Bilateria ANCESTRAL SPECIES ENSGT00730000111078 #22 Chordata ANCESTRAL SPECIES ENSGT00730000111078 #22 Vertebrata ANCESTRAL SPECIES ENSGT00730000111078 #22 Gnathostomata ANCESTRAL SPECIES 181 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000158196 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Euteleostomi ANCESTRAL SPECIES 61 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Sarcopterygii ANCESTRAL SPECIES 88 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Tetrapoda ANCESTRAL SPECIES 8 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Amniota ANCESTRAL SPECIES 9 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000169329 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Mammalia ANCESTRAL SPECIES 5 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000169329 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00910000148470 ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Theria ANCESTRAL SPECIES 3 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000167450 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000169329 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Eutheria ANCESTRAL SPECIES ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000167450 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00910000148470 ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Boreoeutheria ANCESTRAL SPECIES ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000167450 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00910000148470 ENSGT01010000228719 ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Euarchontoglires ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00910000148470 ENSGT01010000228719 ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Primates ANCESTRAL SPECIES 4 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00910000148470 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00910000148470 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Simiiformes ANCESTRAL SPECIES 3 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00910000148470 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00910000147273 ENSGT00950000182964.a.a Catarrhini ANCESTRAL SPECIES 3 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00910000147273 ENSGT00950000182964.a.a Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00940000155155.d ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00910000147273 Rhinopithecus ANCESTRAL SPECIES 489 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00940000155155.d ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 Black snub-nosed monkey MODERN SPECIES 632 ZRANB2 (ENSRBIG00000025103) #22 PTGER3 (ENSRBIG00000035240) #23 ENSRBIG00000029207 #24 CTH (ENSRBIG00000026417) #25 PRSS38 (ENSRBIG00000029350) #26 SNAP47 (ENSRBIG00000029675) #27 JMJD4 (ENSRBIG00000039645) #28 ENSRBIG00000034362 #29 ENSRBIG00000025645 #30 ZNF678 (ENSRBIG00000041185) #31 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 3017 ENSRROG00000036217 ENSRROG00000025998 #22 PTGER3 (ENSRROG00000039931) #23 Golden snub-nosed monkey MODERN SPECIES 1805 SMCP (ENSRROG00000024262) LCE1A (ENSRROG00000033697) ENSRROG00000044055 KPRP (ENSRROG00000034558) C1orf68 (ENSRROG00000034194) ENSRROG00000032064 #22 CRNN (ENSRROG00000023487) ENSRROG00000023486 Cercopithecinae DUPLICATION Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.m.a #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00940000155155.d ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00910000147273 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.m.a #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00940000155155.d ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00940000154430.e.a ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b Macaca ANCESTRAL SPECIES ENSGT00950000183113.a.b.p ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.m.a #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00940000155155.d ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00390000016438.l ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00940000154430.e.a ENSGT00390000005897 ENSGT00940000164094 Macaca_a ANCESTRAL SPECIES ENSGT00730000111078.m.a #22 Crab-eating macaque MODERN SPECIES ST6GALNAC3 (ENSMFAG00000038282) ENSMFAG00000060954 ASB17 (ENSMFAG00000044899) MSH4 (ENSMFAG00000038806) ACADM (ENSMFAG00000032655) SLC44A5 (ENSMFAG00000038111) LHX8 (ENSMFAG00000040799) TYW3 (ENSMFAG00000003496) ERICH3 (ENSMFAG00000036577) TNNI3K (ENSMFAG00000001777) LRRC53 (ENSMFAG00000038246) LRRIQ3 (ENSMFAG00000042954) ENSMFAG00000061527 NEGR1 (ENSMFAG00000034696) ENSMFAG00000065809 ENSMFAG00000003326 #22 PTGER3 (ENSMFAG00000040520) #23 CTH (ENSMFAG00000040329) #25 ANKRD13C (ENSMFAG00000042830) ENSMFAG00000058749 SRSF11 (ENSMFAG00000043405) LRRC40 (ENSMFAG00000028307) LRRC7 (ENSMFAG00000031304) ENSMFAG00000036815 DEPDC1 (ENSMFAG00000036197) RPE65 (ENSMFAG00000043407) WLS (ENSMFAG00000030065) DIRAS3 (ENSMFAG00000059613) GADD45A (ENSMFAG00000043026) SERBP1 (ENSMFAG00000036635) IL12RB2 (ENSMFAG00000044595) Pig-tailed macaque MODERN SPECIES 264 ENSMNEG00000039308 ENSMNEG00000042080 #22 PTGER3 (ENSMNEG00000005617) #23 ENSMNEG00000027941 #24 CTH (ENSMNEG00000011769) #25 ENSMNEG00000031546 ENSMNEG00000031248 ENSMNEG00000030923 ANKRD13C (ENSMNEG00000040599) SRSF11 (ENSMNEG00000029428) LRRC40 (ENSMNEG00000042660) LRRC7 (ENSMNEG00000040393) ENSMNEG00000015469 DEPDC1 (ENSMNEG00000039427) RPE65 (ENSMNEG00000034651) ENSMNEG00000039124 WLS (ENSMNEG00000031027) Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.m.a #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00940000155155.d ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00940000154430.e.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Cercopithecinae_d ANCESTRAL SPECIES 19 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.m.a #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00940000155155.d ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00940000165544 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00940000154430.e.a ENSGT00390000005897 ENSGT01100000263497.E.b Sooty mangabey MODERN SPECIES 238 ST6GALNAC3 (ENSCATG00000032996) ASB17 (ENSCATG00000033818) MSH4 (ENSCATG00000035706) RABGGTB (ENSCATG00000036765) ACADM (ENSCATG00000038563) SLC44A5 (ENSCATG00000042746) LHX8 (ENSCATG00000037914) TYW3 (ENSCATG00000044397) CRYZ (ENSCATG00000031359) ERICH3 (ENSCATG00000031448) TNNI3K (ENSCATG00000032358) LRRC53 (ENSCATG00000041739) FPGT (ENSCATG00000044819) LRRIQ3 (ENSCATG00000035446) NEGR1 (ENSCATG00000044090) ZRANB2 (ENSCATG00000025001) #22 PTGER3 (ENSCATG00000041781) #23 ENSCATG00000040340 #24 CTH (ENSCATG00000043574) #25 ENSCATG00000031068 ENSCATG00000035218 ANKRD13C (ENSCATG00000014535) SRSF11 (ENSCATG00000043613) LRRC40 (ENSCATG00000004246) LRRC7 (ENSCATG00000042304) ENSCATG00000039264 DEPDC1 (ENSCATG00000004444) RPE65 (ENSCATG00000021512) WLS (ENSCATG00000002594) ENSCATG00000040157 GNG12 (ENSCATG00000012440) Drill MODERN SPECIES 96 ASB17 (ENSMLEG00000038561) MSH4 (ENSMLEG00000031689) RABGGTB (ENSMLEG00000037395) ACADM (ENSMLEG00000041193) SLC44A5 (ENSMLEG00000038534) LHX8 (ENSMLEG00000032635) TYW3 (ENSMLEG00000041647) CRYZ (ENSMLEG00000042810) ERICH3 (ENSMLEG00000029089) LRRC53 (ENSMLEG00000034956) TNNI3K (ENSMLEG00000038358) FPGT (ENSMLEG00000028443) LRRIQ3 (ENSMLEG00000042524) NEGR1 (ENSMLEG00000033755) ENSMLEG00000017697 ZRANB2 (ENSMLEG00000036639) #22 PTGER3 (ENSMLEG00000035122) #23 ENSMLEG00000039092 #24 Olive baboon MODERN SPECIES RABGGTB (ENSPANG00000026215) ACADM (ENSPANG00000005881) ENSPANG00000037198 SLC44A5 (ENSPANG00000022215) LHX8 (ENSPANG00000020401) ENSPANG00000048769 TYW3 (ENSPANG00000013397) CRYZ (ENSPANG00000000464) ERICH3 (ENSPANG00000009972) LRRC53 (ENSPANG00000023960) TNNI3K (ENSPANG00000022216) LRRIQ3 (ENSPANG00000017176) ENSPANG00000043063 ENSPANG00000049584 NEGR1 (ENSPANG00000033595) ZRANB2 (ENSPANG00000013398) #22 PTGER3 (ENSPANG00000006005) #23 ENSPANG00000044968 CTH (ENSPANG00000009664) #25 ANKRD13C (ENSPANG00000022425) SRSF11 (ENSPANG00000018677) LRRC40 (ENSPANG00000004753) LRRC7 (ENSPANG00000012864) DEPDC1 (ENSPANG00000020338) RPE65 (ENSPANG00000007871) WLS (ENSPANG00000022426) DIRAS3 (ENSPANG00000038255) ENSPANG00000039979 GNG12 (ENSPANG00000050175) GADD45A (ENSPANG00000005666) SERBP1 (ENSPANG00000005883) Cercopithecinae ANCESTRAL SPECIES ENSGT00730000111078.m.b #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00730000111078.m.b #22 Macaca ANCESTRAL SPECIES ENSGT00730000111078.m.b #22 Macaca_a ANCESTRAL SPECIES ENSGT00730000111078.m.b #22 Crab-eating macaque MODERN SPECIES 175 ENSMFAG00000061426 ENSMFAG00000049766 ZNF711 (ENSMFAG00000037179) ENSMFAG00000043804 SATL1 (ENSMFAG00000042054) APOOL (ENSMFAG00000042547) ENSMFAG00000063039 ENSMFAG00000048579 ENSMFAG00000056508 HDX (ENSMFAG00000003281) RPS6KA6 (ENSMFAG00000045848) CYLC1 (ENSMFAG00000044830) ENSMFAG00000048140 POU3F4 (ENSMFAG00000027128) ENSMFAG00000053410 ENSMFAG00000035175 #22 ENSMFAG00000057041 ENSMFAG00000052377 ENSMFAG00000064912 ENSMFAG00000003130 ENSMFAG00000057440 SH3BGRL (ENSMFAG00000031027) ENSMFAG00000064363 HMGN5 (ENSMFAG00000043155) ENSMFAG00000065005 ENSMFAG00000046303 BRWD3 (ENSMFAG00000043437) TENT5D (ENSMFAG00000059694) ENSMFAG00000058505 TBX22 (ENSMFAG00000000575) ENSMFAG00000050209 Pig-tailed macaque MODERN SPECIES 588 AMDHD1 (ENSMNEG00000029405) HAL (ENSMNEG00000030888) LTA4H (ENSMNEG00000033752) ELK3 (ENSMNEG00000040169) CDK17 (ENSMNEG00000028105) CFAP54 (ENSMNEG00000029580) NEDD1 (ENSMNEG00000038563) ENSMNEG00000034840 SATL1 (ENSMNEG00000039957) ENSMNEG00000029877 ENSMNEG00000038005 HDX (ENSMNEG00000034200) RPS6KA6 (ENSMNEG00000028869) CYLC1 (ENSMNEG00000035819) POU3F4 (ENSMNEG00000024620) ENSMNEG00000005850 #22 Vervet Monkey MODERN SPECIES 203 ENSCSAG00000010424 PABPC5 (ENSCSAG00000000065) TGIF2LX (ENSCSAG00000000068) CPXCR1 (ENSCSAG00000010435) ENSCSAG00000000071 KLHL4 (ENSCSAG00000010443) DACH2 (ENSCSAG00000010460) CHM (ENSCSAG00000010508) ENSCSAG00000010519 ZNF711 (ENSCSAG00000010527) SATL1 (ENSCSAG00000010536) HDX (ENSCSAG00000010546) RPS6KA6 (ENSCSAG00000010555) CYLC1 (ENSCSAG00000010571) POU3F4 (ENSCSAG00000000074) ENSCSAG00000010588 #22 SH3BGRL (ENSCSAG00000010614) HMGN5 (ENSCSAG00000010621) ENSCSAG00000000076 BRWD3 (ENSCSAG00000010659) ENSCSAG00000010700 TENT5D (ENSCSAG00000000078) TBX22 (ENSCSAG00000010713) ITM2A (ENSCSAG00000010721) GPR174 (ENSCSAG00000000080) ENSCSAG00000000082 P2RY10 (ENSCSAG00000000084) LPAR4 (ENSCSAG00000000086) CYSLTR1 (ENSCSAG00000000088) TAF9B (ENSCSAG00000010740) ENSCSAG00000010747 Cercopithecinae ANCESTRAL SPECIES ENSGT00730000111078.n #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00730000111078.n #22 Macaca ANCESTRAL SPECIES ENSGT00730000111078.n #22 Macaca_a ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00390000004404 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.a.b.a.a.a.a ENSGT00940000159289 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.a.a.b ENSGT00730000111078.n #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00390000016438.l ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT01100000263493.a.a.b.b.b.d.a.a Rhesus DUPLICATION Rhesus MODERN SPECIES SLC44A5 (ENSMMUG00000017907) LHX8 (ENSMMUG00000005287) TYW3 (ENSMMUG00000014595) CRYZ (ENSMMUG00000019493) FPGT (ENSMMUG00000019488) LRRC53 (ENSMMUG00000042455) LRRIQ3 (ENSMMUG00000012465) ENSMMUG00000061900 ENSMMUG00000062335 ENSMMUG00000059469 ENSMMUG00000065181 ENSMMUG00000052364 NEGR1 (ENSMMUG00000017314) ENSMMUG00000059833 ENSMMUG00000049603 ZRANB2 (ENSMMUG00000017312) #22 PTGER3 (ENSMMUG00000017309) #23 CTH (ENSMMUG00000019326) #25 ANKRD13C (ENSMMUG00000013853) SRSF11 (ENSMMUG00000013852) LRRC40 (ENSMMUG00000021921) ENSMMUG00000063902 LRRC7 (ENSMMUG00000021917) ENSMMUG00000007527 DEPDC1 (ENSMMUG00000017766) RPE65 (ENSMMUG00000002752) WLS (ENSMMUG00000022908) DIRAS3 (ENSMMUG00000013333) GNG12 (ENSMMUG00000014807) GADD45A (ENSMMUG00000056103) SERBP1 (ENSMMUG00000000652) Rhesus MODERN SPECIES 15 BTC (ENSMMUG00000055714) AREG (ENSMMUG00000002314) EREG (ENSMMUG00000058506) EPGN (ENSMMUG00000002312) MTHFD2L (ENSMMUG00000015554) CXCL3 (ENSMMUG00000051444) CXCL5 (ENSMMUG00000045102) PPBP (ENSMMUG00000042371) PF4 (ENSMMUG00000058452) ENSMMUG00000064819 CXCL1 (ENSMMUG00000008367) PF4V1 (ENSMMUG00000001295) CXCL6 (ENSMMUG00000062421) CXCL8 (ENSMMUG00000060156) RASSF6 (ENSMMUG00000003833) ENSMMUG00000043952 #22 ENSMMUG00000053607 AFM (ENSMMUG00000003831) AFP (ENSMMUG00000003830) ALB (ENSMMUG00000003827) ANKRD17 (ENSMMUG00000000790) COX18 (ENSMMUG00000000789) ADAMTS3 (ENSMMUG00000017977) ENSMMUG00000055625 NPFFR2 (ENSMMUG00000018536) GC (ENSMMUG00000023241) SLC4A4 (ENSMMUG00000016029) DCK (ENSMMUG00000030280) GRSF1 (ENSMMUG00000000380) RUFY3 (ENSMMUG00000004465) ENSMMUG00000049285 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00730000111078.n #22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00730000111078.n #22 Drill MODERN SPECIES 281 ENSMLEG00000027997 #22 ENSMLEG00000027532 Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00640000091578.m.a ENSGT00950000182976.b.a.l.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00910000147273 Gibbon MODERN SPECIES 2 MSH4 (ENSNLEG00000009618) RABGGTB (ENSNLEG00000009609) ACADM (ENSNLEG00000009583) ENSNLEG00000029815 ENSNLEG00000035660 SLC44A5 (ENSNLEG00000009577) LHX8 (ENSNLEG00000009567) TYW3 (ENSNLEG00000009556) CRYZ (ENSNLEG00000009543) ERICH3 (ENSNLEG00000009534) TNNI3K (ENSNLEG00000009478) LRRC53 (ENSNLEG00000009530) FPGT (ENSNLEG00000034002) LRRIQ3 (ENSNLEG00000009474) NEGR1 (ENSNLEG00000009467) ZRANB2 (ENSNLEG00000009455) #22 PTGER3 (ENSNLEG00000027100) #23 ENSNLEG00000036270 #24 CTH (ENSNLEG00000009419) #25 ENSNLEG00000027424 ANKRD13C (ENSNLEG00000033393) SRSF11 (ENSNLEG00000009400) LRRC40 (ENSNLEG00000009378) LRRC7 (ENSNLEG00000009348) ENSNLEG00000029046 ENSNLEG00000029967 DEPDC1 (ENSNLEG00000009334) RPE65 (ENSNLEG00000009313) ENSNLEG00000034379 WLS (ENSNLEG00000009266) DIRAS3 (ENSNLEG00000029641) Hominidae ANCESTRAL SPECIES 3 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00640000091578.m.a ENSGT00950000182976.b.a.l.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00910000147273 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00930000151014.h.b ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00940000154174.s.a.b #24 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00640000091578.m.a ENSGT00950000182976.b.a.l.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00910000147273 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00930000151014.h.b ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00640000091578.m.a ENSGT00950000182976.b.a.l.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00910000147273 ENSGT00950000182964.a.a Pan ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00930000151014.h.b ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00640000091578.m.a ENSGT00950000182976.b.a.l.a ENSGT00950000182913.B ENSGT00390000014122.i.a.a ENSGT00940000154430.e.a.a ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b Bonobo MODERN SPECIES ASB17 (ENSPPAG00000039777) MSH4 (ENSPPAG00000036948) RABGGTB (ENSPPAG00000033708) ENSPPAG00000002504 ACADM (ENSPPAG00000036005) ENSPPAG00000027778 SLC44A5 (ENSPPAG00000029429) LHX8 (ENSPPAG00000036431) TYW3 (ENSPPAG00000043438) CRYZ (ENSPPAG00000042710) ERICH3 (ENSPPAG00000032285) LRRC53 (ENSPPAG00000031788) TNNI3K (ENSPPAG00000038571) LRRIQ3 (ENSPPAG00000037287) NEGR1 (ENSPPAG00000042748) ZRANB2 (ENSPPAG00000037049) #22 PTGER3 (ENSPPAG00000043015) #23 CTH (ENSPPAG00000030218) #25 ENSPPAG00000013130 ANKRD13C (ENSPPAG00000034786) SRSF11 (ENSPPAG00000036149) LRRC40 (ENSPPAG00000034906) ENSPPAG00000027412 LRRC7 (ENSPPAG00000043123) DEPDC1 (ENSPPAG00000037667) RPE65 (ENSPPAG00000042629) ENSPPAG00000033442 ENSPPAG00000032814 WLS (ENSPPAG00000033112) DIRAS3 (ENSPPAG00000024921) GNG12 (ENSPPAG00000036419) Chimpanzee MODERN SPECIES ASB17 (ENSPTRG00000000874) MSH4 (ENSPTRG00000000873) RABGGTB (ENSPTRG00000032439) ENSPTRG00000040641 ACADM (ENSPTRG00000000871) SLC44A5 (ENSPTRG00000000869) LHX8 (ENSPTRG00000000868) TYW3 (ENSPTRG00000000867) CRYZ (ENSPTRG00000000865) ERICH3 (ENSPTRG00000000863) LRRC53 (ENSPTRG00000000862) TNNI3K (ENSPTRG00000000861) FPGT (ENSPTRG00000040236) LRRIQ3 (ENSPTRG00000022606) NEGR1 (ENSPTRG00000000857) ZRANB2 (ENSPTRG00000000856) #22 PTGER3 (ENSPTRG00000000855) #23 CTH (ENSPTRG00000000854) #25 ENSPTRG00000024173 ANKRD13C (ENSPTRG00000000853) SRSF11 (ENSPTRG00000000852) LRRC40 (ENSPTRG00000000850) ENSPTRG00000049950 LRRC7 (ENSPTRG00000000848) DEPDC1 (ENSPTRG00000000847) RPE65 (ENSPTRG00000000846) ENSPTRG00000048041 ENSPTRG00000050855 WLS (ENSPTRG00000000845) DIRAS3 (ENSPTRG00000046970) GNG12 (ENSPTRG00000048598) Human MODERN SPECIES ASB17 (ENSG00000154007) MSH4 (ENSG00000057468) RABGGTB (ENSG00000137955) ACADM (ENSG00000117054) SLC44A5 (ENSG00000137968) LHX8 (ENSG00000162624) TYW3 (ENSG00000162623) CRYZ (ENSG00000116791) ERICH3 (ENSG00000178965) LRRC53 (ENSG00000162621) TNNI3K (ENSG00000116783) FPGT (ENSG00000254685) FPGT-TNNI3K (ENSG00000259030) LRRIQ3 (ENSG00000162620) NEGR1 (ENSG00000172260) ZRANB2 (ENSG00000132485) #22 PTGER3 (ENSG00000050628) #23 CTH (ENSG00000116761) #25 ANKRD13C (ENSG00000118454) SRSF11 (ENSG00000116754) LRRC40 (ENSG00000066557) LRRC7 (ENSG00000033122) DEPDC1 (ENSG00000024526) RPE65 (ENSG00000116745) WLS (ENSG00000116729) DIRAS3 (ENSG00000162595) GNG12 (ENSG00000172380) GADD45A (ENSG00000116717) SERBP1 (ENSG00000142864) IL12RB2 (ENSG00000081985) IL23R (ENSG00000162594) Gorilla MODERN SPECIES MSH4 (ENSGGOG00000044071) RABGGTB (ENSGGOG00000004675) ENSGGOG00000024667 ACADM (ENSGGOG00000024342) ENSGGOG00000038599 SLC44A5 (ENSGGOG00000007029) LHX8 (ENSGGOG00000026204) TYW3 (ENSGGOG00000013676) CRYZ (ENSGGOG00000034854) ERICH3 (ENSGGOG00000010123) LRRC53 (ENSGGOG00000011434) TNNI3K (ENSGGOG00000016503) FPGT (ENSGGOG00000036582) LRRIQ3 (ENSGGOG00000025460) NEGR1 (ENSGGOG00000007438) ZRANB2 (ENSGGOG00000023501) #22 PTGER3 (ENSGGOG00000000587) #23 ENSGGOG00000017176 #24 CTH (ENSGGOG00000016539) #25 ENSGGOG00000043475 ANKRD13C (ENSGGOG00000016397) SRSF11 (ENSGGOG00000005774) LRRC40 (ENSGGOG00000000470) ENSGGOG00000026287 LRRC7 (ENSGGOG00000015111) DEPDC1 (ENSGGOG00000016316) RPE65 (ENSGGOG00000009677) ENSGGOG00000039762 WLS (ENSGGOG00000015460) DIRAS3 (ENSGGOG00000043773) GNG12 (ENSGGOG00000042148) Orangutan MODERN SPECIES ST6GALNAC3 (ENSPPYG00000030574) ASB17 (ENSPPYG00000001228) MSH4 (ENSPPYG00000032071) RABGGTB (ENSPPYG00000001230) ACADM (ENSPPYG00000001231) ENSPPYG00000033221 SLC44A5 (ENSPPYG00000001232) LHX8 (ENSPPYG00000001233) TYW3 (ENSPPYG00000001234) CRYZ (ENSPPYG00000001235) ERICH3 (ENSPPYG00000001236) FPGT (ENSPPYG00000001237) LRRC53 (ENSPPYG00000001238) LRRIQ3 (ENSPPYG00000039895) NEGR1 (ENSPPYG00000001239) ZRANB2 (ENSPPYG00000001240) #22 PTGER3 (ENSPPYG00000001241) #23 ENSPPYG00000037732 ##24 CTH (ENSPPYG00000001242) #25 ENSPPYG00000001243 ANKRD13C (ENSPPYG00000001244) SRSF11 (ENSPPYG00000001245) LRRC40 (ENSPPYG00000001246) LRRC7 (ENSPPYG00000001247) DEPDC1 (ENSPPYG00000001248) RPE65 (ENSPPYG00000001249) WLS (ENSPPYG00000001251) DIRAS3 (ENSPPYG00000001252) GADD45A (ENSPPYG00000001254) ENSPPYG00000001256 IL12RB2 (ENSPPYG00000001257) Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.o.a #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.r ENSGT00910000148470 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00940000155162.c.a.b ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00910000147273 ENSGT00950000182964.a.a Cebidae ANCESTRAL SPECIES 1 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.o.a #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.r ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00940000155162.c.a.b ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00910000147273 ENSGT00950000182964.a.a ENSGT00520000055591.a Cebidae_a ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00510000047602.p ENSGT00940000159289 ENSGT00730000111078.o.a #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00410000028138 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.r ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a.l ENSGT00950000182913.B ENSGT00940000155162.c.a.b ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00910000147273 ENSGT00950000182964.a.a ENSGT00520000055591.a.q Bolivian squirrel monkey MODERN SPECIES 45 RABGGTB (ENSSBOG00000030418) ACADM (ENSSBOG00000032362) SLC44A5 (ENSSBOG00000025792) LHX8 (ENSSBOG00000031302) TYW3 (ENSSBOG00000022917) CRYZ (ENSSBOG00000027623) ERICH3 (ENSSBOG00000030083) TNNI3K (ENSSBOG00000027342) LRRC53 (ENSSBOG00000031388) FPGT (ENSSBOG00000031862) LRRIQ3 (ENSSBOG00000023453) ENSSBOG00000022738 NEGR1 (ENSSBOG00000033521) ENSSBOG00000022428 ENSSBOG00000036028 ENSSBOG00000013268 #22 PTGER3 (ENSSBOG00000032109) #23 CTH (ENSSBOG00000004834) #25 ENSSBOG00000033163 ANKRD13C (ENSSBOG00000035265) SRSF11 (ENSSBOG00000033461) LRRC40 (ENSSBOG00000033042) LRRC7 (ENSSBOG00000023202) ENSSBOG00000024654 DEPDC1 (ENSSBOG00000032526) RPE65 (ENSSBOG00000020711) ENSSBOG00000017047 WLS (ENSSBOG00000029071) GNG12 (ENSSBOG00000023413) GADD45A (ENSSBOG00000026960) SERBP1 (ENSSBOG00000034290) Capuchin MODERN SPECIES 3 MSH4 (ENSCCAG00000034788) ENSCCAG00000034880 ACADM (ENSCCAG00000036285) SLC44A5 (ENSCCAG00000023488) LHX8 (ENSCCAG00000032248) TYW3 (ENSCCAG00000034210) CRYZ (ENSCCAG00000030723) ERICH3 (ENSCCAG00000032735) TNNI3K (ENSCCAG00000021941) LRRC53 (ENSCCAG00000036749) FPGT (ENSCCAG00000029367) LRRIQ3 (ENSCCAG00000036377) ENSCCAG00000031541 ENSCCAG00000024803 NEGR1 (ENSCCAG00000029062) ZRANB2 (ENSCCAG00000034005) #22 PTGER3 (ENSCCAG00000025505) #23 CTH (ENSCCAG00000030316) #25 ENSCCAG00000020484 ENSCCAG00000027424 ANKRD13C (ENSCCAG00000025154) ENSCCAG00000036133 LRRC40 (ENSCCAG00000028127) LRRC7 (ENSCCAG00000001437) ENSCCAG00000029910 ENSCCAG00000022447 DEPDC1 (ENSCCAG00000037389) RPE65 (ENSCCAG00000028501) ENSCCAG00000035780 WLS (ENSCCAG00000031004) GNG12 (ENSCCAG00000035811) Mas night monkey MODERN SPECIES 1222 MSH4 (ENSANAG00000038529) RABGGTB (ENSANAG00000025027) ACADM (ENSANAG00000035420) SLC44A5 (ENSANAG00000020348) LHX8 (ENSANAG00000036963) TYW3 (ENSANAG00000034485) ENSANAG00000028727 ERICH3 (ENSANAG00000026900) LRRC53 (ENSANAG00000032009) TNNI3K (ENSANAG00000017219) FPGT (ENSANAG00000036956) LRRIQ3 (ENSANAG00000030577) ENSANAG00000011332 ENSANAG00000028848 NEGR1 (ENSANAG00000022598) ZRANB2 (ENSANAG00000018241) #22 PTGER3 (ENSANAG00000038521) #23 CTH (ENSANAG00000038461) #25 ENSANAG00000035214 ENSANAG00000030751 ENSANAG00000034053 ENSANAG00000018690 LRRC40 (ENSANAG00000028455) LRRC7 (ENSANAG00000025151) DEPDC1 (ENSANAG00000029940) RPE65 (ENSANAG00000038489) ENSANAG00000037963 WLS (ENSANAG00000035453) GNG12 (ENSANAG00000036464) ENSANAG00000033493 GADD45A (ENSANAG00000024828) Platyrrhini ANCESTRAL SPECIES ENSGT00730000111078.o.b #22 Cebidae ANCESTRAL SPECIES ENSGT00730000111078.o.b #22 Cebidae_a ANCESTRAL SPECIES ENSGT00730000111078.o.b #22 Bolivian squirrel monkey MODERN SPECIES 46 UBE2E3 (ENSSBOG00000032070) ENSSBOG00000019739 ITGA4 (ENSSBOG00000000272) CERKL (ENSSBOG00000021307) NEUROD1 (ENSSBOG00000015587) ITPRID2 (ENSSBOG00000013272) PPP1R1C (ENSSBOG00000032708) ENSSBOG00000030558 PDE1A (ENSSBOG00000034194) ENSSBOG00000035539 DNAJC10 (ENSSBOG00000020962) FRZB (ENSSBOG00000023256) NCKAP1 (ENSSBOG00000031170) DUSP19 (ENSSBOG00000029076) NUP35 (ENSSBOG00000018676) ENSSBOG00000026419 #22 ZNF804A (ENSSBOG00000025383) TMLHE (ENSSBOG00000033577) SPRY3 (ENSSBOG00000011067) ENSSBOG00000026268 IL9R (ENSSBOG00000029398) ENSSBOG00000023734 ENSSBOG00000031371 ENSSBOG00000022772 Platyrrhini ANCESTRAL SPECIES ENSGT00730000111078.p #22 Cebidae ANCESTRAL SPECIES ENSGT00730000111078.p #22 Marmoset MODERN SPECIES 19 ACADM (ENSCJAG00000006692) SLC44A5 (ENSCJAG00000006591) LHX8 (ENSCJAG00000006569) ENSCJAG00000075511 TYW3 (ENSCJAG00000006550) ENSCJAG00000006521 ERICH3 (ENSCJAG00000006491) LRRC53 (ENSCJAG00000006486) TNNI3K (ENSCJAG00000006412) FPGT (ENSCJAG00000047253) LRRIQ3 (ENSCJAG00000031619) ENSCJAG00000078139 ENSCJAG00000055556 ENSCJAG00000071613 NEGR1 (ENSCJAG00000006382) ZRANB2 (ENSCJAG00000006356) #22 ENSCJAG00000087297 PTGER3 (ENSCJAG00000022946) #23 ENSCJAG00000078639 ENSCJAG00000071007 CTH (ENSCJAG00000017808) #25 ENSCJAG00000045097 ANKRD13C (ENSCJAG00000017783) SRSF11 (ENSCJAG00000017704) LRRC40 (ENSCJAG00000017669) ENSCJAG00000071796 ENSCJAG00000043397 LRRC7 (ENSCJAG00000017648) ENSCJAG00000083418 ENSCJAG00000084344 DEPDC1 (ENSCJAG00000017579) Tarsier MODERN SPECIES 3130 ZRANB2 (ENSTSYG00000008830) #22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a.l.a ENSGT00940000159829 ENSGT00530000064198 Bushbaby MODERN SPECIES 125 ST6GALNAC3 (ENSOGAG00000015290) ASB17 (ENSOGAG00000031415) MSH4 (ENSOGAG00000007669) RABGGTB (ENSOGAG00000007665) ACADM (ENSOGAG00000007657) SLC44A5 (ENSOGAG00000001251) LHX8 (ENSOGAG00000030114) ENSOGAG00000011590 ENSOGAG00000011586 ERICH3 (ENSOGAG00000011583) ENSOGAG00000032838 TNNI3K (ENSOGAG00000011573) FPGT (ENSOGAG00000026360) LRRIQ3 (ENSOGAG00000024471) NEGR1 (ENSOGAG00000005858) ZRANB2 (ENSOGAG00000000485) #22 PTGER3 (ENSOGAG00000025169) #23 ENSOGAG00000031530 ANKRD13C (ENSOGAG00000027080) SRSF11 (ENSOGAG00000003392) LRRC40 (ENSOGAG00000003387) ENSOGAG00000003378 ENSOGAG00000034352 ENSOGAG00000029567 DEPDC1 (ENSOGAG00000000934) RPE65 (ENSOGAG00000000937) WLS (ENSOGAG00000003735) DIRAS3 (ENSOGAG00000003734) GNG12 (ENSOGAG00000004629) GADD45A (ENSOGAG00000032078) SERBP1 (ENSOGAG00000025884) Lemuriformes ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312.ab #25 ENSGT00390000000312.