Sarcopterygii ANCESTRAL SPECIES 100 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162805 ENSGT00940000165232 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000155042.a.b #14 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.a.a ##31 ENSGT00390000006387 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 Tetrapoda ANCESTRAL SPECIES 8 ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Amniota ANCESTRAL SPECIES 9 ENSGT00390000011196 ENSGT00940000161527.c ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Mammalia ANCESTRAL SPECIES 47 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00980000201734 ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000159943 #34 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Theria ANCESTRAL SPECIES 3 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000155173 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Eutheria ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000155173 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Glires ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Lagomorpha ANCESTRAL SPECIES 8 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000155173 ENSGT00940000160927 ENSGT00980000201734 ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000155042.a.b #14 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Rabbit MODERN SPECIES 4 TRABD2B (ENSOCUG00000035774) #7 ENSOCUG00000031714 #8 SLC5A9 (ENSOCUG00000007119) #9 ENSOCUG00000021113 #10 SPATA6 (ENSOCUG00000008704) #11 ENSOCUG00000006460 #12 BEND5 (ENSOCUG00000006471) #13 ENSOCUG00000033406 #14 ENSOCUG00000011146 #15 ENSOCUG00000023561 #16 ENSOCUG00000035051 #17 ENSOCUG00000031084 #18 ENSOCUG00000029778 #19 ENSOCUG00000030354 #20 ENSOCUG00000037999 #21 ELAVL4 (ENSOCUG00000016262) #22 DMRTA2 (ENSOCUG00000001019) #23 FAF1 (ENSOCUG00000031945) #24 CDKN2C (ENSOCUG00000008385) #25 ENSOCUG00000038347 #26 C1orf185 (ENSOCUG00000027363) #27 RNF11 (ENSOCUG00000007582) #28 TTC39A (ENSOCUG00000007583) #29 EPS15 (ENSOCUG00000004293) #30 ENSOCUG00000023504 #31 OSBPL9 (ENSOCUG00000004303) #32 NRDC (ENSOCUG00000004330) #33 RAB3B (ENSOCUG00000001969) #34 ENSOCUG00000033633 #35 TXNDC12 (ENSOCUG00000001972) #36 ENSOCUG00000001517 #37 Pika MODERN SPECIES 2665 ELAVL4 (ENSOPRG00000015300) #22 Rodentia ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Rodentia_B ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Kangaroo rat MODERN SPECIES 352 ENSDORG00000024423 ENSDORG00000028283 ENSDORG00000008850 ENSDORG00000027207 Cyp4x1 (ENSDORG00000015306) Pdzk1ip1 (ENSDORG00000004566) Tal1 (ENSDORG00000028266) Stil (ENSDORG00000004571) Cmpk1 (ENSDORG00000004576) Foxd2 (ENSDORG00000028126) Trabd2b (ENSDORG00000023562) #7 Slc5a9 (ENSDORG00000010547) #9 Spata6 (ENSDORG00000010310) #11 Agbl4 (ENSDORG00000012728) #12 Bend5 (ENSDORG00000005815) #13 Elavl4 (ENSDORG00000012729) #22 Dmrta2 (ENSDORG00000015486) #23 Faf1 (ENSDORG00000015487) #24 ENSDORG00000023988 Fpgt (ENSDORG00000028813) Tnni3k (ENSDORG00000010710) ENSDORG00000010715 Cryz (ENSDORG00000002723) ENSDORG00000002718 Myomorpha ANCESTRAL SPECIES 3 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Muroidea ANCESTRAL SPECIES 3 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A.a.a.b ENSGT00940000162562.A.a.b ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00960000191437 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 Murinae ANCESTRAL SPECIES 2 ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000165990.b ENSGT00940000165990.a ENSGT00940000162562.A.a.a.b ENSGT00940000162562.A.a.b ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00960000191437 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 Mus ANCESTRAL SPECIES 3 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00520000058517 ENSGT00940000161273 #7 ENSGT00940000165990.b ENSGT00940000165990.a ENSGT00940000162562.A.a.a.b ENSGT00940000162562.A.a.b ENSGT00940000164707.b ENSGT00940000164707.a ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00960000191437 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 Mus_A ANCESTRAL SPECIES 3 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00520000058517 ENSGT00940000161273 #7 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b ENSGT00940000162562.A.a.b ENSGT00940000164707.b ENSGT00940000164707.a ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00960000191437 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 Ryukyu mouse MODERN SPECIES 13 MGP_CAROLIEiJ_G0026305 Tal1 (MGP_CAROLIEiJ_G0026304) Stil (MGP_CAROLIEiJ_G0026303) Cmpk1 (MGP_CAROLIEiJ_G0026302) Foxe3 (MGP_CAROLIEiJ_G0026301) Foxd2 (MGP_CAROLIEiJ_G0026300) Trabd2b (MGP_CAROLIEiJ_G0026299) #7 Skint10 (MGP_CAROLIEiJ_G0026298) MGP_CAROLIEiJ_G0026297 Skint1 (MGP_CAROLIEiJ_G0026296) MGP_CAROLIEiJ_G0026294 Slc5a9 (MGP_CAROLIEiJ_G0026293) #9 Spata6 (MGP_CAROLIEiJ_G0026292) #11 Bend5 (MGP_CAROLIEiJ_G0026291) #13 Agbl4 (MGP_CAROLIEiJ_G0026290) #12 Elavl4 (MGP_CAROLIEiJ_G0026289) #22 Dmrta2 (MGP_CAROLIEiJ_G0026288) #23 Faf1 (MGP_CAROLIEiJ_G0026287) #24 Cdkn2c (MGP_CAROLIEiJ_G0026286) #25 4930522H14Rik (MGP_CAROLIEiJ_G0026285) #27 Rnf11 (MGP_CAROLIEiJ_G0026284) #28 Ttc39a (MGP_CAROLIEiJ_G0026283) #29 Eps15 (MGP_CAROLIEiJ_G0026282) #30 MGP_CAROLIEiJ_G0026281 #31 Osbpl9 (MGP_CAROLIEiJ_G0026280) #32 Nrd1 (MGP_CAROLIEiJ_G0026279) #33 Rab3b (MGP_CAROLIEiJ_G0026278) #34 Kti12 (MGP_CAROLIEiJ_G0026277) MGP_CAROLIEiJ_G0026276 #35 Txndc12 (MGP_CAROLIEiJ_G0026275) #36 MGP_CAROLIEiJ_G0026274 #37 Mus_B ANCESTRAL SPECIES 5 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00520000058517 ENSGT00940000161273 #7 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b ENSGT00940000162562.A.a.b ENSGT00940000164707.b ENSGT00940000164707.a ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00960000191437 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 Mouse MODERN SPECIES 13 Skint11 (ENSMUSG00000057977) Skint5 (ENSMUSG00000078598) Skint6 (ENSMUSG00000087194) Skint10 (ENSMUSG00000048766) Skint2 (ENSMUSG00000034359) Skint9 (ENSMUSG00000049972) Skint3 (ENSMUSG00000070868) Skint4 (ENSMUSG00000055960) Skint1 (ENSMUSG00000089773) Skint7 (ENSMUSG00000049214) Skint8 (ENSMUSG00000078599) Slc5a9 (ENSMUSG00000028544) #9 Spata6 (ENSMUSG00000034401) #11 Bend5 (ENSMUSG00000028545) #13 Agbl4 (ENSMUSG00000061298) #12 Elavl4 (ENSMUSG00000028546) #22 Dmrta2 (ENSMUSG00000047143) #23 Faf1 (ENSMUSG00000010517) #24 Cdkn2c (ENSMUSG00000028551) #25 4930522H14Rik (ENSMUSG00000060491) #27 Rnf11 (ENSMUSG00000028557) #28 Ttc39a (ENSMUSG00000028555) #29 Eps15 (ENSMUSG00000028552) #30 Calr4 (ENSMUSG00000028558) #31 Osbpl9 (ENSMUSG00000028559) #32 Nrd1 (ENSMUSG00000053510) #33 Rab3b (ENSMUSG00000003411) #34 Kti12 (ENSMUSG00000073775) Txndc12 (ENSMUSG00000028567) #36 Btf3l4 (ENSMUSG00000028568) #37 Zfyve9 (ENSMUSG00000034557) Mus_C ANCESTRAL SPECIES 2 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00520000058517 ENSGT00940000161273 #7 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b ENSGT00940000162562.A.a.b ENSGT00940000164707.b ENSGT00940000164707.a ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00960000191437 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 spretus MODERN SPECIES 13 Cmpk1 (MGP_SPRETEiJ_G0027274) Foxe3 (MGP_SPRETEiJ_G0027273) Foxd2 (MGP_SPRETEiJ_G0027272) MGP_SPRETEiJ_G0027271 Trabd2b (MGP_SPRETEiJ_G0027270) #7 MGP_SPRETEiJ_G0027269 Skint10 (MGP_SPRETEiJ_G0027267) Skint2 (MGP_SPRETEiJ_G0027266) Skint1 (MGP_SPRETEiJ_G0027265) MGP_SPRETEiJ_G0027264 Skint7 (MGP_SPRETEiJ_G0027263) Slc5a9 (MGP_SPRETEiJ_G0027262) #9 Spata6 (MGP_SPRETEiJ_G0027261) #11 Bend5 (MGP_SPRETEiJ_G0027260) #13 Agbl4 (MGP_SPRETEiJ_G0027259) #12 Elavl4 (MGP_SPRETEiJ_G0027258) #22 Dmrta2 (MGP_SPRETEiJ_G0027257) #23 Faf1 (MGP_SPRETEiJ_G0027256) #24 Cdkn2c (MGP_SPRETEiJ_G0027255) #25 4930522H14Rik (MGP_SPRETEiJ_G0027254) #27 Rnf11 (MGP_SPRETEiJ_G0027253) #28 Ttc39a (MGP_SPRETEiJ_G0027252) #29 Eps15 (MGP_SPRETEiJ_G0027251) #30 Calr4 (MGP_SPRETEiJ_G0027250) #31 Osbpl9 (MGP_SPRETEiJ_G0027249) #32 Nrd1 (MGP_SPRETEiJ_G0027248) #33 Rab3b (MGP_SPRETEiJ_G0027247) #34 Kti12 (MGP_SPRETEiJ_G0027246) MGP_SPRETEiJ_G0027245 #35 Txndc12 (MGP_SPRETEiJ_G0027244) #36 MGP_SPRETEiJ_G0027243 #37 Steppe mouse MODERN SPECIES 3208 Elavl4 (ENSMSIG00000010996) #22 ENSMSIG00000010976 Dmrta2 (ENSMSIG00000010966) #23 Faf1 (ENSMSIG00000010918) #24 Cdkn2c (ENSMSIG00000010907) #25 ENSMSIG00000010900 4930522H14Rik (ENSMSIG00000010887) #27 Rnf11 (ENSMSIG00000010854) #28 Ttc39a (ENSMSIG00000010745) #29 Eps15 (ENSMSIG00000010254) #30 Calr4 (ENSMSIG00000010220) #31 Osbpl9 (ENSMSIG00000010057) #32 Nrd1 (ENSMSIG00000009746) #33 ENSMSIG00000009731 Rab3b (ENSMSIG00000009714) #34 ENSMSIG00000009709 #35 Shrew mouse MODERN SPECIES 19 Stil (MGP_PahariEiJ_G0028637) Cmpk1 (MGP_PahariEiJ_G0028636) Foxe3 (MGP_PahariEiJ_G0028635) Foxd2 (MGP_PahariEiJ_G0028634) MGP_PahariEiJ_G0028633 Trabd2b (MGP_PahariEiJ_G0028632) #7 MGP_PahariEiJ_G0028631 MGP_PahariEiJ_G0028630 Skint1 (MGP_PahariEiJ_G0028629) MGP_PahariEiJ_G0028628 MGP_PahariEiJ_G0028627 Slc5a9 (MGP_PahariEiJ_G0028626) #9 Spata6 (MGP_PahariEiJ_G0028625) #11 Bend5 (MGP_PahariEiJ_G0028624) #13 Agbl4 (MGP_PahariEiJ_G0028623) #12 Elavl4 (MGP_PahariEiJ_G0028622) #22 Dmrta2 (MGP_PahariEiJ_G0028621) #23 Faf1 (MGP_PahariEiJ_G0028620) #24 Cdkn2c (MGP_PahariEiJ_G0028619) #25 4930522H14Rik (MGP_PahariEiJ_G0028618) #27 Rnf11 (MGP_PahariEiJ_G0028617) #28 Ttc39a (MGP_PahariEiJ_G0028616) #29 Eps15 (MGP_PahariEiJ_G0028615) #30 Calr4 (MGP_PahariEiJ_G0028614) #31 Osbpl9 (MGP_PahariEiJ_G0028613) #32 Nrd1 (MGP_PahariEiJ_G0028612) #33 Rab3b (MGP_PahariEiJ_G0028611) #34 Kti12 (MGP_PahariEiJ_G0028610) MGP_PahariEiJ_G0028609 #35 Txndc12 (MGP_PahariEiJ_G0028608) #36 MGP_PahariEiJ_G0028607 #37 Rat MODERN SPECIES 15 Foxe3 (ENSRNOG00000007770) Foxd2 (ENSRNOG00000007759) Trabd2b (ENSRNOG00000029141) #7 Skint10 (ENSRNOG00000022988) LOC100911818 (ENSRNOG00000067091) ENSRNOG00000068199 ENSRNOG00000063781 ENSRNOG00000067562 ENSRNOG00000063827 Skint4 (ENSRNOG00000042047) Skint1 (ENSRNOG00000043194) Skint8 (ENSRNOG00000037680) Slc5a9 (ENSRNOG00000042950) #9 Spata6 (ENSRNOG00000007568) #11 Bend5 (ENSRNOG00000008025) #13 Elavl4 (ENSRNOG00000023601) #22 Dmrta2 (ENSRNOG00000068045) #23 Faf1 (ENSRNOG00000008523) #24 Cdkn2c (ENSRNOG00000008956) #25 LOC689589 (ENSRNOG00000009138) #27 Rnf11 (ENSRNOG00000057589) #28 Ttc39a (ENSRNOG00000047573) #29 Eps15 (ENSRNOG00000010299) #30 Calr4 (ENSRNOG00000037710) #31 Osbpl9 (ENSRNOG00000033593) #32 Nrdc (ENSRNOG00000007111) #33 Rab3b (ENSRNOG00000008001) #34 Kti12 (ENSRNOG00000070073) Txndc12 (ENSRNOG00000008090) #36 Btf3l4 (ENSRNOG00000008512) #37 AABR07049554.2 (ENSRNOG00000049469) Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A.a.a.b ENSGT00940000162562.A.a.b ENSGT00940000164707.d ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00960000191437 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Cricetinae ANCESTRAL SPECIES 5 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A.a.a.b ENSGT00940000162562.A.a.b ENSGT00940000164707.d ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00900000142372 #35 ENSGT00940000154296 #37 ENSGT00950000183489 Golden Hamster MODERN SPECIES 648 Stil (ENSMAUG00000018720) ENSMAUG00000019205 Foxe3 (ENSMAUG00000010093) Foxd2 (ENSMAUG00000010964) ENSMAUG00000009858 Trabd2b (ENSMAUG00000006510) #7 ENSMAUG00000013879 ENSMAUG00000004245 ENSMAUG00000008748 ENSMAUG00000020229 Slc5a9 (ENSMAUG00000016902) #9 ENSMAUG00000008507 #11 ENSMAUG00000021230 #11 Agbl4 (ENSMAUG00000020446) #12 Bend5 (ENSMAUG00000007838) #13 Elavl4 (ENSMAUG00000021566) #22 Dmrta2 (ENSMAUG00000012169) #23 Faf1 (ENSMAUG00000011844) #24 Cdkn2c (ENSMAUG00000019466) #25 4930522H14Rik (ENSMAUG00000018143) #27 Rnf11 (ENSMAUG00000014680) #28 Ttc39a (ENSMAUG00000013412) #29 Eps15 (ENSMAUG00000021661) #30 Calr4 (ENSMAUG00000016786) #31 Osbpl9 (ENSMAUG00000011321) #32 Nrd1 (ENSMAUG00000012215) #33 ENSMAUG00000010138 Rab3b (ENSMAUG00000012473) #34 Txndc12 (ENSMAUG00000008444) #36 ENSMAUG00000007753 #35 ENSMAUG00000010455 #37 Chinese hamster chok1gshd MODERN SPECIES 111 Tal1 (ENSCGRG00001023671) Stil (ENSCGRG00001012804) Cmpk1 (ENSCGRG00001016283) Foxe3 (ENSCGRG00001005301) Foxd2 (ENSCGRG00001010484) ENSCGRG00001022727 Trabd2b (ENSCGRG00001016130) #7 ENSCGRG00001018354 ENSCGRG00001021187 ENSCGRG00001021660 ENSCGRG00001023213 Slc5a9 (ENSCGRG00001019511) #9 Spata6 (ENSCGRG00001001168) #11 Agbl4 (ENSCGRG00001017075) #12 Bend5 (ENSCGRG00001018629) #13 Elavl4 (ENSCGRG00001020348) #22 Dmrta2 (ENSCGRG00001010624) #23 Faf1 (ENSCGRG00001012451) #24 Cdkn2c (ENSCGRG00001013915) #25 4930522H14Rik (ENSCGRG00001016306) #27 Rnf11 (ENSCGRG00001018595) #28 Ttc39a (ENSCGRG00001020495) #29 Eps15 (ENSCGRG00001009890) #30 Calr4 (ENSCGRG00001011514) #31 Osbpl9 (ENSCGRG00001021068) #32 Nrd1 (ENSCGRG00001022296) #33 Rab3b (ENSCGRG00001013853) #34 Txndc12 (ENSCGRG00001019312) #36 ENSCGRG00001021460 #37 ENSCGRG00001021792 Zfyve9 (ENSCGRG00001023802) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000165990 ENSGT00940000162562.A.a.a.b ENSGT00940000162562.A.a.b ENSGT00940000164707.d ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00960000191437 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Prairie vole MODERN SPECIES 1 Pdzk1ip1 (ENSMOCG00000021926) Tal1 (ENSMOCG00000015608) Stil (ENSMOCG00000001995) Cmpk1 (ENSMOCG00000019310) Foxe3 (ENSMOCG00000008738) Foxd2 (ENSMOCG00000002875) Trabd2b (ENSMOCG00000002510) #7 ENSMOCG00000012467 ENSMOCG00000013586 ENSMOCG00000003588 ENSMOCG00000019561 Slc5a9 (ENSMOCG00000022328) #9 ENSMOCG00000021709 #11 Bend5 (ENSMOCG00000003340) #13 Agbl4 (ENSMOCG00000016733) #12 Elavl4 (ENSMOCG00000010309) #22 Dmrta2 (ENSMOCG00000018451) #23 Faf1 (ENSMOCG00000016469) #24 Cdkn2c (ENSMOCG00000008425) #25 4930522H14Rik (ENSMOCG00000014783) #27 Rnf11 (ENSMOCG00000014218) #28 Ttc39a (ENSMOCG00000009418) #29 Eps15 (ENSMOCG00000004099) #30 Calr4 (ENSMOCG00000002656) #31 ENSMOCG00000017309 Osbpl9 (ENSMOCG00000017056) #32 Nrd1 (ENSMOCG00000008359) #33 Rab3b (ENSMOCG00000013133) #34 ENSMOCG00000008572 #35 Txndc12 (ENSMOCG00000007402) #36 ENSMOCG00000012648 #37 Northern American deer mouse MODERN SPECIES 11 Stil (ENSPEMG00000023881) Cmpk1 (ENSPEMG00000021852) Foxe3 (ENSPEMG00000025577) Trabd2b (ENSPEMG00000021574) #7 ENSPEMG00000008143 ENSPEMG00000023162 ENSPEMG00000026129 ENSPEMG00000030740 ENSPEMG00000021558 Skint1 (ENSPEMG00000011155) ENSPEMG00000021177 Slc5a9 (ENSPEMG00000021770) #9 Spata6 (ENSPEMG00000022120) #11 Bend5 (ENSPEMG00000022292) #13 Agbl4 (ENSPEMG00000023297) #12 Elavl4 (ENSPEMG00000021058) #22 Dmrta2 (ENSPEMG00000028558) #23 Faf1 (ENSPEMG00000022043) #24 Cdkn2c (ENSPEMG00000029349) #25 ENSPEMG00000030255 