Laurasiatheria ANCESTRAL SPECIES 21 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT01100000263477.B.d.b #36 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT01100000263477.B.d.b #36 Artiodactyla ANCESTRAL SPECIES 11 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT01100000263477.B.d.b #36 Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT01100000263477.B.d.b #36 Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT01100000263477.B.d.b #36 ENSGT01030000234550.a.a.d.a.a #37 Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES ENSGT00730000111212.i.b #22 Percora_a ANCESTRAL SPECIES ENSGT00730000111212.i.b #22 Bovidae ANCESTRAL SPECIES ENSGT00730000111212.i.b #22 Caprinae ANCESTRAL SPECIES 10 ENSGT00940000157866 #7 ENSGT00390000002582 #8 ENSGT00940000157852 #9 ENSGT00940000155142 #10 ENSGT00390000011176 #11 ENSGT00940000156175 #12 ENSGT00390000000481 #13 ENSGT00950000182882.A.b.a #14 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #23 ENSGT00940000153143.a.a.f.e.a.b #16 ENSGT00940000153143.a.a.f.e.a.a.a #17 ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b #18 ENSGT00940000153143.a.a.f.e.b.b #19 ENSGT00950000185265 #20 ENSGT00940000153143.a.b.b.a.b.d.a #21 ENSGT00730000111212.i.b #22 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163382 #35 ENSGT01100000263477.B.d.b #36 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00390000014326 ENSGT00390000008099 Rambouillet Sheep MODERN SPECIES 20 SUGCT (ENSOARG00020000282) #7 MPLKIP (ENSOARG00020000391) #8 CDK13 (ENSOARG00020000425) #9 RALA (ENSOARG00020000572) #10 ENSOARG00020000581 #11 POU6F2 (ENSOARG00020000606) #12 VPS41 (ENSOARG00020000815) #13 AMPH (ENSOARG00020001336) #14 ENSOARG00020001937 #15 ENSOARG00020001954 #16 ENSOARG00020001968 #17 ENSOARG00020001983 #18 ENSOARG00020002001 #19 ENSOARG00020002006 #20 ENSOARG00020002009 #21 LSM8 (ENSOARG00020002018) #22 ENSOARG00020002076 #23 ENSOARG00020002086 #24 KCND2 (ENSOARG00020002102) #25 TSPAN12 (ENSOARG00020002120) #26 ING3 (ENSOARG00020002148) #27 CPED1 (ENSOARG00020002197) #28 WNT16 (ENSOARG00020002230) #29 FAM3C (ENSOARG00020002246) #30 PTPRZ1 (ENSOARG00020002274) #31 AASS (ENSOARG00020002396) #32 FEZF1 (ENSOARG00020002443) #33 CADPS2 (ENSOARG00020002550) #34 ENSOARG00020003299 #35 TAS2R16 (ENSOARG00020003346) #36 SLC13A1 (ENSOARG00020003399) #37 Goat MODERN SPECIES 23 INHBA (ENSCHIG00000025901) SUGCT (ENSCHIG00000017599) #7 MPLKIP (ENSCHIG00000021871) #8 ENSCHIG00000022322 CDK13 (ENSCHIG00000022113) #9 RALA (ENSCHIG00000013549) #10 YAE1 (ENSCHIG00000016002) #11 ENSCHIG00000016882 #12 ENSCHIG00000020600 #12 VPS41 (ENSCHIG00000005959) #13 ENSCHIG00000011903 #15 AMPH (ENSCHIG00000020495) #14 ENSCHIG00000013794 #23 ENSCHIG00000018076 #18 ENSCHIG00000007301 #21 LSM8 (ENSCHIG00000014201) #22 ENSCHIG00000022010 KCND2 (ENSCHIG00000017913) #25 ENSCHIG00000025503 TSPAN12 (ENSCHIG00000012755) #26 ING3 (ENSCHIG00000009707) #27 CPED1 (ENSCHIG00000007761) #28 WNT16 (ENSCHIG00000016384) #29 FAM3C (ENSCHIG00000026717) #30 PTPRZ1 (ENSCHIG00000017298) #31 AASS (ENSCHIG00000009703) #32 FEZF1 (ENSCHIG00000012204) #33 CADPS2 (ENSCHIG00000022820) #34 SLC13A1 (ENSCHIG00000014530) #37 IQUB (ENSCHIG00000021401) NDUFA5 (ENSCHIG00000014906) Siberian musk deer MODERN SPECIES 86 AMPH (ENSMMSG00000008661) #14 ENSMMSG00000008617 ##23 ENSMMSG00000008601 ##23 ENSMMSG00000008592 ##23 ENSMMSG00000008575 #16 ENSMMSG00000008519 #18 ENSMMSG00000008499 #19 ENSMMSG00000008472 ##23 ENSMMSG00000008438 #22 ENSMMSG00000008402 ENSMMSG00000008377 Yarkand deer MODERN SPECIES 9 ENSCHYG00000022441 MPLKIP (ENSCHYG00000022483) #8 CDK13 (ENSCHYG00000022509) #9 RALA (ENSCHYG00000022661) #10 YAE1 (ENSCHYG00000022705) #11 POU6F2 (ENSCHYG00000022756) #12 VPS41 (ENSCHYG00000023031) #13 AMPH (ENSCHYG00000023423) #14 ENSCHYG00000023515 TRGV9 (ENSCHYG00000023546) ##23 ENSCHYG00000023578 #23 ENSCHYG00000023641 #18 ENSCHYG00000023676 #17 ENSCHYG00000023709 #21 ENSCHYG00000023745 ##23 ENSCHYG00000023772 #22 ENSCHYG00000023821 KCND2 (ENSCHYG00000023858) #25 TSPAN12 (ENSCHYG00000023924) #26 ING3 (ENSCHYG00000023988) #27 CPED1 (ENSCHYG00000024149) #28 WNT16 (ENSCHYG00000024300) #29 FAM3C (ENSCHYG00000024340) #30 ENSCHYG00000024383 AASS (ENSCHYG00000026446) #32 FEZF1 (ENSCHYG00000026487) #33 CADPS2 (ENSCHYG00000026611) #34 ENSCHYG00000026909 TAS2R16 (ENSCHYG00000026914) #36 SLC13A1 (ENSCHYG00000026920) #37 IQUB (ENSCHYG00000026931) Pecora ANCESTRAL SPECIES 96 ENSGT00730000111212.i.a ##22 ENSGT00940000161777.b Yarkand deer MODERN SPECIES 1323 RRAGB (ENSCHYG00000020728) FOXR2 (ENSCHYG00000020686) ENSCHYG00000020662 ENSCHYG00000020557 GPR173 (ENSCHYG00000020549) TSPYL2 (ENSCHYG00000020486) KANTR (ENSCHYG00000020454) ENSCHYG00000020423 KDM5C (ENSCHYG00000017975) IQSEC2 (ENSCHYG00000017227) SMC1A (ENSCHYG00000016933) RIBC1 (ENSCHYG00000016704) HSD17B10 (ENSCHYG00000016557) ENSCHYG00000016502 HUWE1 (ENSCHYG00000016142) ENSCHYG00000016027 ##22 ENSCHYG00000015970 PHF8 (ENSCHYG00000015566) ENSCHYG00000015498 ENSCHYG00000015432 FAM120C (ENSCHYG00000015064) WNK3 (ENSCHYG00000014818) ENSCHYG00000014706 