`b #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a.l.a ENSGT00940000159829 Mouse lemur MODERN SPECIES 11 ANGPTL3 (ENSMICG00000001535) DOCK7 (ENSMICG00000001507) ATG4C (ENSMICG00000001538) FOXD3 (ENSMICG00000044158) ALG6 (ENSMICG00000000388) ENSMICG00000046047 ENSMICG00000042686 EFCAB7 (ENSMICG00000013626) ENSMICG00000037361 ERICH3 (ENSMICG00000038155) LRRC53 (ENSMICG00000044386) TNNI3K (ENSMICG00000015807) FPGT (ENSMICG00000047410) NEGR1 (ENSMICG00000046222) ENSMICG00000033235 ZRANB2 (ENSMICG00000033818) #22 ENSMICG00000047975 PTGER3 (ENSMICG00000011907) #23 ENSMICG00000043640 ENSMICG00000037474 ENSMICG00000045385 #25 ENSMICG00000016361 #25 ANKRD13C (ENSMICG00000016341) SRSF11 (ENSMICG00000005537) LRRC40 (ENSMICG00000046390) LRRC7 (ENSMICG00000005504) DEPDC1 (ENSMICG00000002794) RPE65 (ENSMICG00000002782) WLS (ENSMICG00000010218) ENSMICG00000026786 GNG12 (ENSMICG00000045755) Lemuriformes_a ANCESTRAL SPECIES 312 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 Greater bamboo lemur MODERN SPECIES 450 CDRT4 (ENSPSMG00000005370) TEKT3 (ENSPSMG00000005380) PMP22 (ENSPSMG00000005393) ENSPSMG00000005402 NEGR1 (ENSPSMG00000005413) ZRANB2 (ENSPSMG00000005440) #22 PTGER3 (ENSPSMG00000005484) #23 Coquerels sifaka MODERN SPECIES 173 NEGR1 (ENSPCOG00000014339) ZRANB2 (ENSPCOG00000019133) #22 PTGER3 (ENSPCOG00000017140) #23 ENSPCOG00000015566 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Tree shrew MODERN SPECIES 1443 ZRANB2 (ENSTBEG00000002316) #22 Glires ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Lagomorpha ANCESTRAL SPECIES 8 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00900000141068.t ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Rabbit MODERN SPECIES 4 MSH4 (ENSOCUG00000016238) RABGGTB (ENSOCUG00000016230) ACADM (ENSOCUG00000013662) SLC44A5 (ENSOCUG00000005562) LHX8 (ENSOCUG00000003641) ENSOCUG00000024263 TYW3 (ENSOCUG00000003043) CRYZ (ENSOCUG00000003038) ERICH3 (ENSOCUG00000003017) TNNI3K (ENSOCUG00000003001) ENSOCUG00000003011 LRRIQ3 (ENSOCUG00000027876) ENSOCUG00000024057 ENSOCUG00000031440 NEGR1 (ENSOCUG00000008285) ZRANB2 (ENSOCUG00000004640) #22 PTGER3 (ENSOCUG00000004633) #23 ENSOCUG00000027801 CTH (ENSOCUG00000007526) #25 ANKRD13C (ENSOCUG00000002007) ENSOCUG00000002001 LRRC40 (ENSOCUG00000001994) ENSOCUG00000001980 ENSOCUG00000029470 ENSOCUG00000013658 RPE65 (ENSOCUG00000013644) WLS (ENSOCUG00000000532) ENSOCUG00000024881 GNG12 (ENSOCUG00000024324) GADD45A (ENSOCUG00000008954) SERBP1 (ENSOCUG00000008946) Pika MODERN SPECIES 1034 ZRANB2 (ENSOPRG00000003839) #22 PTGER3 (ENSOPRG00000003808) #23 Rodentia ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Rodentia_B ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Myomorpha ANCESTRAL SPECIES 12 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Muroidea ANCESTRAL SPECIES 6 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Cricetidae ANCESTRAL SPECIES 6 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Cricetinae ANCESTRAL SPECIES 12 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 219 St6galnac3 (ENSCGRG00001021202) Asb17 (ENSCGRG00001019617) Msh4 (ENSCGRG00001016582) Rabggtb (ENSCGRG00001015396) Acadm (ENSCGRG00001014947) ENSCGRG00001011523 Lhx8 (ENSCGRG00001023560) Tyw3 (ENSCGRG00001022820) Cryz (ENSCGRG00001022359) ENSCGRG00001021548 Tnni3k (ENSCGRG00001019929) Fpgt (ENSCGRG00001018999) ENSCGRG00001018112 ENSCGRG00001009246 Negr1 (ENSCGRG00001006889) ENSCGRG00001019737 #22 Ptger3 (ENSCGRG00001018046) #23 Cth (ENSCGRG00001017639) #25 Ankrd13c (ENSCGRG00001014243) Srsf11 (ENSCGRG00001012043) Lrrc40 (ENSCGRG00001008246) Lrrc7 (ENSCGRG00001014135) ENSCGRG00001016303 Depdc1a (ENSCGRG00001021261) Rpe65 (ENSCGRG00001003298) Wls (ENSCGRG00001000949) Chinese hamster chok1gshd MODERN SPECIES 76 Cfap299 (ENSCGRG00001005694) ENSCGRG00001002838 Bmp3 (ENSCGRG00001013590) Prkg2 (ENSCGRG00001021769) Rasgef1b (ENSCGRG00001019748) ENSCGRG00001021743 Vamp9 (ENSCGRG00001023846) Hnrnpd (ENSCGRG00001014634) Hnrnpdl (ENSCGRG00001010960) ENOPH1 (ENSCGRG00001018064) Tmem150c (ENSCGRG00001009643) Sec31a (ENSCGRG00001006894) Lin54 (ENSCGRG00001018316) Cops4 (ENSCGRG00001000211) Plac8 (ENSCGRG00001015032) ENSCGRG00001016525 #22 Coq2 (ENSCGRG00001019305) Hpse (ENSCGRG00001015338) Helq (ENSCGRG00001024451) Mrps18c (ENSCGRG00001000103) Abraxas1 (ENSCGRG00001009765) Gpat3 (ENSCGRG00001017757) ENSCGRG00001010629 Nkx6-1 (ENSCGRG00001015708) Cds1 (ENSCGRG00001009233) Wdfy3 (ENSCGRG00001020063) Arhgap24 (ENSCGRG00001022938) Mapk10 (ENSCGRG00001014731) ENSCGRG00001000121 ENSCGRG00001000851 Ptpn13 (ENSCGRG00001022752) Golden Hamster MODERN SPECIES 766 Msh4 (ENSMAUG00000007853) Acadm (ENSMAUG00000000918) Slc44a5 (ENSMAUG00000001103) Lhx8 (ENSMAUG00000000103) Tyw3 (ENSMAUG00000000522) Cryz (ENSMAUG00000017771) ENSMAUG00000000118 Tnni3k (ENSMAUG00000016187) Fpgt (ENSMAUG00000014513) ENSMAUG00000014053 ENSMAUG00000012828 Negr1 (ENSMAUG00000011980) Zranb2 (ENSMAUG00000010817) #22 Ptger3 (ENSMAUG00000011005) #23 Cth (ENSMAUG00000009588) #25 Ankrd13c (ENSMAUG00000008204) Srsf11 (ENSMAUG00000008832) Lrrc40 (ENSMAUG00000008654) ENSMAUG00000007836 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Northern American deer mouse MODERN SPECIES 19 Asb17 (ENSPEMG00000024794) Msh4 (ENSPEMG00000000153) Rabggtb (ENSPEMG00000014644) Acadm (ENSPEMG00000009616) Slc44a5 (ENSPEMG00000018249) Lhx8 (ENSPEMG00000015170) Tyw3 (ENSPEMG00000013100) Cryz (ENSPEMG00000010626) ENSPEMG00000000155 Tnni3k (ENSPEMG00000012106) ENSPEMG00000026430 Fpgt (ENSPEMG00000002295) Lrriq3 (ENSPEMG00000000036) ENSPEMG00000029921 Negr1 (ENSPEMG00000017597) Zranb2 (ENSPEMG00000010764) #22 Ptger3 (ENSPEMG00000009210) #23 Cth (ENSPEMG00000000127) #25 Ankrd13c (ENSPEMG00000016958) Srsf11 (ENSPEMG00000014288) Lrrc40 (ENSPEMG00000012486) Lrrc7 (ENSPEMG00000012631) ENSPEMG00000006545 ENSPEMG00000000390 Prairie vole MODERN SPECIES 8 ENSMOCG00000007109 St6galnac3 (ENSMOCG00000002487) Asb17 (ENSMOCG00000018775) Msh4 (ENSMOCG00000012800) Rabggtb (ENSMOCG00000011248) Acadm (ENSMOCG00000016809) Slc44a5 (ENSMOCG00000020401) Lhx8 (ENSMOCG00000011686) Tyw3 (ENSMOCG00000021348) ENSMOCG00000020983 ENSMOCG00000011917 Tnni3k (ENSMOCG00000022213) Fpgt (ENSMOCG00000017616) ENSMOCG00000013522 Negr1 (ENSMOCG00000016825) Zranb2 (ENSMOCG00000018818) #22 Ptger3 (ENSMOCG00000008513) #23 ENSMOCG00000006415 ENSMOCG00000021537 Cth (ENSMOCG00000016949) #25 ENSMOCG00000002252 Ankrd13c (ENSMOCG00000022501) Srsf11 (ENSMOCG00000011388) Lrrc40 (ENSMOCG00000021998) Lrrc7 (ENSMOCG00000017587) Depdc1a (ENSMOCG00000021306) Rpe65 (ENSMOCG00000004259) Wls (ENSMOCG00000008906) ENSMOCG00000009024 ENSMOCG00000014236 Prkacb (ENSMOCG00000001336) Murinae ANCESTRAL SPECIES 5 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000166371 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Mus ANCESTRAL SPECIES 7 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 Mouse MODERN SPECIES 12 St6galnac5 (ENSMUSG00000039037) St6galnac3 (ENSMUSG00000052544) Asb17 (ENSMUSG00000038997) Msh4 (ENSMUSG00000005493) Rabggtb (ENSMUSG00000038975) Acadm (ENSMUSG00000062908) Slc44a5 (ENSMUSG00000028360) Lhx8 (ENSMUSG00000096225) Tyw3 (ENSMUSG00000047583) Cryz (ENSMUSG00000028199) Erich3 (ENSMUSG00000078161) Tnni3k (ENSMUSG00000040086) Fpgt (ENSMUSG00000053870) Lrriq3 (ENSMUSG00000028182) Negr1 (ENSMUSG00000040037) Zranb2 (ENSMUSG00000028180) #22 Ptger3 (ENSMUSG00000040016) #23 Cth (ENSMUSG00000028179) #25 Ankrd13c (ENSMUSG00000039988) Srsf11 (ENSMUSG00000055436) Lrrc40 (ENSMUSG00000063052) Lrrc7 (ENSMUSG00000028176) Depdc1a (ENSMUSG00000028175) Rpe65 (ENSMUSG00000028174) Wls (ENSMUSG00000028173) Mus_C ANCESTRAL SPECIES 6 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B Steppe mouse MODERN SPECIES 3407 ENSMSIG00000006438 Negr1 (ENSMSIG00000006272) Zranb2 (ENSMSIG00000006007) #22 Ptger3 (ENSMSIG00000005959) #23 Cth (ENSMSIG00000005934) #25 Ankrd13c (ENSMSIG00000005781) Srsf11 (ENSMSIG00000005693) Lrrc40 (ENSMSIG00000005638) Lrrc7 (ENSMSIG00000005020) spretus MODERN SPECIES 12 St6galnac5 (MGP_SPRETEiJ_G0026700) St6galnac3 (MGP_SPRETEiJ_G0026701) Asb17 (MGP_SPRETEiJ_G0026702) Msh4 (MGP_SPRETEiJ_G0026703) Rabggtb (MGP_SPRETEiJ_G0026704) MGP_SPRETEiJ_G0026705 Slc44a5 (MGP_SPRETEiJ_G0026706) Lhx8 (MGP_SPRETEiJ_G0026707) Tyw3 (MGP_SPRETEiJ_G0026708) Cryz (MGP_SPRETEiJ_G0026709) Erich3 (MGP_SPRETEiJ_G0026710) Tnni3k (MGP_SPRETEiJ_G0026711) Fpgt (MGP_SPRETEiJ_G0026712) Lrriq3 (MGP_SPRETEiJ_G0026713) Negr1 (MGP_SPRETEiJ_G0026714) Zranb2 (MGP_SPRETEiJ_G0026715) #22 Ptger3 (MGP_SPRETEiJ_G0026716) #23 Cth (MGP_SPRETEiJ_G0026717) #25 Ankrd13c (MGP_SPRETEiJ_G0026718) Srsf11 (MGP_SPRETEiJ_G0026719) Lrrc40 (MGP_SPRETEiJ_G0026720) Lrrc7 (MGP_SPRETEiJ_G0026721) Depdc1a (MGP_SPRETEiJ_G0026722) MGP_SPRETEiJ_G0026723 Wls (MGP_SPRETEiJ_G0026724) Ryukyu mouse MODERN SPECIES 12 St6galnac3 (MGP_CAROLIEiJ_G0025748) Asb17 (MGP_CAROLIEiJ_G0025749) Msh4 (MGP_CAROLIEiJ_G0025750) Rabggtb (MGP_CAROLIEiJ_G0025751) Acadm (MGP_CAROLIEiJ_G0025752) Slc44a5 (MGP_CAROLIEiJ_G0025753) Lhx8 (MGP_CAROLIEiJ_G0025754) Tyw3 (MGP_CAROLIEiJ_G0025755) Cryz (MGP_CAROLIEiJ_G0025756) Erich3 (MGP_CAROLIEiJ_G0025757) MGP_CAROLIEiJ_G0025758 Fpgt (MGP_CAROLIEiJ_G0025759) Lrriq3 (MGP_CAROLIEiJ_G0025760) MGP_CAROLIEiJ_G0025761 Negr1 (MGP_CAROLIEiJ_G0025762) Zranb2 (MGP_CAROLIEiJ_G0025763) #22 Ptger3 (MGP_CAROLIEiJ_G0025764) #23 Cth (MGP_CAROLIEiJ_G0025765) #25 Ankrd13c (MGP_CAROLIEiJ_G0025766) Srsf11 (MGP_CAROLIEiJ_G0025767) Lrrc40 (MGP_CAROLIEiJ_G0025768) Lrrc7 (MGP_CAROLIEiJ_G0025769) Depdc1a (MGP_CAROLIEiJ_G0025770) Rpe65 (MGP_CAROLIEiJ_G0025771) Wls (MGP_CAROLIEiJ_G0025772) MGP_CAROLIEiJ_G0025773 Shrew mouse MODERN SPECIES 17 St6galnac5 (MGP_PahariEiJ_G0027198) St6galnac3 (MGP_PahariEiJ_G0027199) Asb17 (MGP_PahariEiJ_G0027200) Msh4 (MGP_PahariEiJ_G0027201) Rabggtb (MGP_PahariEiJ_G0027202) Acadm (MGP_PahariEiJ_G0027203) Slc44a5 (MGP_PahariEiJ_G0027204) Lhx8 (MGP_PahariEiJ_G0027205) Tyw3 (MGP_PahariEiJ_G0027206) Cryz (MGP_PahariEiJ_G0027207) Erich3 (MGP_PahariEiJ_G0027208) Tnni3k (MGP_PahariEiJ_G0027209) Fpgt (MGP_PahariEiJ_G0027210) Lrriq3 (MGP_PahariEiJ_G0027211) Negr1 (MGP_PahariEiJ_G0027212) Zranb2 (MGP_PahariEiJ_G0027213) #22 Ptger3 (MGP_PahariEiJ_G0027214) #23 Cth (MGP_PahariEiJ_G0027215) #25 Ankrd13c (MGP_PahariEiJ_G0027216) Srsf11 (MGP_PahariEiJ_G0027217) Lrrc40 (MGP_PahariEiJ_G0027218) Lrrc7 (MGP_PahariEiJ_G0027219) Depdc1a (MGP_PahariEiJ_G0027220) Rpe65 (MGP_PahariEiJ_G0027221) Wls (MGP_PahariEiJ_G0027222) Rat MODERN SPECIES 11 St6galnac3 (ENSRNOG00000056894) Asb17 (ENSRNOG00000048832) Msh4 (ENSRNOG00000010431) Rabggtb (ENSRNOG00000009992) Acadm (ENSRNOG00000009845) Slc44a5 (ENSRNOG00000042332) Lhx8 (ENSRNOG00000028348) Tyw3 (ENSRNOG00000028328) Cryz (ENSRNOG00000028319) Erich3 (ENSRNOG00000009533) Tnni3k (ENSRNOG00000028225) Lrrc53 (ENSRNOG00000068038) Fpgt (ENSRNOG00000009548) Lrriq3 (ENSRNOG00000009555) Negr1 (ENSRNOG00000021410) Zranb2 (ENSRNOG00000009990) #22 Ptger3 (ENSRNOG00000010325) #23 ENSRNOG00000063023 AABR07048397.1 (ENSRNOG00000038905) AABR07013931.2 (ENSRNOG00000053997) Cth (ENSRNOG00000010658) #25 Ankrd13c (ENSRNOG00000011340) Srsf11 (ENSRNOG00000029592) Lrrc40 (ENSRNOG00000011555) Lrrc7 (ENSRNOG00000011980) Depdc1 (ENSRNOG00000009503) Rpe65 (ENSRNOG00000009582) Wls (ENSRNOG00000036816) Upper Galilee mountains blind mole rat MODERN SPECIES 1312 Zranb2 (ENSNGAG00000021339) #22 Ptger3 (ENSNGAG00000014963) #23 Cth (ENSNGAG00000016024) #25 Ankrd13c (ENSNGAG00000020035) Srsf11 (ENSNGAG00000010637) Lrrc40 (ENSNGAG00000018907) ENSNGAG00000001206 ENSNGAG00000007064 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 205 Negr1 (ENSJJAG00000023353) ENSJJAG00000023535 ENSJJAG00000023929 #22 Ptger3 (ENSJJAG00000024154) #23 ENSJJAG00000012748 #25 ENSJJAG00000016527 #25 Ankrd13c (ENSJJAG00000016909) Srsf11 (ENSJJAG00000017238) Lrrc40 (ENSJJAG00000018176) ENSJJAG00000018985 ENSJJAG00000020945 ENSJJAG00000012643 ENSJJAG00000022639 Depdc1a (ENSJJAG00000000124) Rpe65 (ENSJJAG00000006687) ENSJJAG00000010529 ENSJJAG00000012707 Wls (ENSJJAG00000010758) Lesser Egyptian jerboa MODERN SPECIES 61 Galnt12 (ENSJJAG00000008989) Anks6 (ENSJJAG00000018199) Tbc1d2 (ENSJJAG00000019681) Coro2a (ENSJJAG00000022571) Trim14 (ENSJJAG00000019629) Nans (ENSJJAG00000017140) ENSJJAG00000018447 Trmo (ENSJJAG00000013904) Xpa (ENSJJAG00000021732) Sdc2 (ENSJJAG00000019670) Ptdss1 (ENSJJAG00000020867) ENSJJAG00000022904 ENSJJAG00000011745 Uqcrb (ENSJJAG00000019658) Gdf6 (ENSJJAG00000016433) ENSJJAG00000022813 #22 Ndufaf6 (ENSJJAG00000021214) ENSJJAG00000004025 Trp53inp1 (ENSJJAG00000000693) ENSJJAG00000008698 Ints8 (ENSJJAG00000006447) Dpy19l4 (ENSJJAG00000010845) Esrp1 (ENSJJAG00000002006) Virma (ENSJJAG00000024245) Rad54b (ENSJJAG00000010314) Gem (ENSJJAG00000024345) Cdh17 (ENSJJAG00000011121) Tmem67 (ENSJJAG00000015625) ENSJJAG00000004165 Cibar1 (ENSJJAG00000023978) Triqk (ENSJJAG00000017357) Kangaroo rat MODERN SPECIES 370 ENSDORG00000027114 ENSDORG00000024342 Negr1 (ENSDORG00000007902) Zranb2 (ENSDORG00000016348) #22 Ptger3 (ENSDORG00000016347) #23 Cth (ENSDORG00000009184) #25 Ankrd13c (ENSDORG00000000672) Srsf11 (ENSDORG00000000669) Lrrc40 (ENSDORG00000000667) Lrrc7 (ENSDORG00000000664) Rpe65 (ENSDORG00000004476) Wls (ENSDORG00000007449) Gng12 (ENSDORG00000027722) Gadd45a (ENSDORG00000011668) ENSDORG00000023240 Serbp1 (ENSDORG00000002189) Slc35d1 (ENSDORG00000002120) Mier1 (ENSDORG00000002114) Sgip1 (ENSDORG00000001885) Rodentia_A ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Hystricomorpha ANCESTRAL SPECIES 44 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 ENSGT00390000010146 Hystricomorpha_a ANCESTRAL SPECIES 14 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 ENSGT00390000010146 Guinea pig MODERN SPECIES 2 PIGK (ENSCPOG00000011874) ST6GALNAC5 (ENSCPOG00000011868) ST6GALNAC3 (ENSCPOG00000030630) ASB17 (ENSCPOG00000011485) MSH4 (ENSCPOG00000001103) RABGGTB (ENSCPOG00000000664) ACADM (ENSCPOG00000011134) SLC44A5 (ENSCPOG00000000895) LHX8 (ENSCPOG00000000893) ENSCPOG00000034855 CRYZ (ENSCPOG00000006521) ENSCPOG00000038970 FPGT (ENSCPOG00000006498) ENSCPOG00000012014 NEGR1 (ENSCPOG00000004501) ZRANB2 (ENSCPOG00000007829) #22 PTGER3 (ENSCPOG00000002783) #23 CTH (ENSCPOG00000020205) #25 ANKRD13C (ENSCPOG00000009559) SRSF11 (ENSCPOG00000009554) LRRC40 (ENSCPOG00000009536) LRRC7 (ENSCPOG00000009529) ENSCPOG00000024331 DEPDC1 (ENSCPOG00000013839) RPE65 (ENSCPOG00000013831) WLS (ENSCPOG00000012423) GNG12 (ENSCPOG00000036301) GADD45A (ENSCPOG00000005810) SERBP1 (ENSCPOG00000020069) ENSCPOG00000027017 SLC35D1 (ENSCPOG00000030853) Hystricomorpha_b ANCESTRAL SPECIES 6 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a.cb ENSGT00940000159829 ENSGT00530000064198 ENSGT00390000010146 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 146 LEO1 (ENSODEG00000008095) TMOD3 (ENSODEG00000006720) TMOD2 (ENSODEG00000008645) LYSMD2 (ENSODEG00000007006) SCG3 (ENSODEG00000008588) DMXL2 (ENSODEG00000007956) ENSODEG00000019746 GLDN (ENSODEG00000010063) CYP19A1 (ENSODEG00000007934) TNFAIP8L3 (ENSODEG00000006955) ENSODEG00000007172 SPPL2A (ENSODEG00000007784) TRPM7 (ENSODEG00000008007) USP50 (ENSODEG00000008119) USP8 (ENSODEG00000007032) ENSODEG00000008671 #22 GABPB1 (ENSODEG00000007002) HDC (ENSODEG00000007105) SLC27A2 (ENSODEG00000007224) ATP8B4 (ENSODEG00000010058) DTWD1 (ENSODEG00000008473) FGF7 (ENSODEG00000007753) GALK2 (ENSODEG00000007459) ENSODEG00000007686 SECISBP2L (ENSODEG00000007846) ENSODEG00000007930 ENSODEG00000007307 CEP152 (ENSODEG00000008644) FBN1 (ENSODEG00000007689) ENSODEG00000008550 SLC12A1 (ENSODEG00000009402) Degu MODERN SPECIES 119 ENSODEG00000012736 MDH1 (ENSODEG00000011582) WDPCP (ENSODEG00000011330) ENSODEG00000019821 ENSODEG00000011103 ENSODEG00000011160 OTX1 (ENSODEG00000012071) EHBP1 (ENSODEG00000012259) ENSODEG00000011529 B3GNT2 (ENSODEG00000011165) ENSODEG00000011341 ENSODEG00000011618 ENSODEG00000012263 ENSODEG00000012087 ENSODEG00000011239 ENSODEG00000011466 #22 XPO1 (ENSODEG00000012632) ENSODEG00000020015 USP34 (ENSODEG00000011790) ENSODEG00000011830 ENSODEG00000012067 PUS10 (ENSODEG00000011720) REL (ENSODEG00000013430) PAPOLG (ENSODEG00000012424) ENSODEG00000012174 BCL11A (ENSODEG00000011913) ENSODEG00000012035 ENSODEG00000020019 ENSODEG00000013163 VRK2 (ENSODEG00000013065) ENSODEG00000013497 Degu MODERN SPECIES 98 SLC44A5 (ENSODEG00000005408) LHX8 (ENSODEG00000005902) TYW3 (ENSODEG00000005361) ENSODEG00000006615 ENSODEG00000006432 ENSODEG00000005954 FPGT (ENSODEG00000006370) ENSODEG00000005870 NEGR1 (ENSODEG00000005896) ENSODEG00000006491 #22 PTGER3 (ENSODEG00000005473) #23 CTH (ENSODEG00000006417) #25 ANKRD13C (ENSODEG00000005392) SRSF11 (ENSODEG00000006289) LRRC40 (ENSODEG00000005601) LRRC7 (ENSODEG00000006670) ENSODEG00000005510 DEPDC1 (ENSODEG00000005384) RPE65 (ENSODEG00000005046) WLS (ENSODEG00000006216) GNG12 (ENSODEG00000005519) GADD45A (ENSODEG00000007377) ENSODEG00000005146 ENSODEG00000006835 ENSODEG00000006396 Long-tailed chinchilla MODERN SPECIES 130 ST6GALNAC5 (ENSCLAG00000006546) ST6GALNAC3 (ENSCLAG00000006847) ASB17 (ENSCLAG00000007188) MSH4 (ENSCLAG00000007368) RABGGTB (ENSCLAG00000009298) ACADM (ENSCLAG00000010619) SLC44A5 (ENSCLAG00000010286) LHX8 (ENSCLAG00000004105) TYW3 (ENSCLAG00000004370) CRYZ (ENSCLAG00000004555) ERICH3 (ENSCLAG00000005724) ENSCLAG00000005943 FPGT (ENSCLAG00000005973) LRRIQ3 (ENSCLAG00000006032) NEGR1 (ENSCLAG00000007364) ZRANB2 (ENSCLAG00000004404) #22 PTGER3 (ENSCLAG00000005105) #23 CTH (ENSCLAG00000005393) #25 ANKRD13C (ENSCLAG00000011373) SRSF11 (ENSCLAG00000013309) LRRC40 (ENSCLAG00000014047) LRRC7 (ENSCLAG00000008949) DEPDC1 (ENSCLAG00000006344) RPE65 (ENSCLAG00000006679) WLS (ENSCLAG00000006873) GNG12 (ENSCLAG00000007040) GADD45A (ENSCLAG00000007279) SERBP1 (ENSCLAG00000007459) ENSCLAG00000008496 IL23R (ENSCLAG00000008594) ENSCLAG00000005867 Naked mole-rat female MODERN SPECIES 10 ST6GALNAC3 (ENSHGLG00000004799) ASB17 (ENSHGLG00000004852) MSH4 (ENSHGLG00000005307) ENSHGLG00000005990 ACADM (ENSHGLG00000007755) SLC44A5 (ENSHGLG00000008408) LHX8 (ENSHGLG00000004276) TYW3 (ENSHGLG00000046756) CRYZ (ENSHGLG00000004519) ERICH3 (ENSHGLG00000042655) TNNI3K (ENSHGLG00000006354) ENSHGLG00000041704 FPGT (ENSHGLG00000009086) ENSHGLG00000004255 NEGR1 (ENSHGLG00000004482) ZRANB2 (ENSHGLG00000004819) #22 PTGER3 (ENSHGLG00000005622) #23 CTH (ENSHGLG00000006660) #25 ENSHGLG00000037598 ANKRD13C (ENSHGLG00000007705) SRSF11 (ENSHGLG00000008682) LRRC40 (ENSHGLG00000005148) ENSHGLG00000005980 ENSHGLG00000033465 ENSHGLG00000032766 ENSHGLG00000044082 DEPDC1 (ENSHGLG00000010030) RPE65 (ENSHGLG00000010215) WLS (ENSHGLG00000004340) GNG12 (ENSHGLG00000004433) GADD45A (ENSHGLG00000004470) Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B.z ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Eurasian red squirrel MODERN SPECIES ENSSVLG00005020843 ASB17 (ENSSVLG00005020808) MSH4 (ENSSVLG00005020643) RABGGTB (ENSSVLG00005020498) ACADM (ENSSVLG00005020244) SLC44A5 (ENSSVLG00005019739) LHX8 (ENSSVLG00005019479) TYW3 (ENSSVLG00005019387) CRYZ (ENSSVLG00005019217) ENSSVLG00005019103 LRRC53 (ENSSVLG00005019046) TNNI3K (ENSSVLG00005018407) FPGT (ENSSVLG00005018290) LRRIQ3 (ENSSVLG00005018133) NEGR1 (ENSSVLG00005017955) ZRANB2 (ENSSVLG00005017892) #22 PTGER3 (ENSSVLG00005017732) #23 ENSSVLG00005017682 ENSSVLG00005017661 ENSSVLG00005017607 ENSSVLG00005017591 CTH (ENSSVLG00005017161) #25 ENSSVLG00005017080 ANKRD13C (ENSSVLG00005016963) SRSF11 (ENSSVLG00005016775) ENSSVLG00005016746 ENSSVLG00005016639 LRRC7 (ENSSVLG00005016053) DEPDC1 (ENSSVLG00005015797) RPE65 (ENSSVLG00005015624) WLS (ENSSVLG00005015479) Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B.z.a ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.w.a #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Alpin marmot MODERN SPECIES 27 ST6GALNAC3 (ENSMMMG00000000833) ASB17 (ENSMMMG00000000815) MSH4 (ENSMMMG00000000736) ENSMMMG00000000695 ACADM (ENSMMMG00000000664) ENSMMMG00000000643 LHX8 (ENSMMMG00000000607) TYW3 (ENSMMMG00000000575) CRYZ (ENSMMMG00000000554) ENSMMMG00000000530 ENSMMMG00000000512 TNNI3K (ENSMMMG00000000454) FPGT (ENSMMMG00000000423) ENSMMMG00000000411 NEGR1 (ENSMMMG00000000368) ZRANB2 (ENSMMMG00000000288) #22 PTGER3 (ENSMMMG00000000262) #23 ENSMMMG00000000250 ENSMMMG00000000236 ENSMMMG00000000219 CTH (ENSMMMG00000000175) #25 ANKRD13C (ENSMMMG00000000111) SRSF11 (ENSMMMG00000018369) LRRC40 (ENSMMMG00000018339) LRRC7 (ENSMMMG00000018169) DEPDC1 (ENSMMMG00000018082) RPE65 (ENSMMMG00000018066) WLS (ENSMMMG00000018053) DIRAS3 (ENSMMMG00000018034) GNG12 (ENSMMMG00000018008) GADD45A (ENSMMMG00000017997) Marmotini_b ANCESTRAL SPECIES 105 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B.z.a ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078.w.a #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00940000154222.d.b.d.b.n ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Arctic ground squirrel MODERN SPECIES 14 ST6GALNAC3 (ENSUPAG00010015056) ASB17 (ENSUPAG00010015039) MSH4 (ENSUPAG00010014986) ENSUPAG00010014929 ACADM (ENSUPAG00010014892) SLC44A5 (ENSUPAG00010014841) LHX8 (ENSUPAG00010014818) TYW3 (ENSUPAG00010014776) CRYZ (ENSUPAG00010014757) ENSUPAG00010014725 ENSUPAG00010014716 TNNI3K (ENSUPAG00010014659) FPGT (ENSUPAG00010014645) ENSUPAG00010014638 NEGR1 (ENSUPAG00010014624) ZRANB2 (ENSUPAG00010014577) #22 ENSUPAG00010014568 #23 ENSUPAG00010014565 CTH (ENSUPAG00010014528) #25 ENSUPAG00010014512 ANKRD13C (ENSUPAG00010014475) SRSF11 (ENSUPAG00010014456) LRRC40 (ENSUPAG00010014436) LRRC7 (ENSUPAG00010014242) DEPDC1 (ENSUPAG00010014188) RPE65 (ENSUPAG00010014157) WLS (ENSUPAG00010014142) ENSUPAG00010014133 GNG12 (ENSUPAG00010014121) GADD45A (ENSUPAG00010014109) SERBP1 (ENSUPAG00010013929) Squirrel MODERN SPECIES 191 NEGR1 (ENSSTOG00000010905) ENSSTOG00000000890 #22 PTGER3 (ENSSTOG00000000886) #23 CTH (ENSSTOG00000000202) #25 ENSSTOG00000034931 ENSSTOG00000032029 ANKRD13C (ENSSTOG00000008687) SRSF11 (ENSSTOG00000008675) LRRC40 (ENSSTOG00000008649) LRRC7 (ENSSTOG00000008618) ENSSTOG00000032513 DEPDC1 (ENSSTOG00000001673) RPE65 (ENSSTOG00000001659) WLS (ENSSTOG00000008145) GNG12 (ENSSTOG00000004502) GADD45A (ENSSTOG00000024503) SERBP1 (ENSSTOG00000026587) Marmotini ANCESTRAL SPECIES ENSGT00730000111078.w.b #22 Marmotini_b ANCESTRAL SPECIES ENSGT00730000111078.w.b #22 Squirrel MODERN SPECIES 98 FZD4 (ENSSTOG00000007437) PRSS23 (ENSSTOG00000007434) ME3 (ENSSTOG00000014488) ENSSTOG00000028574 CCDC81 (ENSSTOG00000014479) HIKESHI (ENSSTOG00000004702) EED (ENSSTOG00000004680) PICALM (ENSSTOG00000008689) CCDC83 (ENSSTOG00000008671) SYTL2 (ENSSTOG00000027973) CCDC89 (ENSSTOG00000002976) CREBZF (ENSSTOG00000002975) ENSSTOG00000016101 TMEM126B (ENSSTOG00000002952) DLG2 (ENSSTOG00000002895) ENSSTOG00000024205 #22 CCDC90B (ENSSTOG00000001632) ANKRD42 (ENSSTOG00000001620) PCF11 (ENSSTOG00000005515) RAB30 (ENSSTOG00000020966) DDIAS (ENSSTOG00000004978) PRCP (ENSSTOG00000026707) ENSSTOG00000032215 TENM4 (ENSSTOG00000020637) NARS2 (ENSSTOG00000019758) GAB2 (ENSSTOG00000003173) USP35 (ENSSTOG00000019692) KCTD21 (ENSSTOG00000022775) ALG8 (ENSSTOG00000008108) NDUFC2 (ENSSTOG00000008104) THRSP (ENSSTOG00000023796) Marmotini ANCESTRAL SPECIES ENSGT00730000111078.x #22 Marmotini_b ANCESTRAL SPECIES ENSGT00730000111078.x #22 Arctic ground squirrel MODERN SPECIES 32 PICALM (ENSUPAG00010016850) ENSUPAG00010016936 CCDC83 (ENSUPAG00010016945) ENSUPAG00010016969 CCDC89 (ENSUPAG00010017136) CREBZF (ENSUPAG00010017140) TMEM126A (ENSUPAG00010017144) TMEM126B (ENSUPAG00010017151) DLG2 (ENSUPAG00010017180) ENSUPAG00010017542 #22 CCDC90B (ENSUPAG00010017544) ANKRD42 (ENSUPAG00010017553) PCF11 (ENSUPAG00010017583) RAB30 (ENSUPAG00010017623) DDIAS (ENSUPAG00010017655) PRCP (ENSUPAG00010017665) CTSO (ENSUPAG00010017700) TDO2 (ENSUPAG00010017712) ASIC5 (ENSUPAG00010017723) GUCY1B1 (ENSUPAG00010017741) GUCY1A1 (ENSUPAG00010017764) MAP9 (ENSUPAG00010017777) NPY2R (ENSUPAG00010017823) RBM46 (ENSUPAG00010017834) LRAT (ENSUPAG00010017853) Laurasiatheria ANCESTRAL SPECIES ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000167450 ENSGT00940000175064 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Eulipotyphla ANCESTRAL SPECIES 1906 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 Hedgehog DUPLICATION Hedgehog MODERN SPECIES 3423 ENSEEUG00000007679 #22 Hedgehog MODERN SPECIES 3412 ENSEEUG00000012899 #22 PTGER3 (ENSEEUG00000012887) #23 Common shrew MODERN SPECIES 2601 ZRANB2 (ENSSARG00000009452) #22 PTGER3 (ENSSARG00000009446) #23 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000183128.B ENSGT00940000165774 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000167450 ENSGT00940000175064 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000183128.B ENSGT00940000165774 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000167450 ENSGT00940000175064 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Carnivora ANCESTRAL SPECIES 1 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000165774 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00990000207423 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Caniformia ANCESTRAL SPECIES 2 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000165774 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Canidae ANCESTRAL SPECIES 18 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000168420 ENSGT00940000153304.C ENSGT00940000154882.`b ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000167450 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Canis_lupus ANCESTRAL SPECIES 2 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000168420 ENSGT00940000153304.C ENSGT00940000154882.`b ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000167450 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT01010000228719 ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Dingo MODERN SPECIES 172 ENSCAFG00020016987 ASB17 (ENSCAFG00020016989) MSH4 (ENSCAFG00020017000) ENSCAFG00020017061 ENSCAFG00020017067 ACADM (ENSCAFG00020017070) SLC44A5 (ENSCAFG00020017085) LHX8 (ENSCAFG00020017087) ENSCAFG00020017094 TYW3 (ENSCAFG00020017095) CRYZ (ENSCAFG00020017097) TNNI3K (ENSCAFG00020017106) FPGT (ENSCAFG00020017117) ENSCAFG00020017119 NEGR1 (ENSCAFG00020017144) ZRANB2 (ENSCAFG00020017151) #22 PTGER3 (ENSCAFG00020017158) #23 CTH (ENSCAFG00020017171) #25 ANKRD13C (ENSCAFG00020017183) ENSCAFG00020017253 ENSCAFG00020017255 ENSCAFG00020017259 LRRC40 (ENSCAFG00020017260) LRRC7 (ENSCAFG00020017279) DEPDC1 (ENSCAFG00020017390) RPE65 (ENSCAFG00020017401) WLS (ENSCAFG00020017407) ENSCAFG00020017412 ENSCAFG00020017436 GNG12 (ENSCAFG00020017437) GADD45A (ENSCAFG00020017438) Dog MODERN SPECIES 34 ENSCAFG00845004172 ENSCAFG00845004180 RABGGTB (ENSCAFG00845004191) ACADM (ENSCAFG00845004219) SLC44A5 (ENSCAFG00845004401) LHX8 (ENSCAFG00845004534) ENSCAFG00845004563 TYW3 (ENSCAFG00845004581) CRYZ (ENSCAFG00845004617) ENSCAFG00845004648 TNNI3K (ENSCAFG00845004693) ENSCAFG00845004736 FPGT (ENSCAFG00845004746) LRRIQ3 (ENSCAFG00845004764) NEGR1 (ENSCAFG00845004834) ZRANB2 (ENSCAFG00845004863) #22 PTGER3 (ENSCAFG00845012614) #23 ENSCAFG00845012905 #25 ANKRD13C (ENSCAFG00845012966) SRSF11 (ENSCAFG00845013020) LRRC40 (ENSCAFG00845013116) LRRC7 (ENSCAFG00845013252) DEPDC1 (ENSCAFG00845013585) RPE65 (ENSCAFG00845013646) WLS (ENSCAFG00845013715) ENSCAFG00845014009 GADD45A (ENSCAFG00845014040) Red fox MODERN SPECIES 145 SLC44A5 (ENSVVUG00000006789) LHX8 (ENSVVUG00000006874) ENSVVUG00000006895 TYW3 (ENSVVUG00000006902) ENSVVUG00000006915 TNNI3K (ENSVVUG00000006991) ENSVVUG00000007063 FPGT (ENSVVUG00000007069) LRRIQ3 (ENSVVUG00000007080) NEGR1 (ENSVVUG00000007118) ZRANB2 (ENSVVUG00000007123) #22 ENSVVUG00000007137 PTGER3 (ENSVVUG00000007145) #23 CTH (ENSVVUG00000007214) #25 ANKRD13C (ENSVVUG00000008055) SRSF11 (ENSVVUG00000008361) LRRC40 (ENSVVUG00000008375) LRRC7 (ENSVVUG00000008403) Caniformia_b ANCESTRAL SPECIES 1 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000165774 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00940000154612.m.b.d ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Ursidae ANCESTRAL SPECIES ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000165774 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00940000154612.m.b.d ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.b ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a.mb ENSGT00940000159829 ENSGT00530000064198 ENSGT00390000010146 Giant Panda MODERN SPECIES 11 MSH4 (ENSAMEG00000003606) RABGGTB (ENSAMEG00000003584) ACADM (ENSAMEG00000003560) ENSAMEG00000028212 ENSAMEG00000025637 SLC44A5 (ENSAMEG00000003492) LHX8 (ENSAMEG00000003474) TYW3 (ENSAMEG00000003461) CRYZ (ENSAMEG00000003442) ENSAMEG00000003427 ENSAMEG00000003421 TNNI3K (ENSAMEG00000003381) FPGT (ENSAMEG00000027489) LRRIQ3 (ENSAMEG00000031314) NEGR1 (ENSAMEG00000012764) ZRANB2 (ENSAMEG00000003845) #22 PTGER3 (ENSAMEG00000003871) #23 CTH (ENSAMEG00000000028) #25 ANKRD13C (ENSAMEG00000000027) SRSF11 (ENSAMEG00000024726) LRRC40 (ENSAMEG00000011362) LRRC7 (ENSAMEG00000011407) DEPDC1 (ENSAMEG00000000402) RPE65 (ENSAMEG00000000442) WLS (ENSAMEG00000004493) GNG12 (ENSAMEG00000004527) GADD45A (ENSAMEG00000004529) SERBP1 (ENSAMEG00000004536) IL12RB2 (ENSAMEG00000004570) IL23R (ENSAMEG00000004611) C1orf141 (ENSAMEG00000004616) Ursus ANCESTRAL SPECIES 18 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000165774 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00940000154612.m.b.d ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.b ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a.mb ENSGT00940000159829 ENSGT00530000064198 ENSGT00390000010146 Polar bear MODERN SPECIES 170 RABGGTB (ENSUMAG00000006348) ENSUMAG00000006364 ENSUMAG00000006369 SLC44A5 (ENSUMAG00000006391) LHX8 (ENSUMAG00000006438) ENSUMAG00000006451 TYW3 (ENSUMAG00000006460) CRYZ (ENSUMAG00000006464) ENSUMAG00000006473 TNNI3K (ENSUMAG00000006497) ENSUMAG00000006528 FPGT (ENSUMAG00000006532) ENSUMAG00000006534 NEGR1 (ENSUMAG00000006553) ENSUMAG00000006557 ZRANB2 (ENSUMAG00000006559) #22 PTGER3 (ENSUMAG00000006569) #23 ENSUMAG00000006594 CTH (ENSUMAG00000006601) #25 ANKRD13C (ENSUMAG00000006610) SRSF11 (ENSUMAG00000006618) LRRC40 (ENSUMAG00000006621) LRRC7 (ENSUMAG00000006650) DEPDC1 (ENSUMAG00000006778) RPE65 (ENSUMAG00000006787) WLS (ENSUMAG00000006798) GNG12 (ENSUMAG00000006831) GADD45A (ENSUMAG00000006834) SERBP1 (ENSUMAG00000006841) IL12RB2 (ENSUMAG00000006846) IL23R (ENSUMAG00000006850) American black bear MODERN SPECIES 3521 ZRANB2 (ENSUAMG00000023128) #22 PTGER3 (ENSUAMG00000023130) #23 Mustelinae ANCESTRAL SPECIES 39 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00940000154612.m.b.d ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 American mink MODERN SPECIES 157 RABGGTB (ENSNVIG00000010334) ACADM (ENSNVIG00000010380) SLC44A5 (ENSNVIG00000010403) LHX8 (ENSNVIG00000010449) ENSNVIG00000010470 TYW3 (ENSNVIG00000010472) ENSNVIG00000010500 ENSNVIG00000010591 TNNI3K (ENSNVIG00000010632) ENSNVIG00000010656 FPGT (ENSNVIG00000010670) ENSNVIG00000010690 LRRIQ3 (ENSNVIG00000010715) NEGR1 (ENSNVIG00000010796) ENSNVIG00000010809 ZRANB2 (ENSNVIG00000010818) #22 PTGER3 (ENSNVIG00000010874) #23 CTH (ENSNVIG00000010934) #25 AN13C (ENSNVIG00000011000) SRSF11 (ENSNVIG00000011028) LRC40 (ENSNVIG00000011080) LRRC7 (ENSNVIG00000011100) Ferret MODERN SPECIES 254 NEGR1 (ENSMPUG00000000921) ZRANB2 (ENSMPUG00000000917) #22 PTGER3 (ENSMPUG00000000913) #23 ENSMPUG00000018477 ENSMPUG00000000901 CTH (ENSMPUG00000000898) #25 ANKRD13C (ENSMPUG00000000895) SRSF11 (ENSMPUG00000000892) LRRC40 (ENSMPUG00000000890) LRRC7 (ENSMPUG00000000888) DEPDC1 (ENSMPUG00000000887) RPE65 (ENSMPUG00000000810) WLS (ENSMPUG00000000807) ENSMPUG00000000803 ENSMPUG00000000800 GADD45A (ENSMPUG00000000798) SERBP1 (ENSMPUG00000000797) Felidae ANCESTRAL SPECIES 10 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.cb ENSGT00530000064485 ENSGT00990000207423 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Panthera ANCESTRAL SPECIES 4 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.cb ENSGT00530000064485 ENSGT00990000207423 ENSGT00940000159131 ENSGT00940000161095 ENSGT00940000175064 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000158854.g.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Panthera_a ANCESTRAL SPECIES 11 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.cb ENSGT00530000064485 ENSGT00990000207423 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000158854.g.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 lion MODERN SPECIES 8 MSH4 (ENSPLOG00000008330) RABGGTB (ENSPLOG00000008437) ACADM (ENSPLOG00000008502) SLC44A5 (ENSPLOG00000008597) LHX8 (ENSPLOG00000008855) TYW3 (ENSPLOG00000008998) CRYZ (ENSPLOG00000009084) ENSPLOG00000009232 ENSPLOG00000009288 TNNI3K (ENSPLOG00000009309) LRRC53 (ENSPLOG00000009341) FPGT (ENSPLOG00000009376) LRRIQ3 (ENSPLOG00000009451) ENSPLOG00000009529 NEGR1 (ENSPLOG00000009541) ZRANB2 (ENSPLOG00000009609) #22 PTGER3 (ENSPLOG00000009711) #23 CTH (ENSPLOG00000009821) #25 ANKRD13C (ENSPLOG00000009877) SRSF11 (ENSPLOG00000009962) LRRC40 (ENSPLOG00000010064) LRRC7 (ENSPLOG00000010287) DEPDC1 (ENSPLOG00000010722) RPE65 (ENSPLOG00000010779) WLS (ENSPLOG00000011018) GNG12 (ENSPLOG00000011515) GADD45A (ENSPLOG00000011555) SERBP1 (ENSPLOG00000011662) IL12RB2 (ENSPLOG00000011722) IL23R (ENSPLOG00000011807) C1orf141 (ENSPLOG00000011956) leopard MODERN SPECIES 16 LHX8 (ENSPPRG00000006595) ENSPPRG00000006366 ENSPPRG00000005297 ENSPPRG00000000404 ENSPPRG00000022830 TYW3 (ENSPPRG00000023209) ENSPPRG00000023826 ENSPPRG00000022348 ENSPPRG00000015493 TNNI3K (ENSPPRG00000015003) LRRC53 (ENSPPRG00000014287) FPGT (ENSPPRG00000013879) ENSPPRG00000013198 ENSPPRG00000017420 NEGR1 (ENSPPRG00000010074) ZRANB2 (ENSPPRG00000008962) #22 PTGER3 (ENSPPRG00000007485) #23 CTH (ENSPPRG00000005228) #25 ANKRD13C (ENSPPRG00000003766) SRSF11 (ENSPPRG00000002720) LRRC40 (ENSPPRG00000000254) ENSPPRG00000022341 ENSPPRG00000017380 DEPDC1 (ENSPPRG00000014611) RPE65 (ENSPPRG00000013670) WLS (ENSPPRG00000013013) GNG12 (ENSPPRG00000009675) GADD45A (ENSPPRG00000009546) SERBP1 (ENSPPRG00000008971) IL12RB2 (ENSPPRG00000008198) IL23R (ENSPPRG00000004538) Tiger MODERN SPECIES 311 ENSPTIG00000011312 FPGT (ENSPTIG00000012210) ENSPTIG00000014031 ENSPTIG00000006252 ENSPTIG00000015221 NEGR1 (ENSPTIG00000015387) ZRANB2 (ENSPTIG00000017134) #22 CTH (ENSPTIG00000019906) #25 ANKRD13C (ENSPTIG00000005530) SRSF11 (ENSPTIG00000008536) LRRC40 (ENSPTIG00000010337) ENSPTIG00000011749 ENSPTIG00000012986 DEPDC1 (ENSPTIG00000014898) RPE65 (ENSPTIG00000016708) WLS (ENSPTIG00000017665) GNG12 (ENSPTIG00000000039) GADD45A (ENSPTIG00000002992) SERBP1 (ENSPTIG00000005938) IL12RB2 (ENSPTIG00000007381) IL23R (ENSPTIG00000013297) C1orf141 (ENSPTIG00000014969) Cat MODERN SPECIES 239 MSH4 (ENSFCAG00000039107) RABGGTB (ENSFCAG00000015450) ACADM (ENSFCAG00000026468) SLC44A5 (ENSFCAG00000003245) LHX8 (ENSFCAG00000031609) TYW3 (ENSFCAG00000035340) CRYZ (ENSFCAG00000030626) ERICH3 (ENSFCAG00000031192) LRRC53 (ENSFCAG00000006394) TNNI3K (ENSFCAG00000038109) FPGT (ENSFCAG00000029185) LRRIQ3 (ENSFCAG00000030157) ENSFCAG00000027931 NEGR1 (ENSFCAG00000033201) ENSFCAG00000052553 ZRANB2 (ENSFCAG00000028246) #22 PTGER3 (ENSFCAG00000006185) #23 CTH (ENSFCAG00000012450) #25 ANKRD13C (ENSFCAG00000012449) SRSF11 (ENSFCAG00000012448) LRRC40 (ENSFCAG00000026681) LRRC7 (ENSFCAG00000023714) DEPDC1 (ENSFCAG00000012566) RPE65 (ENSFCAG00000012565) WLS (ENSFCAG00000012564) GNG12 (ENSFCAG00000045903) GADD45A (ENSFCAG00000002987) SERBP1 (ENSFCAG00000000606) IL12RB2 (ENSFCAG00000001940) IL23R (ENSFCAG00000001939) CC1H1orf141 (ENSFCAG00000044655) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Equus ANCESTRAL SPECIES 3 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000165286 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Donkey MODERN SPECIES 7 ST6GALNAC3 (ENSEASG00005017181) ASB17 (ENSEASG00005017184) MSH4 (ENSEASG00005017189) RABGGTB (ENSEASG00005017201) ACADM (ENSEASG00005017206) SLC44A5 (ENSEASG00005006854) LHX8 (ENSEASG00005007771) TYW3 (ENSEASG00005007776) CRYZ (ENSEASG00005007779) ERICH3 (ENSEASG00005007783) TNNI3K (ENSEASG00005007798) LRRC53 (ENSEASG00005007815) FPGT (ENSEASG00005007818) LRRIQ3 (ENSEASG00005007820) NEGR1 (ENSEASG00005007828) ZRANB2 (ENSEASG00005007831) #22 PTGER3 (ENSEASG00005007839) #23 CTH (ENSEASG00005007840) #25 ANKRD13C (ENSEASG00005007844) SRSF11 (ENSEASG00005007847) LRRC40 (ENSEASG00005007850) ENSEASG00005007851 ENSEASG00005007856 DEPDC1 (ENSEASG00005007861) RPE65 (ENSEASG00005007863) WLS (ENSEASG00005007867) DIRAS3 (ENSEASG00005038197) GNG12 (ENSEASG00005007872) GADD45A (ENSEASG00005024228) SERBP1 (ENSEASG00005007881) IL12RB2 (ENSEASG00005007885) Horse MODERN SPECIES 26 ASB17 (ENSECAG00000016398) MSH4 (ENSECAG00000017096) RABGGTB (ENSECAG00000020309) ACADM (ENSECAG00000021085) ENSECAG00000048365 SLC44A5 (ENSECAG00000022156) LHX8 (ENSECAG00000004881) TYW3 (ENSECAG00000007888) CRYZ (ENSECAG00000008254) ERICH3 (ENSECAG00000010486) TNNI3K (ENSECAG00000010595) LRRC53 (ENSECAG00000013802) FPGT (ENSECAG00000039694) LRRIQ3 (ENSECAG00000035457) NEGR1 (ENSECAG00000014027) ZRANB2 (ENSECAG00000014173) #22 PTGER3 (ENSECAG00000014239) #23 CTH (ENSECAG00000015050) #25 ANKRD13C (ENSECAG00000016794) SRSF11 (ENSECAG00000017756) LRRC40 (ENSECAG00000019554) LRRC7 (ENSECAG00000006937) DEPDC1 (ENSECAG00000008461) RPE65 (ENSECAG00000010170) WLS (ENSECAG00000012045) DIRAS3 (ENSECAG00000030001) GADD45A (ENSECAG00000040631) SERBP1 (ENSECAG00000014617) IL12RB2 (ENSECAG00000016537) IL23R (ENSECAG00000017239) C5H1orf141 (ENSECAG00000019495) Chiroptera ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Microbat MODERN SPECIES 1188 NEGR1 (ENSMLUG00000014558) ZRANB2 (ENSMLUG00000001762) #22 PTGER3 (ENSMLUG00000001754) #23 ENSMLUG00000025292 ENSMLUG00000028757 #25 Greater horseshoe bat MODERN SPECIES 27 ASB17 (ENSRFEG00010005712) MSH4 (ENSRFEG00010005666) RABGGTB (ENSRFEG00010005569) ACADM (ENSRFEG00010005513) SLC44A5 (ENSRFEG00010005444) LHX8 (ENSRFEG00010005406) ENSRFEG00010005382 TYW3 (ENSRFEG00010005359) CRYZ (ENSRFEG00010005320) ENSRFEG00010005090 LRRC53 (ENSRFEG00010005075) TNNI3K (ENSRFEG00010005059) FPGT (ENSRFEG00010005047) LRRIQ3 (ENSRFEG00010005038) NEGR1 (ENSRFEG00010005020) ZRANB2 (ENSRFEG00010005004) #22 ENSRFEG00010004991 #23 ENSRFEG00010004976 #25 ENSRFEG00010004954 SRSF11 (ENSRFEG00010004928) LRRC40 (ENSRFEG00010004902) LRRC7 (ENSRFEG00010004869) ENSRFEG00010004831 ENSRFEG00010004819 DEPDC1 (ENSRFEG00010004806) RPE65 (ENSRFEG00010004778) WLS (ENSRFEG00010004748) DIRAS3 (ENSRFEG00010004732) GADD45A (ENSRFEG00010004705) ENSRFEG00010004678 IL12RB2 (ENSRFEG00010004653) Megabat MODERN SPECIES 1089 ZRANB2 (ENSPVAG00000012510) #22 PTGER3 (ENSPVAG00000012508) #23 Artiodactyla ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Suina ANCESTRAL SPECIES 27 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Pig MODERN SPECIES 14 MSH4 (ENSSSCG00000003775) ENSSSCG00000046691 ACADM (ENSSSCG00000003776) SLC44A5 (ENSSSCG00000003777) LHX8 (ENSSSCG00000003778) ENSSSCG00000058640 TYW3 (ENSSSCG00000003779) CRYZ (ENSSSCG00000003780) ENSSSCG00000003781 TNNI3K (ENSSSCG00000040109) ENSSSCG00000033405 FPGT (ENSSSCG00000003783) LRRIQ3 (ENSSSCG00000003784) NEGR1 (ENSSSCG00000025085) ENSSSCG00000049727 ZRANB2 (ENSSSCG00000003787) #22 PTGER3 (ENSSSCG00000003788) #23 CTH (ENSSSCG00000003789) #25 ANKRD13C (ENSSSCG00000003790) SRSF11 (ENSSSCG00000003791) ENSSSCG00000003792 LRRC7 (ENSSSCG00000003793) ENSSSCG00000042518 DEPDC1 (ENSSSCG00000033443) RPE65 (ENSSSCG00000003794) WLS (ENSSSCG00000003795) DIRAS3 (ENSSSCG00000003797) GNG12 (ENSSSCG00000036505) GADD45A (ENSSSCG00000037066) SERBP1 (ENSSSCG00000003798) IL12RB2 (ENSSSCG00000003799) Chacoan peccary MODERN SPECIES 54 SLC44A5 (ENSCWAG00000006116) LHX8 (ENSCWAG00000006202) TYW3 (ENSCWAG00000006247) CRYZ (ENSCWAG00000006315) ENSCWAG00000006407 TNNI3K (ENSCWAG00000006459) LRRC53 (ENSCWAG00000006571) FPGT (ENSCWAG00000006606) LRRIQ3 (ENSCWAG00000006637) NEGR1 (ENSCWAG00000006715) ZRANB2 (ENSCWAG00000006781) #22 PTGER3 (ENSCWAG00000006818) #23 ENSCWAG00000006917 CTH (ENSCWAG00000006977) #25 ENSCWAG00000007276 ANKRD13C (ENSCWAG00000007305) SRSF11 (ENSCWAG00000007484) LRRC40 (ENSCWAG00000007563) LRRC7 (ENSCWAG00000007628) DEPDC1 (ENSCWAG00000008223) RPE65 (ENSCWAG00000005759) WLS (ENSCWAG00000005902) DIRAS3 (ENSCWAG00000006110) GNG12 (ENSCWAG00000006121) GADD45A (ENSCWAG00000006162) SERBP1 (ENSCWAG00000006245) Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Camelidae ANCESTRAL SPECIES 11 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.s ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Arabian camel MODERN SPECIES 4 ST6GALNAC3 (ENSCDRG00005012552) ASB17 (ENSCDRG00005012510) MSH4 (ENSCDRG00005012261) RABGGTB (ENSCDRG00005012036) ACADM (ENSCDRG00005011717) SLC44A5 (ENSCDRG00005011212) LHX8 (ENSCDRG00005011024) TYW3 (ENSCDRG00005010900) ENSCDRG00005010774 ENSCDRG00005010684 LRRC53 (ENSCDRG00005010584) TNNI3K (ENSCDRG00005010113) LRRIQ3 (ENSCDRG00005009954) ENSCDRG00005009889 NEGR1 (ENSCDRG00005009715) ZRANB2 (ENSCDRG00005009506) #22 PTGER3 (ENSCDRG00005009342) #23 CTH (ENSCDRG00005009028) #25 ANKRD13C (ENSCDRG00005008826) SRSF11 (ENSCDRG00005008759) LRRC40 (ENSCDRG00005008600) LRRC7 (ENSCDRG00005008143) DEPDC1 (ENSCDRG00005008010) RPE65 (ENSCDRG00005007822) WLS (ENSCDRG00005007433) DIRAS3 (ENSCDRG00005007399) GNG12 (ENSCDRG00005007385) GADD45A (ENSCDRG00005007265) SERBP1 (ENSCDRG00005007209) IL12RB2 (ENSCDRG00005006997) IL23R (ENSCDRG00005006826) Alpaca MODERN SPECIES 723 ZRANB2 (ENSVPAG00000002940) #22 PTGER3 (ENSVPAG00000002939) #23 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Pecora ANCESTRAL SPECIES 2 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154550.a.e.b.a.a.a ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000167450 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Yarkand deer MODERN SPECIES 12 SLC44A5 (ENSCHYG00000017668) LHX8 (ENSCHYG00000018366) ENSCHYG00000018638 TYW3 (ENSCHYG00000018698) CRYZ (ENSCHYG00000019116) ERICH3 (ENSCHYG00000019491) TNNI3K (ENSCHYG00000019830) LRRC53 (ENSCHYG00000020175) ENSCHYG00000020244 ENSCHYG00000020274 FPGT (ENSCHYG00000020308) LRRIQ3 (ENSCHYG00000020368) ENSCHYG00000020540 ENSCHYG00000020612 NEGR1 (ENSCHYG00000020697) ZRANB2 (ENSCHYG00000020949) #22 PTGER3 (ENSCHYG00000021260) #23 ENSCHYG00000021352 CTH (ENSCHYG00000021378) #25 ANKRD13C (ENSCHYG00000021606) ENSCHYG00000021795 SRSF11 (ENSCHYG00000021820) LRRC40 (ENSCHYG00000021953) LRRC7 (ENSCHYG00000022051) DEPDC1 (ENSCHYG00000022371) RPE65 (ENSCHYG00000022637) ENSCHYG00000022731 WLS (ENSCHYG00000022810) DIRAS3 (ENSCHYG00000023484) ENSCHYG00000023503 ENSCHYG00000023560 Percora_a ANCESTRAL SPECIES 1 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154550.a.e.b.a.a.a ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000167450 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Bovidae ANCESTRAL SPECIES 1 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154550.a.e.b.a.a.a ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000167450 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Bovinae ANCESTRAL SPECIES 1 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154550.a.e.b.a.a.a ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000167450 ENSGT00990000207423 ENSGT00940000159131 ENSGT00950000185699 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT01100000264350 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b.e ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198.c Bos ANCESTRAL SPECIES ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154550.a.e.b.a.a.a ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00990000207423 ENSGT00940000159131 ENSGT00940000167450 ENSGT00950000185699 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT01100000264350 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312.u #25 ENSGT00950000182928.B.d.b ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.a.a.