Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Primates ANCESTRAL SPECIES 4 ENSGT00940000160927.e ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000160927.f ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Simiiformes ANCESTRAL SPECIES 3 ENSGT00940000160927.f ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 ENSGT00940000154296.jb.a #35 ENSGT00940000154290.a ENSGT00390000009595.a Catarrhini ANCESTRAL SPECIES 3 ENSGT00940000160927.f ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 Gibbon MODERN SPECIES 2 ENSNLEG00000030967 #7 TEX38 (ENSNLEG00000016440) #8 EFCAB14 (ENSNLEG00000016421) #9 ENSNLEG00000016409 #10 PDZK1IP1 (ENSNLEG00000016402) #11 ENSNLEG00000027215 #12 STIL (ENSNLEG00000016386) #13 ENSNLEG00000016374 #14 ENSNLEG00000016372 #15 ENSNLEG00000034414 #16 SLC5A9 (ENSNLEG00000016351) #17 ENSNLEG00000036336 #18 SPATA6 (ENSNLEG00000016340) #19 AGBL4 (ENSNLEG00000016327) #20 BEND5 (ENSNLEG00000033925) #21 ELAVL4 (ENSNLEG00000016303) #22 ENSNLEG00000032288 #23 ENSNLEG00000027959 #24 FAF1 (ENSNLEG00000016263) #25 CDKN2C (ENSNLEG00000016259) #26 ENSNLEG00000029189 #27 ENSNLEG00000033471 #28 TTC39A (ENSNLEG00000016232) #29 ENSNLEG00000016192 #30 OSBPL9 (ENSNLEG00000016138) #31 NRDC (ENSNLEG00000016067) #32 RAB3B (ENSNLEG00000016065) #33 TXNDC12 (ENSNLEG00000034609) #34 BTF3L4 (ENSNLEG00000016041) #35 ENSNLEG00000016013 #36 STX6 (ENSNLEG00000016021) #37 Hominidae ANCESTRAL SPECIES 3 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00940000160927.f ENSGT00940000163504.a.a #10 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 Gorilla MODERN SPECIES ENSGGOG00000021983 #10 CYP4X1 (ENSGGOG00000000133) ENSGGOG00000001801 ENSGGOG00000015363 #10 PDZK1IP1 (ENSGGOG00000011765) #11 TAL1 (ENSGGOG00000043148) #12 STIL (ENSGGOG00000000512) #13 ENSGGOG00000039974 #14 TRABD2B (ENSGGOG00000037702) #15 ENSGGOG00000044020 #16 SLC5A9 (ENSGGOG00000012140) #17 ENSGGOG00000028320 #18 SPATA6 (ENSGGOG00000001284) #19 AGBL4 (ENSGGOG00000043434) #20 BEND5 (ENSGGOG00000003566) #21 ELAVL4 (ENSGGOG00000000634) #22 ENSGGOG00000024575 #23 ENSGGOG00000013269 #24 FAF1 (ENSGGOG00000013273) #25 CDKN2C (ENSGGOG00000017023) #26 C1orf185 (ENSGGOG00000015902) ENSGGOG00000040829 RNF11 (ENSGGOG00000004919) ENSGGOG00000025934 TTC39A (ENSGGOG00000012965) #29 EPS15 (ENSGGOG00000006160) #30 OSBPL9 (ENSGGOG00000004787) #31 NRDC (ENSGGOG00000004793) #32 RAB3B (ENSGGOG00000001562) #33 TXNDC12 (ENSGGOG00000010208) #34 BTF3L4 (ENSGGOG00000010677) #35 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00940000160927.f ENSGT00940000163504.b #10 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 Human MODERN SPECIES CYP4A11 (ENSG00000187048) #10 CYP4X1 (ENSG00000186377) CYP4Z1 (ENSG00000186160) CYP4A22 (ENSG00000162365) #10 PDZK1IP1 (ENSG00000162366) #11 TAL1 (ENSG00000162367) #12 STIL (ENSG00000123473) #13 CMPK1 (ENSG00000162368) #14 FOXE3 (ENSG00000186790) FOXD2 (ENSG00000186564) TRABD2B (ENSG00000269113) #15 SLC5A9 (ENSG00000117834) #17 SPATA6 (ENSG00000132122) #19 AGBL4 (ENSG00000186094) #20 BEND5 (ENSG00000162373) #21 ELAVL4 (ENSG00000162374) #22 DMRTA2 (ENSG00000142700) #24 FAF1 (ENSG00000185104) #25 CDKN2C (ENSG00000123080) #26 C1orf185 (ENSG00000204006) RNF11 (ENSG00000123091) TTC39A (ENSG00000085831) #29 EPS15 (ENSG00000085832) #30 OSBPL9 (ENSG00000117859) #31 NRDC (ENSG00000078618) #32 RAB3B (ENSG00000169213) #33 TXNDC12 (ENSG00000117862) #34 KTI12 (ENSG00000198841) BTF3L4 (ENSG00000134717) #35 ZFYVE9 (ENSG00000157077) CC2D1B (ENSG00000154222) Pan ANCESTRAL SPECIES ENSGT00940000160927.f ENSGT00940000163504.b #10 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296.jb.a.f.a #35 Bonobo MODERN SPECIES CYP4B1 (ENSPPAG00000033977) CYP4A11 (ENSPPAG00000040374) #10 CYP4X1 (ENSPPAG00000034593) CYP4Z1 (ENSPPAG00000033041) CYP4A22 (ENSPPAG00000030867) #10 PDZK1IP1 (ENSPPAG00000032727) #11 TAL1 (ENSPPAG00000033189) #12 STIL (ENSPPAG00000037591) #13 ENSPPAG00000027235 #14 TRABD2B (ENSPPAG00000015081) #15 SLC5A9 (ENSPPAG00000034646) #17 ENSPPAG00000009942 #18 SPATA6 (ENSPPAG00000028728) #19 AGBL4 (ENSPPAG00000033362) #20 BEND5 (ENSPPAG00000040466) #21 ELAVL4 (ENSPPAG00000042402) #22 ENSPPAG00000023840 ENSPPAG00000035672 #23 ENSPPAG00000033541 #24 FAF1 (ENSPPAG00000032838) #25 CDKN2C (ENSPPAG00000038172) #26 C1orf185 (ENSPPAG00000024891) ENSPPAG00000032042 RNF11 (ENSPPAG00000039746) TTC39A (ENSPPAG00000031439) #29 EPS15 (ENSPPAG00000033044) #30 OSBPL9 (ENSPPAG00000021541) #31 NRDC (ENSPPAG00000034186) #32 RAB3B (ENSPPAG00000044044) #33 TXNDC12 (ENSPPAG00000044043) #34 ENSPPAG00000042598 Chimpanzee MODERN SPECIES CYP4Z1 (ENSPTRG00000000707) ENSPTRG00000000708 #10 PDZK1IP1 (ENSPTRG00000000709) #11 TAL1 (ENSPTRG00000051380) #12 STIL (ENSPTRG00000000711) #13 CMPK1 (ENSPTRG00000000712) #14 FOXE3 (ENSPTRG00000030618) FOXD2 (ENSPTRG00000030617) TRABD2B (ENSPTRG00000052213) #15 ENSPTRG00000043073 #16 SLC5A9 (ENSPTRG00000000716) #17 ENSPTRG00000048491 #18 SPATA6 (ENSPTRG00000000718) #19 AGBL4 (ENSPTRG00000043865) #20 BEND5 (ENSPTRG00000000721) #21 ELAVL4 (ENSPTRG00000000723) #22 ENSPTRG00000051295 ENSPTRG00000051047 #23 DMRTA2 (ENSPTRG00000000724) #24 FAF1 (ENSPTRG00000000725) #25 CDKN2C (ENSPTRG00000000726) #26 C1H1orf185 (ENSPTRG00000030611) ENSPTRG00000046419 RNF11 (ENSPTRG00000041089) TTC39A (ENSPTRG00000000728) #29 EPS15 (ENSPTRG00000000729) #30 OSBPL9 (ENSPTRG00000000730) #31 NRDC (ENSPTRG00000000731) #32 RAB3B (ENSPTRG00000000732) #33 TXNDC12 (ENSPTRG00000000733) #34 BTF3L4 (ENSPTRG00000000735) #35 Orangutan MODERN SPECIES CYP4B1 (ENSPPYG00000001387) CYP4A22 (ENSPPYG00000001385) #10 CYP4X1 (ENSPPYG00000001384) CYP4Z1 (ENSPPYG00000001386) PDZK1IP1 (ENSPPYG00000001383) #11 ENSPPYG00000035408 #12 STIL (ENSPPYG00000001381) #13 CMPK1 (ENSPPYG00000001380) #14 FOXD2 (ENSPPYG00000001378) TRABD2B (ENSPPYG00000001376) #15 SLC5A9 (ENSPPYG00000001373) #17 SPATA6 (ENSPPYG00000001372) #19 BEND5 (ENSPPYG00000001371) #21 ENSPPYG00000038734 AGBL4 (ENSPPYG00000001368) #20 ELAVL4 (ENSPPYG00000001367) #22 DMRTA2 (ENSPPYG00000001366) #24 FAF1 (ENSPPYG00000029417) #25 CDKN2C (ENSPPYG00000001365) #26 C1orf185 (ENSPPYG00000001364) ENSPPYG00000039022 ENSPPYG00000001362 RNF11 (ENSPPYG00000040291) TTC39A (ENSPPYG00000001360) #29 EPS15 (ENSPPYG00000001359) #30 OSBPL9 (ENSPPYG00000001358) #31 NRDC (ENSPPYG00000001357) #32 RAB3B (ENSPPYG00000040594) #33 TXNDC12 (ENSPPYG00000001354) #34 BTF3L4 (ENSPPYG00000001353) ##35 ENSPPYG00000033286 Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000155173 ENSGT00940000160927.e ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 ENSGT00940000154690.ub.b #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 Rhinopithecus ANCESTRAL SPECIES 703 ENSGT00940000157399 #22 ENSGT00940000154326.a.a.h ENSGT00940000153117.B.c.a.r.b #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 Golden snub-nosed monkey MODERN SPECIES 809 ELAVL4 (ENSRROG00000044786) #22 ENSRROG00000039410 ENSRROG00000045215 #23 DMRTA2 (ENSRROG00000013168) #24 FAF1 (ENSRROG00000035565) #25 Black snub-nosed monkey MODERN SPECIES 449 ELAVL4 (ENSRBIG00000043810) #22 ENSRBIG00000030797 ENSRBIG00000031795 #23 DMRTA2 (ENSRBIG00000031089) #24 FAF1 (ENSRBIG00000033052) #25 ENSRBIG00000029162 ADCYAP1 (ENSRBIG00000033794) ENSRBIG00000040234 ENOSF1 (ENSRBIG00000034196) TYMS (ENSRBIG00000040749) CLUL1 (ENSRBIG00000030751) CETN1 (ENSRBIG00000006152) COLEC12 (ENSRBIG00000032206) THOC1 (ENSRBIG00000033738) USP14 (ENSRBIG00000044842) ROCK1 (ENSRBIG00000028817) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000160927.e ENSGT00940000163504.d #10 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 ENSGT00940000154690.ub.b #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296.jb.a #35 Vervet Monkey MODERN SPECIES 12 CYP4A22 (ENSCSAG00000001245) #10 ENSCSAG00000000142 PDZK1IP1 (ENSCSAG00000001246) #11 TAL1 (ENSCSAG00000001247) #12 STIL (ENSCSAG00000001248) #13 CMPK1 (ENSCSAG00000001249) #14 FOXE3 (ENSCSAG00000000143) FOXD2 (ENSCSAG00000000144) TRABD2B (ENSCSAG00000001250) #15 ENSCSAG00000001251 ##16 ENSCSAG00000001252 #16 SLC5A9 (ENSCSAG00000001253) #17 SPATA6 (ENSCSAG00000001254) #19 ENSCSAG00000001255 #20 BEND5 (ENSCSAG00000001256) #21 ELAVL4 (ENSCSAG00000001257) #22 ENSCSAG00000001258 DMRTA2 (ENSCSAG00000001259) #24 FAF1 (ENSCSAG00000001260) #25 CDKN2C (ENSCSAG00000001261) #26 C1orf185 (ENSCSAG00000001262) RNF11 (ENSCSAG00000001264) TTC39A (ENSCSAG00000001265) #29 EPS15 (ENSCSAG00000001266) #30 OSBPL9 (ENSCSAG00000001267) #31 NRDC (ENSCSAG00000001268) #32 RAB3B (ENSCSAG00000001269) #33 TXNDC12 (ENSCSAG00000001270) #34 BTF3L4 (ENSCSAG00000001271) #35 ENSCSAG00000001272 ZFYVE9 (ENSCSAG00000001273) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000163504.c.a #10 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00910000146631 #27 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 Macaca ANCESTRAL SPECIES ENSGT00940000163504.c.a #10 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589.g.b #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00910000146631 #27 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690.ub.b #31 ENSGT00940000155026 #32 Macaca_a ANCESTRAL SPECIES ENSGT00940000163504.c.b #10 ENSGT00940000160927.e ENSGT00940000163504.c.a #10 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589.h #14 ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.b.b.d ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT01030000238095.a.a.b.b ENSGT00940000163721 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 ENSGT00940000154690.ub.b #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00980000202150.b Crab-eating macaque MODERN SPECIES CYP4A11 (ENSMFAG00000032544) #10 CYP4X1 (ENSMFAG00000000631) CYP4A45P (ENSMFAG00000042796) #10 PDZK1IP1 (ENSMFAG00000002324) #11 TAL1 (ENSMFAG00000047639) #12 ENSMFAG00000063835 STIL (ENSMFAG00000024408) #13 ENSMFAG00000035854 #14 