXP2 (ENSPTIG00000005044)	MDFIC (ENSPTIG00000017402) #7	TFEC (ENSPTIG00000018257) #10	TES (ENSPTIG00000021347) #11	CAV2 (ENSPTIG00000021626) #12	CAV1 (ENSPTIG00000021784) #13	ENSPTIG00000021973	ENSPTIG00000002142 #14	CAPZA2 (ENSPTIG00000022058) #15	ST7 (ENSPTIG00000022098) #16	WNT2 (ENSPTIG00000014444) #17	ASZ1 (ENSPTIG00000014931) #18	CFTR (ENSPTIG00000017030) #19	ENSPTIG00000017786	CTTNBP2 (ENSPTIG00000019650) #20	LSM8 (ENSPTIG00000004722) #22	ENSPTIG00000005580	KCND2 (ENSPTIG00000006572) #23	TSPAN12 (ENSPTIG00000007270) #24	ING3 (ENSPTIG00000008202) #25	CPED1 (ENSPTIG00000010438) #26	WNT16 (ENSPTIG00000013116) #27	FAM3C (ENSPTIG00000014410) #28	PTPRZ1 (ENSPTIG00000014785) #29	AASS (ENSPTIG00000020365) #30	FEZF1 (ENSPTIG00000006097)	CADPS2 (ENSPTIG00000008072)	ENSPTIG00000019227	SLC13A1 (ENSPTIG00000019436)	IQUB (ENSPTIG00000020106)	NDUFA5 (ENSPTIG00000021225)
Cat	MODERN SPECIES	1	PPP1R3A (ENSFCAG00000026838)	FOXP2 (ENSFCAG00000006921)	MDFIC (ENSFCAG00000046079) #7	TFEC (ENSFCAG00000027627) #10	TES (ENSFCAG00000029911) #11	CAV2 (ENSFCAG00000023324) #12	CAV1 (ENSFCAG00000034785) #13	MET (ENSFCAG00000009534) #14	CAPZA2 (ENSFCAG00000027103) #15	ST7 (ENSFCAG00000013253) #16	WNT2 (ENSFCAG00000036421) #17	ASZ1 (ENSFCAG00000023842) #18	CFTR (ENSFCAG00000014955) #19	CTTNBP2 (ENSFCAG00000014956) #20	ENSFCAG00000032304	LSM8 (ENSFCAG00000036620) #22	ENSFCAG00000031973	ENSFCAG00000047748	ENSFCAG00000038564	KCND2 (ENSFCAG00000007877) #23	TSPAN12 (ENSFCAG00000023943) #24	ING3 (ENSFCAG00000029472) #25	CPED1 (ENSFCAG00000023648) #26	FAM3C (ENSFCAG00000023087) #28	WNT16 (ENSFCAG00000029148) #27	ENSFCAG00000030800	PTPRZ1 (ENSFCAG00000015760) #29	AASS (ENSFCAG00000029895) #30	FEZF1 (ENSFCAG00000013521)	CADPS2 (ENSFCAG00000000574)	SLC13A1 (ENSFCAG00000013589)
Caniformia	ANCESTRAL SPECIES	11	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00390000007479.y.b	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163928	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00390000007479.y.b.a	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000153661.b.b.m	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00390000007479.y.b.a	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000153661.b.b.m	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Ferret	MODERN SPECIES	168	PPP1R3A (ENSMPUG00000007681)	FOXP2 (ENSMPUG00000007316)	MDFIC (ENSMPUG00000007309) #7	ENSMPUG00000007300	TFEC (ENSMPUG00000007248) #10	TES (ENSMPUG00000007238) #11	CAV2 (ENSMPUG00000007232) #12	CAV1 (ENSMPUG00000007224) #13	MET (ENSMPUG00000007199) #14	ST7 (ENSMPUG00000007184) #16	WNT2 (ENSMPUG00000007172) #17	ASZ1 (ENSMPUG00000007155) #18	CFTR (ENSMPUG00000007138) #19	CTTNBP2 (ENSMPUG00000007124) #20	ENSMPUG00000007110	ENSMPUG00000007100 #22	ENSMPUG00000007093	ENSMPUG00000007078	KCND2 (ENSMPUG00000007070) #23	ENSMPUG00000007063	TSPAN12 (ENSMPUG00000007059) #24	ING3 (ENSMPUG00000007054) #25	CPED1 (ENSMPUG00000006988) #26	WNT16 (ENSMPUG00000006909) #27	FAM3C (ENSMPUG00000006897) #28	PTPRZ1 (ENSMPUG00000006874) #29	AASS (ENSMPUG00000006862) #30	FEZF1 (ENSMPUG00000006851)	CADPS2 (ENSMPUG00000006834)	SLC13A1 (ENSMPUG00000006826)	IQUB (ENSMPUG00000006817)