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00940000161805.p.a.b ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b.e ENSGT00950000182964.a.a ENSGT00520000055591.a Bos_a ANCESTRAL SPECIES 1 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154550.a.e.b.a.a.a ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00990000207423 ENSGT00940000159131 ENSGT00940000167450 ENSGT00950000185699 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312.u #25 ENSGT00950000182928.B.d.b ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.a.a.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00940000161805.p.a.b ENSGT00940000165941 ENSGT00950000182913.B ENSGT00390000005897 ENSGT01100000263497.E.b.e ENSGT00940000164094 ENSGT00390000001618.cb.b Domestic yak MODERN SPECIES 22 ACADM (ENSBGRG00000003324) SLC44A5 (ENSBGRG00000003447) LHX8 (ENSBGRG00000003869) ENSBGRG00000003963 TYW3 (ENSBGRG00000003998) CRYZ (ENSBGRG00000004089) ENSBGRG00000004308 ENSBGRG00000004342 TNNI3K (ENSBGRG00000004378) ENSBGRG00000004831 ENSBGRG00000004847 FPGT (ENSBGRG00000004858) LRRIQ3 (ENSBGRG00000004929) ENSBGRG00000005068 NEGR1 (ENSBGRG00000005094) ZRANB2 (ENSBGRG00000005234) #22 PTGER3 (ENSBGRG00000005331) #23 ENSBGRG00000005391 CTH (ENSBGRG00000005403) #25 ANKRD13C (ENSBGRG00000005513) ENSBGRG00000007232 SRSF11 (ENSBGRG00000007267) LRRC40 (ENSBGRG00000007429) LRRC7 (ENSBGRG00000007643) ENSBGRG00000008029 DEPDC1 (ENSBGRG00000008047) ENSBGRG00000008289 RPE65 (ENSBGRG00000008339) WLS (ENSBGRG00000008504) DIRAS3 (ENSBGRG00000008874) ENSBGRG00000008894 Wild yak MODERN SPECIES 3071 ZRANB2 (ENSBMUG00000003401) #22 PTGER3 (ENSBMUG00000003340) #23 Bos_b ANCESTRAL SPECIES 1 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154550.a.e.b.a.a.a ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00940000167450 ENSGT00950000185699 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT01100000264350 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312.u #25 ENSGT00950000182928.B.d.b ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.a.a.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00940000161805.p.a.b ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b.e ENSGT00950000182964.a.a ENSGT00520000055591.a Cow MODERN SPECIES 22 ACADM (ENSBTAG00000024240) SLC44A5 (ENSBTAG00000001326) LHX8 (ENSBTAG00000019192) ENSBTAG00000049737 TYW3 (ENSBTAG00000005196) CRYZ (ENSBTAG00000003162) ENSBTAG00000017031 TNNI3K (ENSBTAG00000000965) ENSBTAG00000051817 ENSBTAG00000050657 FPGT (ENSBTAG00000038480) LRRIQ3 (ENSBTAG00000019401) ENSBTAG00000006600 NEGR1 (ENSBTAG00000055278) ENSBTAG00000005099 ZRANB2 (ENSBTAG00000002627) #22 PTGER3 (ENSBTAG00000019230) #23 CTH (ENSBTAG00000014791) #25 ANKRD13C (ENSBTAG00000015482) SRSF11 (ENSBTAG00000015474) LRRC40 (ENSBTAG00000008243) LRRC7 (ENSBTAG00000009338) DEPDC1 (ENSBTAG00000001343) ENSBTAG00000030890 RPE65 (ENSBTAG00000020494) WLS (ENSBTAG00000012976) DIRAS3 (ENSBTAG00000012182) GNG12 (ENSBTAG00000054533) GADD45A (ENSBTAG00000013860) SERBP1 (ENSBTAG00000012957) IL12RB2 (ENSBTAG00000009455) Hybrid Bos Indicus MODERN SPECIES 22 RABGGTB (ENSBIXG00005026016) ACADM (ENSBIXG00005025973) SLC44A5 (ENSBIXG00005025793) LHX8 (ENSBIXG00005004323) ENSBIXG00005025392 TYW3 (ENSBIXG00005025374) CRYZ (ENSBIXG00005005564) ERICH3 (ENSBIXG00005025175) TNNI3K (ENSBIXG00005004265) ENSBIXG00005024887 ENSBIXG00005004246 LRRIQ3 (ENSBIXG00005024856) ENSBIXG00005024686 NEGR1 (ENSBIXG00005024619) ENSBIXG00005004195 ZRANB2 (ENSBIXG00005024548) #22 ENSBIXG00005024494 #23 CTH (ENSBIXG00005024430) #25 ENSBIXG00005006847 ANKRD13C (ENSBIXG00005004155) ENSBIXG00005006287 SRSF11 (ENSBIXG00005007179) LRRC40 (ENSBIXG00005024169) LRRC7 (ENSBIXG00005024014) ENSBIXG00005006675 DEPDC1 (ENSBIXG00005023771) ENSBIXG00005023720 RPE65 (ENSBIXG00005023709) WLS (ENSBIXG00005023640) DIRAS3 (ENSBIXG00005023520) GADD45A (ENSBIXG00005023475) American bison MODERN SPECIES 3187 NEGR1 (ENSBBBG00000002512) ENSBBBG00000002502 ZRANB2 (ENSBBBG00000002498) #22 PTGER3 (ENSBBBG00000012819) #23 CTH (ENSBBBG00000012812) #25 ANKRD13C (ENSBBBG00000012769) SRSF11 (ENSBBBG00000012746) LRRC40 (ENSBBBG00000002456) LRRC7 (ENSBBBG00000007250) Caprinae DUPLICATION Caprinae ANCESTRAL SPECIES 2 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154550.a.e.b.a.a.a ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000167450 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00390000016794.b.o ENSGT00940000159289 ENSGT00730000111078.`b #22 ENSGT01030000234559.b #23 ENSGT00940000167970.b ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Rambouillet Sheep MODERN SPECIES MSH4 (ENSOARG00020016767) RABGGTB (ENSOARG00020016603) ENSOARG00020016546 SLC44A5 (ENSOARG00020015606) LHX8 (ENSOARG00020015425) ENSOARG00020015374 TYW3 (ENSOARG00020015319) CRYZ (ENSOARG00020015086) TNNI3K (ENSOARG00020014602) FPGT (ENSOARG00020014548) HS3ST3B1 (ENSOARG00020014261) ENSOARG00020014153 RPRM (ENSOARG00020014137) NEGR1 (ENSOARG00020014000) ENSOARG00020013954 ENSOARG00020013817 #22 PTGER3 (ENSOARG00020013470) #23 ENSOARG00020013423 ENSOARG00020013381 CTH (ENSOARG00020013082) #25 ANKRD13C (ENSOARG00020012714) SRSF11 (ENSOARG00020012616) LRRC40 (ENSOARG00020012472) LRRC7 (ENSOARG00020011350) DEPDC1 (ENSOARG00020010867) RPE65 (ENSOARG00020010689) WLS (ENSOARG00020010326) DIRAS3 (ENSOARG00020010267) GNG12 (ENSOARG00020010213) GADD45A (ENSOARG00020009930) SERBP1 (ENSOARG00020009805) Goat MODERN SPECIES 22 ENSCHIG00000012888 ENSCHIG00000001515 ENSCHIG00000013780 SLC44A5 (ENSCHIG00000026769) LHX8 (ENSCHIG00000020727) ENSCHIG00000011224 TYW3 (ENSCHIG00000009333) CRYZ (ENSCHIG00000017286) ERICH3 (ENSCHIG00000021535) ENSCHIG00000026455 TNNI3K (ENSCHIG00000012349) FPGT (ENSCHIG00000021991) LRRIQ3 (ENSCHIG00000018471) ENSCHIG00000025873 ENSCHIG00000011314 ENSCHIG00000009410 #22 PTGER3 (ENSCHIG00000020559) #23 ENSCHIG00000026245 CTH (ENSCHIG00000019727) #25 ANKRD13C (ENSCHIG00000021359) SRSF11 (ENSCHIG00000025295) LRRC40 (ENSCHIG00000017526) LRRC7 (ENSCHIG00000026785) DEPDC1 (ENSCHIG00000010008) RPE65 (ENSCHIG00000023075) ENSCHIG00000008135 WLS (ENSCHIG00000015817) GNG12 (ENSCHIG00000015506) GADD45A (ENSCHIG00000025537) ENSCHIG00000011544 SERBP1 (ENSCHIG00000026670) Caprinae ANCESTRAL SPECIES ENSGT00730000111078.ab #22 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 6 ENSOARG00020023102 ENSOARG00020023161 ENSOARG00020023185 JRKL (ENSOARG00020023202) ENSOARG00020023333 MAML2 (ENSOARG00020023344) ENSOARG00020023366 CEP57 (ENSOARG00020023483) FAM76B (ENSOARG00020023594) SESN3 (ENSOARG00020023675) ENDOD1 (ENSOARG00020023802) KDM4D (ENSOARG00020023815) CWC15 (ENSOARG00020023834) AMOTL1 (ENSOARG00020023880) PIWIL4 (ENSOARG00020024217) ENSOARG00020024270 #22 FUT4 (ENSOARG00020024279) C11orf97 (ENSOARG00020024290) CWF19L2 (ENSOARG00020024318) OTX2 (ENSOARG00020024485) GUCY1A2 (ENSOARG00020024499) ELMOD1 (ENSOARG00020010015) ENSOARG00020010502 SLC35F2 (ENSOARG00020010531) RAB39A (ENSOARG00020010714) CUL5 (ENSOARG00020010776) ACAT1 (ENSOARG00020011001) NPAT (ENSOARG00020011163) ATM (ENSOARG00020011525) C11orf65 (ENSOARG00020012048) ENSOARG00020012131 Rambouillet Sheep MODERN SPECIES 3 ACBD3 (ENSOARG00020018756) MIXL1 (ENSOARG00020018842) LIN9 (ENSOARG00020018902) PARP1 (ENSOARG00020019277) STUM (ENSOARG00020019418) ITPKB (ENSOARG00020019465) PSEN2 (ENSOARG00020019535) COQ8A (ENSOARG00020019681) CDC42BPA (ENSOARG00020019926) AHCTF1 (ENSOARG00020003268) ENSOARG00020003724 SCCPDH (ENSOARG00020003810) ENSOARG00020003854 TFB2M (ENSOARG00020003896) SMYD3 (ENSOARG00020003928) ENSOARG00020004035 #22 KIF26B (ENSOARG00020004096) EFCAB2 (ENSOARG00020004432) ENSOARG00020004467 HNRNPU (ENSOARG00020004518) COX20 (ENSOARG00020004998) DESI2 (ENSOARG00020005026) ENSOARG00020005072 ENSOARG00020005105 C1orf100 (ENSOARG00020005127) ZBTB18 (ENSOARG00020005168) AKT3 (ENSOARG00020005210) CEP170 (ENSOARG00020005464) PLD5 (ENSOARG00020005705) ENSOARG00020005851 MAP1LC3C (ENSOARG00020005910) Goat MODERN SPECIES 11 LRP1B (ENSCHIG00000012788) ENSCHIG00000024840 KYNU (ENSCHIG00000025717) ENSCHIG00000024301 ARHGAP15 (ENSCHIG00000014079) GTDC1 (ENSCHIG00000022649) ZEB2 (ENSCHIG00000020961) ENSCHIG00000012606 ENSCHIG00000026414 ACVR2A (ENSCHIG00000013353) ORC4 (ENSCHIG00000023781) MBD5 (ENSCHIG00000008638) EPC2 (ENSCHIG00000024313) KIF5C (ENSCHIG00000012226) LYPD6B (ENSCHIG00000014675) ENSCHIG00000026876 #22 LYPD6 (ENSCHIG00000018947) MMADHC (ENSCHIG00000026029) ENSCHIG00000020042 ENSCHIG00000010348 RND3 (ENSCHIG00000022258) RBM43 (ENSCHIG00000019526) NMI (ENSCHIG00000025341) TNFAIP6 (ENSCHIG00000013151) RIF1 (ENSCHIG00000020327) NEB (ENSCHIG00000014281) ARL5A (ENSCHIG00000025329) CACNB4 (ENSCHIG00000013367) ENSCHIG00000022060 STAM2 (ENSCHIG00000020598) ENSCHIG00000010047 Siberian musk deer MODERN SPECIES 339 MSH4 (ENSMMSG00000011952) RABGGTB (ENSMMSG00000012035) ACADM (ENSMMSG00000012146) SLC44A5 (ENSMMSG00000012388) ENSMMSG00000012611 LHX8 (ENSMMSG00000012627) ENSMMSG00000012700 TYW3 (ENSMMSG00000012727) CRYZ (ENSMMSG00000012762) ERICH3 (ENSMMSG00000012862) TNNI3K (ENSMMSG00000012893) ENSMMSG00000012918 FPGT (ENSMMSG00000012942) LRRIQ3 (ENSMMSG00000012955) NEGR1 (ENSMMSG00000013007) ZRANB2 (ENSMMSG00000013063) #22 PTGER3 (ENSMMSG00000013125) #23 CTH (ENSMMSG00000013275) #25 ENSMMSG00000013321 ANKRD13C (ENSMMSG00000004375) SRSF11 (ENSMMSG00000004414) LRRC40 (ENSMMSG00000004447) LRRC7 (ENSMMSG00000004578) DEPDC1 (ENSMMSG00000005154) RPE65 (ENSMMSG00000005215) ENSMMSG00000005268 WLS (ENSMMSG00000005308) DIRAS3 (ENSMMSG00000005467) GNG12 (ENSMMSG00000005481) GADD45A (ENSMMSG00000005535) ENSMMSG00000005637 Cetacea ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Blue whale MODERN SPECIES MSH4 (ENSBMSG00010008797) ENSBMSG00010008772 ENSBMSG00010008751 ACADM (ENSBMSG00010008702) SLC44A5 (ENSBMSG00010008642) LHX8 (ENSBMSG00010008610) TYW3 (ENSBMSG00010008590) CRYZ (ENSBMSG00010008544) ENSBMSG00010008521 LRRC53 (ENSBMSG00010008498) TNNI3K (ENSBMSG00010008462) FPGT (ENSBMSG00010008441) LRRIQ3 (ENSBMSG00010005078) ENSBMSG00010005055 NEGR1 (ENSBMSG00010005031) ZRANB2 (ENSBMSG00010005010) #22 PTGER3 (ENSBMSG00010004995) #23 ENSBMSG00010004991 CTH (ENSBMSG00010004973) #25 ANKRD13C (ENSBMSG00010004950) SRSF11 (ENSBMSG00010004935) LRRC40 (ENSBMSG00010004930) LRRC7 (ENSBMSG00010004781) DEPDC1 (ENSBMSG00010004720) RPE65 (ENSBMSG00010004694) WLS (ENSBMSG00010004687) ENSBMSG00010004680 GNG12 (ENSBMSG00010004664) GADD45A (ENSBMSG00010004628) ENSBMSG00010004579 IL12RB2 (ENSBMSG00010004316) Odontoceti ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B.ib ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Sperm whale MODERN SPECIES 15 ENSPCTG00005018216 ASB17 (ENSPCTG00005018262) MSH4 (ENSPCTG00005018320) ENSPCTG00005018542 ACADM (ENSPCTG00005018751) SLC44A5 (ENSPCTG00005019226) LHX8 (ENSPCTG00005019613) TYW3 (ENSPCTG00005019756) CRYZ (ENSPCTG00005019878) ENSPCTG00005020000 TNNI3K (ENSPCTG00005020066) LRRC53 (ENSPCTG00005020239) FPGT (ENSPCTG00005020275) ENSPCTG00005020300 NEGR1 (ENSPCTG00005020328) ZRANB2 (ENSPCTG00005020419) #22 PTGER3 (ENSPCTG00005020486) #23 CTH (ENSPCTG00005020597) #25 ANKRD13C (ENSPCTG00005020681) SRSF11 (ENSPCTG00005009159) LRRC40 (ENSPCTG00005009424) LRRC7 (ENSPCTG00005010553) DEPDC1 (ENSPCTG00005012486) RPE65 (ENSPCTG00005013056) WLS (ENSPCTG00005013653) DIRAS3 (ENSPCTG00005014188) GNG12 (ENSPCTG00005014267) GADD45A (ENSPCTG00005014488) SERBP1 (ENSPCTG00005014874) IL12RB2 (ENSPCTG00005015758) IL23R (ENSPCTG00005017307) Odontoceti_a ANCESTRAL SPECIES ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B.ib ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Odontoceti_b ANCESTRAL SPECIES ENSGT00550000074897 ENSGT00950000183128.B.ib ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00950000182926.a.b ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Monodontidae ANCESTRAL SPECIES ENSGT00550000074897 ENSGT00950000183128.B.ib ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00950000182926.a.b ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Narwhal MODERN SPECIES 304 ENSMMNG00015008547 MSH4 (ENSMMNG00015008573) ENSMMNG00015008600 ACADM (ENSMMNG00015008645) SLC44A5 (ENSMMNG00015008716) LHX8 (ENSMMNG00015008773) TYW3 (ENSMMNG00015008797) CRYZ (ENSMMNG00015008831) ENSMMNG00015008854 TNNI3K (ENSMMNG00015008876) LRRC53 (ENSMMNG00015008905) FPGT (ENSMMNG00015008924) ENSMMNG00015008934 ENSMMNG00015004124 NEGR1 (ENSMMNG00015004300) ZRANB2 (ENSMMNG00015004587) #22 PTGER3 (ENSMMNG00015004807) #23 ENSMMNG00015005022 ENSMMNG00015005137 CTH (ENSMMNG00015005464) #25 ANKRD13C (ENSMMNG00015006243) SRSF11 (ENSMMNG00015006795) LRRC40 (ENSMMNG00015007303) LRRC7 (ENSMMNG00015008751) DEPDC1 (ENSMMNG00015010717) RPE65 (ENSMMNG00015011109) WLS (ENSMMNG00015011864) DIRAS3 (ENSMMNG00015012826) GNG12 (ENSMMNG00015012942) GADD45A (ENSMMNG00015013267) SERBP1 (ENSMMNG00015013615) Beluga whale MODERN SPECIES 74 MSH4 (ENSDLEG00000021517) ENSDLEG00000021496 ACADM (ENSDLEG00000021490) SLC44A5 (ENSDLEG00000021483) LHX8 (ENSDLEG00000021479) TYW3 (ENSDLEG00000021476) CRYZ (ENSDLEG00000021475) ERICH3 (ENSDLEG00000021474) ENSDLEG00000021472 TNNI3K (ENSDLEG00000021469) FPGT (ENSDLEG00000021467) ENSDLEG00000021465 ENSDLEG00000021462 ENSDLEG00000021459 NEGR1 (ENSDLEG00000021457) ZRANB2 (ENSDLEG00000021455) #22 PTGER3 (ENSDLEG00000021453) #23 CTH (ENSDLEG00000021449) #25 ANKRD13C (ENSDLEG00000021447) SRSF11 (ENSDLEG00000021445) ENSDLEG00000021443 LRRC40 (ENSDLEG00000021441) LRRC7 (ENSDLEG00000021431) DEPDC1 (ENSDLEG00000021426) RPE65 (ENSDLEG00000021421) WLS (ENSDLEG00000021417) DIRAS3 (ENSDLEG00000021415) GNG12 (ENSDLEG00000021413) GADD45A (ENSDLEG00000021410) SERBP1 (ENSDLEG00000021405) IL12RB2 (ENSDLEG00000021402) Vaquita MODERN SPECIES ST6GALNAC3 (ENSPSNG00000001901) ASB17 (ENSPSNG00000001883) MSH4 (ENSPSNG00000001831) ENSPSNG00000001765 ACADM (ENSPSNG00000001696) SLC44A5 (ENSPSNG00000001574) LHX8 (ENSPSNG00000001488) TYW3 (ENSPSNG00000001452) CRYZ (ENSPSNG00000001395) ENSPSNG00000001349 TNNI3K (ENSPSNG00000001272) FPGT (ENSPSNG00000001225) LRRIQ3 (ENSPSNG00000001174) ENSPSNG00000001141 NEGR1 (ENSPSNG00000001115) ZRANB2 (ENSPSNG00000001069) #22 PTGER3 (ENSPSNG00000001032) #23 ENSPSNG00000001013 CTH (ENSPSNG00000000964) #25 ANKRD13C (ENSPSNG00000000907) SRSF11 (ENSPSNG00000000868) LRRC40 (ENSPSNG00000000830) LRRC7 (ENSPSNG00000000776) DEPDC1 (ENSPSNG00000000663) RPE65 (ENSPSNG00000000590) WLS (ENSPSNG00000000517) DIRAS3 (ENSPSNG00000000480) GNG12 (ENSPSNG00000000467) GADD45A (ENSPSNG00000000436) SERBP1 (ENSPSNG00000000393) IL12RB2 (ENSPSNG00000000245) Dolphin MODERN SPECIES 490 ZRANB2 (ENSTTRG00000014680) #22 PTGER3 (ENSTTRG00000014672) #23 Atlantogenata DUPLICATION Atlantogenata ANCESTRAL SPECIES ENSGT00730000111078.i #22 Xenarthra ANCESTRAL SPECIES 39 ENSGT00730000111078.i #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Armadillo MODERN SPECIES 4628 ZRANB2 (ENSDNOG00000010455) #22 PTGER3 (ENSDNOG00000010437) #23 CTH (ENSDNOG00000045200) #25 ENSDNOG00000046207 ANKRD13C (ENSDNOG00000005594) SRSF11 (ENSDNOG00000008603) LRRC40 (ENSDNOG00000001807) LRRC7 (ENSDNOG00000001801) DEPDC1 (ENSDNOG00000040135) RPE65 (ENSDNOG00000037707) WLS (ENSDNOG00000003500) DIRAS3 (ENSDNOG00000039860) GNG12 (ENSDNOG00000040556) GADD45A (ENSDNOG00000038488) SERBP1 (ENSDNOG00000014249) IL12RB2 (ENSDNOG00000007767) Atlantogenata DUPLICATION Atlantogenata ANCESTRAL SPECIES ENSGT00730000111078.j.a #22 Afrotheria ANCESTRAL SPECIES ENSGT00730000111078.j.a #22 Tenrec MODERN SPECIES 2837 ENSETEG00000014461 #22 Atlantogenata ANCESTRAL SPECIES 11 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000167450 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404.d ENSGT00940000159289 ENSGT00730000111078.j.b #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Afrotheria ANCESTRAL SPECIES 21 ENSGT00940000156273 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078.j.b #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Afrotheria_a ANCESTRAL SPECIES 20 ENSGT00940000156273 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078.j.b #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Hyrax MODERN SPECIES 2922 ZRANB2 (ENSPCAG00000015159) #22 PTGER3 (ENSPCAG00000015103) #23 Elephant MODERN SPECIES 145 PIGK (ENSLAFG00000021632) ST6GALNAC5 (ENSLAFG00000001461) ENSLAFG00000003495 ASB17 (ENSLAFG00000015332) MSH4 (ENSLAFG00000015327) RABGGTB (ENSLAFG00000003111) ACADM (ENSLAFG00000003112) SLC44A5 (ENSLAFG00000015047) LHX8 (ENSLAFG00000015040) TYW3 (ENSLAFG00000011373) CRYZ (ENSLAFG00000011371) ENSLAFG00000011360 TNNI3K (ENSLAFG00000011342) FPGT (ENSLAFG00000027887) ENSLAFG00000003594 ZRANB2 (ENSLAFG00000017760) #22 PTGER3 (ENSLAFG00000018598) #23 CTH (ENSLAFG00000018687) #25 ANKRD13C (ENSLAFG00000015894) SRSF11 (ENSLAFG00000015882) LRRC40 (ENSLAFG00000004632) LRRC7 (ENSLAFG00000021807) DEPDC1 (ENSLAFG00000013772) RPE65 (ENSLAFG00000018223) WLS (ENSLAFG00000022046) ENSLAFG00000002162 GNG12 (ENSLAFG00000003240) GADD45A (ENSLAFG00000009362) ENSLAFG00000000012 IL12RB2 (ENSLAFG00000000010) ENSLAFG00000030915 Tenrec DUPLICATION Tenrec DUPLICATION Tenrec MODERN SPECIES 17321 ENSETEG00000015825 #22 Tenrec MODERN SPECIES 14324 ENSETEG00000017849 #22 Tenrec MODERN SPECIES 11239 ENSETEG00000006716 #22 Xenarthra ANCESTRAL SPECIES ENSGT00730000111078.j.b #22 Sloth MODERN SPECIES 13697 ZRANB2 (ENSCHOG00000004408) #22 Marsupialia ANCESTRAL SPECIES 37 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000167450 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000169329 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT00940000158196 ENSGT00940000159053 ENSGT00940000157484 Opossum MODERN SPECIES 1 ENSMODG00000012097 ENSMODG00000028149 ENSMODG00000025651 ENSMODG00000012376 ENSMODG00000012388 KYAT3 (ENSMODG00000012408) GTF2B (ENSMODG00000012414) PKN2 (ENSMODG00000012423) ENSMODG00000000298 TNNI3K (ENSMODG00000000344) ENSMODG00000000352 FPGT (ENSMODG00000047758) ENSMODG00000025652 ENSMODG00000000356 NEGR1 (ENSMODG00000000482) ZRANB2 (ENSMODG00000000504) #22 ENSMODG00000025217 #23 ANKRD13C (ENSMODG00000000531) LRRC40 (ENSMODG00000000604) LRRC7 (ENSMODG00000000649) DEPDC1 (ENSMODG00000000686) RPE65 (ENSMODG00000000710) ENSMODG00000000721 ENSMODG00000040341 WLS (ENSMODG00000000754) ENSMODG00000000766 GNG12 (ENSMODG00000000771) GADD45A (ENSMODG00000000788) SERBP1 (ENSMODG00000000802) ENSMODG00000000859 ENSMODG00000000877 Marsupialia_b ANCESTRAL SPECIES 33 ENSGT00390000018077.a ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00940000167450 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT00940000158196 ENSGT00940000159053 ENSGT00940000157484 Diprotodontia ANCESTRAL SPECIES 69 ENSGT00390000018077.a ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000167450 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT00940000158196 ENSGT00940000159053 ENSGT00940000157484 Diprotodontia_a ANCESTRAL SPECIES 52 ENSGT00940000159735 ENSGT00390000018077.a ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429.c ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000167450 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT00940000158196 ENSGT00940000159053 ENSGT00940000157484 koala MODERN SPECIES 49 NEGR1 (ENSPCIG00000035617) ZRANB2 (ENSPCIG00000001426) #22 PTGER3 (ENSPCIG00000001445) #23 CTH (ENSPCIG00000002022) #25 ANKRD13C (ENSPCIG00000002059) SRSF11 (ENSPCIG00000002083) LRRC40 (ENSPCIG00000002115) ENSPCIG00000002303 ENSPCIG00000036862 DEPDC1 (ENSPCIG00000021948) RPE65 (ENSPCIG00000021949) ENSPCIG00000021951 WLS (ENSPCIG00000021952) ENSPCIG00000021954 GNG12 (ENSPCIG00000035012) ENSPCIG00000028889 SERBP1 (ENSPCIG00000028893) Common wonbat MODERN SPECIES 1040 ENSVURG00010011900 ENSVURG00010011905 ASB17 (ENSVURG00010011910) ENSVURG00010011913 RABGGTB (ENSVURG00010011926) ENSVURG00010011941 ENSVURG00010011979 LHX8 (ENSVURG00010012906) TYW3 (ENSVURG00010012913) CRYZ (ENSVURG00010012924) TNNI3K (ENSVURG00010012956) ENSVURG00010013013 FPGT (ENSVURG00010013015) ENSVURG00010013021 NEGR1 (ENSVURG00010013039) ZRANB2 (ENSVURG00010013054) #22 PTGER3 (ENSVURG00010013077) #23 ENSVURG00010013108 CTH (ENSVURG00010013113) #25 ANKRD13C (ENSVURG00010013121) SRSF11 (ENSVURG00010013206) ENSVURG00010013222 LRRC40 (ENSVURG00010013229) ENSVURG00010013244 ENSVURG00010013254 DEPDC1 (ENSVURG00010013276) RPE65 (ENSVURG00010013292) ENSVURG00010013301 WLS (ENSVURG00010013312) ENSVURG00010013330 GNG12 (ENSVURG00010013343) Wallaby MODERN SPECIES 3808 ZRANB2 (ENSMEUG00000010336) #22 Platypus MODERN SPECIES 15 ST6GALNAC5 (ENSOANG00000015358) ENSOANG00000047181 ENSOANG00000030326 ASB17 (ENSOANG00000009850) MSH4 (ENSOANG00000014868) ENSOANG00000008205 SLC44A5 (ENSOANG00000020242) LHX8 (ENSOANG00000013288) TYW3 (ENSOANG00000039270) CRYZ (ENSOANG00000002171) ENSOANG00000002170 TNNI3K (ENSOANG00000030986) FPGT (ENSOANG00000045285) ENSOANG00000030110 ENSOANG00000040243 ZRANB2 (ENSOANG00000044086) #22 PTGER3 (ENSOANG00000044832) #23 CTH (ENSOANG00000015532) #25 ANKRD13C (ENSOANG00000015530) SRSF11 (ENSOANG00000015528) LRRC40 (ENSOANG00000015526) LRRC7 (ENSOANG00000015522) ENSOANG00000013830 ENSOANG00000040452 LDB2 (ENSOANG00000004866) TAPT1 (ENSOANG00000004220) ENSOANG00000013966 ENSOANG00000039137 ENSOANG00000015680 BST1 (ENSOANG00000051248) FBXL5 (ENSOANG00000010867) Sauria ANCESTRAL SPECIES 7 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000169329 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Archelosauria ANCESTRAL SPECIES 9 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000169329 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Archosauria ANCESTRAL SPECIES 11 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000169329 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00910000148470 ENSGT00730000110872.b.d ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Aves ANCESTRAL SPECIES 7 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Neognathae ANCESTRAL SPECIES 8 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Galloanserae ANCESTRAL SPECIES 8 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Anatidae ANCESTRAL SPECIES 5 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00520000055591.a ENSGT00940000159829 ENSGT00940000160050.l ENSGT00940000155665 Pink-footed goose MODERN SPECIES 1 MSH4 (ENSABRG00000017349) RABGGTB (ENSABRG00000017415) ENSABRG00000017442 SLC44A5 (ENSABRG00000017451) LHX8 (ENSABRG00000017466) TYW3 (ENSABRG00000017491) CRYZ (ENSABRG00000017502) ENSABRG00000017532 TNNI3K (ENSABRG00000017567) FPGT (ENSABRG00000017593) NEGR1 (ENSABRG00000017634) ZRANB2 (ENSABRG00000017652) #22 PTGER3 (ENSABRG00000017654) #23 CTH (ENSABRG00000017657) #25 ANKRD13C (ENSABRG00000017661) SRSF11 (ENSABRG00000017665) LRRC40 (ENSABRG00000017671) LRRC7 (ENSABRG00000017686) DEPDC1 (ENSABRG00000017766) RPE65 (ENSABRG00000017792) ENSABRG00000017842 WLS (ENSABRG00000017850) ENSABRG00000017860 GNG12 (ENSABRG00000017870) ENSABRG00000017872 IL12RB2 (ENSABRG00000017873) ENSABRG00000017881 Duck MODERN SPECIES 26 MSH4 (ENSAPLG00000014286) ENSAPLG00000030945 RABGGTB (ENSAPLG00000013952) SLC44A5 (ENSAPLG00000013016) LHX8 (ENSAPLG00000012727) TYW3 (ENSAPLG00000019658) CRYZ (ENSAPLG00000012367) ENSAPLG00000012188 ENSAPLG00000023419 