TRABD2B (ENSMFAG00000003902) #15 ENSMFAG00000003658 ##16 ENSMFAG00000049065 #16 SLC5A9 (ENSMFAG00000035463) #17 ENSMFAG00000051495 ENSMFAG00000030500 AGBL4 (ENSMFAG00000032630) #20 ELAVL4 (ENSMFAG00000039866) #22 ENSMFAG00000020472 DMRTA2 (ENSMFAG00000062675) #24 FAF1 (ENSMFAG00000031563) #25 CDKN2C (ENSMFAG00000024172) #26 C1orf185 (ENSMFAG00000000049) ENSMFAG00000003545 ENSMFAG00000047249 ENSMFAG00000003664 #28 TTC39A (ENSMFAG00000037823) #29 ENSMFAG00000053090 ENSMFAG00000038258 EPS15 (ENSMFAG00000044060) #30 OSBPL9 (ENSMFAG00000043512) #31 NRDC (ENSMFAG00000036148) #32 RAB3B (ENSMFAG00000056941) #33 Rhesus MODERN SPECIES CYP4A45 (ENSMMUG00000019871) #10 CYP4X1 (ENSMMUG00000018867) CYP4A11 (ENSMMUG00000032143) #10 PDZK1IP1 (ENSMMUG00000061850) #12 STIL (ENSMMUG00000020389) #13 CMPK1 (ENSMMUG00000017375) #14 FOXE3 (ENSMMUG00000064635) FOXD2 (ENSMMUG00000018556) ENSMMUG00000057159 TRABD2B (ENSMMUG00000032139) #15 ENSMMUG00000049296 SLC5A9 (ENSMMUG00000007558) #17 SPATA6 (ENSMMUG00000009282) #19 ENSMMUG00000056990 BEND5 (ENSMMUG00000008828) #20 ELAVL4 (ENSMMUG00000021933) #22 DMRTA2 (ENSMMUG00000052908) #24 FAF1 (ENSMMUG00000019056) #25 CDKN2C (ENSMMUG00000019057) #26 C1H1orf185 (ENSMMUG00000006651) ENSMMUG00000058388 RNF11 (ENSMMUG00000012112) #28 TTC39A (ENSMMUG00000004564) #29 ENSMMUG00000058438 ENSMMUG00000043311 EPS15 (ENSMMUG00000012055) #30 OSBPL9 (ENSMMUG00000004735) #31 NRDC (ENSMMUG00000004738) #32 ENSMMUG00000047290 RAB3B (ENSMMUG00000014035) #33 ENSMMUG00000061924 Pig-tailed macaque MODERN SPECIES 217 ENSMNEG00000026248 #10 PDZK1IP1 (ENSMNEG00000034766) #11 TAL1 (ENSMNEG00000043031) #12 STIL (ENSMNEG00000044743) #13 CMPK1 (ENSMNEG00000037131) #14 FOXE3 (ENSMNEG00000009558) FOXD2 (ENSMNEG00000024922) TRABD2B (ENSMNEG00000028952) #15 ENSMNEG00000023828 ##16 ENSMNEG00000042343 #16 SLC5A9 (ENSMNEG00000028284) #17 SPATA6 (ENSMNEG00000036437) #19 AGBL4 (ENSMNEG00000028894) #20 BEND5 (ENSMNEG00000030902) #21 ENSMNEG00000030170 ELAVL4 (ENSMNEG00000035576) #22 ENSMNEG00000021112 ENSMNEG00000014551 ENSMNEG00000029667 #23 DMRTA2 (ENSMNEG00000036377) #24 FAF1 (ENSMNEG00000029437) #25 CDKN2C (ENSMNEG00000031706) #26 ENSMNEG00000039144 #27 ENSMNEG00000042352 C1orf185 (ENSMNEG00000034636) ENSMNEG00000043444 RNF11 (ENSMNEG00000044248) TTC39A (ENSMNEG00000043223) #29 EPS15 (ENSMNEG00000032927) #30 ENSMNEG00000044016 OSBPL9 (ENSMNEG00000045152) #31 Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00940000160927.e ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00910000146631 #27 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 Cercopithecinae_d ANCESTRAL SPECIES 19 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000157399 #22 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000154326.a.a.h.f ENSGT00940000153117.B.c.a.r.b.a #23 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00910000146631 #27 ENSGT00390000008296.b.a.b.c.a.a ENSGT00390000000797 ENSGT00950000183000.c.a.a.i.a.a.b.a.a.c.a.a ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00950000183073.b.p ENSGT00940000154319.u.b.b ENSGT00940000155751 #30 Sooty mangabey MODERN SPECIES 357 ENSCATG00000037935 #21 ENSCATG00000033836 ENSCATG00000037973 #20 ELAVL4 (ENSCATG00000029867) #22 ENSCATG00000043475 ENSCATG00000036372 ENSCATG00000033016 #23 DMRTA2 (ENSCATG00000036373) #24 FAF1 (ENSCATG00000006210) #25 ENSCATG00000030251 #27 CDKN2C (ENSCATG00000028763) #26 C1orf185 (ENSCATG00000035564) ENSCATG00000033774 RNF11 (ENSCATG00000015957) TTC39A (ENSCATG00000037731) #29 ENSCATG00000040273 ENSCATG00000034910 EPS15 (ENSCATG00000040033) #30 Drill MODERN SPECIES 285 ENSMLEG00000035489 ELAVL4 (ENSMLEG00000028616) #22 ENSMLEG00000026564 ENSMLEG00000032385 ENSMLEG00000003360 #23 DMRTA2 (ENSMLEG00000021929) #24 FAF1 (ENSMLEG00000028226) #25 Olive baboon MODERN SPECIES ENSPANG00000039694 #10 ENSPANG00000044971 PDZK1IP1 (ENSPANG00000035359) #11 TAL1 (ENSPANG00000009893) #12 STIL (ENSPANG00000020258) #13 CMPK1 (ENSPANG00000019968) #14 FOXE3 (ENSPANG00000011983) FOXD2 (ENSPANG00000017227) TRABD2B (ENSPANG00000012233) #15 ENSPANG00000001010 ##16 ENSPANG00000011532 #16 ENSPANG00000005788 ENSPANG00000021593 SPATA6 (ENSPANG00000014017) #19 AGBL4 (ENSPANG00000034366) #20 ELAVL4 (ENSPANG00000017754) #22 ENSPANG00000033296 DMRTA2 (ENSPANG00000012592) #24 FAF1 (ENSPANG00000015883) #25 CDKN2C (ENSPANG00000035708) #26 C1orf185 (ENSPANG00000005045) ENSPANG00000029418 RNF11 (ENSPANG00000019410) TTC39A (ENSPANG00000018680) #29 EPS15 (ENSPANG00000002942) #30 ENSPANG00000032379 ENSPANG00000039561 OSBPL9 (ENSPANG00000005884) #31 NRDC (ENSPANG00000017224) #32 RAB3B (ENSPANG00000018024) #33 TXNDC12 (ENSPANG00000024234) #34 Platyrrhini ANCESTRAL SPECIES ENSGT00940000163504 #10 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296.kb ##35 ENSGT00940000154295.y.a.a.b ENSGT00940000154290.a ENSGT00390000013722.ab Cebidae ANCESTRAL SPECIES 1 ENSGT00940000163504 #10 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296.kb ##35 ENSGT00940000154290.a ENSGT00390000013722.ab ENSGT00390000009595.a Marmoset MODERN SPECIES 19 ENSCJAG00000062966 #10 ENSCJAG00000083949 PDZK1IP1 (ENSCJAG00000046011) #11 TAL1 (ENSCJAG00000053562) #12 STIL (ENSCJAG00000021228) #13 CMPK1 (ENSCJAG00000021250) #14 FOXE3 (ENSCJAG00000038878) FOXD2 (ENSCJAG00000021263) ENSCJAG00000071656 TRABD2B (ENSCJAG00000042725) #15 SLC5A9 (ENSCJAG00000021271) #17 SPATA6 (ENSCJAG00000039778) #19 ENSCJAG00000081866 BEND5 (ENSCJAG00000021284) #21 ENSCJAG00000078422 ELAVL4 (ENSCJAG00000013725) #22 FAF1 (ENSCJAG00000021555) #25 DMRTA2 (ENSCJAG00000041134) #24 CDKN2C (ENSCJAG00000060144) #26 ENSCJAG00000076266 ENSCJAG00000081094 C1orf185 (ENSCJAG00000021565) ENSCJAG00000077996 RNF11 (ENSCJAG00000071727) TTC39A (ENSCJAG00000021569) #29 EPS15 (ENSCJAG00000021570) #30 ENSCJAG00000071627 ENSCJAG00000038925 ENSCJAG00000071526 OSBPL9 (ENSCJAG00000021574) #31 NRDC (ENSCJAG00000021578) #32 Cebidae_a ANCESTRAL SPECIES ENSGT00940000163504 #10 ENSGT00940000160927.e ENSGT00940000160927.f ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296.kb ##35 ENSGT00940000154290.a ENSGT00390000013722.ab ENSGT00390000009595.a Capuchin MODERN SPECIES 214 ENSCCAG00000027782 #20 ELAVL4 (ENSCCAG00000024797) #22 DMRTA2 (ENSCCAG00000026118) #24 FAF1 (ENSCCAG00000024129) #25 ENSCCAG00000027169 CDKN2C (ENSCCAG00000020423) #26 ENSCCAG00000020651 ENSCCAG00000024446 C1orf185 (ENSCCAG00000035941) RNF11 (ENSCCAG00000021392) TTC39A (ENSCCAG00000029112) #29 EPS15 (ENSCCAG00000020337) #30 ENSCCAG00000022769 #31 NRDC (ENSCCAG00000035997) #32 RAB3B (ENSCCAG00000035544) #33 TXNDC12 (ENSCCAG00000021353) #34 BTF3L4 (ENSCCAG00000034219) #35 Bolivian squirrel monkey MODERN SPECIES 45 ENSSBOG00000033087 CHD2 (ENSSBOG00000023754) RGMA (ENSSBOG00000023291) MCTP2 (ENSSBOG00000029271) NR2F2 (ENSSBOG00000020466) ENSSBOG00000035852 PDZK1IP1 (ENSSBOG00000033779) #11 STIL (ENSSBOG00000035433) #13 CMPK1 (ENSSBOG00000023132) #14 TRABD2B (ENSSBOG00000021713) #15 SLC5A9 (ENSSBOG00000031062) #17 ENSSBOG00000034864 #18 SPATA6 (ENSSBOG00000026364) #19 BEND5 (ENSSBOG00000015358) #21 AGBL4 (ENSSBOG00000031864) #20 ELAVL4 (ENSSBOG00000022965) #22 DMRTA2 (ENSSBOG00000025121) #24 ENSSBOG00000029666 ENSSBOG00000035179 ENSSBOG00000031899 ENSSBOG00000024407 ENSSBOG00000021083 FAF1 (ENSSBOG00000035904) #25 CDKN2C (ENSSBOG00000035100) #26 C1orf185 (ENSSBOG00000034584) RNF11 (ENSSBOG00000029247) TTC39A (ENSSBOG00000034095) #29 EPS15 (ENSSBOG00000021478) #30 OSBPL9 (ENSSBOG00000022113) #31 ENSSBOG00000000079 #32 RAB3B (ENSSBOG00000011518) #33 Mas night monkey MODERN SPECIES 679 CYP4A11 (ENSANAG00000019404) #10 ENSANAG00000035850 CYP4X1 (ENSANAG00000034247) CYP4Z1 (ENSANAG00000032825) PDZK1IP1 (ENSANAG00000037310) #11 TAL1 (ENSANAG00000018338) #12 STIL (ENSANAG00000025280) #13 CMPK1 (ENSANAG00000033187) #14 FOXE3 (ENSANAG00000019840) TRABD2B (ENSANAG00000036722) #15 SLC5A9 (ENSANAG00000022766) #17 SPATA6 (ENSANAG00000033722) #19 BEND5 (ENSANAG00000018794) #21 AGBL4 (ENSANAG00000022272) #20 ENSANAG00000031055 ELAVL4 (ENSANAG00000030598) #22 DMRTA2 (ENSANAG00000033164) #24 ENSANAG00000022650 ENSANAG00000028980 ENSANAG00000028849 FAF1 (ENSANAG00000033702) #25 ENSANAG00000023034 ENSANAG00000037373 #27 CDKN2C (ENSANAG00000033643) #26 ENSANAG00000031477 ENSANAG00000037551 C1orf185 (ENSANAG00000033385) ENSANAG00000035696 TTC39A (ENSANAG00000035053) #29 EPS15 (ENSANAG00000022229) #30 OSBPL9 (ENSANAG00000027048) #31 Tarsier MODERN SPECIES 1032 ELAVL4 (ENSTSYG00000004130) #22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000161441 ENSGT00940000163504 #10 ENSGT00940000160927.e ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Lemuriformes ANCESTRAL SPECIES ENSGT00940000161441 ENSGT00940000163504 #10 ENSGT00940000160927.e ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296.qb.a #35 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Mouse lemur MODERN SPECIES 11 CYP4A11 (ENSMICG00000000965) #10 ENSMICG00000031270 CYP4B1 (ENSMICG00000000962) PDZK1IP1 (ENSMICG00000043731) #11 TAL1 (ENSMICG00000045732) #12 STIL (ENSMICG00000005402) #13 CMPK1 (ENSMICG00000005386) #14 FOXE3 (ENSMICG00000029422) FOXD2 (ENSMICG00000034204) TRABD2B (ENSMICG00000033266) #15 SLC5A9 (ENSMICG00000012426) #17 SPATA6 (ENSMICG00000003269) #19 BEND5 (ENSMICG00000003282) #21 ENSMICG00000037766 AGBL4 (ENSMICG00000003275) #20 ELAVL4 (ENSMICG00000003286) #22 DMRTA2 (ENSMICG00000044233) #24 FAF1 (ENSMICG00000003299) #25 CDKN2C (ENSMICG00000033935) #26 C1orf185 (ENSMICG00000004061) ENSMICG00000005503 ENSMICG00000047946 TTC39A (ENSMICG00000008377) #29 ENSMICG00000001200 #30 ENSMICG00000044074 ENSMICG00000002731 #31 ENSMICG00000029083 NRDC (ENSMICG00000002748) #32 RAB3B (ENSMICG00000036580) #33 TXNDC12 (ENSMICG00000042975) #34 ENSMICG00000002807 #35 Lemuriformes_a ANCESTRAL SPECIES 20 ENSGT00940000161441 ENSGT00940000163504 #10 ENSGT00940000160927.e ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296.qb.a #35 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Greater bamboo lemur MODERN SPECIES 669 AGBL4 (ENSPSMG00000002663) #20 BEND5 (ENSPSMG00000002676) #21 ELAVL4 (ENSPSMG00000002850) #22 DMRTA2 (ENSPSMG00000003033) #24 FAF1 (ENSPSMG00000003116) #25 CDKN2C (ENSPSMG00000003155) #26 C1orf185 (ENSPSMG00000003162) RNF11 (ENSPSMG00000003177) TTC39A (ENSPSMG00000003263) #29 EPS15 (ENSPSMG00000003371) #30 ENSPSMG00000003543 ENSPSMG00000003562 ENSPSMG00000003628 #31 Coquerels sifaka MODERN SPECIES 162 SLC5A9 (ENSPCOG00000004667) #17 SPATA6 (ENSPCOG00000008715) #19 BEND5 (ENSPCOG00000023490) #21 AGBL4 (ENSPCOG00000019895) #20 ELAVL4 (ENSPCOG00000024957) #22 DMRTA2 (ENSPCOG00000028074) #24 ENSPCOG00000028658 FAF1 (ENSPCOG00000025141) #25 CDKN2C (ENSPCOG00000019258) #26 ENSPCOG00000026759 C1orf185 (ENSPCOG00000025481) RNF11 (ENSPCOG00000015322) TTC39A (ENSPCOG00000018198) #29 ENSPCOG00000012900 #30 OSBPL9 (ENSPCOG00000027695) #31 NRDC (ENSPCOG00000024524) #32 RAB3B (ENSPCOG00000018696) #33 TXNDC12 (ENSPCOG00000022275) #34 ENSPCOG00000026062 #35 ZFYVE9 (ENSPCOG00000028070) Bushbaby MODERN SPECIES 274 SLC5A9 (ENSOGAG00000005008) #17 SPATA6 (ENSOGAG00000005014) #19 ENSOGAG00000004600 #20 BEND5 (ENSOGAG00000005779) #21 ENSOGAG00000026942 #20 ELAVL4 (ENSOGAG00000016990) #22 DMRTA2 (ENSOGAG00000026143) #24 ENSOGAG00000033138 FAF1 (ENSOGAG00000003624) #25 CDKN2C (ENSOGAG00000003625) #26 RNF11 (ENSOGAG00000011682) TTC39A (ENSOGAG00000011685) #29 EPS15 (ENSOGAG00000001077) #30 ENSOGAG00000026601 OSBPL9 (ENSOGAG00000003787) #31 ENSOGAG00000003792 #32 RAB3B (ENSOGAG00000003796) #33 TXNDC12 (ENSOGAG00000003798) #34 BTF3L4 (ENSOGAG00000030256) #35 ZFYVE9 (ENSOGAG00000015445) CC2D1B (ENSOGAG00000032430) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Glires ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Rodentia ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Rodentia_B ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Kangaroo rat MODERN SPECIES 352 ENSDORG00000024423 ENSDORG00000028283 ENSDORG00000008850 ENSDORG00000027207 Cyp4x1 (ENSDORG00000015306) Pdzk1ip1 (ENSDORG00000004566) #11 Tal1 (ENSDORG00000028266) #12 Stil (ENSDORG00000004571) #13 Cmpk1 (ENSDORG00000004576) #14 Foxd2 (ENSDORG00000028126) Trabd2b (ENSDORG00000023562) #15 Slc5a9 (ENSDORG00000010547) #17 Spata6 (ENSDORG00000010310) #19 Agbl4 (ENSDORG00000012728) #20 Bend5 (ENSDORG00000005815) #21 Elavl4 (ENSDORG00000012729) #22 Dmrta2 (ENSDORG00000015486) #24 Faf1 (ENSDORG00000015487) #25 ENSDORG00000023988 Fpgt (ENSDORG00000028813) Tnni3k (ENSDORG00000010710) ENSDORG00000010715 Cryz (ENSDORG00000002723) ENSDORG00000002718 Myomorpha ANCESTRAL SPECIES 3 ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Muroidea ANCESTRAL SPECIES 3 ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 Murinae ANCESTRAL SPECIES 2 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000165990.b ENSGT00940000165990.a ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 Mus ANCESTRAL SPECIES 3 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00520000058517 ENSGT00940000161273 #15 ENSGT00940000165990.b ENSGT00940000165990.a ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707.b ENSGT00940000164707.a ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 Mus_A ANCESTRAL SPECIES 3 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00520000058517 ENSGT00940000161273 #15 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707.b ENSGT00940000164707.a ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 Ryukyu mouse MODERN SPECIES 13 MGP_CAROLIEiJ_G0026305 #11 Tal1 (MGP_CAROLIEiJ_G0026304) #12 Stil (MGP_CAROLIEiJ_G0026303) #13 Cmpk1 (MGP_CAROLIEiJ_G0026302) #14 Foxe3 (MGP_CAROLIEiJ_G0026301) Foxd2 (MGP_CAROLIEiJ_G0026300) Trabd2b (MGP_CAROLIEiJ_G0026299) #15 Skint10 (MGP_CAROLIEiJ_G0026298) MGP_CAROLIEiJ_G0026297 #16 Skint1 (MGP_CAROLIEiJ_G0026296) #16 MGP_CAROLIEiJ_G0026294 Slc5a9 (MGP_CAROLIEiJ_G0026293) #17 Spata6 (MGP_CAROLIEiJ_G0026292) #19 Bend5 (MGP_CAROLIEiJ_G0026291) #21 Agbl4 (MGP_CAROLIEiJ_G0026290) #20 Elavl4 (MGP_CAROLIEiJ_G0026289) #22 Dmrta2 (MGP_CAROLIEiJ_G0026288) #24 Faf1 (MGP_CAROLIEiJ_G0026287) #25 Cdkn2c (MGP_CAROLIEiJ_G0026286) #26 4930522H14Rik (MGP_CAROLIEiJ_G0026285) Rnf11 (MGP_CAROLIEiJ_G0026284) Ttc39a (MGP_CAROLIEiJ_G0026283) #29 Eps15 (MGP_CAROLIEiJ_G0026282) #30 MGP_CAROLIEiJ_G0026281 Osbpl9 (MGP_CAROLIEiJ_G0026280) #31 Nrd1 (MGP_CAROLIEiJ_G0026279) #32 Rab3b (MGP_CAROLIEiJ_G0026278) #33 Kti12 (MGP_CAROLIEiJ_G0026277) MGP_CAROLIEiJ_G0026276 Txndc12 (MGP_CAROLIEiJ_G0026275) #34 MGP_CAROLIEiJ_G0026274 #35 Mus_B ANCESTRAL SPECIES 5 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00520000058517 ENSGT00940000161273 #15 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707.b ENSGT00940000164707.a ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 Mouse MODERN SPECIES 13 Skint11 (ENSMUSG00000057977) Skint5 (ENSMUSG00000078598) #16 Skint6 (ENSMUSG00000087194) #16 Skint10 (ENSMUSG00000048766) Skint2 (ENSMUSG00000034359) #16 Skint9 (ENSMUSG00000049972) Skint3 (ENSMUSG00000070868) #16 Skint4 (ENSMUSG00000055960) #16 Skint1 (ENSMUSG00000089773) #16 Skint7 (ENSMUSG00000049214) Skint8 (ENSMUSG00000078599) Slc5a9 (ENSMUSG00000028544) #17 Spata6 (ENSMUSG00000034401) #19 Bend5 (ENSMUSG00000028545) #21 Agbl4 (ENSMUSG00000061298) #20 Elavl4 (ENSMUSG00000028546) #22 Dmrta2 (ENSMUSG00000047143) #24 Faf1 (ENSMUSG00000010517) #25 Cdkn2c (ENSMUSG00000028551) #26 4930522H14Rik (ENSMUSG00000060491) Rnf11 (ENSMUSG00000028557) Ttc39a (ENSMUSG00000028555) #29 Eps15 (ENSMUSG00000028552) #30 Calr4 (ENSMUSG00000028558) Osbpl9 (ENSMUSG00000028559) #31 Nrd1 (ENSMUSG00000053510) #32 Rab3b (ENSMUSG00000003411) #33 Kti12 (ENSMUSG00000073775) Txndc12 (ENSMUSG00000028567) #34 Btf3l4 (ENSMUSG00000028568) #35 Zfyve9 (ENSMUSG00000034557) Mus_C ANCESTRAL SPECIES 2 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00520000058517 ENSGT00940000161273 #15 ENSGT00940000165990.b.a ENSGT00940000162562.A.a.a.b.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707.b ENSGT00940000164707.a ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 spretus MODERN SPECIES 13 Cmpk1 (MGP_SPRETEiJ_G0027274) #14 Foxe3 (MGP_SPRETEiJ_G0027273) Foxd2 (MGP_SPRETEiJ_G0027272) MGP_SPRETEiJ_G0027271 Trabd2b (MGP_SPRETEiJ_G0027270) #15 MGP_SPRETEiJ_G0027269 Skint10 (MGP_SPRETEiJ_G0027267) Skint2 (MGP_SPRETEiJ_G0027266) #16 Skint1 (MGP_SPRETEiJ_G0027265) #16 MGP_SPRETEiJ_G0027264 Skint7 (MGP_SPRETEiJ_G0027263) Slc5a9 (MGP_SPRETEiJ_G0027262) #17 Spata6 (MGP_SPRETEiJ_G0027261) #19 Bend5 (MGP_SPRETEiJ_G0027260) #21 Agbl4 (MGP_SPRETEiJ_G0027259) #20 Elavl4 (MGP_SPRETEiJ_G0027258) #22 Dmrta2 (MGP_SPRETEiJ_G0027257) #24 Faf1 (MGP_SPRETEiJ_G0027256) #25 Cdkn2c (MGP_SPRETEiJ_G0027255) #26 4930522H14Rik (MGP_SPRETEiJ_G0027254) Rnf11 (MGP_SPRETEiJ_G0027253) Ttc39a (MGP_SPRETEiJ_G0027252) #29 Eps15 (MGP_SPRETEiJ_G0027251) #30 Calr4 (MGP_SPRETEiJ_G0027250) Osbpl9 (MGP_SPRETEiJ_G0027249) #31 Nrd1 (MGP_SPRETEiJ_G0027248) #32 Rab3b (MGP_SPRETEiJ_G0027247) #33 Kti12 (MGP_SPRETEiJ_G0027246) MGP_SPRETEiJ_G0027245 Txndc12 (MGP_SPRETEiJ_G0027244) #34 MGP_SPRETEiJ_G0027243 #35 Steppe mouse MODERN SPECIES 3208 Elavl4 (ENSMSIG00000010996) #22 ENSMSIG00000010976 Dmrta2 (ENSMSIG00000010966) #24 Faf1 (ENSMSIG00000010918) #25 Cdkn2c (ENSMSIG00000010907) #26 ENSMSIG00000010900 4930522H14Rik (ENSMSIG00000010887) Rnf11 (ENSMSIG00000010854) Ttc39a (ENSMSIG00000010745) #29 Eps15 (ENSMSIG00000010254) #30 Calr4 (ENSMSIG00000010220) Osbpl9 (ENSMSIG00000010057) #31 Nrd1 (ENSMSIG00000009746) #32 ENSMSIG00000009731 Rab3b (ENSMSIG00000009714) #33 ENSMSIG00000009709 Shrew mouse MODERN SPECIES 19 Stil (MGP_PahariEiJ_G0028637) #13 Cmpk1 (MGP_PahariEiJ_G0028636) #14 Foxe3 (MGP_PahariEiJ_G0028635) Foxd2 (MGP_PahariEiJ_G0028634) MGP_PahariEiJ_G0028633 Trabd2b (MGP_PahariEiJ_G0028632) #15 MGP_PahariEiJ_G0028631 MGP_PahariEiJ_G0028630 #16 Skint1 (MGP_PahariEiJ_G0028629) #16 MGP_PahariEiJ_G0028628 MGP_PahariEiJ_G0028627 Slc5a9 (MGP_PahariEiJ_G0028626) #17 Spata6 (MGP_PahariEiJ_G0028625) #19 Bend5 (MGP_PahariEiJ_G0028624) #21 Agbl4 (MGP_PahariEiJ_G0028623) #20 Elavl4 (MGP_PahariEiJ_G0028622) #22 Dmrta2 (MGP_PahariEiJ_G0028621) #24 Faf1 (MGP_PahariEiJ_G0028620) #25 Cdkn2c (MGP_PahariEiJ_G0028619) #26 4930522H14Rik (MGP_PahariEiJ_G0028618) Rnf11 (MGP_PahariEiJ_G0028617) Ttc39a (MGP_PahariEiJ_G0028616) #29 Eps15 (MGP_PahariEiJ_G0028615) #30 Calr4 (MGP_PahariEiJ_G0028614) Osbpl9 (MGP_PahariEiJ_G0028613) #31 Nrd1 (MGP_PahariEiJ_G0028612) #32 Rab3b (MGP_PahariEiJ_G0028611) #33 Kti12 (MGP_PahariEiJ_G0028610) MGP_PahariEiJ_G0028609 Txndc12 (MGP_PahariEiJ_G0028608) #34 MGP_PahariEiJ_G0028607 #35 Rat MODERN SPECIES 15 Foxe3 (ENSRNOG00000007770) Foxd2 (ENSRNOG00000007759) Trabd2b (ENSRNOG00000029141) #15 Skint10 (ENSRNOG00000022988) LOC100911818 (ENSRNOG00000067091) ENSRNOG00000068199 ENSRNOG00000063781 ENSRNOG00000067562 #16 ENSRNOG00000063827 #16 Skint4 (ENSRNOG00000042047) #16 Skint1 (ENSRNOG00000043194) #16 Skint8 (ENSRNOG00000037680) Slc5a9 (ENSRNOG00000042950) #17 Spata6 (ENSRNOG00000007568) #19 Bend5 (ENSRNOG00000008025) #21 Elavl4 (ENSRNOG00000023601) #22 Dmrta2 (ENSRNOG00000068045) #24 Faf1 (ENSRNOG00000008523) #25 Cdkn2c (ENSRNOG00000008956) #26 LOC689589 (ENSRNOG00000009138) Rnf11 (ENSRNOG00000057589) Ttc39a (ENSRNOG00000047573) #29 Eps15 (ENSRNOG00000010299) #30 Calr4 (ENSRNOG00000037710) Osbpl9 (ENSRNOG00000033593) #31 Nrdc (ENSRNOG00000007111) #32 Rab3b (ENSRNOG00000008001) #33 Kti12 (ENSRNOG00000070073) Txndc12 (ENSRNOG00000008090) #34 Btf3l4 (ENSRNOG00000008512) #35 AABR07049554.2 (ENSRNOG00000049469) Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707.d ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Cricetinae ANCESTRAL SPECIES 5 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707.d ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00900000142372 ENSGT00940000154296 #35 ENSGT00950000183489 Golden Hamster MODERN SPECIES 648 Stil (ENSMAUG00000018720) #13 ENSMAUG00000019205 Foxe3 (ENSMAUG00000010093) Foxd2 (ENSMAUG00000010964) ENSMAUG00000009858 Trabd2b (ENSMAUG00000006510) #15 ENSMAUG00000013879 ##16 ENSMAUG00000004245 #16 ENSMAUG00000008748 #16 ENSMAUG00000020229 Slc5a9 (ENSMAUG00000016902) #17 ENSMAUG00000008507 #19 ENSMAUG00000021230 #19 Agbl4 (ENSMAUG00000020446) #20 Bend5 (ENSMAUG00000007838) #21 Elavl4 (ENSMAUG00000021566) #22 Dmrta2 (ENSMAUG00000012169) #24 Faf1 (ENSMAUG00000011844) #25 Cdkn2c (ENSMAUG00000019466) #26 4930522H14Rik (ENSMAUG00000018143) Rnf11 (ENSMAUG00000014680) Ttc39a (ENSMAUG00000013412) #29 Eps15 (ENSMAUG00000021661) #30 Calr4 (ENSMAUG00000016786) Osbpl9 (ENSMAUG00000011321) #31 Nrd1 (ENSMAUG00000012215) #32 ENSMAUG00000010138 Rab3b (ENSMAUG00000012473) #33 Txndc12 (ENSMAUG00000008444) #34 ENSMAUG00000007753 ENSMAUG00000010455 #35 Chinese hamster chok1gshd MODERN SPECIES 111 Tal1 (ENSCGRG00001023671) #12 Stil (ENSCGRG00001012804) #13 Cmpk1 (ENSCGRG00001016283) #14 Foxe3 (ENSCGRG00001005301) Foxd2 (ENSCGRG00001010484) ENSCGRG00001022727 Trabd2b (ENSCGRG00001016130) #15 ENSCGRG00001018354 ##16 ENSCGRG00001021187 #16 ENSCGRG00001021660 #16 ENSCGRG00001023213 Slc5a9 (ENSCGRG00001019511) #17 Spata6 (ENSCGRG00001001168) #19 Agbl4 (ENSCGRG00001017075) #20 Bend5 (ENSCGRG00001018629) #21 Elavl4 (ENSCGRG00001020348) #22 Dmrta2 (ENSCGRG00001010624) #24 Faf1 (ENSCGRG00001012451) #25 Cdkn2c (ENSCGRG00001013915) #26 4930522H14Rik (ENSCGRG00001016306) Rnf11 (ENSCGRG00001018595) Ttc39a (ENSCGRG00001020495) #29 Eps15 (ENSCGRG00001009890) #30 Calr4 (ENSCGRG00001011514) Osbpl9 (ENSCGRG00001021068) #31 Nrd1 (ENSCGRG00001022296) #32 Rab3b (ENSCGRG00001013853) #33 Txndc12 (ENSCGRG00001019312) #34 ENSCGRG00001021460 #35 ENSCGRG00001021792 Zfyve9 (ENSCGRG00001023802) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000165990 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.A.a.b #16 ENSGT00940000164707.d ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00960000191437 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Prairie vole MODERN SPECIES 1 Pdzk1ip1 (ENSMOCG00000021926) #11 Tal1 (ENSMOCG00000015608) #12 Stil (ENSMOCG00000001995) #13 Cmpk1 (ENSMOCG00000019310) #14 Foxe3 (ENSMOCG00000008738) Foxd2 (ENSMOCG00000002875) Trabd2b (ENSMOCG00000002510) #15 ENSMOCG00000012467 ENSMOCG00000013586 #16 ENSMOCG00000003588 #16 ENSMOCG00000019561 Slc5a9 (ENSMOCG00000022328) #17 ENSMOCG00000021709 #19 Bend5 (ENSMOCG00000003340) #21 Agbl4 (ENSMOCG00000016733) #20 Elavl4 (ENSMOCG00000010309) #22 Dmrta2 (ENSMOCG00000018451) #24 Faf1 (ENSMOCG00000016469) #25 Cdkn2c (ENSMOCG00000008425) #26 4930522H14Rik (ENSMOCG00000014783) Rnf11 (ENSMOCG00000014218) Ttc39a (ENSMOCG00000009418) #29 Eps15 (ENSMOCG00000004099) #30 Calr4 (ENSMOCG00000002656) ENSMOCG00000017309 Osbpl9 (ENSMOCG00000017056) #31 Nrd1 (ENSMOCG00000008359) #32 Rab3b (ENSMOCG00000013133) #33 ENSMOCG00000008572 Txndc12 (ENSMOCG00000007402) #34 ENSMOCG00000012648 #35 Northern American deer mouse MODERN SPECIES 11 Stil (ENSPEMG00000023881) #13 Cmpk1 (ENSPEMG00000021852) #14 Foxe3 (ENSPEMG00000025577) Trabd2b (ENSPEMG00000021574) #15 ENSPEMG00000008143 ENSPEMG00000023162 #16 ENSPEMG00000026129 ENSPEMG00000030740 #16 ENSPEMG00000021558 #16 Skint1 (ENSPEMG00000011155) #16 ENSPEMG00000021177 Slc5a9 (ENSPEMG00000021770) #17 Spata6 (ENSPEMG00000022120) #19 Bend5 (ENSPEMG00000022292) #21 Agbl4 (ENSPEMG00000023297) #20 Elavl4 (ENSPEMG00000021058) #22 Dmrta2 (ENSPEMG00000028558) #24 Faf1 (ENSPEMG00000022043) #25 Cdkn2c (ENSPEMG00000029349) #26 ENSPEMG00000030255 4930522H14Rik (ENSPEMG00000020496) Rnf11 (ENSPEMG00000028550) Ttc39a (ENSPEMG00000021737) #29 ENSPEMG00000029734 Eps15 (ENSPEMG00000017501) #30 Calr4 (ENSPEMG00000015759) Osbpl9 (ENSPEMG00000023026) #31 Nrd1 (ENSPEMG00000021266) #32 Rab3b (ENSPEMG00000009732) #33 ENSPEMG00000029069 Txndc12 (ENSPEMG00000027936) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 780 ENSNGAG00000006899 #19 ENSNGAG00000011566 #20 Bend5 (ENSNGAG00000016052) #21 ENSNGAG00000020205 #20 Elavl4 (ENSNGAG00000023123) #22 Dmrta2 (ENSNGAG00000010314) #24 Faf1 (ENSNGAG00000015466) #25 ENSNGAG00000023426 Cdkn2c (ENSNGAG00000001881) #26 Lesser Egyptian jerboa MODERN SPECIES 98 Cyp4x1 (ENSJJAG00000009131) Pdzk1ip1 (ENSJJAG00000013927) #11 ENSJJAG00000013211 Foxd2 (ENSJJAG00000014328) Spata6 (ENSJJAG00000010848) #19 ENSJJAG00000009281 #20 Bend5 (ENSJJAG00000007543) #21 ENSJJAG00000004932 #20 Elavl4 (ENSJJAG00000023099) #22 ENSJJAG00000014086 Dmrta2 (ENSJJAG00000021824) #24 Faf1 (ENSJJAG00000021352) #25 Cdkn2c (ENSJJAG00000020524) #26 Alg10b (ENSJJAG00000019582) Syt10 (ENSJJAG00000019374) Pkp2 (ENSJJAG00000014586) Yars2 (ENSJJAG00000000641) Dnm1l (ENSJJAG00000023169) ENSJJAG00000013851 Fgd4 (ENSJJAG00000018423) Gng12 (ENSJJAG00000017730) Gadd45a (ENSJJAG00000016764) ENSJJAG00000016243 ENSJJAG00000016153 Rodentia_A ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.nb #31 ENSGT00940000154690.mb.b #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00390000011196 #9 ENSGT00940000161441 ENSGT00940000163570.a ENSGT00940000155173.f.a ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00940000163721 #28 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.nb #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000001377 STIL (ENSHGLG00000001713) #13 ENSHGLG00000001416 FOXE3 (ENSHGLG00000034395) ENSHGLG00000049793 ENSHGLG00000020805 ENSHGLG00000010693 #15 ENSHGLG00000037697 SLC5A9 (ENSHGLG00000003161) #17 ENSHGLG00000002670 SPATA6 (ENSHGLG00000014205) #19 ENSHGLG00000011360 #21 ENSHGLG00000034647 #21 ENSHGLG00000039566 ENSHGLG00000043536 ELAVL4 (ENSHGLG00000000485) #22 ENSHGLG00000037718 DMRTA2 (ENSHGLG00000001509) #24 CDKN2C (ENSHGLG00000034852) #26 FAF1 (ENSHGLG00000000538) #25 ENSHGLG00000034536 ENSHGLG00000001310 #29 ENSHGLG00000000349 #30 ENSHGLG00000003489 ENSHGLG00000002972 ENSHGLG00000001285 #31 ENSHGLG00000032380 ENSHGLG00000002902 #32 ENSHGLG00000044000 ENSHGLG00000031974 #33 ENSHGLG00000000345 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00390000011196 #9 ENSGT00940000161441 ENSGT00940000163570.a ENSGT00940000155173.f.a ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00940000163721 #28 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.nb #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Hystricomorpha_b ANCESTRAL SPECIES 54 ENSGT00390000016446 #8 ENSGT00390000011196 #9 ENSGT00940000161441 ENSGT00940000163570.a ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589.k #14 ENSGT00940000163540 ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00940000163721 #28 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.nb #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Degu MODERN SPECIES 148 PDZK1IP1 (ENSODEG00000008906) #11 TAL1 (ENSODEG00000006602) #12 STIL (ENSODEG00000007478) #13 ENSODEG00000007423 #14 ENSODEG00000006760 ENSODEG00000019646 ENSODEG00000008585 TRABD2B (ENSODEG00000007567) #15 SLC5A9 (ENSODEG00000007740) #17 SPATA6 (ENSODEG00000006382) #19 BEND5 (ENSODEG00000007742) #21 ENSODEG00000006988 ENSODEG00000019354 AGBL4 (ENSODEG00000009564) #20 ENSODEG00000007109 ELAVL4 (ENSODEG00000006770) #22 DMRTA2 (ENSODEG00000006537) #24 FAF1 (ENSODEG00000010743) #25 CDKN2C (ENSODEG00000010220) #26 ENSODEG00000007244 ENSODEG00000006863 ENSODEG00000009865 ENSODEG00000009489 TTC39A (ENSODEG00000006441) #29 EPS15 (ENSODEG00000006324) #30 ENSODEG00000007342 OSBPL9 (ENSODEG00000005945) #31 NRDC (ENSODEG00000007264) #32 RAB3B (ENSODEG00000008282) #33 ENSODEG00000006614 ENSODEG00000006041 #34 Long-tailed chinchilla MODERN SPECIES 171 TEX38 (ENSCLAG00000006425) #8 EFCAB14 (ENSCLAG00000005792) #9 ENSCLAG00000005609 ENSCLAG00000005036 ENSCLAG00000004484 CYP4B1 (ENSCLAG00000007349) PDZK1IP1 (ENSCLAG00000007015) #11 TAL1 (ENSCLAG00000006842) #12 STIL (ENSCLAG00000006217) #13 ENSCLAG00000005985 TRABD2B (ENSCLAG00000005900) #15 SLC5A9 (ENSCLAG00000007839) #17 SPATA6 (ENSCLAG00000007504) #19 BEND5 (ENSCLAG00000007168) #21 AGBL4 (ENSCLAG00000006735) #20 ELAVL4 (ENSCLAG00000005476) #22 DMRTA2 (ENSCLAG00000008314) #24 FAF1 (ENSCLAG00000008153) #25 CDKN2C (ENSCLAG00000007763) #26 C1orf185 (ENSCLAG00000007634) ENSCLAG00000006939 #28 TTC39A (ENSCLAG00000005328) #29 EPS15 (ENSCLAG00000005042) #30 ENSCLAG00000004460 ENSCLAG00000009812 OSBPL9 (ENSCLAG00000006250) #31 NRDC (ENSCLAG00000004925) #32 RAB3B (ENSCLAG00000004516) #33 ENSCLAG00000004470 TXNDC12 (ENSCLAG00000004403) #34 BTF3L4 (ENSCLAG00000007659) #35 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 112 ENSCPOG00000013870 #19 AGBL4 (ENSCPOG00000013872) #20 BEND5 (ENSCPOG00000013879) #21 ENSCPOG00000002044 #22 ENSCPOG00000030212 FAF1 (ENSCPOG00000001151) #25 CDKN2C (ENSCPOG00000031293) #26 RNF11 (ENSCPOG00000031987) TTC39A (ENSCPOG00000008138) #29 EPS15 (ENSCPOG00000009273) #30 ENSCPOG00000023884 OSBPL9 (ENSCPOG00000010663) #31 NRDC (ENSCPOG00000010677) #32 RAB3B (ENSCPOG00000007714) #33 TXNDC12 (ENSCPOG00000038607) #34 ENSCPOG00000031935 BTF3L4 (ENSCPOG00000036248) #35 ENSCPOG00000033698 ZFYVE9 (ENSCPOG00000005063) Guinea pig MODERN SPECIES 64 CHCHD7 (ENSCPOG00000030280) PLAG1 (ENSCPOG00000039131) MOS (ENSCPOG00000020476) ENSCPOG00000011697 ENSCPOG00000030320 LYN (ENSCPOG00000011693) TGS1 (ENSCPOG00000009713) TMEM68 (ENSCPOG00000019826) XKR4 (ENSCPOG00000003676) ENSCPOG00000039324 SOX17 (ENSCPOG00000000892) MRPL15 (ENSCPOG00000035946) LYPLA1 (ENSCPOG00000022715) TCEA1 (ENSCPOG00000005886) ENSCPOG00000038533 ENSCPOG00000022816 #22 ATP6V1H (ENSCPOG00000012174) ENSCPOG00000023180 OPRK1 (ENSCPOG00000006607) NPBWR1 (ENSCPOG00000019602) RB1CC1 (ENSCPOG00000020341) ENSCPOG00000034718 ENSCPOG00000032897 ST18 (ENSCPOG00000005486) PCMTD1 (ENSCPOG00000038704) SNTG1 (ENSCPOG00000010462) ENSCPOG00000033449 