4930522H14Rik (ENSPEMG00000020496) #27 Rnf11 (ENSPEMG00000028550) #28 Ttc39a (ENSPEMG00000021737) #29 ENSPEMG00000029734 Eps15 (ENSPEMG00000017501) #30 Calr4 (ENSPEMG00000015759) #31 Osbpl9 (ENSPEMG00000023026) #32 Nrd1 (ENSPEMG00000021266) #33 Rab3b (ENSPEMG00000009732) #34 ENSPEMG00000029069 #35 Txndc12 (ENSPEMG00000027936) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 780 ENSNGAG00000006899 #11 ENSNGAG00000011566 #12 Bend5 (ENSNGAG00000016052) #13 ENSNGAG00000020205 #12 Elavl4 (ENSNGAG00000023123) #22 Dmrta2 (ENSNGAG00000010314) #23 Faf1 (ENSNGAG00000015466) #24 ENSNGAG00000023426 Cdkn2c (ENSNGAG00000001881) #25 Lesser Egyptian jerboa MODERN SPECIES 98 Cyp4x1 (ENSJJAG00000009131) Pdzk1ip1 (ENSJJAG00000013927) ENSJJAG00000013211 Foxd2 (ENSJJAG00000014328) Spata6 (ENSJJAG00000010848) #11 ENSJJAG00000009281 #12 Bend5 (ENSJJAG00000007543) #13 ENSJJAG00000004932 #12 Elavl4 (ENSJJAG00000023099) #22 ENSJJAG00000014086 Dmrta2 (ENSJJAG00000021824) #23 Faf1 (ENSJJAG00000021352) #24 Cdkn2c (ENSJJAG00000020524) #25 Alg10b (ENSJJAG00000019582) Syt10 (ENSJJAG00000019374) Pkp2 (ENSJJAG00000014586) Yars2 (ENSJJAG00000000641) Dnm1l (ENSJJAG00000023169) ENSJJAG00000013851 Fgd4 (ENSJJAG00000018423) Gng12 (ENSJJAG00000017730) Gadd45a (ENSJJAG00000016764) ENSJJAG00000016243 ENSJJAG00000016153 Rodentia_A ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690.nb #32 ENSGT00940000154690.mb.b #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000163570.a ENSGT00940000155173.f.a ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690.nb #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000001377 STIL (ENSHGLG00000001713) ENSHGLG00000001416 FOXE3 (ENSHGLG00000034395) ENSHGLG00000049793 ENSHGLG00000020805 ENSHGLG00000010693 #7 ENSHGLG00000037697 SLC5A9 (ENSHGLG00000003161) #9 ENSHGLG00000002670 SPATA6 (ENSHGLG00000014205) #11 ENSHGLG00000011360 #13 ENSHGLG00000034647 #13 ENSHGLG00000039566 ENSHGLG00000043536 ELAVL4 (ENSHGLG00000000485) #22 ENSHGLG00000037718 DMRTA2 (ENSHGLG00000001509) #23 CDKN2C (ENSHGLG00000034852) #25 FAF1 (ENSHGLG00000000538) #24 ENSHGLG00000034536 ENSHGLG00000001310 #29 ENSHGLG00000000349 #30 ENSHGLG00000003489 #31 ENSHGLG00000002972 ENSHGLG00000001285 #32 ENSHGLG00000032380 ENSHGLG00000002902 #33 ENSHGLG00000044000 ENSHGLG00000031974 #34 ENSHGLG00000000345 #35 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000163570.a ENSGT00940000155173.f.a ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690.nb #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Hystricomorpha_b ANCESTRAL SPECIES 54 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000163570.a ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589.k ENSGT00940000163540 ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690.nb #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Degu MODERN SPECIES 148 PDZK1IP1 (ENSODEG00000008906) TAL1 (ENSODEG00000006602) STIL (ENSODEG00000007478) ENSODEG00000007423 ENSODEG00000006760 ENSODEG00000019646 ENSODEG00000008585 TRABD2B (ENSODEG00000007567) #7 SLC5A9 (ENSODEG00000007740) #9 SPATA6 (ENSODEG00000006382) #11 BEND5 (ENSODEG00000007742) #13 ENSODEG00000006988 ENSODEG00000019354 AGBL4 (ENSODEG00000009564) #12 ENSODEG00000007109 ELAVL4 (ENSODEG00000006770) #22 DMRTA2 (ENSODEG00000006537) #23 FAF1 (ENSODEG00000010743) #24 CDKN2C (ENSODEG00000010220) #25 ENSODEG00000007244 ENSODEG00000006863 ENSODEG00000009865 ENSODEG00000009489 #28 TTC39A (ENSODEG00000006441) #29 EPS15 (ENSODEG00000006324) #30 ENSODEG00000007342 #31 OSBPL9 (ENSODEG00000005945) #32 NRDC (ENSODEG00000007264) #33 RAB3B (ENSODEG00000008282) #34 ENSODEG00000006614 #35 ENSODEG00000006041 #36 Long-tailed chinchilla MODERN SPECIES 171 TEX38 (ENSCLAG00000006425) EFCAB14 (ENSCLAG00000005792) ENSCLAG00000005609 ENSCLAG00000005036 ENSCLAG00000004484 CYP4B1 (ENSCLAG00000007349) PDZK1IP1 (ENSCLAG00000007015) TAL1 (ENSCLAG00000006842) STIL (ENSCLAG00000006217) ENSCLAG00000005985 TRABD2B (ENSCLAG00000005900) #7 SLC5A9 (ENSCLAG00000007839) #9 SPATA6 (ENSCLAG00000007504) #11 BEND5 (ENSCLAG00000007168) #13 AGBL4 (ENSCLAG00000006735) #12 ELAVL4 (ENSCLAG00000005476) #22 DMRTA2 (ENSCLAG00000008314) #23 FAF1 (ENSCLAG00000008153) #24 CDKN2C (ENSCLAG00000007763) #25 C1orf185 (ENSCLAG00000007634) #27 ENSCLAG00000006939 TTC39A (ENSCLAG00000005328) #29 EPS15 (ENSCLAG00000005042) #30 ENSCLAG00000004460 ENSCLAG00000009812 #31 OSBPL9 (ENSCLAG00000006250) #32 NRDC (ENSCLAG00000004925) #33 RAB3B (ENSCLAG00000004516) #34 ENSCLAG00000004470 #35 TXNDC12 (ENSCLAG00000004403) #36 BTF3L4 (ENSCLAG00000007659) #37 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 112 ENSCPOG00000013870 #11 AGBL4 (ENSCPOG00000013872) #12 BEND5 (ENSCPOG00000013879) #13 ENSCPOG00000002044 #22 ENSCPOG00000030212 FAF1 (ENSCPOG00000001151) #24 CDKN2C (ENSCPOG00000031293) #25 RNF11 (ENSCPOG00000031987) #28 TTC39A (ENSCPOG00000008138) #29 EPS15 (ENSCPOG00000009273) #30 ENSCPOG00000023884 #31 OSBPL9 (ENSCPOG00000010663) #32 NRDC (ENSCPOG00000010677) #33 RAB3B (ENSCPOG00000007714) #34 TXNDC12 (ENSCPOG00000038607) #36 ENSCPOG00000031935 #35 BTF3L4 (ENSCPOG00000036248) #37 ENSCPOG00000033698 ZFYVE9 (ENSCPOG00000005063) Guinea pig MODERN SPECIES 64 CHCHD7 (ENSCPOG00000030280) PLAG1 (ENSCPOG00000039131) MOS (ENSCPOG00000020476) ENSCPOG00000011697 ENSCPOG00000030320 LYN (ENSCPOG00000011693) TGS1 (ENSCPOG00000009713) TMEM68 (ENSCPOG00000019826) XKR4 (ENSCPOG00000003676) ENSCPOG00000039324 SOX17 (ENSCPOG00000000892) MRPL15 (ENSCPOG00000035946) LYPLA1 (ENSCPOG00000022715) TCEA1 (ENSCPOG00000005886) ENSCPOG00000038533 ENSCPOG00000022816 #22 ATP6V1H (ENSCPOG00000012174) ENSCPOG00000023180 OPRK1 (ENSCPOG00000006607) NPBWR1 (ENSCPOG00000019602) RB1CC1 (ENSCPOG00000020341) ENSCPOG00000034718 ENSCPOG00000032897 ST18 (ENSCPOG00000005486) PCMTD1 (ENSCPOG00000038704) SNTG1 (ENSCPOG00000010462) ENSCPOG00000033449 CLXN (ENSCPOG00000003325) UBE2V2 (ENSCPOG00000039321) MCM4 (ENSCPOG00000003682) PRKDC (ENSCPOG00000013944) Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A.c ENSGT00940000162562.A.d ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988.f #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690.mb.b #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Marmotini ANCESTRAL SPECIES ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A.c ENSGT00940000164707.e.b ENSGT00940000162562.A.d ENSGT00940000164707.e.a ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988.f #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690.mb.b #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Alpin marmot MODERN SPECIES 15 PDZK1IP1 (ENSMMMG00000018092) ENSMMMG00000018085 STIL (ENSMMMG00000018013) CMPK1 (ENSMMMG00000017986) FOXD2 (ENSMMMG00000017982) TRABD2B (ENSMMMG00000017951) #7 ENSMMMG00000017939 ENSMMMG00000017918 ENSMMMG00000017906 ENSMMMG00000017897 ENSMMMG00000017885 SLC5A9 (ENSMMMG00000017850) #9 ENSMMMG00000017834 #11 BEND5 (ENSMMMG00000017823) #13 AGBL4 (ENSMMMG00000017802) #12 ELAVL4 (ENSMMMG00000017637) #22 ENSMMMG00000017613 FAF1 (ENSMMMG00000017599) #24 CDKN2C (ENSMMMG00000017571) #25 ENSMMMG00000017564 C1orf185 (ENSMMMG00000017543) #27 RNF11 (ENSMMMG00000017539) #28 TTC39A (ENSMMMG00000017526) #29 EPS15 (ENSMMMG00000017432) #30 ENSMMMG00000017404 #31 ENSMMMG00000017393 ENSMMMG00000016694 #32 NRDC (ENSMMMG00000016570) #33 RAB3B (ENSMMMG00000016565) #34 TXNDC12 (ENSMMMG00000016554) #36 BTF3L4 (ENSMMMG00000016539) #37 Marmotini_b ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A.c ENSGT00940000162562.A.d ENSGT00940000164707.e.a ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988.f #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751.m #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690.mb.b #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Arctic ground squirrel MODERN SPECIES 21 ENSUPAG00010022468 #11 BEND5 (ENSUPAG00010022467) #13 ENSUPAG00010022466 ENSUPAG00010022464 AGBL4 (ENSUPAG00010022463) #12 ELAVL4 (ENSUPAG00010022399) #22 DMRTA2 (ENSUPAG00010022391) #23 FAF1 (ENSUPAG00010022385) #24 CDKN2C (ENSUPAG00010022383) #25 C1orf185 (ENSUPAG00010022379) #27 RNF11 (ENSUPAG00010022375) #28 TTC39A (ENSUPAG00010022367) #29 EPS15 (ENSUPAG00010022360) #30 ENSUPAG00010022352 #31 ENSUPAG00010021819 #32 NRDC (ENSUPAG00010021802) #33 RAB3B (ENSUPAG00010021800) #34 TXNDC12 (ENSUPAG00010021798) #36 BTF3L4 (ENSUPAG00010021796) #37 ENSUPAG00010021795 ZFYVE9 (ENSUPAG00010021759) Squirrel MODERN SPECIES 122 ELAVL4 (ENSSTOG00000027271) #22 DMRTA2 (ENSSTOG00000024624) #23 FAF1 (ENSSTOG00000002849) #24 CDKN2C (ENSSTOG00000013796) #25 C1orf185 (ENSSTOG00000028403) #27 ENSSTOG00000020072 #28 TTC39A (ENSSTOG00000009015) #29 ENSSTOG00000023598 #30 ENSSTOG00000022882 #31 ENSSTOG00000000692 #32 NRDC (ENSSTOG00000000706) #33 RAB3B (ENSSTOG00000016470) #34 ENSSTOG00000032439 #35 TXNDC12 (ENSSTOG00000006093) #36 BTF3L4 (ENSSTOG00000006129) #37 ENSSTOG00000025134 Eurasian red squirrel MODERN SPECIES CYP4X1 (ENSSVLG00005010957) PDZK1IP1 (ENSSVLG00005011099) TAL1 (ENSSVLG00005011145) STIL (ENSSVLG00005011246) ENSSVLG00005012034 FOXE3 (ENSSVLG00005012158) FOXD2 (ENSSVLG00005012190) TRABD2B (ENSSVLG00005012216) #7 ENSSVLG00005012317 ENSSVLG00005012369 ENSSVLG00005012469 SLC5A9 (ENSSVLG00005012665) #9 SPATA6 (ENSSVLG00005013178) #11 AGBL4 (ENSSVLG00005013331) #12 BEND5 (ENSSVLG00005013425) #13 ELAVL4 (ENSSVLG00005014154) #22 DMRTA2 (ENSSVLG00005014792) #23 FAF1 (ENSSVLG00005014843) #24 CDKN2C (ENSSVLG00005014944) #25 C1orf185 (ENSSVLG00005015015) #27 ENSSVLG00005015219 ENSSVLG00005015243 #28 TTC39A (ENSSVLG00005015332) #29 EPS15 (ENSSVLG00005015885) #30 ENSSVLG00005016035 ENSSVLG00005016060 #31 OSBPL9 (ENSSVLG00005016219) #32 ENSSVLG00005016989 NRDC (ENSSVLG00005017058) #33 RAB3B (ENSSVLG00005017555) #34 TXNDC12 (ENSSVLG00005017615) #36 Tree shrew MODERN SPECIES 1418 SPATA6 (ENSTBEG00000011254) #11 AGBL4 (ENSTBEG00000011525) #12 ELAVL4 (ENSTBEG00000011730) #22 Primates ANCESTRAL SPECIES 4 ENSGT00940000160927.e ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Strepsirrhini ANCESTRAL SPECIES ENSGT00940000161441 ENSGT00940000163504 ENSGT00940000160927.e ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Lemuriformes ANCESTRAL SPECIES ENSGT00940000161441 ENSGT00940000163504 ENSGT00940000160927.e ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296.qb.a #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Mouse lemur MODERN SPECIES 11 CYP4A11 (ENSMICG00000000965) ENSMICG00000031270 CYP4B1 (ENSMICG00000000962) PDZK1IP1 (ENSMICG00000043731) TAL1 (ENSMICG00000045732) STIL (ENSMICG00000005402) CMPK1 (ENSMICG00000005386) FOXE3 (ENSMICG00000029422) FOXD2 (ENSMICG00000034204) TRABD2B (ENSMICG00000033266) #7 SLC5A9 (ENSMICG00000012426) #9 SPATA6 (ENSMICG00000003269) #11 BEND5 (ENSMICG00000003282) #13 ENSMICG00000037766 AGBL4 (ENSMICG00000003275) #12 ELAVL4 (ENSMICG00000003286) #22 DMRTA2 (ENSMICG00000044233) #23 FAF1 (ENSMICG00000003299) #24 CDKN2C (ENSMICG00000033935) #25 C1orf185 (ENSMICG00000004061) #27 ENSMICG00000005503 ENSMICG00000047946 #28 TTC39A (ENSMICG00000008377) #29 ENSMICG00000001200 #30 ENSMICG00000044074 ENSMICG00000002731 #32 ENSMICG00000029083 NRDC (ENSMICG00000002748) #33 RAB3B (ENSMICG00000036580) #34 TXNDC12 (ENSMICG00000042975) #36 ENSMICG00000002807 #37 Lemuriformes_a ANCESTRAL SPECIES 20 ENSGT00940000161441 ENSGT00940000163504 ENSGT00940000160927.e ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296.qb.a #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Greater bamboo lemur MODERN SPECIES 669 AGBL4 (ENSPSMG00000002663) #12 BEND5 (ENSPSMG00000002676) #13 ELAVL4 (ENSPSMG00000002850) #22 DMRTA2 (ENSPSMG00000003033) #23 FAF1 (ENSPSMG00000003116) #24 CDKN2C (ENSPSMG00000003155) #25 C1orf185 (ENSPSMG00000003162) #27 RNF11 (ENSPSMG00000003177) #28 TTC39A (ENSPSMG00000003263) #29 EPS15 (ENSPSMG00000003371) #30 ENSPSMG00000003543 ENSPSMG00000003562 #31 ENSPSMG00000003628 #32 Coquerels sifaka MODERN SPECIES 162 SLC5A9 (ENSPCOG00000004667) #9 SPATA6 (ENSPCOG00000008715) #11 BEND5 (ENSPCOG00000023490) #13 AGBL4 (ENSPCOG00000019895) #12 ELAVL4 (ENSPCOG00000024957) #22 DMRTA2 (ENSPCOG00000028074) #23 ENSPCOG00000028658 FAF1 (ENSPCOG00000025141) #24 CDKN2C (ENSPCOG00000019258) #25 ENSPCOG00000026759 C1orf185 (ENSPCOG00000025481) #27 RNF11 (ENSPCOG00000015322) #28 TTC39A (ENSPCOG00000018198) #29 ENSPCOG00000012900 #30 OSBPL9 (ENSPCOG00000027695) #32 NRDC (ENSPCOG00000024524) #33 RAB3B (ENSPCOG00000018696) #34 TXNDC12 (ENSPCOG00000022275) #36 ENSPCOG00000026062 #37 ZFYVE9 (ENSPCOG00000028070) Bushbaby MODERN SPECIES 274 SLC5A9 (ENSOGAG00000005008) #9 SPATA6 (ENSOGAG00000005014) #11 ENSOGAG00000004600 #12 BEND5 (ENSOGAG00000005779) #13 ENSOGAG00000026942 #12 ELAVL4 (ENSOGAG00000016990) #22 DMRTA2 (ENSOGAG00000026143) #23 ENSOGAG00000033138 FAF1 (ENSOGAG00000003624) #24 CDKN2C (ENSOGAG00000003625) #25 RNF11 (ENSOGAG00000011682) #28 TTC39A (ENSOGAG00000011685) #29 EPS15 (ENSOGAG00000001077) #30 ENSOGAG00000026601 #31 OSBPL9 (ENSOGAG00000003787) #32 ENSOGAG00000003792 #33 RAB3B (ENSOGAG00000003796) #34 TXNDC12 (ENSOGAG00000003798) #36 BTF3L4 (ENSOGAG00000030256) #37 ZFYVE9 (ENSOGAG00000015445) CC2D1B (ENSOGAG00000032430) Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000160927.f ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Simiiformes ANCESTRAL SPECIES 3 ENSGT00940000160927.f ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296.jb.a #37 ENSGT00940000154290.a ENSGT00390000009595.a Catarrhini ANCESTRAL SPECIES 3 ENSGT00940000160927.f ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 Hominidae ANCESTRAL SPECIES 3 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00940000160927.f ENSGT00940000163504.a.