FPGT (ENSAPLG00000021822) ENSAPLG00000027128 NEGR1 (ENSAPLG00000011651) ZRANB2 (ENSAPLG00000011345) #22 PTGER3 (ENSAPLG00000019095) #23 CTH (ENSAPLG00000010832) #25 ANKRD13C (ENSAPLG00000010438) SRSF11 (ENSAPLG00000010241) LRRC40 (ENSAPLG00000009971) LRRC7 (ENSAPLG00000009688) DEPDC1 (ENSAPLG00000002417) RPE65 (ENSAPLG00000015511) ENSAPLG00000015331 WLS (ENSAPLG00000014906) ENSAPLG00000025200 GNG12 (ENSAPLG00000022574) SERBP1 (ENSAPLG00000023710) IL12RB2 (ENSAPLG00000008716) MIER1 (ENSAPLG00000008492) Phasianidae ANCESTRAL SPECIES 7 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Phasianidae_b ANCESTRAL SPECIES 7 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Chicken MODERN SPECIES 37 ENSGALG00010024113 SGF29 (ENSGALG00010024102) RABGGTB (ENSGALG00010024073) SLC44A5 (ENSGALG00010024058) LHX8 (ENSGALG00010024023) TYW3 (ENSGALG00010024017) CRYZ (ENSGALG00010024016) ERICH3 (ENSGALG00010024003) TNNI3K (ENSGALG00010023987) FPGT (ENSGALG00010023962) ENSGALG00010023958 NEGR1 (ENSGALG00010023942) ZRANB2 (ENSGALG00010023917) #22 PTGER3 (ENSGALG00010023902) #23 CTH (ENSGALG00010023888) #25 ANKRD13C (ENSGALG00010023704) SRSF11 (ENSGALG00010023693) LRRC40 (ENSGALG00010023641) LRRC7 (ENSGALG00010023606) DEPDC1 (ENSGALG00010023574) RPE65 (ENSGALG00010023506) MCCC2L (ENSGALG00010023479) WLS (ENSGALG00010023422) GNG12 (ENSGALG00010023389) GADD45A (ENSGALG00010023362) SERBP1 (ENSGALG00010023282) IL12RB2 (ENSGALG00010023249) ENSGALG00010023235 Japanese quail MODERN SPECIES 26 MSH4 (ENSCJPG00005014542) RABGGTB (ENSCJPG00005014539) SLC44A5 (ENSCJPG00005014538) LHX8 (ENSCJPG00005014537) TYW3 (ENSCJPG00005014535) CRYZ (ENSCJPG00005014534) ENSCJPG00005014533 TNNI3K (ENSCJPG00005014532) FPGT (ENSCJPG00005014531) NEGR1 (ENSCJPG00005014529) ZRANB2 (ENSCJPG00005014528) #22 PTGER3 (ENSCJPG00005014527) #23 CTH (ENSCJPG00005014526) #25 ANKRD13C (ENSCJPG00005014525) ENSCJPG00005014524 SRSF11 (ENSCJPG00005014523) LRRC40 (ENSCJPG00005014522) LRRC7 (ENSCJPG00005014521) DEPDC1 (ENSCJPG00005014520) RPE65 (ENSCJPG00005014519) ENSCJPG00005014518 WLS (ENSCJPG00005014517) GNG12 (ENSCJPG00005014515) GADD45A (ENSCJPG00005014514) SERBP1 (ENSCJPG00005014513) ENSCJPG00005014511 Neognathae_b ANCESTRAL SPECIES 10 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00910000148470 ENSGT00730000110872.b.d ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Neognathae_c ANCESTRAL SPECIES 7 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Golden eagle MODERN SPECIES 3 ENSACCG00020013016 MSH4 (ENSACCG00020012986) RABGGTB (ENSACCG00020012931) ACADM (ENSACCG00020012866) SLC44A5 (ENSACCG00020012800) LHX8 (ENSACCG00020012766) TYW3 (ENSACCG00020012740) CRYZ (ENSACCG00020012699) TNNI3K (ENSACCG00020012633) FPGT (ENSACCG00020012607) NEGR1 (ENSACCG00020012583) ZRANB2 (ENSACCG00020012561) #22 PTGER3 (ENSACCG00020012543) #23 CTH (ENSACCG00020012509) #25 ANKRD13C (ENSACCG00020012479) ENSACCG00020012455 SRSF11 (ENSACCG00020012425) LRRC40 (ENSACCG00020012379) LRRC7 (ENSACCG00020012302) DEPDC1 (ENSACCG00020012143) RPE65 (ENSACCG00020012097) ENSACCG00020011949 WLS (ENSACCG00020011917) ENSACCG00020011874 GNG12 (ENSACCG00020011821) GADD45A (ENSACCG00020011721) SERBP1 (ENSACCG00020011670) Kakapo MODERN SPECIES 25 ENSSHBG00005006675 RABGGTB (ENSSHBG00005006629) ACADM (ENSSHBG00005006605) SLC44A5 (ENSSHBG00005006561) LHX8 (ENSSHBG00005006538) TYW3 (ENSSHBG00005006522) CRYZ (ENSSHBG00005006508) ENSSHBG00005006455 TNNI3K (ENSSHBG00005006410) FPGT (ENSSHBG00005006383) NEGR1 (ENSSHBG00005006353) ZRANB2 (ENSSHBG00005006322) #22 PTGER3 (ENSSHBG00005006310) #23 CTH (ENSSHBG00005006295) #25 ANKRD13C (ENSSHBG00005006277) SRSF11 (ENSSHBG00005006243) LRRC40 (ENSSHBG00005006229) LRRC7 (ENSSHBG00005005421) DEPDC1 (ENSSHBG00005005262) RPE65 (ENSSHBG00005005243) ENSSHBG00005005218 WLS (ENSSHBG00005000693) ENSSHBG00005015678 GNG12 (ENSSHBG00005015675) GADD45A (ENSSHBG00005015670) SERBP1 (ENSSHBG00005015665) ENSSHBG00005015653 Passeriformes ANCESTRAL SPECIES 8 ENSGT00550000075046 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00910000148470 ENSGT00730000110872.b.d ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Passeriformes_d ANCESTRAL SPECIES 9 ENSGT00550000075046 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a.g.b Passeriformes_g ANCESTRAL SPECIES 10 ENSGT00550000075046 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312.q #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00390000000312.r #25 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a Passeroidea ANCESTRAL SPECIES 9 ENSGT00550000075046 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000154882 ENSGT00940000153304.C ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312.q #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a.g.b Zebra finch DUPLICATION Zebra finch MODERN SPECIES 30 NAA20 (ENSTGUG00000010465) ACADM (ENSTGUG00000010443) SLC44A5 (ENSTGUG00000010420) LHX8 (ENSTGUG00000010411) CRYZ (ENSTGUG00000010402) TYW3 (ENSTGUG00000027800) ENSTGUG00000023680 TNNI3K (ENSTGUG00000010382) FPGT (ENSTGUG00000024062) ENSTGUG00000010364 ENSTGUG00000022821 #22 ENSTGUG00000025601 #23 ENSTGUG00000019662 ENSTGUG00000026580 SRSF11 (ENSTGUG00000026513) ENSTGUG00000026570 ENSTGUG00000010266 #25 ENSTGUG00000010258 RPE65 (ENSTGUG00000010240) ENSTGUG00000010227 ENSTGUG00000018956 DIRAS3 (ENSTGUG00000026090) ENSTGUG00000028084 ENSTGUG00000021708 ENSTGUG00000022830 ENSTGUG00000022177 Zebra finch MODERN SPECIES 30 ENSTGUG00000027339 ENSTGUG00000021508 ENSTGUG00000010160 ENSTGUG00000029074 ENSTGUG00000025877 ENSTGUG00000010065 ENSTGUG00000019287 LEPR (ENSTGUG00000010030) ENSTGUG00000025994 DNAJC6 (ENSTGUG00000025462) ENSTGUG00000019255 ENSTGUG00000024368 ENSTGUG00000019856 ENSTGUG00000018848 ENSTGUG00000022692 ENSTGUG00000028165 #22 ENSTGUG00000024427 #23 ENSTGUG00000010330 ENSTGUG00000010302 ENSTGUG00000010284 ENSTGUG00000010275 ENSTGUG00000028389 #25 ENSTGUG00000019510 ENSTGUG00000022521 ENSTGUG00000010207 DIRAS3 (ENSTGUG00000028200) GNG12 (ENSTGUG00000020206) ENSTGUG00000021186 ENSTGUG00000010185 ENSTGUG00000024753 ENSTGUG00000027540 Common canary MODERN SPECIES 9 NAA20 (ENSSCAG00000008546) RABGGTB (ENSSCAG00000008538) ACADM (ENSSCAG00000008532) SLC44A5 (ENSSCAG00000008375) LHX8 (ENSSCAG00000008324) TYW3 (ENSSCAG00000008317) CRYZ (ENSSCAG00000008310) TNNI3K (ENSSCAG00000008178) FPGT (ENSSCAG00000008071) ENSSCAG00000008056 ENSSCAG00000008053 NEGR1 (ENSSCAG00000008047) ENSSCAG00000008038 ZRANB2 (ENSSCAG00000008035) #22 CTH (ENSSCAG00000007952) #25 ANKRD13C (ENSSCAG00000007923) ENSSCAG00000007914 SRSF11 (ENSSCAG00000007908) LRRC40 (ENSSCAG00000007651) LRRC7 (ENSSCAG00000007607) ENSSCAG00000007605 DEPDC1 (ENSSCAG00000007602) ENSSCAG00000007598 ENSSCAG00000007591 WLS (ENSSCAG00000007589) ENSSCAG00000007587 GNG12 (ENSSCAG00000007586) SERBP1 (ENSSCAG00000007585) ENSSCAG00000007581 Flycatcher MODERN SPECIES 27 ENSFALG00000009173 ACADM (ENSFALG00000009177) SLC44A5 (ENSFALG00000001184) LHX8 (ENSFALG00000001164) TYW3 (ENSFALG00000026876) CRYZ (ENSFALG00000001152) ENSFALG00000024574 TNNI3K (ENSFALG00000001130) FPGT (ENSFALG00000001123) ENSFALG00000023391 ENSFALG00000025815 ENSFALG00000026319 ENSFALG00000023525 NEGR1 (ENSFALG00000001249) ZRANB2 (ENSFALG00000001242) #22 ENSFALG00000023205 #25 LRRC7 (ENSFALG00000001237) LRRC40 (ENSFALG00000001226) SRSF11 (ENSFALG00000001217) ANKRD13C (ENSFALG00000028454) ENSFALG00000013034 #25 DEPDC1 (ENSFALG00000013009) RPE65 (ENSFALG00000012996) ENSFALG00000012976 WLS (ENSFALG00000012942) ENSFALG00000023313 GNG12 (ENSFALG00000012927) SERBP1 (ENSFALG00000028513) ENSFALG00000020272 SLC35D1 (ENSFALG00000012853) Australian saltwater crocodile MODERN SPECIES 28 SLC44A5 (ENSCPRG00005012997) LHX8 (ENSCPRG00005012986) TYW3 (ENSCPRG00005012970) CRYZ (ENSCPRG00005012967) ENSCPRG00005012963 TNNI3K (ENSCPRG00005012924) FPGT (ENSCPRG00005012901) ENSCPRG00005012898 ENSCPRG00005012892 NEGR1 (ENSCPRG00005012872) ZRANB2 (ENSCPRG00005012850) #22 PTGER3 (ENSCPRG00005012835) #23 CTH (ENSCPRG00005012796) #25 ANKRD13C (ENSCPRG00005012782) SRSF11 (ENSCPRG00005012756) LRRC40 (ENSCPRG00005012320) LRRC7 (ENSCPRG00005011919) DEPDC1 (ENSCPRG00005011831) RPE65 (ENSCPRG00005011721) ENSCPRG00005011710 WLS (ENSCPRG00005011645) ENSCPRG00005011639 ENSCPRG00005011633 ENSCPRG00005011630 GNG12 (ENSCPRG00005011605) GADD45A (ENSCPRG00005011603) Cryptodira ANCESTRAL SPECIES 8 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897.c ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897.c ENSGT00390000005897.d ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Emydidae ANCESTRAL SPECIES 22 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485.e ENSGT00940000166371 ENSGT00530000064485.f ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897.c ENSGT00390000005897.d ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 97 ENSTMTG00000016990 ENSTMTG00000017007 ENSTMTG00000017021 ENSTMTG00000017146 ENSTMTG00000017215 ENSTMTG00000017237 ENSTMTG00000017323 TYW3 (ENSTMTG00000017365) ENSTMTG00000017381 ENSTMTG00000017399 ENSTMTG00000017449 ENSTMTG00000017497 ENSTMTG00000017511 ENSTMTG00000017523 ENSTMTG00000017538 ENSTMTG00000017554 #22 ENSTMTG00000017584 #23 ENSTMTG00000017599 #25 ENSTMTG00000017623 ENSTMTG00000017697 ENSTMTG00000017719 ENSTMTG00000017770 ENSTMTG00000018021 ENSTMTG00000018043 ENSTMTG00000018066 ENSTMTG00000018084 ENSTMTG00000018147 ENSTMTG00000018157 ENSTMTG00000018159 ENSTMTG00000018165 ENSTMTG00000018169 Three-toed box turtle MODERN SPECIES 98 ENSTMTG00000008390 ENSTMTG00000008411 ENSTMTG00000008432 ENSTMTG00000008566 ENSTMTG00000008584 ENSTMTG00000008623 ENSTMTG00000008743 ENSTMTG00000008795 ENSTMTG00000008811 ENSTMTG00000008836 ENSTMTG00000008867 ENSTMTG00000008919 ENSTMTG00000008935 ENSTMTG00000008945 ENSTMTG00000008955 ENSTMTG00000008974 #22 ENSTMTG00000008993 #23 ENSTMTG00000009000 #25 ENSTMTG00000009038 SRSF11 (ENSTMTG00000009061) ENSTMTG00000009091 ENSTMTG00000009112 ENSTMTG00000009190 ENSTMTG00000009545 ENSTMTG00000009586 ENSTMTG00000009639 ENSTMTG00000009688 ENSTMTG00000009792 ENSTMTG00000009811 ENSTMTG00000009824 ENSTMTG00000009844 painted turtle MODERN SPECIES 807 ERICH3 (ENSCPBG00000022680) ENSCPBG00000022632 TNNI3K (ENSCPBG00000022569) FPGT (ENSCPBG00000022545) ENSCPBG00000022534 NEGR1 (ENSCPBG00000022521) ZRANB2 (ENSCPBG00000022504) #22 PTGER3 (ENSCPBG00000022486) #23 CTH (ENSCPBG00000022470) #25 ANKRD13C (ENSCPBG00000022457) SRSF11 (ENSCPBG00000022445) ENSCPBG00000022430 LRRC40 (ENSCPBG00000022398) ENSCPBG00000022391 LRRC7 (ENSCPBG00000022215) Testudinidae ANCESTRAL SPECIES 41 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00910000148470 ENSGT00730000110872.b.c.a ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897.c ENSGT00390000005897.d ENSGT01100000263497.E.b ENSGT00950000182964.a.a Goode s thornscrub tortoise MODERN SPECIES 22 PIGK (ENSGEVG00005015605) ST6GALNAC5 (ENSGEVG00005015628) ST6GALNAC3 (ENSGEVG00005015639) MSH4 (ENSGEVG00005015670) ENSGEVG00005016009 ENSGEVG00005004033 ACADM (ENSGEVG00005004108) SLC44A5 (ENSGEVG00005004282) TYW3 (ENSGEVG00005004607) CRYZ (ENSGEVG00005004636) ENSGEVG00005004660 ENSGEVG00005004683 FPGT (ENSGEVG00005004715) ENSGEVG00005004769 NEGR1 (ENSGEVG00005004829) ZRANB2 (ENSGEVG00005004867) #22 PTGER3 (ENSGEVG00005004891) #23 ENSGEVG00005004912 CTH (ENSGEVG00005004963) #25 ANKRD13C (ENSGEVG00005005082) SRSF11 (ENSGEVG00005005134) ENSGEVG00005005179 LRRC40 (ENSGEVG00005005209) LRRC7 (ENSGEVG00005005345) DEPDC1 (ENSGEVG00005005637) RPE65 (ENSGEVG00005005697) ENSGEVG00005005750 ENSGEVG00005005805 ENSGEVG00005005866 ENSGEVG00005005887 GNG12 (ENSGEVG00005005904) Abingdon island giant tortoise MODERN SPECIES 701 NEGR1 (ENSCABG00000021938) ZRANB2 (ENSCABG00000021937) #22 PTGER3 (ENSCABG00000021936) #23 Chinese turtle MODERN SPECIES 932 NEGR1 (ENSPSIG00000012142) ZRANB2 (ENSPSIG00000012222) #22 PTGER3 (ENSPSIG00000012271) #23 CTH (ENSPSIG00000013094) #25 Lepidosauria ANCESTRAL SPECIES 11 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897.g ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897.g ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00530000064198 Elapidae ANCESTRAL SPECIES 1 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897.g ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.q ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00940000162903.f.f.a ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 Elapidae_a ANCESTRAL SPECIES 7 ENSGT00940000156273 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897.g ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.q ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00940000162903.f.f.a ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00940000156968.g ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT00940000158196.`b.a ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Acanthophiinae ANCESTRAL SPECIES 5 ENSGT00940000156273 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897.g ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.q ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00940000162903.f.f.a ENSGT00950000182928.B.d.b ENSGT00730000110872.b.d ENSGT00940000156968.g ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT00940000158196.`b.a ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Eastern brown snake MODERN SPECIES 13 PIGK (ENSPTXG00000001564) ST6GALNAC5 (ENSPTXG00000001558) ST6GALNAC3 (ENSPTXG00000001556) MSH4 (ENSPTXG00000001552) RABGGTB (ENSPTXG00000001543) ACADM (ENSPTXG00000001540) SLC44A5 (ENSPTXG00000000227) LHX8 (ENSPTXG00000000088) TYW3 (ENSPTXG00000006516) CRYZ (ENSPTXG00000006515) ENSPTXG00000006514 TNNI3K (ENSPTXG00000006513) FPGT (ENSPTXG00000006512) ENSPTXG00000006511 NEGR1 (ENSPTXG00000006509) ZRANB2 (ENSPTXG00000006508) #22 PTGER3 (ENSPTXG00000006507) #23 CTH (ENSPTXG00000006506) #25 ENSPTXG00000006504 ANKRD13C (ENSPTXG00000006503) SRSF11 (ENSPTXG00000006502) ENSPTXG00000006501 LRRC7 (ENSPTXG00000006477) DEPDC1 (ENSPTXG00000006476) RPE65 (ENSPTXG00000006475) ENSPTXG00000006474 WLS (ENSPTXG00000006473) ENSPTXG00000006472 GNG12 (ENSPTXG00000006471) GADD45A (ENSPTXG00000006470) SERBP1 (ENSPTXG00000006469) Mainland tiger snake MODERN SPECIES 114 ST6GALNAC3 (ENSNSUG00000007599) MSH4 (ENSNSUG00000007600) ENSNSUG00000007604 ENSNSUG00000007606 ACADM (ENSNSUG00000007609) SLC44A5 (ENSNSUG00000007610) LHX8 (ENSNSUG00000008114) TYW3 (ENSNSUG00000008115) CRYZ (ENSNSUG00000008116) TNNI3K (ENSNSUG00000008120) ENSNSUG00000008123 ENSNSUG00000008125 ENSNSUG00000008126 ENSNSUG00000008127 NEGR1 (ENSNSUG00000008128) ZRANB2 (ENSNSUG00000008204) #22 PTGER3 (ENSNSUG00000008206) #23 CTH (ENSNSUG00000008208) #25 ANKRD13C (ENSNSUG00000008210) SRSF11 (ENSNSUG00000008233) Blue-lipped sea krait MODERN SPECIES 3164 ZRANB2 (ENSLLTG00000005235) #22 PTGER3 (ENSLLTG00000005259) #23 Indian cobra MODERN SPECIES 2 ST6GALNAC3 (ENSNNAG00000001135) MSH4 (ENSNNAG00000001084) RABGGTB (ENSNNAG00000001037) ACADM (ENSNNAG00000001011) SLC44A5 (ENSNNAG00000000960) LHX8 (ENSNNAG00000000937) TYW3 (ENSNNAG00000000928) CRYZ (ENSNNAG00000000906) ENSNNAG00000000887 ENSNNAG00000000872 TNNI3K (ENSNNAG00000000837) ENSNNAG00000000815 ENSNNAG00000000805 ENSNNAG00000000794 NEGR1 (ENSNNAG00000000786) ZRANB2 (ENSNNAG00000000772) #22 PTGER3 (ENSNNAG00000000759) #23 ENSNNAG00000000739 CTH (ENSNNAG00000000711) #25 ENSNNAG00000000687 ANKRD13C (ENSNNAG00000018083) SRSF11 (ENSNNAG00000018081) LRRC40 (ENSNNAG00000018063) LRRC7 (ENSNNAG00000017992) DEPDC1 (ENSNNAG00000017965) RPE65 (ENSNNAG00000017920) ENSNNAG00000017913 WLS (ENSNNAG00000017910) ENSNNAG00000017909 GNG12 (ENSNNAG00000017908) GADD45A (ENSNNAG00000017907) Lizard MODERN SPECIES 808 TNNI3K (ENSACAG00000011525) FPGT (ENSACAG00000027860) ENSACAG00000045574 ENSACAG00000028996 LRRIQ3 (ENSACAG00000028360) ENSACAG00000035177 ENSACAG00000038896 ENSACAG00000037212 ENSACAG00000036785 ENSACAG00000042436 ENSACAG00000043754 ENSACAG00000040962 NEGR1 (ENSACAG00000004220) ENSACAG00000000517 ENSACAG00000028841 ZRANB2 (ENSACAG00000004293) #22 PTGER3 (ENSACAG00000038385) #23 Laterata ANCESTRAL SPECIES 3 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897.g ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.c ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a.e ENSGT00940000159829 ENSGT00530000064198 Common wall lizard MODERN SPECIES 14 ENSPMRG00000010145 RABGGTB (ENSPMRG00000010149) ACADM (ENSPMRG00000010163) ENSPMRG00000010171 SLC44A5 (ENSPMRG00000010178) LHX8 (ENSPMRG00000010186) TYW3 (ENSPMRG00000010188) CRYZ (ENSPMRG00000010195) ENSPMRG00000010206 ENSPMRG00000010214 ENSPMRG00000010215 FPGT (ENSPMRG00000010219) LRRIQ3 (ENSPMRG00000010225) NEGR1 (ENSPMRG00000010238) ENSPMRG00000010246 ZRANB2 (ENSPMRG00000010249) #22 PTGER3 (ENSPMRG00000010253) #23 CTH (ENSPMRG00000010257) #25 ANKRD13C (ENSPMRG00000010264) SRSF11 (ENSPMRG00000010271) LRRC40 (ENSPMRG00000010276) LRRC7 (ENSPMRG00000010305) RPE65 (ENSPMRG00000010368) ENSPMRG00000010374 WLS (ENSPMRG00000010394) ENSPMRG00000010420 GNG12 (ENSPMRG00000010424) GADD45A (ENSPMRG00000010434) SERBP1 (ENSPMRG00000010448) ENSPMRG00000010456 ENSPMRG00000010463 Argentine black and white tegu MODERN SPECIES 31 ENSSMRG00000020184 ST6GALNAC3 (ENSSMRG00000020182) MSH4 (ENSSMRG00000020179) RABGGTB (ENSSMRG00000020172) ACADM (ENSSMRG00000020171) SLC44A5 (ENSSMRG00000020166) LHX8 (ENSSMRG00000020162) TYW3 (ENSSMRG00000020160) CRYZ (ENSSMRG00000020158) ENSSMRG00000020155 ENSSMRG00000020153 TNNI3K (ENSSMRG00000020151) FPGT (ENSSMRG00000020149) ENSSMRG00000020147 NEGR1 (ENSSMRG00000020096) ZRANB2 (ENSSMRG00000020094) #22 PTGER3 (ENSSMRG00000020093) #23 CTH (ENSSMRG00000020092) #25 ANKRD13C (ENSSMRG00000020091) SRSF11 (ENSSMRG00000020090) LRRC40 (ENSSMRG00000020088) LRRC7 (ENSSMRG00000020087) DEPDC1 (ENSSMRG00000020085) RPE65 (ENSSMRG00000019976) ENSSMRG00000019975 WLS (ENSSMRG00000019974) ENSSMRG00000019973 GNG12 (ENSSMRG00000019972) GADD45A (ENSSMRG00000019971) ENSSMRG00000019970 ENSSMRG00000019969 Anura ANCESTRAL SPECIES 17 ENSGT00940000156273 ENSGT00940000157634 ENSGT00940000159735 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000159131 ENSGT00780000122095.i ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a ENSGT00940000159829 ENSGT00940000155665 Leishan spiny toad MODERN SPECIES 11 ACADM (ENSLLEG00000029026) SLC44A5 (ENSLLEG00000028564) LHX8 (ENSLLEG00000028451) ENSLLEG00000028427 TYW3 (ENSLLEG00000028400) CRYZ (ENSLLEG00000028367) ENSLLEG00000028349 ENSLLEG00000027987 TNNI3K (ENSLLEG00000027700) ENSLLEG00000027582 ENSLLEG00000027544 ENSLLEG00000027523 ENSLLEG00000027507 NEGR1 (ENSLLEG00000027422) ENSLLEG00000027406 ZRANB2 (ENSLLEG00000027360) #22 PTGER3 (ENSLLEG00000027330) #23 ENSLLEG00000027312 ENSLLEG00000027303 ENSLLEG00000027274 CTH (ENSLLEG00000026852) #25 ENSLLEG00000026788 ENSLLEG00000026691 SRSF11 (ENSLLEG00000026455) LRRC40 (ENSLLEG00000026326) LRRC7 (ENSLLEG00000025641) DEPDC1 (ENSLLEG00000025409) RPE65 (ENSLLEG00000024253) ENSLLEG00000023950 WLS (ENSLLEG00000023556) ENSLLEG00000023508 Frog MODERN SPECIES 4 st6galnac5 (ENSXETG00000002971) ENSXETG00000048280 st6galnac3 (ENSXETG00000002975) rabggtb (ENSXETG00000002979) acadm (ENSXETG00000002983) slc44a5 (ENSXETG00000002987) lhx8 (ENSXETG00000002992) tyw3 (ENSXETG00000002996) cryz (ENSXETG00000002997) erich3 (ENSXETG00000002998) tnni3k (ENSXETG00000024099) ENSXETG00000040343 ENSXETG00000036702 lrriq3 (ENSXETG00000037102) negr1 (ENSXETG00000024105) zranb2 (ENSXETG00000024108) #22 ptger3 (ENSXETG00000011179) #23 cth (ENSXETG00000011183) #25 ankrd13c (ENSXETG00000009602) srsf11 (ENSXETG00000012371) lrrc40 (ENSXETG00000012372) lrrc7 (ENSXETG00000012373) depdc1 (ENSXETG00000012376) rpe65 (ENSXETG00000012377) XB5906919 [provisional:mccc2] (ENSXETG00000012378) ENSXETG00000045331 wls (ENSXETG00000012387) diras3 (ENSXETG00000012389) gng12 (ENSXETG00000045302) gadd45a (ENSXETG00000012392) serbp1 (ENSXETG00000012394) Coelacanth MODERN SPECIES 3118 ZRANB2 (ENSLACG00000005241) #22 PTGER3 (ENSLACG00000003866) #23 Actinopterygii ANCESTRAL SPECIES 258 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00510000047658 ENSGT00510000048142 Neopterygii ANCESTRAL SPECIES 9 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00390000004692.d.b ENSGT00940000159078 ENSGT00940000156348.C ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000161527 ENSGT00390000011196 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b Osteoglossocephalai ANCESTRAL SPECIES 140 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 ENSGT00510000047658 Osteoglossiformes ANCESTRAL SPECIES 534 ENSGT00940000159289.i ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 Asian bonytongue MODERN SPECIES 24 ADGRL2 (ENSSFOG00015021664) ttll7 (ENSSFOG00015021593) ENSSFOG00015025219 samd13 (ENSSFOG00015031748) uox (ENSSFOG00015021531) DNASE2B (ENSSFOG00015021519) rpf1 (ENSSFOG00015021492) ctbs (ENSSFOG00015028122) ENSSFOG00015027737 ENSSFOG00015016838 ENSSFOG00015024937 ENSSFOG00015028302 ENSSFOG00015014720 ENSSFOG00015029684 negr1 (ENSSFOG00015014749) zranb2 (ENSSFOG00015014775) #22 PTGER3 (ENSSFOG00015014795) #23 cthl (ENSSFOG00015014815) #25 ankrd13c (ENSSFOG00015014850) srsf11 (ENSSFOG00015027370) lrrc40 (ENSSFOG00015014904) LRRC7 (ENSSFOG00015014990) depdc1a (ENSSFOG00015015357) rpe65b (ENSSFOG00015015412) si:ch211-198n5.11 (ENSSFOG00015015467) fnbp1l (ENSSFOG00015015513) bcar3 (ENSSFOG00015015564) paox1 (ENSSFOG00015015650) slc5a9 (ENSSFOG00015015681) gclm (ENSSFOG00015015714) dnttip2 (ENSSFOG00015015734) P. kingsleyae MODERN SPECIES 356 negr1 (ENSPKIG00000021762) zranb2 (ENSPKIG00000021734) #22 PTGER3 (ENSPKIG00000021722) #23 ENSPKIG00000021714 cthl (ENSPKIG00000021646) #25 ankrd13c (ENSPKIG00000021611) srsf11 (ENSPKIG00000021584) ENSPKIG00000021576 lrrc40 (ENSPKIG00000021522) ENSPKIG00000021485 LRRC7 (ENSPKIG00000021328) Clupeocephala ANCESTRAL SPECIES 103 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 ENSGT00510000047658 Otomorpha ANCESTRAL SPECIES 53 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT01030000235287 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000156968 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 ENSGT00510000047658 Clupeiformes ANCESTRAL SPECIES 111 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00940000153229.B ENSGT00390000002634.