Mus	ANCESTRAL SPECIES	4	ENSGT00550000076001 #7	ENSGT00390000008848 #9	ENSGT00950000183160.A #10	ENSGT00940000159712 #11	ENSGT00940000163088	ENSGT00940000157114 #12	ENSGT00940000158436 #13	ENSGT00390000010215.B #14	ENSGT00550000074936 #16	ENSGT00390000006114 #15	ENSGT00510000048428 #17	ENSGT00390000003924 #18	ENSGT00940000158893 #19	ENSGT00940000157126 #20	ENSGT00940000159519 #21	ENSGT00940000158261 #22	ENSGT00990000203615.b.b #23	ENSGT01080000257365.b.a.b.a.b #24	ENSGT00940000154313.d #25	ENSGT00940000159663 #26	ENSGT00940000157181 #27	ENSGT00390000016213 #28	ENSGT00940000158740 #29	ENSGT00530000063252.a.a #30	ENSGT00940000155418.b #31	ENSGT00940000153306.A.b #32	ENSGT00940000159642 #33	ENSGT00940000155801 #34	ENSGT00950000182856.b #35	ENSGT00940000158679 #36	ENSGT00940000160304 #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00550000076001.a #7	ENSGT00390000008848 #9	ENSGT00950000183160.A #10	ENSGT00940000159712 #11	ENSGT00940000163088	ENSGT00940000157114 #12	ENSGT00940000158436 #13	ENSGT00390000010215.B #14	ENSGT00550000074936 #16	ENSGT00390000006114 #15	ENSGT00510000048428 #17	ENSGT00390000003924 #18	ENSGT00940000158893 #19	ENSGT00940000157126 #20	ENSGT00940000159519 #21	ENSGT00940000158261 #22	ENSGT00990000203615.b.b #23	ENSGT01080000257365.b.a.b.a.b #24	ENSGT00940000154313.d #25	ENSGT00940000159663 #26	ENSGT00940000157181 #27	ENSGT00390000016213 #28	ENSGT00940000158740 #29	ENSGT00530000063252.a.a #30	ENSGT00940000155418.b #31	ENSGT00940000153306.A.b #32	ENSGT00940000159642 #33	ENSGT00940000155801 #34	ENSGT00950000182856.b #35	ENSGT00940000158679 #36	ENSGT00940000160304 #37
Ryukyu mouse	MODERN SPECIES	18	MGP_CAROLIEiJ_G0031960 #7	Pate2 (MGP_CAROLIEiJ_G0031959) #8	Hyls1 (MGP_CAROLIEiJ_G0031958) #9	Pus3 (MGP_CAROLIEiJ_G0031957) #10	Ddx25 (MGP_CAROLIEiJ_G0031956) #11	Cdon (MGP_CAROLIEiJ_G0031955) #12	Rpusd4 (MGP_CAROLIEiJ_G0031954) #13	Fam118b (MGP_CAROLIEiJ_G0031953) #14	Foxred1 (MGP_CAROLIEiJ_G0031952) #15	Srpr (MGP_CAROLIEiJ_G0031951) #16	Tirap (MGP_CAROLIEiJ_G0031950) #17	Dcps (MGP_CAROLIEiJ_G0031949) #18	St3gal4 (MGP_CAROLIEiJ_G0031948) #19	Kirrel3 (MGP_CAROLIEiJ_G0031947) #20	Ets1 (MGP_CAROLIEiJ_G0031946) #21	Fli1 (MGP_CAROLIEiJ_G0031945) #22	Kcnj1 (MGP_CAROLIEiJ_G0031944) #23	Kcnj5 (MGP_CAROLIEiJ_G0031943) #24	Arhgap32 (MGP_CAROLIEiJ_G0031942) #25	Barx2 (MGP_CAROLIEiJ_G0031941) #26	Tmem45b (MGP_CAROLIEiJ_G0031940) #27	Nfrkb (MGP_CAROLIEiJ_G0031939) #28	MGP_CAROLIEiJ_G0031938 #29	Aplp2 (MGP_CAROLIEiJ_G0031937) #30	St14 (MGP_CAROLIEiJ_G0031936) #31	MGP_CAROLIEiJ_G0031935 #32	Adamts8 (MGP_CAROLIEiJ_G0031934) #33	Adamts15 (MGP_CAROLIEiJ_G0031933) #34	Snx19 (MGP_CAROLIEiJ_G0031932) #35	Ntm (MGP_CAROLIEiJ_G0031931) #36	Opcml (MGP_CAROLIEiJ_G0031930) #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00550000076001.a #7	ENSGT00390000008848 #9	ENSGT00950000183160.A #10	ENSGT00940000159712 #11	ENSGT00940000163088	ENSGT00940000157114 #12	ENSGT00940000158436 #13	ENSGT00390000010215.B #14	ENSGT00550000074936.a #16	ENSGT00390000006114 #15	ENSGT00510000048428 #17	ENSGT00390000003924 #18	ENSGT00940000158893 #19	ENSGT00940000157126 #20	ENSGT00940000159519 #21	ENSGT00940000158261 #22	ENSGT00990000203615.b.b #23	ENSGT01080000257365.b.a.b.a.b #24	ENSGT00940000154313.d #25	ENSGT00940000159663 #26	ENSGT00940000157181 #27	ENSGT00390000016213 #28	ENSGT00940000158740 #29	ENSGT00530000063252.a.a #30	ENSGT00940000155418.b #31	ENSGT00940000153306.A.b #32	ENSGT00940000159642 #33	ENSGT00940000155801 #34	ENSGT00950000182856.b #35	ENSGT00940000158679 #36	ENSGT00940000160304 #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00550000076001.a #7	ENSGT00390000008848 #9	ENSGT00950000183160.A #10	ENSGT00940000159712 #11	ENSGT00940000163088	ENSGT00940000157114 #12	ENSGT00940000158436 #13	ENSGT00390000010215.B #14	ENSGT00550000074936.a #16	ENSGT00390000006114 #15	ENSGT00510000048428 #17	ENSGT00390000003924 #18	ENSGT00940000158893 #19	ENSGT00940000157126 #20	ENSGT00940000159519 #21	ENSGT00940000158261 #22	ENSGT00990000203615.b.b #23	ENSGT01080000257365.b.a.b.a.b #24	ENSGT00940000154313.d #25	ENSGT00940000159663 #26	ENSGT00940000157181 #27	ENSGT00390000016213 #28	ENSGT00940000158740 #29	ENSGT00530000063252.a.a #30	ENSGT00940000155418.b #31	ENSGT00940000153306.A.b #32	ENSGT00940000159642 #33	ENSGT00940000155801 #34	ENSGT00950000182856.b #35	ENSGT00940000158679 #36	ENSGT00940000160304 #37