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 Gorilla MODERN SPECIES ENSGGOG00000021983 CYP4X1 (ENSGGOG00000000133) ENSGGOG00000001801 ENSGGOG00000015363 PDZK1IP1 (ENSGGOG00000011765) TAL1 (ENSGGOG00000043148) STIL (ENSGGOG00000000512) ENSGGOG00000039974 TRABD2B (ENSGGOG00000037702) #7 ENSGGOG00000044020 SLC5A9 (ENSGGOG00000012140) #9 ENSGGOG00000028320 SPATA6 (ENSGGOG00000001284) #11 AGBL4 (ENSGGOG00000043434) #12 BEND5 (ENSGGOG00000003566) #13 ELAVL4 (ENSGGOG00000000634) #22 ENSGGOG00000024575 ENSGGOG00000013269 #23 FAF1 (ENSGGOG00000013273) #24 CDKN2C (ENSGGOG00000017023) #25 C1orf185 (ENSGGOG00000015902) #27 ENSGGOG00000040829 RNF11 (ENSGGOG00000004919) #28 ENSGGOG00000025934 TTC39A (ENSGGOG00000012965) #29 EPS15 (ENSGGOG00000006160) #30 OSBPL9 (ENSGGOG00000004787) #32 NRDC (ENSGGOG00000004793) #33 RAB3B (ENSGGOG00000001562) #34 TXNDC12 (ENSGGOG00000010208) #36 BTF3L4 (ENSGGOG00000010677) #37 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00940000160927.f ENSGT00940000163504.b ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 Human MODERN SPECIES CYP4A11 (ENSG00000187048) CYP4X1 (ENSG00000186377) CYP4Z1 (ENSG00000186160) CYP4A22 (ENSG00000162365) PDZK1IP1 (ENSG00000162366) TAL1 (ENSG00000162367) STIL (ENSG00000123473) CMPK1 (ENSG00000162368) FOXE3 (ENSG00000186790) FOXD2 (ENSG00000186564) TRABD2B (ENSG00000269113) #7 SLC5A9 (ENSG00000117834) #9 SPATA6 (ENSG00000132122) #11 AGBL4 (ENSG00000186094) #12 BEND5 (ENSG00000162373) #13 ELAVL4 (ENSG00000162374) #22 DMRTA2 (ENSG00000142700) #23 FAF1 (ENSG00000185104) #24 CDKN2C (ENSG00000123080) #25 C1orf185 (ENSG00000204006) #27 RNF11 (ENSG00000123091) #28 TTC39A (ENSG00000085831) #29 EPS15 (ENSG00000085832) #30 OSBPL9 (ENSG00000117859) #32 NRDC (ENSG00000078618) #33 RAB3B (ENSG00000169213) #34 TXNDC12 (ENSG00000117862) #36 KTI12 (ENSG00000198841) BTF3L4 (ENSG00000134717) #37 ZFYVE9 (ENSG00000157077) CC2D1B (ENSG00000154222) Pan ANCESTRAL SPECIES ENSGT00940000160927.f ENSGT00940000163504.b ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296.jb.a.f.a #37 Bonobo MODERN SPECIES CYP4B1 (ENSPPAG00000033977) CYP4A11 (ENSPPAG00000040374) CYP4X1 (ENSPPAG00000034593) CYP4Z1 (ENSPPAG00000033041) CYP4A22 (ENSPPAG00000030867) PDZK1IP1 (ENSPPAG00000032727) TAL1 (ENSPPAG00000033189) STIL (ENSPPAG00000037591) ENSPPAG00000027235 TRABD2B (ENSPPAG00000015081) #7 SLC5A9 (ENSPPAG00000034646) #9 ENSPPAG00000009942 SPATA6 (ENSPPAG00000028728) #11 AGBL4 (ENSPPAG00000033362) #12 BEND5 (ENSPPAG00000040466) #13 ELAVL4 (ENSPPAG00000042402) #22 ENSPPAG00000023840 ENSPPAG00000035672 ENSPPAG00000033541 #23 FAF1 (ENSPPAG00000032838) #24 CDKN2C (ENSPPAG00000038172) #25 C1orf185 (ENSPPAG00000024891) #27 ENSPPAG00000032042 RNF11 (ENSPPAG00000039746) #28 TTC39A (ENSPPAG00000031439) #29 EPS15 (ENSPPAG00000033044) #30 OSBPL9 (ENSPPAG00000021541) #32 NRDC (ENSPPAG00000034186) #33 RAB3B (ENSPPAG00000044044) #34 TXNDC12 (ENSPPAG00000044043) #36 ENSPPAG00000042598 Chimpanzee MODERN SPECIES CYP4Z1 (ENSPTRG00000000707) ENSPTRG00000000708 PDZK1IP1 (ENSPTRG00000000709) TAL1 (ENSPTRG00000051380) STIL (ENSPTRG00000000711) CMPK1 (ENSPTRG00000000712) FOXE3 (ENSPTRG00000030618) FOXD2 (ENSPTRG00000030617) TRABD2B (ENSPTRG00000052213) #7 ENSPTRG00000043073 SLC5A9 (ENSPTRG00000000716) #9 ENSPTRG00000048491 SPATA6 (ENSPTRG00000000718) #11 AGBL4 (ENSPTRG00000043865) #12 BEND5 (ENSPTRG00000000721) #13 ELAVL4 (ENSPTRG00000000723) #22 ENSPTRG00000051295 ENSPTRG00000051047 DMRTA2 (ENSPTRG00000000724) #23 FAF1 (ENSPTRG00000000725) #24 CDKN2C (ENSPTRG00000000726) #25 C1H1orf185 (ENSPTRG00000030611) #27 ENSPTRG00000046419 RNF11 (ENSPTRG00000041089) #28 TTC39A (ENSPTRG00000000728) #29 EPS15 (ENSPTRG00000000729) #30 OSBPL9 (ENSPTRG00000000730) #32 NRDC (ENSPTRG00000000731) #33 RAB3B (ENSPTRG00000000732) #34 TXNDC12 (ENSPTRG00000000733) #36 BTF3L4 (ENSPTRG00000000735) #37 Orangutan MODERN SPECIES CYP4B1 (ENSPPYG00000001387) CYP4A22 (ENSPPYG00000001385) CYP4X1 (ENSPPYG00000001384) CYP4Z1 (ENSPPYG00000001386) PDZK1IP1 (ENSPPYG00000001383) ENSPPYG00000035408 STIL (ENSPPYG00000001381) CMPK1 (ENSPPYG00000001380) FOXD2 (ENSPPYG00000001378) TRABD2B (ENSPPYG00000001376) #7 SLC5A9 (ENSPPYG00000001373) #9 SPATA6 (ENSPPYG00000001372) #11 BEND5 (ENSPPYG00000001371) #13 ENSPPYG00000038734 AGBL4 (ENSPPYG00000001368) #12 ELAVL4 (ENSPPYG00000001367) #22 DMRTA2 (ENSPPYG00000001366) #23 FAF1 (ENSPPYG00000029417) #24 CDKN2C (ENSPPYG00000001365) #25 C1orf185 (ENSPPYG00000001364) #27 ENSPPYG00000039022 ENSPPYG00000001362 RNF11 (ENSPPYG00000040291) #28 TTC39A (ENSPPYG00000001360) #29 EPS15 (ENSPPYG00000001359) #30 OSBPL9 (ENSPPYG00000001358) #32 NRDC (ENSPPYG00000001357) #33 RAB3B (ENSPPYG00000040594) #34 TXNDC12 (ENSPPYG00000001354) #36 BTF3L4 (ENSPPYG00000001353) #37 ENSPPYG00000033286 Gibbon MODERN SPECIES 2 ENSNLEG00000030967 TEX38 (ENSNLEG00000016440) EFCAB14 (ENSNLEG00000016421) ENSNLEG00000016409 PDZK1IP1 (ENSNLEG00000016402) ENSNLEG00000027215 STIL (ENSNLEG00000016386) ENSNLEG00000016374 ENSNLEG00000016372 #7 ENSNLEG00000034414 SLC5A9 (ENSNLEG00000016351) #9 ENSNLEG00000036336 SPATA6 (ENSNLEG00000016340) #11 AGBL4 (ENSNLEG00000016327) #12 BEND5 (ENSNLEG00000033925) #13 ELAVL4 (ENSNLEG00000016303) #22 ENSNLEG00000032288 ENSNLEG00000027959 #23 FAF1 (ENSNLEG00000016263) #24 CDKN2C (ENSNLEG00000016259) #25 ENSNLEG00000029189 ENSNLEG00000033471 TTC39A (ENSNLEG00000016232) #29 ENSNLEG00000016192 #30 OSBPL9 (ENSNLEG00000016138) #32 NRDC (ENSNLEG00000016067) #33 RAB3B (ENSNLEG00000016065) #34 TXNDC12 (ENSNLEG00000034609) #36 BTF3L4 (ENSNLEG00000016041) #37 ENSNLEG00000016013 STX6 (ENSNLEG00000016021) Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000155173 ENSGT00940000160927.e ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 ENSGT00940000154690.ub.b #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 Rhinopithecus ANCESTRAL SPECIES 703 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 Golden snub-nosed monkey MODERN SPECIES 809 ELAVL4 (ENSRROG00000044786) #22 ENSRROG00000039410 ENSRROG00000045215 DMRTA2 (ENSRROG00000013168) #23 FAF1 (ENSRROG00000035565) #24 Black snub-nosed monkey MODERN SPECIES 449 ELAVL4 (ENSRBIG00000043810) #22 ENSRBIG00000030797 ENSRBIG00000031795 DMRTA2 (ENSRBIG00000031089) #23 FAF1 (ENSRBIG00000033052) #24 ENSRBIG00000029162 ADCYAP1 (ENSRBIG00000033794) ENSRBIG00000040234 ENOSF1 (ENSRBIG00000034196) TYMS (ENSRBIG00000040749) CLUL1 (ENSRBIG00000030751) CETN1 (ENSRBIG00000006152) COLEC12 (ENSRBIG00000032206) THOC1 (ENSRBIG00000033738) USP14 (ENSRBIG00000044842) ROCK1 (ENSRBIG00000028817) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000160927.e ENSGT00940000163504.d ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 ENSGT00940000154690.ub.b #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296.jb.a #37 Vervet Monkey MODERN SPECIES 12 CYP4A22 (ENSCSAG00000001245) ENSCSAG00000000142 PDZK1IP1 (ENSCSAG00000001246) TAL1 (ENSCSAG00000001247) STIL (ENSCSAG00000001248) CMPK1 (ENSCSAG00000001249) FOXE3 (ENSCSAG00000000143) FOXD2 (ENSCSAG00000000144) TRABD2B (ENSCSAG00000001250) #7 ENSCSAG00000001251 ENSCSAG00000001252 SLC5A9 (ENSCSAG00000001253) #9 SPATA6 (ENSCSAG00000001254) #11 ENSCSAG00000001255 #12 BEND5 (ENSCSAG00000001256) #13 ELAVL4 (ENSCSAG00000001257) #22 ENSCSAG00000001258 DMRTA2 (ENSCSAG00000001259) #23 FAF1 (ENSCSAG00000001260) #24 CDKN2C (ENSCSAG00000001261) #25 C1orf185 (ENSCSAG00000001262) #27 RNF11 (ENSCSAG00000001264) #28 TTC39A (ENSCSAG00000001265) #29 EPS15 (ENSCSAG00000001266) #30 OSBPL9 (ENSCSAG00000001267) #32 NRDC (ENSCSAG00000001268) #33 RAB3B (ENSCSAG00000001269) #34 TXNDC12 (ENSCSAG00000001270) #36 BTF3L4 (ENSCSAG00000001271) #37 ENSCSAG00000001272 ZFYVE9 (ENSCSAG00000001273) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000163504.c.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00910000146631 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 Macaca ANCESTRAL SPECIES ENSGT00940000163504.c.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589.g.b ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00910000146631 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690.ub.b #32 ENSGT00940000155026 #33 Macaca_a ANCESTRAL SPECIES ENSGT00940000163504.c.b ENSGT00940000160927.e ENSGT00940000163504.c.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589.h ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.b.b.d ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT01030000238095.a.a.b.b ENSGT00940000163721 ENSGT00950000182917.a.b.a #29 ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 ENSGT00940000154690.ub.b #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00980000202150.b Crab-eating macaque MODERN SPECIES CYP4A11 (ENSMFAG00000032544) CYP4X1 (ENSMFAG00000000631) CYP4A45P (ENSMFAG00000042796) PDZK1IP1 (ENSMFAG00000002324) TAL1 (ENSMFAG00000047639) ENSMFAG00000063835 STIL (ENSMFAG00000024408) ENSMFAG00000035854 TRABD2B (ENSMFAG00000003902) #7 ENSMFAG00000003658 ENSMFAG00000049065 SLC5A9 (ENSMFAG00000035463) #9 ENSMFAG00000051495 ENSMFAG00000030500 AGBL4 (ENSMFAG00000032630) #12 ELAVL4 (ENSMFAG00000039866) #22 ENSMFAG00000020472 DMRTA2 (ENSMFAG00000062675) #23 FAF1 (ENSMFAG00000031563) #24 CDKN2C (ENSMFAG00000024172) #25 C1orf185 (ENSMFAG00000000049) #27 ENSMFAG00000003545 ENSMFAG00000047249 ENSMFAG00000003664 TTC39A (ENSMFAG00000037823) #29 ENSMFAG00000053090 ENSMFAG00000038258 EPS15 (ENSMFAG00000044060) #30 OSBPL9 (ENSMFAG00000043512) #32 NRDC (ENSMFAG00000036148) #33 RAB3B (ENSMFAG00000056941) #34 Rhesus MODERN SPECIES CYP4A45 (ENSMMUG00000019871) CYP4X1 (ENSMMUG00000018867) CYP4A11 (ENSMMUG00000032143) PDZK1IP1 (ENSMMUG00000061850) STIL (ENSMMUG00000020389) CMPK1 (ENSMMUG00000017375) FOXE3 (ENSMMUG00000064635) FOXD2 (ENSMMUG00000018556) ENSMMUG00000057159 TRABD2B (ENSMMUG00000032139) #7 ENSMMUG00000049296 SLC5A9 (ENSMMUG00000007558) #9 SPATA6 (ENSMMUG00000009282) #11 ENSMMUG00000056990 BEND5 (ENSMMUG00000008828) #12 ELAVL4 (ENSMMUG00000021933) #22 DMRTA2 (ENSMMUG00000052908) #23 FAF1 (ENSMMUG00000019056) #24 CDKN2C (ENSMMUG00000019057) #25 C1H1orf185 (ENSMMUG00000006651) #27 ENSMMUG00000058388 RNF11 (ENSMMUG00000012112) TTC39A (ENSMMUG00000004564) #29 ENSMMUG00000058438 ENSMMUG00000043311 EPS15 (ENSMMUG00000012055) #30 OSBPL9 (ENSMMUG00000004735) #32 NRDC (ENSMMUG00000004738) #33 ENSMMUG00000047290 RAB3B (ENSMMUG00000014035) #34 ENSMMUG00000061924 Pig-tailed macaque MODERN SPECIES 217 ENSMNEG00000026248 PDZK1IP1 (ENSMNEG00000034766) TAL1 (ENSMNEG00000043031) STIL (ENSMNEG00000044743) CMPK1 (ENSMNEG00000037131) FOXE3 (ENSMNEG00000009558) FOXD2 (ENSMNEG00000024922) TRABD2B (ENSMNEG00000028952) #7 ENSMNEG00000023828 ENSMNEG00000042343 SLC5A9 (ENSMNEG00000028284) #9 SPATA6 (ENSMNEG00000036437) #11 AGBL4 (ENSMNEG00000028894) #12 BEND5 (ENSMNEG00000030902) #13 ENSMNEG00000030170 ELAVL4 (ENSMNEG00000035576) #22 ENSMNEG00000021112 ENSMNEG00000014551 ENSMNEG00000029667 DMRTA2 (ENSMNEG00000036377) #23 FAF1 (ENSMNEG00000029437) #24 CDKN2C (ENSMNEG00000031706) #25 ENSMNEG00000039144 ENSMNEG00000042352 C1orf185 (ENSMNEG00000034636) #27 ENSMNEG00000043444 RNF11 (ENSMNEG00000044248) #28 TTC39A (ENSMNEG00000043223) #29 EPS15 (ENSMNEG00000032927) #30 ENSMNEG00000044016 OSBPL9 (ENSMNEG00000045152) #32 Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00940000160927.e ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00910000146631 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 Cercopithecinae_d ANCESTRAL SPECIES 19 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00910000146631 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 #27 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 Sooty mangabey MODERN SPECIES 357 ENSCATG00000037935 #13 ENSCATG00000033836 ENSCATG00000037973 #12 ELAVL4 (ENSCATG00000029867) #22 ENSCATG00000043475 ENSCATG00000036372 ENSCATG00000033016 DMRTA2 (ENSCATG00000036373) #23 FAF1 (ENSCATG00000006210) #24 ENSCATG00000030251 CDKN2C (ENSCATG00000028763) #25 C1orf185 (ENSCATG00000035564) #27 ENSCATG00000033774 RNF11 (ENSCATG00000015957) #28 TTC39A (ENSCATG00000037731) #29 ENSCATG00000040273 ENSCATG00000034910 EPS15 (ENSCATG00000040033) #30 Drill MODERN SPECIES 285 ENSMLEG00000035489 ELAVL4 (ENSMLEG00000028616) #22 ENSMLEG00000026564 ENSMLEG00000032385 ENSMLEG00000003360 DMRTA2 (ENSMLEG00000021929) #23 FAF1 (ENSMLEG00000028226) #24 Olive baboon MODERN SPECIES ENSPANG00000039694 ENSPANG00000044971 PDZK1IP1 (ENSPANG00000035359) TAL1 (ENSPANG00000009893) STIL (ENSPANG00000020258) CMPK1 (ENSPANG00000019968) FOXE3 (ENSPANG00000011983) FOXD2 (ENSPANG00000017227) TRABD2B (ENSPANG00000012233) #7 ENSPANG00000001010 ENSPANG00000011532 ENSPANG00000005788 ENSPANG00000021593 SPATA6 (ENSPANG00000014017) #11 AGBL4 (ENSPANG00000034366) #12 ELAVL4 (ENSPANG00000017754) #22 ENSPANG00000033296 DMRTA2 (ENSPANG00000012592) #23 FAF1 (ENSPANG00000015883) #24 CDKN2C (ENSPANG00000035708) #25 C1orf185 (ENSPANG00000005045) #27 ENSPANG00000029418 RNF11 (ENSPANG00000019410) #28 TTC39A (ENSPANG00000018680) #29 EPS15 (ENSPANG00000002942) #30 ENSPANG00000032379 ENSPANG00000039561 OSBPL9 (ENSPANG00000005884) #32 NRDC (ENSPANG00000017224) #33 RAB3B (ENSPANG00000018024) #34 TXNDC12 (ENSPANG00000024234) #36 Platyrrhini ANCESTRAL SPECIES ENSGT00940000163504 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296.kb #37 ENSGT00940000154295.y.a.a.b ENSGT00940000154290.a ENSGT00390000013722.ab Cebidae ANCESTRAL SPECIES 1 ENSGT00940000163504 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296.kb #37 ENSGT00940000154290.a ENSGT00390000013722.ab ENSGT00390000009595.a Marmoset MODERN SPECIES 19 ENSCJAG00000062966 ENSCJAG00000083949 PDZK1IP1 (ENSCJAG00000046011) TAL1 (ENSCJAG00000053562) STIL (ENSCJAG00000021228) CMPK1 (ENSCJAG00000021250) FOXE3 (ENSCJAG00000038878) FOXD2 (ENSCJAG00000021263) ENSCJAG00000071656 TRABD2B (ENSCJAG00000042725) #7 SLC5A9 (ENSCJAG00000021271) #9 SPATA6 (ENSCJAG00000039778) #11 ENSCJAG00000081866 BEND5 (ENSCJAG00000021284) #13 ENSCJAG00000078422 ELAVL4 (ENSCJAG00000013725) #22 FAF1 (ENSCJAG00000021555) #24 DMRTA2 (ENSCJAG00000041134) #23 CDKN2C (ENSCJAG00000060144) #25 ENSCJAG00000076266 ENSCJAG00000081094 C1orf185 (ENSCJAG00000021565) #27 ENSCJAG00000077996 RNF11 (ENSCJAG00000071727) #28 TTC39A (ENSCJAG00000021569) #29 EPS15 (ENSCJAG00000021570) #30 ENSCJAG00000071627 ENSCJAG00000038925 ENSCJAG00000071526 OSBPL9 (ENSCJAG00000021574) #32 NRDC (ENSCJAG00000021578) #33 Cebidae_a ANCESTRAL SPECIES ENSGT00940000163504 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296.kb #37 ENSGT00940000154290.a ENSGT00390000013722.ab ENSGT00390000009595.a Capuchin MODERN SPECIES 214 ENSCCAG00000027782 #12 ELAVL4 (ENSCCAG00000024797) #22 DMRTA2 (ENSCCAG00000026118) #23 FAF1 (ENSCCAG00000024129) #24 ENSCCAG00000027169 CDKN2C (ENSCCAG00000020423) #25 ENSCCAG00000020651 ENSCCAG00000024446 C1orf185 (ENSCCAG00000035941) #27 RNF11 (ENSCCAG00000021392) #28 TTC39A (ENSCCAG00000029112) #29 EPS15 (ENSCCAG00000020337) #30 ENSCCAG00000022769 #32 NRDC (ENSCCAG00000035997) #33 RAB3B (ENSCCAG00000035544) #34 TXNDC12 (ENSCCAG00000021353) #36 BTF3L4 (ENSCCAG00000034219) #37 Bolivian squirrel monkey MODERN SPECIES 45 ENSSBOG00000033087 CHD2 (ENSSBOG00000023754) RGMA (ENSSBOG00000023291) MCTP2 (ENSSBOG00000029271) NR2F2 (ENSSBOG00000020466) ENSSBOG00000035852 PDZK1IP1 (ENSSBOG00000033779) STIL (ENSSBOG00000035433) CMPK1 (ENSSBOG00000023132) TRABD2B (ENSSBOG00000021713) #7 SLC5A9 (ENSSBOG00000031062) #9 ENSSBOG00000034864 SPATA6 (ENSSBOG00000026364) #11 BEND5 (ENSSBOG00000015358) #13 AGBL4 (ENSSBOG00000031864) #12 ELAVL4 (ENSSBOG00000022965) #22 DMRTA2 (ENSSBOG00000025121) #23 ENSSBOG00000029666 ENSSBOG00000035179 ENSSBOG00000031899 ENSSBOG00000024407 