American mink	MODERN SPECIES	3	PPP1R3A (ENSNVIG00000003288)	FOXP2 (ENSNVIG00000002817)	MDFIC (ENSNVIG00000002794) #7	TFEC (ENSNVIG00000002689) #10	TES (ENSNVIG00000002631) #11	CAV2 (ENSNVIG00000002622) #12	CAV1 (ENSNVIG00000002597) #13	ENSNVIG00000002563	ENSNVIG00000002532 #14	CAPZA2 (ENSNVIG00000002498) #15	ST7 (ENSNVIG00000002263) #16	WNT2 (ENSNVIG00000002216) #17	ASZ1 (ENSNVIG00000002205) #18	CFTR (ENSNVIG00000002052) #19	CTTNBP2 (ENSNVIG00000002011) #20	LSM8 (ENSNVIG00000001976) #22	ENSNVIG00000001960	ENSNVIG00000001954	KCND2 (ENSNVIG00000001932) #23	TSN12 (ENSNVIG00000001909) #24	ING3 (ENSNVIG00000001859) #25	CPED1 (ENSNVIG00000001760) #26	WNT16 (ENSNVIG00000001731) #27	FAM3C (ENSNVIG00000001700) #28	PTPRZ1 (ENSNVIG00000001621) #29	AASS (ENSNVIG00000001583) #30	FEZF1 (ENSNVIG00000001557)	ENSNVIG00000001541	CADPS2 (ENSNVIG00000001278)	SLC13A1 (ENSNVIG00000001237)	IQUB (ENSNVIG00000001202)
Ursidae	ANCESTRAL SPECIES	12	ENSGT00400000023684	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685.c #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00490000043329.a.a.a.pb.c.b	ENSGT01020000230614	ENSGT00940000155472.a.a #23	ENSGT01010000229956	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a
Ursus	ANCESTRAL SPECIES	82					ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293.i #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00490000043329.a.a.a.pb.c.b	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326	ENSGT00390000008099	ENSGT00940000157073
American black bear	DUPLICATION
American black bear	MODERN SPECIES	2339															ENSUAMG00000006942 #22	ENSUAMG00000006943 #22	ENSUAMG00000006945
American black bear	MODERN SPECIES	2339														ENSUAMG00000006945	ENSUAMG00000006943 #22	ENSUAMG00000006942 #22
Polar bear	MODERN SPECIES	281					TFEC (ENSUMAG00000002162) #10	TES (ENSUMAG00000002178) #11	ENSUMAG00000002184 #12	CAV1 (ENSUMAG00000002191) #13	MET (ENSUMAG00000002307) #14	CAPZA2 (ENSUMAG00000002886) #15	ST7 (ENSUMAG00000002912) #16	WNT2 (ENSUMAG00000002965) #17	ASZ1 (ENSUMAG00000002973) #18	CFTR (ENSUMAG00000003001) #19	CTTNBP2 (ENSUMAG00000003029) #20	LSM8 (ENSUMAG00000003073) #22	ENSUMAG00000003079	ENSUMAG00000003108	ENSUMAG00000003110	TSPAN12 (ENSUMAG00000003123) #24	ING3 (ENSUMAG00000003142) #25	CPED1 (ENSUMAG00000003165) #26	WNT16 (ENSUMAG00000003225) #27	FAM3C (ENSUMAG00000003239) #28	PTPRZ1 (ENSUMAG00000003260) #29	AASS (ENSUMAG00000003535) #30	FEZF1 (ENSUMAG00000004731)	CADPS2 (ENSUMAG00000004849)	ENSUMAG00000005539	IQUB (ENSUMAG00000005549)	ENSUMAG00000005561