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3337	Hyls1 (ENSMSIG00000008977) #9	Pus3 (ENSMSIG00000008983) #10	Ddx25 (ENSMSIG00000009002) #11	ENSMSIG00000009021	Gm1113 (ENSMSIG00000009064)	Cdon (ENSMSIG00000009081) #12	Rpusd4 (ENSMSIG00000009157) #13	Fam118b (ENSMSIG00000009187) #14	Srpr (ENSMSIG00000009265) #16	Foxred1 (ENSMSIG00000009311) #15	Tirap (ENSMSIG00000009381) #17	Dcps (ENSMSIG00000009452) #18	St3gal4 (ENSMSIG00000009536) #19	Kirrel3 (ENSMSIG00000009576) #20	Ets1 (ENSMSIG00000009911) #21	ENSMSIG00000010061 #22	ENSMSIG00000010066 #22	Kcnj1 (ENSMSIG00000010090) #23	Kcnj5 (ENSMSIG00000010116) #24	Arhgap32 (ENSMSIG00000010137) #25	Barx2 (ENSMSIG00000010238) #26	Tmem45b (ENSMSIG00000010243) #27	Nfrkb (ENSMSIG00000010265) #28	Prdm10 (ENSMSIG00000010330) #29	Aplp2 (ENSMSIG00000010658) #30	St14 (ENSMSIG00000010864) #31	Zbtb44 (ENSMSIG00000010897) #32	Adamts8 (ENSMSIG00000010926) #33	Adamts15 (ENSMSIG00000010946) #34	ENSMSIG00000010990	ENSMSIG00000010997 #35
Steppe mouse	MODERN SPECIES	3337	Pus3 (ENSMSIG00000008983) #10	Ddx25 (ENSMSIG00000009002) #11	ENSMSIG00000009021	Gm1113 (ENSMSIG00000009064)	Cdon (ENSMSIG00000009081) #12	Rpusd4 (ENSMSIG00000009157) #13	Fam118b (ENSMSIG00000009187) #14	Srpr (ENSMSIG00000009265) #16	Foxred1 (ENSMSIG00000009311) #15	Tirap (ENSMSIG00000009381) #17	Dcps (ENSMSIG00000009452) #18	St3gal4 (ENSMSIG00000009536) #19	Kirrel3 (ENSMSIG00000009576) #20	Ets1 (ENSMSIG00000009911) #21	ENSMSIG00000010061 #22	ENSMSIG00000010066 #22	Kcnj1 (ENSMSIG00000010090) #23	Kcnj5 (ENSMSIG00000010116) #24	Arhgap32 (ENSMSIG00000010137) #25	Barx2 (ENSMSIG00000010238) #26	Tmem45b (ENSMSIG00000010243) #27	Nfrkb (ENSMSIG00000010265) #28	Prdm10 (ENSMSIG00000010330) #29	Aplp2 (ENSMSIG00000010658) #30	St14 (ENSMSIG00000010864) #31	Zbtb44 (ENSMSIG00000010897) #32	Adamts8 (ENSMSIG00000010926) #33	Adamts15 (ENSMSIG00000010946) #34	ENSMSIG00000010990	ENSMSIG00000010997 #35
spretus	MODERN SPECIES	18	Pate4 (MGP_SPRETEiJ_G0033084) #7	Pate2 (MGP_SPRETEiJ_G0033083) #8	Hyls1 (MGP_SPRETEiJ_G0033082) #9	Pus3 (MGP_SPRETEiJ_G0033081) #10	Ddx25 (MGP_SPRETEiJ_G0033080) #11	Cdon (MGP_SPRETEiJ_G0033079) #12	Rpusd4 (MGP_SPRETEiJ_G0033078) #13	Fam118b (MGP_SPRETEiJ_G0033077) #14	Foxred1 (MGP_SPRETEiJ_G0033076) #15	Srpr (MGP_SPRETEiJ_G0033075) #16	Tirap (MGP_SPRETEiJ_G0033074) #17	Dcps (MGP_SPRETEiJ_G0033073) #18	St3gal4 (MGP_SPRETEiJ_G0033072) #19	Kirrel3 (MGP_SPRETEiJ_G0033071) #20	Ets1 (MGP_SPRETEiJ_G0033070) #21	Fli1 (MGP_SPRETEiJ_G0033069) #22	Kcnj1 (MGP_SPRETEiJ_G0033068) #23	Kcnj5 (MGP_SPRETEiJ_G0033067) #24	Arhgap32 (MGP_SPRETEiJ_G0033066) #25	Barx2 (MGP_SPRETEiJ_G0033065) #26	Tmem45b (MGP_SPRETEiJ_G0033064) #27	MGP_SPRETEiJ_G0033063	Nfrkb (MGP_SPRETEiJ_G0033062) #28	MGP_SPRETEiJ_G0033061 #29	Aplp2 (MGP_SPRETEiJ_G0033060) #30	St14 (MGP_SPRETEiJ_G0033059) #31	MGP_SPRETEiJ_G0033058 #32	Adamts8 (MGP_SPRETEiJ_G0033057) #33	Adamts15 (MGP_SPRETEiJ_G0033056) #34	Snx19 (MGP_SPRETEiJ_G0033055) #35	Ntm (MGP_SPRETEiJ_G0033054) #36