FGD1 (ENSCHYG00000014503) GNL3L (ENSCHYG00000014302) MAGED2 (ENSCHYG00000014061) ENSCHYG00000014013 PFKFB1 (ENSCHYG00000013428) APEX2 (ENSCHYG00000013314) ALAS2 (ENSCHYG00000013150) ENSCHYG00000013116 Percora_a ANCESTRAL SPECIES 101 ENSGT00730000111212.i.a ##22 ENSGT00940000161777.b Bovidae ANCESTRAL SPECIES 102 ENSGT00730000111212.i.a ##22 ENSGT00940000161777.b Bovinae ANCESTRAL SPECIES 60 ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #23 ENSGT00940000153143.a.a.f.e.a.b #16 ENSGT00940000153143.a.a.f.e.a.a.a #17 ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b #18 ENSGT00940000153143.a.a.f.e.b.b #19 ENSGT00950000185265 #20 ENSGT00940000153143.a.b.b.a.b.d.a #21 ENSGT00730000111212.i.a ##22 ENSGT00940000161777.b Bos ANCESTRAL SPECIES 8 ENSGT00940000156175 #12 ENSGT00390000000481 #13 ENSGT00950000182882.A.b.a #14 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ##23 ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #23 ENSGT00940000153143.a.a.f.e.a.b #16 ENSGT00940000153143.a.a.f.e.a.a.a #17 ENSGT00940000153143.a.a.f.e.a.a.b.b ##23 ENSGT00940000153143.a.a.f.e.a.a.b.a ##23 ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b #18 ENSGT00940000153143.a.a.f.e.b.b #19 ENSGT00950000185265.d #20 ENSGT00950000185265.c #20 ENSGT00940000153143.a.b.b.a.b.d.a #21 ENSGT00730000111212.i.a ##22 ENSGT00940000161777.b ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000153305.d.`b.b ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01100000263477.B.d.b #36 ENSGT01030000234550.a.a.d.a.a #37 Bos_a ANCESTRAL SPECIES 12 ENSGT00940000155142 #10 ENSGT00390000011176 #11 ENSGT00940000156175 #12 ENSGT00390000000481 #13 ENSGT00950000182882.A.b.a #14 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ##23 ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #23 ENSGT00940000153143.a.a.f.e.a.b #16 ENSGT00940000153143.a.a.f.e.a.a.a #17 ENSGT00940000153143.a.a.f.e.a.a.b.b ##23 ENSGT00940000153143.a.a.f.e.a.a.b.a ##23 ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b #18 ENSGT00950000185265.c #20 ENSGT00940000153143.a.b.b.a.b.d.a #21 ENSGT00730000111212.i.a ##22 ENSGT00940000161777.b ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01100000263477.B.d.b #36 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00990000210481 Wild yak MODERN SPECIES 362 ENSBMUG00000011929 #20 ENSBMUG00000011918 #21 LSM8 (ENSBMUG00000011907) ##22 ENSBMUG00000011893 Bos_b ANCESTRAL SPECIES 7 ENSGT00940000157866 #7 ENSGT00390000002582 #8 ENSGT00940000157852 #9 ENSGT00940000159695.h ENSGT00940000155142 #10 ENSGT00390000011176 #11 ENSGT00940000156175 #12 ENSGT00390000000481 #13 ENSGT00950000182882.A.b.a #14 ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b #23 ENSGT00940000153143.a.a.f.e.a.b #16 ENSGT00940000153143.a.a.f.e.a.a.a #17 ENSGT00940000153143.a.a.f.e.a.a.b.b ##23 ENSGT00940000153143.a.a.f.e.a.a.b.a ##23 ENSGT00940000153143.a.b.b.a.b.d.a #21 ENSGT00730000111212.i.a ##22 ENSGT00550000074794.k.b.a ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000153305.d.`b.b ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01100000263477.B.d.b #36 ENSGT01030000234550.a.a.d.a.a #37 Cow MODERN SPECIES 23 ENSBTAG00000053253 SUGCT (ENSBTAG00000032121) #7 MPLKIP (ENSBTAG00000018715) #8 CDK13 (ENSBTAG00000001528) #9 ENSBTAG00000054825 RALA (ENSBTAG00000006661) #10 YAE1 (ENSBTAG00000001892) #11 POU6F2 (ENSBTAG00000013648) #12 VPS41 (ENSBTAG00000007305) #13 AMPH (ENSBTAG00000031967) #14 ENSBTAG00000000144 #23 ENSBTAG00000053474 #17 ENSBTAG00000055254 #18 ENSBTAG00000002859 #19 ENSBTAG00000049399 #21 LSM8 (ENSBTAG00000012649) ##22 ENSBTAG00000006152 ENSBTAG00000031464 KCND2 (ENSBTAG00000032077) #25 TSPAN12 (ENSBTAG00000015337) #26 ING3 (ENSBTAG00000016332) #27 CPED1 (ENSBTAG00000002938) #28 WNT16 (ENSBTAG00000002940) #29 FAM3C (ENSBTAG00000007976) #30 PTPRZ1 (ENSBTAG00000012119) #31 AASS (ENSBTAG00000012128) #32 FEZF1 (ENSBTAG00000005103) #33 CADPS2 (ENSBTAG00000005110) #34 TAS2R16 (ENSBTAG00000032049) #36 SLC13A1 (ENSBTAG00000006674) #37 IQUB (ENSBTAG00000004405) Hybrid Bos Indicus MODERN SPECIES 23 ENSBIXG00005020596 #23 ENSBIXG00005020605 #16 ENSBIXG00005020637 #17 ENSBIXG00005003487 ##23 ENSBIXG00005020654 ##23 ENSBIXG00005020661 ENSBIXG00005020677 #20 ENSBIXG00005020685 #19 ENSBIXG00005020688 ENSBIXG00005020710 #20 ENSBIXG00005020722 #19 ENSBIXG00005020732 ENSBIXG00005020739 ENSBIXG00005003508 #20 ENSBIXG00005020753 #23 LSM8 (ENSBIXG00005007213) ##22 ENSBIXG00005020819 ENSBIXG00005020842 ENSBIXG00005020857 KCND2 (ENSBIXG00005020893) #25 TSPAN12 (ENSBIXG00005020981) #26 ENSBIXG00005021009 ING3 (ENSBIXG00005021098) #27 CPED1 (ENSBIXG00005021186) #28 WNT16 (ENSBIXG00005021232) #29 FAM3C (ENSBIXG00005021252) #30 PTPRZ1 (ENSBIXG00005021416) #31 AASS (ENSBIXG00005021503) #32 ENSBIXG00005003630 FEZF1 (ENSBIXG00005000004) #33 CADPS2 (ENSBIXG00005007840) #34 American bison MODERN SPECIES 3079 ENSBBBG00000022660 #20 ENSBBBG00000022653 #21 LSM8 (ENSBBBG00000022649) ##22 ENSBBBG00000022640 ENSBBBG00000022631 ENSBBBG00000022622 Siberian musk deer MODERN SPECIES 257 ENSMMSG00000019123 FOXB1 (ENSMMSG00000019181) ENSMMSG00000019194 ENSMMSG00000019221 BNIP2 (ENSMMSG00000019237) GTF2A2 (ENSMMSG00000019278) GCNT3 (ENSMMSG00000019356) FAM81A (ENSMMSG00000019367) MYO1E (ENSMMSG00000019415) ENSMMSG00000019472 ENSMMSG00000019489 RNF111 (ENSMMSG00000019565) ENSMMSG00000019602 SLTM (ENSMMSG00000019627) MINDY2 (ENSMMSG00000019661) ENSMMSG00000019695 ##22 ADAM10 (ENSMMSG00000019713) LIPC (ENSMMSG00000019830) AQP9 (ENSMMSG00000019948) ALDH1A2 (ENSMMSG00000019982) POLR2M (ENSMMSG00000020150) MYZAP (ENSMMSG00000020205) CGNL1 (ENSMMSG00000020305) TCF12 (ENSMMSG00000020389) ZNF280D (ENSMMSG00000020750) MNS1 (ENSMMSG00000020858) TEX9 (ENSMMSG00000005857) ENSMMSG00000006005 RFX7 (ENSMMSG00000006029) NEDD4 (ENSMMSG00000006090) PRTG (ENSMMSG00000006260) Pecora ANCESTRAL SPECIES ENSGT00730000111212.j ##22 Percora_a ANCESTRAL SPECIES ENSGT00730000111212.j ##22 Bovidae ANCESTRAL SPECIES ENSGT00730000111212.j ##22 Bovinae ANCESTRAL SPECIES ENSGT00730000111212.j ##22 Bos ANCESTRAL SPECIES ENSGT00730000111212.j ##22 Bos_a ANCESTRAL SPECIES ENSGT00730000111212.j ##22 Domestic yak MODERN SPECIES 23 RALA (ENSBGRG00000009084) #10 YAE1 (ENSBGRG00000009045) #11 POU6F2 (ENSBGRG00000008844) #12 VPS41 (ENSBGRG00000008270) #13 AMPH (ENSBGRG00000007825) #14 ENSBGRG00000007791 ##23 ENSBGRG00000007724 #23 ENSBGRG00000007684 #16 ENSBGRG00000007662 #16 ENSBGRG00000007638 #17 ENSBGRG00000007614 ##23 ENSBGRG00000007552 ##23 ENSBGRG00000007497 #18 ENSBGRG00000007474 #20 ENSBGRG00000007452 #21 ENSBGRG00000007313 ##22 ENSBGRG00000026231 ENSBGRG00000026227 ENSBGRG00000026222 ENSBGRG00000026214 KCND2 (ENSBGRG00000026206) #25 TSPAN12 (ENSBGRG00000026203) #26 ENSBGRG00000026200 ING3 (ENSBGRG00000026186) #27 ENSBGRG00000026183 CPED1 (ENSBGRG00000026179) #28 WNT16 (ENSBGRG00000026173) #29 FAM3C (ENSBGRG00000026163) #30 PTPRZ1 (ENSBGRG00000025791) #31 AASS (ENSBGRG00000025745) #32 FEZF1 (ENSBGRG00000025722) #33 Yarkand deer MODERN SPECIES 60 ENSCHYG00000019205 ENSCHYG00000019255 ENSCHYG00000019665 ##22 ENSCHYG00000019725 ENSCHYG00000019762 ENSCHYG00000019880 Cetacea ANCESTRAL SPECIES 13 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a.c.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00990000210481 ENSGT00390000014326 ENSGT00390000008099.hb.b Odontoceti ANCESTRAL SPECIES 12 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00940000155472.a.a #25 ENSGT00390000018696.ab.b ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a.c.a #30 ENSGT01010000229619 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00990000210481 Sperm whale MODERN SPECIES 16 FOXP2 (ENSPCTG00005000718) MDFIC (ENSPCTG00005000577) ENSPCTG00005000563 TFEC (ENSPCTG00005000435) TES (ENSPCTG00005000357) CAV2 (ENSPCTG00005000335) ENSPCTG00005000318 CAV1 (ENSPCTG00005000307) MET (ENSPCTG00005000258) CAPZA2 (ENSPCTG00005003893) ST7 (ENSPCTG00005003837) WNT2 (ENSPCTG00005003803) ASZ1 (ENSPCTG00005003795) CFTR (ENSPCTG00005003550) CTTNBP2 (ENSPCTG00005003446) LSM8 (ENSPCTG00005003422) #22 ENSPCTG00005003384 ENSPCTG00005003369 #25 ENSPCTG00005003353 TSPAN12 (ENSPCTG00005003339) #26 ING3 (ENSPCTG00005003320) #27 CPED1 (ENSPCTG00005003296) #28 WNT16 (ENSPCTG00005003279) #29 FAM3C (ENSPCTG00005003260) #30 ENSPCTG00005003246 PTPRZ1 (ENSPCTG00005003179) #31 AASS (ENSPCTG00005003140) #32 FEZF1 (ENSPCTG00005003111) #33 CADPS2 (ENSPCTG00005002800) #34 SLC13A1 (ENSPCTG00005002663) #37 ENSPCTG00005002648 Odontoceti_a ANCESTRAL SPECIES 13 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00940000155472.a.a #25 ENSGT00390000018696.ab.b ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a.c.a #30 ENSGT01010000229619 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00990000210481 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00940000155472.a.a #25 ENSGT00390000018696.ab.b ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a.c.a #30 ENSGT01010000229619 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000162417.B ENSGT01030000234550.a.a.d.a.a #37 Monodontidae ANCESTRAL SPECIES 12 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00940000155472.a.a #25 ENSGT00390000018696.ab.b ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a.c.a #30 ENSGT00390000002517.a.b.b.c.b.b ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000162417.B ENSGT01030000234550.a.a.d.a.a #37 Narwhal MODERN SPECIES 306 FOXP2 (ENSMMNG00015006660) MDFIC (ENSMMNG00015006992) ENSMMNG00015007012 TFEC (ENSMMNG00015007059) TES (ENSMMNG00015007124) CAV2 (ENSMMNG00015007157) CAV1 (ENSMMNG00015007169) MET (ENSMMNG00015007208) CAPZA2 (ENSMMNG00015007277) ST7 (ENSMMNG00015007638) ENSMMNG00015008101 WNT2 (ENSMMNG00015008114) ASZ1 (ENSMMNG00015008132) CFTR (ENSMMNG00015008191) CTTNBP2 (ENSMMNG00015008242) LSM8 (ENSMMNG00015008300) #22 ENSMMNG00015008326 KCND2 (ENSMMNG00015008351) #25 ENSMMNG00015008364 TSPAN12 (ENSMMNG00015008372) #26 ING3 (ENSMMNG00015008385) #27 CPED1 (ENSMMNG00015008430) #28 WNT16 (ENSMMNG00015008481) #29 ENSMMNG00015008492 #30 ENSMMNG00015008511 PTPRZ1 (ENSMMNG00015008685) #31 AASS (ENSMMNG00015008962) #32 ENSMMNG00015008989 FEZF1 (ENSMMNG00015009003) #33 