Vertebrata	ANCESTRAL SPECIES	687															ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22
Gnathostomata	ANCESTRAL SPECIES	7											ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000177757	ENSGT00940000156397 #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33
Euteleostomi	ANCESTRAL SPECIES	30																ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Sarcopterygii	ANCESTRAL SPECIES	38												ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00530000063829.B
Tetrapoda	ANCESTRAL SPECIES	16	ENSGT00940000160676 #9	ENSGT00940000166016	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Amniota	ANCESTRAL SPECIES	25	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Mammalia	ANCESTRAL SPECIES	62	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a
Theria	ANCESTRAL SPECIES	17	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a
Primates	ANCESTRAL SPECIES	28	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Haplorrhini	ANCESTRAL SPECIES	35	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00940000155097.kb	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077.hb #30	ENSGT00940000160728 #31	ENSGT00390000010067.c #32	ENSGT00940000161356 #33	ENSGT00390000001014.n #34	ENSGT00950000182755.b.a.a.a.a.a.b.d.a
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077.hb #30	ENSGT00940000160728 #31	ENSGT00390000010067.c #32	ENSGT00940000161356 #33	ENSGT00390000001014.n #34	ENSGT00940000154251.A.a.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a
Marmoset	MODERN SPECIES	14	CHST8 (ENSCJAG00000010344) #7	PEPD (ENSCJAG00000000637) #8	CEBPG (ENSCJAG00000045796) #9	ENSCJAG00000062617 #10	SLC7A10 (ENSCJAG00000000642) #11	LRP3 (ENSCJAG00000000662) #12	WDR88 (ENSCJAG00000000669) #13	GPATCH1 (ENSCJAG00000000684) #14	RHPN2 (ENSCJAG00000000708) #15	FAAP24 (ENSCJAG00000048468) #16	CEP89 (ENSCJAG00000000731) #17	SLC7A9 (ENSCJAG00000000755) #18	TDRD12 (ENSCJAG00000000763) #19	NUDT19 (ENSCJAG00000018441) #20	RGS9BP (ENSCJAG00000075946) #21	ANKRD27 (ENSCJAG00000018416) #22	ENSCJAG00000018410 #23	DPY19L3 (ENSCJAG00000018385) #24	ZNF507 (ENSCJAG00000018378) #25	TSHZ3 (ENSCJAG00000018374) #26	ZNF536 (ENSCJAG00000018365) #27	URI1 (ENSCJAG00000001823) #28	CCNE1 (ENSCJAG00000001857) #29	C19orf12 (ENSCJAG00000086068) #30	PLEKHF1 (ENSCJAG00000001871) #31	POP4 (ENSCJAG00000046750) #32	VSTM2B (ENSCJAG00000001884) #33	ENSCJAG00000001887 #34	ENSCJAG00000085320 #35	ENSCJAG00000011613 #36	ENSCJAG00000072387 #37
Cebidae_a	ANCESTRAL SPECIES	35	ENSGT00940000154415.l	ENSGT00940000159496	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077.hb #30	ENSGT00940000160728 #31	ENSGT00390000010067.c #32	ENSGT00940000161356 #33	ENSGT00390000001014.n #34
Capuchin	MODERN SPECIES	318	ENSCCAG00000037033	KCTD15 (ENSCCAG00000025481)	CHST8 (ENSCCAG00000035748) #7	PEPD (ENSCCAG00000025441) #8	CEBPG (ENSCCAG00000008678) #9	SLC7A10 (ENSCCAG00000037990) #11	LRP3 (ENSCCAG00000028610) #12	WDR88 (ENSCCAG00000035634) #13	GPATCH1 (ENSCCAG00000024676) #14	RHPN2 (ENSCCAG00000027366) #15	FAAP24 (ENSCCAG00000037323) #16	CEP89 (ENSCCAG00000036855) #17	SLC7A9 (ENSCCAG00000036558) #18	TDRD12 (ENSCCAG00000037592) #19	NUDT19 (ENSCCAG00000028602) #20	ANKRD27 (ENSCCAG00000016931) #22	ENSCCAG00000033884 #23	DPY19L3 (ENSCCAG00000035339) #24
Bolivian squirrel monkey	MODERN SPECIES	134	LSM14A (ENSSBOG00000020141)	ENSSBOG00000032093	CHST8 (ENSSBOG00000004821) #7	PEPD (ENSSBOG00000007422) #8	CEBPG (ENSSBOG00000019291) #9	SLC7A10 (ENSSBOG00000027542) #11	LRP3 (ENSSBOG00000035415) #12	WDR88 (ENSSBOG00000025893) #13	GPATCH1 (ENSSBOG00000034650) #14	ENSSBOG00000015947	RHPN2 (ENSSBOG00000019588) #15	ENSSBOG00000032597 #16	CEP89 (ENSSBOG00000020185) #17	SLC7A9 (ENSSBOG00000026844) #18	TDRD12 (ENSSBOG00000034916) #19	ANKRD27 (ENSSBOG00000003371) #22	ENSSBOG00000031965 #23	DPY19L3 (ENSSBOG00000016884) #24	ZNF507 (ENSSBOG00000029395) #25	TSHZ3 (ENSSBOG00000026781) #26	ZNF536 (ENSSBOG00000030032) #27	URI1 (ENSSBOG00000026899) #28	CCNE1 (ENSSBOG00000028300) #29	ENSSBOG00000025647 #30	PLEKHF1 (ENSSBOG00000020039) #31	POP4 (ENSSBOG00000032445) #32	VSTM2B (ENSSBOG00000000764) #33	UQCRFS1 (ENSSBOG00000031980) ##34