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT01030000235287 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 ENSGT00510000047658 ENSGT00510000048142 Denticle herring MODERN SPECIES 4 ENSDCDG00000028847 ENSDCDG00000028867 ctbs (ENSDCDG00000029026) rpf1 (ENSDCDG00000029035) ENSDCDG00000029197 DNASE2B (ENSDCDG00000029199) uox (ENSDCDG00000029202) ENSDCDG00000029207 ttll7 (ENSDCDG00000029661) ADGRL2 (ENSDCDG00000029791) ENSDCDG00000033766 adgrl4 (ENSDCDG00000033788) vtg3 (ENSDCDG00000033876) vtg3 (ENSDCDG00000034550) negr1 (ENSDCDG00000034960) zranb2 (ENSDCDG00000034966) #22 PTGER3 (ENSDCDG00000034969) #23 cthl (ENSDCDG00000034987) #25 ankrd13c (ENSDCDG00000003135) srsf11 (ENSDCDG00000003231) lrrc40 (ENSDCDG00000003268) LRRC7 (ENSDCDG00000003363) depdc1a (ENSDCDG00000003571) rpe65c (ENSDCDG00000003616) si:ch211-198n5.11 (ENSDCDG00000003959) fnbp1l (ENSDCDG00000004000) bcar3 (ENSDCDG00000004556) paox1 (ENSDCDG00000004570) zgc:171480 (ENSDCDG00000004575) slc5a9 (ENSDCDG00000004636) gclm (ENSDCDG00000005066) Atlantic herring MODERN SPECIES 1 ENSCHAG00000025245 ENSCHAG00000025234 ENSCHAG00000025229 ENSCHAG00000025224 ENSCHAG00000025202 ENSCHAG00000024249 ENSCHAG00000023364 ENSCHAG00000023292 ENSCHAG00000021549 ENSCHAG00000021491 ENSCHAG00000021484 ADGRL2 (ENSCHAG00000015107) adgrl4 (ENSCHAG00000014849) vtg3 (ENSCHAG00000012438) negr1 (ENSCHAG00000012385) zranb2 (ENSCHAG00000012367) #22 PTGER3 (ENSCHAG00000012359) #23 ankrd13c (ENSCHAG00000012050) LRRC7 (ENSCHAG00000011575) depdc1a (ENSCHAG00000011503) rpe65b (ENSCHAG00000010933) si:ch211-198n5.11 (ENSCHAG00000010738) fnbp1l (ENSCHAG00000010108) bcar3 (ENSCHAG00000009829) paox1 (ENSCHAG00000009791) zgc:171480 (ENSCHAG00000009784) slc5a9 (ENSCHAG00000009121) gclm (ENSCHAG00000009037) ENSCHAG00000009014 spata6 (ENSCHAG00000008998) AGBL4 (ENSCHAG00000008915) Otophysi ANCESTRAL SPECIES 6 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000164427.a.b ENSGT00940000162953 ENSGT00940000159619.a ENSGT00550000074851 ENSGT01030000234818 ENSGT00940000155530 ENSGT00390000018525.a.b.e.b ENSGT00940000159402 ENSGT00940000164855 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00550000074838 ENSGT00390000001397 ENSGT00940000166880 ENSGT00940000165420 ENSGT00940000158722 ENSGT00940000158262 ENSGT00940000153460.c.a ENSGT00940000162231 ENSGT00940000155962 ENSGT00500000044831.a.b ENSGT00940000165545 ENSGT00940000155651 ENSGT00940000159067 Characiphysae ANCESTRAL SPECIES 2 ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000164427.a.b ENSGT00940000162953 ENSGT00940000159619.a ENSGT00550000074851 ENSGT01030000234818 ENSGT00940000155530 ENSGT00390000018525.a.b.e.b ENSGT00940000159402 ENSGT00940000164855 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00550000074838 ENSGT00390000001397 ENSGT00940000166880 ENSGT00940000165420 ENSGT00940000158722.x ENSGT00940000158262 ENSGT00940000153460.c.a ENSGT00940000162231 ENSGT00940000155962 ENSGT00500000044831.a.b ENSGT00940000165545 ENSGT00940000155651 ENSGT00940000159067 Characiphysae_b ANCESTRAL SPECIES ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000164427.a.b ENSGT00940000162953 ENSGT00940000159619.a ENSGT00550000074851 ENSGT01030000234818 ENSGT00940000155530 ENSGT00390000018525.a.b.e.b ENSGT00940000159402 ENSGT00940000164855 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00550000074838 ENSGT00390000001397 ENSGT00940000166880 ENSGT00940000165420 ENSGT00940000158722.x ENSGT00940000158262 ENSGT00940000153460.c.a ENSGT00940000162231 ENSGT00940000155962 ENSGT00500000044831.a.b ENSGT00940000165545 ENSGT00940000155651 ENSGT00940000159067 Characoidei ANCESTRAL SPECIES ENSGT00940000157380 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00940000164427.a.b ENSGT00940000162953 ENSGT00940000159619.a ENSGT00550000074851 ENSGT00530000067036.a ENSGT00940000155530 ENSGT00390000018525.a.b.e.b ENSGT00940000159402 ENSGT00940000164855 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00550000074838 ENSGT00390000001397 ENSGT00940000166880 ENSGT00940000165420 ENSGT00940000158722.x ENSGT00940000158262 ENSGT00940000153460.c.a ENSGT00940000162231 ENSGT00940000155962 ENSGT00940000165545 ENSGT00500000044831.a.b ENSGT00940000155651 ENSGT00940000159067 Red-bellied piranha MODERN SPECIES 9 rgs16 (ENSPNAG00000011410) rgs8 (ENSPNAG00000011427) brinp3a.1 (ENSPNAG00000011442) brinp3a.2 (ENSPNAG00000011469) ENSPNAG00000011472 ENSPNAG00000001769 ENSPNAG00000011516 her6 (ENSPNAG00000011552) opa1 (ENSPNAG00000001917) ENSPNAG00000006993 tmem45a (ENSPNAG00000011800) sft2d2a (ENSPNAG00000011822) chd1l (ENSPNAG00000011881) ENSPNAG00000002001 negr1 (ENSPNAG00000011977) zranb2 (ENSPNAG00000012001) #22 PTGER3 (ENSPNAG00000012020) #23 cthl (ENSPNAG00000012047) #25 nit2 (ENSPNAG00000012085) GTPBP6 (ENSPNAG00000002094) ENSPNAG00000012115 ENSPNAG00000012131 jade3 (ENSPNAG00000002125) rp2 (ENSPNAG00000002142) slc9a7 (ENSPNAG00000012243) CHST7 (ENSPNAG00000012249) tubgcp5 (ENSPNAG00000012334) ENSPNAG00000012350 cyfip1 (ENSPNAG00000012434) nipa2 (ENSPNAG00000004709) nipa1 (ENSPNAG00000012489) Electric eel MODERN SPECIES 31 rgs5a (ENSEEEG00000007076) rgs16 (ENSEEEG00000007075) rgs8 (ENSEEEG00000007073) brinp3a.1 (ENSEEEG00000007072) brinp3a.2 (ENSEEEG00000007070) GP5 (ENSEEEG00000007069) ENSEEEG00000007066 her6 (ENSEEEG00000007061) opa1 (ENSEEEG00000005403) ENSEEEG00000005345 tmem45a (ENSEEEG00000005344) sft2d2a (ENSEEEG00000005341) chd1l (ENSEEEG00000005270) ENSEEEG00000005264 negr1 (ENSEEEG00000005262) zranb2 (ENSEEEG00000005261) #22 PTGER3 (ENSEEEG00000005259) #23 cthl (ENSEEEG00000005093) #25 nit2 (ENSEEEG00000005080) GTPBP6 (ENSEEEG00000005053) ENSEEEG00000005046 ENSEEEG00000005045 Channel catfish MODERN SPECIES 2 ghrl (ENSIPUG00000022801) vhl (ENSIPUG00000022798) crbn (ENSIPUG00000022774) ENSIPUG00000022772 ENSIPUG00000022754 dmbx1b (ENSIPUG00000022749) ENSIPUG00000022747 hes1 (ENSIPUG00000022742) opa1 (ENSIPUG00000022672) ENSIPUG00000022661 tmem45a (ENSIPUG00000022656) SFT2D2 (ENSIPUG00000022648) chd1l (ENSIPUG00000022617) ENSIPUG00000022605 negr1 (ENSIPUG00000022594) zranb2 (ENSIPUG00000022583) #22 ptger3 (ENSIPUG00000022578) #23 cth (ENSIPUG00000022558) #25 nit2 (ENSIPUG00000022547) gtpbp6 (ENSIPUG00000022531) ENSIPUG00000022526 PLCXD1 (ENSIPUG00000022512) ENSIPUG00000022504 jade3 (ENSIPUG00000022480) rp2 (ENSIPUG00000022470) slc9a7 (ENSIPUG00000022442) CHST7 (ENSIPUG00000022436) tubgcp5 (ENSIPUG00000022415) cyfip1 (ENSIPUG00000022348) nipa2 (ENSIPUG00000022332) nipa1 (ENSIPUG00000022326) Cyprinoidei ANCESTRAL SPECIES 2 ENSGT00940000164081.b ENSGT00940000154304.C ENSGT00940000165058.a ENSGT00940000156099 ENSGT00950000182844.b.b.b.a.a.j ENSGT00940000164427.a.b ENSGT00940000162953 ENSGT00940000159619.a ENSGT00550000074851 ENSGT01030000234818 ENSGT00940000155530 ENSGT00390000018525.a.b.e.b ENSGT00940000159402 ENSGT00940000164855 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00550000074838 ENSGT00390000001397 ENSGT00940000166880 ENSGT00940000165420 ENSGT00940000158722 ENSGT00940000158262 ENSGT00940000153460.c.a ENSGT00940000162231 ENSGT00940000155962 ENSGT00500000044831.a.b ENSGT00940000165545 ENSGT00940000155651 ENSGT00940000159067 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 12 ENSGT00940000164081.b.a ENSGT00940000154304.C.d.a ENSGT00940000165058.a.a ENSGT00940000156099.c ENSGT00950000182844.b.b.b.a.a.j.b ENSGT00940000162953.u.a ENSGT00940000164427.a.b ENSGT00940000162953.u.b ENSGT00940000159619.a.g ENSGT00550000074851.b ENSGT01030000234818.b ENSGT00940000155530.a ENSGT00940000159402.g ENSGT00940000164855.e.b ENSGT00940000159289.a ENSGT00730000111078.a #22 ENSGT01030000234559.b.m #23 ENSGT00390000000312.e.a #25 ENSGT00550000074838.m ENSGT00390000001397.a ENSGT00940000166880.b ENSGT00940000165420.g.b ENSGT00940000158722.u ENSGT00940000158262.m ENSGT00940000153460.c.a.e ENSGT00940000162231.f ENSGT00940000155962.x ENSGT00500000044831.a.b.i ENSGT00940000165545.e ENSGT00940000155651.j.b Goldfish MODERN SPECIES 46 rgs16 (ENSCARG00000029822) rgs8 (ENSCARG00000029837) brinp3a.1 (ENSCARG00000029850) brinp3a.2 (ENSCARG00000029857) rhcgl1 (ENSCARG00000029900) ENSCARG00000031009 ENSCARG00000031013 her6 (ENSCARG00000031026) opa1 (ENSCARG00000031305) ENSCARG00000040150 tmem45a (ENSCARG00000040162) chd1l (ENSCARG00000040322) ENSCARG00000044252 negr1 (ENSCARG00000044266) ENSCARG00000044364 zranb2 (ENSCARG00000044378) #22 PTGER3 (ENSCARG00000000171) #23 CTH (ENSCARG00000000410) #25 ENSCARG00000000627 CTH (ENSCARG00000000639) #25 nit2 (ENSCARG00000000707) GTPBP6 (ENSCARG00000000868) ENSCARG00000000903 ENSCARG00000000916 jade3 (ENSCARG00000000933) rp2 (ENSCARG00000000948) slc9a7 (ENSCARG00000001047) CHST7 (ENSCARG00000001344) tubgcp5 (ENSCARG00000001370) cyfip1 (ENSCARG00000001456) ENSCARG00000001508 Cyprininae_a ANCESTRAL SPECIES 23 ENSGT00940000157380.a ENSGT00940000164081.b.a ENSGT00940000154304.C.d.a ENSGT00940000165058.a.a.a ENSGT00940000156099.c ENSGT00950000182844.b.b.b.a.a.j.b ENSGT00940000164427.a.b.g ENSGT00940000162953.u.b ENSGT00940000159619.a.g ENSGT00550000074851.b ENSGT01030000234818.b ENSGT00940000155530.a ENSGT00940000159402.g ENSGT00940000164855.e.b ENSGT00940000159289.a ENSGT00730000111078.a #22 ENSGT01030000234559.b.m #23 ENSGT00390000000312.e.a #25 ENSGT00550000074838.m ENSGT00390000001397.a ENSGT00940000166880.b ENSGT00940000165420.g.b ENSGT00940000158722.u ENSGT00940000158262.m ENSGT00940000153460.c.a.e ENSGT00940000162231.f ENSGT00940000155962.x ENSGT00500000044831.a.b.i ENSGT00940000165545.e ENSGT00940000155651.j.b Golden-line barbel MODERN SPECIES 66 brinp3a.1 (ENSSGRG00000014178) brinp3a.2 (ENSSGRG00000014177) rhcgl1 (ENSSGRG00000014176) ENSSGRG00000014175 her6 (ENSSGRG00000014173) opa1 (ENSSGRG00000014103) ENSSGRG00000014101 tmem45a (ENSSGRG00000014100) sft2d2a (ENSSGRG00000014099) chd1l (ENSSGRG00000013915) ENSSGRG00000013906 negr1 (ENSSGRG00000013905) zranb2 (ENSSGRG00000013904) #22 PTGER3 (ENSSGRG00000013903) #23 ENSSGRG00000013902 CTH (ENSSGRG00000013228) #25 nit2 (ENSSGRG00000012702) GTPBP6 (ENSSGRG00000012685) ENSSGRG00000012684 ENSSGRG00000012683 ENSSGRG00000012682 jade3 (ENSSGRG00000012680) rp2 (ENSSGRG00000012642) ENSSGRG00000012641 slc9a7 (ENSSGRG00000012639) CHST7 (ENSSGRG00000012637) tubgcp5 (ENSSGRG00000012629) ENSSGRG00000012628 Common carp reference DUPLICATION Common carp reference MODERN SPECIES 10 brinp3a.2 (ENSCCRG00000073021) rhcgl1 (ENSCCRG00000029442) ENSCCRG00000040696 ENSCCRG00000065404 ENSCCRG00000064817 ENSCCRG00000061531 her6 (ENSCCRG00000080154) opa1 (ENSCCRG00000008910) ENSCCRG00000045419 ENSCCRG00000073331 tmem45a (ENSCCRG00000009189) ENSCCRG00000070163 chd1l (ENSCCRG00000057558) chd1l (ENSCCRG00000009230) negr1 (ENSCCRG00000052204) zranb2 (ENSCCRG00000055332) #22 PTGER3 (ENSCCRG00000082322) #23 ENSCCRG00000016446 CTH (ENSCCRG00000002598) #25 ENSCCRG00000002610 nit2 (ENSCCRG00000002651) ENSCCRG00000062357 ENSCCRG00000079938 ENSCCRG00000025666 jade3 (ENSCCRG00000025568) slc9a7 (ENSCCRG00000044453) CHST7 (ENSCCRG00000074968) tubgcp5 (ENSCCRG00000000848) ENSCCRG00000052986 cyfip1 (ENSCCRG00000000877) nipa2 (ENSCCRG00000001030) Common carp reference MODERN SPECIES 16 ENSCCRG00000079990 ENSCCRG00000073142 brinp3a.2 (ENSCCRG00000028787) ENSCCRG00000071493 rhcgl1 (ENSCCRG00000040745) ENSCCRG00000074428 ENSCCRG00000004681 ENSCCRG00000077764 her6 (ENSCCRG00000031287) opa1 (ENSCCRG00000020337) tmem45a (ENSCCRG00000045416) sft2d2a (ENSCCRG00000045411) ENSCCRG00000045408 ENSCCRG00000045405 negr1 (ENSCCRG00000062011) zranb2 (ENSCCRG00000062585) #22 PTGER3 (ENSCCRG00000056182) #23 CTH (ENSCCRG00000074461) #25 nit2 (ENSCCRG00000061395) ENSCCRG00000001311 ENSCCRG00000070724 jade3 (ENSCCRG00000045192) rp2 (ENSCCRG00000082403) slc9a7 (ENSCCRG00000058499) CHST7 (ENSCCRG00000027625) tubgcp5 (ENSCCRG00000045823) cyfip1 (ENSCCRG00000000971) ENSCCRG00000064095 nipa2 (ENSCCRG00000075202) nipa1 (ENSCCRG00000001039) HERC2 (ENSCCRG00000001082) Cyprininae ANCESTRAL SPECIES 131 ENSGT00940000159036.c ENSGT00940000157380.b ENSGT00940000164081.b.b ENSGT00940000154304.C.d.b ENSGT00940000165058.a.b ENSGT00940000156099.d ENSGT00950000182844.b.b.b.a.a.j.a ENSGT00940000159619.a.h ENSGT00550000074851.a ENSGT01030000234818.a ENSGT00940000155530.b ENSGT00390000018525.a.b.e.b ENSGT00940000159402.h ENSGT00940000164855.e.a ENSGT00940000159289.b ENSGT00730000111078.b #22 ENSGT01030000234559.b.n #23 ENSGT00390000000312.e.b #25 ENSGT00550000074838.n ENSGT00390000001397.b ENSGT00940000166880.a ENSGT00940000165420.g.a ENSGT00940000158722.v ENSGT00940000158262.n ENSGT00940000153460.c.a.f ENSGT00940000162231.e ENSGT00940000155962.w ENSGT00500000044831.a.b.j ENSGT00940000165545.f ENSGT00940000155651.j.a ENSGT00940000159067.o Cyprininae_a ANCESTRAL SPECIES 10 ENSGT00940000164081.b.b ENSGT00940000154304.C.d.b ENSGT00940000165058.a.b ENSGT00940000156099.d ENSGT00950000182844.b.b.b.a.a.j.a ENSGT00940000164427.a.b.h ENSGT00940000162953.u.a ENSGT00940000159619.a.h ENSGT00550000074851.a ENSGT01030000234818.a ENSGT00940000155530.b ENSGT00390000018525.a.b.e.b ENSGT00940000159402.h ENSGT00940000164855.e.a ENSGT00940000159289.b ENSGT00730000111078.b #22 ENSGT01030000234559.b.n #23 ENSGT00390000000312.e.b #25 ENSGT00650000094740 ENSGT00550000074838.n ENSGT00390000001397.b ENSGT00940000166880.a ENSGT00940000165420.g.a ENSGT00940000158722.v ENSGT00940000158262.n ENSGT00940000153460.c.a.f ENSGT00940000162231.e ENSGT00940000155962.w ENSGT00500000044831.a.b.j ENSGT00940000165545.f ENSGT00940000155651.j.a Golden-line barbel MODERN SPECIES 46 psme3 (ENSSGRG00000040553) nbr1a (ENSSGRG00000040549) tmem106a (ENSSGRG00000040547) ENSSGRG00000040538 SOST (ENSSGRG00000040536) brinp3a.2 (ENSSGRG00000040532) rhcgl1 (ENSSGRG00000040529) ENSSGRG00000040521 her6 (ENSSGRG00000040513) opa1 (ENSSGRG00000039882) ENSSGRG00000039869 tmem45a (ENSSGRG00000039868) chd1l (ENSSGRG00000039867) ENSSGRG00000039865 negr1 (ENSSGRG00000039864) zranb2 (ENSSGRG00000039863) #22 PTGER3 (ENSSGRG00000039862) #23 ENSSGRG00000039861 CTH (ENSSGRG00000039706) #25 ENSSGRG00000039695 nit2 (ENSSGRG00000039439) GTPBP6 (ENSSGRG00000039411) ENSSGRG00000039407 ENSSGRG00000039403 jade3 (ENSSGRG00000039295) rp2 (ENSSGRG00000039294) slc9a7 (ENSSGRG00000039293) CHST7 (ENSSGRG00000039292) tubgcp5 (ENSSGRG00000039215) cyfip1 (ENSSGRG00000036665) nipa2 (ENSSGRG00000036611) Goldfish MODERN SPECIES 24 angptl3 (ENSCARG00000049322) DOCK7 (ENSCARG00000029753) usp1 (ENSCARG00000029211) KANK4 (ENSCARG00000029194) ENSCARG00000029184 brinp3a.2 (ENSCARG00000029175) ENSCARG00000029168 ENSCARG00000029162 ENSCARG00000029148 her6 (ENSCARG00000029102) opa1 (ENSCARG00000024716) ENSCARG00000024561 tmem45a (ENSCARG00000024543) sft2d2a (ENSCARG00000021942) negr1 (ENSCARG00000021919) zranb2 (ENSCARG00000021882) #22 PTGER3 (ENSCARG00000021866) #23 CTH (ENSCARG00000021696) #25 nit2 (ENSCARG00000020804) ENSCARG00000020726 jade3 (ENSCARG00000020646) rp2 (ENSCARG00000020631) slc9a7 (ENSCARG00000020063) CHST7 (ENSCARG00000020035) ENSCARG00000019885 cyfip1 (ENSCARG00000019726) nipa2 (ENSCARG00000019694) nipa1 (ENSCARG00000019680) ENSCARG00000019677 OCA2 (ENSCARG00000018536) ENSCARG00000018271 Zebrafish MODERN SPECIES 21 rgs5a (ENSDARG00000002644) rgs16 (ENSDARG00000040177) rgs8 (ENSDARG00000070037) brinp3a.1 (ENSDARG00000076351) brinp3a.2 (ENSDARG00000061051) rhcgl1 (ENSDARG00000007080) lrrc15 (ENSDARG00000070792) her6 (ENSDARG00000006514) opa1 (ENSDARG00000070801) ENSDARG00000100255 tmem45a (ENSDARG00000070743) sft2d2a (ENSDARG00000070746) chd1l (ENSDARG00000015471) ENSDARG00000091734 negr1 (ENSDARG00000021607) zranb2 (ENSDARG00000044332) #22 PTGER3 (ENSDARG00000055781) #23 cthl (ENSDARG00000032206) #25 cth (ENSDARG00000074301) #25 nit2 (ENSDARG00000017590) GTPBP6 (ENSDARG00000061091) ENSDARG00000091465 ENSDARG00000088798 jade3 (ENSDARG00000019614) rp2 (ENSDARG00000044339) slc9a7 (ENSDARG00000076754) CHST7 (ENSDARG00000044341) tubgcp5 (ENSDARG00000077442) cyfip1 (ENSDARG00000044345) nipa2 (ENSDARG00000055912) nipa1 (ENSDARG00000055917) Euteleosteomorpha ANCESTRAL SPECIES 71 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000162953 ENSGT00940000164427.a.b ENSGT00940000161826.A Acanthomorphata ANCESTRAL SPECIES 54 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b Percomorphaceae ANCESTRAL SPECIES 12 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b Tiger tail seahorse MODERN SPECIES 292 ctbs (ENSHCOG00000017636) SPATA1 (ENSHCOG00000017612) rpf1 (ENSHCOG00000017548) ENSHCOG00000017524 DNASE2B (ENSHCOG00000017517) uox (ENSHCOG00000017513) samd13 (ENSHCOG00000017487) prkacbb (ENSHCOG00000017468) ttll7 (ENSHCOG00000017443) ADGRL2 (ENSHCOG00000017200) ENSHCOG00000017167 adgrl4 (ENSHCOG00000017154) vtg3 (ENSHCOG00000017143) negr1 (ENSHCOG00000017102) HYKK (ENSHCOG00000017090) zranb2 (ENSHCOG00000017021) #22 PTGER3 (ENSHCOG00000016955) #23 PTGER3 (ENSHCOG00000016945) #23 cthl (ENSHCOG00000016935) #25 ankrd13c (ENSHCOG00000016909) ENSHCOG00000016860 XXYLT1 (ENSHCOG00000016857) fam43a (ENSHCOG00000016853) lsg1 (ENSHCOG00000016848) tmem44 (ENSHCOG00000016819) ATP13A3 (ENSHCOG00000016791) opa1 (ENSHCOG00000016756) Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A Eupercaria ANCESTRAL SPECIES 8 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b Ballan wrasse MODERN SPECIES 128 ADGRL2 (ENSLBEG00000023838) adgrl4 (ENSLBEG00000023885) vtg3 (ENSLBEG00000023932) negr1 (ENSLBEG00000024006) zranb2 (ENSLBEG00000024043) #22 PTGER3 (ENSLBEG00000024066) #23 cthl (ENSLBEG00000024088) #25 ankrd13c (ENSLBEG00000024124) srsf11 (ENSLBEG00000024167) XXYLT1 (ENSLBEG00000024208) fam43a (ENSLBEG00000024228) ENSLBEG00000024237 lsg1 (ENSLBEG00000024261) tmem44 (ENSLBEG00000024290) ATP13A3 (ENSLBEG00000024339) opa1 (ENSLBEG00000024510) her6 (ENSLBEG00000024681) psmd1 (ENSLBEG00000024707) htr2b (ENSLBEG00000024759) acap2b (ENSLBEG00000024799) Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000153386.A ENSGT01050000244937.a.b.b ENSGT00940000156389.a Large yellow croaker MODERN SPECIES 489 ENSLCRG00005002116 SSX2IP (ENSLCRG00005002119) vtg5 (ENSLCRG00005002592) ctbs (ENSLCRG00005018244) ENSLCRG00005018245 rpf1 (ENSLCRG00005018248) ENSLCRG00005018257 uox (ENSLCRG00005018261) samd13 (ENSLCRG00005018263) ENSLCRG00005018267 ttll7 (ENSLCRG00005018290) ADGRL2 (ENSLCRG00005018405) adgrl4 (ENSLCRG00005021826) vtg3 (ENSLCRG00005021853) negr1 (ENSLCRG00005022013) zranb2 (ENSLCRG00005022017) #22 ENSLCRG00005022019 PTGER3 (ENSLCRG00005022020) #23 PTGER3 (ENSLCRG00005022021) #23 cthl (ENSLCRG00005022023) #25 ankrd13c (ENSLCRG00005022033) srsf11 (ENSLCRG00005022053) XXYLT1 (ENSLCRG00005022056) fam43a (ENSLCRG00005022058) lsg1 (ENSLCRG00005022063) tmem44 (ENSLCRG00005022071) ATP13A3 (ENSLCRG00005022083) opa1 (ENSLCRG00005022151) her6 (ENSLCRG00005022857) psmd1 (ENSLCRG00005022859) htr2b (ENSLCRG00005022872) European seabass MODERN SPECIES 17 ENSDLAG00005023145 ctbs (ENSDLAG00005023117) SPATA1 (ENSDLAG00005023108) GNG5 (ENSDLAG00005023105) rpf1 (ENSDLAG00005023048) ENSDLAG00005023038 DNASE2B (ENSDLAG00005035035) uox (ENSDLAG00005023025) ENSDLAG00005028948 ttll7 (ENSDLAG00005021891) ENSDLAG00005021865 ADGRL2 (ENSDLAG00005016946) adgrl4 (ENSDLAG00005016676) vtg3 (ENSDLAG00005014123) negr1 (ENSDLAG00005014031) zranb2 (ENSDLAG00005014012) #22 PTGER3 (ENSDLAG00005014008) #23 cthl (ENSDLAG00005013621) #25 ANKRD13C (ENSDLAG00005013474) SRSF11 (ENSDLAG00005013436) XXYLT1 (ENSDLAG00005013412) ENSDLAG00005013385 fam43a (ENSDLAG00005033431) lsg1 (ENSDLAG00005013320) tmem44 (ENSDLAG00005013287) ATP13A3 (ENSDLAG00005013162) ENSDLAG00005012552 ENSDLAG00005012522 ENSDLAG00005030728 htr2b (ENSDLAG00005012512) psmd1 (ENSDLAG00005011359) Gilthead seabream MODERN SPECIES 2 ENSSAUG00010009522 ctbs (ENSSAUG00010026130) SPATA1 (ENSSAUG00010026131) GNG5 (ENSSAUG00010026133) rpf1 (ENSSAUG00010026135) ENSSAUG00010026145 DNASE2B (ENSSAUG00010026147) uox (ENSSAUG00010026149) samd13 (ENSSAUG00010026151) ENSSAUG00010026164 ttll7 (ENSSAUG00010026265) ADGRL2 (ENSSAUG00010026364) adgrl4 (ENSSAUG00010027417) vtg3 (ENSSAUG00010027429) negr1 (ENSSAUG00010027491) zranb2 (ENSSAUG00010027495) #22 PTGER3 (ENSSAUG00010027498) #23 cthl (ENSSAUG00010027505) #25 ankrd13c (ENSSAUG00010027528) srsf11 (ENSSAUG00010027531) XXYLT1 (ENSSAUG00010027532) ENSSAUG00010027533 fam43a (ENSSAUG00010027534) lsg1 (ENSSAUG00010027535) tmem44 (ENSSAUG00010027536) ENSSAUG00010027537 ATP13A3 (ENSSAUG00010027539) opa1 (ENSSAUG00010027546) her6 (ENSSAUG00010027591) ENSSAUG00010027593 psmd1 (ENSSAUG00010027595) Perciformes ANCESTRAL SPECIES 8 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT01050000244937.a.b.b ENSGT00940000153386.A Cottioidei ANCESTRAL SPECIES 5 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT01050000244937.a.b.b ENSGT00940000153386.A Lumpfish MODERN SPECIES 19 ENSCLMG00005020145 ctbs (ENSCLMG00005020134) ENSCLMG00005020133 rpf1 (ENSCLMG00005019927) ENSCLMG00005019923 DNASE2B (ENSCLMG00005019922) uox (ENSCLMG00005019921) samd13 (ENSCLMG00005019920) ENSCLMG00005018917 ttll7 (ENSCLMG00005018913) ENSCLMG00005018911 ADGRL2 (ENSCLMG00005017812) adgrl4 (ENSCLMG00005017804) vtg3 (ENSCLMG00005017157) negr1 (ENSCLMG00005017142) zranb2 (ENSCLMG00005017141) #22 PTGER3 (ENSCLMG00005017139) #23 cthl (ENSCLMG00005017022) #25 ankrd13c (ENSCLMG00005016891) srsf11 (ENSCLMG00005016882) XXYLT1 (ENSCLMG00005016877) ENSCLMG00005016872 fam43a (ENSCLMG00005016870) lsg1 (ENSCLMG00005016849) tmem44 (ENSCLMG00005016845) ATP13A3 (ENSCLMG00005016840) ENSCLMG00005016838 opa1 (ENSCLMG00005009792) her6 (ENSCLMG00005009768) ENSCLMG00005009767 htr2b (ENSCLMG00005009765) Stickleback MODERN SPECIES 8 ENSGACG00000009769 ENSGACG00000009711 ctbs (ENSGACG00000009697) SPATA1 (ENSGACG00000009692) rpf1 (ENSGACG00000009686) ENSGACG00000009676 DNASE2B (ENSGACG00000009671) uox (ENSGACG00000009633) samd13 (ENSGACG00000009628) ENSGACG00000009607 ttll7 (ENSGACG00000009588) ADGRL2 (ENSGACG00000009545) adgrl4 (ENSGACG00000009517) vtg3 (ENSGACG00000009490) negr1 (ENSGACG00000009483) zranb2 (ENSGACG00000009457) #22 PTGER3 (ENSGACG00000009453) #23 cthl (ENSGACG00000009382) #25 ankrd13c (ENSGACG00000009375) srsf11 (ENSGACG00000009346) XXYLT1 (ENSGACG00000009343) fam43a (ENSGACG00000009337) lsg1 (ENSGACG00000009323) ATP13A3 (ENSGACG00000009295) opa1 (ENSGACG00000009278) her6 (ENSGACG00000009264) ENSGACG00000009261 htr2b (ENSGACG00000009251) psmd1 (ENSGACG00000009208) acap2b (ENSGACG00000009198) ppp1r2 (ENSGACG00000009192) Perciformes_a ANCESTRAL SPECIES 6 ENSGT00530000064273.a.b.q ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b ENSGT00940000156389.a Pike perch MODERN SPECIES 21 ENSSLUG00000023237 ENSSLUG00000025116 ctbs (ENSSLUG00000025206) GNG5 (ENSSLUG00000025207) rpf1 (ENSSLUG00000025214) ENSSLUG00000025224 DNASE2B (ENSSLUG00000025228) uox (ENSSLUG00000025234) samd13 (ENSSLUG00000025240) ENSSLUG00000025276 ttll7 (ENSSLUG00000025349) ADGRL2 (ENSSLUG00000025404) adgrl4 (ENSSLUG00000025421) vtg3 (ENSSLUG00000025462) negr1 (ENSSLUG00000025577) zranb2 (ENSSLUG00000025587) #22 PTGER3 (ENSSLUG00000025590) #23 cthl (ENSSLUG00000025621) #25 ankrd13c (ENSSLUG00000025656) srsf11 (ENSSLUG00000025666) XXYLT1 (ENSSLUG00000025670) ENSSLUG00000025672 fam43a (ENSSLUG00000025674) lsg1 (ENSSLUG00000025681) tmem44 (ENSSLUG00000025689) ATP13A3 (ENSSLUG00000025698) opa1 (ENSSLUG00000025817) her6 (ENSSLUG00000025921) ENSSLUG00000025923 psmd1 (ENSSLUG00000025936) htr2b (ENSSLUG00000025949) Channel bull blenny MODERN SPECIES 18 SSX2IP (ENSCGOG00000021754) vtg5 (ENSCGOG00000015326) ctbs (ENSCGOG00000015047) GNG5 (ENSCGOG00000015045) rpf1 (ENSCGOG00000015015) ENSCGOG00000015007 DNASE2B (ENSCGOG00000015002) uox (ENSCGOG00000014977) samd13 (ENSCGOG00000014975) ENSCGOG00000013664 ttll7 (ENSCGOG00000012830) ADGRL2 (ENSCGOG00000003997) adgrl4 (ENSCGOG00000003657) vtg3 (ENSCGOG00000002798) negr1 (ENSCGOG00000023025) zranb2 (ENSCGOG00000023023) #22 PTGER3 (ENSCGOG00000023021) #23 cthl (ENSCGOG00000022995) #25 ankrd13c (ENSCGOG00000022954) srsf11 (ENSCGOG00000022950) XXYLT1 (ENSCGOG00000022947) fam43a (ENSCGOG00000022944) lsg1 (ENSCGOG00000022859) tmem44 (ENSCGOG00000022845) ATP13A3 (ENSCGOG00000022430) opa1 (ENSCGOG00000020776) her6 (ENSCGOG00000020683) htr2b (ENSCGOG00000020680) psmd1 (ENSCGOG00000020097) acap2b (ENSCGOG00000018181) ppp1r2 (ENSCGOG00000018122) Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00940000165367 ENSGT00940000158024.A ENSGT00390000011314.n ENSGT01100000263484.A.c.a.a.b ENSGT00940000160019 ENSGT00940000164175.