CADPS2 (ENSMMNG00015009046) #34 ENSMMNG00015009100 Beluga whale MODERN SPECIES 72 FOXP2 (ENSDLEG00000010860) MDFIC (ENSDLEG00000010705) ENSDLEG00000010692 TFEC (ENSDLEG00000010641) TES (ENSDLEG00000010623) CAV2 (ENSDLEG00000010616) CAV1 (ENSDLEG00000010596) MET (ENSDLEG00000010515) CAPZA2 (ENSDLEG00000010489) ST7 (ENSDLEG00000010402) WNT2 (ENSDLEG00000010382) ENSDLEG00000010374 ASZ1 (ENSDLEG00000010228) CFTR (ENSDLEG00000009386) CTTNBP2 (ENSDLEG00000009204) LSM8 (ENSDLEG00000009162) #22 ENSDLEG00000009082 ENSDLEG00000009057 #25 ENSDLEG00000009040 TSPAN12 (ENSDLEG00000009002) #26 ING3 (ENSDLEG00000008957) #27 CPED1 (ENSDLEG00000008806) #28 WNT16 (ENSDLEG00000008763) #29 ENSDLEG00000008725 #30 ENSDLEG00000008697 PTPRZ1 (ENSDLEG00000008502) #31 ENSDLEG00000008472 AASS (ENSDLEG00000008185) #32 FEZF1 (ENSDLEG00000008135) #33 CADPS2 (ENSDLEG00000007974) #34 SLC13A1 (ENSDLEG00000013207) #37 Vaquita MODERN SPECIES 20 FOXP2 (ENSPSNG00000008393) MDFIC (ENSPSNG00000008245) ENSPSNG00000008210 TFEC (ENSPSNG00000008020) TES (ENSPSNG00000007868) CAV2 (ENSPSNG00000007812) CAV1 (ENSPSNG00000007757) MET (ENSPSNG00000007686) CAPZA2 (ENSPSNG00000007567) ST7 (ENSPSNG00000007232) WNT2 (ENSPSNG00000007074) ASZ1 (ENSPSNG00000006996) CFTR (ENSPSNG00000006540) ENSPSNG00000006366 CTTNBP2 (ENSPSNG00000006336) LSM8 (ENSPSNG00000006282) #22 ENSPSNG00000006207 ENSPSNG00000006167 KCND2 (ENSPSNG00000006128) #25 TSPAN12 (ENSPSNG00000006100) #26 ING3 (ENSPSNG00000006054) #27 CPED1 (ENSPSNG00000006017) #28 WNT16 (ENSPSNG00000005981) #29 FAM3C (ENSPSNG00000005949) #30 ENSPSNG00000005910 PTPRZ1 (ENSPSNG00000005040) #31 AASS (ENSPSNG00000004701) #32 FEZF1 (ENSPSNG00000004653) #33 CADPS2 (ENSPSNG00000004337) #34 ENSPSNG00000004162 ENSPSNG00000020858 Dolphin MODERN SPECIES 3850 LSM8 (ENSTTRG00000001023) #22 Blue whale MODERN SPECIES 20 FOXP2 (ENSBMSG00010007623) MDFIC (ENSBMSG00010007534) ENSBMSG00010007525 TFEC (ENSBMSG00010007456) ENSBMSG00010007423 TES (ENSBMSG00010007413) CAV2 (ENSBMSG00010007399) CAV1 (ENSBMSG00010007383) MET (ENSBMSG00010007360) CAPZA2 (ENSBMSG00010007309) ST7 (ENSBMSG00010007217) WNT2 (ENSBMSG00010007149) ASZ1 (ENSBMSG00010007122) CFTR (ENSBMSG00010007097) CTTNBP2 (ENSBMSG00010007046) LSM8 (ENSBMSG00010007016) #22 ENSBMSG00010006964 ENSBMSG00010006935 KCND2 (ENSBMSG00010006920) #25 TSPAN12 (ENSBMSG00010006907) #26 ING3 (ENSBMSG00010006892) #27 CPED1 (ENSBMSG00010006795) #28 WNT16 (ENSBMSG00010006732) #29 ENSBMSG00010006715 #30 PTPRZ1 (ENSBMSG00010006646) #31 AASS (ENSBMSG00010006576) #32 CADPS2 (ENSBMSG00010006309) #34 ENSBMSG00010006242 TAS2R16 (ENSBMSG00010006234) #36 SLC13A1 (ENSBMSG00010006206) #37 ENSBMSG00010006184 Camelidae ANCESTRAL SPECIES 2 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163928 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00990000210481 Alpaca MODERN SPECIES 4499 LSM8 (ENSVPAG00000001530) #22 Arabian camel MODERN SPECIES 33 PPP1R3A (ENSCDRG00005001622) FOXP2 (ENSCDRG00005001657) MDFIC (ENSCDRG00005001780) TFEC (ENSCDRG00005001818) TES (ENSCDRG00005001915) ENSCDRG00005001925 CAV2 (ENSCDRG00005001940) CAV1 (ENSCDRG00005001956) MET (ENSCDRG00005001975) CAPZA2 (ENSCDRG00005002005) ST7 (ENSCDRG00005002055) WNT2 (ENSCDRG00005002127) ASZ1 (ENSCDRG00005002142) CFTR (ENSCDRG00005002205) CTTNBP2 (ENSCDRG00005002863) LSM8 (ENSCDRG00005003356) #22 ENSCDRG00005003389 ENSCDRG00005003449 KCND2 (ENSCDRG00005003477) #25 TSPAN12 (ENSCDRG00005003541) #26 ING3 (ENSCDRG00005003592) #27 CPED1 (ENSCDRG00005003698) #28 WNT16 (ENSCDRG00005003896) #29 FAM3C (ENSCDRG00005003932) #30 PTPRZ1 (ENSCDRG00005004019) #31 AASS (ENSCDRG00005004255) #32 FEZF1 (ENSCDRG00005004315) #33 CADPS2 (ENSCDRG00005004422) #34 SLC13A1 (ENSCDRG00005004922) #37 ENSCDRG00005004974 IQUB (ENSCDRG00005004987) Suina ANCESTRAL SPECIES 19 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01100000263477.B.d.b #36 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00390000014326 Chacoan peccary MODERN SPECIES 72 LSM8 (ENSCWAG00000000714) #22 ENSCWAG00000000745 KCND2 (ENSCWAG00000000757) #25 TSPAN12 (ENSCWAG00000000779) #26 ING3 (ENSCWAG00000000811) #27 CPED1 (ENSCWAG00000000900) #28 WNT16 (ENSCWAG00000001054) #29 FAM3C (ENSCWAG00000001074) #30 ENSCWAG00000001100 PTPRZ1 (ENSCWAG00000001255) #31 AASS (ENSCWAG00000002749) #32 ENSCWAG00000002779 FEZF1 (ENSCWAG00000002791) #33 CADPS2 (ENSCWAG00000002856) #34 TAS2R16 (ENSCWAG00000003208) #36 SLC13A1 (ENSCWAG00000003215) #37 Pig MODERN SPECIES 9 PPP1R3A (ENSSSCG00000016640) FOXP2 (ENSSSCG00000016639) MDFIC (ENSSSCG00000021885) TFEC (ENSSSCG00000038138) TES (ENSSSCG00000040344) CAV2 (ENSSSCG00000016635) CAV1 (ENSSSCG00000016634) MET (ENSSSCG00000024351) CAPZA2 (ENSSSCG00000028113) ST7 (ENSSSCG00000016629) WNT2 (ENSSSCG00000016628) ASZ1 (ENSSSCG00000016627) CFTR (ENSSSCG00000016626) CTTNBP2 (ENSSSCG00000016625) ENSSSCG00000050786 LSM8 (ENSSSCG00000021652) #22 ENSSSCG00000016623 ENSSSCG00000048258 ENSSSCG00000063110 ENSSSCG00000062673 KCND2 (ENSSSCG00000016621) #25 TSPAN12 (ENSSSCG00000016620) #26 ING3 (ENSSSCG00000016619) #27 CPED1 (ENSSSCG00000016618) #28 