Mas night monkey	MODERN SPECIES	1081	CHST8 (ENSANAG00000027943) #7	PEPD (ENSANAG00000032554) #8	ENSANAG00000031471 #9	CEBPA (ENSANAG00000019625) #10	SLC7A10 (ENSANAG00000021682) #11	LRP3 (ENSANAG00000027962) #12	WDR88 (ENSANAG00000032336) #13	GPATCH1 (ENSANAG00000027002) #14	RHPN2 (ENSANAG00000035594) #15	ENSANAG00000025099 #16	CEP89 (ENSANAG00000020648) #17	SLC7A9 (ENSANAG00000023617) #18	TDRD12 (ENSANAG00000023166) #19	NUDT19 (ENSANAG00000035514) #20	RGS9BP (ENSANAG00000034601) #21	ANKRD27 (ENSANAG00000035787) #22	ENSANAG00000030236 #23	DPY19L3 (ENSANAG00000019965) #24	ZNF507 (ENSANAG00000022070) #25	TSHZ3 (ENSANAG00000003355) #26	ZNF536 (ENSANAG00000022858) #27	ENSANAG00000022926	URI1 (ENSANAG00000030437) #28	ENSANAG00000020114 #29	ENSANAG00000020400 #30	PLEKHF1 (ENSANAG00000031611) #31	POP4 (ENSANAG00000020295) #32	VSTM2B (ENSANAG00000011934) #33	ENSANAG00000026070 #34	ENSANAG00000024673	ENSANAG00000021197
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000154940.qb
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000159345.o
Hominidae	ANCESTRAL SPECIES		ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000159345.o
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000153272.a.b.p	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b.u.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00940000155097.w.a	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000159345.o
Gorilla	MODERN SPECIES	10	PEPD (ENSGGOG00000012143) #8	CEBPG (ENSGGOG00000041030) #9	ENSGGOG00000036528	ENSGGOG00000039590 #10	SLC7A10 (ENSGGOG00000006085) #11	LRP3 (ENSGGOG00000006079) #12	WDR88 (ENSGGOG00000009952) #13	GPATCH1 (ENSGGOG00000010862) #14	ENSGGOG00000013137 #15	ENSGGOG00000042319 #16	CEP89 (ENSGGOG00000014134) #17	SLC7A9 (ENSGGOG00000011960) #18	TDRD12 (ENSGGOG00000011938) #19	NUDT19 (ENSGGOG00000007785) #20	RGS9BP (ENSGGOG00000043355) #21	ANKRD27 (ENSGGOG00000008596) #22	ENSGGOG00000006169 #23	DPY19L3 (ENSGGOG00000009160) #24	ZNF507 (ENSGGOG00000010501) #25	ENSGGOG00000043441	ENSGGOG00000041898	TSHZ3 (ENSGGOG00000003676) #26	ZNF536 (ENSGGOG00000013640) #27	ENSGGOG00000025255	URI1 (ENSGGOG00000005886) #28	ENSGGOG00000037265	CCNE1 (ENSGGOG00000008452) #29	C19orf12 (ENSGGOG00000014142) #30	PLEKHF1 (ENSGGOG00000001698) #31	VSTM2B (ENSGGOG00000009691) #33	UQCRFS1 (ENSGGOG00000012978) #34
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000153272.a.b.p	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b.u.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00940000155097.w.a	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000159345.o
Human	MODERN SPECIES	10	CHST8 (ENSG00000124302) #7	PEPD (ENSG00000124299) #8	CEBPG (ENSG00000153879) #9	CEBPA (ENSG00000245848) #10	SLC7A10 (ENSG00000130876) #11	LRP3 (ENSG00000130881) #12	WDR88 (ENSG00000166359) #13	GPATCH1 (ENSG00000076650) #14	RHPN2 (ENSG00000131941) #15	FAAP24 (ENSG00000131944) #16	CEP89 (ENSG00000121289) #17	SLC7A9 (ENSG00000021488) #18	TDRD12 (ENSG00000173809) #19	NUDT19 (ENSG00000213965) #20	RGS9BP (ENSG00000186326) #21	ANKRD27 (ENSG00000105186) #22	PDCD5 (ENSG00000105185) #23	DPY19L3 (ENSG00000178904) #24	ZNF507 (ENSG00000168813) #25	TSHZ3 (ENSG00000121297) #26	ZNF536 (ENSG00000198597) #27	URI1 (ENSG00000105176) #28	CCNE1 (ENSG00000105173) #29	C19orf12 (ENSG00000131943) #30	PLEKHF1 (ENSG00000166289) #31	POP4 (ENSG00000105171) #32	VSTM2B (ENSG00000187135) #33	UQCRFS1 (ENSG00000169021) #34	ZNF254 (ENSG00000213096)	ZNF726 (ENSG00000213967)	RPSA2 (ENSG00000288920)