ENSSBOG00000021083 FAF1 (ENSSBOG00000035904) #24 CDKN2C (ENSSBOG00000035100) #25 C1orf185 (ENSSBOG00000034584) #27 RNF11 (ENSSBOG00000029247) #28 TTC39A (ENSSBOG00000034095) #29 EPS15 (ENSSBOG00000021478) #30 OSBPL9 (ENSSBOG00000022113) #32 ENSSBOG00000000079 #33 RAB3B (ENSSBOG00000011518) #34 Mas night monkey MODERN SPECIES 679 CYP4A11 (ENSANAG00000019404) ENSANAG00000035850 CYP4X1 (ENSANAG00000034247) CYP4Z1 (ENSANAG00000032825) PDZK1IP1 (ENSANAG00000037310) TAL1 (ENSANAG00000018338) STIL (ENSANAG00000025280) CMPK1 (ENSANAG00000033187) FOXE3 (ENSANAG00000019840) TRABD2B (ENSANAG00000036722) #7 SLC5A9 (ENSANAG00000022766) #9 SPATA6 (ENSANAG00000033722) #11 BEND5 (ENSANAG00000018794) #13 AGBL4 (ENSANAG00000022272) #12 ENSANAG00000031055 ELAVL4 (ENSANAG00000030598) #22 DMRTA2 (ENSANAG00000033164) #23 ENSANAG00000022650 ENSANAG00000028980 ENSANAG00000028849 FAF1 (ENSANAG00000033702) #24 ENSANAG00000023034 ENSANAG00000037373 CDKN2C (ENSANAG00000033643) #25 ENSANAG00000031477 ENSANAG00000037551 C1orf185 (ENSANAG00000033385) #27 ENSANAG00000035696 #28 TTC39A (ENSANAG00000035053) #29 EPS15 (ENSANAG00000022229) #30 OSBPL9 (ENSANAG00000027048) #32 Tarsier MODERN SPECIES 1032 ELAVL4 (ENSTSYG00000004130) #22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000157399 #22 Common shrew MODERN SPECIES 11422 ELAVL4 (ENSSARG00000010733) #22 Hedgehog MODERN SPECIES 15759 ELAVL4 (ENSEEUG00000008766) #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Suina ANCESTRAL SPECIES 27 ENSGT00940000155173.g.b ENSGT00940000154660.b.d.b ENSGT00940000155173.g.a ENSGT00940000160927 ENSGT00940000154660.b.c ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Pig MODERN SPECIES 14 ENSSSCG00000031778 ENSSSCG00000056639 ENSSSCG00000020872 TAL1 (ENSSSCG00000058056) STIL (ENSSSCG00000003888) CMPK1 (ENSSSCG00000003885) FOXE3 (ENSSSCG00000003884) FOXD2 (ENSSSCG00000034880) TRABD2B (ENSSSCG00000037318) #7 SLC5A9 (ENSSSCG00000003882) #9 SPATA6 (ENSSSCG00000003881) #11 ENSSSCG00000031300 #12 BEND5 (ENSSSCG00000063412) #13 ENSSSCG00000049367 ENSSSCG00000052381 ELAVL4 (ENSSSCG00000037291) #22 DMRTA2 (ENSSSCG00000030552) #23 ENSSSCG00000049732 FAF1 (ENSSSCG00000003877) #24 CDKN2C (ENSSSCG00000003876) #25 C1orf185 (ENSSSCG00000031188) #27 RNF11 (ENSSSCG00000031172) #28 TTC39A (ENSSSCG00000003875) #29 ENSSSCG00000055459 EPS15 (ENSSSCG00000003872) #30 ENSSSCG00000059473 #31 OSBPL9 (ENSSSCG00000021292) #32 ENSSSCG00000058239 NRDC (ENSSSCG00000003870) #33 RAB3B (ENSSSCG00000021036) #34 KTI12 (ENSSSCG00000046753) Chacoan peccary MODERN SPECIES 54 ENSCWAG00000007884 ENSCWAG00000007782 ENSCWAG00000007685 ENSCWAG00000007625 ENSCWAG00000007601 TAL1 (ENSCWAG00000007586) STIL (ENSCWAG00000007144) CMPK1 (ENSCWAG00000007073) FOXE3 (ENSCWAG00000007053) FOXD2 (ENSCWAG00000007046) TRABD2B (ENSCWAG00000007013) #7 SLC5A9 (ENSCWAG00000006856) #9 SPATA6 (ENSCWAG00000006748) #11 BEND5 (ENSCWAG00000006694) #13 AGBL4 (ENSCWAG00000006528) #12 ELAVL4 (ENSCWAG00000005560) #22 DMRTA2 (ENSCWAG00000005466) #23 FAF1 (ENSCWAG00000005411) #24 CDKN2C (ENSCWAG00000005386) #25 C1orf185 (ENSCWAG00000005324) #27 RNF11 (ENSCWAG00000005303) #28 TTC39A (ENSCWAG00000004869) #29 EPS15 (ENSCWAG00000004768) #30 ENSCWAG00000004705 #31 OSBPL9 (ENSCWAG00000004180) #32 NRDC (ENSCWAG00000003843) #33 RAB3B (ENSCWAG00000003795) #34 ENSCWAG00000003778 #35 TXNDC12 (ENSCWAG00000003757) #36 BTF3L4 (ENSCWAG00000003727) #37 ZFYVE9 (ENSCWAG00000003673) Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000153288.b ENSGT00390000002443 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Cetacea ANCESTRAL SPECIES ENSGT00950000182958.a.b.b.j.l ENSGT00940000155173.i.a ENSGT00940000160927 ENSGT00940000155173.j ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000166653 Odontoceti ANCESTRAL SPECIES ENSGT00940000155173.j ENSGT00940000160927 ENSGT00940000155173.i.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000155339.r ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000166653 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000155173.i.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000153412.A.a.c.e.b ENSGT00940000161273 #7 ENSGT00940000155339.r ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000158435.j Dolphin MODERN SPECIES 2874 ENSTTRG00000012352 SLC5A9 (ENSTTRG00000012358) #9 SPATA6 (ENSTTRG00000012366) #11 AGBL4 (ENSTTRG00000012384) #12 BEND5 (ENSTTRG00000012397) #13 ELAVL4 (ENSTTRG00000012441) #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000161441.c.b.a ENSGT00940000163504 ENSGT00940000155173.i.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000155339.r ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000158435.j Monodontidae ANCESTRAL SPECIES ENSGT00940000161441.c.b.a ENSGT00940000163504 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000153412.A.a.c.e.b ENSGT00940000161273 #7 ENSGT00940000155339.r ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Narwhal MODERN SPECIES 304 ENSMMNG00015017646 PDZK1IP1 (ENSMMNG00015017600) TAL1 (ENSMMNG00015017573) STIL (ENSMMNG00015017497) CMPK1 (ENSMMNG00015017341) FOXE3 (ENSMMNG00015017301) FOXD2 (ENSMMNG00015017290) ENSMMNG00015017274 TRABD2B (ENSMMNG00015017248) #7 ENSMMNG00015017223 SLC5A9 (ENSMMNG00015017189) #9 SPATA6 (ENSMMNG00015017114) #11 BEND5 (ENSMMNG00015017067) #13 ENSMMNG00015017042 AGBL4 (ENSMMNG00015016854) #12 ELAVL4 (ENSMMNG00015016468) #22 DMRTA2 (ENSMMNG00015016305) #23 FAF1 (ENSMMNG00015016261) #24 CDKN2C (ENSMMNG00015016226) #25 ENSMMNG00015016200 RNF11 (ENSMMNG00015016177) #28 TTC39A (ENSMMNG00015015942) #29 EPS15 (ENSMMNG00015015790) #30 ENSMMNG00015015722 #31 OSBPL9 (ENSMMNG00015015491) #32 NRDC (ENSMMNG00015015338) #33 ENSMMNG00015015285 RAB3B (ENSMMNG00015015267) #34 ENSMMNG00015015254 #35 TXNDC12 (ENSMMNG00015015235) #36 BTF3L4 (ENSMMNG00015015217) #37 Beluga whale MODERN SPECIES 74 TAL1 (ENSDLEG00000014787) STIL (ENSDLEG00000014810) CMPK1 (ENSDLEG00000014989) FOXE3 (ENSDLEG00000015041) FOXD2 (ENSDLEG00000015047) ENSDLEG00000015052 TRABD2B (ENSDLEG00000015057) #7 ENSDLEG00000015069 ENSDLEG00000015073 SLC5A9 (ENSDLEG00000015091) #9 SPATA6 (ENSDLEG00000015119) #11 AGBL4 (ENSDLEG00000015168) #12 BEND5 (ENSDLEG00000015199) #13 ENSDLEG00000015227 ENSDLEG00000015238 #12 ELAVL4 (ENSDLEG00000015258) #22 DMRTA2 (ENSDLEG00000016008) #23 FAF1 (ENSDLEG00000016028) #24 CDKN2C (ENSDLEG00000016125) #25 C1orf185 (ENSDLEG00000016132) #27 RNF11 (ENSDLEG00000016174) #28 TTC39A (ENSDLEG00000016187) #29 EPS15 (ENSDLEG00000016250) #30 ENSDLEG00000016334 #31 OSBPL9 (ENSDLEG00000016465) #32 NRDC (ENSDLEG00000017921) #33 ENSDLEG00000018017 RAB3B (ENSDLEG00000018039) #34 TXNDC12 (ENSDLEG00000018054) #36 ENSDLEG00000018063 #35 BTF3L4 (ENSDLEG00000018068) #37 Vaquita MODERN SPECIES ENSPSNG00000008499 PDZK1IP1 (ENSPSNG00000008584) TAL1 (ENSPSNG00000008617) STIL (ENSPSNG00000008673) CMPK1 (ENSPSNG00000008760) FOXE3 (ENSPSNG00000008840) FOXD2 (ENSPSNG00000008853) TRABD2B (ENSPSNG00000008890) #7 ENSPSNG00000008955 ENSPSNG00000008987 SLC5A9 (ENSPSNG00000009041) #9 SPATA6 (ENSPSNG00000009229) #11 AGBL4 (ENSPSNG00000009355) #12 BEND5 (ENSPSNG00000009518) #13 ENSPSNG00000009540 ELAVL4 (ENSPSNG00000009710) #22 DMRTA2 (ENSPSNG00000010437) #23 FAF1 (ENSPSNG00000010473) #24 CDKN2C (ENSPSNG00000010560) #25 ENSPSNG00000010600 C1orf185 (ENSPSNG00000010619) #27 RNF11 (ENSPSNG00000010799) #28 TTC39A (ENSPSNG00000010892) #29 EPS15 (ENSPSNG00000011562) #30 ENSPSNG00000011761 #32 NRDC (ENSPSNG00000012358) #33 ENSPSNG00000012757 RAB3B (ENSPSNG00000012890) #34 TXNDC12 (ENSPSNG00000012967) #36 ENSPSNG00000013037 #35 BTF3L4 (ENSPSNG00000013083) #37 Sperm whale MODERN SPECIES 15 ENSPCTG00005009447 BTF3L4 (ENSPCTG00005009786) #37 TXNDC12 (ENSPCTG00005009903) #36 ENSPCTG00005010014 #35 RAB3B (ENSPCTG00005010036) #34 NRDC (ENSPCTG00005010107) #33 OSBPL9 (ENSPCTG00005010621) #32 ENSPCTG00005011404 #31 EPS15 (ENSPCTG00005011544) #30 TTC39A (ENSPCTG00005011838) #29 RNF11 (ENSPCTG00005012191) #28 ENSPCTG00005012230 CDKN2C (ENSPCTG00005012278) #25 FAF1 (ENSPCTG00005012310) #24 ENSPCTG00005012390 #12 ELAVL4 (ENSPCTG00005012489) #22 ENSPCTG00005013384 ENSPCTG00005013401 BEND5 (ENSPCTG00005013421) #13 AGBL4 (ENSPCTG00005013528) #12 SPATA6 (ENSPCTG00005013649) #11 SLC5A9 (ENSPCTG00005013780) #9 ENSPCTG00005014378 ENSPCTG00005014432 FOXE3 (ENSPCTG00005014461) CMPK1 (ENSPCTG00005014484) STIL (ENSPCTG00005014632) TAL1 (ENSPCTG00005014754) PDZK1IP1 (ENSPCTG00005014810) ENSPCTG00005014892 ENSPCTG00005015607 Blue whale MODERN SPECIES ENSBMSG00010005002 ENSBMSG00010005028 ENSBMSG00010005054 PDZK1IP1 (ENSBMSG00010005121) TAL1 (ENSBMSG00010005132) STIL (ENSBMSG00010005150) CMPK1 (ENSBMSG00010005177) FOXE3 (ENSBMSG00010005194) ENSBMSG00010005215 TRABD2B (ENSBMSG00010005224) #7 SLC5A9 (ENSBMSG00010005258) #9 SPATA6 (ENSBMSG00010005335) #11 AGBL4 (ENSBMSG00010005358) #12 BEND5 (ENSBMSG00010005413) #13 ENSBMSG00010005423 ELAVL4 (ENSBMSG00010005482) #22 DMRTA2 (ENSBMSG00010005622) #23 FAF1 (ENSBMSG00010005636) #24 CDKN2C (ENSBMSG00010005658) #25 C1orf185 (ENSBMSG00010005668) #27 RNF11 (ENSBMSG00010005680) #28 TTC39A (ENSBMSG00010005702) #29 EPS15 (ENSBMSG00010005767) #30 ENSBMSG00010005842 #32 NRDC (ENSBMSG00010005952) #33 RAB3B (ENSBMSG00010005996) #34 TXNDC12 (ENSBMSG00010006006) #36 ENSBMSG00010006017 #35 ENSBMSG00010006025 ENSBMSG00010006038 ZFYVE9 (ENSBMSG00010006063) Pecora ANCESTRAL SPECIES 2 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Percora_a ANCESTRAL SPECIES 1 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Bovidae ANCESTRAL SPECIES 1 ENSGT00940000155173.k.b ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Caprinae ANCESTRAL SPECIES 2 ENSGT00940000155173.k.a.a.b.a.d ENSGT00940000155173.k.b ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Goat MODERN SPECIES 22 CYP4A42 (ENSCHIG00000025289) CYP4X1 (ENSCHIG00000017002) PDZK1IP1 (ENSCHIG00000010100) TAL1 (ENSCHIG00000023704) STIL (ENSCHIG00000018306) CMPK1 (ENSCHIG00000009857) FOXE3 (ENSCHIG00000005171) FOXD2 (ENSCHIG00000000964) ENSCHIG00000008212 TRABD2B (ENSCHIG00000016346) #7 ENSCHIG00000016345 SLC5A9 (ENSCHIG00000008499) #9 SPATA6 (ENSCHIG00000022098) #11 ENSCHIG00000002488 #12 BEND5 (ENSCHIG00000021731) #13 ELAVL4 (ENSCHIG00000002038) #22 DMRTA2 (ENSCHIG00000014219) #23 FAF1 (ENSCHIG00000023469) #24 CDKN2C (ENSCHIG00000018497) #25 C1orf185 (ENSCHIG00000024707) #27 RNF11 (ENSCHIG00000015466) #28 TTC39A (ENSCHIG00000004432) #29 EPS15 (ENSCHIG00000014467) #30 ENSCHIG00000011084 #31 ENSCHIG00000026722 #32 NRDC (ENSCHIG00000018703) #33 ENSCHIG00000015938 RAB3B (ENSCHIG00000018985) #34 TXNDC12 (ENSCHIG00000021386) #36 ENSCHIG00000000766 #37 ZFYVE9 (ENSCHIG00000027153) Bovinae ANCESTRAL SPECIES 1 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831.q.a #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00960000192687 ENSGT00940000154690.q #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a American bison MODERN SPECIES 2971 CYP4X1 (ENSBBBG00000008137) ENSBBBG00000009802 PDZK1IP1 (ENSBBBG00000009801) ENSBBBG00000001633 STIL (ENSBBBG00000001632) CMPK1 (ENSBBBG00000009782) TRABD2B (ENSBBBG00000009775) #7 ENSBBBG00000009768 ENSBBBG00000009765 ENSBBBG00000009039 SLC5A9 (ENSBBBG00000009762) #9 SPATA6 (ENSBBBG00000009751) #11 AGBL4 (ENSBBBG00000009737) #12 BEND5 (ENSBBBG00000009734) #13 ENSBBBG00000001599 ELAVL4 (ENSBBBG00000009727) #22 FAF1 (ENSBBBG00000009713) #24 CDKN2C (ENSBBBG00000009704) #25 Bos ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00960000192687 ENSGT00940000154690.q #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Bos_a ANCESTRAL SPECIES 1 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00990000203553.c.a.a.a.b ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00960000192687 ENSGT00940000154690.q #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Wild yak MODERN SPECIES 676 ENSBMUG00000015327 #11 ENSBMUG00000015342 #11 AGBL4 (ENSBMUG00000015405) #12 BEND5 (ENSBMUG00000015425) #13 ENSBMUG00000015436 ENSBMUG00000015445 ELAVL4 (ENSBMUG00000015604) #22 DMRTA2 (ENSBMUG00000015624) #23 FAF1 (ENSBMUG00000015674) #24 CDKN2C (ENSBMUG00000015705) #25 C1orf185 (ENSBMUG00000015719) #27 RNF11 (ENSBMUG00000015733) #28 TTC39A (ENSBMUG00000015807) #29 EPS15 (ENSBMUG00000016038) #30 ENSBMUG00000016376 #32 ENSBMUG00000016543 NRDC (ENSBMUG00000016703) #33 RAB3B (ENSBMUG00000016730) #34 TXNDC12 (ENSBMUG00000016772) #36 ENSBMUG00000016784 ENSBMUG00000016800 ZFYVE9 (ENSBMUG00000016829) Domestic yak MODERN SPECIES 22 ENSBGRG00000000946 CYP4X1 (ENSBGRG00000000906) PDZK1IP1 (ENSBGRG00000000884) TAL1 (ENSBGRG00000000873) STIL (ENSBGRG00000000847) CMPK1 (ENSBGRG00000000768) FOXD2 (ENSBGRG00000000734) TRABD2B (ENSBGRG00000000715) #7 ENSBGRG00000000659 ENSBGRG00000000634 SLC5A9 (ENSBGRG00000000471) #9 ENSBGRG00000000443 SPATA6 (ENSBGRG00000000361) #11 ENSBGRG00000000329 BEND5 (ENSBGRG00000000244) #13 ELAVL4 (ENSBGRG00000008303) #22 ENSBGRG00000008263 DMRTA2 (ENSBGRG00000008234) #23 ENSBGRG00000008184 FAF1 (ENSBGRG00000007790) #24 CDKN2C (ENSBGRG00000007727) #25 ENSBGRG00000007699 ENSBGRG00000007678 C1orf185 (ENSBGRG00000007509) #27 ENSBGRG00000007489 RNF11 (ENSBGRG00000007453) #28 TTC39A (ENSBGRG00000006890) #29 EPS15 (ENSBGRG00000006427) #30 ENSBGRG00000004997 #32 NRDC (ENSBGRG00000004115) #33 RAB3B (ENSBGRG00000004067) #34 Bos_b ANCESTRAL SPECIES 1 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690.q #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.a.b.b.a ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Hybrid Bos Indicus MODERN SPECIES 22 ENSBIXG00005012345 CYP4X1 (ENSBIXG00005012436) PDZK1IP1 (ENSBIXG00005012472) TAL1 (ENSBIXG00005001347) STIL (ENSBIXG00005001365) CMPK1 (ENSBIXG00005012554) FOXE3 (ENSBIXG00005012567) TRABD2B (ENSBIXG00005012610) #7 ENSBIXG00005012658 SLC5A9 (ENSBIXG00005012722) #9 ENSBIXG00005012739 SPATA6 (ENSBIXG00005012777) #11 BEND5 (ENSBIXG00005012833) #13 ENSBIXG00005001430 AGBL4 (ENSBIXG00005012945) #12 ELAVL4 (ENSBIXG00005013087) #22 ENSBIXG00005013121 DMRTA2 (ENSBIXG00005013129) #23 ENSBIXG00005013142 ENSBIXG00005013185 #24 CDKN2C (ENSBIXG00005013218) #25 C1orf185 (ENSBIXG00005013246) #27 RNF11 (ENSBIXG00005013258) #28 TTC39A (ENSBIXG00005013555) #29 EPS15 (ENSBIXG00005013837) #30 OSBPL9 (ENSBIXG00005014176) #32 ENSBIXG00005014220 NRDC (ENSBIXG00005014778) #33 RAB3B (ENSBIXG00005014889) #34 ENSBIXG00005014899 TXNDC12 (ENSBIXG00005002157) #36 Cow MODERN SPECIES 22 PDZK1IP1 (ENSBTAG00000002555) TAL1 (ENSBTAG00000005029) STIL (ENSBTAG00000017844) CMPK1 (ENSBTAG00000019956) FOXE3 (ENSBTAG00000051575) FOXD2 (ENSBTAG00000045643) TRABD2B (ENSBTAG00000054324) #7 SKINT1 (ENSBTAG00000009192) ENSBTAG00000054583 SLC5A9 (ENSBTAG00000014225) #9 SPATA6 (ENSBTAG00000003128) #11 ENSBTAG00000012722 #12 BEND5 (ENSBTAG00000009209) #13 ENSBTAG00000053607 ENSBTAG00000054981 #12 ELAVL4 (ENSBTAG00000021046) #22 DMRTA2 (ENSBTAG00000010414) #23 FAF1 (ENSBTAG00000014482) #24 CDKN2C (ENSBTAG00000011059) #25 C3H1orf185 (ENSBTAG00000009674) #27 RNF11 (ENSBTAG00000054545) #28 TTC39A (ENSBTAG00000002451) #29 ENSBTAG00000048722 EPS15 (ENSBTAG00000005542) #30 OSBPL9 (ENSBTAG00000021170) #32 NRDC (ENSBTAG00000021174) #33 RAB3B (ENSBTAG00000005337) #34 ENSBTAG00000049239 ENSBTAG00000052338 TXNDC12 (ENSBTAG00000011024) #36 BTF3L4 (ENSBTAG00000011025) #37 Siberian musk deer MODERN SPECIES 340 ENSMMSG00000014713 CYP4X1 (ENSMMSG00000014557) PDZK1IP1 (ENSMMSG00000014540) TAL1 (ENSMMSG00000014528) STIL (ENSMMSG00000014379) ENSMMSG00000014328 FOXE3 (ENSMMSG00000014313) FOXD2 (ENSMMSG00000014302) TRABD2B (ENSMMSG00000014286) #7 ENSMMSG00000014278 ENSMMSG00000014251 SLC5A9 (ENSMMSG00000014113) #9 SPATA6 (ENSMMSG00000014025) #11 BEND5 (ENSMMSG00000013981) #13 AGBL4 (ENSMMSG00000013891) #12 ELAVL4 (ENSMMSG00000012846) #22 DMRTA2 (ENSMMSG00000012786) #23 ENSMMSG00000012776 FAF1 (ENSMMSG00000012758) #24 CDKN2C (ENSMMSG00000012734) #25 ENSMMSG00000012725 C1orf185 (ENSMMSG00000012641) #27 RNF11 (ENSMMSG00000012629) #28 TTC39A (ENSMMSG00000012294) #29 EPS15 (ENSMMSG00000011662) #30 ENSMMSG00000011598 #31 OSBPL9 (ENSMMSG00000011045) #32 NRDC (ENSMMSG00000010652) #33 RAB3B (ENSMMSG00000010591) #34 TXNDC12 (ENSMMSG00000010552) #36 BTF3L4 (ENSMMSG00000010474) #37 Yarkand deer MODERN SPECIES 12 PDZK1IP1 (ENSCHYG00000023171) TAL1 (ENSCHYG00000023140) STIL (ENSCHYG00000023044) CMPK1 (ENSCHYG00000022970) FOXD2 (ENSCHYG00000022949) ENSCHYG00000022932 TRABD2B (ENSCHYG00000022894) #7 ENSCHYG00000022779 ENSCHYG00000022715 ENSCHYG00000022669 SLC5A9 (ENSCHYG00000022514) #9 SPATA6 (ENSCHYG00000022292) #11 BEND5 (ENSCHYG00000022182) #13 ENSCHYG00000022139 AGBL4 (ENSCHYG00000021988) #12 ELAVL4 (ENSCHYG00000021125) #22 ENSCHYG00000020992 FAF1 (ENSCHYG00000020360) #24 CDKN2C (ENSCHYG00000020293) #25 C1orf185 (ENSCHYG00000020169) #27 RNF11 (ENSCHYG00000020010) #28 TTC39A (ENSCHYG00000019043) #29 EPS15 (ENSCHYG00000018363) #30 ENSCHYG00000018015 #31 ENSCHYG00000016631 #32 ENSCHYG00000016488 NRDC (ENSCHYG00000012147) #33 RAB3B (ENSCHYG00000011948) #34 TXNDC12 (ENSCHYG00000011889) #36 BTF3L4 (ENSCHYG00000011776) #37 ZFYVE9 (ENSCHYG00000011418) Camelidae ANCESTRAL SPECIES 11 ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000160927 ENSGT00940000155173 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Arabian camel MODERN SPECIES 4 ATPAF1 (ENSCDRG00005019231) TEX38 (ENSCDRG00005019244) EFCAB14 (ENSCDRG00005019273) CYP4X1 (ENSCDRG00005019322) ENSCDRG00005019371 ENSCDRG00005019396 TAL1 (ENSCDRG00005019418) STIL (ENSCDRG00005019454) CMPK1 (ENSCDRG00005019485) TRABD2B (ENSCDRG00005003535) #7 SLC5A9 (ENSCDRG00005003621) #9 ENSCDRG00005003726 SPATA6 (ENSCDRG00005003747) #11 AGBL4 (ENSCDRG00005003837) #12 BEND5 (ENSCDRG00005003960) #13 ELAVL4 (ENSCDRG00005004051) #22 DMRTA2 (ENSCDRG00005004641) #23 FAF1 (ENSCDRG00005004702) #24 CDKN2C (ENSCDRG00005004767) #25 C1orf185 (ENSCDRG00005004794) #27 TTC39A (ENSCDRG00005004896) #29 EPS15 (ENSCDRG00005005246) #30 OSBPL9 (ENSCDRG00005005422) #32 NRDC (ENSCDRG00005005602) #33 RAB3B (ENSCDRG00005005964) #34 TXNDC12 (ENSCDRG00005005982) #36 BTF3L4 (ENSCDRG00005006016) #37 ZFYVE9 (ENSCDRG00005006088) CC2D1B (ENSCDRG00005006195) ORC1 (ENSCDRG00005006434) PRPF38A (ENSCDRG00005006492) Alpaca MODERN SPECIES 2449 AGBL4 (ENSVPAG00000011604) #12 BEND5 (ENSVPAG00000011605) #13 ELAVL4 (ENSVPAG00000011606) #22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Carnivora ANCESTRAL SPECIES 1 ENSGT00390000011196 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Caniformia ANCESTRAL SPECIES 2 ENSGT00390000011196 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Canidae ANCESTRAL SPECIES 12 ENSGT00940000155173.n ENSGT00940000155173.m.e.a.a ENSGT00940000155173.m.e.a.b ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831.db.a #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Canis_lupus ANCESTRAL SPECIES 16 ENSGT00940000155173.m.f ENSGT00940000155173.m.e.a.a ENSGT00940000155173.m.e.a.b ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831.db.a #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Dingo MODERN SPECIES 344 ENSCAFG00020014560 ENSCAFG00020014556 CYP4X1 (ENSCAFG00020014528) PDZK1IP1 (ENSCAFG00020014525) TAL1 (ENSCAFG00020014522) STIL (ENSCAFG00020014512) CMPK1 (ENSCAFG00020014509) FOXE3 (ENSCAFG00020014507) FOXD2 (ENSCAFG00020014506) TRABD2B (ENSCAFG00020014503) #7 SLC5A9 (ENSCAFG00020014477) #9 SPATA6 (ENSCAFG00020014474) #11 ENSCAFG00020014472 #12 ENSCAFG00020014471 #12 BEND5 (ENSCAFG00020014470) #13 ELAVL4 (ENSCAFG00020013581) #22 DMRTA2 (ENSCAFG00020013554) #23 ENSCAFG00020013547 ENSCAFG00020013544 ENSCAFG00020013515 #24 CDKN2C (ENSCAFG00020013503) #25 C1orf185 (ENSCAFG00020013497) #27 RNF11 (ENSCAFG00020013494) #28 TTC39A (ENSCAFG00020013487) #29 EPS15 (ENSCAFG00020013470) #30 OSBPL9 (ENSCAFG00020013459) #32 NRDC (ENSCAFG00020011213) #33 RAB3B (ENSCAFG00020011054) #34 TXNDC12 (ENSCAFG00020011048) #36 BTF3L4 (ENSCAFG00020011045) #37 ZFYVE9 (ENSCAFG00020011018) Dog MODERN SPECIES 6 CYP4B1 (ENSCAFG00845018109) CYP4A11 (ENSCAFG00845018002) CYP4A38 (ENSCAFG00845017288) ENSCAFG00845017005 CYP4X1 (ENSCAFG00845016805) PDZK1IP1 (ENSCAFG00845016726) TAL1 (ENSCAFG00845016668) STIL (ENSCAFG00845016474) CMPK1 (ENSCAFG00845016195) FOXE3 (ENSCAFG00845027178) FOXD2 (ENSCAFG00845027149) TRABD2B (ENSCAFG00845027015) #7 SLC5A9 (ENSCAFG00845026902) #9 SPATA6 (ENSCAFG00845026650) #11 AGBL4 (ENSCAFG00845025876) #13 ELAVL4 (ENSCAFG00845025265) #22 DMRTA2 (ENSCAFG00845025044) #23 ENSCAFG00845024999 FAF1 (ENSCAFG00845024609) #24 CDKN2C (ENSCAFG00845024510) #25 C1orf185 (ENSCAFG00845024301) #27 RNF11 (ENSCAFG00845024230) #28 TTC39A (ENSCAFG00845023616) #29 EPS15 (ENSCAFG00845022599) #30 OSBPL9 (ENSCAFG00845021857) #32 NRDC (ENSCAFG00845021372) #33 TXNDC12 (ENSCAFG00845021135) #34 BTF3L4 (ENSCAFG00845020858) #37 ZFYVE9 (ENSCAFG00845020399) CC2D1B (ENSCAFG00845020123) ORC1 (ENSCAFG00845019988) Red fox MODERN SPECIES 9 CYP4B1 (ENSVVUG00000007000) ENSVVUG00000006767 ENSVVUG00000006748 ENSVVUG00000006722 ENSVVUG00000006690 CYP4X1 (ENSVVUG00000006664) PDZK1IP1 (ENSVVUG00000006655) ENSVVUG00000006648 STIL (ENSVVUG00000006441) CMPK1 (ENSVVUG00000006426) TRABD2B (ENSVVUG00000006378) #7 SLC5A9 (ENSVVUG00000006359) #9 SPATA6 (ENSVVUG00000006346) #11 ENSVVUG00000006309 #12 BEND5 (ENSVVUG00000006293) #13 ELAVL4 (ENSVVUG00000006175) #22 ENSVVUG00000006092 ENSVVUG00000006087 ENSVVUG00000006081 FAF1 (ENSVVUG00000006069) #24 CDKN2C (ENSVVUG00000006026) #25 C1orf185 (ENSVVUG00000005980) #27 ENSVVUG00000005976 RNF11 (ENSVVUG00000005971) #28 TTC39A (ENSVVUG00000005650) #29 EPS15 (ENSVVUG00000004902) #30 OSBPL9 (ENSVVUG00000004835) #32 NRDC (ENSVVUG00000004788) #33 RAB3B (ENSVVUG00000004769) #34 KTI12 (ENSVVUG00000004765) TXNDC12 (ENSVVUG00000004760) #36 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00950000185079.c ENSGT00940000154290.a Ursidae ANCESTRAL SPECIES ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000161273 #7 ENSGT00940000157546.g #9 ENSGT00940000157546.h #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT01010000229967 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00950000185079.c Ursus ANCESTRAL SPECIES 19 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157546.h #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00950000185079.c ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Polar bear MODERN SPECIES 218 MOB3C (ENSUMAG00000023559) ATPAF1 (ENSUMAG00000023558) TEX38 (ENSUMAG00000023557) EFCAB14 (ENSUMAG00000023556) CYP4B1 (ENSUMAG00000023554) ENSUMAG00000023368 CYP4X1 (ENSUMAG00000023337) PDZK1IP1 (ENSUMAG00000023333) STIL (ENSUMAG00000023306) CMPK1 (ENSUMAG00000023298) ENSUMAG00000023291 #9 SPATA6 (ENSUMAG00000023285) #11 ENSUMAG00000023284 #12 ENSUMAG00000023282 #13 ENSUMAG00000023280 ELAVL4 (ENSUMAG00000023149) #22 ENSUMAG00000023107 ENSUMAG00000023105 FAF1 (ENSUMAG00000023099) #24 CDKN2C (ENSUMAG00000023096) #25 C1orf185 (ENSUMAG00000023093) #27 RNF11 (ENSUMAG00000023091) #28 TTC39A (ENSUMAG00000023064) #29 EPS15 (ENSUMAG00000022892) #30 OSBPL9 (ENSUMAG00000022814) #32 NRDC (ENSUMAG00000022809) #33 RAB3B (ENSUMAG00000022807) #34 ENSUMAG00000022804 #35 TXNDC12 (ENSUMAG00000022801) #36 BTF3L4 (ENSUMAG00000022798) #37 ENSUMAG00000022797 American black bear MODERN SPECIES 3634 ELAVL4 (ENSUAMG00000013026) #22 Giant Panda MODERN SPECIES 11 ENSAMEG00000025041 TEX38 (ENSAMEG00000020215) EFCAB14 (ENSAMEG00000014050) CYP4B1 (ENSAMEG00000014075) ENSAMEG00000029837 CYP4X1 (ENSAMEG00000000016) PDZK1IP1 (ENSAMEG00000024007) TAL1 (ENSAMEG00000029725) STIL (ENSAMEG00000000013) CMPK1 (ENSAMEG00000000012) TRABD2B (ENSAMEG00000018869) #7 SLC5A9 (ENSAMEG00000008581) #9 SPATA6 (ENSAMEG00000008559) #11 AGBL4 (ENSAMEG00000009391) #12 BEND5 (ENSAMEG00000009379) #13 ELAVL4 (ENSAMEG00000017455) #22 ENSAMEG00000029933 DMRTA2 (ENSAMEG00000026233) #23 FAF1 (ENSAMEG00000017472) #24 ENSAMEG00000031167 CDKN2C (ENSAMEG00000028782) #25 C1orf185 (ENSAMEG00000024320) #27 RNF11 (ENSAMEG00000017484) #28 TTC39A (ENSAMEG00000017488) #29 EPS15 (ENSAMEG00000017515) #30 OSBPL9 (ENSAMEG00000008968) #32 NRDC (ENSAMEG00000009034) #33 ENSAMEG00000027180 RAB3B (ENSAMEG00000009140) #34 TXNDC12 (ENSAMEG00000009146) #36 ENSAMEG00000030584 #35 Mustelinae ANCESTRAL SPECIES 39 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00900000142372 #35 ENSGT00940000154296 #37 ENSGT00950000185079.c ENSGT00940000154290.a American mink MODERN SPECIES 361 ELAVL4 (ENSNVIG00000018303) #22 DMRTA2 (ENSNVIG00000018412) #23 FAF1 (ENSNVIG00000018426) #24 CDN2C (ENSNVIG00000018452) #25 ENSNVIG00000018460 C1orf185 (ENSNVIG00000018467) #27 RNF11 (ENSNVIG00000018471) #28 E7EQY9 (ENSNVIG00000018488) #29 EPS15 (ENSNVIG00000018625) #30 Ferret MODERN SPECIES 361 ELAVL4 (ENSMPUG00000007192) #22 DMRTA2 (ENSMPUG00000007160) #23 FAF1 (ENSMPUG00000007136) #24 CDKN2C (ENSMPUG00000007132) #25 RNF11 (ENSMPUG00000007108) #28 TTC39A (ENSMPUG00000007092) #29 EPS15 (ENSMPUG00000007072) #30 ENSMPUG00000007061 OSBPL9 (ENSMPUG00000007053) #32 NRDC (ENSMPUG00000007032) #33 RAB3B (ENSMPUG00000007029) #34 TXNDC12 (ENSMPUG00000007020) #36 BTF3L4 (ENSMPUG00000006966) #37 ZFYVE9 (ENSMPUG00000006950) CC2D1B (ENSMPUG00000006927) ORC1 (ENSMPUG00000006904) Felidae ANCESTRAL SPECIES 10 ENSGT00940000155173.m.b ENSGT00940000155173.m.a.a ENSGT00940000155173.m.a.b ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Panthera ANCESTRAL SPECIES 4 ENSGT00940000155173.m.a.a ENSGT00940000155173.m.a.b ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00950000182922.a.a.a.b.a.b.a.a.c.a.a ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Tiger MODERN SPECIES 100 ENSPTIG00000020880 CYP4A106 (ENSPTIG00000020491) CYP4A37 (ENSPTIG00000018827) CYP4X1 (ENSPTIG00000018303) PDZK1IP1 (ENSPTIG00000018010) TAL1 (ENSPTIG00000017616) STIL (ENSPTIG00000011691) CMPK1 (ENSPTIG00000011122) TRABD2B (ENSPTIG00000009870) #7 SLC5A9 (ENSPTIG00000007011) #9 SPATA6 (ENSPTIG00000021470) #11 AGBL4 (ENSPTIG00000021182) #12 BEND5 (ENSPTIG00000020902) #13 ENSPTIG00000005063 ENSPTIG00000019852 #12 ELAVL4 (ENSPTIG00000016727) #22 FAF1 (ENSPTIG00000014264) #24 CDKN2C (ENSPTIG00000013155) #25 C1orf185 (ENSPTIG00000012429) #27 RNF11 (ENSPTIG00000012147) #28 TTC39A (ENSPTIG00000006822) #29 EPS15 (ENSPTIG00000021361) #30 OSBPL9 (ENSPTIG00000014514) #32 ENSPTIG00000014000 NRDC (ENSPTIG00000011593) #33 RAB3B (ENSPTIG00000010883) #34 TXNDC12 (ENSPTIG00000009168) #36 ENSPTIG00000006624 #37 ZFYVE9 (ENSPTIG00000020130) CC2D1B (ENSPTIG00000018871) ORC1 (ENSPTIG00000015613) Panthera_a ANCESTRAL SPECIES 11 ENSGT00940000155173.m.a.a ENSGT00940000155173.m.a.b ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00950000182922.a.a.a.b.a.b.a.a.c.a.a ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B leopard MODERN SPECIES 16 CYP4A37 (ENSPPRG00000007723) CYP4X1 (ENSPPRG00000008167) PDZK1IP1 (ENSPPRG00000008341) TAL1 (ENSPPRG00000008561) STIL (ENSPPRG00000010998) ENSPPRG00000012334 FOXE3 (ENSPPRG00000012774) FOXD2 (ENSPPRG00000017402) TRABD2B (ENSPPRG00000013314) #7 SLC5A9 (ENSPPRG00000020008) #9 SPATA6 (ENSPPRG00000023213) #11 AGBL4 (ENSPPRG00000022863) #12 BEND5 (ENSPPRG00000022625) #13 ENSPPRG00000017680 ENSPPRG00000001721 #12 ELAVL4 (ENSPPRG00000002764) #22 DMRTA2 (ENSPPRG00000003651) #23 FAF1 (ENSPPRG00000005301) #24 CDKN2C (ENSPPRG00000005623) #25 C1orf185 (ENSPPRG00000006868) #27 RNF11 (ENSPPRG00000007187) #28 TTC39A (ENSPPRG00000010046) #29 ENSPPRG00000011797 EPS15 (ENSPPRG00000014230) #30 OSBPL9 (ENSPPRG00000002600) #32 ENSPPRG00000003302 NRDC (ENSPPRG00000005332) #33 RAB3B (ENSPPRG00000006055) #34 TXNDC12 (ENSPPRG00000006551) #36 ENSPPRG00000007572 #37 ZFYVE9 (ENSPPRG00000009797) lion MODERN SPECIES 8 ENSPLOG00000007060 ENSPLOG00000006991 ENSPLOG00000006700 CYP4X1 (ENSPLOG00000006599) PDZK1IP1 (ENSPLOG00000006576) TAL1 (ENSPLOG00000006549) STIL (ENSPLOG00000006499) CMPK1 (ENSPLOG00000006430) FOXE3 (ENSPLOG00000006409) FOXD2 (ENSPLOG00000006398) TRABD2B (ENSPLOG00000006352) #7 SLC5A9 (ENSPLOG00000006218) #9 SPATA6 (ENSPLOG00000006148) #11 BEND5 (ENSPLOG00000006114) #13 AGBL4 (ENSPLOG00000006006) #12 ELAVL4 (ENSPLOG00000005634) #22 ENSPLOG00000005447 DMRTA2 (ENSPLOG00000005423) #23 ENSPLOG00000005409 FAF1 (ENSPLOG00000005328) #24 CDKN2C (ENSPLOG00000005297) #25 C1orf185 (ENSPLOG00000005287) #27 RNF11 (ENSPLOG00000005279) #28 TTC39A (ENSPLOG00000005228) #29 ENSPLOG00000005215 EPS15 (ENSPLOG00000005145) #30 ENSPLOG00000004872 #32 ENSPLOG00000004732 NRDC (ENSPLOG00000019705) #33 RAB3B (ENSPLOG00000019621) #34 ENSPLOG00000019597 #35 Cat MODERN SPECIES 239 ENSFCAG00000038068 ENSFCAG00000037991 CYP4A37 (ENSFCAG00000040744) CYP4X1 (ENSFCAG00000007168) PDZK1IP1 (ENSFCAG00000019308) TAL1 (ENSFCAG00000045414) STIL (ENSFCAG00000012141) CMPK1 (ENSFCAG00000025426) FOXE3 (ENSFCAG00000046511) FOXD2 (ENSFCAG00000044804) TRABD2B (ENSFCAG00000000546) #7 SLC5A9 (ENSFCAG00000000548) #9 SPATA6 (ENSFCAG00000029729) #11 AGBL4 (ENSFCAG00000000550) #12 ENSFCAG00000022016 ELAVL4 (ENSFCAG00000010438) #22 DMRTA2 (ENSFCAG00000045950) #23 FAF1 (ENSFCAG00000011327) #24 ENSFCAG00000028644 CDKN2C (ENSFCAG00000033306) #25 CC1H1orf185 (ENSFCAG00000043741) #27 RNF11 (ENSFCAG00000035271) #28 TTC39A (ENSFCAG00000014565) #29 EPS15 (ENSFCAG00000027650) #30 OSBPL9 (ENSFCAG00000010298) #32 NRDC (ENSFCAG00000022018) #33 ENSFCAG00000031410 TXNDC12 (ENSFCAG00000023885) #34 BTF3L4 (ENSFCAG00000024164) #37 ZFYVE9 (ENSFCAG00000024078) CC2D1B (ENSFCAG00000002516) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Equus ANCESTRAL SPECIES 2 ENSGT00940000155173.q.a.a ENSGT00940000161441.c.b.a ENSGT00940000155173.q.a.b ENSGT00940000155173.q.b ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00900000142372 #35 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 Donkey MODERN SPECIES 25 ENSEASG00005010169 ENSEASG00005014485 ENSEASG00005010633 ENSEASG00005010640 ENSEASG00005010647 ENSEASG00005034479 ENSEASG00005023820 ENSEASG00005038126 STIL (ENSEASG00005010657) CMPK1 (ENSEASG00005010695) TRABD2B (ENSEASG00005010700) #7 SLC5A9 (ENSEASG00005010710) #9 SPATA6 (ENSEASG00005010718) #11 AGBL4 (ENSEASG00005010721) #12 BEND5 (ENSEASG00005010723) #13 ELAVL4 (ENSEASG00005010728) #22 DMRTA2 (ENSEASG00005037248) #23 FAF1 (ENSEASG00005010732) #24 CDKN2C (ENSEASG00005010733) #25 C1orf185 (ENSEASG00005037128) #27 RNF11 (ENSEASG00005037659) #28 TTC39A (ENSEASG00005010736) #29 EPS15 (ENSEASG00005010751) #30 ENSEASG00005010925 #31 ENSEASG00005030901 #32 OSBPL9 (ENSEASG00005010962) #32 NRDC (ENSEASG00005011045) #33 RAB3B (ENSEASG00005027002) #34 TXNDC12 (ENSEASG00005029657) #36 KTI12 (ENSEASG00005028147) ENSEASG00005014402 #35 Horse MODERN SPECIES 11 ENSECAG00000046409 ENSECAG00000045102 ENSECAG00000027949 ENSECAG00000033081 CYP4X1 (ENSECAG00000020100) TAL1 (ENSECAG00000018746) STIL (ENSECAG00000011152) CMPK1 (ENSECAG00000000428) FOXE3 (ENSECAG00000049916) TRABD2B (ENSECAG00000022697) #7 SLC5A9 (ENSECAG00000011684) #9 SPATA6 (ENSECAG00000000158) #11 ENSECAG00000055301 #12 BEND5 (ENSECAG00000051417) #13 ENSECAG00000059132 #12 ELAVL4 (ENSECAG00000022284) #22 DMRTA2 (ENSECAG00000029061) #23 ENSECAG00000044105 FAF1 (ENSECAG00000008495) #24 CDKN2C (ENSECAG00000004817) #25 C2H1orf185 (ENSECAG00000025041) #27 ENSECAG00000055972 RNF11 (ENSECAG00000036831) #28 TTC39A (ENSECAG00000015196) #29 EPS15 (ENSECAG00000020824) #30 CALR4 (ENSECAG00000015205) #31 ENSECAG00000017935 #32 NRDC (ENSECAG00000021612) #33 RAB3B (ENSECAG00000015669) #34 ENSECAG00000032332 #35 KTI12 (ENSECAG00000060027) Chiroptera ANCESTRAL SPECIES ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000162562.B ENSGT00940000162562.A ENSGT00940000164707 ENSGT00940000157546 #9 ENSGT00990000204587 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Greater horseshoe bat MODERN SPECIES 27 STIL (ENSRFEG00010001982) ENSRFEG00010002024 CMPK1 (ENSRFEG00010002044) FOXE3 (ENSRFEG00010002079) FOXD2 (ENSRFEG00010002087) TRABD2B (ENSRFEG00010002104) #7 ENSRFEG00010002138 ENSRFEG00010002154 ENSRFEG00010002180 ENSRFEG00010002204 SLC5A9 (ENSRFEG00010002222) #9 ENSRFEG00010002251 SPATA6 (ENSRFEG00010002287) #11 AGBL4 (ENSRFEG00010002410) #12 BEND5 (ENSRFEG00010002514) #13 ELAVL4 (ENSRFEG00010002640) #22 DMRTA2 (ENSRFEG00010002791) #23 FAF1 (ENSRFEG00010002825) #24 CDKN2C (ENSRFEG00010002917) #25 ENSRFEG00010002937 RNF11 (ENSRFEG00010002953) #28 TTC39A (ENSRFEG00010003039) #29 EPS15 (ENSRFEG00010003189) #30 ENSRFEG00010003316 #31 OSBPL9 (ENSRFEG00010003405) #32 NRDC (ENSRFEG00010003552) #33 RAB3B (ENSRFEG00010003630) #34 TXNDC12 (ENSRFEG00010003659) #36 ENSRFEG00010003696 #37 ZFYVE9 (ENSRFEG00010003740) CC2D1B (ENSRFEG00010003800) Microbat MODERN SPECIES 974 CYP4B1 (ENSMLUG00000002776) ENSMLUG00000024150 ENSMLUG00000025621 ENSMLUG00000002780 CYP4X1 (ENSMLUG00000011781) PDZK1IP1 (ENSMLUG00000006083) TAL1 (ENSMLUG00000006388) STIL (ENSMLUG00000006395) TRABD2B (ENSMLUG00000010918) #7 ENSMLUG00000022445 ENSMLUG00000024145 SLC5A9 (ENSMLUG00000010198) #9 SPATA6 (ENSMLUG00000011417) #11 ENSMLUG00000016567 #12 BEND5 (ENSMLUG00000016578) #13 ELAVL4 (ENSMLUG00000006226) #22 DMRTA2 (ENSMLUG00000006249) #23 FAF1 (ENSMLUG00000006252) #24 CDKN2C (ENSMLUG00000006627) #25 C1orf185 (ENSMLUG00000023716) #27 ENSMLUG00000004439 #28 TTC39A (ENSMLUG00000004443) #29 EPS15 (ENSMLUG00000004454) #30 OSBPL9 (ENSMLUG00000009199) #32 NRDC (ENSMLUG00000009233) #33 RAB3B (ENSMLUG00000016868) #34 TXNDC12 (ENSMLUG00000016872) #36 ENSMLUG00000016884 #37 ZFYVE9 (ENSMLUG00000001012) CC2D1B (ENSMLUG00000001023) ORC1 (ENSMLUG00000001040) Megabat MODERN SPECIES 141 SLC5A9 (ENSPVAG00000003625) #9 SPATA6 (ENSPVAG00000003628) #11 AGBL4 (ENSPVAG00000003630) #12 ELAVL4 (ENSPVAG00000003632) #22 Atlantogenata ANCESTRAL SPECIES 11 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000155173 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 Xenarthra ANCESTRAL SPECIES 119 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Armadillo MODERN SPECIES 3550 ENSDNOG00000042500 ETV1 (ENSDNOG00000010823) ENSDNOG00000041530 ELAVL4 (ENSDNOG00000033502) #22 DMRTA2 (ENSDNOG00000041150) #23 FAF1 (ENSDNOG00000032394) #24 CDKN2C (ENSDNOG00000040641) #25 C1orf185 (ENSDNOG00000035981) #27 ENSDNOG00000013675 TTC39A (ENSDNOG00000042530) #29 EPS15 (ENSDNOG00000034252) #30 ENSDNOG00000046109 OSBPL9 (ENSDNOG00000013879) #32 NRDC (ENSDNOG00000013916) #33 RAB3B (ENSDNOG00000003158) #34 TXNDC12 (ENSDNOG00000040593) #36 ENSDNOG00000003181 #37 ZFYVE9 (ENSDNOG00000008484) CC2D1B (ENSDNOG00000017180) Sloth MODERN SPECIES 4829 ELAVL4 (ENSCHOG00000002464) #22 Afrotheria ANCESTRAL SPECIES 21 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000155173 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 Tenrec MODERN SPECIES 5254 ELAVL4 (ENSETEG00000013779) #22 Afrotheria_a ANCESTRAL SPECIES 20 ENSGT00390000016446 ENSGT00390000011196 ENSGT00940000161441 ENSGT00940000155173 ENSGT00940000160927 ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00390000000797 #27 ENSGT00940000163721 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 Elephant MODERN SPECIES 145 EFCAB14 (ENSLAFG00000011146) CYP4B1 (ENSLAFG00000011142) ENSLAFG00000011889 ENSLAFG00000027061 ENSLAFG00000002985 PDZK1IP1 (ENSLAFG00000029973) TAL1 (ENSLAFG00000013880) STIL (ENSLAFG00000006255) ENSLAFG00000006582 FOXD2 (ENSLAFG00000026547) ENSLAFG00000032111 #7 SLC5A9 (ENSLAFG00000016268) #9 SPATA6 (ENSLAFG00000016279) #11 ENSLAFG00000012535 #12 BEND5 (ENSLAFG00000003490) #13 ELAVL4 (ENSLAFG00000001087) #22 DMRTA2 (ENSLAFG00000021953) #23 FAF1 (ENSLAFG00000012030) #24 ENSLAFG00000032567 CDKN2C (ENSLAFG00000009338) #25 C1orf185 (ENSLAFG00000030448) #27 ENSLAFG00000026503 TTC39A (ENSLAFG00000021966) #29 EPS15 (ENSLAFG00000012528) #30 ENSLAFG00000016931 #31 OSBPL9 (ENSLAFG00000001251) #32 NRDC (ENSLAFG00000001255) #33 RAB3B (ENSLAFG00000016112) #34 TXNDC12 (ENSLAFG00000016116) #36 BTF3L4 (ENSLAFG00000016124) #37 ZFYVE9 (ENSLAFG00000008625) Hyrax MODERN SPECIES 9201 ELAVL4 (ENSPCAG00000008215) #22 Marsupialia DUPLICATION Marsupialia ANCESTRAL SPECIES 36 ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b ENSGT01050000245003 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00940000155097.a ENSGT00390000008820.e.a ENSGT00950000183593 ENSGT00940000159568 ENSGT00390000012178 ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000158214.e ENSGT01020000230412.D ENSGT00940000157399.m #22 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000182962.a.b Opossum MODERN SPECIES 627 ENSMODG00000045736 CYSLTR1 (ENSMODG00000004207) ENSMODG00000004142 ENSMODG00000004077 ENSMODG00000004055 ENSMODG00000028942 ATP7A (ENSMODG00000004010) ENSMODG00000003953 MAGT1 (ENSMODG00000003944) ATRX (ENSMODG00000003920) FGF16 (ENSMODG00000003900) ENSMODG00000003877 ENSMODG00000043274 ZDHHC15 (ENSMODG00000003871) UPRT (ENSMODG00000027579) ENSMODG00000037297 #22 ENSMODG00000010130 ENSMODG00000014379 ENSMODG00000014370 ENSMODG00000049990 ENSMODG00000049021 ENSMODG00000014364 POF1B (ENSMODG00000014360) ZNF711 (ENSMODG00000014346) ENSMODG00000047591 ENSMODG00000014335 ENSMODG00000027748 ENSMODG00000014330 ENSMODG00000047117 ENSMODG00000014317 HDX (ENSMODG00000014307) Marsupialia_b ANCESTRAL SPECIES 32 ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b ENSGT01050000245003 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00940000155097.a ENSGT00390000008820.e.a ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178 ENSGT00390000012030.b.a ENSGT00940000155902.i ENSGT00940000160087 ENSGT00940000158214.e ENSGT01020000230412.D ENSGT00940000157399.m #22 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000182962.a.b ENSGT00940000160347.f.a.b Diprotodontia ANCESTRAL SPECIES 72 ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b ENSGT01050000245003 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00940000155097.a ENSGT00390000008820.e.a ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178 ENSGT00390000012030.b.a ENSGT00940000155902.i ENSGT00940000160087 ENSGT00940000158214.e ENSGT01020000230412.D ENSGT00940000157399.m #22 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000182962.a.b ENSGT00940000160347.f.a.b Diprotodontia_a ANCESTRAL SPECIES 69 ENSGT01100000263536.A.a.a.b ENSGT01040000240444.A.a.a.a.b ENSGT01050000245003 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00940000155097.a ENSGT00390000008820.e.a.g ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178 ENSGT00390000012030.b.a ENSGT00940000155902.i ENSGT00940000160087 ENSGT00940000158214.e ENSGT01020000230412.D ENSGT00940000157399.m #22 ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000159450 ENSGT00950000182962.a.b ENSGT00940000160347.f.a.b Common wonbat MODERN SPECIES 256 P2RY10 (ENSVURG00010010733) LPAR4 (ENSVURG00010010729) ENSVURG00010010723 CYSLTR1 (ENSVURG00010010720) ENSVURG00010006043 ENSVURG00010005813 ENSVURG00010005765 ATP7A (ENSVURG00010005745) ENSVURG00010005732 MAGT1 (ENSVURG00010005717) ENSVURG00010005709 ATRX (ENSVURG00010005552) FGF16 (ENSVURG00010005505) ZDHHC15 (ENSVURG00010005482) UPRT (ENSVURG00010005471) ENSVURG00010005447 #22 ABCB7 (ENSVURG00010005380) NEXMIF (ENSVURG00010005349) RLIM (ENSVURG00010005341) SLC16A2 (ENSVURG00010005326) ENSVURG00010005317 koala MODERN SPECIES 153 P2RY10 (ENSPCIG00000007695) LPAR4 (ENSPCIG00000036415) ENSPCIG00000007698 CYSLTR1 (ENSPCIG00000028506) ENSPCIG00000026996 ENSPCIG00000026916 ENSPCIG00000026908 ENSPCIG00000026914 ATP7A (ENSPCIG00000026898) ENSPCIG00000026893 MAGT1 (ENSPCIG00000026890) ATRX (ENSPCIG00000017088) FGF16 (ENSPCIG00000017103) ZDHHC15 (ENSPCIG00000017111) UPRT (ENSPCIG00000017115) ENSPCIG00000017116 #22 ABCB7 (ENSPCIG00000017133) NEXMIF (ENSPCIG00000017144) RLIM (ENSPCIG00000017146) SLC16A2 (ENSPCIG00000017147) ENSPCIG00000033337 Tasmanian devil MODERN SPECIES 21 P2RY10 (ENSSHAG00000028613) ENSSHAG00000026487 ENSSHAG00000014281 CYSLTR1 (ENSSHAG00000013758) ENSSHAG00000013267 ENSSHAG00000023354 ENSSHAG00000001853 ENSSHAG00000022184 ENSSHAG00000012787 ENSSHAG00000020548 MAGT1 (ENSSHAG00000012304) ENSSHAG00000011030 ENSSHAG00000021047 ENSSHAG00000023346 UPRT (ENSSHAG00000029910) ENSSHAG00000001657 #22 ABCB7 (ENSSHAG00000003945) NEXMIF (ENSSHAG00000031074) ENSSHAG00000009097 ENSSHAG00000026777 ENSSHAG00000010807 ENSSHAG00000025140 ENSSHAG00000021271 ENSSHAG00000021973 ENSSHAG00000004084 ENSSHAG00000025700 ENSSHAG00000021754 ENSSHAG00000001212 ENSSHAG00000015562 ENSSHAG00000015847 ENSSHAG00000028813 Marsupialia ANCESTRAL SPECIES 3 ENSGT00390000011196 ENSGT00940000155173.w.b ENSGT00940000161441.a ENSGT00940000155173.x.b ENSGT00940000155173.x.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546.j #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399.n #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Opossum MODERN SPECIES 1 EFCAB14 (ENSMODG00000001906) ENSMODG00000001890 ENSMODG00000045742 ENSMODG00000001709 ENSMODG00000025699 ENSMODG00000001521 ENSMODG00000001509 TAL1 (ENSMODG00000001502) STIL (ENSMODG00000001494) CMPK1 (ENSMODG00000001470) ENSMODG00000001419 TRABD2B (ENSMODG00000025378) #7 ENSMODG00000001399 #9 SPATA6 (ENSMODG00000001370) #11 ENSMODG00000043124 ELAVL4 (ENSMODG00000001300) #22 ENSMODG00000037117 ENSMODG00000028629 DMRTA2 (ENSMODG00000001251) #23 FAF1 (ENSMODG00000001243) #24 CDKN2C (ENSMODG00000050495) #25 RNF11 (ENSMODG00000001185) #28 TTC39A (ENSMODG00000001179) #29 ENSMODG00000001043 #30 ENSMODG00000043919 #30 ENSMODG00000000946 #31 OSBPL9 (ENSMODG00000000934) #32 NRDC (ENSMODG00000000839) #33 RAB3B (ENSMODG00000040379) #34 KTI12 (ENSMODG00000000774) TXNDC12 (ENSMODG00000025408) #36 Marsupialia_b ANCESTRAL SPECIES 6 ENSGT00940000155173.w.b ENSGT00940000155173.w.a ENSGT00940000161441.a ENSGT00940000155173.x.b ENSGT00940000155173.x.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546.j #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399.n #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00390000002443 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Tasmanian devil MODERN SPECIES 3 ENSSHAG00000024463 ENSSHAG00000031091 ENSSHAG00000002195 ENSSHAG00000003731 ENSSHAG00000030071 ENSSHAG00000011157 ENSSHAG00000025781 TAL1 (ENSSHAG00000023407) STIL (ENSSHAG00000010095) CMPK1 (ENSSHAG00000009766) FOXD2 (ENSSHAG00000020552) ENSSHAG00000011466 #7 SPATA6 (ENSSHAG00000009732) #11 ENSSHAG00000008897 #12 ENSSHAG00000028157 #13 ELAVL4 (ENSSHAG00000030056) #22 FAF1 (ENSSHAG00000011175) #24 CDKN2C (ENSSHAG00000028975) #25 ENSSHAG00000032332 ENSSHAG00000029224 TTC39A (ENSSHAG00000008699) #29 EPS15 (ENSSHAG00000007854) #30 ENSSHAG00000006819 #31 OSBPL9 (ENSSHAG00000004308) #32 NRDC (ENSSHAG00000002791) #33 RAB3B (ENSSHAG00000028384) #34 KTI12 (ENSSHAG00000032395) TXNDC12 (ENSSHAG00000022310) #36 BTF3L4 (ENSSHAG00000025846) #37 ZFYVE9 (ENSSHAG00000007305) CC2D1B (ENSSHAG00000007051) Diprotodontia ANCESTRAL SPECIES 80 ENSGT00940000161273 #7 ENSGT00940000157546.j #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399.n #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Diprotodontia_a ANCESTRAL SPECIES 3 ENSGT00940000155173.w.a ENSGT00940000161441.b.a.a ENSGT00940000161441.a ENSGT00940000155173.x.b ENSGT00940000155173.x.