Giant Panda	MODERN SPECIES		SMIM30 (ENSAMEG00000019099)	PPP1R3A (ENSAMEG00000002577)	FOXP2 (ENSAMEG00000002526)	MDFIC (ENSAMEG00000027010) #7	TFEC (ENSAMEG00000018238) #10	TES (ENSAMEG00000018237) #11	CAV2 (ENSAMEG00000029109) #12	CAV1 (ENSAMEG00000027933) #13	MET (ENSAMEG00000001314) #14	CAPZA2 (ENSAMEG00000001306) #15	ST7 (ENSAMEG00000001267) #16	WNT2 (ENSAMEG00000001256) #17	ASZ1 (ENSAMEG00000001244) #18	CFTR (ENSAMEG00000001184) #19	CTTNBP2 (ENSAMEG00000001163) #20	LSM8 (ENSAMEG00000001162) #22	ENSAMEG00000001159	ENSAMEG00000027977	ENSAMEG00000031336	KCND2 (ENSAMEG00000020256) #23	ENSAMEG00000029289	TSPAN12 (ENSAMEG00000005955) #24	ING3 (ENSAMEG00000005975) #25	CPED1 (ENSAMEG00000006006) #26	WNT16 (ENSAMEG00000006022) #27	FAM3C (ENSAMEG00000006035) #28	PTPRZ1 (ENSAMEG00000004272) #29	AASS (ENSAMEG00000004321) #30	FEZF1 (ENSAMEG00000004386)	CADPS2 (ENSAMEG00000004390)	SLC13A1 (ENSAMEG00000004466)
Canidae	ANCESTRAL SPECIES	52	ENSGT00410000028909	ENSGT00940000156579	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d	ENSGT00940000156369	ENSGT00940000160670	ENSGT00390000009048.a.b	ENSGT00390000005782	ENSGT00530000064469	ENSGT00940000157592	ENSGT00390000001830.j	ENSGT00940000157299	ENSGT00940000156973	ENSGT00730000111212 #22	ENSGT00940000154997	ENSGT00940000154585.a	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000165378	ENSGT00940000159623	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873
Red fox	MODERN SPECIES	11	FAM174A (ENSVVUG00000020104)	ST8SIA4 (ENSVVUG00000020099)	SLCO4C1 (ENSVVUG00000020047)	ENSVVUG00000020035	SLCO6A1 (ENSVVUG00000020025)	PAM (ENSVVUG00000019687)	GIN1 (ENSVVUG00000019618)	PPIP5K2 (ENSVVUG00000013495)	CUNH5orf30 (ENSVVUG00000013357)	ENSVVUG00000013337	NUDT12 (ENSVVUG00000013331)	ENSVVUG00000013325	ENSVVUG00000013293	ENSVVUG00000013288	EFNA5 (ENSVVUG00000013271)	ENSVVUG00000013248 #22	ENSVVUG00000013246	ENSVVUG00000013220	FER (ENSVVUG00000013141)	PJA2 (ENSVVUG00000013092)	MAN2A1 (ENSVVUG00000013038)	ENSVVUG00000013011	TMEM232 (ENSVVUG00000012986)	SLC25A46 (ENSVVUG00000012972)	TSLP (ENSVVUG00000012958)	WDR36 (ENSVVUG00000012684)	CAMK4 (ENSVVUG00000012620)	STARD4 (ENSVVUG00000012606)	EPB41L4A (ENSVVUG00000012521)	APC (ENSVVUG00000012447)	SRP19 (ENSVVUG00000012423)
Canis_lupus	DUPLICATION
Canis_lupus	DUPLICATION
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00940000156579	ENSGT00390000017282.o	ENSGT00730000111385	ENSGT01030000234535.F.b	ENSGT01080000257410.D.c	ENSGT01080000257410.D.d	ENSGT00940000156369	ENSGT00940000160670	ENSGT00390000009048.a.b	ENSGT00390000005782	ENSGT00530000064469	ENSGT00940000157592	ENSGT00390000001830.j	ENSGT00940000157299	ENSGT00940000156973	ENSGT00730000111212.q.a #22	ENSGT00940000154997	ENSGT00940000154585.a	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00390000012541	ENSGT00940000153662.B	ENSGT00940000160006	ENSGT00940000159243	ENSGT00390000016521	ENSGT00940000165378	ENSGT00940000159623	ENSGT00530000063749.c.b	ENSGT00390000004950.hb.a	ENSGT00940000157873