Pan	ANCESTRAL SPECIES	32	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000153272.a.b.p	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b.u.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00940000155097.w.a	ENSGT00390000002362.m #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000159345.o
Chimpanzee	MODERN SPECIES	10	CHST8 (ENSPTRG00000010810) #7	PEPD (ENSPTRG00000010809) #8	CEBPG (ENSPTRG00000046009) #9	ENSPTRG00000042479	SLC7A10 (ENSPTRG00000010807) #11	LRP3 (ENSPTRG00000010806) #12	WDR88 (ENSPTRG00000010804) #13	GPATCH1 (ENSPTRG00000010803) #14	RHPN2 (ENSPTRG00000010801) #15	FAAP24 (ENSPTRG00000010798) #16	CEP89 (ENSPTRG00000010797) #17	SLC7A9 (ENSPTRG00000010796) #18	TDRD12 (ENSPTRG00000010795) #19	NUDT19 (ENSPTRG00000034496) #20	RGS9BP (ENSPTRG00000047454) #21	ANKRD27 (ENSPTRG00000010792) #22	PDCD5 (ENSPTRG00000010791) #23	DPY19L3 (ENSPTRG00000010790) #24	ZNF507 (ENSPTRG00000010789) #25	ENSPTRG00000048388	TSHZ3 (ENSPTRG00000010788) #26	ZNF536 (ENSPTRG00000010786) #27	ENSPTRG00000052821	ENSPTRG00000050716	URI1 (ENSPTRG00000010784) #28	CCNE1 (ENSPTRG00000010782) #29	C19H19orf12 (ENSPTRG00000010781) #30	PLEKHF1 (ENSPTRG00000010780) #31	POP4 (ENSPTRG00000010779) #32	VSTM2B (ENSPTRG00000010778) #33	UQCRFS1 (ENSPTRG00000010777) #34
Bonobo	MODERN SPECIES	10	PEPD (ENSPPAG00000028422) #8	CEBPG (ENSPPAG00000024897) #9	ENSPPAG00000034757	ENSPPAG00000014349 #10	SLC7A10 (ENSPPAG00000029338) #11	LRP3 (ENSPPAG00000036881) #12	WDR88 (ENSPPAG00000033383) #13	GPATCH1 (ENSPPAG00000020990) #14	RHPN2 (ENSPPAG00000039976) #15	FAAP24 (ENSPPAG00000031426) #16	CEP89 (ENSPPAG00000030028) #17	SLC7A9 (ENSPPAG00000040321) #18	TDRD12 (ENSPPAG00000042284) #19	ENSPPAG00000034507 #20	RGS9BP (ENSPPAG00000013767) #21	ANKRD27 (ENSPPAG00000035637) #22	ENSPPAG00000042320 #23	DPY19L3 (ENSPPAG00000028384) #24	ZNF507 (ENSPPAG00000042851) #25	TSHZ3 (ENSPPAG00000036336) #26	ZNF536 (ENSPPAG00000034794) #27	ENSPPAG00000037943	ENSPPAG00000032180 #28	CCNE1 (ENSPPAG00000039579) #29	C19orf12 (ENSPPAG00000029958) #30	ENSPPAG00000030231 #31	POP4 (ENSPPAG00000040372) #32	VSTM2B (ENSPPAG00000031848) #33	UQCRFS1 (ENSPPAG00000029945) #34	ENSPPAG00000042511	ENSPPAG00000030126
Orangutan	MODERN SPECIES	10	CHST8 (ENSPPYG00000010593) #7	PEPD (ENSPPYG00000009829) #8	CEBPG (ENSPPYG00000009828) #9	CEBPA (ENSPPYG00000032021) #10	SLC7A10 (ENSPPYG00000009827) #11	LRP3 (ENSPPYG00000009826) #12	WDR88 (ENSPPYG00000009825) #13	GPATCH1 (ENSPPYG00000009824) #14	RHPN2 (ENSPPYG00000009823) #15	FAAP24 (ENSPPYG00000033989) #16	CEP89 (ENSPPYG00000032385) #17	SLC7A9 (ENSPPYG00000009822) #18	TDRD12 (ENSPPYG00000009821) #19	NUDT19 (ENSPPYG00000035150) #20	RGS9BP (ENSPPYG00000009819) #21	ANKRD27 (ENSPPYG00000009818) #22	PDCD5 (ENSPPYG00000009817) #23	DPY19L3 (ENSPPYG00000009816) #24	ZNF507 (ENSPPYG00000010581) #25	ENSPPYG00000031432	ENSPPYG00000030609	ZNF536 (ENSPPYG00000009811) #27	ENSPPYG00000009810 #28	CCNE1 (ENSPPYG00000009808) #29	PLEKHF1 (ENSPPYG00000009806) #31	POP4 (ENSPPYG00000009805) #32	VSTM2B (ENSPPYG00000010594) #33	UQCRFS1 (ENSPPYG00000038537) #34	ENSPPYG00000009802	ZNF681 (ENSPPYG00000038706)	ENSPPYG00000030635
Gibbon	MODERN SPECIES		CHST8 (ENSNLEG00000011703) #7	PEPD (ENSNLEG00000007701) #8	CEBPG (ENSNLEG00000029852) #9	SLC7A10 (ENSNLEG00000007686) #11	LRP3 (ENSNLEG00000007676) #12	ENSNLEG00000035651 #13	GPATCH1 (ENSNLEG00000007659) #14	ENSNLEG00000030362 #15	ENSNLEG00000007654 #16	ENSNLEG00000033704	CEP89 (ENSNLEG00000007643) #17	SLC7A9 (ENSNLEG00000007638) #18	ENSNLEG00000007635 #19	NUDT19 (ENSNLEG00000007633) #20	RGS9BP (ENSNLEG00000033989) #21	ANKRD27 (ENSNLEG00000007615) #22	ENSNLEG00000033870 #23	DPY19L3 (ENSNLEG00000007610) #24	ENSNLEG00000007609	TSHZ3 (ENSNLEG00000007608) #26	ZNF536 (ENSNLEG00000007605) #27	ENSNLEG00000007600 #28	ENSNLEG00000032007	CCNE1 (ENSNLEG00000007599) #29	ENSNLEG00000033714 #30	PLEKHF1 (ENSNLEG00000034434) #31	ENSNLEG00000028526	VSTM2B (ENSNLEG00000007593) #33	UQCRFS1 (ENSNLEG00000007588) #34	ENSNLEG00000030634	ZNF254 (ENSNLEG00000034962)