WNT16 (ENSSSCG00000016617) #29 FAM3C (ENSSSCG00000016616) #30 PTPRZ1 (ENSSSCG00000016614) #31 AASS (ENSSSCG00000016613) #32 FEZF1 (ENSSSCG00000031221) #33 CADPS2 (ENSSSCG00000016611) #34 TAS2R16 (ENSSSCG00000037368) #36 Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT01100000263477.B.d.b #36 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT00590000083094.a.b #34 ENSGT01100000263477.B.d.b #36 Chiroptera ANCESTRAL SPECIES 41 ENSGT00890000139436.B ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT00590000083094.a.b #34 ENSGT01100000263477.B.d.b #36 Megabat MODERN SPECIES 3650 CFTR (ENSPVAG00000000987) CTTNBP2 (ENSPVAG00000000989) LSM8 (ENSPVAG00000000990) #22 ENSPVAG00000000992 Microchiroptera ANCESTRAL SPECIES 23 ENSGT00890000139436.B ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT00590000083094.a.b #34 ENSGT01100000263477.B.d.b #36 Microbat DUPLICATION Microbat MODERN SPECIES 1230 ENSMLUG00000010218 ENSMLUG00000012244 ENSMLUG00000029285 ENSMLUG00000027669 ENSMLUG00000005598 ENSMLUG00000025631 ENSMLUG00000006837 #22 ENSMLUG00000016140 ENSMLUG00000030553 Microbat MODERN SPECIES 943 ACTR2 (ENSMLUG00000005227) RAB1A (ENSMLUG00000009489) CEP68 (ENSMLUG00000002435) SLC1A4 (ENSMLUG00000002430) SERTAD2 (ENSMLUG00000013854) AFTPH (ENSMLUG00000008012) LGALSL (ENSMLUG00000008001) ENSMLUG00000015944 PELI1 (ENSMLUG00000003152) VPS54 (ENSMLUG00000003130) UGP2 (ENSMLUG00000003123) MDH1 (ENSMLUG00000002352) WDPCP (ENSMLUG00000002336) OTX1 (ENSMLUG00000002330) EHBP1 (ENSMLUG00000002314) ENSMLUG00000027762 #22 B3GNT2 (ENSMLUG00000009924) ENSMLUG00000022697 CCT4 (ENSMLUG00000016138) FAM161A (ENSMLUG00000030514) XPO1 (ENSMLUG00000010670) USP34 (ENSMLUG00000003414) ENSMLUG00000027445 ENSMLUG00000003408 C2orf74 (ENSMLUG00000027969) SANBR (ENSMLUG00000007627) PEX13 (ENSMLUG00000025131) PUS10 (ENSMLUG00000000082) REL (ENSMLUG00000007454) PAPOLG (ENSMLUG00000009853) ENSMLUG00000014903 Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 18 FOXP2 (ENSRFEG00010019612) MDFIC (ENSRFEG00010019544) TFEC (ENSRFEG00010019376) ENSRFEG00010019318 TES (ENSRFEG00010019300) CAV2 (ENSRFEG00010019273) CAV1 (ENSRFEG00010019224) MET (ENSRFEG00010019152) CAPZA2 (ENSRFEG00010019032) ST7 (ENSRFEG00010018747) WNT2 (ENSRFEG00010018681) ASZ1 (ENSRFEG00010018560) ENSRFEG00010018517 CFTR (ENSRFEG00010017672) CTTNBP2 (ENSRFEG00010017601) ENSRFEG00010017515 #22 ENSRFEG00010017376 ENSRFEG00010017356 ENSRFEG00010017340 KCND2 (ENSRFEG00010017250) #25 TSPAN12 (ENSRFEG00010017208) #26 ING3 (ENSRFEG00010017054) #27 CPED1 (ENSRFEG00010016992) #28 WNT16 (ENSRFEG00010016926) #29 FAM3C (ENSRFEG00010016879) #30 PTPRZ1 (ENSRFEG00010016626) #31 AASS (ENSRFEG00010016545) #32 FEZF1 (ENSRFEG00010016383) #33 RNF133 (ENSRFEG00010016316) CADPS2 (ENSRFEG00010015967) #34 TAS2R16 (ENSRFEG00010015907) #36 Greater horseshoe bat MODERN SPECIES 18 CAPZA2 (ENSRFEG00010019032) MET (ENSRFEG00010019152) CAV1 (ENSRFEG00010019224) CAV2 (ENSRFEG00010019273) TES (ENSRFEG00010019300) ENSRFEG00010019318 TFEC (ENSRFEG00010019376) MDFIC (ENSRFEG00010019544) FOXP2 (ENSRFEG00010019612) PPP1R3A (ENSRFEG00010019863) ENSRFEG00010019896 SMIM30 (ENSRFEG00010019921) GPR85 (ENSRFEG00010019929) BMT2 (ENSRFEG00010019948) TMEM168 (ENSRFEG00010019981) ENSRFEG00010020008 #22 Equus ANCESTRAL SPECIES 13 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01100000263477.B.d.b #36 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00390000014326 ENSGT00390000008099 Donkey MODERN SPECIES SMIM30 (ENSEASG00005004307) PPP1R3A (ENSEASG00005008800) FOXP2 (ENSEASG00005008813) MDFIC (ENSEASG00005025429) TFEC (ENSEASG00005036487) TES (ENSEASG00005008832) ENSEASG00005034179 CAV1 (ENSEASG00005030696) MET (ENSEASG00005008840) CAPZA2 (ENSEASG00005008845) ST7 (ENSEASG00005008859) WNT2 (ENSEASG00005008889) ASZ1 (ENSEASG00005008894) CFTR (ENSEASG00005008909) CTTNBP2 (ENSEASG00005008929) LSM8 (ENSEASG00005027658) #22 ENSEASG00005008937 KCND2 (ENSEASG00005008938) #25 TSPAN12 (ENSEASG00005008941) #26 ING3 (ENSEASG00005008942) #27 ENSEASG00005028595 #28 ENSEASG00005008958 #28 WNT16 (ENSEASG00005008977) #29 FAM3C (ENSEASG00005008980) #30 PTPRZ1 (ENSEASG00005008993) #31 AASS (ENSEASG00005009016) #32 FEZF1 (ENSEASG00005009026) #33 CADPS2 (ENSEASG00005009041) #34 TAS2R16 (ENSEASG00005009304) #36 SLC13A1 (ENSEASG00005009316) #37 IQUB (ENSEASG00005009328) Horse MODERN SPECIES 25 FOXP2 (ENSECAG00000023867) MDFIC (ENSECAG00000013772) TFEC (ENSECAG00000013937) TES (ENSECAG00000016917) CAV2 (ENSECAG00000037857) CAV1 (ENSECAG00000009134) MET (ENSECAG00000010385) CAPZA2 (ENSECAG00000021693) ST7 (ENSECAG00000008375) ENSECAG00000059035 WNT2 (ENSECAG00000024641) ENSECAG00000043879 ASZ1 (ENSECAG00000011002) CFTR (ENSECAG00000009139) CTTNBP2 (ENSECAG00000025076) LSM8 (ENSECAG00000024025) #22 KCND2 (ENSECAG00000002703) #25 TSPAN12 (ENSECAG00000001545) #26 ING3 (ENSECAG00000008147) #27 CPED1 (ENSECAG00000017094) #28 FAM3C (ENSECAG00000008527) #30 WNT16 (ENSECAG00000006880) #29 PTPRZ1 (ENSECAG00000011293) #31 AASS (ENSECAG00000021479) #32 FEZF1 (ENSECAG00000022989) #33 CADPS2 (ENSECAG00000024021) #34 