Dingo	MODERN SPECIES	138	PAM (ENSCAFG00020012061)	GIN1 (ENSCAFG00020012078)	PPIP5K2 (ENSCAFG00020012160)	MACIR (ENSCAFG00020012590)	ENSCAFG00020012597	ENSCAFG00020012606	NUDT12 (ENSCAFG00020012607)	ENSCAFG00020012617	ENSCAFG00020012622	ENSCAFG00020012646	ENSCAFG00020012662	ENSCAFG00020012690	ENSCAFG00020012708	EFNA5 (ENSCAFG00020012730)	FBXL17 (ENSCAFG00020012795)	ENSCAFG00020012800 #22	ENSCAFG00020012804	ENSCAFG00020012810	FER (ENSCAFG00020012851)	PJA2 (ENSCAFG00020012927)	MAN2A1 (ENSCAFG00020012979)	TMEM232 (ENSCAFG00020013399)	SLC25A46 (ENSCAFG00020013422)	TSLP (ENSCAFG00020013428)	WDR36 (ENSCAFG00020013444)	CAMK4 (ENSCAFG00020013830)	STARD4 (ENSCAFG00020014160)	ENSCAFG00020014167	EPB41L4A (ENSCAFG00020014184)	APC (ENSCAFG00020014204)	ENSCAFG00020014267
Dog	MODERN SPECIES	22	CHD1 (ENSCAFG00845002210)	ENSCAFG00845002178	FAM174A (ENSCAFG00845002170)	ST8SIA4 (ENSCAFG00845002101)	SLCO4C1 (ENSCAFG00845002027)	SLCO6A1 (ENSCAFG00845001964)	PAM (ENSCAFG00845001601)	GIN1 (ENSCAFG00845001384)	PPIP5K2 (ENSCAFG00845001037)	MACIR (ENSCAFG00845000857)	ENSCAFG00845000832	NUDT12 (ENSCAFG00845000770)	ENSCAFG00845000704	ENSCAFG00845000582	EFNA5 (ENSCAFG00845000512)	LSM8 (ENSCAFG00845000484) #22	FBXL17 (ENSCAFG00845000464)	FER (ENSCAFG00845000339)	PJA2 (ENSCAFG00845000212)	MAN2A1 (ENSCAFG00845004163)	TMEM232 (ENSCAFG00845003944)	SLC25A46 (ENSCAFG00845003894)	ENSCAFG00845003872	WDR36 (ENSCAFG00845003859)	CAMK4 (ENSCAFG00845003821)	STARD4 (ENSCAFG00845003796)	NREP (ENSCAFG00845003745)	ENSCAFG00845003705	EPB41L4A (ENSCAFG00845003607)	APC (ENSCAFG00845003519)	SRP19 (ENSCAFG00845003444)
Canis_lupus	ANCESTRAL SPECIES	24	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022.a #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212.q.b #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216.q.a #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00940000163928	ENSGT00940000163382	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326
Dingo	MODERN SPECIES	288	ENSCAFG00020007266	MDFIC (ENSCAFG00020007307) #7	ENSCAFG00020007316	TFEC (ENSCAFG00020007323) #10	TES (ENSCAFG00020007337) #11	ENSCAFG00020007342	CAV2 (ENSCAFG00020007355) #12	CAV1 (ENSCAFG00020007358) #13	MET (ENSCAFG00020007371) #14	CAPZA2 (ENSCAFG00020007382) #15	ST7 (ENSCAFG00020007405) #16	WNT2 (ENSCAFG00020007444) #17	ASZ1 (ENSCAFG00020007449) #18	CFTR (ENSCAFG00020007486) #19	CTTNBP2 (ENSCAFG00020007530) #20	ENSCAFG00020007643 #22	ENSCAFG00020007647	ENSCAFG00020007658	TSPAN12 (ENSCAFG00020007671) #24	ENSCAFG00020007677 #25	ENSCAFG00020007679 #26
Canis_lupus	ANCESTRAL SPECIES																	ENSGT00730000111212.r #22
Dog	MODERN SPECIES	5	BMT2 (ENSCAFG00845030359)	GPR85 (ENSCAFG00845005755)	PPP1R3A (ENSCAFG00845005952)	FOXP2 (ENSCAFG00845006016)	MDFIC (ENSCAFG00845006114) #7	TFEC (ENSCAFG00845006297) #10	TES (ENSCAFG00845006418) #11	CAV2 (ENSCAFG00845006745) #12	CAV1 (ENSCAFG00845006847) #13	MET (ENSCAFG00845007244) #14	CAPZA2 (ENSCAFG00845007934) #15	ST7 (ENSCAFG00845008329) #16	WNT2 (ENSCAFG00845008849) #17	ASZ1 (ENSCAFG00845008921) #18	CFTR (ENSCAFG00845009171) #19	ENSCAFG00845010283 #22	ENSCAFG00845010332	ENSCAFG00845010446 #23	TSPAN12 (ENSCAFG00845010513) #24	ING3 (ENSCAFG00845010632) #25	CPED1 (ENSCAFG00845010739) #26	WNT16 (ENSCAFG00845010924) #27	FAM3C (ENSCAFG00845010960) #28	PTPRZ1 (ENSCAFG00845012086) #29	AASS (ENSCAFG00845014560) #30	CADPS2 (ENSCAFG00845014715)	SLC13A1 (ENSCAFG00845014948)	ENSCAFG00845015049