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000154940.qb
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000161942.a.a.a.a.b.e.b
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469.g.b #11	ENSGT00940000153272.a.b.p	ENSGT00940000156469.h #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000153236.b.b.b.a.a.b.a.a
Cercopithecinae_b	ANCESTRAL SPECIES	24	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469.g.b #11	ENSGT00940000153272.a.b.p	ENSGT00940000156469.h #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Olive baboon	MODERN SPECIES	12	CHST8 (ENSPANG00000000268) #7	PEPD (ENSPANG00000000267) #8	CEBPG (ENSPANG00000016413) #9	CEBPA (ENSPANG00000043187) #10	SLC7A10 (ENSPANG00000005447) #11	LRP3 (ENSPANG00000018901) #12	WDR88 (ENSPANG00000010853) #13	GPATCH1 (ENSPANG00000012374) #14	RHPN2 (ENSPANG00000017034) #15	FAAP24 (ENSPANG00000024282) #16	CEP89 (ENSPANG00000003158) #17	SLC7A9 (ENSPANG00000001204) #18	TDRD12 (ENSPANG00000001203) #19	NUDT19 (ENSPANG00000011363) #20	RGS9BP (ENSPANG00000004020) #21	ANKRD27 (ENSPANG00000030136) #22	PDCD5 (ENSPANG00000013640) #23	DPY19L3 (ENSPANG00000010375) #24	ZNF507 (ENSPANG00000010840) #25	TSHZ3 (ENSPANG00000001076) #26	ZNF536 (ENSPANG00000016643) #27	URI1 (ENSPANG00000010974) #28	CCNE1 (ENSPANG00000017035) #29	ENSPANG00000007899 #30	PLEKHF1 (ENSPANG00000013107) #31	POP4 (ENSPANG00000008546) #32	VSTM2B (ENSPANG00000013391) #33	UQCRFS1 (ENSPANG00000024986) #34	ENSPANG00000048435	ENSPANG00000017544	ENSPANG00000026433
Cercopithecinae_d	ANCESTRAL SPECIES	26	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000153272.a.b.p	ENSGT00940000156469.h #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Sooty mangabey	MODERN SPECIES	535	CHST8 (ENSCATG00000039785) #7	PEPD (ENSCATG00000039981) #8	CEBPG (ENSCATG00000018455) #9	ENSCATG00000038303	SLC7A10 (ENSCATG00000030571) #11	LRP3 (ENSCATG00000033824) #12	WDR88 (ENSCATG00000037627) #13	GPATCH1 (ENSCATG00000043637) #14	RHPN2 (ENSCATG00000028263) #15	FAAP24 (ENSCATG00000037414) #16	CEP89 (ENSCATG00000032749) #17	SLC7A9 (ENSCATG00000032830) #18	TDRD12 (ENSCATG00000038627) #19	NUDT19 (ENSCATG00000034824) #20	RGS9BP (ENSCATG00000000718) #21	ANKRD27 (ENSCATG00000039085) #22	PDCD5 (ENSCATG00000032551) #23	DPY19L3 (ENSCATG00000040765) #24	ZNF507 (ENSCATG00000032058) #25	TSHZ3 (ENSCATG00000027617) #26	ZNF536 (ENSCATG00000038060) #27	ENSCATG00000044280	URI1 (ENSCATG00000041548) #28	CCNE1 (ENSCATG00000036730) #29	C19orf12 (ENSCATG00000043372) #30	PLEKHF1 (ENSCATG00000017587) #31	POP4 (ENSCATG00000036022) #32	VSTM2B (ENSCATG00000041422) #33	UQCRFS1 (ENSCATG00000037427) #34
Drill	MODERN SPECIES	1167				PEPD (ENSMLEG00000039945) #8	CEBPG (ENSMLEG00000010213) #9	ENSMLEG00000035146	SLC7A10 (ENSMLEG00000037857) #11	LRP3 (ENSMLEG00000042731) #12	WDR88 (ENSMLEG00000040613) #13	GPATCH1 (ENSMLEG00000043840) #14	RHPN2 (ENSMLEG00000031393) #15	FAAP24 (ENSMLEG00000034497) #16	CEP89 (ENSMLEG00000042877) #17	SLC7A9 (ENSMLEG00000034139) #18	TDRD12 (ENSMLEG00000042036) #19	ANKRD27 (ENSMLEG00000035681) #22	PDCD5 (ENSMLEG00000034452) #23	DPY19L3 (ENSMLEG00000041227) #24	ZNF507 (ENSMLEG00000043374) #25	ENSMLEG00000034458	TSHZ3 (ENSMLEG00000001629) #26	ZNF536 (ENSMLEG00000040359) #27	ENSMLEG00000042025	URI1 (ENSMLEG00000042881) #28	CCNE1 (ENSMLEG00000039590) #29	C19orf12 (ENSMLEG00000037130) #30	PLEKHF1 (ENSMLEG00000019239) #31	POP4 (ENSMLEG00000043454) #32	VSTM2B (ENSMLEG00000037367) #33	UQCRFS1 (ENSMLEG00000037838) #34