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000156389.a ENSGT00390000004757 Fugu MODERN SPECIES 12 ENSTRUG00000007570 EPHB3 (ENSTRUG00000007094) HYKK (ENSTRUG00000007012) NMUR1 (ENSTRUG00000006902) dynlt2b (ENSTRUG00000017381) ENSTRUG00000006879 DNASE2B (ENSTRUG00000006580) uox (ENSTRUG00000006439) samd13 (ENSTRUG00000006432) prkacbb (ENSTRUG00000022721) ttll7 (ENSTRUG00000005915) ADGRL2 (ENSTRUG00000005002) adgrl4 (ENSTRUG00000004425) vtg3 (ENSTRUG00000004037) negr1 (ENSTRUG00000024231) zranb2 (ENSTRUG00000003300) #22 PTGER3 (ENSTRUG00000002962) #23 cthl (ENSTRUG00000017362) #25 ankrd13c (ENSTRUG00000017367) srsf11 (ENSTRUG00000017369) XXYLT1 (ENSTRUG00000017377) fam43a (ENSTRUG00000017379) lsg1 (ENSTRUG00000017380) tmem44 (ENSTRUG00000025543) ATP13A3 (ENSTRUG00000017383) opa1 (ENSTRUG00000017393) her6 (ENSTRUG00000023176) htr2b (ENSTRUG00000017403) psmd1 (ENSTRUG00000017396) acap2b (ENSTRUG00000017405) ppp1r2 (ENSTRUG00000027726) Tetraodon MODERN SPECIES CDH10 (ENSTNIG00000012179) ENSTNIG00000012178 NMUR1 (ENSTNIG00000012177) dynlt2b (ENSTNIG00000012176) ENSTNIG00000000472 DNASE2B (ENSTNIG00000012175) uox (ENSTNIG00000012174) samd13 (ENSTNIG00000012173) ENSTNIG00000012172 ttll7 (ENSTNIG00000012171) ENSTNIG00000012170 ADGRL2 (ENSTNIG00000006144) adgrl4 (ENSTNIG00000010500) vtg3 (ENSTNIG00000001521) negr1 (ENSTNIG00000010499) zranb2 (ENSTNIG00000010498) #22 PTGER3 (ENSTNIG00000010497) #23 cthl (ENSTNIG00000010496) #25 ankrd13c (ENSTNIG00000010495) srsf11 (ENSTNIG00000010494) XXYLT1 (ENSTNIG00000010501) XXYLT1 (ENSTNIG00000013080) fam43a (ENSTNIG00000015571) lsg1 (ENSTNIG00000015570) ATP13A3 (ENSTNIG00000015569) opa1 (ENSTNIG00000015568) her6 (ENSTNIG00000015567) psmd1 (ENSTNIG00000015566) acap2b (ENSTNIG00000015565) ppp1r2 (ENSTNIG00000015564) ENSTNIG00000015563 Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT01010000222545 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A Anabantaria ANCESTRAL SPECIES 7 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT01010000222545 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000153386.A ENSGT01050000244937.a.b.b Zig-zag eel MODERN SPECIES 18 ENSMAMG00000022321 ctbs (ENSMAMG00000028724) SPATA1 (ENSMAMG00000022329) ENSMAMG00000022331 rpf1 (ENSMAMG00000022342) ENSMAMG00000022344 DNASE2B (ENSMAMG00000022345) ENSMAMG00000028437 samd13 (ENSMAMG00000025313) ENSMAMG00000022348 ttll7 (ENSMAMG00000022349) ADGRL2 (ENSMAMG00000022350) adgrl4 (ENSMAMG00000022351) vtg3 (ENSMAMG00000022353) negr1 (ENSMAMG00000022359) zranb2 (ENSMAMG00000022361) #22 PTGER3 (ENSMAMG00000026906) #23 ENSMAMG00000022363 CTH (ENSMAMG00000022365) #25 CTH (ENSMAMG00000022367) #25 ANKRD13C (ENSMAMG00000000319) SRSF11 (ENSMAMG00000000369) XXYLT1 (ENSMAMG00000000381) ENSMAMG00000000449 fam43a (ENSMAMG00000000463) lsg1 (ENSMAMG00000000470) ENSMAMG00000000549 ATP13A3 (ENSMAMG00000000570) ENSMAMG00000000751 ENSMAMG00000001013 ENSMAMG00000001043 Anabantoidei ANCESTRAL SPECIES 6 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT01010000222545 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000153386.A ENSGT01050000244937.a.b.b ENSGT00940000156389.a Siamese fighting fish MODERN SPECIES 15 SSX2IP (ENSBSLG00000020018) vtg5 (ENSBSLG00000020125) ctbs (ENSBSLG00000022611) ENSBSLG00000022621 ENSBSLG00000022632 rpf1 (ENSBSLG00000022640) DNASE2B (ENSBSLG00000022690) uox (ENSBSLG00000022712) samd13 (ENSBSLG00000022725) ENSBSLG00000000605 ttll7 (ENSBSLG00000000757) ADGRL2 (ENSBSLG00000001000) ENSBSLG00000001122 adgrl4 (ENSBSLG00000001130) negr1 (ENSBSLG00000001231) zranb2 (ENSBSLG00000001267) #22 PTGER3 (ENSBSLG00000001303) #23 cthl (ENSBSLG00000001469) #25 ankrd13c (ENSBSLG00000002296) srsf11 (ENSBSLG00000002635) XXYLT1 (ENSBSLG00000002765) fam43a (ENSBSLG00000002771) ENSBSLG00000002775 lsg1 (ENSBSLG00000002791) ENSBSLG00000002841 ATP13A3 (ENSBSLG00000002880) opa1 (ENSBSLG00000004179) her6 (ENSBSLG00000006309) psmd1 (ENSBSLG00000006547) htr2b (ENSBSLG00000006971) acap2b (ENSBSLG00000007121) Climbing perch MODERN SPECIES 17 ENSATEG00000010641 CTBS (ENSATEG00000010737) GNG5 (ENSATEG00000003761) RPF1 (ENSATEG00000026588) ENSATEG00000010897 DNASE2B (ENSATEG00000010909) ENSATEG00000011068 samd13 (ENSATEG00000011092) ENSATEG00000011104 ttll7 (ENSATEG00000011114) ADGRL2 (ENSATEG00000011184) ENSATEG00000011245 adgrl4 (ENSATEG00000011257) vtg3 (ENSATEG00000011276) negr1 (ENSATEG00000011369) zranb2 (ENSATEG00000011416) #22 PTGER3 (ENSATEG00000011448) #23 CTH (ENSATEG00000011460) #25 CTH (ENSATEG00000011607) #25 CTH (ENSATEG00000011560) #25 ANKRD13C (ENSATEG00000011626) SRSF11 (ENSATEG00000011691) XXYLT1 (ENSATEG00000011753) ENSATEG00000011773 fam43a (ENSATEG00000011787) lsg1 (ENSATEG00000011794) tmem44 (ENSATEG00000011823) ATP13A3 (ENSATEG00000011871) ENSATEG00000012048 ENSATEG00000012198 psmd1 (ENSATEG00000012224) Carangaria ANCESTRAL SPECIES 7 ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b Pleuronectoidei ANCESTRAL SPECIES 30 ENSGT00530000064273.a.b.q ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 Turbot MODERN SPECIES 3 ENSSMAG00000001657 htr2b (ENSSMAG00000001733) ENSSMAG00000001752 ENSSMAG00000001762 ENSSMAG00000001797 ENSSMAG00000001850 DNASE2B (ENSSMAG00000001874) ENSSMAG00000001916 samd13 (ENSSMAG00000027156) ENSSMAG00000001962 ttll7 (ENSSMAG00000002003) ADGRL2 (ENSSMAG00000002158) adgrl4 (ENSSMAG00000002535) vtg3 (ENSSMAG00000002562) negr1 (ENSSMAG00000002645) zranb2 (ENSSMAG00000022391) #22 PTGER3 (ENSSMAG00000002690) #23 cthl (ENSSMAG00000002699) #25 ANKRD13C (ENSSMAG00000002741) SRSF11 (ENSSMAG00000030705) XXYLT1 (ENSSMAG00000036746) ENSSMAG00000021957 ENSSMAG00000025599 lsg1 (ENSSMAG00000036132) ENSSMAG00000024648 ENSSMAG00000024116 rpf1 (ENSSMAG00000035103) ENSSMAG00000024008 SPATA1 (ENSSMAG00000031286) ctbs (ENSSMAG00000022367) ENSSMAG00000026394 Tongue sole MODERN SPECIES 11 ENSCSEG00000013062 ENSCSEG00000009586 ctbs (ENSCSEG00000009204) SPATA1 (ENSCSEG00000009187) ENSCSEG00000009176 rpf1 (ENSCSEG00000009153) DNASE2B (ENSCSEG00000009124) uox (ENSCSEG00000009108) samd13 (ENSCSEG00000009095) ENSCSEG00000009063 ttll7 (ENSCSEG00000008975) ADGRL2 (ENSCSEG00000008720) adgrl4 (ENSCSEG00000008702) vtg3 (ENSCSEG00000008649) negr1 (ENSCSEG00000008631) zranb2 (ENSCSEG00000008624) #22 PTGER3 (ENSCSEG00000008621) #23 cthl (ENSCSEG00000008598) #25 ankrd13c (ENSCSEG00000008576) srsf11 (ENSCSEG00000008551) XXYLT1 (ENSCSEG00000008543) fam43a (ENSCSEG00000008537) lsg1 (ENSCSEG00000008522) ENSCSEG00000008519 ENSCSEG00000008515 ENSCSEG00000007753 zbtb37 (ENSCSEG00000007745) serpinc1 (ENSCSEG00000007742) ENSCSEG00000007682 ENSCSEG00000007670 CHST7 (ENSCSEG00000007665) Carangaria_A ANCESTRAL SPECIES 3 ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b Barramundi perch MODERN SPECIES 43 ctbs (ENSLCAG00010015347) ENSLCAG00010015341 ENSLCAG00010015335 rpf1 (ENSLCAG00010015306) ENSLCAG00010015290 ENSLCAG00010015287 DNASE2B (ENSLCAG00010015285) uox (ENSLCAG00010015282) samd13 (ENSLCAG00010015281) ENSLCAG00010015104 ttll7 (ENSLCAG00010014662) ADGRL2 (ENSLCAG00010013738) adgrl4 (ENSLCAG00010013502) vtg3 (ENSLCAG00010013371) negr1 (ENSLCAG00010013341) zranb2 (ENSLCAG00010013335) #22 PTGER3 (ENSLCAG00010013332) #23 cthl (ENSLCAG00010013306) #25 ankrd13c (ENSLCAG00010013248) srsf11 (ENSLCAG00010013240) XXYLT1 (ENSLCAG00010013238) ENSLCAG00010013236 fam43a (ENSLCAG00010013234) lsg1 (ENSLCAG00010013232) ATP13A3 (ENSLCAG00010013226) opa1 (ENSLCAG00010011700) her6 (ENSLCAG00010011453) htr2b (ENSLCAG00010011448) psmd1 (ENSLCAG00010011074) acap2b (ENSLCAG00010010218) ppp1r2 (ENSLCAG00010010111) Seriola ANCESTRAL SPECIES ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000153386.A ENSGT01050000244937.a.b.b ENSGT00940000156389.a Yellowtail amberjack MODERN SPECIES 2865 ENSSLDG00000002481 DNASE2B (ENSSLDG00000002498) uox (ENSSLDG00000002517) samd13 (ENSSLDG00000002548) ENSSLDG00000002602 ttll7 (ENSSLDG00000002680) ADGRL2 (ENSSLDG00000002788) adgrl4 (ENSSLDG00000003021) vtg3 (ENSSLDG00000003144) negr1 (ENSSLDG00000003256) zranb2 (ENSSLDG00000003278) #22 PTGER3 (ENSSLDG00000003300) #23 cthl (ENSSLDG00000003323) #25 ankrd13c (ENSSLDG00000003397) Greater amberjack MODERN SPECIES ENSSDUG00000003732 ctbs (ENSSDUG00000003817) SPATA1 (ENSSDUG00000003840) ENSSDUG00000003858 rpf1 (ENSSDUG00000003879) ENSSDUG00000003932 DNASE2B (ENSSDUG00000003956) uox (ENSSDUG00000003971) samd13 (ENSSDUG00000003985) ENSSDUG00000004000 ttll7 (ENSSDUG00000004052) ADGRL2 (ENSSDUG00000004121) adgrl4 (ENSSDUG00000004200) vtg3 (ENSSDUG00000004255) negr1 (ENSSDUG00000004329) zranb2 (ENSSDUG00000004390) #22 PTGER3 (ENSSDUG00000004455) #23 cthl (ENSSDUG00000004470) #25 ankrd13c (ENSSDUG00000004522) srsf11 (ENSSDUG00000004582) XXYLT1 (ENSSDUG00000004597) ENSSDUG00000004614 fam43a (ENSSDUG00000004619) lsg1 (ENSSDUG00000004622) tmem44 (ENSSDUG00000004671) ATP13A3 (ENSSDUG00000004731) opa1 (ENSSDUG00000004968) her6 (ENSSDUG00000005107) ENSSDUG00000005120 psmd1 (ENSSDUG00000005130) htr2b (ENSSDUG00000005202) Ovalentaria ANCESTRAL SPECIES 9 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT01010000222545 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT00940000174617 Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000174617 ENSGT01050000244937.a.b.b ENSGT00940000153386.A Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000156389.a ENSGT00390000004757 ENSGT00940000154942.f Turquoise killifish MODERN SPECIES 1626 ENSNFUG00015025376 RPF1 (ENSNFUG00015025377) DNASE2B (ENSNFUG00015025379) ENSNFUG00015025380 uox (ENSNFUG00015025381) samd13 (ENSNFUG00015014052) PRKACBA (ENSNFUG00015014127) TTLL7 (ENSNFUG00015014672) ADGRL2 (ENSNFUG00015015794) ELTD1 (ENSNFUG00015023967) ENSNFUG00015024000 ENSNFUG00015024002 NEGR1 (ENSNFUG00015024006) ENSNFUG00015024011 ENSNFUG00015024013 ZRANB2 (ENSNFUG00015024016) #22 PTGER3 (ENSNFUG00015024017) #23 cthl (ENSNFUG00015024021) #25 ankrd13c (ENSNFUG00015024166) SRSF11 (ENSNFUG00015024186) ENSNFUG00015024297 ENSNFUG00015025346 SSX2IP (ENSNFUG00015025401) lpar3 (ENSNFUG00015025402) ENSNFUG00015025403 MCOLN2 (ENSNFUG00015025404) CLCC1 (ENSNFUG00015025405) FTSJ (ENSNFUG00015025406) plaat1 (ENSNFUG00015025407) mfn1b (ENSNFUG00015025408) GNB4 (ENSNFUG00015025409) Mangrove rivulus MODERN SPECIES 25 ENSKMAG00000010968 ctbs (ENSKMAG00000010864) ENSKMAG00000010847 ENSKMAG00000010830 rpf1 (ENSKMAG00000010792) ENSKMAG00000010765 DNASE2B (ENSKMAG00000010748) uox (ENSKMAG00000010716) samd13 (ENSKMAG00000010692) ENSKMAG00000010661 ttll7 (ENSKMAG00000010461) ADGRL2 (ENSKMAG00000010214) adgrl4 (ENSKMAG00000010117) vtg3 (ENSKMAG00000010048) negr1 (ENSKMAG00000010019) zranb2 (ENSKMAG00000009987) #22 PTGER3 (ENSKMAG00000009980) #23 cthl (ENSKMAG00000009929) #25 ankrd13c (ENSKMAG00000009854) srsf11 (ENSKMAG00000009775) XXYLT1 (ENSKMAG00000009730) fam43a (ENSKMAG00000009708) lsg1 (ENSKMAG00000009681) ENSKMAG00000009664 ATP13A3 (ENSKMAG00000009622) opa1 (ENSKMAG00000009415) her6 (ENSKMAG00000009341) htr2b (ENSKMAG00000009325) psmd1 (ENSKMAG00000009220) acap2b (ENSKMAG00000009026) ppp1r2 (ENSKMAG00000008990) Cyprinodontoidei ANCESTRAL SPECIES 10 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000174617 ENSGT01050000244937.a.b.b ENSGT00940000153386.A Poeciliinae ANCESTRAL SPECIES 7 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000174617 ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000156389.a Poecilia ANCESTRAL SPECIES 1 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000174617 ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000156389.a NAME_6 ANCESTRAL SPECIES 19 ENSGT00530000064273.a.b.q ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000174617 ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000156389.a Amazon molly MODERN SPECIES 262 vtg5 (ENSPFOG00000022205) ctbs (ENSPFOG00000021999) SPATA1 (ENSPFOG00000022616) rpf1 (ENSPFOG00000023197) ENSPFOG00000022742 DNASE2B (ENSPFOG00000022147) uox (ENSPFOG00000023873) samd13 (ENSPFOG00000022415) uox (ENSPFOG00000022493) ENSPFOG00000022720 ttll7 (ENSPFOG00000023019) ADGRL2 (ENSPFOG00000023060) adgrl4 (ENSPFOG00000023969) vtg3 (ENSPFOG00000022549) negr1 (ENSPFOG00000023511) zranb2 (ENSPFOG00000023402) #22 PTGER3 (ENSPFOG00000023602) #23 cthl (ENSPFOG00000022043) #25 ankrd13c (ENSPFOG00000024050) srsf11 (ENSPFOG00000022971) XXYLT1 (ENSPFOG00000023047) fam43a (ENSPFOG00000022750) lsg1 (ENSPFOG00000021882) tmem44 (ENSPFOG00000023062) ATP13A3 (ENSPFOG00000023305) opa1 (ENSPFOG00000022212) her6 (ENSPFOG00000022586) htr2b (ENSPFOG00000023759) psmd1 (ENSPFOG00000024818) acap2b (ENSPFOG00000023547) ppp1r2 (ENSPFOG00000024731) Sailfin molly MODERN SPECIES 2861 zranb2 (ENSPLAG00000002975) #22 PTGER3 (ENSPLAG00000002984) #23 ENSPLAG00000002996 SCOC (ENSPLAG00000003003) Guppy MODERN SPECIES 456 ctbs (ENSPREG00000014613) SPATA1 (ENSPREG00000014593) GNG5 (ENSPREG00000014568) rpf1 (ENSPREG00000014542) ENSPREG00000014530 DNASE2B (ENSPREG00000014515) uox (ENSPREG00000014497) samd13 (ENSPREG00000014483) ENSPREG00000014452 ttll7 (ENSPREG00000014272) ENSPREG00000014186 ADGRL2 (ENSPREG00000013924) adgrl4 (ENSPREG00000013749) vtg3 (ENSPREG00000013593) negr1 (ENSPREG00000013534) zranb2 (ENSPREG00000013499) #22 PTGER3 (ENSPREG00000013490) #23 ENSPREG00000013478 ENSPREG00000013468 ENSPREG00000013447 gclm (ENSPREG00000013425) ccl25b (ENSPREG00000013372) ENSPREG00000012954 pole4 (ENSPREG00000012888) ENSPREG00000012873 slc1a6 (ENSPREG00000012814) tax1bp3 (ENSPREG00000012783) ENSPREG00000012769 RAB8A (ENSPREG00000012725) ENSPREG00000012703 tpm4a (ENSPREG00000012635) Platyfish MODERN SPECIES 23 ctbs (ENSXMAG00000026822) SPATA1 (ENSXMAG00000017984) ENSXMAG00000017980 rpf1 (ENSXMAG00000017969) ENSXMAG00000024128 DNASE2B (ENSXMAG00000017960) samd13 (ENSXMAG00000017944) uox (ENSXMAG00000025414) ENSXMAG00000017932 ttll7 (ENSXMAG00000017924) ADGRL2 (ENSXMAG00000017908) adgrl4 (ENSXMAG00000017894) vtg3 (ENSXMAG00000017870) negr1 (ENSXMAG00000008941) ENSXMAG00000023959 zranb2 (ENSXMAG00000005445) #22 PTGER3 (ENSXMAG00000024829) #23 cthl (ENSXMAG00000005461) #25 ankrd13c (ENSXMAG00000005486) srsf11 (ENSXMAG00000005502) XXYLT1 (ENSXMAG00000005526) fam43a (ENSXMAG00000005534) lsg1 (ENSXMAG00000005536) ENSXMAG00000029100 ATP13A3 (ENSXMAG00000005554) opa1 (ENSXMAG00000005593) her6 (ENSXMAG00000023496) htr2b (ENSXMAG00000005676) psmd1 (ENSXMAG00000005638) acap2b (ENSXMAG00000005678) ppp1r2 (ENSXMAG00000023883) NAME_4 ANCESTRAL SPECIES 109 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT01010000222545 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00940000153386.A ENSGT01050000244937.a.b.b ENSGT00940000156389.a Mummichog MODERN SPECIES 2227 ctbs (ENSFHEG00000004240) SPATA1 (ENSFHEG00000004218) rpf1 (ENSFHEG00000004209) ENSFHEG00000004192 ENSFHEG00000004185 DNASE2B (ENSFHEG00000004170) uox (ENSFHEG00000004097) samd13 (ENSFHEG00000004077) ENSFHEG00000004065 ttll7 (ENSFHEG00000004010) ADGRL2 (ENSFHEG00000003963) ENSFHEG00000003937 adgrl4 (ENSFHEG00000003921) vtg3 (ENSFHEG00000003883) negr1 (ENSFHEG00000003835) zranb2 (ENSFHEG00000003774) #22 PTGER3 (ENSFHEG00000003760) #23 cthl (ENSFHEG00000003758) #25 ENSFHEG00000003742 srsf11 (ENSFHEG00000003732) XXYLT1 (ENSFHEG00000003710) fam43a (ENSFHEG00000003685) lsg1 (ENSFHEG00000003680) tmem44 (ENSFHEG00000003646) ENSFHEG00000003635 ENSFHEG00000003630 opa1 (ENSFHEG00000003616) her6 (ENSFHEG00000003566) psmd1 (ENSFHEG00000003554) htr2b (ENSFHEG00000003495) acap2b (ENSFHEG00000003400) Oryzias ANCESTRAL SPECIES 5 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT01010000222545 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT00940000159134.r.a.b.b ENSGT00940000166579 ENSGT00940000159489 ENSGT00390000008957 ENSGT00390000012482 ENSGT00950000182904.a.b.b.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.a.a ENSGT01030000234559.a.a.a ##23 ENSGT00390000003420.b ENSGT00940000165115.a ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000155561.n ENSGT00950000182975.a.a.a.a.a Oryzias_b ANCESTRAL SPECIES 15 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT00940000159134.r.a.b.b ENSGT00940000166579 ENSGT00940000159489 ENSGT00390000008957 ENSGT00390000012482 ENSGT00950000182904.a.b.b.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.a.a ENSGT01030000234559.a.a.a ##23 ENSGT00390000003420.b ENSGT00940000165115.a ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000155561.n ENSGT00950000182975.a.a.a.a.a Indian medaka MODERN SPECIES 13 ctbs (ENSOMEG00000017991) ENSOMEG00000018000 SPATA1 (ENSOMEG00000018021) rpf1 (ENSOMEG00000018084) ENSOMEG00000018125 DNASE2B (ENSOMEG00000018140) uox (ENSOMEG00000018172) samd13 (ENSOMEG00000018192) ENSOMEG00000018250 ttll7 (ENSOMEG00000018374) ENSOMEG00000018407 ADGRL2 (ENSOMEG00000000879) adgrl4 (ENSOMEG00000018882) vtg3 (ENSOMEG00000018931) negr1 (ENSOMEG00000018975) zranb2 (ENSOMEG00000019010) #22 ENSOMEG00000019025 ENSOMEG00000019097 slc5a5 (ENSOMEG00000019202) cluap1 (ENSOMEG00000019297) ccdc124 (ENSOMEG00000019332) KCNN1 (ENSOMEG00000000511) uhrf1 (ENSOMEG00000019431) kdm4b (ENSOMEG00000019470) PTPRS (ENSOMEG00000019777) ENSOMEG00000019854 tbxa2r (ENSOMEG00000019865) ##23 gipc3 (ENSOMEG00000019890) ENSOMEG00000019926 lim2.2 (ENSOMEG00000019942) WDR47 (ENSOMEG00000020012) Javanese ricefish MODERN SPECIES 18 ENSOJAG00000023249 GNG5 (ENSOJAG00000023254) rpf1 (ENSOJAG00000023271) ENSOJAG00000023301 DNASE2B (ENSOJAG00000023308) uox (ENSOJAG00000023310) samd13 (ENSOJAG00000023314) ENSOJAG00000023332 ttll7 (ENSOJAG00000023390) ADGRL2 (ENSOJAG00000023699) ENSOJAG00000023921 adgrl4 (ENSOJAG00000023926) vtg3 (ENSOJAG00000023964) ENSOJAG00000024012 negr1 (ENSOJAG00000024015) zranb2 (ENSOJAG00000024017) #22 ENSOJAG00000024019 ENSOJAG00000024023 slc5a5 (ENSOJAG00000024032) cluap1 (ENSOJAG00000024036) ccdc124 (ENSOJAG00000024040) KCNN1 (ENSOJAG00000024043) uhrf1 (ENSOJAG00000024046) kdm4b (ENSOJAG00000024062) PTPRS (ENSOJAG00000024126) tbxa2r (ENSOJAG00000024135) ##23 gipc3 (ENSOJAG00000024136) ENSOJAG00000024137 lim2.2 (ENSOJAG00000024138) wdr47b (ENSOJAG00000024139) camsap2a (ENSOJAG00000024140) Oryzias_a ANCESTRAL SPECIES 14 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT01010000222545 ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT00940000159134.r.a.b.b ENSGT00940000166579 ENSGT00940000159489 ENSGT00390000008957 ENSGT00390000012482 ENSGT00950000182904.a.b.b.b ENSGT00390000008296.a ENSGT00940000159248 ENSGT00940000153617.A.a.a ENSGT01030000234559.a.a.a ##23 ENSGT00390000003420.b ENSGT00940000165115.a ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000155561.n ENSGT00950000182975.a.a.a.a.a Japanese Medaka HdrR MODERN SPECIES 18 ctbs (ENSORLG00000006215) SPATA1 (ENSORLG00000006225) ENSORLG00000024321 rpf1 (ENSORLG00000006245) ENSORLG00000030095 DNASE2B (ENSORLG00000006278) uox (ENSORLG00000006295) samd13 (ENSORLG00000006301) ENSORLG00000006323 ttll7 (ENSORLG00000006346) ADGRL2 (ENSORLG00000006440) ENSORLG00000024088 adgrl4 (ENSORLG00000006488) vtg3 (ENSORLG00000006511) negr1 (ENSORLG00000006516) zranb2 (ENSORLG00000006527) #22 ENSORLG00000025185 ENSORLG00000006586 slc5a5 (ENSORLG00000006631) cluap1 (ENSORLG00000006654) ccdc124 (ENSORLG00000006674) KCNN1 (ENSORLG00000006679) uhrf1 (ENSORLG00000006710) kdm4b (ENSORLG00000006749) ENSORLG00000025172 ENSORLG00000029266 ENSORLG00000006794 tbxa2r (ENSORLG00000006800) ##23 gipc3 (ENSORLG00000006813) ENSORLG00000006821 lim2.2 (ENSORLG00000006831) Chinese medaka MODERN SPECIES 560 ENSOSIG00000015545 DNASE2B (ENSOSIG00000015546) uox (ENSOSIG00000015549) samd13 (ENSOSIG00000015552) prkacbb (ENSOSIG00000015558) ttll7 (ENSOSIG00000016945) ADGRL2 (ENSOSIG00000017051) ENSOSIG00000019290 adgrl4 (ENSOSIG00000019296) vtg3 (ENSOSIG00000019318) negr1 (ENSOSIG00000019582) zranb2 (ENSOSIG00000019587) #22 B3GNT3 (ENSOSIG00000019590) ENSOSIG00000019609 slc5a5 (ENSOSIG00000019657) cluap1 (ENSOSIG00000019693) ccdc124 (ENSOSIG00000019696) KCNN1 (ENSOSIG00000019800) uhrf1 (ENSOSIG00000019702) kdm4b (ENSOSIG00000019849) Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 Cichlidae ANCESTRAL SPECIES 17 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT01050000244937.a.b.b ENSGT00940000153386.A Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT01050000244937.a.b.b Nile tilapia MODERN SPECIES 6 GNG5 (ENSONIG00000040622) rpf1 (ENSONIG00000007393) ENSONIG00000032547 DNASE2B (ENSONIG00000007405) uox (ENSONIG00000007409) samd13 (ENSONIG00000007411) ENSONIG00000007412 ttll7 (ENSONIG00000002698) ENSONIG00000036779 ENSONIG00000041452 ADGRL2 (ENSONIG00000002688) adgrl4 (ENSONIG00000002680) vtg3 (ENSONIG00000002670) negr1 (ENSONIG00000002666) ENSONIG00000035052 zranb2 (ENSONIG00000002662) #22 ptger3 (ENSONIG00000027660) #23 cthl (ENSONIG00000002653) #25 ankrd13c (ENSONIG00000002649) srsf11 (ENSONIG00000002642) xxylt1 (ENSONIG00000002640) ENSONIG00000031238 fam43a (ENSONIG00000020608) lsg1 (ENSONIG00000002635) tmem44 (ENSONIG00000030597) ATP13A3 (ENSONIG00000002627) opa1 (ENSONIG00000002620) ENSONIG00000034276 her6 (ENSONIG00000002619) ENSONIG00000030249 htr2b (ENSONIG00000041313) Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT01050000244937.a.b.b Haplochromini ANCESTRAL SPECIES 23 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT01050000244937.a.b.b Haplochromini_A ANCESTRAL SPECIES 26 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01030000235558 ENSGT00940000161593 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT01050000244937.a.b.b Haplochromini_B ANCESTRAL SPECIES 29 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT01030000235558 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000177426 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT00390000003006 ENSGT01050000244937.a.b.b Zebra mbuna MODERN SPECIES 1097 ENSMZEG00005000498 SPATA1 (ENSMZEG00005000262) rpf1 (ENSMZEG00005000192) ENSMZEG00005000180 DNASE2B (ENSMZEG00005000166) uox (ENSMZEG00005000099) samd13 (ENSMZEG00005000077) ENSMZEG00005025778 ttll7 (ENSMZEG00005025770) ENSMZEG00005025766 ADGRL2 (ENSMZEG00005025763) adgrl4 (ENSMZEG00005025762) vtg3 (ENSMZEG00005018044) ENSMZEG00005017927 negr1 (ENSMZEG00005017924) zranb2 (ENSMZEG00005017916) #22 PTGER3 (ENSMZEG00005017912) #23 cthl (ENSMZEG00005017905) #25 ankrd13c (ENSMZEG00005017896) srsf11 (ENSMZEG00005017890) XXYLT1 (ENSMZEG00005017884) fam43a (ENSMZEG00005017873) ENSMZEG00005017869 lsg1 (ENSMZEG00005017865) tmem44 (ENSMZEG00005017858) ENSMZEG00005017857 ENSMZEG00005017854 ATP13A3 (ENSMZEG00005017845) opa1 (ENSMZEG00005017763) her6 (ENSMZEG00005017735) htr2b (ENSMZEG00005017733) Eastern happy MODERN SPECIES 6 ENSACLG00000001744 rpf1 (ENSACLG00000001707) ENSACLG00000001695 DNASE2B (ENSACLG00000001686) uox (ENSACLG00000001632) samd13 (ENSACLG00000001618) ENSACLG00000001595 ttll7 (ENSACLG00000001503) ENSACLG00000001380 ENSACLG00000001373 ADGRL2 (ENSACLG00000001286) ENSACLG00000001282 adgrl4 (ENSACLG00000001121) vtg3 (ENSACLG00000001081) negr1 (ENSACLG00000001022) zranb2 (ENSACLG00000000916) #22 PTGER3 (ENSACLG00000000902) #23 