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546.j #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b #12 ENSGT00390000001724 #13 ENSGT00940000157399.n #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Common wonbat MODERN SPECIES 1060 ENSVURG00010017567 ENSVURG00010017579 ENSVURG00010017586 PDZK1IP1 (ENSVURG00010017600) TAL1 (ENSVURG00010017608) STIL (ENSVURG00010017620) CMPK1 (ENSVURG00010017630) ENSVURG00010017639 FOXD2 (ENSVURG00010017640) TRABD2B (ENSVURG00010017643) #7 SLC5A9 (ENSVURG00010017646) #9 SPATA6 (ENSVURG00010017656) #11 ENSVURG00010017676 #12 BEND5 (ENSVURG00010017683) #13 ENSVURG00010017690 ELAVL4 (ENSVURG00010017721) #22 DMRTA2 (ENSVURG00010018172) #23 FAF1 (ENSVURG00010018181) #24 CDKN2C (ENSVURG00010018190) #25 RNF11 (ENSVURG00010018204) #28 TTC39A (ENSVURG00010018213) #29 EPS15 (ENSVURG00010018256) #30 ENSVURG00010018275 #31 OSBPL9 (ENSVURG00010018296) #32 NRDC (ENSVURG00010018372) #33 TXNDC12 (ENSVURG00010018423) #36 KTI12 (ENSVURG00010018437) BTF3L4 (ENSVURG00010018442) #37 ZFYVE9 (ENSVURG00010018455) CC2D1B (ENSVURG00010018471) ORC1 (ENSVURG00010018481) koala MODERN SPECIES 29 ENSPCIG00000026492 ENSPCIG00000026491 ENSPCIG00000006228 PDZK1IP1 (ENSPCIG00000006233) TAL1 (ENSPCIG00000033850) STIL (ENSPCIG00000006238) ENSPCIG00000016606 ENSPCIG00000016604 FOXD2 (ENSPCIG00000024785) TRABD2B (ENSPCIG00000036779) #7 SLC5A9 (ENSPCIG00000019164) #9 SPATA6 (ENSPCIG00000004132) #11 ENSPCIG00000012506 #12 BEND5 (ENSPCIG00000004124) #13 ENSPCIG00000033716 #12 ELAVL4 (ENSPCIG00000032142) #22 DMRTA2 (ENSPCIG00000030921) #23 FAF1 (ENSPCIG00000001340) #24 CDKN2C (ENSPCIG00000001502) #25 RNF11 (ENSPCIG00000017406) #28 TTC39A (ENSPCIG00000006797) #29 EPS15 (ENSPCIG00000030216) #30 ENSPCIG00000030211 #31 OSBPL9 (ENSPCIG00000024185) #32 NRDC (ENSPCIG00000024193) #33 RAB3B (ENSPCIG00000024200) #34 TXNDC12 (ENSPCIG00000024201) #36 KTI12 (ENSPCIG00000031326) ENSPCIG00000024202 #37 ZFYVE9 (ENSPCIG00000024205) CC2D1B (ENSPCIG00000024235) Wallaby MODERN SPECIES 6598 ELAVL4 (ENSMEUG00000007145) #22 Platypus MODERN SPECIES 9 LURAP1 (ENSOANG00000044785) POMGNT1 (ENSOANG00000039832) ENSOANG00000014732 ENSOANG00000002637 ENSOANG00000002639 PDZK1IP1 (ENSOANG00000042171) TAL1 (ENSOANG00000032005) ENSOANG00000002942 ENSOANG00000015215 ENSOANG00000043767 ENSOANG00000030729 TRABD2B (ENSOANG00000037757) #7 SLC5A9 (ENSOANG00000004257) #9 ENSOANG00000041444 #11 BEND5 (ENSOANG00000009132) #13 ELAVL4 (ENSOANG00000036778) #22 DMRTA2 (ENSOANG00000040884) #23 FAF1 (ENSOANG00000006035) #24 CDKN2C (ENSOANG00000040623) #25 ENSOANG00000045226 #27 ENSOANG00000050041 RNF11 (ENSOANG00000013493) #28 TTC39A (ENSOANG00000013494) #29 ENSOANG00000014893 #31 ENSOANG00000048539 #30 ENSOANG00000012572 OSBPL9 (ENSOANG00000040748) #32 NRDC (ENSOANG00000050474) #33 TXNDC12 (ENSOANG00000047968) #36 ENSOANG00000040000 #37 ZFYVE9 (ENSOANG00000050250) Sauria ANCESTRAL SPECIES 7 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a Lepidosauria ANCESTRAL SPECIES 11 ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Episquamata ANCESTRAL SPECIES 1 ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Laterata ANCESTRAL SPECIES 3 ENSGT00940000161527.d.b.a.c ENSGT00940000161527.d.a.c ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Argentine black and white tegu MODERN SPECIES 16 ENSSMRG00000018331 ENSSMRG00000018315 ENSSMRG00000018313 PDZK1IP1 (ENSSMRG00000018312) TAL1 (ENSSMRG00000018311) STIL (ENSSMRG00000018309) ENSSMRG00000018308 ENSSMRG00000018307 ENSSMRG00000018306 SLC5A9 (ENSSMRG00000018304) #9 ENSSMRG00000018303 SPATA6 (ENSSMRG00000018302) #11 ENSSMRG00000018301 #12 BEND5 (ENSSMRG00000018300) #13 ENSSMRG00000018299 #12 ELAVL4 (ENSSMRG00000018298) #22 ENSSMRG00000018296 DMRTA2 (ENSSMRG00000018294) #23 FAF1 (ENSSMRG00000018293) #24 CDKN2C (ENSSMRG00000018292) #25 TTC39A (ENSSMRG00000018291) #29 RNF11 (ENSSMRG00000018290) #28 EPS15 (ENSSMRG00000018289) #30 ENSSMRG00000018288 #31 OSBPL9 (ENSSMRG00000018287) #32 ENSSMRG00000018286 #33 RAB3B (ENSSMRG00000018285) #34 TXNDC12 (ENSSMRG00000018284) #36 ENSSMRG00000018283 #37 ZFYVE9 (ENSSMRG00000018282) CC2D1B (ENSSMRG00000018269) Common wall lizard MODERN SPECIES 14 PDZK1IP1 (ENSPMRG00000007777) TAL1 (ENSPMRG00000007774) STIL (ENSPMRG00000007767) ENSPMRG00000007758 ENSPMRG00000007733 FOXD2 (ENSPMRG00000007722) TRABD2B (ENSPMRG00000007718) #7 SLC5A9 (ENSPMRG00000007711) #9 ENSPMRG00000007706 SPATA6 (ENSPMRG00000006072) #11 ENSPMRG00000006060 #12 BEND5 (ENSPMRG00000006049) #13 ENSPMRG00000006044 ENSPMRG00000006039 ENSPMRG00000006025 #12 ELAVL4 (ENSPMRG00000005996) #22 ENSPMRG00000005978 DMRTA2 (ENSPMRG00000005970) #23 FAF1 (ENSPMRG00000005947) #24 CDKN2C (ENSPMRG00000005936) #25 RNF11 (ENSPMRG00000005930) #28 TTC39A (ENSPMRG00000005792) #29 EPS15 (ENSPMRG00000005708) #30 ENSPMRG00000005528 #31 OSBPL9 (ENSPMRG00000005493) #32 ENSPMRG00000005468 #33 RAB3B (ENSPMRG00000005462) #34 TXNDC12 (ENSPMRG00000005450) #36 BTF3L4 (ENSPMRG00000005442) #37 ZFYVE9 (ENSPMRG00000005429) CC2D1B (ENSPMRG00000005406) Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000161527.d.b.a.d ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000163630.Q.e.a ENSGT01030000234712.a ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a Elapidae ANCESTRAL SPECIES 1 ENSGT00390000011196 ENSGT00940000161527.c.b ENSGT00940000161527.d.a ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724.d #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Indian cobra MODERN SPECIES 2 ENSNNAG00000009790 EFCAB14 (ENSNNAG00000009832) ENSNNAG00000009903 ENSNNAG00000009996 TAL1 (ENSNNAG00000010424) STIL (ENSNNAG00000010456) CMPK1 (ENSNNAG00000010501) ENSNNAG00000010525 FOXD2 (ENSNNAG00000010546) TRABD2B (ENSNNAG00000010576) #7 SLC5A9 (ENSNNAG00000010629) #9 SPATA6 (ENSNNAG00000010665) #11 ENSNNAG00000010704 #12 BEND5 (ENSNNAG00000010746) #13 ENSNNAG00000010783 #12 ELAVL4 (ENSNNAG00000010818) #22 DMRTA2 (ENSNNAG00000010977) #23 FAF1 (ENSNNAG00000010998) #24 ENSNNAG00000011066 ENSNNAG00000011091 CDKN2C (ENSNNAG00000011113) #25 RNF11 (ENSNNAG00000011128) #28 TTC39A (ENSNNAG00000011153) #29 EPS15 (ENSNNAG00000011248) #30 ENSNNAG00000011439 #31 OSBPL9 (ENSNNAG00000011517) #32 ENSNNAG00000011679 #33 RAB3B (ENSNNAG00000011777) #34 TXNDC12 (ENSNNAG00000011791) #36 BTF3L4 (ENSNNAG00000011810) #37 ZFYVE9 (ENSNNAG00000011864) Elapidae_a ANCESTRAL SPECIES 7 ENSGT00390000011196 ENSGT00940000161527.c.b ENSGT00940000161527.d.a ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724.d #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Acanthophiinae ANCESTRAL SPECIES 5 ENSGT00940000161527.c.b ENSGT00940000161527.d.a ENSGT00980000201417 ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724.d #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Mainland tiger snake MODERN SPECIES 13 EFCAB14 (ENSNSUG00000016171) ENSNSUG00000016172 ENSNSUG00000016173 ENSNSUG00000016174 TAL1 (ENSNSUG00000016175) STIL (ENSNSUG00000016176) CMPK1 (ENSNSUG00000016179) ENSNSUG00000016180 FOXD2 (ENSNSUG00000016181) TRABD2B (ENSNSUG00000016185) #7 SLC5A9 (ENSNSUG00000016192) #9 SPATA6 (ENSNSUG00000016298) #11 ENSNSUG00000016299 #12 BEND5 (ENSNSUG00000016300) #13 ENSNSUG00000016301 #12 ELAVL4 (ENSNSUG00000016302) #22 DMRTA2 (ENSNSUG00000016323) #23 FAF1 (ENSNSUG00000016324) #24 CDKN2C (ENSNSUG00000016325) #25 TTC39A (ENSNSUG00000016326) #29 EPS15 (ENSNSUG00000016327) #30 ENSNSUG00000016329 #31 OSBPL9 (ENSNSUG00000016390) #32 ENSNSUG00000017629 #33 RAB3B (ENSNSUG00000018184) #34 TXNDC12 (ENSNSUG00000018185) #36 BTF3L4 (ENSNSUG00000018186) #37 ZFYVE9 (ENSNSUG00000018187) CC2D1B (ENSNSUG00000018188) ORC1 (ENSNSUG00000018308) PRPF38A (ENSNSUG00000018309) Eastern brown snake MODERN SPECIES 34 EFCAB14 (ENSPTXG00000001523) ENSPTXG00000001527 ENSPTXG00000001532 ENSPTXG00000001545 ENSPTXG00000001547 STIL (ENSPTXG00000001553) ENSPTXG00000001577 ENSPTXG00000001580 FOXD2 (ENSPTXG00000001582) TRABD2B (ENSPTXG00000001584) #7 SLC5A9 (ENSPTXG00000001588) #9 SPATA6 (ENSPTXG00000001592) #11 AGBL4 (ENSPTXG00000001598) #12 BEND5 (ENSPTXG00000001603) #13 ENSPTXG00000001605 ELAVL4 (ENSPTXG00000001627) #22 ENSPTXG00000001878 DMRTA2 (ENSPTXG00000001879) #23 FAF1 (ENSPTXG00000001880) #24 CDKN2C (ENSPTXG00000001881) #25 RNF11 (ENSPTXG00000001882) #28 TTC39A (ENSPTXG00000001883) #29 EPS15 (ENSPTXG00000001884) #30 ENSPTXG00000001890 #31 OSBPL9 (ENSPTXG00000001894) #32 ENSPTXG00000001900 #33 RAB3B (ENSPTXG00000001902) #34 TXNDC12 (ENSPTXG00000001903) #36 BTF3L4 (ENSPTXG00000001904) #37 ZFYVE9 (ENSPTXG00000001906) CC2D1B (ENSPTXG00000001910) Blue-lipped sea krait MODERN SPECIES 4911 ENSLLTG00000009030 ENSLLTG00000009019 #22 Lizard MODERN SPECIES 3 NSUN4 (ENSACAG00000043184) FAAH (ENSACAG00000002040) ENSACAG00000001984 ENSACAG00000028412 ENSACAG00000029353 ENSACAG00000001951 ENSACAG00000001932 ENSACAG00000001870 ENSACAG00000034956 ENSACAG00000001833 ENSACAG00000034569 ENSACAG00000041940 ENSACAG00000035349 #12 ENSACAG00000043345 ENSACAG00000037944 ELAVL4 (ENSACAG00000004527) #22 ENSACAG00000042237 DMRTA2 (ENSACAG00000007289) #23 FAF1 (ENSACAG00000007308) #24 CDKN2C (ENSACAG00000039282) #25 RNF11 (ENSACAG00000007410) #28 EPS15 (ENSACAG00000007433) #30 ENSACAG00000022598 #31 OSBPL9 (ENSACAG00000007574) #32 ENSACAG00000007741 #33 RAB3B (ENSACAG00000043816) #34 TXNDC12 (ENSACAG00000008073) #36 BTF3L4 (ENSACAG00000038457) #37 ZFYVE9 (ENSACAG00000008107) CC2D1B (ENSACAG00000008185) ORC1 (ENSACAG00000008199) tuatara MODERN SPECIES 1725 CYP4B1 (ENSSPUG00000009405) CYP4B35 (ENSSPUG00000009557) CYP4B36 (ENSSPUG00000009899) CYP4B37 (ENSSPUG00000010107) CYP4B38 (ENSSPUG00000010929) TAL1 (ENSSPUG00000011173) STIL (ENSSPUG00000011248) ENSSPUG00000011504 ENSSPUG00000011518 FOXD2 (ENSSPUG00000011531) SLC5A9 (ENSSPUG00000011544) #9 SPATA6 (ENSSPUG00000011583) #11 ENSSPUG00000011592 #12 ENSSPUG00000011602 #13 ENSSPUG00000011621 #12 ELAVL4 (ENSSPUG00000011636) #22 FAF1 (ENSSPUG00000011732) #24 CDKN2C (ENSSPUG00000011758) #25 RNF11 (ENSSPUG00000011773) #28 TTC39A (ENSSPUG00000011783) #29 EPS15 (ENSSPUG00000011819) #30 ENSSPUG00000011863 ##31 ENSSPUG00000011884 #32 OSBPL9 (ENSSPUG00000012142) #32 ENSSPUG00000013001 #33 RAB3B (ENSSPUG00000013039) #34 TXNDC12 (ENSSPUG00000013056) #36 BTF3L4 (ENSSPUG00000013095) #37 ZFYVE9 (ENSSPUG00000013150) CC2D1B (ENSSPUG00000013186) ORC1 (ENSSPUG00000013234) Archelosauria ANCESTRAL SPECIES 9 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Archosauria ANCESTRAL SPECIES 11 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Aves ANCESTRAL SPECIES 7 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Neognathae ANCESTRAL SPECIES 8 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Neognathae_b ANCESTRAL SPECIES 10 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Passeriformes ANCESTRAL SPECIES 8 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00390000002443 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Great tit MODERN SPECIES 28 ENSPMJG00000000189 ENSPMJG00000000216 PDZK1IP1 (ENSPMJG00000000226) TAL1 (ENSPMJG00000000238) STIL (ENSPMJG00000000254) ENSPMJG00000000275 FOXE1 (ENSPMJG00000000299) FOXD2 (ENSPMJG00000000414) TRABD2B (ENSPMJG00000000435) #7 SLC5A9 (ENSPMJG00000000463) #9 SPATA6 (ENSPMJG00000000488) #11 ENSPMJG00000000555 AGBL4 (ENSPMJG00000000580) #12 BEND5 (ENSPMJG00000000641) #13 ENSPMJG00000000668 ELAVL4 (ENSPMJG00000000678) #22 DMRTA2 (ENSPMJG00000000744) #23 FAF1 (ENSPMJG00000000748) #24 CDKN2C (ENSPMJG00000000777) #25 RNF11 (ENSPMJG00000000863) #28 TTC39A (ENSPMJG00000000876) #29 EPS15 (ENSPMJG00000000916) #30 OSBPL9 (ENSPMJG00000000976) #32 NRDC (ENSPMJG00000000992) #33 RAB3B (ENSPMJG00000001022) #34 TXNDC12 (ENSPMJG00000001041) #36 KTI12 (ENSPMJG00000001054) BTF3L4 (ENSPMJG00000001056) #37 ZFYVE9 (ENSPMJG00000001063) CC2D1B (ENSPMJG00000001070) ORC1 (ENSPMJG00000001082) Passeriformes_d ANCESTRAL SPECIES 9 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A.cb.a Passeriformes_g ANCESTRAL SPECIES 10 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A.cb.a Medium ground finch MODERN SPECIES 48 BEND5 (ENSGFOG00000004253) #13 ELAVL4 (ENSGFOG00000004297) #22 FAF1 (ENSGFOG00000004333) #24 CDKN2C (ENSGFOG00000004345) #25 ENSGFOG00000004350 TTC39A (ENSGFOG00000004364) #29 EPS15 (ENSGFOG00000004499) #30 OSBPL9 (ENSGFOG00000005258) #32 NRDC (ENSGFOG00000006315) #33 RAB3B (ENSGFOG00000008466) #34 TXNDC12 (ENSGFOG00000008474) #36 BTF3L4 (ENSGFOG00000008518) #37 ZFYVE9 (ENSGFOG00000008523) CC2D1B (ENSGFOG00000008541) ORC1 (ENSGFOG00000008581) PRPF38A (ENSGFOG00000008596) TUT4 (ENSGFOG00000008607) Passeroidea ANCESTRAL SPECIES 9 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A.cb.a Zebra finch MODERN SPECIES 30 ENSTGUG00000019172 EFCAB14 (ENSTGUG00000008408) ENSTGUG00000008418 ENSTGUG00000008524 PDZK1IP1 (ENSTGUG00000008532) TAL1 (ENSTGUG00000008542) STIL (ENSTGUG00000008545) ENSTGUG00000008563 ENSTGUG00000023854 FOXD2 (ENSTGUG00000023676) TRABD2B (ENSTGUG00000028844) #7 SLC5A9 (ENSTGUG00000028559) #9 SPATA6 (ENSTGUG00000025010) #11 AGBL4 (ENSTGUG00000008586) #12 BEND5 (ENSTGUG00000008591) #13 ELAVL4 (ENSTGUG00000008597) #22 DMRTA2 (ENSTGUG00000028863) #23 FAF1 (ENSTGUG00000008610) #24 CDKN2C (ENSTGUG00000026124) #25 RNF11 (ENSTGUG00000022215) #28 TTC39A (ENSTGUG00000008658) #29 EPS15 (ENSTGUG00000008685) #30 OSBPL9 (ENSTGUG00000008771) #32 NRDC (ENSTGUG00000008815) #33 RAB3B (ENSTGUG00000008894) #34 TXNDC12 (ENSTGUG00000008899) #36 BTF3L4 (ENSTGUG00000027297) #37 ZFYVE9 (ENSTGUG00000008916) CC2D1B (ENSTGUG00000008952) ORC1 (ENSTGUG00000008984) ENSTGUG00000008995 Common canary MODERN SPECIES 9 ATPAF1 (ENSSCAG00000003265) EFCAB14 (ENSSCAG00000003273) ENSSCAG00000003281 ENSSCAG00000003305 PDZK1IP1 (ENSSCAG00000003514) ENSSCAG00000003518 STIL (ENSSCAG00000003537) ENSSCAG00000003547 FOXE1 (ENSSCAG00000003549) TRABD2B (ENSSCAG00000003575) #7 SLC5A9 (ENSSCAG00000003587) #9 SPATA6 (ENSSCAG00000003616) #11 ENSSCAG00000003625 #12 BEND5 (ENSSCAG00000003637) #13 ENSSCAG00000003665 #12 ELAVL4 (ENSSCAG00000003671) #22 FAF1 (ENSSCAG00000003680) #24 CDKN2C (ENSSCAG00000003689) #25 ENSSCAG00000003699 TTC39A (ENSSCAG00000003706) #29 EPS15 (ENSSCAG00000003714) #30 OSBPL9 (ENSSCAG00000003797) #32 NRDC (ENSSCAG00000004323) #33 RAB3B (ENSSCAG00000005800) #34 TXNDC12 (ENSSCAG00000005806) #36 BTF3L4 (ENSSCAG00000005810) #37 ZFYVE9 (ENSSCAG00000005814) CC2D1B (ENSSCAG00000005820) ORC1 (ENSSCAG00000005826) PRPF38A (ENSSCAG00000005834) TUT4 (ENSSCAG00000005850) Flycatcher MODERN SPECIES 27 EFCAB14 (ENSFALG00000009363) ENSFALG00000009359 ENSFALG00000009327 PDZK1IP1 (ENSFALG00000009311) TAL1 (ENSFALG00000009303) STIL (ENSFALG00000009298) ENSFALG00000025721 ENSFALG00000009291 TRABD2B (ENSFALG00000005263) #7 SLC5A9 (ENSFALG00000005278) #9 ENSFALG00000025840 SPATA6 (ENSFALG00000005303) #11 ENSFALG00000005309 #12 BEND5 (ENSFALG00000005315) #13 AGBL4 (ENSFALG00000025862) #12 ELAVL4 (ENSFALG00000025747) #22 DMRTA2 (ENSFALG00000005353) #23 FAF1 (ENSFALG00000005360) #24 CDKN2C (ENSFALG00000005371) #25 ENSFALG00000005378 TTC39A (ENSFALG00000005395) #29 EPS15 (ENSFALG00000005442) #30 OSBPL9 (ENSFALG00000005477) #32 NRDC (ENSFALG00000005499) #33 RAB3B (ENSFALG00000005545) #34 TXNDC12 (ENSFALG00000027173) #36 BTF3L4 (ENSFALG00000023382) #37 ZFYVE9 (ENSFALG00000005568) CC2D1B (ENSFALG00000005577) ORC1 (ENSFALG00000005588) ENSFALG00000005598 Neognathae_c ANCESTRAL SPECIES 7 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A Golden eagle MODERN SPECIES 3 ENSACCG00020009272 ENSACCG00020009286 PDZK1IP1 (ENSACCG00020009303) TAL1 (ENSACCG00020009310) STIL (ENSACCG00020009378) ENSACCG00020009428 ENSACCG00020009431 ENSACCG00020009444 FOXD2 (ENSACCG00020009458) TRABD2B (ENSACCG00020009471) #7 ENSACCG00020009515 SPATA6 (ENSACCG00020009549) #11 ENSACCG00020009573 #12 BEND5 (ENSACCG00020009603) #13 ENSACCG00020009618 #12 ELAVL4 (ENSACCG00020009639) #22 DMRTA2 (ENSACCG00020009658) #23 FAF1 (ENSACCG00020009672) #24 CDKN2C (ENSACCG00020002458) #25 RNF11 (ENSACCG00020002601) #28 TTC39A (ENSACCG00020003801) #29 EPS15 (ENSACCG00020005155) #30 OSBPL9 (ENSACCG00020005731) #32 NRDC (ENSACCG00020006735) #33 RAB3B (ENSACCG00020007161) #34 TXNDC12 (ENSACCG00020007281) #36 BTF3L4 (ENSACCG00020007446) #37 ZFYVE9 (ENSACCG00020007605) CC2D1B (ENSACCG00020007951) ORC1 (ENSACCG00020008273) PRPF38A (ENSACCG00020008402) Kakapo MODERN SPECIES 25 ENSSHBG00005006437 PDZK1IP1 (ENSSHBG00005007075) TAL1 (ENSSHBG00005007088) STIL (ENSSHBG00005007114) ENSSHBG00005007170 ENSSHBG00005007192 FOXD2 (ENSSHBG00005007218) TRABD2B (ENSSHBG00005007228) #7 SLC5A9 (ENSSHBG00005007272) #9 ENSSHBG00005007346 #11 ENSSHBG00005007361 ENSSHBG00005007379 #11 ENSSHBG00005007400 #12 BEND5 (ENSSHBG00005007417) #13 ENSSHBG00005007432 #12 ELAVL4 (ENSSHBG00005007474) #22 DMRTA2 (ENSSHBG00005007507) #23 FAF1 (ENSSHBG00005007518) #24 CDKN2C (ENSSHBG00005007538) #25 RNF11 (ENSSHBG00005007556) #28 TTC39A (ENSSHBG00005007564) #29 EPS15 (ENSSHBG00005007582) #30 OSBPL9 (ENSSHBG00005007839) #32 NRDC (ENSSHBG00005008330) #33 RAB3B (ENSSHBG00005008352) #34 TXNDC12 (ENSSHBG00005008357) #36 BTF3L4 (ENSSHBG00005008362) #37 ZFYVE9 (ENSSHBG00005008377) CC2D1B (ENSSHBG00005008448) ORC1 (ENSSHBG00005008482) PRPF38A (ENSSHBG00005008500) Galloanserae ANCESTRAL SPECIES 8 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A Phasianidae ANCESTRAL SPECIES 7 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a.b #29 ENSGT00940000155751 #30 ENSGT00940000154690.hc.b #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A Japanese quail MODERN SPECIES 26 ATPAF1 (ENSCJPG00005010072) EFCAB14 (ENSCJPG00005010073) ENSCJPG00005010074 ENSCJPG00005010075 TAL1 (ENSCJPG00005010076) STIL (ENSCJPG00005010077) ENSCJPG00005010078 ENSCJPG00005010079 FOXD2 (ENSCJPG00005010080) TRABD2B (ENSCJPG00005010082) #7 SLC5A9 (ENSCJPG00005010085) #9 SPATA6 (ENSCJPG00005010270) #11 ENSCJPG00005010271 AGBL4 (ENSCJPG00005010272) #12 BEND5 (ENSCJPG00005010274) #13 ELAVL4 (ENSCJPG00005010275) #22 DMRTA2 (ENSCJPG00005010277) #23 FAF1 (ENSCJPG00005010278) #24 CDKN2C (ENSCJPG00005010445) #25 RNF11 (ENSCJPG00005010446) #28 TTC39A (ENSCJPG00005010447) #29 EPS15 (ENSCJPG00005010459) #30 OSBPL9 (ENSCJPG00005011698) #32 NRDC (ENSCJPG00005011887) #33 RAB3B (ENSCJPG00005011888) #34 TXNDC12 (ENSCJPG00005011890) #36 BTF3L4 (ENSCJPG00005011891) #37 ZFYVE9 (ENSCJPG00005011892) CC2D1B (ENSCJPG00005011893) ORC1 (ENSCJPG00005011895) PRPF38A (ENSCJPG00005011901) Phasianidae_b ANCESTRAL SPECIES 7 ENSGT00390000012765 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00940000163721 ENSGT00950000182917.a.b.a.b #29 ENSGT00940000155751 #30 ENSGT00940000154690.gc #32 ENSGT00940000154690.hc.b #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00530000063498.B ENSGT00730000111085.A Turkey MODERN SPECIES 1 ENSMGAG00000011197 ENSMGAG00000011113 #37 ENSMGAG00000018625 ENSMGAG00000011102 #36 ENSMGAG00000011090 RAB3B (ENSMGAG00000018796) #34 ENSMGAG00000011030 #32 ENSMGAG00000011057 #33 ENSMGAG00000019881 #32 EPS15 (ENSMGAG00000010996) #30 ENSMGAG00000022271 #29 ENSMGAG00000010980 ENSMGAG00000010982 #29 ENSMGAG00000022627 #25 ENSMGAG00000010948 #24 ELAVL4 (ENSMGAG00000010928) #22 ENSMGAG00000019230 #12 ENSMGAG00000010874 #13 ENSMGAG00000010855 #11 ENSMGAG00000010829 #9 ENSMGAG00000021374 #11 TRABD2B (ENSMGAG00000017913) #7 ENSMGAG00000010792 ENSMGAG00000010814 ENSMGAG00000010795 ENSMGAG00000010823 ENSMGAG00000010752 ENSMGAG00000010784 ENSMGAG00000010747 ENSMGAG00000010732 ENSMGAG00000010730 Chicken MODERN SPECIES 37 ATPAF1 (ENSGALG00010022867) EFCAB14 (ENSGALG00010022874) CYP4B7 (ENSGALG00010022917) PDZK1IP1 (ENSGALG00010022948) TAL1 (ENSGALG00010022991) STIL (ENSGALG00010024669) CMPK1 (ENSGALG00010024686) ENSGALG00010026936 TRABD2B (ENSGALG00010024695) #7 SLC5A9 (ENSGALG00010024728) #9 SPATA6 (ENSGALG00010024758) #11 ENSGALG00010024768 AGBL4 (ENSGALG00010027088) #12 BEND5 (ENSGALG00010024659) #13 ENSGALG00010024774 ELAVL4 (ENSGALG00010022760) #22 DMRTA2 (ENSGALG00010022784) #23 FAF1 (ENSGALG00010024514) #24 CDKN2C (ENSGALG00010024533) #25 RNF11 (ENSGALG00010024551) TTC39A (ENSGALG00010024588) #29 EPS15 (ENSGALG00010024596) #30 ENSGALG00010024599 #32 NRDC (ENSGALG00010024623) #33 OSBPL9 (ENSGALG00010027084) #32 RAB3B (ENSGALG00010024642) #34 TXNDC12 (ENSGALG00010024836) #36 BTF3L4 (ENSGALG00010024840) #37 ZFYVE9 (ENSGALG00010024842) ORC1 (ENSGALG00010024861) PRPF38A (ENSGALG00010024877) Anatidae ANCESTRAL SPECIES 5 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00990000204056 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A Duck MODERN SPECIES 26 ATPAF1 (ENSAPLG00000009308) EFCAB14 (ENSAPLG00000026113) ENSAPLG00000009571 STIL (ENSAPLG00000010138) ENSAPLG00000029939 ENSAPLG00000028912 TRABD2B (ENSAPLG00000007124) #7 ENSAPLG00000022301 SLC5A9 (ENSAPLG00000007144) #9 ENSAPLG00000020726 SPATA6 (ENSAPLG00000007793) #11 ENSAPLG00000007966 #12 BEND5 (ENSAPLG00000008052) #13 ENSAPLG00000018496 ENSAPLG00000023647 #12 ELAVL4 (ENSAPLG00000030449) #22 DMRTA2 (ENSAPLG00000029740) #23 FAF1 (ENSAPLG00000002930) #24 CDKN2C (ENSAPLG00000027339) #25 RNF11 (ENSAPLG00000022113) #28 TTC39A (ENSAPLG00000003729) #29 EPS15 (ENSAPLG00000004292) #30 OSBPL9 (ENSAPLG00000001003) #32 ENSAPLG00000002870 #33 RAB3B (ENSAPLG00000004148) #34 TXNDC12 (ENSAPLG00000022816) #36 BTF3L4 (ENSAPLG00000009079) #37 ZFYVE9 (ENSAPLG00000004605) ORC1 (ENSAPLG00000005106) PRPF38A (ENSAPLG00000005827) TUT4 (ENSAPLG00000006345) Pink-footed goose MODERN SPECIES 1 ATPAF1 (ENSABRG00000016766) EFCAB14 (ENSABRG00000016757) ENSABRG00000016721 ENSABRG00000016720 PDZK1IP1 (ENSABRG00000016718) TAL1 (ENSABRG00000016716) STIL (ENSABRG00000016714) ENSABRG00000016710 ENSABRG00000016705 TRABD2B (ENSABRG00000016692) #7 SLC5A9 (ENSABRG00000015750) #9 SPATA6 (ENSABRG00000015644) #11 ENSABRG00000015638 #12 BEND5 (ENSABRG00000015631) #13 AGBL4 (ENSABRG00000015624) #12 ELAVL4 (ENSABRG00000015613) #22 DMRTA2 (ENSABRG00000015596) #23 FAF1 (ENSABRG00000015320) #24 CDKN2C (ENSABRG00000015292) #25 RNF11 (ENSABRG00000015288) #28 TTC39A (ENSABRG00000015248) #29 EPS15 (ENSABRG00000014091) #30 OSBPL9 (ENSABRG00000011975) #32 ENSABRG00000008367 #33 RAB3B (ENSABRG00000008096) #34 TXNDC12 (ENSABRG00000008071) #36 BTF3L4 (ENSABRG00000008061) #37 ZFYVE9 (ENSABRG00000007459) CC2D1B (ENSABRG00000007260) ORC1 (ENSABRG00000007186) PRPF38A (ENSABRG00000007179) African ostrich MODERN SPECIES 556 ELAVL4 (ENSSCUG00000007535) #22 Australian saltwater crocodile MODERN SPECIES 28 ATPAF1 (ENSCPRG00005017958) ENSCPRG00005017961 EFCAB14 (ENSCPRG00005017964) ENSCPRG00005017973 ENSCPRG00005017986 ENSCPRG00005018022 TAL1 (ENSCPRG00005018024) STIL (ENSCPRG00005018027) ENSCPRG00005018033 TRABD2B (ENSCPRG00005018038) #7 SLC5A9 (ENSCPRG00005018045) #9 SPATA6 (ENSCPRG00005018049) #11 ENSCPRG00005018057 #12 BEND5 (ENSCPRG00005018063) #13 ENSCPRG00005018070 #12 ELAVL4 (ENSCPRG00005018078) #22 FAF1 (ENSCPRG00005018094) #24 CDKN2C (ENSCPRG00005018099) #25 ENSCPRG00005018102 TTC39A (ENSCPRG00005000251) #29 EPS15 (ENSCPRG00005000597) #30 OSBPL9 (ENSCPRG00005000700) #32 ENSCPRG00005000992 #33 RAB3B (ENSCPRG00005002515) #34 TXNDC12 (ENSCPRG00005002525) #36 BTF3L4 (ENSCPRG00005002529) #37 ZFYVE9 (ENSCPRG00005002533) CC2D1B (ENSCPRG00005002551) ORC1 (ENSCPRG00005002601) PRPF38A (ENSCPRG00005002609) TUT4 (ENSCPRG00005002633) Cryptodira ANCESTRAL SPECIES 8 ENSGT00940000161527.c.f ENSGT00940000161527.d.b.b ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000161273 #7 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000161441 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.a.a.a ##31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Emydidae ANCESTRAL SPECIES 22 ENSGT00390000011196 ENSGT00940000161527.c.e ENSGT00940000161527.c.f ENSGT00940000161441 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B ENSGT00730000111085.A Three-toed box turtle DUPLICATION Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 46 ENSTMTG00000008578 ENSTMTG00000008099 #9 ENSTMTG00000008048 #11 ENSTMTG00000008028 #12 ENSTMTG00000007936 #13 ENSTMTG00000007916 #12 ENSTMTG00000007902 #22 ENSTMTG00000007898 #22 ENSTMTG00000007877 #23 ENSTMTG00000007057 #24 ENSTMTG00000007006 #25 Three-toed box turtle MODERN SPECIES 46 ENSTMTG00000008578 ENSTMTG00000008099 #9 ENSTMTG00000008048 #11 ENSTMTG00000008028 #12 ENSTMTG00000007936 #13 ENSTMTG00000007916 #12 ENSTMTG00000007902 #22 ENSTMTG00000007898 #22 ENSTMTG00000007877 #23 ENSTMTG00000007057 #24 ENSTMTG00000007006 #25 Three-toed box turtle MODERN SPECIES 45 ENSTMTG00000006961 ENSTMTG00000006952 ENSTMTG00000006516 #9 ENSTMTG00000006448 #11 ENSTMTG00000006433 #12 ENSTMTG00000006380 #13 ENSTMTG00000006344 #12 ENSTMTG00000005832 #22 ENSTMTG00000005788 #23 ENSTMTG00000004990 #24 ENSTMTG00000004899 #25 painted turtle MODERN SPECIES 698 ENSCPBG00000009792 ENSCPBG00000009909 PDZK1IP1 (ENSCPBG00000009955) TAL1 (ENSCPBG00000009956) STIL (ENSCPBG00000009963) ENSCPBG00000009969 ENSCPBG00000009970 ENSCPBG00000009977 ENSCPBG00000009979 SLC5A9 (ENSCPBG00000009981) #9 SPATA6 (ENSCPBG00000009991) #11 ENSCPBG00000009998 #12 BEND5 (ENSCPBG00000010006) #13 ENSCPBG00000010011 #12 ENSCPBG00000010014 ELAVL4 (ENSCPBG00000010017) #22 DMRTA2 (ENSCPBG00000010018) #23 FAF1 (ENSCPBG00000010024) #24 CDKN2C (ENSCPBG00000010037) #25 RNF11 (ENSCPBG00000010042) #28 TTC39A (ENSCPBG00000010051) #29 EPS15 (ENSCPBG00000010066) #30 OSBPL9 (ENSCPBG00000010097) #32 ENSCPBG00000010301 #33 RAB3B (ENSCPBG00000012333) #34 Testudinidae ANCESTRAL SPECIES 33 ENSGT00940000161527.c.f ENSGT00940000161441 ENSGT00940000161527.d.b.a ENSGT00940000161527.d.a ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000163540 ENSGT00940000162270.a ENSGT00940000157140.b.a.b.a ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000155042.b.c #12 ENSGT00390000001724 #13 ENSGT00940000155042.b.d #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.a.a.a ##31 ENSGT00940000154690 #32 ENSGT00940000155026.k.a.a #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Abingdon island giant tortoise MODERN SPECIES 2513 ENSCABG00000003804 #12 ELAVL4 (ENSCABG00000003809) #22 Goode s thornscrub tortoise MODERN SPECIES 22 ENSGEVG00005019451 ENSGEVG00005019318 ENSGEVG00005019175 ENSGEVG00005018800 PDZK1IP1 (ENSGEVG00005018742) TAL1 (ENSGEVG00005018730) STIL (ENSGEVG00005018571) ENSGEVG00005018548 ENSGEVG00005018529 FOXD2 (ENSGEVG00005018509) SLC5A9 (ENSGEVG00005018452) #9 SPATA6 (ENSGEVG00005018413) #11 ENSGEVG00005018360 #12 BEND5 (ENSGEVG00005018332) #13 ENSGEVG00005018302 #12 ELAVL4 (ENSGEVG00005017971) #22 DMRTA2 (ENSGEVG00005017905) #23 FAF1 (ENSGEVG00005017857) #24 CDKN2C (ENSGEVG00005017834) #25 RNF11 (ENSGEVG00005017825) #28 TTC39A (ENSGEVG00005016642) #29 EPS15 (ENSGEVG00005016380) #30 OSBPL9 (ENSGEVG00005016164) #32 ENSGEVG00005015994 #33 RAB3B (ENSGEVG00005015931) #34 TXNDC12 (ENSGEVG00005015860) #36 BTF3L4 (ENSGEVG00005015799) #37 ZFYVE9 (ENSGEVG00005015772) CC2D1B (ENSGEVG00005015662) ORC1 (ENSGEVG00005015593) PRPF38A (ENSGEVG00005015566) Chinese turtle MODERN SPECIES 1294 ENSPSIG00000012049 ENSPSIG00000010643 TAL1 (ENSPSIG00000010614) STIL (ENSPSIG00000010417) ENSPSIG00000010159 ENSPSIG00000010073 ENSPSIG00000010057 #7 ENSPSIG00000000303 ENSPSIG00000000298 SLC5A9 (ENSPSIG00000009335) #9 SPATA6 (ENSPSIG00000009039) #11 ENSPSIG00000008990 #12 ENSPSIG00000000294 BEND5 (ENSPSIG00000008975) #13 ENSPSIG00000000289 ELAVL4 (ENSPSIG00000008545) #22 ENSPSIG00000008525 FAF1 (ENSPSIG00000006306) #24 CDKN2C (ENSPSIG00000006283) #25 RNF11 (ENSPSIG00000006280) #28 TTC39A (ENSPSIG00000017765) #29 EPS15 (ENSPSIG00000015754) #30 OSBPL9 (ENSPSIG00000014233) #32 ENSPSIG00000009906 #33 ENSPSIG00000009351 #34 ENSPSIG00000000608 #34 TXNDC12 (ENSPSIG00000009183) #36 BTF3L4 (ENSPSIG00000007609) #37 ZFYVE9 (ENSPSIG00000006343) CC2D1B (ENSPSIG00000005729) PRPF38A (ENSPSIG00000017487) Anura ANCESTRAL SPECIES 6 ENSGT00940000161527.a.b.a ENSGT00940000161527.b ENSGT00940000161527.a.b.b ENSGT00940000154660.b ENSGT00940000159889 ENSGT00390000007310 ENSGT00940000160589 ENSGT00940000162270 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #7 ENSGT00940000157546 #9 ENSGT00530000063821.b.a #11 ENSGT00940000175969 ENSGT00390000001724 #13 ENSGT00940000155042.b #12 ENSGT00940000157399 #22 ENSGT00940000161649 #23 ENSGT00940000154831 #24 ENSGT00940000160194 #25 ENSGT00730000110988 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a #31 ENSGT00940000154690 #32 ENSGT00940000155026 #33 ENSGT00940000159943 #34 ENSGT00530000063273.a #36 ENSGT00940000154296 #37 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Frog MODERN SPECIES 4 pdzk1ip1 (ENSXETG00000032460) tal1 (ENSXETG00000041260) stil (ENSXETG00000016343) cmpk1 (ENSXETG00000043840) foxe3 (ENSXETG00000016339) foxd2 (ENSXETG00000047367) ENSXETG00000037072 trabd2b (ENSXETG00000035683) #7 slc5a9 (ENSXETG00000006935) #9 ENSXETG00000042521 ENSXETG00000044812 ENSXETG00000042689 #11 ENSXETG00000037622 agbl4 (ENSXETG00000008687) #13 ENSXETG00000035079 ppp1r26 (ENSXETG00000008680) #22 dmrta2 (ENSXETG00000002846) #23 faf1 (ENSXETG00000002841) #24 cdkn2c (ENSXETG00000033220) #25 rnf11 (ENSXETG00000002837) #28 ttc39a (ENSXETG00000002835) #29 eps15 (ENSXETG00000002833) #30 actr3 (ENSXETG00000002832) osbpl9 (ENSXETG00000002831) #32 nrdc (ENSXETG00000008054) #33 rab3b (ENSXETG00000008055) #34 txndc12 (ENSXETG00000039370) #36 btf3l4 (ENSXETG00000008056) #37 zfyve9 (ENSXETG00000008057) ENSXETG00000048299 cc2d1b (ENSXETG00000008058) Leishan spiny toad MODERN SPECIES 11 FOXD2 (ENSLLEG00000028734) TRABD2B (ENSLLEG00000028753) #7 ENSLLEG00000028776 ENSLLEG00000028790 #9 ENSLLEG00000028872 #9 ENSLLEG00000029040 SPATA6 (ENSLLEG00000029043) #11 ENSLLEG00000029090 ENSLLEG00000029098 BEND5 (ENSLLEG00000029117) #13 ENSLLEG00000029132 ENSLLEG00000029143 ENSLLEG00000029154 ENSLLEG00000029162 ENSLLEG00000029175 #12 ELAVL4 (ENSLLEG00000029217) #22 DMRTA2 (ENSLLEG00000029483) #23 ENSLLEG00000029835 CDKN2C (ENSLLEG00000029841) #25 RNF11 (ENSLLEG00000029850) #28 TTC39A (ENSLLEG00000029871) #29 EPS15 (ENSLLEG00000029949) #30 ENSLLEG00000030037 #31 OSBPL9 (ENSLLEG00000030207) #32 NRDC (ENSLLEG00000030530) #33 RAB3B (ENSLLEG00000030594) #34 TXNDC12 (ENSLLEG00000030607) #36 BTF3L4 (ENSLLEG00000030622) #37 ZFYVE9 (ENSLLEG00000030631) CC2D1B (ENSLLEG00000030657) ORC1 (ENSLLEG00000030678) Coelacanth MODERN SPECIES 1206 ELAVL4 (ENSLACG00000008316) #22 ENSLACG00000009510 ENSLACG00000010633 DMRTA2 (ENSLACG00000012046) #23 ENSLACG00000013090