Macaca	ANCESTRAL SPECIES	12	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469.g.a #11	ENSGT00940000156469.h #11	ENSGT00940000160021 #12	ENSGT00940000162291.d #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362.i.a #28	ENSGT00390000002362.j #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.h #34	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000154915.j
Pig-tailed macaque	MODERN SPECIES	218	ENSMNEG00000028924	ENSMNEG00000043755	CHST8 (ENSMNEG00000034130) #7	PEPD (ENSMNEG00000042698) #8	CEBPG (ENSMNEG00000026159) #9	SLC7A10 (ENSMNEG00000037424) #11	LRP3 (ENSMNEG00000024475) #12	WDR88 (ENSMNEG00000029027) #13	GPATCH1 (ENSMNEG00000045084) #14	RHPN2 (ENSMNEG00000032814) #15	FAAP24 (ENSMNEG00000016780) #16	CEP89 (ENSMNEG00000034589) #17	TDRD12 (ENSMNEG00000043067) #19	NUDT19 (ENSMNEG00000044868) #20	RGS9BP (ENSMNEG00000014719) #21	ANKRD27 (ENSMNEG00000042970) #22	PDCD5 (ENSMNEG00000033071) #23	DPY19L3 (ENSMNEG00000006138) #24	ZNF507 (ENSMNEG00000028743) #25	TSHZ3 (ENSMNEG00000033088) #26	ZNF536 (ENSMNEG00000036995) #27	ENSMNEG00000008907	ENSMNEG00000039852 #28
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000156469.g.a #11	ENSGT00940000162291.c #13	ENSGT00940000156469.h #11	ENSGT00940000160021 #12	ENSGT00960000190924	ENSGT00940000156469.g.b #11	ENSGT00940000162291.d #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT01100000263493.a.a.a.b.b.b.b.a.b.b.b.b	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362.i.a #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.h #34	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000154915.j
Rhesus	MODERN SPECIES	10	KCTD15 (ENSMMUG00000011319)	CHST8 (ENSMMUG00000018024) #7	PEPD (ENSMMUG00000006128) #8	CEBPG (ENSMMUG00000062413) #9	SLC7A10 (ENSMMUG00000022875) #11	LRP3 (ENSMMUG00000022872) #12	ENSMMUG00000064983	GPATCH1 (ENSMMUG00000011790) #14	RHPN2 (ENSMMUG00000028798) #15	FAAP24 (ENSMMUG00000017939) #16	CEP89 (ENSMMUG00000018351) #17	SLC7A9 (ENSMMUG00000028800) #18	TDRD12 (ENSMMUG00000015608)	RGS9BP (ENSMMUG00000046695) #21	ENSMMUG00000062732	ANKRD27 (ENSMMUG00000008041) #22	PDCD5 (ENSMMUG00000052666) #23	DPY19L3 (ENSMMUG00000010842) #24	ZNF507 (ENSMMUG00000010840) #25	ENSMMUG00000060263	TSHZ3 (ENSMMUG00000014028) #26	ZNF536 (ENSMMUG00000063586) #27	ENSMMUG00000058273	URI1 (ENSMMUG00000018441) #28	CCNE1 (ENSMMUG00000020668) #29	C19H19orf12 (ENSMMUG00000021690) #30	PLEKHF1 (ENSMMUG00000011373) #31	POP4 (ENSMMUG00000017424) #32	VSTM2B (ENSMMUG00000007392) #33	ENSMMUG00000008417 #34	ENSMMUG00000012013
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000043393	CHST8 (ENSMFAG00000031076) #7	PEPD (ENSMFAG00000034452) #8	CEBPG (ENSMFAG00000054581) #9	CEBPA (ENSMFAG00000059502) #10	ENSMFAG00000041307 #11	ENSMFAG00000063532 #13	GPATCH1 (ENSMFAG00000034418) #14	RHPN2 (ENSMFAG00000043323) #15	FAAP24 (ENSMFAG00000054473) #16	CEP89 (ENSMFAG00000001684) #17	SLC7A9 (ENSMFAG00000002286) #18	TDRD12 (ENSMFAG00000044756) #19	ENSMFAG00000059021	NUDT19 (ENSMFAG00000042477) #20	ANKRD27 (ENSMFAG00000030329) #22	ENSMFAG00000051717	PDCD5 (ENSMFAG00000044379) #23	DPY19L3 (ENSMFAG00000043628) #24	ZNF507 (ENSMFAG00000031054) #25	ENSMFAG00000064547	TSHZ3 (ENSMFAG00000033604) #26	ENSMFAG00000058928	ZNF536 (ENSMFAG00000042864) #27	URI1 (ENSMFAG00000044813) #28	CCNE1 (ENSMFAG00000041278) #29	C19orf12 (ENSMFAG00000037046) #30	ENSMFAG00000056289	POP4 (ENSMFAG00000029606) #32	VSTM2B (ENSMFAG00000048636) #33	ENSMFAG00000060436 #34
