Mus_A	ANCESTRAL SPECIES	7	ENSGT00400000023684 #7	ENSGT00940000157682.B #8	ENSGT00940000155480 #9	ENSGT00940000158685 #10	ENSGT00940000159404 #11	ENSGT00940000155993.c #12	ENSGT00950000183006.A.b #13	ENSGT00950000183006.B.f.b.a #14	ENSGT00940000158022 #15	ENSGT00950000183119.a.e.b #16	ENSGT00390000000873.a.b #17	ENSGT00940000159231 #18	ENSGT00880000138051.a #19	ENSGT00940000158567 #20	ENSGT00940000158293 #21	ENSGT00730000111212 #22	ENSGT00940000161777.b #23	ENSGT00940000155472.a.a #24	ENSGT00510000047764 #25	ENSGT00940000156619 #26	ENSGT00390000015216 #27	ENSGT00940000157480 #28	ENSGT00950000183004.a.b.a.a #29	ENSGT00940000155529.C #30	ENSGT00390000013249 #31	ENSGT00940000159477 #32	ENSGT00590000083094.a.b #33	ENSGT00940000163928 #34	ENSGT00940000163382 #35	ENSGT01100000263477.B.d.b #36	ENSGT01030000234550.a.a.d.a.a #37
Mus_B	ANCESTRAL SPECIES	20	ENSGT00400000023684 #7	ENSGT00940000157682.B #8	ENSGT00940000155480 #9	ENSGT00940000158685 #10	ENSGT00940000159404 #11	ENSGT00940000155993.c #12	ENSGT00950000183006.A.b #13	ENSGT00950000183006.B.f.b.a #14	ENSGT00940000158022 #15	ENSGT00950000183119.a.e.b #16	ENSGT00390000000873.a.b #17	ENSGT00940000159231 #18	ENSGT00880000138051.a #19	ENSGT00940000158567 #20	ENSGT00940000158293 #21	ENSGT00730000111212 #22	ENSGT00940000161777.b #23	ENSGT00940000155472.a.a #24	ENSGT00510000047764 #25	ENSGT00940000156619 #26	ENSGT00390000015216 #27	ENSGT00940000157480 #28	ENSGT00950000183004.a.b.a.a #29	ENSGT00940000155529.C #30	ENSGT00390000013249 #31	ENSGT00940000159477 #32	ENSGT00590000083094.a.b #33	ENSGT00940000163928 #34	ENSGT00940000163382 #35	ENSGT01100000263477.B.d.b #36	ENSGT01030000234550.a.a.d.a.a #37
Mus_C	ANCESTRAL SPECIES	19	ENSGT00400000023684 #7	ENSGT00940000157682.B #8	ENSGT00940000155480 #9	ENSGT00940000158685 #10	ENSGT00940000159404 #11	ENSGT00940000155993.c #12	ENSGT00950000183006.A.b #13	ENSGT00950000183006.B.f.b.a #14	ENSGT00940000158022 #15	ENSGT00950000183119.a.e.b #16	ENSGT00390000000873.a.b #17	ENSGT00940000159231 #18	ENSGT00880000138051.a #19	ENSGT00940000158567 #20	ENSGT00940000158293 #21	ENSGT00730000111212 #22	ENSGT00940000161777.b #23	ENSGT00940000155472.a.a #24	ENSGT00510000047764 #25	ENSGT00940000156619 #26	ENSGT00390000015216 #27	ENSGT00940000157480 #28	ENSGT00950000183004.a.b.a.a #29	ENSGT00940000155529.C #30	ENSGT00390000013249 #31	ENSGT00940000159477 #32	ENSGT00590000083094.a.b #33	ENSGT00940000163928 #34	ENSGT00940000163382 #35	ENSGT01100000263477.B.d.b #36	ENSGT01030000234550.a.a.d.a.a #37
spretus	MODERN SPECIES	15	Smim30 (MGP_SPRETEiJ_G0029110) #7	Ppp1r3a (MGP_SPRETEiJ_G0029111) #8	Foxp2 (MGP_SPRETEiJ_G0029112) #9	MGP_SPRETEiJ_G0029113 #10	Tfec (MGP_SPRETEiJ_G0029114) #11	Tes (MGP_SPRETEiJ_G0029115) #12	Cav2 (MGP_SPRETEiJ_G0029116) #13	Cav1 (MGP_SPRETEiJ_G0029117) #14	Met (MGP_SPRETEiJ_G0029118) #15	Capza2 (MGP_SPRETEiJ_G0029119) #16	St7 (MGP_SPRETEiJ_G0029120) #17	Wnt2 (MGP_SPRETEiJ_G0029121) #18	Asz1 (MGP_SPRETEiJ_G0029122) #19	Cftr (MGP_SPRETEiJ_G0029123) #20	Cttnbp2 (MGP_SPRETEiJ_G0029124) #21	Lsm8 (MGP_SPRETEiJ_G0029125) #22	Ankrd7 (MGP_SPRETEiJ_G0029126) #23	Kcnd2 (MGP_SPRETEiJ_G0029127) #24	Tspan12 (MGP_SPRETEiJ_G0029128) #25	Ing3 (MGP_SPRETEiJ_G0029129) #26	Cped1 (MGP_SPRETEiJ_G0029130) #27	Wnt16 (MGP_SPRETEiJ_G0029131) #28	Fam3c (MGP_SPRETEiJ_G0029132) #29	Ptprz1 (MGP_SPRETEiJ_G0029133) #30	Aass (MGP_SPRETEiJ_G0029134) #31	Fezf1 (MGP_SPRETEiJ_G0029135) #32	Cadps2 (MGP_SPRETEiJ_G0029136) #33	Rnf133 (MGP_SPRETEiJ_G0029137) #34	Rnf148 (MGP_SPRETEiJ_G0029138) #35	Tas2r118 (MGP_SPRETEiJ_G0029139) #36	Slc13a1 (MGP_SPRETEiJ_G0029140) #37
Steppe mouse	MODERN SPECIES	3300														Cttnbp2 (ENSMSIG00000019587) #21	ENSMSIG00000019569	ENSMSIG00000019550 #22	Ankrd7 (ENSMSIG00000019528) #23	ENSMSIG00000019517	ENSMSIG00000019508	ENSMSIG00000019486	ENSMSIG00000019470	Kcnd2 (ENSMSIG00000019456) #24	Tspan12 (ENSMSIG00000019433) #25	Ing3 (ENSMSIG00000019386) #26	Cped1 (ENSMSIG00000019364) #27	Wnt16 (ENSMSIG00000019307) #28	Fam3c (ENSMSIG00000019205) #29	ENSMSIG00000019192	Ptprz1 (ENSMSIG00000018983) #30
Mouse	MODERN SPECIES	15	Smim30 (ENSMUSG00000052419) #7	Ppp1r3a (ENSMUSG00000042717) #8	Foxp2 (ENSMUSG00000029563) #9	Mdfic (ENSMUSG00000041390) #10	Tfec (ENSMUSG00000029553) #11	Tes (ENSMUSG00000029552) #12	Cav2 (ENSMUSG00000000058) #13	Cav1 (ENSMUSG00000007655) #14	Met (ENSMUSG00000009376) #15	Capza2 (ENSMUSG00000015733) #16	St7 (ENSMUSG00000029534) #17	Wnt2 (ENSMUSG00000010797) #18	Asz1 (ENSMUSG00000010796) #19	Cftr (ENSMUSG00000041301) #20	Cttnbp2 (ENSMUSG00000000416) #21	Lsm8 (ENSMUSG00000044155) #22	Ankrd7 (ENSMUSG00000029517) #23	Kcnd2 (ENSMUSG00000060882) #24	Tspan12 (ENSMUSG00000029669) #25	Ing3 (ENSMUSG00000029670) #26	Cped1 (ENSMUSG00000062980) #27	Wnt16 (ENSMUSG00000029671) #28	Fam3c (ENSMUSG00000029672) #29	Ptprz1 (ENSMUSG00000068748) #30	Aass (ENSMUSG00000029695) #31	Fezf1 (ENSMUSG00000029697) #32	Cadps2 (ENSMUSG00000017978) #33	Rnf133 (ENSMUSG00000051956) #34	Rnf148 (ENSMUSG00000078179) #35	Tas2r118 (ENSMUSG00000043865) #36	Slc13a1 (ENSMUSG00000029700) #37
Ryukyu mouse	MODERN SPECIES	15	Smim30 (MGP_CAROLIEiJ_G0028110) #7	Ppp1r3a (MGP_CAROLIEiJ_G0028111) #8	Foxp2 (MGP_CAROLIEiJ_G0028112) #9	MGP_CAROLIEiJ_G0028113 #10	Tfec (MGP_CAROLIEiJ_G0028114) #11	Tes (MGP_CAROLIEiJ_G0028115) #12	Cav2 (MGP_CAROLIEiJ_G0028116) #13	Cav1 (MGP_CAROLIEiJ_G0028117) #14	Met (MGP_CAROLIEiJ_G0028118) #15	Capza2 (MGP_CAROLIEiJ_G0028119) #16	St7 (MGP_CAROLIEiJ_G0028120) #17	Wnt2 (MGP_CAROLIEiJ_G0028121) #18	Asz1 (MGP_CAROLIEiJ_G0028122) #19	Cftr (MGP_CAROLIEiJ_G0028123) #20	Cttnbp2 (MGP_CAROLIEiJ_G0028124) #21	Lsm8 (MGP_CAROLIEiJ_G0028125) #22	Ankrd7 (MGP_CAROLIEiJ_G0028126) #23	Kcnd2 (MGP_CAROLIEiJ_G0028127) #24	Tspan12 (MGP_CAROLIEiJ_G0028128) #25	Ing3 (MGP_CAROLIEiJ_G0028129) #26	Cped1 (MGP_CAROLIEiJ_G0028130) #27	Wnt16 (MGP_CAROLIEiJ_G0028131) #28	Fam3c (MGP_CAROLIEiJ_G0028132) #29	Ptprz1 (MGP_CAROLIEiJ_G0028133) #30	Aass (MGP_CAROLIEiJ_G0028134) #31	Fezf1 (MGP_CAROLIEiJ_G0028135) #32	Cadps2 (MGP_CAROLIEiJ_G0028136) #33	Rnf133 (MGP_CAROLIEiJ_G0028137) #34	Rnf148 (MGP_CAROLIEiJ_G0028138) #35	Tas2r118 (MGP_CAROLIEiJ_G0028139) #36	Slc13a1 (MGP_CAROLIEiJ_G0028140) #37