CLXN (ENSCPOG00000003325) UBE2V2 (ENSCPOG00000039321) MCM4 (ENSCPOG00000003682) PRKDC (ENSCPOG00000013944) Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A.c #16 ENSGT00940000162562.A.d #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988.f ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.mb.b #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Marmotini ANCESTRAL SPECIES ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A.c #16 ENSGT00940000164707.e.b ENSGT00940000162562.A.d #16 ENSGT00940000164707.e.a ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988.f ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.mb.b #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Alpin marmot MODERN SPECIES 15 PDZK1IP1 (ENSMMMG00000018092) #11 ENSMMMG00000018085 #12 STIL (ENSMMMG00000018013) #13 CMPK1 (ENSMMMG00000017986) #14 FOXD2 (ENSMMMG00000017982) TRABD2B (ENSMMMG00000017951) #15 ENSMMMG00000017939 ##16 ENSMMMG00000017918 #16 ENSMMMG00000017906 ENSMMMG00000017897 #16 ENSMMMG00000017885 SLC5A9 (ENSMMMG00000017850) #17 ENSMMMG00000017834 #19 BEND5 (ENSMMMG00000017823) #21 AGBL4 (ENSMMMG00000017802) #20 ELAVL4 (ENSMMMG00000017637) #22 ENSMMMG00000017613 FAF1 (ENSMMMG00000017599) #25 CDKN2C (ENSMMMG00000017571) #26 ENSMMMG00000017564 C1orf185 (ENSMMMG00000017543) RNF11 (ENSMMMG00000017539) TTC39A (ENSMMMG00000017526) #29 EPS15 (ENSMMMG00000017432) #30 ENSMMMG00000017404 ENSMMMG00000017393 ENSMMMG00000016694 #31 NRDC (ENSMMMG00000016570) #32 RAB3B (ENSMMMG00000016565) #33 TXNDC12 (ENSMMMG00000016554) #34 BTF3L4 (ENSMMMG00000016539) #35 Marmotini_b ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A.c #16 ENSGT00940000162562.A.d #16 ENSGT00940000164707.e.a ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988.f ENSGT00950000182917.a.b.a #29 ENSGT00940000155751.m #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690.mb.b #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Arctic ground squirrel MODERN SPECIES 21 ENSUPAG00010022468 #19 BEND5 (ENSUPAG00010022467) #21 ENSUPAG00010022466 ENSUPAG00010022464 AGBL4 (ENSUPAG00010022463) #20 ELAVL4 (ENSUPAG00010022399) #22 DMRTA2 (ENSUPAG00010022391) #24 FAF1 (ENSUPAG00010022385) #25 CDKN2C (ENSUPAG00010022383) #26 C1orf185 (ENSUPAG00010022379) RNF11 (ENSUPAG00010022375) TTC39A (ENSUPAG00010022367) #29 EPS15 (ENSUPAG00010022360) #30 ENSUPAG00010022352 ENSUPAG00010021819 #31 NRDC (ENSUPAG00010021802) #32 RAB3B (ENSUPAG00010021800) #33 TXNDC12 (ENSUPAG00010021798) #34 BTF3L4 (ENSUPAG00010021796) #35 ENSUPAG00010021795 ZFYVE9 (ENSUPAG00010021759) Squirrel MODERN SPECIES 122 ELAVL4 (ENSSTOG00000027271) #22 DMRTA2 (ENSSTOG00000024624) #24 FAF1 (ENSSTOG00000002849) #25 CDKN2C (ENSSTOG00000013796) #26 C1orf185 (ENSSTOG00000028403) ENSSTOG00000020072 TTC39A (ENSSTOG00000009015) #29 ENSSTOG00000023598 #30 ENSSTOG00000022882 ENSSTOG00000000692 #31 NRDC (ENSSTOG00000000706) #32 RAB3B (ENSSTOG00000016470) #33 ENSSTOG00000032439 TXNDC12 (ENSSTOG00000006093) #34 BTF3L4 (ENSSTOG00000006129) #35 ENSSTOG00000025134 Eurasian red squirrel MODERN SPECIES CYP4X1 (ENSSVLG00005010957) PDZK1IP1 (ENSSVLG00005011099) #11 TAL1 (ENSSVLG00005011145) #12 STIL (ENSSVLG00005011246) #13 ENSSVLG00005012034 #14 FOXE3 (ENSSVLG00005012158) FOXD2 (ENSSVLG00005012190) TRABD2B (ENSSVLG00005012216) #15 ENSSVLG00005012317 ##16 ENSSVLG00005012369 #16 ENSSVLG00005012469 SLC5A9 (ENSSVLG00005012665) #17 SPATA6 (ENSSVLG00005013178) #19 AGBL4 (ENSSVLG00005013331) #20 BEND5 (ENSSVLG00005013425) #21 ELAVL4 (ENSSVLG00005014154) #22 DMRTA2 (ENSSVLG00005014792) #24 FAF1 (ENSSVLG00005014843) #25 CDKN2C (ENSSVLG00005014944) #26 C1orf185 (ENSSVLG00005015015) ENSSVLG00005015219 ENSSVLG00005015243 TTC39A (ENSSVLG00005015332) #29 EPS15 (ENSSVLG00005015885) #30 ENSSVLG00005016035 ENSSVLG00005016060 OSBPL9 (ENSSVLG00005016219) #31 ENSSVLG00005016989 NRDC (ENSSVLG00005017058) #32 RAB3B (ENSSVLG00005017555) #33 TXNDC12 (ENSSVLG00005017615) #34 Lagomorpha ANCESTRAL SPECIES 8 ENSGT00390000016446 #8 ENSGT00390000011196 #9 ENSGT00940000161441 ENSGT00940000155173 ENSGT00940000160927 ENSGT00980000201734 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000155042.a.b ##20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Rabbit MODERN SPECIES 4 TRABD2B (ENSOCUG00000035774) #15 ENSOCUG00000031714 SLC5A9 (ENSOCUG00000007119) #17 ENSOCUG00000021113 SPATA6 (ENSOCUG00000008704) #19 ENSOCUG00000006460 #20 BEND5 (ENSOCUG00000006471) #21 ENSOCUG00000033406 ##20 ENSOCUG00000011146 ENSOCUG00000023561 ENSOCUG00000035051 ENSOCUG00000031084 ENSOCUG00000029778 ENSOCUG00000030354 ENSOCUG00000037999 ELAVL4 (ENSOCUG00000016262) #22 DMRTA2 (ENSOCUG00000001019) #24 FAF1 (ENSOCUG00000031945) #25 CDKN2C (ENSOCUG00000008385) #26 ENSOCUG00000038347 C1orf185 (ENSOCUG00000027363) RNF11 (ENSOCUG00000007582) TTC39A (ENSOCUG00000007583) #29 EPS15 (ENSOCUG00000004293) #30 ENSOCUG00000023504 OSBPL9 (ENSOCUG00000004303) #31 NRDC (ENSOCUG00000004330) #32 RAB3B (ENSOCUG00000001969) #33 ENSOCUG00000033633 TXNDC12 (ENSOCUG00000001972) #34 ENSOCUG00000001517 #35 Pika MODERN SPECIES 2665 ELAVL4 (ENSOPRG00000015300) #22 Tree shrew MODERN SPECIES 1418 SPATA6 (ENSTBEG00000011254) #19 AGBL4 (ENSTBEG00000011525) #20 ELAVL4 (ENSTBEG00000011730) #22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000157399 #22 Common shrew MODERN SPECIES 11422 ELAVL4 (ENSSARG00000010733) #22 Hedgehog MODERN SPECIES 15759 ELAVL4 (ENSEEUG00000008766) #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Suina ANCESTRAL SPECIES 27 ENSGT00940000155173.g.b ENSGT00940000154660.b.d.b #11 ENSGT00940000155173.g.a ENSGT00940000160927 ENSGT00940000154660.b.c #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Pig MODERN SPECIES 14 ENSSSCG00000031778 ENSSSCG00000056639 ENSSSCG00000020872 #11 TAL1 (ENSSSCG00000058056) #12 STIL (ENSSSCG00000003888) #13 CMPK1 (ENSSSCG00000003885) #14 FOXE3 (ENSSSCG00000003884) FOXD2 (ENSSSCG00000034880) TRABD2B (ENSSSCG00000037318) #15 SLC5A9 (ENSSSCG00000003882) #17 SPATA6 (ENSSSCG00000003881) #19 ENSSSCG00000031300 #20 BEND5 (ENSSSCG00000063412) #21 ENSSSCG00000049367 ENSSSCG00000052381 ELAVL4 (ENSSSCG00000037291) #22 DMRTA2 (ENSSSCG00000030552) #24 ENSSSCG00000049732 FAF1 (ENSSSCG00000003877) #25 CDKN2C (ENSSSCG00000003876) #26 C1orf185 (ENSSSCG00000031188) RNF11 (ENSSSCG00000031172) TTC39A (ENSSSCG00000003875) #29 ENSSSCG00000055459 EPS15 (ENSSSCG00000003872) #30 ENSSSCG00000059473 OSBPL9 (ENSSSCG00000021292) #31 ENSSSCG00000058239 NRDC (ENSSSCG00000003870) #32 RAB3B (ENSSSCG00000021036) #33 KTI12 (ENSSSCG00000046753) Chacoan peccary MODERN SPECIES 54 ENSCWAG00000007884 ENSCWAG00000007782 ENSCWAG00000007685 ENSCWAG00000007625 ENSCWAG00000007601 #11 TAL1 (ENSCWAG00000007586) #12 STIL (ENSCWAG00000007144) #13 CMPK1 (ENSCWAG00000007073) #14 FOXE3 (ENSCWAG00000007053) FOXD2 (ENSCWAG00000007046) TRABD2B (ENSCWAG00000007013) #15 SLC5A9 (ENSCWAG00000006856) #17 SPATA6 (ENSCWAG00000006748) #19 BEND5 (ENSCWAG00000006694) #21 AGBL4 (ENSCWAG00000006528) #20 ELAVL4 (ENSCWAG00000005560) #22 DMRTA2 (ENSCWAG00000005466) #24 FAF1 (ENSCWAG00000005411) #25 CDKN2C (ENSCWAG00000005386) #26 C1orf185 (ENSCWAG00000005324) RNF11 (ENSCWAG00000005303) TTC39A (ENSCWAG00000004869) #29 EPS15 (ENSCWAG00000004768) #30 ENSCWAG00000004705 OSBPL9 (ENSCWAG00000004180) #31 NRDC (ENSCWAG00000003843) #32 RAB3B (ENSCWAG00000003795) #33 ENSCWAG00000003778 TXNDC12 (ENSCWAG00000003757) #34 BTF3L4 (ENSCWAG00000003727) #35 ZFYVE9 (ENSCWAG00000003673) Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000153288.b ENSGT00390000002443 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Cetacea ANCESTRAL SPECIES ENSGT00950000182958.a.b.b.j.l ENSGT00940000155173.i.a ENSGT00940000160927 ENSGT00940000155173.j ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000166653 Odontoceti ANCESTRAL SPECIES ENSGT00940000155173.j ENSGT00940000160927 ENSGT00940000155173.i.a ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000155339.r ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000166653 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000160927 ENSGT00940000155173.i.a ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000153412.A.a.c.e.b ENSGT00940000161273 #15 ENSGT00940000155339.r ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000158435.j Dolphin MODERN SPECIES 2874 ENSTTRG00000012352 #16 SLC5A9 (ENSTTRG00000012358) #17 SPATA6 (ENSTTRG00000012366) #19 AGBL4 (ENSTTRG00000012384) #20 BEND5 (ENSTTRG00000012397) #21 ELAVL4 (ENSTTRG00000012441) #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000161441.c.b.a ENSGT00940000163504 #10 ENSGT00940000155173.i.a ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000155339.r ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000158435.j Monodontidae ANCESTRAL SPECIES ENSGT00940000161441.c.b.a ENSGT00940000163504 #10 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000153412.A.a.c.e.b ENSGT00940000161273 #15 ENSGT00940000155339.r ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Narwhal MODERN SPECIES 304 ENSMMNG00015017646 #10 PDZK1IP1 (ENSMMNG00015017600) #11 TAL1 (ENSMMNG00015017573) #12 STIL (ENSMMNG00015017497) #13 CMPK1 (ENSMMNG00015017341) #14 FOXE3 (ENSMMNG00015017301) FOXD2 (ENSMMNG00015017290) ENSMMNG00015017274 TRABD2B (ENSMMNG00015017248) #15 ENSMMNG00015017223 SLC5A9 (ENSMMNG00015017189) #17 SPATA6 (ENSMMNG00015017114) #19 BEND5 (ENSMMNG00015017067) #21 ENSMMNG00015017042 AGBL4 (ENSMMNG00015016854) #20 ELAVL4 (ENSMMNG00015016468) #22 DMRTA2 (ENSMMNG00015016305) #24 FAF1 (ENSMMNG00015016261) #25 CDKN2C (ENSMMNG00015016226) #26 ENSMMNG00015016200 RNF11 (ENSMMNG00015016177) TTC39A (ENSMMNG00015015942) #29 EPS15 (ENSMMNG00015015790) #30 ENSMMNG00015015722 OSBPL9 (ENSMMNG00015015491) #31 NRDC (ENSMMNG00015015338) #32 ENSMMNG00015015285 RAB3B (ENSMMNG00015015267) #33 ENSMMNG00015015254 TXNDC12 (ENSMMNG00015015235) #34 BTF3L4 (ENSMMNG00015015217) #35 Beluga whale MODERN SPECIES 74 TAL1 (ENSDLEG00000014787) #12 STIL (ENSDLEG00000014810) #13 CMPK1 (ENSDLEG00000014989) #14 FOXE3 (ENSDLEG00000015041) FOXD2 (ENSDLEG00000015047) ENSDLEG00000015052 TRABD2B (ENSDLEG00000015057) #15 ENSDLEG00000015069 ENSDLEG00000015073 SLC5A9 (ENSDLEG00000015091) #17 SPATA6 (ENSDLEG00000015119) #19 AGBL4 (ENSDLEG00000015168) #20 BEND5 (ENSDLEG00000015199) #21 ENSDLEG00000015227 ENSDLEG00000015238 #20 ELAVL4 (ENSDLEG00000015258) #22 DMRTA2 (ENSDLEG00000016008) #24 FAF1 (ENSDLEG00000016028) #25 CDKN2C (ENSDLEG00000016125) #26 C1orf185 (ENSDLEG00000016132) RNF11 (ENSDLEG00000016174) TTC39A (ENSDLEG00000016187) #29 EPS15 (ENSDLEG00000016250) #30 ENSDLEG00000016334 OSBPL9 (ENSDLEG00000016465) #31 NRDC (ENSDLEG00000017921) #32 ENSDLEG00000018017 RAB3B (ENSDLEG00000018039) #33 TXNDC12 (ENSDLEG00000018054) #34 ENSDLEG00000018063 BTF3L4 (ENSDLEG00000018068) #35 Vaquita MODERN SPECIES ENSPSNG00000008499 PDZK1IP1 (ENSPSNG00000008584) #11 TAL1 (ENSPSNG00000008617) #12 STIL (ENSPSNG00000008673) #13 CMPK1 (ENSPSNG00000008760) #14 FOXE3 (ENSPSNG00000008840) FOXD2 (ENSPSNG00000008853) TRABD2B (ENSPSNG00000008890) #15 ENSPSNG00000008955 ENSPSNG00000008987 SLC5A9 (ENSPSNG00000009041) #17 SPATA6 (ENSPSNG00000009229) #19 AGBL4 (ENSPSNG00000009355) #20 BEND5 (ENSPSNG00000009518) #21 ENSPSNG00000009540 ELAVL4 (ENSPSNG00000009710) #22 DMRTA2 (ENSPSNG00000010437) #24 FAF1 (ENSPSNG00000010473) #25 CDKN2C (ENSPSNG00000010560) #26 ENSPSNG00000010600 C1orf185 (ENSPSNG00000010619) RNF11 (ENSPSNG00000010799) TTC39A (ENSPSNG00000010892) #29 EPS15 (ENSPSNG00000011562) #30 ENSPSNG00000011761 #31 NRDC (ENSPSNG00000012358) #32 ENSPSNG00000012757 RAB3B (ENSPSNG00000012890) #33 TXNDC12 (ENSPSNG00000012967) #34 ENSPSNG00000013037 BTF3L4 (ENSPSNG00000013083) #35 Sperm whale MODERN SPECIES 15 ENSPCTG00005009447 BTF3L4 (ENSPCTG00005009786) #35 TXNDC12 (ENSPCTG00005009903) #34 ENSPCTG00005010014 RAB3B (ENSPCTG00005010036) #33 NRDC (ENSPCTG00005010107) #32 OSBPL9 (ENSPCTG00005010621) #31 ENSPCTG00005011404 EPS15 (ENSPCTG00005011544) #30 TTC39A (ENSPCTG00005011838) #29 RNF11 (ENSPCTG00005012191) ENSPCTG00005012230 CDKN2C (ENSPCTG00005012278) #26 FAF1 (ENSPCTG00005012310) #25 ENSPCTG00005012390 #20 ELAVL4 (ENSPCTG00005012489) #22 ENSPCTG00005013384 ENSPCTG00005013401 BEND5 (ENSPCTG00005013421) #21 AGBL4 (ENSPCTG00005013528) #20 SPATA6 (ENSPCTG00005013649) #19 SLC5A9 (ENSPCTG00005013780) #17 ENSPCTG00005014378 ENSPCTG00005014432 FOXE3 (ENSPCTG00005014461) CMPK1 (ENSPCTG00005014484) #14 STIL (ENSPCTG00005014632) #13 TAL1 (ENSPCTG00005014754) #12 PDZK1IP1 (ENSPCTG00005014810) #11 ENSPCTG00005014892 ENSPCTG00005015607 Blue whale MODERN SPECIES ENSBMSG00010005002 ENSBMSG00010005028 ENSBMSG00010005054 PDZK1IP1 (ENSBMSG00010005121) #11 TAL1 (ENSBMSG00010005132) #12 STIL (ENSBMSG00010005150) #13 CMPK1 (ENSBMSG00010005177) #14 FOXE3 (ENSBMSG00010005194) ENSBMSG00010005215 TRABD2B (ENSBMSG00010005224) #15 SLC5A9 (ENSBMSG00010005258) #17 SPATA6 (ENSBMSG00010005335) #19 AGBL4 (ENSBMSG00010005358) #20 BEND5 (ENSBMSG00010005413) #21 ENSBMSG00010005423 ELAVL4 (ENSBMSG00010005482) #22 DMRTA2 (ENSBMSG00010005622) #24 FAF1 (ENSBMSG00010005636) #25 CDKN2C (ENSBMSG00010005658) #26 C1orf185 (ENSBMSG00010005668) RNF11 (ENSBMSG00010005680) TTC39A (ENSBMSG00010005702) #29 EPS15 (ENSBMSG00010005767) #30 ENSBMSG00010005842 #31 NRDC (ENSBMSG00010005952) #32 RAB3B (ENSBMSG00010005996) #33 TXNDC12 (ENSBMSG00010006006) #34 ENSBMSG00010006017 ENSBMSG00010006025 ENSBMSG00010006038 ZFYVE9 (ENSBMSG00010006063) Pecora ANCESTRAL SPECIES 2 ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Percora_a ANCESTRAL SPECIES 1 ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Bovidae ANCESTRAL SPECIES 1 ENSGT00940000155173.k.b ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Caprinae ANCESTRAL SPECIES 2 ENSGT00940000155173.k.a.a.b.a.d ENSGT00940000155173.k.b ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Goat MODERN SPECIES 22 CYP4A42 (ENSCHIG00000025289) CYP4X1 (ENSCHIG00000017002) PDZK1IP1 (ENSCHIG00000010100) #11 TAL1 (ENSCHIG00000023704) #12 STIL (ENSCHIG00000018306) #13 CMPK1 (ENSCHIG00000009857) #14 FOXE3 (ENSCHIG00000005171) FOXD2 (ENSCHIG00000000964) ENSCHIG00000008212 TRABD2B (ENSCHIG00000016346) #15 ENSCHIG00000016345 #16 SLC5A9 (ENSCHIG00000008499) #17 SPATA6 (ENSCHIG00000022098) #19 ENSCHIG00000002488 #20 BEND5 (ENSCHIG00000021731) #21 ELAVL4 (ENSCHIG00000002038) #22 DMRTA2 (ENSCHIG00000014219) #24 FAF1 (ENSCHIG00000023469) #25 CDKN2C (ENSCHIG00000018497) #26 C1orf185 (ENSCHIG00000024707) RNF11 (ENSCHIG00000015466) TTC39A (ENSCHIG00000004432) #29 EPS15 (ENSCHIG00000014467) #30 ENSCHIG00000011084 ENSCHIG00000026722 #31 NRDC (ENSCHIG00000018703) #32 ENSCHIG00000015938 RAB3B (ENSCHIG00000018985) #33 TXNDC12 (ENSCHIG00000021386) #34 ENSCHIG00000000766 #35 ZFYVE9 (ENSCHIG00000027153) Bovinae ANCESTRAL SPECIES 1 ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831.q.a #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00960000192687 ENSGT00940000154690.q #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a American bison MODERN SPECIES 2971 CYP4X1 (ENSBBBG00000008137) ENSBBBG00000009802 PDZK1IP1 (ENSBBBG00000009801) #11 ENSBBBG00000001633 #12 STIL (ENSBBBG00000001632) #13 CMPK1 (ENSBBBG00000009782) #14 TRABD2B (ENSBBBG00000009775) #15 ENSBBBG00000009768 ##16 ENSBBBG00000009765 ENSBBBG00000009039 #16 SLC5A9 (ENSBBBG00000009762) #17 SPATA6 (ENSBBBG00000009751) #19 AGBL4 (ENSBBBG00000009737) #20 BEND5 (ENSBBBG00000009734) #21 ENSBBBG00000001599 ELAVL4 (ENSBBBG00000009727) #22 FAF1 (ENSBBBG00000009713) #25 CDKN2C (ENSBBBG00000009704) #26 Bos ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00960000192687 ENSGT00940000154690.q #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Bos_a ANCESTRAL SPECIES 1 ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00990000203553.c.a.a.a.b ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00960000192687 ENSGT00940000154690.q #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Wild yak MODERN SPECIES 676 ENSBMUG00000015327 #19 ENSBMUG00000015342 #19 AGBL4 (ENSBMUG00000015405) #20 BEND5 (ENSBMUG00000015425) #21 ENSBMUG00000015436 ENSBMUG00000015445 ELAVL4 (ENSBMUG00000015604) #22 DMRTA2 (ENSBMUG00000015624) #24 FAF1 (ENSBMUG00000015674) #25 CDKN2C (ENSBMUG00000015705) #26 C1orf185 (ENSBMUG00000015719) RNF11 (ENSBMUG00000015733) TTC39A (ENSBMUG00000015807) #29 EPS15 (ENSBMUG00000016038) #30 ENSBMUG00000016376 #31 ENSBMUG00000016543 NRDC (ENSBMUG00000016703) #32 RAB3B (ENSBMUG00000016730) #33 TXNDC12 (ENSBMUG00000016772) #34 ENSBMUG00000016784 ENSBMUG00000016800 ZFYVE9 (ENSBMUG00000016829) Domestic yak MODERN SPECIES 22 ENSBGRG00000000946 CYP4X1 (ENSBGRG00000000906) PDZK1IP1 (ENSBGRG00000000884) #11 TAL1 (ENSBGRG00000000873) #12 STIL (ENSBGRG00000000847) #13 CMPK1 (ENSBGRG00000000768) #14 FOXD2 (ENSBGRG00000000734) TRABD2B (ENSBGRG00000000715) #15 ENSBGRG00000000659 #16 ENSBGRG00000000634 SLC5A9 (ENSBGRG00000000471) #17 ENSBGRG00000000443 SPATA6 (ENSBGRG00000000361) #19 ENSBGRG00000000329 BEND5 (ENSBGRG00000000244) #21 ELAVL4 (ENSBGRG00000008303) #22 ENSBGRG00000008263 DMRTA2 (ENSBGRG00000008234) #24 ENSBGRG00000008184 FAF1 (ENSBGRG00000007790) #25 CDKN2C (ENSBGRG00000007727) #26 ENSBGRG00000007699 ENSBGRG00000007678 C1orf185 (ENSBGRG00000007509) ENSBGRG00000007489 RNF11 (ENSBGRG00000007453) TTC39A (ENSBGRG00000006890) #29 EPS15 (ENSBGRG00000006427) #30 ENSBGRG00000004997 #31 NRDC (ENSBGRG00000004115) #32 RAB3B (ENSBGRG00000004067) #33 Bos_b ANCESTRAL SPECIES 1 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000153095.g.b.b.d.b ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000154831.q.a #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690.q #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT01100000263480.a.b.a.a.a.b.b.b.b.b.b.a.b.b.a ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a Hybrid Bos Indicus MODERN SPECIES 22 ENSBIXG00005012345 CYP4X1 (ENSBIXG00005012436) PDZK1IP1 (ENSBIXG00005012472) #11 TAL1 (ENSBIXG00005001347) #12 STIL (ENSBIXG00005001365) #13 CMPK1 (ENSBIXG00005012554) #14 FOXE3 (ENSBIXG00005012567) TRABD2B (ENSBIXG00005012610) #15 ENSBIXG00005012658 #16 SLC5A9 (ENSBIXG00005012722) #17 ENSBIXG00005012739 SPATA6 (ENSBIXG00005012777) #19 BEND5 (ENSBIXG00005012833) #21 ENSBIXG00005001430 AGBL4 (ENSBIXG00005012945) #20 ELAVL4 (ENSBIXG00005013087) #22 ENSBIXG00005013121 DMRTA2 (ENSBIXG00005013129) #24 ENSBIXG00005013142 ENSBIXG00005013185 #25 CDKN2C (ENSBIXG00005013218) #26 C1orf185 (ENSBIXG00005013246) RNF11 (ENSBIXG00005013258) TTC39A (ENSBIXG00005013555) #29 EPS15 (ENSBIXG00005013837) #30 OSBPL9 (ENSBIXG00005014176) #31 ENSBIXG00005014220 NRDC (ENSBIXG00005014778) #32 RAB3B (ENSBIXG00005014889) #33 ENSBIXG00005014899 TXNDC12 (ENSBIXG00005002157) #34 Cow MODERN SPECIES 22 PDZK1IP1 (ENSBTAG00000002555) #11 TAL1 (ENSBTAG00000005029) #12 STIL (ENSBTAG00000017844) #13 CMPK1 (ENSBTAG00000019956) #14 FOXE3 (ENSBTAG00000051575) FOXD2 (ENSBTAG00000045643) TRABD2B (ENSBTAG00000054324) #15 SKINT1 (ENSBTAG00000009192) #16 ENSBTAG00000054583 SLC5A9 (ENSBTAG00000014225) #17 SPATA6 (ENSBTAG00000003128) #19 ENSBTAG00000012722 #20 BEND5 (ENSBTAG00000009209) #21 ENSBTAG00000053607 ENSBTAG00000054981 #20 ELAVL4 (ENSBTAG00000021046) #22 DMRTA2 (ENSBTAG00000010414) #24 FAF1 (ENSBTAG00000014482) #25 CDKN2C (ENSBTAG00000011059) #26 C3H1orf185 (ENSBTAG00000009674) RNF11 (ENSBTAG00000054545) TTC39A (ENSBTAG00000002451) #29 ENSBTAG00000048722 EPS15 (ENSBTAG00000005542) #30 OSBPL9 (ENSBTAG00000021170) #31 NRDC (ENSBTAG00000021174) #32 RAB3B (ENSBTAG00000005337) #33 ENSBTAG00000049239 ENSBTAG00000052338 TXNDC12 (ENSBTAG00000011024) #34 BTF3L4 (ENSBTAG00000011025) #35 Siberian musk deer MODERN SPECIES 340 ENSMMSG00000014713 CYP4X1 (ENSMMSG00000014557) PDZK1IP1 (ENSMMSG00000014540) #11 TAL1 (ENSMMSG00000014528) #12 STIL (ENSMMSG00000014379) #13 ENSMMSG00000014328 #14 FOXE3 (ENSMMSG00000014313) FOXD2 (ENSMMSG00000014302) TRABD2B (ENSMMSG00000014286) #15 ENSMMSG00000014278 ##16 ENSMMSG00000014251 #16 SLC5A9 (ENSMMSG00000014113) #17 SPATA6 (ENSMMSG00000014025) #19 BEND5 (ENSMMSG00000013981) #21 AGBL4 (ENSMMSG00000013891) #20 ELAVL4 (ENSMMSG00000012846) #22 DMRTA2 (ENSMMSG00000012786) #24 ENSMMSG00000012776 FAF1 (ENSMMSG00000012758) #25 CDKN2C (ENSMMSG00000012734) #26 ENSMMSG00000012725 C1orf185 (ENSMMSG00000012641) RNF11 (ENSMMSG00000012629) TTC39A (ENSMMSG00000012294) #29 EPS15 (ENSMMSG00000011662) #30 ENSMMSG00000011598 OSBPL9 (ENSMMSG00000011045) #31 NRDC (ENSMMSG00000010652) #32 RAB3B (ENSMMSG00000010591) #33 TXNDC12 (ENSMMSG00000010552) #34 BTF3L4 (ENSMMSG00000010474) #35 Yarkand deer MODERN SPECIES 12 PDZK1IP1 (ENSCHYG00000023171) #11 TAL1 (ENSCHYG00000023140) #12 STIL (ENSCHYG00000023044) #13 CMPK1 (ENSCHYG00000022970) #14 FOXD2 (ENSCHYG00000022949) ENSCHYG00000022932 TRABD2B (ENSCHYG00000022894) #15 ENSCHYG00000022779 ##16 ENSCHYG00000022715 #16 ENSCHYG00000022669 SLC5A9 (ENSCHYG00000022514) #17 SPATA6 (ENSCHYG00000022292) #19 BEND5 (ENSCHYG00000022182) #21 ENSCHYG00000022139 AGBL4 (ENSCHYG00000021988) #20 ELAVL4 (ENSCHYG00000021125) #22 ENSCHYG00000020992 FAF1 (ENSCHYG00000020360) #25 CDKN2C (ENSCHYG00000020293) #26 C1orf185 (ENSCHYG00000020169) RNF11 (ENSCHYG00000020010) TTC39A (ENSCHYG00000019043) #29 EPS15 (ENSCHYG00000018363) #30 ENSCHYG00000018015 ENSCHYG00000016631 #31 ENSCHYG00000016488 NRDC (ENSCHYG00000012147) #32 RAB3B (ENSCHYG00000011948) #33 TXNDC12 (ENSCHYG00000011889) #34 BTF3L4 (ENSCHYG00000011776) #35 ZFYVE9 (ENSCHYG00000011418) Camelidae ANCESTRAL SPECIES 11 ENSGT00390000012765 #7 ENSGT00390000016446 #8 ENSGT00390000011196 #9 ENSGT00940000160927 ENSGT00940000155173 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00940000163721 #28 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00390000002443 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Arabian camel MODERN SPECIES 4 ATPAF1 (ENSCDRG00005019231) #7 TEX38 (ENSCDRG00005019244) #8 EFCAB14 (ENSCDRG00005019273) #9 CYP4X1 (ENSCDRG00005019322) ENSCDRG00005019371 ENSCDRG00005019396 #11 TAL1 (ENSCDRG00005019418) #12 STIL (ENSCDRG00005019454) #13 CMPK1 (ENSCDRG00005019485) #14 TRABD2B (ENSCDRG00005003535) #15 SLC5A9 (ENSCDRG00005003621) #17 ENSCDRG00005003726 #18 SPATA6 (ENSCDRG00005003747) #19 AGBL4 (ENSCDRG00005003837) #20 BEND5 (ENSCDRG00005003960) #21 ELAVL4 (ENSCDRG00005004051) #22 DMRTA2 (ENSCDRG00005004641) #24 FAF1 (ENSCDRG00005004702) #25 CDKN2C (ENSCDRG00005004767) #26 C1orf185 (ENSCDRG00005004794) TTC39A (ENSCDRG00005004896) #29 EPS15 (ENSCDRG00005005246) #30 OSBPL9 (ENSCDRG00005005422) #31 NRDC (ENSCDRG00005005602) #32 RAB3B (ENSCDRG00005005964) #33 TXNDC12 (ENSCDRG00005005982) #34 BTF3L4 (ENSCDRG00005006016) #35 ZFYVE9 (ENSCDRG00005006088) CC2D1B (ENSCDRG00005006195) ORC1 (ENSCDRG00005006434) PRPF38A (ENSCDRG00005006492) Alpaca MODERN SPECIES 2449 AGBL4 (ENSVPAG00000011604) #20 BEND5 (ENSVPAG00000011605) #21 ELAVL4 (ENSVPAG00000011606) #22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Carnivora ANCESTRAL SPECIES 1 ENSGT00390000011196 #9 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Caniformia ANCESTRAL SPECIES 2 ENSGT00390000011196 #9 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Canidae ANCESTRAL SPECIES 12 ENSGT00940000155173.n ENSGT00940000155173.m.e.a.a ENSGT00940000155173.m.e.a.b ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831.db.a #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Canis_lupus ANCESTRAL SPECIES 16 ENSGT00940000155173.m.f ENSGT00940000155173.m.e.a.a ENSGT00940000155173.m.e.a.b ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831.db.a #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Dingo MODERN SPECIES 344 ENSCAFG00020014560 ENSCAFG00020014556 CYP4X1 (ENSCAFG00020014528) PDZK1IP1 (ENSCAFG00020014525) #11 TAL1 (ENSCAFG00020014522) #12 STIL (ENSCAFG00020014512) #13 CMPK1 (ENSCAFG00020014509) #14 FOXE3 (ENSCAFG00020014507) FOXD2 (ENSCAFG00020014506) TRABD2B (ENSCAFG00020014503) #15 SLC5A9 (ENSCAFG00020014477) #17 SPATA6 (ENSCAFG00020014474) #19 ENSCAFG00020014472 #20 ENSCAFG00020014471 #20 BEND5 (ENSCAFG00020014470) #21 ELAVL4 (ENSCAFG00020013581) #22 DMRTA2 (ENSCAFG00020013554) #24 ENSCAFG00020013547 ENSCAFG00020013544 ENSCAFG00020013515 #25 CDKN2C (ENSCAFG00020013503) #26 C1orf185 (ENSCAFG00020013497) RNF11 (ENSCAFG00020013494) TTC39A (ENSCAFG00020013487) #29 EPS15 (ENSCAFG00020013470) #30 OSBPL9 (ENSCAFG00020013459) #31 NRDC (ENSCAFG00020011213) #32 RAB3B (ENSCAFG00020011054) #33 TXNDC12 (ENSCAFG00020011048) #34 BTF3L4 (ENSCAFG00020011045) #35 ZFYVE9 (ENSCAFG00020011018) Dog MODERN SPECIES 6 CYP4B1 (ENSCAFG00845018109) CYP4A11 (ENSCAFG00845018002) CYP4A38 (ENSCAFG00845017288) ENSCAFG00845017005 CYP4X1 (ENSCAFG00845016805) PDZK1IP1 (ENSCAFG00845016726) #11 TAL1 (ENSCAFG00845016668) #12 STIL (ENSCAFG00845016474) #13 CMPK1 (ENSCAFG00845016195) #14 FOXE3 (ENSCAFG00845027178) FOXD2 (ENSCAFG00845027149) TRABD2B (ENSCAFG00845027015) #15 SLC5A9 (ENSCAFG00845026902) #17 SPATA6 (ENSCAFG00845026650) #19 AGBL4 (ENSCAFG00845025876) #21 ELAVL4 (ENSCAFG00845025265) #22 DMRTA2 (ENSCAFG00845025044) #24 ENSCAFG00845024999 FAF1 (ENSCAFG00845024609) #25 CDKN2C (ENSCAFG00845024510) #26 C1orf185 (ENSCAFG00845024301) RNF11 (ENSCAFG00845024230) TTC39A (ENSCAFG00845023616) #29 EPS15 (ENSCAFG00845022599) #30 OSBPL9 (ENSCAFG00845021857) #31 NRDC (ENSCAFG00845021372) #32 TXNDC12 (ENSCAFG00845021135) #33 BTF3L4 (ENSCAFG00845020858) #35 ZFYVE9 (ENSCAFG00845020399) CC2D1B (ENSCAFG00845020123) ORC1 (ENSCAFG00845019988) Red fox MODERN SPECIES 9 CYP4B1 (ENSVVUG00000007000) ENSVVUG00000006767 ENSVVUG00000006748 ENSVVUG00000006722 ENSVVUG00000006690 CYP4X1 (ENSVVUG00000006664) PDZK1IP1 (ENSVVUG00000006655) #11 ENSVVUG00000006648 #12 STIL (ENSVVUG00000006441) #13 CMPK1 (ENSVVUG00000006426) #14 TRABD2B (ENSVVUG00000006378) #15 SLC5A9 (ENSVVUG00000006359) #17 SPATA6 (ENSVVUG00000006346) #19 ENSVVUG00000006309 #20 BEND5 (ENSVVUG00000006293) #21 ELAVL4 (ENSVVUG00000006175) #22 ENSVVUG00000006092 ENSVVUG00000006087 ENSVVUG00000006081 FAF1 (ENSVVUG00000006069) #25 CDKN2C (ENSVVUG00000006026) #26 C1orf185 (ENSVVUG00000005980) ENSVVUG00000005976 RNF11 (ENSVVUG00000005971) TTC39A (ENSVVUG00000005650) #29 EPS15 (ENSVVUG00000004902) #30 OSBPL9 (ENSVVUG00000004835) #31 NRDC (ENSVVUG00000004788) #32 RAB3B (ENSVVUG00000004769) #33 KTI12 (ENSVVUG00000004765) TXNDC12 (ENSVVUG00000004760) #34 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00390000016446 #8 ENSGT00390000011196 #9 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00950000185079.c ENSGT00940000154290.a Ursidae ANCESTRAL SPECIES ENSGT00390000016446 #8 ENSGT00390000011196 #9 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000161273 #15 ENSGT00940000157546.g #17 ENSGT00940000157546.h #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT01010000229967 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00950000185079.c Ursus ANCESTRAL SPECIES 19 ENSGT00940000162886 ENSGT01050000244898.a.a.b ENSGT00390000012765 #7 ENSGT00390000016446 #8 ENSGT00390000011196 #9 ENSGT00940000161441.d ENSGT00940000155173.m ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000157546.h #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00950000185079.c ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Polar bear MODERN SPECIES 218 MOB3C (ENSUMAG00000023559) ATPAF1 (ENSUMAG00000023558) #7 TEX38 (ENSUMAG00000023557) #8 EFCAB14 (ENSUMAG00000023556) #9 CYP4B1 (ENSUMAG00000023554) ENSUMAG00000023368 CYP4X1 (ENSUMAG00000023337) PDZK1IP1 (ENSUMAG00000023333) #11 STIL (ENSUMAG00000023306) #13 CMPK1 (ENSUMAG00000023298) #14 ENSUMAG00000023291 #17 SPATA6 (ENSUMAG00000023285) #19 ENSUMAG00000023284 #20 ENSUMAG00000023282 #21 ENSUMAG00000023280 ELAVL4 (ENSUMAG00000023149) #22 ENSUMAG00000023107 ENSUMAG00000023105 FAF1 (ENSUMAG00000023099) #25 CDKN2C (ENSUMAG00000023096) #26 C1orf185 (ENSUMAG00000023093) RNF11 (ENSUMAG00000023091) TTC39A (ENSUMAG00000023064) #29 EPS15 (ENSUMAG00000022892) #30 OSBPL9 (ENSUMAG00000022814) #31 NRDC (ENSUMAG00000022809) #32 RAB3B (ENSUMAG00000022807) #33 ENSUMAG00000022804 TXNDC12 (ENSUMAG00000022801) #34 BTF3L4 (ENSUMAG00000022798) #35 ENSUMAG00000022797 American black bear MODERN SPECIES 3634 ELAVL4 (ENSUAMG00000013026) #22 Giant Panda MODERN SPECIES 11 ENSAMEG00000025041 TEX38 (ENSAMEG00000020215) #8 EFCAB14 (ENSAMEG00000014050) #9 CYP4B1 (ENSAMEG00000014075) ENSAMEG00000029837 CYP4X1 (ENSAMEG00000000016) PDZK1IP1 (ENSAMEG00000024007) #11 TAL1 (ENSAMEG00000029725) #12 STIL (ENSAMEG00000000013) #13 CMPK1 (ENSAMEG00000000012) #14 TRABD2B (ENSAMEG00000018869) #15 SLC5A9 (ENSAMEG00000008581) #17 SPATA6 (ENSAMEG00000008559) #19 AGBL4 (ENSAMEG00000009391) #20 BEND5 (ENSAMEG00000009379) #21 ELAVL4 (ENSAMEG00000017455) #22 ENSAMEG00000029933 DMRTA2 (ENSAMEG00000026233) #24 FAF1 (ENSAMEG00000017472) #25 ENSAMEG00000031167 CDKN2C (ENSAMEG00000028782) #26 C1orf185 (ENSAMEG00000024320) RNF11 (ENSAMEG00000017484) TTC39A (ENSAMEG00000017488) #29 EPS15 (ENSAMEG00000017515) #30 OSBPL9 (ENSAMEG00000008968) #31 NRDC (ENSAMEG00000009034) #32 ENSAMEG00000027180 RAB3B (ENSAMEG00000009140) #33 TXNDC12 (ENSAMEG00000009146) #34 ENSAMEG00000030584 Mustelinae ANCESTRAL SPECIES 39 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00900000142372 ENSGT00940000154296 #35 ENSGT00950000185079.c ENSGT00940000154290.a American mink MODERN SPECIES 361 ELAVL4 (ENSNVIG00000018303) #22 DMRTA2 (ENSNVIG00000018412) #24 FAF1 (ENSNVIG00000018426) #25 CDN2C (ENSNVIG00000018452) #26 ENSNVIG00000018460 C1orf185 (ENSNVIG00000018467) RNF11 (ENSNVIG00000018471) E7EQY9 (ENSNVIG00000018488) #29 EPS15 (ENSNVIG00000018625) #30 Ferret MODERN SPECIES 361 ELAVL4 (ENSMPUG00000007192) #22 DMRTA2 (ENSMPUG00000007160) #24 FAF1 (ENSMPUG00000007136) #25 CDKN2C (ENSMPUG00000007132) #26 RNF11 (ENSMPUG00000007108) TTC39A (ENSMPUG00000007092) #29 EPS15 (ENSMPUG00000007072) #30 ENSMPUG00000007061 OSBPL9 (ENSMPUG00000007053) #31 NRDC (ENSMPUG00000007032) #32 RAB3B (ENSMPUG00000007029) #33 TXNDC12 (ENSMPUG00000007020) #34 BTF3L4 (ENSMPUG00000006966) #35 ZFYVE9 (ENSMPUG00000006950) CC2D1B (ENSMPUG00000006927) ORC1 (ENSMPUG00000006904) Felidae ANCESTRAL SPECIES 10 ENSGT00940000155173.m.b ENSGT00940000155173.m.a.a ENSGT00940000155173.m.a.b ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Panthera ANCESTRAL SPECIES 4 ENSGT00940000155173.m.a.a ENSGT00940000155173.m.a.b ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00950000182922.a.a.a.b.a.b.a.a.c.a.a ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B Tiger MODERN SPECIES 100 ENSPTIG00000020880 CYP4A106 (ENSPTIG00000020491) CYP4A37 (ENSPTIG00000018827) CYP4X1 (ENSPTIG00000018303) PDZK1IP1 (ENSPTIG00000018010) #11 TAL1 (ENSPTIG00000017616) #12 STIL (ENSPTIG00000011691) #13 CMPK1 (ENSPTIG00000011122) #14 TRABD2B (ENSPTIG00000009870) #15 SLC5A9 (ENSPTIG00000007011) #17 SPATA6 (ENSPTIG00000021470) #19 AGBL4 (ENSPTIG00000021182) #20 BEND5 (ENSPTIG00000020902) #21 ENSPTIG00000005063 ENSPTIG00000019852 #20 ELAVL4 (ENSPTIG00000016727) #22 FAF1 (ENSPTIG00000014264) #25 CDKN2C (ENSPTIG00000013155) #26 C1orf185 (ENSPTIG00000012429) RNF11 (ENSPTIG00000012147) TTC39A (ENSPTIG00000006822) #29 EPS15 (ENSPTIG00000021361) #30 OSBPL9 (ENSPTIG00000014514) #31 ENSPTIG00000014000 NRDC (ENSPTIG00000011593) #32 RAB3B (ENSPTIG00000010883) #33 TXNDC12 (ENSPTIG00000009168) #34 ENSPTIG00000006624 #35 ZFYVE9 (ENSPTIG00000020130) CC2D1B (ENSPTIG00000018871) ORC1 (ENSPTIG00000015613) Panthera_a ANCESTRAL SPECIES 11 ENSGT00940000155173.m.a.a ENSGT00940000155173.m.a.b ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00950000182922.a.a.a.b.a.b.a.a.c.a.a ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a ENSGT00530000063498.B leopard MODERN SPECIES 16 CYP4A37 (ENSPPRG00000007723) CYP4X1 (ENSPPRG00000008167) PDZK1IP1 (ENSPPRG00000008341) #11 TAL1 (ENSPPRG00000008561) #12 STIL (ENSPPRG00000010998) #13 ENSPPRG00000012334 #14 FOXE3 (ENSPPRG00000012774) FOXD2 (ENSPPRG00000017402) TRABD2B (ENSPPRG00000013314) #15 SLC5A9 (ENSPPRG00000020008) #17 SPATA6 (ENSPPRG00000023213) #19 AGBL4 (ENSPPRG00000022863) #20 BEND5 (ENSPPRG00000022625) #21 ENSPPRG00000017680 ENSPPRG00000001721 #20 ELAVL4 (ENSPPRG00000002764) #22 DMRTA2 (ENSPPRG00000003651) #24 FAF1 (ENSPPRG00000005301) #25 CDKN2C (ENSPPRG00000005623) #26 C1orf185 (ENSPPRG00000006868) RNF11 (ENSPPRG00000007187) TTC39A (ENSPPRG00000010046) #29 ENSPPRG00000011797 EPS15 (ENSPPRG00000014230) #30 OSBPL9 (ENSPPRG00000002600) #31 ENSPPRG00000003302 NRDC (ENSPPRG00000005332) #32 RAB3B (ENSPPRG00000006055) #33 TXNDC12 (ENSPPRG00000006551) #34 ENSPPRG00000007572 #35 ZFYVE9 (ENSPPRG00000009797) lion MODERN SPECIES 8 ENSPLOG00000007060 ENSPLOG00000006991 ENSPLOG00000006700 CYP4X1 (ENSPLOG00000006599) PDZK1IP1 (ENSPLOG00000006576) #11 TAL1 (ENSPLOG00000006549) #12 STIL (ENSPLOG00000006499) #13 CMPK1 (ENSPLOG00000006430) #14 FOXE3 (ENSPLOG00000006409) FOXD2 (ENSPLOG00000006398) TRABD2B (ENSPLOG00000006352) #15 SLC5A9 (ENSPLOG00000006218) #17 SPATA6 (ENSPLOG00000006148) #19 BEND5 (ENSPLOG00000006114) #21 AGBL4 (ENSPLOG00000006006) #20 ELAVL4 (ENSPLOG00000005634) #22 ENSPLOG00000005447 DMRTA2 (ENSPLOG00000005423) #24 ENSPLOG00000005409 FAF1 (ENSPLOG00000005328) #25 CDKN2C (ENSPLOG00000005297) #26 C1orf185 (ENSPLOG00000005287) RNF11 (ENSPLOG00000005279) TTC39A (ENSPLOG00000005228) #29 ENSPLOG00000005215 EPS15 (ENSPLOG00000005145) #30 ENSPLOG00000004872 #31 ENSPLOG00000004732 NRDC (ENSPLOG00000019705) #32 RAB3B (ENSPLOG00000019621) #33 ENSPLOG00000019597 Cat MODERN SPECIES 239 ENSFCAG00000038068 ENSFCAG00000037991 CYP4A37 (ENSFCAG00000040744) CYP4X1 (ENSFCAG00000007168) PDZK1IP1 (ENSFCAG00000019308) #11 TAL1 (ENSFCAG00000045414) #12 STIL (ENSFCAG00000012141) #13 CMPK1 (ENSFCAG00000025426) #14 FOXE3 (ENSFCAG00000046511) FOXD2 (ENSFCAG00000044804) TRABD2B (ENSFCAG00000000546) #15 SLC5A9 (ENSFCAG00000000548) #17 SPATA6 (ENSFCAG00000029729) #19 AGBL4 (ENSFCAG00000000550) #20 ENSFCAG00000022016 ELAVL4 (ENSFCAG00000010438) #22 DMRTA2 (ENSFCAG00000045950) #24 FAF1 (ENSFCAG00000011327) #25 ENSFCAG00000028644 CDKN2C (ENSFCAG00000033306) #26 CC1H1orf185 (ENSFCAG00000043741) RNF11 (ENSFCAG00000035271) TTC39A (ENSFCAG00000014565) #29 EPS15 (ENSFCAG00000027650) #30 OSBPL9 (ENSFCAG00000010298) #31 NRDC (ENSFCAG00000022018) #32 ENSFCAG00000031410 TXNDC12 (ENSFCAG00000023885) #33 BTF3L4 (ENSFCAG00000024164) #35 ZFYVE9 (ENSFCAG00000024078) CC2D1B (ENSFCAG00000002516) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Equus ANCESTRAL SPECIES 2 ENSGT00940000155173.q.a.a ENSGT00940000161441.c.b.a ENSGT00940000155173.q.a.b ENSGT00940000155173.q.b ENSGT00940000160927 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000161273 #15 ENSGT00940000157546 #17 ENSGT00530000063821.b.a #19 ENSGT00390000001724 #21 ENSGT00940000155042.b #20 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00390000002443 ENSGT00900000142372 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 Donkey MODERN SPECIES 25 ENSEASG00005010169 ENSEASG00005014485 ENSEASG00005010633 ENSEASG00005010640 ENSEASG00005010647 ENSEASG00005034479 ENSEASG00005023820 #11 ENSEASG00005038126 #12 STIL (ENSEASG00005010657) #13 CMPK1 (ENSEASG00005010695) #14 TRABD2B (ENSEASG00005010700) #15 SLC5A9 (ENSEASG00005010710) #17 SPATA6 (ENSEASG00005010718) #19 AGBL4 (ENSEASG00005010721) #20 BEND5 (ENSEASG00005010723) #21 ELAVL4 (ENSEASG00005010728) #22 DMRTA2 (ENSEASG00005037248) #24 FAF1 (ENSEASG00005010732) #25 CDKN2C (ENSEASG00005010733) #26 C1orf185 (ENSEASG00005037128) RNF11 (ENSEASG00005037659) TTC39A (ENSEASG00005010736) #29 EPS15 (ENSEASG00005010751) #30 ENSEASG00005010925 ENSEASG00005030901 #31 OSBPL9 (ENSEASG00005010962) #31 NRDC (ENSEASG00005011045) #32 RAB3B (ENSEASG00005027002) #33 TXNDC12 (ENSEASG00005029657) #34 KTI12 (ENSEASG00005028147) ENSEASG00005014402 Horse MODERN SPECIES 11 ENSECAG00000046409 ENSECAG00000045102 ENSECAG00000027949 ENSECAG00000033081 CYP4X1 (ENSECAG00000020100) TAL1 (ENSECAG00000018746) #12 STIL (ENSECAG00000011152) #13 CMPK1 (ENSECAG00000000428) #14 FOXE3 (ENSECAG00000049916) TRABD2B (ENSECAG00000022697) #15 SLC5A9 (ENSECAG00000011684) #17 SPATA6 (ENSECAG00000000158) #19 ENSECAG00000055301 #20 BEND5 (ENSECAG00000051417) #21 ENSECAG00000059132 #20 ELAVL4 (ENSECAG00000022284) #22 DMRTA2 (ENSECAG00000029061) #24 ENSECAG00000044105 FAF1 (ENSECAG00000008495) #25 CDKN2C (ENSECAG00000004817) #26 C2H1orf185 (ENSECAG00000025041) ENSECAG00000055972 RNF11 (ENSECAG00000036831) TTC39A (ENSECAG00000015196) #29 EPS15 (ENSECAG00000020824) #30 CALR4 (ENSECAG00000015205) ENSECAG00000017935 #31 NRDC (ENSECAG00000021612) #32 RAB3B (ENSECAG00000015669) #33 ENSECAG00000032332 KTI12 (ENSECAG00000060027) Chiroptera ANCESTRAL SPECIES ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00390000002443 ENSGT00940000154296 #35 ENSGT00940000154290.a Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000154660.b #11 ENSGT00940000159889 #12 ENSGT00390000007310 #13 ENSGT00940000160589 #14 ENSGT00940000163987 ENSGT00940000157140.b.a.b.a ENSGT00940000161273 #15 ENSGT00940000162562.B ##16 ENSGT00940000162562.A #16 ENSGT00940000164707 ENSGT00940000157546 #17 ENSGT00990000204587 #18 ENSGT00530000063821.b.a #19 ENSGT00940000155042.b #20 ENSGT00390000001724 #21 ENSGT00940000157399 #22 ENSGT00940000161649 #24 ENSGT00940000154831 #25 ENSGT00940000160194 #26 ENSGT00390000000797 ENSGT00730000110988 ENSGT00950000182917.a.b.a #29 ENSGT00940000155751 #30 ENSGT00950000182915.b.b.b.a ENSGT00940000154690 #31 ENSGT00940000155026 #32 ENSGT00940000159943 #33 ENSGT00530000063273.a #34 ENSGT00940000154296 #35 ENSGT00940000154290.a ENSGT00390000009595.a Greater horseshoe bat MODERN SPECIES 27 STIL (ENSRFEG00010001982) #13 ENSRFEG00010002024 CMPK1 (ENSRFEG00010002044) #14 FOXE3 (ENSRFEG00010002079) FOXD2 (ENSRFEG00010002087) TRABD2B (ENSRFEG00010002104) #15 ENSRFEG00010002138 ENSRFEG00010002154 ##16 ENSRFEG00010002180 #16 ENSRFEG00010002204 SLC5A9 (ENSRFEG00010002222) #17 ENSRFEG00010002251 #18 SPATA6 (ENSRFEG00010002287) #19 AGBL4 (ENSRFEG00010002410) #20 BEND5 (ENSRFEG00010002514) #21 ELAVL4 (ENSRFEG00010002640) #22 DMRTA2 (ENSRFEG00010002791) #24 FAF1 (ENSRFEG00010002825) #25 CDKN2C (ENSRFEG00010002917) #26 ENSRFEG00010002937 RNF11 (ENSRFEG00010002953) TTC39A (ENSRFEG00010003039) #29 EPS15 (ENSRFEG00010003189) #30 ENSRFEG00010003316 OSBPL9 (ENSRFEG00010003405) #31 NRDC (ENSRFEG00010003552) #32 RAB3B (ENSRFEG00010003630) #33 TXNDC12 (ENSRFEG00010003659) #34 ENSRFEG00010003696 #35 ZFYVE9 (ENSRFEG00010003740) CC2D1B (ENSRFEG00010003800) Microbat MODERN SPECIES 974 CYP4B1 (ENSMLUG00000002776) ENSMLUG00000024150 ENSMLUG00000025621 ENSMLUG00000002780 CYP4X1 (ENSMLUG00000011781) PDZK1IP1 (ENSMLUG00000006083) #11 TAL1 (ENSMLUG00000006388) #12 STIL (ENSMLUG00000006395) #13 TRABD2B (ENSMLUG00000010918) #15 ENSMLUG00000022445 ##16 ENSMLUG00000024145 #16 SLC5A9 (ENSMLUG00000010198) #17 SPATA6 (ENSMLUG00000011417) #19 ENSMLUG00000016567 #20 BEND5 (ENSMLUG00000016578) #21 ELAVL4 (ENSMLUG00000006226) #22 DMRTA2 (ENSMLUG00000006249) #24 FAF1 (ENSMLUG00000006252) #25 CDKN2C (ENSMLUG00000006627) #26 C1orf185 (ENSMLUG00000023716) ENSMLUG00000004439 TTC39A (ENSMLUG00000004443) #29 EPS15 (ENSMLUG00000004454) #30 OSBPL9 (ENSMLUG00000009199) #31 NRDC (ENSMLUG00000009233) #32 RAB3B (ENSMLUG00000016868) #33 TXNDC12 (ENSMLUG00000016872) #34 ENSMLUG00000016884 #35 ZFYVE9 (ENSMLUG00000001012) CC2D1B (ENSMLUG00000001023) ORC1 (ENSMLUG00000001040) Megabat MODERN SPECIES 141 SLC5A9 (ENSPVAG00000003625) #17 SPATA6 (ENSPVAG00000003628) #19 AGBL4 (ENSPVAG00000003630) #20 ELAVL4 (ENSPVAG00000003632) #22