Vervet Monkey	MODERN SPECIES	25	CHST8 (ENSCSAG00000004673) #7	PEPD (ENSCSAG00000004677) #8	CEBPG (ENSCSAG00000018517) #9	CEBPA (ENSCSAG00000018515) #10	SLC7A10 (ENSCSAG00000004683) #11	LRP3 (ENSCSAG00000004689) #12	WDR88 (ENSCSAG00000004701) #13	GPATCH1 (ENSCSAG00000004743) #14	RHPN2 (ENSCSAG00000004761) #15	FAAP24 (ENSCSAG00000004765) #16	CEP89 (ENSCSAG00000004771) #17	SLC7A9 (ENSCSAG00000004775) #18	TDRD12 (ENSCSAG00000004794) #19	NUDT19 (ENSCSAG00000004800) #20	RGS9BP (ENSCSAG00000018513) #21	ANKRD27 (ENSCSAG00000004811) #22	PDCD5 (ENSCSAG00000004815) #23	DPY19L3 (ENSCSAG00000004818) #24	ZNF507 (ENSCSAG00000004822) #25	ENSCSAG00000004823	TSHZ3 (ENSCSAG00000018510) #26	ZNF536 (ENSCSAG00000004832) #27	URI1 (ENSCSAG00000004838) #28	CCNE1 (ENSCSAG00000004850) #29	C19orf12 (ENSCSAG00000004862) #30	PLEKHF1 (ENSCSAG00000018508) #31	POP4 (ENSCSAG00000004868) #32	VSTM2B (ENSCSAG00000004872) #33	UQCRFS1 (ENSCSAG00000004876) #34	ENSCSAG00000004890	ENSCSAG00000004895
Rhinopithecus	ANCESTRAL SPECIES	33	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00960000190924	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00390000016889	ENSGT00940000155199.lb	ENSGT00940000154563.r	ENSGT00940000160784	ENSGT00940000163962	ENSGT00390000009310.j.a.a	ENSGT01050000244900.a.a.a.a.a	ENSGT00950000182959.a.b.b.b	ENSGT01030000234555.a.a.b.a.a	ENSGT00940000158040	ENSGT00940000161815	ENSGT00940000161149	ENSGT00950000182952.B	ENSGT00940000157007
Golden snub-nosed monkey	MODERN SPECIES	1310							ENSRROG00000034106	GPATCH1 (ENSRROG00000024428) #14	RHPN2 (ENSRROG00000004964) #15	FAAP24 (ENSRROG00000013872) #16	CEP89 (ENSRROG00000032795) #17	SLC7A9 (ENSRROG00000036350) #18	TDRD12 (ENSRROG00000036351) #19	NUDT19 (ENSRROG00000015974) #20	RGS9BP (ENSRROG00000028659) #21	ANKRD27 (ENSRROG00000041481) #22	ENSRROG00000040094 #23	ENSRROG00000005524
Black snub-nosed monkey	MODERN SPECIES	2231												CEP89 (ENSRBIG00000042857) #17	SLC7A9 (ENSRBIG00000033770) #18	TDRD12 (ENSRBIG00000019899) #19	RGS9BP (ENSRBIG00000017839) #21	ANKRD27 (ENSRBIG00000043759) #22	ENSRBIG00000035785 #23
Tarsier	MODERN SPECIES	6426																ANKRD27 (ENSTSYG00000009758) #22	PDCD5 (ENSTSYG00000006452) #23	DPY19L3 (ENSTSYG00000013262) #24	ZNF507 (ENSTSYG00000005934) #25
Strepsirrhini	ANCESTRAL SPECIES	36	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Lemuriformes	ANCESTRAL SPECIES	29	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	14	CHST8 (ENSMICG00000044697) #7	PEPD (ENSMICG00000013428) #8	CEBPG (ENSMICG00000045141) #9	CEBPA (ENSMICG00000029472) #10	SLC7A10 (ENSMICG00000045526) #11	LRP3 (ENSMICG00000032993) #12	WDR88 (ENSMICG00000017262) #13	GPATCH1 (ENSMICG00000004829) #14	ENSMICG00000028269	RHPN2 (ENSMICG00000003663) #15	FAAP24 (ENSMICG00000044088) #16	CEP89 (ENSMICG00000003646) #17	SLC7A9 (ENSMICG00000046921) #18	TDRD12 (ENSMICG00000003623) #19	NUDT19 (ENSMICG00000037570) #20	ENSMICG00000000420 #22	ENSMICG00000041547 #22	PDCD5 (ENSMICG00000000417) #23	DPY19L3 (ENSMICG00000012369) #24	ZNF507 (ENSMICG00000012333) #25	TSHZ3 (ENSMICG00000027677) #26	ZNF536 (ENSMICG00000035640) #27	URI1 (ENSMICG00000006756) #28	ENSMICG00000036638	CCNE1 (ENSMICG00000006777) #29	C19orf12 (ENSMICG00000046460) #30	PLEKHF1 (ENSMICG00000015447) #31	POP4 (ENSMICG00000035730) #32	VSTM2B (ENSMICG00000044409) #33	UQCRFS1 (ENSMICG00000027906) #34
Mouse lemur	MODERN SPECIES	14	PEPD (ENSMICG00000013428) #8	CEBPG (ENSMICG00000045141) #9	CEBPA (ENSMICG00000029472) #10	SLC7A10 (ENSMICG00000045526) #11	LRP3 (ENSMICG00000032993) #12	WDR88 (ENSMICG00000017262) #13	GPATCH1 (ENSMICG00000004829) #14	ENSMICG00000028269	RHPN2 (ENSMICG00000003663) #15	FAAP24 (ENSMICG00000044088) #16	CEP89 (ENSMICG00000003646) #17	SLC7A9 (ENSMICG00000046921) #18	TDRD12 (ENSMICG00000003623) #19	NUDT19 (ENSMICG00000037570) #20	ENSMICG00000000420 #22	ENSMICG00000041547 #22	PDCD5 (ENSMICG00000000417) #23	DPY19L3 (ENSMICG00000012369) #24	ZNF507 (ENSMICG00000012333) #25	TSHZ3 (ENSMICG00000027677) #26	ZNF536 (ENSMICG00000035640) #27	URI1 (ENSMICG00000006756) #28	ENSMICG00000036638	CCNE1 (ENSMICG00000006777) #29	C19orf12 (ENSMICG00000046460) #30	PLEKHF1 (ENSMICG00000015447) #31	POP4 (ENSMICG00000035730) #32	VSTM2B (ENSMICG00000044409) #33	UQCRFS1 (ENSMICG00000027906) #34