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326	ENSGT00390000008099	ENSGT00940000157073
Afrotheria	ANCESTRAL SPECIES	5	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326	ENSGT00390000008099	ENSGT00940000157073
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT01030000234550.a.a.d.a.a	ENSGT00390000014326	ENSGT00390000008099	ENSGT00940000157073
Elephant	MODERN SPECIES	428	PPP1R3A (ENSLAFG00000009257)	FOXP2 (ENSLAFG00000012661)	MDFIC (ENSLAFG00000013504) #7	ENSLAFG00000017267 #10	ENSLAFG00000031865 #10	TES (ENSLAFG00000017268) #11	CAV2 (ENSLAFG00000015065) #12	CAV1 (ENSLAFG00000028864) #13	MET (ENSLAFG00000011703) #14	CAPZA2 (ENSLAFG00000007766) #15	ST7 (ENSLAFG00000016129) #16	WNT2 (ENSLAFG00000022699) #17	ASZ1 (ENSLAFG00000005746) #18	CFTR (ENSLAFG00000005753) #19	CTTNBP2 (ENSLAFG00000005761) #20	LSM8 (ENSLAFG00000011242) #22	ENSLAFG00000011244	KCND2 (ENSLAFG00000008593) #23	TSPAN12 (ENSLAFG00000004689) #24	ING3 (ENSLAFG00000030488) #25	ENSLAFG00000032200 #26	ENSLAFG00000005279 #26	WNT16 (ENSLAFG00000010025) #27	FAM3C (ENSLAFG00000010029) #28	PTPRZ1 (ENSLAFG00000004565) #29	AASS (ENSLAFG00000004573) #30	FEZF1 (ENSLAFG00000013550)	CADPS2 (ENSLAFG00000013553)	SLC13A1 (ENSLAFG00000005670)	IQUB (ENSLAFG00000002619)	NDUFA5 (ENSLAFG00000030971)
Tenrec	MODERN SPECIES	2532																LSM8 (ENSETEG00000011594) #22	ENSETEG00000011595
Xenarthra	ANCESTRAL SPECIES	1822																ENSGT00730000111212 #22	ENSGT00940000161777.b
Armadillo	MODERN SPECIES	4550													CTTNBP2 (ENSDNOG00000001656) #20	ENSDNOG00000005117	ENSDNOG00000037877	LSM8 (ENSDNOG00000034613) #22	ENSDNOG00000040318
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000161777.a	ENSGT00940000153661.b	ENSGT00940000161777.b	ENSGT00940000155472.a.a #23	ENSGT00510000047764 #24	ENSGT00940000156619 #25	ENSGT00390000015216 #26	ENSGT00940000157480 #27	ENSGT00950000183004.a.b.a.a #28	ENSGT00940000155529.C #29	ENSGT00390000013249 #30	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000163928	ENSGT00940000163382
Opossum	MODERN SPECIES	7	ENSMODG00000046094	MDFIC (ENSMODG00000015856) #7	ENSMODG00000038037	ENSMODG00000045482	ENSMODG00000015845 #10	TES (ENSMODG00000015840) #11	CAV2 (ENSMODG00000047495) #12	CAV1 (ENSMODG00000015826) #13	MET (ENSMODG00000015822) #14	CAPZA2 (ENSMODG00000041408) #15	ST7 (ENSMODG00000015806) #16	WNT2 (ENSMODG00000015792) #17	ASZ1 (ENSMODG00000015784) #18	CFTR (ENSMODG00000015771) #19	CTTNBP2 (ENSMODG00000015754) #20	LSM8 (ENSMODG00000015729) #22	ENSMODG00000015735	ENSMODG00000027321	ENSMODG00000015525	ENSMODG00000024541	ENSMODG00000042953	ENSMODG00000015511	ENSMODG00000015504	ENSMODG00000044091	ENSMODG00000043163	KCND2 (ENSMODG00000024535) #23	TSPAN12 (ENSMODG00000015495) #24	ING3 (ENSMODG00000015490) #25	ENSMODG00000015486 #26	ENSMODG00000039477	ENSMODG00000038957 #26