SLC13A1 (ENSECAG00000020615) #37 IQUB (ENSECAG00000005249) ASB15 (ENSECAG00000011379) LMOD2 (ENSECAG00000057098) WASL (ENSECAG00000015578) Carnivora ANCESTRAL SPECIES 15 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00390000007479.y.b ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00940000163928 ENSGT00590000083094.a.b #34 ENSGT00940000163382 #35 ENSGT01030000234550.a.a.d.a.a #37 Felidae ANCESTRAL SPECIES 13 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00390000007479.y.b ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00390000015224.c.b.b.a.b.a ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163382 #35 ENSGT01030000234550.a.a.d.a.a #37 Panthera ANCESTRAL SPECIES 1 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00900000143058 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00390000015224.c.b.b.a.b.a ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163382 #35 ENSGT01030000234550.a.a.d.a.a #37 Panthera_a ANCESTRAL SPECIES ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00900000143058 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00390000015224.c.b.b.a.b.a ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT00940000163382 #35 ENSGT01030000234550.a.a.d.a.a #37 leopard MODERN SPECIES 72 FOXP2 (ENSPPRG00000000808) MDFIC (ENSPPRG00000000981) TFEC (ENSPPRG00000001348) TES (ENSPPRG00000001505) CAV2 (ENSPPRG00000001790) CAV1 (ENSPPRG00000001995) ENSPPRG00000002566 ENSPPRG00000018383 CAPZA2 (ENSPPRG00000002625) ST7 (ENSPPRG00000004797) WNT2 (ENSPPRG00000005517) ASZ1 (ENSPPRG00000005580) CFTR (ENSPPRG00000005895) ENSPPRG00000005928 CTTNBP2 (ENSPPRG00000006253) LSM8 (ENSPPRG00000006444) #22 ENSPPRG00000006566 lion MODERN SPECIES 2 SMIM30 (ENSPLOG00000002985) PPP1R3A (ENSPLOG00000003004) FOXP2 (ENSPLOG00000003059) MDFIC (ENSPLOG00000003217) TFEC (ENSPLOG00000003253) TES (ENSPLOG00000003361) CAV2 (ENSPLOG00000003376) CAV1 (ENSPLOG00000003388) ENSPLOG00000003404 CAPZA2 (ENSPLOG00000003487) ST7 (ENSPLOG00000003747) WNT2 (ENSPLOG00000004225) ASZ1 (ENSPLOG00000004231) CFTR (ENSPLOG00000004296) CTTNBP2 (ENSPLOG00000004483) LSM8 (ENSPLOG00000004510) #22 ENSPLOG00000004527 ENSPLOG00000004535 ENSPLOG00000004539 KCND2 (ENSPLOG00000004548) #25 TSPAN12 (ENSPLOG00000004557) #26 ING3 (ENSPLOG00000004574) #27 CPED1 (ENSPLOG00000004600) #28 WNT16 (ENSPLOG00000004662) #29 FAM3C (ENSPLOG00000004694) #30 PTPRZ1 (ENSPLOG00000004914) #31 AASS (ENSPLOG00000005333) #32 FEZF1 (ENSPLOG00000005395) #33 CADPS2 (ENSPLOG00000005636) #34 SLC13A1 (ENSPLOG00000006227) #37 ENSPLOG00000006309 Tiger MODERN SPECIES 296 FOXP2 (ENSPTIG00000005044) MDFIC (ENSPTIG00000017402) TFEC (ENSPTIG00000018257) TES (ENSPTIG00000021347) CAV2 (ENSPTIG00000021626) CAV1 (ENSPTIG00000021784) ENSPTIG00000021973 ENSPTIG00000002142 CAPZA2 (ENSPTIG00000022058) ST7 (ENSPTIG00000022098) WNT2 (ENSPTIG00000014444) ASZ1 (ENSPTIG00000014931) CFTR (ENSPTIG00000017030) ENSPTIG00000017786 CTTNBP2 (ENSPTIG00000019650) LSM8 (ENSPTIG00000004722) #22 ENSPTIG00000005580 KCND2 (ENSPTIG00000006572) #25 TSPAN12 (ENSPTIG00000007270) #26 ING3 (ENSPTIG00000008202) #27 CPED1 (ENSPTIG00000010438) #28 WNT16 (ENSPTIG00000013116) #29 FAM3C (ENSPTIG00000014410) #30 PTPRZ1 (ENSPTIG00000014785) #31 AASS (ENSPTIG00000020365) #32 FEZF1 (ENSPTIG00000006097) #33 CADPS2 (ENSPTIG00000008072) #34 ENSPTIG00000019227 #35 SLC13A1 (ENSPTIG00000019436) #37 IQUB (ENSPTIG00000020106) NDUFA5 (ENSPTIG00000021225) Cat MODERN SPECIES 1 PPP1R3A (ENSFCAG00000026838) FOXP2 (ENSFCAG00000006921) MDFIC (ENSFCAG00000046079) TFEC (ENSFCAG00000027627) TES (ENSFCAG00000029911) CAV2 (ENSFCAG00000023324) CAV1 (ENSFCAG00000034785) MET (ENSFCAG00000009534) CAPZA2 (ENSFCAG00000027103) ST7 (ENSFCAG00000013253) WNT2 (ENSFCAG00000036421) ASZ1 (ENSFCAG00000023842) CFTR (ENSFCAG00000014955) CTTNBP2 (ENSFCAG00000014956) ENSFCAG00000032304 LSM8 (ENSFCAG00000036620) #22 ENSFCAG00000031973 ENSFCAG00000047748 ENSFCAG00000038564 KCND2 (ENSFCAG00000007877) #25 TSPAN12 (ENSFCAG00000023943) #26 ING3 (ENSFCAG00000029472) #27 CPED1 (ENSFCAG00000023648) #28 FAM3C (ENSFCAG00000023087) #30 WNT16 (ENSFCAG00000029148) #29 ENSFCAG00000030800 PTPRZ1 (ENSFCAG00000015760) #31 AASS (ENSFCAG00000029895) #32 FEZF1 (ENSFCAG00000013521) #33 CADPS2 (ENSFCAG00000000574) #34 SLC13A1 (ENSFCAG00000013589) #37 Caniformia ANCESTRAL SPECIES 11 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00390000007479.y.b ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00390000007479.y.b.a ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00940000153661.b.b.m ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00390000014326 Mustelinae ANCESTRAL SPECIES 9 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00390000007479.y.b.a ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00940000153661.b.b.m ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00390000014326 Ferret MODERN SPECIES 168 PPP1R3A (ENSMPUG00000007681) FOXP2 (ENSMPUG00000007316) MDFIC (ENSMPUG00000007309) ENSMPUG00000007300 TFEC (ENSMPUG00000007248) TES (ENSMPUG00000007238) CAV2 (ENSMPUG00000007232) CAV1 (ENSMPUG00000007224) MET (ENSMPUG00000007199) ST7 (ENSMPUG00000007184) WNT2 (ENSMPUG00000007172) ASZ1 (ENSMPUG00000007155) CFTR (ENSMPUG00000007138) CTTNBP2 (ENSMPUG00000007124) ENSMPUG00000007110 ENSMPUG00000007100 #22 ENSMPUG00000007093 ENSMPUG00000007078 KCND2 (ENSMPUG00000007070) #25 ENSMPUG00000007063 TSPAN12 (ENSMPUG00000007059) #26 ING3 (ENSMPUG00000007054) #27 CPED1 (ENSMPUG00000006988) #28 WNT16 (ENSMPUG00000006909) #29 FAM3C (ENSMPUG00000006897) #30 PTPRZ1 (ENSMPUG00000006874) #31 AASS (ENSMPUG00000006862) #32 FEZF1 (ENSMPUG00000006851) #33 CADPS2 (ENSMPUG00000006834) #34 SLC13A1 (ENSMPUG00000006826) #37 IQUB (ENSMPUG00000006817) American mink MODERN SPECIES 3 PPP1R3A (ENSNVIG00000003288) FOXP2 (ENSNVIG00000002817) MDFIC (ENSNVIG00000002794) TFEC (ENSNVIG00000002689) TES (ENSNVIG00000002631) CAV2 (ENSNVIG00000002622) CAV1 (ENSNVIG00000002597) ENSNVIG00000002563 ENSNVIG00000002532 CAPZA2 (ENSNVIG00000002498) ST7 (ENSNVIG00000002263) WNT2 (ENSNVIG00000002216) ASZ1 (ENSNVIG00000002205) CFTR (ENSNVIG00000002052) CTTNBP2 (ENSNVIG00000002011) LSM8 (ENSNVIG00000001976) #22 ENSNVIG00000001960 ENSNVIG00000001954 KCND2 (ENSNVIG00000001932) #25 TSN12 (ENSNVIG00000001909) #26 ING3 (ENSNVIG00000001859) #27 CPED1 (ENSNVIG00000001760) #28 WNT16 (ENSNVIG00000001731) #29 FAM3C (ENSNVIG00000001700) #30 PTPRZ1 (ENSNVIG00000001621) #31 AASS (ENSNVIG00000001583) #32 FEZF1 (ENSNVIG00000001557) #33 ENSNVIG00000001541 CADPS2 (ENSNVIG00000001278) #34 SLC13A1 (ENSNVIG00000001237) #37 IQUB (ENSNVIG00000001202) Ursidae ANCESTRAL SPECIES 12 ENSGT00400000023684 ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685.c ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00490000043329.a.a.a.pb.c.b ENSGT01020000230614 ENSGT00940000155472.a.a #25 ENSGT01010000229956 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 Ursus ANCESTRAL SPECIES 82 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022 ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293.i ENSGT00730000111212 #22 ENSGT00940000161777.b ENSGT00490000043329.a.a.a.pb.c.b ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216 #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00390000014326 ENSGT00390000008099 ENSGT00940000157073 American black bear DUPLICATION American black bear MODERN SPECIES 2339 ENSUAMG00000006942 #22 ENSUAMG00000006943 #22 ENSUAMG00000006945 American black bear MODERN SPECIES 2339 ENSUAMG00000006945 ENSUAMG00000006943 #22 ENSUAMG00000006942 #22 Polar bear MODERN SPECIES 281 TFEC (ENSUMAG00000002162) TES (ENSUMAG00000002178) ENSUMAG00000002184 CAV1 (ENSUMAG00000002191) MET (ENSUMAG00000002307) CAPZA2 (ENSUMAG00000002886) ST7 (ENSUMAG00000002912) WNT2 (ENSUMAG00000002965) ASZ1 (ENSUMAG00000002973) CFTR (ENSUMAG00000003001) CTTNBP2 (ENSUMAG00000003029) LSM8 (ENSUMAG00000003073) #22 ENSUMAG00000003079 ENSUMAG00000003108 ENSUMAG00000003110 TSPAN12 (ENSUMAG00000003123) #26 ING3 (ENSUMAG00000003142) #27 CPED1 (ENSUMAG00000003165) #28 WNT16 (ENSUMAG00000003225) #29 FAM3C (ENSUMAG00000003239) #30 PTPRZ1 (ENSUMAG00000003260) #31 AASS (ENSUMAG00000003535) #32 FEZF1 (ENSUMAG00000004731) #33 CADPS2 (ENSUMAG00000004849) #34 ENSUMAG00000005539 #37 IQUB (ENSUMAG00000005549) ENSUMAG00000005561 Giant Panda MODERN SPECIES SMIM30 (ENSAMEG00000019099) PPP1R3A (ENSAMEG00000002577) FOXP2 (ENSAMEG00000002526) MDFIC (ENSAMEG00000027010) TFEC (ENSAMEG00000018238) TES (ENSAMEG00000018237) CAV2 (ENSAMEG00000029109) CAV1 (ENSAMEG00000027933) MET (ENSAMEG00000001314) CAPZA2 (ENSAMEG00000001306) ST7 (ENSAMEG00000001267) WNT2 (ENSAMEG00000001256) ASZ1 (ENSAMEG00000001244) CFTR (ENSAMEG00000001184) CTTNBP2 (ENSAMEG00000001163) LSM8 (ENSAMEG00000001162) #22 ENSAMEG00000001159 ENSAMEG00000027977 ENSAMEG00000031336 KCND2 (ENSAMEG00000020256) #25 ENSAMEG00000029289 TSPAN12 (ENSAMEG00000005955) #26 ING3 (ENSAMEG00000005975) #27 CPED1 (ENSAMEG00000006006) #28 WNT16 (ENSAMEG00000006022) #29 FAM3C (ENSAMEG00000006035) #30 PTPRZ1 (ENSAMEG00000004272) #31 AASS (ENSAMEG00000004321) #32 FEZF1 (ENSAMEG00000004386) #33 CADPS2 (ENSAMEG00000004390) #34 SLC13A1 (ENSAMEG00000004466) #37 Canidae ANCESTRAL SPECIES 52 ENSGT00410000028909 ENSGT00940000156579 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d ENSGT00940000156369 ENSGT00940000160670 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00530000064469 ENSGT00940000157592 ENSGT00390000001830.j ENSGT00940000157299 ENSGT00940000156973 ENSGT00730000111212 #22 ENSGT00940000154997 ENSGT00940000154585.a ENSGT01030000234638.b.b.c.b ENSGT00390000014003 ENSGT00390000015874 ENSGT00390000012541 ENSGT00940000153662.B ENSGT00940000160006 ENSGT00940000159243 ENSGT00390000016521 ENSGT00940000165378 ENSGT00940000159623 ENSGT00530000063749.c.b ENSGT00390000004950 ENSGT00940000157873 Red fox MODERN SPECIES 11 FAM174A (ENSVVUG00000020104) ST8SIA4 (ENSVVUG00000020099) SLCO4C1 (ENSVVUG00000020047) ENSVVUG00000020035 SLCO6A1 (ENSVVUG00000020025) PAM (ENSVVUG00000019687) GIN1 (ENSVVUG00000019618) PPIP5K2 (ENSVVUG00000013495) CUNH5orf30 (ENSVVUG00000013357) ENSVVUG00000013337 NUDT12 (ENSVVUG00000013331) ENSVVUG00000013325 ENSVVUG00000013293 ENSVVUG00000013288 EFNA5 (ENSVVUG00000013271) ENSVVUG00000013248 #22 ENSVVUG00000013246 ENSVVUG00000013220 FER (ENSVVUG00000013141) PJA2 (ENSVVUG00000013092) MAN2A1 (ENSVVUG00000013038) ENSVVUG00000013011 TMEM232 (ENSVVUG00000012986) SLC25A46 (ENSVVUG00000012972) TSLP (ENSVVUG00000012958) WDR36 (ENSVVUG00000012684) CAMK4 (ENSVVUG00000012620) STARD4 (ENSVVUG00000012606) EPB41L4A (ENSVVUG00000012521) APC (ENSVVUG00000012447) SRP19 (ENSVVUG00000012423) Canis_lupus DUPLICATION Canis_lupus DUPLICATION Canis_lupus ANCESTRAL SPECIES 9 ENSGT00940000156579 ENSGT00390000017282.o ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d ENSGT00940000156369 ENSGT00940000160670 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00530000064469 ENSGT00940000157592 ENSGT00390000001830.j ENSGT00940000157299 ENSGT00940000156973 ENSGT00730000111212.q.a #22 ENSGT00940000154997 ENSGT00940000154585.a ENSGT01030000234638.b.b.c.b ENSGT00390000014003 ENSGT00390000015874 ENSGT00390000012541 ENSGT00940000153662.B ENSGT00940000160006 ENSGT00940000159243 ENSGT00390000016521 ENSGT00940000165378 ENSGT00940000159623 ENSGT00530000063749.c.b ENSGT00390000004950.hb.a ENSGT00940000157873 Dingo MODERN SPECIES 138 PAM (ENSCAFG00020012061) GIN1 (ENSCAFG00020012078) PPIP5K2 (ENSCAFG00020012160) MACIR (ENSCAFG00020012590) ENSCAFG00020012597 ENSCAFG00020012606 NUDT12 (ENSCAFG00020012607) ENSCAFG00020012617 ENSCAFG00020012622 ENSCAFG00020012646 ENSCAFG00020012662 ENSCAFG00020012690 ENSCAFG00020012708 EFNA5 (ENSCAFG00020012730) FBXL17 (ENSCAFG00020012795) ENSCAFG00020012800 #22 ENSCAFG00020012804 ENSCAFG00020012810 FER (ENSCAFG00020012851) PJA2 (ENSCAFG00020012927) MAN2A1 (ENSCAFG00020012979) TMEM232 (ENSCAFG00020013399) SLC25A46 (ENSCAFG00020013422) TSLP (ENSCAFG00020013428) WDR36 (ENSCAFG00020013444) CAMK4 (ENSCAFG00020013830) STARD4 (ENSCAFG00020014160) ENSCAFG00020014167 EPB41L4A (ENSCAFG00020014184) APC (ENSCAFG00020014204) ENSCAFG00020014267 Dog MODERN SPECIES 22 CHD1 (ENSCAFG00845002210) ENSCAFG00845002178 FAM174A (ENSCAFG00845002170) ST8SIA4 (ENSCAFG00845002101) SLCO4C1 (ENSCAFG00845002027) SLCO6A1 (ENSCAFG00845001964) PAM (ENSCAFG00845001601) GIN1 (ENSCAFG00845001384) PPIP5K2 (ENSCAFG00845001037) MACIR (ENSCAFG00845000857) ENSCAFG00845000832 NUDT12 (ENSCAFG00845000770) ENSCAFG00845000704 ENSCAFG00845000582 EFNA5 (ENSCAFG00845000512) LSM8 (ENSCAFG00845000484) #22 FBXL17 (ENSCAFG00845000464) FER (ENSCAFG00845000339) PJA2 (ENSCAFG00845000212) MAN2A1 (ENSCAFG00845004163) TMEM232 (ENSCAFG00845003944) SLC25A46 (ENSCAFG00845003894) ENSCAFG00845003872 WDR36 (ENSCAFG00845003859) CAMK4 (ENSCAFG00845003821) STARD4 (ENSCAFG00845003796) NREP (ENSCAFG00845003745) ENSCAFG00845003705 EPB41L4A (ENSCAFG00845003607) APC (ENSCAFG00845003519) SRP19 (ENSCAFG00845003444) Canis_lupus ANCESTRAL SPECIES 24 ENSGT00890000139436.B ENSGT00940000157682.B ENSGT00940000155480 ENSGT00940000158685 ENSGT00940000159404 ENSGT00940000155993 ENSGT00950000183006.A.b ENSGT00950000183006.B.f.b.a ENSGT00940000158022.a ENSGT00950000183119.a.e.b ENSGT00390000000873.a.b ENSGT00940000159231 ENSGT00880000138051.a ENSGT00940000158567 ENSGT00940000158293 ENSGT00730000111212.q.b #22 ENSGT00940000161777.b ENSGT00940000155472.a.a #25 ENSGT00510000047764 #26 ENSGT00940000156619 #27 ENSGT00390000015216.q.a #28 ENSGT00940000157480 #29 ENSGT00950000183004.a.b.a.a #30 ENSGT00940000155529.C #31 ENSGT00390000013249 #32 ENSGT00940000159477 #33 ENSGT00940000163928 ENSGT00940000163382 #35 ENSGT00590000083094.a.b #34 ENSGT01030000234550.a.a.d.a.a #37 ENSGT00390000014326 Dingo MODERN SPECIES 288 ENSCAFG00020007266 MDFIC (ENSCAFG00020007307) ENSCAFG00020007316 TFEC (ENSCAFG00020007323) TES (ENSCAFG00020007337) ENSCAFG00020007342 CAV2 (ENSCAFG00020007355) CAV1 (ENSCAFG00020007358) MET (ENSCAFG00020007371) CAPZA2 (ENSCAFG00020007382) ST7 (ENSCAFG00020007405) WNT2 (ENSCAFG00020007444) ASZ1 (ENSCAFG00020007449) CFTR (ENSCAFG00020007486) CTTNBP2 (ENSCAFG00020007530) ENSCAFG00020007643 #22 ENSCAFG00020007647 ENSCAFG00020007658 TSPAN12 (ENSCAFG00020007671) #26 ENSCAFG00020007677 #27 ENSCAFG00020007679 #28 Canis_lupus ANCESTRAL SPECIES ENSGT00730000111212.r #22 Dog MODERN SPECIES 5 BMT2 (ENSCAFG00845030359) GPR85 (ENSCAFG00845005755) PPP1R3A (ENSCAFG00845005952) FOXP2 (ENSCAFG00845006016) MDFIC (ENSCAFG00845006114) TFEC (ENSCAFG00845006297) TES (ENSCAFG00845006418) CAV2 (ENSCAFG00845006745) CAV1 (ENSCAFG00845006847) MET (ENSCAFG00845007244) CAPZA2 (ENSCAFG00845007934) ST7 (ENSCAFG00845008329) WNT2 (ENSCAFG00845008849) ASZ1 (ENSCAFG00845008921) CFTR (ENSCAFG00845009171) ENSCAFG00845010283 #22 ENSCAFG00845010332 ENSCAFG00845010446 #25 TSPAN12 (ENSCAFG00845010513) #26 ING3 (ENSCAFG00845010632) #27 CPED1 (ENSCAFG00845010739) #28 WNT16 (ENSCAFG00845010924) #29 FAM3C (ENSCAFG00845010960) #30 PTPRZ1 (ENSCAFG00845012086) #31 AASS (ENSCAFG00845014560) #32 CADPS2 (ENSCAFG00845014715) #34 SLC13A1 (ENSCAFG00845014948) #37 ENSCAFG00845015049 Eulipotyphla ANCESTRAL SPECIES ENSGT00730000111212 #22 Common shrew MODERN SPECIES 9477 ENSSARG00000009628 #22