Lemuriformes_a	ANCESTRAL SPECIES	158		ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Greater bamboo lemur	MODERN SPECIES	775				SLC7A10 (ENSPSMG00000014871) #11	LRP3 (ENSPSMG00000014886) #12	WDR88 (ENSPSMG00000014901) #13	GPATCH1 (ENSPSMG00000014950) #14	RHPN2 (ENSPSMG00000014984) #15	FAAP24 (ENSPSMG00000014997) #16	CEP89 (ENSPSMG00000015002) #17	SLC7A9 (ENSPSMG00000015023) #18	TDRD12 (ENSPSMG00000015114) #19	NUDT19 (ENSPSMG00000015148) #20	ENSPSMG00000015151	RGS9BP (ENSPSMG00000015153) #21	ANKRD27 (ENSPSMG00000015253) #22	ENSPSMG00000015281	PDCD5 (ENSPSMG00000015313) #23	DPY19L3 (ENSPSMG00000015366) #24	ZNF507 (ENSPSMG00000015392) #25	TSHZ3 (ENSPSMG00000015407) #26	ENSPSMG00000015427	ZNF536 (ENSPSMG00000015452) #27	URI1 (ENSPSMG00000015493) #28	CCNE1 (ENSPSMG00000015575) #29
Coquerels sifaka	MODERN SPECIES	363					CEBPG (ENSPCOG00000025828) #9	SLC7A10 (ENSPCOG00000008563) #11	LRP3 (ENSPCOG00000021536) #12	WDR88 (ENSPCOG00000025378) #13	GPATCH1 (ENSPCOG00000009674) #14	RHPN2 (ENSPCOG00000016163) #15	FAAP24 (ENSPCOG00000020206) #16	CEP89 (ENSPCOG00000009646) #17	ENSPCOG00000011220	SLC7A9 (ENSPCOG00000026968) #18	TDRD12 (ENSPCOG00000023600) #19	ANKRD27 (ENSPCOG00000013416) #22	ENSPCOG00000017218 #23	DPY19L3 (ENSPCOG00000016162) #24	ZNF507 (ENSPCOG00000017580) #25	TSHZ3 (ENSPCOG00000023437) #26	ZNF536 (ENSPCOG00000017326) #27	URI1 (ENSPCOG00000019426) #28	CCNE1 (ENSPCOG00000000361) #29	C19orf12 (ENSPCOG00000002733) #30	POP4 (ENSPCOG00000018055) #32	VSTM2B (ENSPCOG00000015905) #33	UQCRFS1 (ENSPCOG00000015205) #34
Bushbaby	MODERN SPECIES	250	CHST8 (ENSOGAG00000025594) #7	PEPD (ENSOGAG00000010439) #8	CEBPG (ENSOGAG00000010436) #9	CEBPA (ENSOGAG00000024661) #10	SLC7A10 (ENSOGAG00000029800) #11	LRP3 (ENSOGAG00000034429) #12	WDR88 (ENSOGAG00000004017) #13	GPATCH1 (ENSOGAG00000004016) #14	RHPN2 (ENSOGAG00000001578) #15	FAAP24 (ENSOGAG00000001576) #16	CEP89 (ENSOGAG00000001573) #17	SLC7A9 (ENSOGAG00000012118) #18	TDRD12 (ENSOGAG00000001571) #19	NUDT19 (ENSOGAG00000026276) #20	RGS9BP (ENSOGAG00000032941) #21	ANKRD27 (ENSOGAG00000015112) #22	PDCD5 (ENSOGAG00000025274) #23	ENSOGAG00000033236	DPY19L3 (ENSOGAG00000002677) #24	ZNF507 (ENSOGAG00000002674) #25	TSHZ3 (ENSOGAG00000032636) #26	ZNF536 (ENSOGAG00000003997) #27	URI1 (ENSOGAG00000015310) #28	ENSOGAG00000025344	CCNE1 (ENSOGAG00000006217) #29	C19orf12 (ENSOGAG00000012719) #30	PLEKHF1 (ENSOGAG00000033399) #31	POP4 (ENSOGAG00000011168) #32	VSTM2B (ENSOGAG00000029203) #33	UQCRFS1 (ENSOGAG00000026492) #34
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Tree shrew	MODERN SPECIES	3264																ENSTBEG00000010068 #22
Glires	ANCESTRAL SPECIES	6	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33
Muroidea	ANCESTRAL SPECIES	18	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00390000014208	ENSGT00940000161356 #33	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Cricetidae	ANCESTRAL SPECIES	26	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00960000190924	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00390000014208	ENSGT00940000161356 #33	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Cricetidae_B	ANCESTRAL SPECIES	25	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00960000190924	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00390000014208	ENSGT00940000161356 #33	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Northern American deer