cthl (ENSACLG00000000700) #25 ankrd13c (ENSACLG00000000647) srsf11 (ENSACLG00000000623) XXYLT1 (ENSACLG00000000596) ENSACLG00000000587 fam43a (ENSACLG00000000585) ENSACLG00000000582 ENSACLG00000000579 lsg1 (ENSACLG00000000520) tmem44 (ENSACLG00000000508) ATP13A3 (ENSACLG00000000442) opa1 (ENSACLG00000000210) her6 (ENSACLG00000026766) ENSACLG00000026759 P. nyererei MODERN SPECIES 356 ENSPNYG00000022970 ctbs (ENSPNYG00000022950) SPATA1 (ENSPNYG00000022935) ENSPNYG00000022926 rpf1 (ENSPNYG00000022917) ENSPNYG00000022910 DNASE2B (ENSPNYG00000022904) uox (ENSPNYG00000022896) samd13 (ENSPNYG00000022886) ENSPNYG00000022873 ttll7 (ENSPNYG00000022854) ADGRL2 (ENSPNYG00000022835) adgrl4 (ENSPNYG00000022822) vtg3 (ENSPNYG00000022359) negr1 (ENSPNYG00000021984) zranb2 (ENSPNYG00000021971) #22 PTGER3 (ENSPNYG00000021955) #23 ENSPNYG00000021946 cthl (ENSPNYG00000021920) #25 ankrd13c (ENSPNYG00000021901) srsf11 (ENSPNYG00000021887) XXYLT1 (ENSPNYG00000021880) ENSPNYG00000021875 fam43a (ENSPNYG00000021867) Burton s mouthbrooder MODERN SPECIES 325 ctbs (ENSHBUG00000013509) SPATA1 (ENSHBUG00000013523) ENSHBUG00000013543 rpf1 (ENSHBUG00000013582) ENSHBUG00000013594 DNASE2B (ENSHBUG00000013603) samd13 (ENSHBUG00000013620) uox (ENSHBUG00000013645) ENSHBUG00000013715 ttll7 (ENSHBUG00000013833) ENSHBUG00000013871 ADGRL2 (ENSHBUG00000014145) adgrl4 (ENSHBUG00000014188) vtg3 (ENSHBUG00000014203) negr1 (ENSHBUG00000014226) zranb2 (ENSHBUG00000014237) #22 PTGER3 (ENSHBUG00000014251) #23 Lyretail cichlid MODERN SPECIES 312 ENSNBRG00000018114 ctbs (ENSNBRG00000018196) SPATA1 (ENSNBRG00000018279) ENSNBRG00000018328 rpf1 (ENSNBRG00000018350) ENSNBRG00000018401 uox (ENSNBRG00000018421) samd13 (ENSNBRG00000018445) ENSNBRG00000018458 ttll7 (ENSNBRG00000018486) ADGRL2 (ENSNBRG00000018535) ENSNBRG00000018564 adgrl4 (ENSNBRG00000018578) vtg3 (ENSNBRG00000018975) negr1 (ENSNBRG00000020056) zranb2 (ENSNBRG00000020083) #22 PTGER3 (ENSNBRG00000020097) #23 cthl (ENSNBRG00000020105) #25 ankrd13c (ENSNBRG00000020163) ENSNBRG00000020213 XXYLT1 (ENSNBRG00000020228) fam43a (ENSNBRG00000020246) lsg1 (ENSNBRG00000020259) tmem44 (ENSNBRG00000020295) ENSNBRG00000020317 ATP13A3 (ENSNBRG00000020333) opa1 (ENSNBRG00000020394) her6 (ENSNBRG00000020534) psmd1 (ENSNBRG00000020658) htr2b (ENSNBRG00000020740) acap2b (ENSNBRG00000020795) Midas cichlid MODERN SPECIES 441 adgrl4 (ENSACIG00000012042) vtg3 (ENSACIG00000012085) negr1 (ENSACIG00000012173) zranb2 (ENSACIG00000012191) #22 PTGER3 (ENSACIG00000012271) #23 cthl (ENSACIG00000012279) #25 ankrd13c (ENSACIG00000012310) ENSACIG00000012348 XXYLT1 (ENSACIG00000012369) fam43a (ENSACIG00000012383) lsg1 (ENSACIG00000012406) ENSACIG00000012438 ATP13A3 (ENSACIG00000012458) opa1 (ENSACIG00000012521) her6 (ENSACIG00000012599) psmd1 (ENSACIG00000012818) htr2b (ENSACIG00000012866) acap2b (ENSACIG00000012916) ppp1r2 (ENSACIG00000012971) Pomacentridae ANCESTRAL SPECIES 70 ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.j ENSGT00940000153231.B ENSGT00390000002634.a.f.a ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT00940000156348.A ENSGT00940000158252 ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 Pomacentridae_A ANCESTRAL SPECIES 225 ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00940000155136 Amphiprion ANCESTRAL SPECIES 102 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 ENSGT00390000000312 #25 ENSGT00950000182928.B.d.b ENSGT00730000110872.b.cb ENSGT00940000158154 ENSGT01090000260768 ENSGT00940000161593 ENSGT01030000234960 ENSGT00940000156442 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a.e.a ENSGT00940000165098 ENSGT00940000177981 ENSGT00390000013973.A.a.c.b.b Orange clownfish MODERN SPECIES 11 ENSAPEG00000002076 acbd6 (ENSAPEG00000002105) lhx4 (ENSAPEG00000002152) qsox1 (ENSAPEG00000002191) CEP350 (ENSAPEG00000002208) CACNA1E (ENSAPEG00000002234) ENSAPEG00000002489 soat1 (ENSAPEG00000002504) abl2 (ENSAPEG00000002591) osbpl9 (ENSAPEG00000002639) tor3a (ENSAPEG00000002774) calr (ENSAPEG00000002787) ENSAPEG00000002825 negr1 (ENSAPEG00000002850) ENSAPEG00000002919 zranb2 (ENSAPEG00000002999) #22 PTGER3 (ENSAPEG00000003025) #23 cthl (ENSAPEG00000003061) #25 ankrd13c (ENSAPEG00000003124) srsf11 (ENSAPEG00000003142) XXYLT1 (ENSAPEG00000003165) ENSAPEG00000003194 fam43a (ENSAPEG00000003222) lsg1 (ENSAPEG00000003252) PATJ (ENSAPEG00000003337) tm2d1 (ENSAPEG00000003430) nfia (ENSAPEG00000003472) frem1b (ENSAPEG00000003534) ENSAPEG00000003606 nrd1b (ENSAPEG00000003637) ENSAPEG00000003670 Clown anemonefish MODERN SPECIES 2476 zranb2 (ENSAOCG00000015750) #22 PTGER3 (ENSAOCG00000015679) #23 Spiny chromis MODERN SPECIES 2095 zranb2 (ENSAPOG00000001338) #22 PTGER3 (ENSAPOG00000001333) #23 NFKB1 (ENSAPOG00000001323) ENSAPOG00000001309 Bicolor damselfish MODERN SPECIES 891 zranb2 (ENSSPAG00000005797) #22 PTGER3 (ENSSPAG00000005787) #23 cthl (ENSSPAG00000005762) #25 ankrd13c (ENSSPAG00000005707) srsf11 (ENSSPAG00000005684) XXYLT1 (ENSSPAG00000005668) fam43a (ENSSPAG00000005654) ENSSPAG00000005642 lsg1 (ENSSPAG00000005508) Pinecone sodierfish MODERN SPECIES 18 ENSMMDG00005005269 ENSMMDG00005018121 ctbs (ENSMMDG00005018122) ENSMMDG00005018124 ENSMMDG00005018125 rpf1 (ENSMMDG00005018128) DNASE2B (ENSMMDG00005018184) uox (ENSMMDG00005018185) samd13 (ENSMMDG00005018187) ENSMMDG00005018193 ttll7 (ENSMMDG00005018866) ADGRL2 (ENSMMDG00005018902) adgrl4 (ENSMMDG00005018909) vtg3 (ENSMMDG00005018975) negr1 (ENSMMDG00005022113) zranb2 (ENSMMDG00005022114) #22 PTGER3 (ENSMMDG00005022116) #23 cthl (ENSMMDG00005022141) #25 ankrd13c (ENSMMDG00005022473) srsf11 (ENSMMDG00005022477) XXYLT1 (ENSMMDG00005022478) fam43a (ENSMMDG00005022479) lsg1 (ENSMMDG00005022481) tmem44 (ENSMMDG00005022502) ATP13A3 (ENSMMDG00005022514) opa1 (ENSMMDG00005022547) her6 (ENSMMDG00005023494) ENSMMDG00005023496 psmd1 (ENSMMDG00005023525) htr2b (ENSMMDG00005023905) acap2b (ENSMMDG00005023983) Cod MODERN SPECIES 3 ENSGMOG00000016347 ctbs (ENSGMOG00000016331) SPATA1 (ENSGMOG00000029567) ENSGMOG00000033403 rpf1 (ENSGMOG00000016281) DNASE2B (ENSGMOG00000016266) uox (ENSGMOG00000016248) samd13 (ENSGMOG00000016240) ENSGMOG00000016208 ttll7 (ENSGMOG00000016145) ADGRL2 (ENSGMOG00000016096) ENSGMOG00000029796 adgrl4 (ENSGMOG00000016062) vtg3 (ENSGMOG00000016012) negr1 (ENSGMOG00000016002) zranb2 (ENSGMOG00000015970) #22 PTGER3 (ENSGMOG00000015965) #23 cthl (ENSGMOG00000015944) #25 ANKRD13C (ENSGMOG00000015926) SRSF11 (ENSGMOG00000015896) XXYLT1 (ENSGMOG00000015879) fam43a (ENSGMOG00000015874) lsg1 (ENSGMOG00000015834) tmem44 (ENSGMOG00000029762) ATP13A3 (ENSGMOG00000015775) ENSGMOG00000027433 ENSGMOG00000034531 ENSGMOG00000024813 ENSGMOG00000015726 ENSGMOG00000030550 ENSGMOG00000035547 Protacanthopterygii ANCESTRAL SPECIES 184 ENSGT00950000183036.a.b ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688.a.a ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000153229.B ENSGT00940000163111.a.b ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078 #22 ENSGT01030000234559.b #23 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00730000111078.c #22 Salmoninae_a ANCESTRAL SPECIES 103 ENSGT00390000007029.e.a.b ENSGT00940000157019.g.a.h ENSGT00940000160748.a.d ENSGT00390000000263.b ENSGT00950000183070.a.a.mb.b.f ENSGT00980000198724 ENSGT00940000164867.b.a.b ENSGT00940000156309.A.l.d ENSGT00390000015458.e ENSGT01030000234590.A.b.a.a.c ENSGT00940000165445 ENSGT01030000234590.A.b.b.a ENSGT00510000046760.b.e ENSGT00990000210423 ENSGT00940000157375.c.j ENSGT00730000111078.c #22 ENSGT00940000158252 ENSGT00530000064273.a.b.q ENSGT01100000263614.h ENSGT00940000164903.a.f.b ENSGT00940000159991.A.a.r.a ENSGT00940000158525.u.f Salmo ANCESTRAL SPECIES 64 ENSGT00390000000263.b ENSGT00950000183070.a.a.mb.b.f ENSGT01080000258647 ENSGT00940000164867.b.a.b ENSGT01070000254044 ENSGT00940000156309.A.l.d ENSGT00390000015458.e ENSGT00940000174919 ENSGT01030000234590.A.b.a.a.c ENSGT00940000165445 ENSGT01030000234590.A.b.b.a ENSGT00510000046760.b.e ENSGT00990000210423 ENSGT00390000011943.b.n ENSGT00940000157375.c.j ENSGT00730000111078.c #22 ENSGT00940000158252 ENSGT00530000064273.a.b.q ENSGT00940000155404.i.a.c.a ENSGT01100000263614.h ENSGT00940000164903.a.f.b ENSGT00940000159991.A.a.r.a ENSGT00940000158525.u.f ENSGT00940000165613.c.b ENSGT01010000222313.A.b.b.a.a.a.a ENSGT00390000008969.c ENSGT00940000161103.a.b ENSGT01100000263556.a.a.q.c.b.a.a.a ENSGT00940000154308.A.a.a.a.e.a ENSGT01080000259813 ENSGT00390000015229.v River trout MODERN SPECIES 33 pde6d (ENSSTUG00000000605) phb2b (ENSSTUG00000000361) ENSSTUG00000000330 dlg1a (ENSSTUG00000000251) ENSSTUG00000000194 senp5 (ENSSTUG00000000177) ENSSTUG00000000082 hps3 (ENSSTUG00000000077) ENSSTUG00000000056 ENSSTUG00000051025 tm4sf4 (ENSSTUG00000051024) wwtr1 (ENSSTUG00000051023) ENSSTUG00000051022 rpl36 (ENSSTUG00000051021) ENSSTUG00000051020 zranb2 (ENSSTUG00000051019) #22 adgrl4 (ENSSTUG00000051018) ENSSTUG00000051017 ENSSTUG00000039656 CLDN18 (ENSSTUG00000039100) insra (ENSSTUG00000036381) ENSSTUG00000036301 ENSSTUG00000036273 ENSSTUG00000036252 ENSSTUG00000036009 ENSSTUG00000035959 nlk1 (ENSSTUG00000035749) TLCD3B (ENSSTUG00000035730) mvp (ENSSTUG00000035104) ENSSTUG00000035069 ENSSTUG00000035060 Atlantic salmon MODERN SPECIES 15 ENSSSAG00000076289 ENSSSAG00000076064 pde6d (ENSSSAG00000076055) PHB2 (ENSSSAG00000075693) ENSSSAG00000075676 ENSSSAG00000082287 dlg1a (ENSSSAG00000075520) ENSSSAG00000075502 ENSSSAG00000111881 ENSSSAG00000075476 ENSSSAG00000075456 ENSSSAG00000075446 ENSSSAG00000075433 RL36 (ENSSSAG00000075425) ENSSSAG00000075417 ENSSSAG00000075410 #22 adgrl4 (ENSSSAG00000075371) ENSSSAG00000054140 ENSSSAG00000053522 ENSSSAG00000052155 ENSSSAG00000099342 ENSSSAG00000008130 ENSSSAG00000076984 ENSSSAG00000075864 ENSSSAG00000113341 nlk1 (ENSSSAG00000003453) ENSSSAG00000075483 MVP (ENSSSAG00000074980) ENSSSAG00000074949 ENSSSAG00000074945 ENSSSAG00000074942 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000157019.g.a.h ENSGT00940000160748.a.d ENSGT00390000000263.b ENSGT00950000183070.a.a.mb.b.f ENSGT00980000198724 ENSGT00940000164867.b.a.b ENSGT00940000156309.A.l.d ENSGT00390000015458.e ENSGT01030000234590.A.b.a.a.c ENSGT00940000165445 ENSGT01030000234590.A.b.b.a ENSGT00510000046760.b.e ENSGT00990000210423 ENSGT00390000011943.a.a ENSGT00940000157375.c.j ENSGT00730000111078.c #22 ENSGT00940000158252 ENSGT00530000064273.a.b.q.a ENSGT00940000158655.e ENSGT00940000155404.i.a.c.a ENSGT01100000263614.h ENSGT00940000164903.a.f.b ENSGT00940000159991.A.a.r.a ENSGT00940000158525.u.f ENSGT00940000165613.c ENSGT01010000222313.A.b.b.a.a.a.b.b ENSGT00390000008969.c ENSGT00940000161103.a.b ENSGT01100000263556.a.a.q.c.b.a.a.a ENSGT00940000154308.A.a.a.a.e.a ENSGT00530000064242.a.m Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000157019.g.a.h ENSGT00940000160748.a.d ENSGT00390000000263.b ENSGT00950000183070.a.a.mb.b.f ENSGT00980000198724 ENSGT00940000164867.b.a.b ENSGT00940000156309.A.l.d ENSGT00390000015458.e ENSGT01030000234590.A.b.a.a.c ENSGT00940000165445 ENSGT01030000234590.A.b.b.a ENSGT00510000046760.b.e ENSGT00990000210423 ENSGT00390000011943.a.a ENSGT00940000157375.c.j ENSGT00730000111078.c #22 ENSGT00940000158252 ENSGT00530000064273.a.b.q.a.d ENSGT00530000064273.a.b.q.a.c.a.a.b ENSGT00940000158655.e ENSGT00940000155404.i.a.c.a ENSGT01100000263614.h ENSGT00940000164903.a.f.b ENSGT00940000159991.A.a.r.a ENSGT00940000158525.u.f ENSGT00940000165613.c ENSGT01010000222313.A.b.b.a.a.a.b.b ENSGT00390000008969.c ENSGT00940000161103.a.b ENSGT01100000263556.a.a.q.c.b.a.a.a ENSGT00940000154308.A.a.a.a.e.a Coho salmon MODERN SPECIES 1 nr2f6b (ENSOKIG00005011192) ENSOKIG00005011206 ENSOKIG00005011209 pde6d (ENSOKIG00005011214) phb2b (ENSOKIG00005011247) ENSOKIG00005011312 dlg1a (ENSOKIG00005011690) ENSOKIG00005017079 hps3 (ENSOKIG00005017104) ENSOKIG00005017116 ENSOKIG00005017121 tm4sf4 (ENSOKIG00005017135) wwtr1 (ENSOKIG00005017175) RPL36 (ENSOKIG00005017187) ENSOKIG00005017197 zranb2 (ENSOKIG00005017229) #22 adgrl4 (ENSOKIG00005017245) ENSOKIG00005017822 ENSOKIG00005031708 CLDN18 (ENSOKIG00005031911) insra (ENSOKIG00005032019) ENSOKIG00005033182 ENSOKIG00005033211 ENSOKIG00005033280 ENSOKIG00005033532 nlk1 (ENSOKIG00005033593) ENSOKIG00005033830 mvp (ENSOKIG00005033903) ENSOKIG00005034917 ENSOKIG00005034932 ENSOKIG00005034944 Chinook salmon MODERN SPECIES ANO8 (ENSOTSG00005028038) nr2f6b (ENSOTSG00005028040) pde6d (ENSOTSG00005028041) phb2b (ENSOTSG00005028047) ptmaa (ENSOTSG00005028073) dlg1a (ENSOTSG00005028081) senp5 (ENSOTSG00005029101) hps3 (ENSOTSG00005029109) ENSOTSG00005029130 ENSOTSG00005029134 tm4sf4 (ENSOTSG00005029138) wwtr1 (ENSOTSG00005029141) ENSOTSG00005029142 rpl36 (ENSOTSG00005029145) ENSOTSG00005029146 zranb2 (ENSOTSG00005029148) #22 adgrl4 (ENSOTSG00005029150) ENSOTSG00005029155 ENSOTSG00005031321 CLDN18 (ENSOTSG00005031323) insra (ENSOTSG00005031330) ENSOTSG00005031610 ENSOTSG00005031612 nupr1b (ENSOTSG00005031615) sgf29 (ENSOTSG00005031618) spns1 (ENSOTSG00005031624) atxn2l (ENSOTSG00005031631) ENSOTSG00005031635 nlk1 (ENSOTSG00005031636) TLCD3B (ENSOTSG00005031691) mvp (ENSOTSG00005031702) Rainbow trout MODERN SPECIES 22 ENSOMYG00000012776 pde6d (ENSOMYG00000012786) ENSOMYG00000012852 ENSOMYG00000074656 dlg1a (ENSOMYG00000013962) ENSOMYG00000068909 ENSOMYG00000022336 hps3 (ENSOMYG00000022409) ENSOMYG00000049348 ENSOMYG00000022501 tm4sf4 (ENSOMYG00000022531) wwtr1 (ENSOMYG00000022543) ENSOMYG00000022559 ENSOMYG00000022571 ENSOMYG00000022583 ENSOMYG00000022601 #22 ENSOMYG00000022656 ENSOMYG00000060035 ENSOMYG00000077605 ENSOMYG00000056182 ENSOMYG00000063774 ENSOMYG00000050014 ENSOMYG00000076282 ENSOMYG00000068286 ENSOMYG00000071797 ENSOMYG00000052760 ENSOMYG00000040168 ENSOMYG00000040861 ENSOMYG00000068309 ENSOMYG00000045361 ENSOMYG00000045368 Huchen MODERN SPECIES 148 mapk3 (ENSHHUG00000035192) gdpd3a (ENSHHUG00000035142) ypel3 (ENSHHUG00000035129) ENSHHUG00000035124 srrm2 (ENSHHUG00000035086) ENSHHUG00000035072 ENSHHUG00000035058 rnf25 (ENSHHUG00000035036) kat8 (ENSHHUG00000034994) ALDOA (ENSHHUG00000034863) PPP4C (ENSHHUG00000034819) ENSHHUG00000034816 tspan4b (ENSHHUG00000034812) pax10 (ENSHHUG00000034800) rcn3 (ENSHHUG00000034789) zranb2 (ENSHHUG00000034778) #22 Salmoninae ANCESTRAL SPECIES 595 ENSGT00950000183036.a.b ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688.a.a ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000153229.B ENSGT00940000163111.a.b.z ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078.d #22 ENSGT01030000234559.b #23 Salmoninae_a ANCESTRAL SPECIES 163 ENSGT00940000158024.A.c.b ENSGT00950000183036.a.b ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688.a.a ENSGT00530000064273.a.b.r ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000153229.B ENSGT00940000163111.a.b.z ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078.d #22 ENSGT01030000234559.b #23 Oncorhynchus ANCESTRAL SPECIES 25 ENSGT00940000158024.A.c.b ENSGT00950000183036.a.b ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688.a.a ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000153229.B ENSGT00940000163111.a.b.z ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078.d #22 ENSGT01030000234559.b #23 ENSGT00940000153582.a.m.a.a.b.b.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000162441.j.b.a.b.b.a.a.b.b.a.a ENSGT00940000153582.a.m.a.a.b.b.b.a.b.a.a.b.a.a.b.a.a ENSGT00940000155490.a.c.a.c.b ENSGT00940000154045.b.d.a ENSGT00940000156671.l.b.a ENSGT00940000155144.n.t ENSGT00950000183136.a.b.f ENSGT00530000063867.a.b.m.b ENSGT01030000234517.H.a.f ENSGT00940000164834.b.f ENSGT00390000016478.e.a ENSGT00940000154862.x.a.b.a.b ENSGT00950000182772.A.a.b.`b.b.h Oncorhynchus_a ANCESTRAL SPECIES 17 ENSGT00940000158024.A.c.b ENSGT00950000183036.a.b ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688.a.a ENSGT00940000175306 ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000153229.B ENSGT00940000163111.a.b.z ENSGT00940000159078 ENSGT01010000222545 ENSGT00940000156348.A ENSGT00530000064273.a.a ENSGT00940000159289 ENSGT00730000111078.d #22 ENSGT01030000234559.b #23 ENSGT00940000153582.a.m.a.a.b.b.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000162441.j.b.a.b.b.a.a.b.b.a.a ENSGT00950000183169.A.a.a.a.b.a.b.a.b.a.a.b.a ENSGT00940000153582.a.m.a.a.b.b.b.a.b.a.a.b.a.a.b.a.a ENSGT00940000155490.a.c.a.c.b ENSGT00940000154045.b.d.a ENSGT00940000156671.l.b.a ENSGT00940000155144.n.t ENSGT00950000183136.a.b.f ENSGT00530000063867.a.b.m.b ENSGT01030000234517.H.a.f ENSGT00940000164834.b.f ENSGT00390000016478.e.a ENSGT00940000154862.x.a.b.a.b Coho salmon MODERN SPECIES 13 SSX2IP (ENSOKIG00005049331) ENSOKIG00005049308 ctbs (ENSOKIG00005049302) SPATA1 (ENSOKIG00005049285) ENSOKIG00005049275 uox (ENSOKIG00005049274) ENSOKIG00005049248 ENSOKIG00005049233 ttll7 (ENSOKIG00005048990) ENSOKIG00005048926 ENSOKIG00005048920 ADGRL2 (ENSOKIG00005048057) vtg3 (ENSOKIG00005044510) ENSOKIG00005044219 negr1 (ENSOKIG00005044206) ENSOKIG00005044185 #22 PTGER3 (ENSOKIG00005044179) #23 ENSOKIG00005044174 ENSOKIG00005044167 ENSOKIG00005044159 ENSOKIG00005044140 ENSOKIG00005044129 ENSOKIG00005044123 ENSOKIG00005044119 ENSOKIG00005044116 ENSOKIG00005044112 ENSOKIG00005044109 ENSOKIG00005044105 ENSOKIG00005044097 ENSOKIG00005044088 ENSOKIG00005044077 Chinook salmon MODERN SPECIES 9 SOBP (ENSOTSG00005010727) ENSOTSG00005010726 ENSOTSG00005010725 SIM1 (ENSOTSG00005010722) GRIK2 (ENSOTSG00005009970) lin28b (ENSOTSG00005009958) prep (ENSOTSG00005009948) ENSOTSG00005009945 mycn (ENSOTSG00005009944) ENSOTSG00005009516 erh (ENSOTSG00005009512) paplnb (ENSOTSG00005009511) zbtb1 (ENSOTSG00005009510) ENSOTSG00005009509 MTHFD1 (ENSOTSG00005002684) zranb2 (ENSOTSG00005002579) #22 PTGER3 (ENSOTSG00005002576) #23 ENSOTSG00005002526 Northern pike MODERN SPECIES 7 ENSELUG00000012150 ENSELUG00000012158 mmachc (ENSELUG00000012175) si:ch211-198n5.11 (ENSELUG00000001601) rpe65b (ENSELUG00000012274) depdc1a (ENSELUG00000012378) LRRC7 (ENSELUG00000012686) lrrc40 (ENSELUG00000012790) sox2 (ENSELUG00000012841) dnajc19 (ENSELUG00000012861) fxr1 (ENSELUG00000012917) ttc14 (ENSELUG00000012936) ENSELUG00000000468 LRRC24 (ENSELUG00000012962) EPHB1 (ENSELUG00000013008) zranb2 (ENSELUG00000013041) #22 PTGER3 (ENSELUG00000013065) #23 pak2b (ENSELUG00000013169) pigx (ENSELUG00000013193) cep19 (ENSELUG00000013204) ing5 (ENSELUG00000013274) plekhb2 (ENSELUG00000013300) ankrd29 (ENSELUG00000013386) ENSELUG00000013401 ttc39c (ENSELUG00000013479) OSBPL1A (ENSELUG00000013634) dohh (ENSELUG00000013668) ENSELUG00000013777 MFSD12 (ENSELUG00000013866) csnk1g2b (ENSELUG00000013973) zgc:101100 (ENSELUG00000014000) Spotted gar MODERN SPECIES 648 tor3a (ENSLOCG00000009789) osbpl9 (ENSLOCG00000009802) xpr1a (ENSLOCG00000009831) ENSLOCG00000009849 nrd1b (ENSLOCG00000009851) ENSLOCG00000009886 ENSLOCG00000009890 frem1b (ENSLOCG00000009896) nfia (ENSLOCG00000009919) tm2d1 (ENSLOCG00000009936) PATJ (ENSLOCG00000009943) tal1 (ENSLOCG00000009966) ier5 (ENSLOCG00000017746) stx6 (ENSLOCG00000009973) ENSLOCG00000009981 zranb2 (ENSLOCG00000010010) #22 PTGER3 (ENSLOCG00000010015) #23 cthl (ENSLOCG00000010025) #25 ankrd13c (ENSLOCG00000010043) rpf1 (ENSLOCG00000010053) gng5 (ENSLOCG00000010068) SPATA1 (ENSLOCG00000010073) ctbs (ENSLOCG00000010081) ENSLOCG00000010091 vtg5 (ENSLOCG00000010104) ENSLOCG00000010151 ENSLOCG00000010161 TRABD2B (ENSLOCG00000010171) FOXD2 (ENSLOCG00000017747) foxe3 (ENSLOCG00000017748) cmpk (ENSLOCG00000010183) Reedfish MODERN SPECIES 1 ENSECRG00000014284 ENSECRG00000014271 ENSECRG00000014258 ENSECRG00000014237 ENSECRG00000014220 ENSECRG00000014205 ENSECRG00000014117 ENSECRG00000014093 srsf11 (ENSECRG00000014053) fnbp1l (ENSECRG00000014011) si:ch211-198n5.11 (ENSECRG00000013972) rpe65b (ENSECRG00000013860) depdc1a (ENSECRG00000013804) LRRC7 (ENSECRG00000013764) lrrc40 (ENSECRG00000013715) zranb2 (ENSECRG00000013692) #22 cthl (ENSECRG00000013651) #25 ankrd13c (ENSECRG00000013549) cyp4t8 (ENSECRG00000013506) ENSECRG00000013494 ENSECRG00000013486 ENSECRG00000013479 ENSECRG00000013474 ENSECRG00000013466 ENSECRG00000013455 ENSECRG00000013442 ENSECRG00000013434 ENSECRG00000013428 ENSECRG00000013417 cyp4t8 (ENSECRG00000013398) negr1 (ENSECRG00000013372) Elephant shark MODERN SPECIES 1737 zranb2 (ENSCMIG00000001181) #22 PTGER3 (ENSCMIG00000001176) #23 cth (ENSCMIG00000001111) #25 ankrd13c (ENSCMIG00000001034) srsf11 (ENSCMIG00000001022) ENSCMIG00000001018 lrrc40 (ENSCMIG00000000986) ENSCMIG00000000964 ENSCMIG00000000958 ENSCMIG00000000950 rpe65b (ENSCMIG00000000886) ENSCMIG00000000863 si:ch211-198n5.11 (ENSCMIG00000000852) wls (ENSCMIG00000000828) ENSCMIG00000000815 GNG12 (ENSCMIG00000000805) Cyclostomata ANCESTRAL SPECIES ENSGT00730000111078 #22 Hagfish MODERN SPECIES 135 b3gnt7 (ENSEBUG00000011306) ENSEBUG00000005156 ENSEBUG00000005140 ENSEBUG00000015887 ENSEBUG00000009476 ENSEBUG00000015686 ENSEBUG00000007023 ENSEBUG00000009799 ENSEBUG00000016378 ENSEBUG00000009926 ENSEBUG00000001615 ENSEBUG00000001255 ENSEBUG00000006724 capzb (ENSEBUG00000013260) ppih (ENSEBUG00000013254) ENSEBUG00000016713 #22 ENSEBUG00000011195 ENSEBUG00000001730 ENSEBUG00000003766 prdx4 (ENSEBUG00000013735) cdk10 (ENSEBUG00000013521) Ciona ANCESTRAL SPECIES ENSGT00730000111078 #22 Ciona savignyi MODERN SPECIES 216 ENSCSAVG00000001427 ENSCSAVG00000001426 ENSCSAVG00000001424 ENSCSAVG00000001422 ENSCSAVG00000001421 ENSCSAVG00000001416 ENSCSAVG00000001362 ENSCSAVG00000001361 ENSCSAVG00000001358 ENSCSAVG00000001355 ENSCSAVG00000001353 ENSCSAVG00000001352 ENSCSAVG00000001347 ENSCSAVG00000000873 ENSCSAVG00000000869 ENSCSAVG00000000864 #22 ENSCSAVG00000000860 Ciona intestinalis MODERN SPECIES 702 zf(rbz) (ENSCING00000020967) #22 Ecdysozoa ANCESTRAL SPECIES ENSGT00730000111078 #22 Fruitfly MODERN SPECIES 17 CG42565 (FBgn0260767) CG13511 (FBgn0034759) CG13510 (FBgn0034758) CG43325 (FBgn0263030) CG43326 (FBgn0263031) CG30196 (FBgn0050196) Cyp6d2 (FBgn0034756) nsr (FBgn0034740) CG3746 (FBgn0034755) CG34445 (FBgn0085474) CG34446 (FBgn0085475) CG30195 (FBgn0050195) CG2852 (FBgn0034753) Ugt317A1 (FBgn0040091) RpS24 (FBgn0261596) CG3732 (FBgn0034750) #22 bonsai (FBgn0026261) Cdk9 (FBgn0019949) CG17807 (FBgn0034748) CG33143 (FBgn0053143) tous (FBgn0034745) Vps20 (FBgn0034744) RpS16 (FBgn0034743) CG4294 (FBgn0034742) CG4269 (FBgn0034741) CG3927 (FBgn0034739) dnr1 (FBgn0260866) CG11362 (FBgn0034737) gas (FBgn0034736) px (FBgn0003175) CG4610 (FBgn0034735) Caenorhabditis elegans MODERN SPECIES 1 ins-19 (WBGene00002102) srh-71 (WBGene00005292) T10D4.6 (WBGene00020408) T10D4.7 (WBGene00020409) clec-123 (WBGene00021288) Y25C1A.2 (WBGene00021289) Y25C1A.13 (WBGene00021296) clec-122 (WBGene00021290) clec-121 (WBGene00021291) srg-24 (WBGene00005181) Y25C1A.14 (WBGene00194985) srg-23 (WBGene00005180) srg-22 (WBGene00005179) srg-21 (WBGene00005178) copb-1 (WBGene00021292) Y25C1A.8 (WBGene00021295) #22 Y25C1A.7 (WBGene00021294) Y25C1A.6 (WBGene00021293) lin-8 (WBGene00002997) lido-13 (WBGene00015200) sri-31 (WBGene00005543) sri-28 (WBGene00005540) sri-30 (WBGene00005542) sri-29 (WBGene00005541) B0454.8 (WBGene00015199) B0454.5 (WBGene00015196) B0454.26 (WBGene00206372) B0454.6 (WBGene00015197) clec-2 (WBGene00015198) clec-3 (WBGene00016577) C41H7.2 (WBGene00016572)