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b.c #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000153661.b.f	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.e.b	ENSGT00940000161777.b
Diprotodontia	ANCESTRAL SPECIES	16	ENSGT00890000139436.B	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b.c #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000153661.b.f	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.e.b	ENSGT00940000161777.b
Diprotodontia_a	ANCESTRAL SPECIES	18	ENSGT00950000182989.D.a.b.i.b	ENSGT00940000157682.B	ENSGT00940000155480	ENSGT00940000158685 #7	ENSGT00940000159404 #10	ENSGT00940000155993 #11	ENSGT00950000183006.A.b #12	ENSGT00950000183006.B.f.b.a #13	ENSGT00940000158022 #14	ENSGT00950000183119.a.e.b #15	ENSGT00390000000873.a.b.c #16	ENSGT00940000159231 #17	ENSGT00880000138051.a #18	ENSGT00940000158567 #19	ENSGT00940000158293 #20	ENSGT00730000111212 #22	ENSGT00940000153661.b.f	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.e.b.c	ENSGT00940000161777.b
Common wonbat	MODERN SPECIES	1132	TES (ENSVURG00010020012) #11	CAV2 (ENSVURG00010020019) #12	CAV1 (ENSVURG00010020024) #13	MET (ENSVURG00010020038) #14	ENSVURG00010020055	ENSVURG00010020061	ENSVURG00010020064	CAPZA2 (ENSVURG00010020077) #15	ENSVURG00010020091	ST7 (ENSVURG00010020104) #16	WNT2 (ENSVURG00010020146) #17	ASZ1 (ENSVURG00010020160) #18	CFTR (ENSVURG00010020201) #19	CTTNBP2 (ENSVURG00010020262) #20	ENSVURG00010020288	LSM8 (ENSVURG00010020298) #22	ENSVURG00010020323
koala	MODERN SPECIES	281											ENSPCIG00000005245 #16	WNT2 (ENSPCIG00000005279) #17	ASZ1 (ENSPCIG00000005288) #18	CFTR (ENSPCIG00000005433) #19	CTTNBP2 (ENSPCIG00000006837) #20	LSM8 (ENSPCIG00000021467) #22	ENSPCIG00000021462	ENSPCIG00000021456	ENSPCIG00000033667	ENSPCIG00000021455	ENSPCIG00000021445	ENSPCIG00000036743	ENSPCIG00000021444
Wallaby	MODERN SPECIES	1709																LSM8 (ENSMEUG00000007801) #22
Tasmanian devil	MODERN SPECIES	4	PPP1R3A (ENSSHAG00000017954)	FOXP2 (ENSSHAG00000018566)	MDFIC (ENSSHAG00000018830) #7	ENSSHAG00000010737	TFEC (ENSSHAG00000012198) #10	TES (ENSSHAG00000013689) #11	ENSSHAG00000020716 #12	CAV1 (ENSSHAG00000030626) #13	MET (ENSSHAG00000015881) #14	CAPZA2 (ENSSHAG00000022040) #15	ST7 (ENSSHAG00000016896) #16	WNT2 (ENSSHAG00000017186) #17	ASZ1 (ENSSHAG00000017307) #18	CFTR (ENSSHAG00000030052) #19	CTTNBP2 (ENSSHAG00000017847) #20	LSM8 (ENSSHAG00000023318) #22	ENSSHAG00000018617	ENSSHAG00000026856	ENSSHAG00000018547	KCND2 (ENSSHAG00000007231) #23	TSPAN12 (ENSSHAG00000012139) #24	ING3 (ENSSHAG00000013063) #25	CPED1 (ENSSHAG00000013416) #26	WNT16 (ENSSHAG00000027699) #27	ENSSHAG00000015103 #28	PTPRZ1 (ENSSHAG00000016799) #29	AASS (ENSSHAG00000017254) #30	FEZF1 (ENSSHAG00000001391)	CADPS2 (ENSSHAG00000002469)	RNF133 (ENSSHAG00000008983)	RNF148 (ENSSHAG00000009015)