Mouse	MODERN SPECIES	18	Pate2 (ENSMUSG00000074452) #8	Hyls1 (ENSMUSG00000050555) #9	Pus3 (ENSMUSG00000032103) #10	Ddx25 (ENSMUSG00000032101) #11	Gm1113 (ENSMUSG00000098590)	Cdon (ENSMUSG00000038119) #12	Rpusd4 (ENSMUSG00000032044) #13	Fam118b (ENSMUSG00000050471) #14	Foxred1 (ENSMUSG00000039048) #15	Srpr (ENSMUSG00000032042) #16	Tirap (ENSMUSG00000032041) #17	Dcps (ENSMUSG00000032040) #18	St3gal4 (ENSMUSG00000032038) #19	Kirrel3 (ENSMUSG00000032036) #20	Ets1 (ENSMUSG00000032035) #21	Fli1 (ENSMUSG00000016087) #22	Kcnj1 (ENSMUSG00000041248) #23	Kcnj5 (ENSMUSG00000032034) #24	Arhgap32 (ENSMUSG00000041444) #25	Barx2 (ENSMUSG00000032033) #26	Tmem45b (ENSMUSG00000041737) #27	Nfrkb (ENSMUSG00000042185) #28	Prdm10 (ENSMUSG00000042496) #29	Aplp2 (ENSMUSG00000031996) #30	St14 (ENSMUSG00000031995) #31	Zbtb44 (ENSMUSG00000047412) #32	Adamts8 (ENSMUSG00000031994) #33	Adamts15 (ENSMUSG00000033453) #34	Snx19 (ENSMUSG00000031993) #35	Ntm (ENSMUSG00000059974) #36	Opcml (ENSMUSG00000062257) #37
Shrew mouse	MODERN SPECIES	1	Pate3 (MGP_PahariEiJ_G0014825)	MGP_PahariEiJ_G0014824 #7	Hyls1 (MGP_PahariEiJ_G0014823) #9	Pus3 (MGP_PahariEiJ_G0014822) #10	Ddx25 (MGP_PahariEiJ_G0014821) #11	Cdon (MGP_PahariEiJ_G0014820) #12	Rpusd4 (MGP_PahariEiJ_G0014819) #13	Fam118b (MGP_PahariEiJ_G0014818) #14	Foxred1 (MGP_PahariEiJ_G0014817) #15	Srpr (MGP_PahariEiJ_G0014816) #16	Tirap (MGP_PahariEiJ_G0014815) #17	Dcps (MGP_PahariEiJ_G0014814) #18	St3gal4 (MGP_PahariEiJ_G0014813) #19	Kirrel3 (MGP_PahariEiJ_G0014812) #20	Ets1 (MGP_PahariEiJ_G0014811) #21	Fli1 (MGP_PahariEiJ_G0014810) #22	Kcnj1 (MGP_PahariEiJ_G0014809) #23	Kcnj5 (MGP_PahariEiJ_G0014808) #24	Arhgap32 (MGP_PahariEiJ_G0014807) #25	Barx2 (MGP_PahariEiJ_G0014806) #26	Tmem45b (MGP_PahariEiJ_G0014805) #27	Nfrkb (MGP_PahariEiJ_G0014804) #28	MGP_PahariEiJ_G0014803 #29	Aplp2 (MGP_PahariEiJ_G0014802) #30	St14 (MGP_PahariEiJ_G0014801) #31	MGP_PahariEiJ_G0014800 #32	Adamts8 (MGP_PahariEiJ_G0014799) #33	Adamts15 (MGP_PahariEiJ_G0014798) #34	Snx19 (MGP_PahariEiJ_G0014797) #35	Ntm (MGP_PahariEiJ_G0014796) #36	Opcml (MGP_PahariEiJ_G0014795) #37