mouse	MODERN SPECIES		Pepd (ENSPEMG00000021596) #8	Cebpg (ENSPEMG00000002139) #9	ENSPEMG00000020956 #10	Slc7a10 (ENSPEMG00000007269) #11	Lrp3 (ENSPEMG00000000320) #12	ENSPEMG00000024856	Gpatch1 (ENSPEMG00000000636) #14	Rhpn2 (ENSPEMG00000020482) #15	Faap24 (ENSPEMG00000021083) #16	Cep89 (ENSPEMG00000020557) #17	Slc7a9 (ENSPEMG00000020346) #18	Tdrd12 (ENSPEMG00000009233) #19	ENSPEMG00000022578	Nudt19 (ENSPEMG00000020519) #20	Rgs9bp (ENSPEMG00000001852) #21	Ankrd27 (ENSPEMG00000020526) #22	Pdcd5 (ENSPEMG00000005766) #23	Dpy19l3 (ENSPEMG00000020636) #24	Zfp507 (ENSPEMG00000023579) #25	Tshz3 (ENSPEMG00000024219) #26	Zfp536 (ENSPEMG00000014198) #27	Uri1 (ENSPEMG00000021114) #28	Ccne1 (ENSPEMG00000020299) #29	1600014C10Rik (ENSPEMG00000030733) #30	ENSPEMG00000014034 #32	ENSPEMG00000026755	ENSPEMG00000019774	ENSPEMG00000026788	Vstm2b (ENSPEMG00000021557) #33	ENSPEMG00000024496	Zfp619 (ENSPEMG00000021007)
Prairie vole	MODERN SPECIES	115	Kctd15 (ENSMOCG00000007238)	Chst8 (ENSMOCG00000016140) #7	Pepd (ENSMOCG00000014173) #8	Cebpg (ENSMOCG00000008611) #9	ENSMOCG00000001852	Slc7a10 (ENSMOCG00000020699) #11	Lrp3 (ENSMOCG00000007412) #12	Gpatch1 (ENSMOCG00000000174) #14	Rhpn2 (ENSMOCG00000015268) #15	Faap24 (ENSMOCG00000017357) #16	Cep89 (ENSMOCG00000000261) #17	Slc7a9 (ENSMOCG00000001789) #18	Tdrd12 (ENSMOCG00000002366) #19	Nudt19 (ENSMOCG00000017828) #20	Rgs9bp (ENSMOCG00000002309) #21	Ankrd27 (ENSMOCG00000013668) #22	ENSMOCG00000016930 #23	Dpy19l3 (ENSMOCG00000009571) #24	Zfp507 (ENSMOCG00000017422) #25	ENSMOCG00000015706	Tshz3 (ENSMOCG00000012794) #26	Zfp536 (ENSMOCG00000011684) #27	Uri1 (ENSMOCG00000018448) #28	Ccne1 (ENSMOCG00000008837) #29	1600014C10Rik (ENSMOCG00000007337) #30	Plekhf1 (ENSMOCG00000017276) #31
Cricetinae	ANCESTRAL SPECIES	39	ENSGT00940000159496	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32
Chinese hamster chok1gshd	MODERN SPECIES	282	Kctd15 (ENSCGRG00001010841)	Chst8 (ENSCGRG00001001826) #7	Pepd (ENSCGRG00001000455) #8	Cebpg (ENSCGRG00001013623) #9	Cebpa (ENSCGRG00001017833) #10	Slc7a10 (ENSCGRG00001006085) #11	Lrp3 (ENSCGRG00001000089) #12	Gpatch1 (ENSCGRG00001016736) #14	Rhpn2 (ENSCGRG00001013772) #15	Faap24 (ENSCGRG00001012863) #16	ENSCGRG00001000081	Slc7a9 (ENSCGRG00001005745) #18	Tdrd12 (ENSCGRG00001021407) #19	Nudt19 (ENSCGRG00001017272) #20	Rgs9bp (ENSCGRG00001006642) #21	Ankrd27 (ENSCGRG00001018594) #22	ENSCGRG00001016049 #23	ENSCGRG00001014250	Dpy19l3 (ENSCGRG00001022217) #24	Zfp507 (ENSCGRG00001020787) #25	Tshz3 (ENSCGRG00001015566) #26	Zfp536 (ENSCGRG00001014547) #27	Uri1 (ENSCGRG00001019892) #28	Ccne1 (ENSCGRG00001015867) #29	1600014C10Rik (ENSCGRG00001014004) #30	Plekhf1 (ENSCGRG00001014179) #31	ENSCGRG00001012663	ENSCGRG00001013673
Golden Hamster	MODERN SPECIES	734	Lsm14a (ENSMAUG00000011145)	Kctd15 (ENSMAUG00000019883)	Chst8 (ENSMAUG00000006413) #7	Pepd (ENSMAUG00000012230) #8	Cebpg (ENSMAUG00000007633) #9	Cebpa (ENSMAUG00000003660) #10	Slc7a10 (ENSMAUG00000007653) #11	Lrp3 (ENSMAUG00000022101) #12	Rhpn2 (ENSMAUG00000002669) #15	Faap24 (ENSMAUG00000015057) #16	Cep89 (ENSMAUG00000010643) #17	Slc7a9 (ENSMAUG00000016182) #18	Tdrd12 (ENSMAUG00000013767) #19	Nudt19 (ENSMAUG00000012791) #20	Rgs9bp (ENSMAUG00000010703) #21	Ankrd27 (ENSMAUG00000006822) #22	Dpy19l3 (ENSMAUG00000013178) #24	Zfp507 (ENSMAUG00000014669) #25	Zfp536 (ENSMAUG00000016748) #27	ENSMAUG00000020272 #28	Ccne1 (ENSMAUG00000003256) #29	1600014C10Rik (ENSMAUG00000011583) #30	ENSMAUG00000006470	Plekhf1 (ENSMAUG00000021194) #31	Pop4 (ENSMAUG00000020110) #32
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00390000014208.y.b
Mus	ANCESTRAL SPECIES		ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00390000014208.y.b	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356 #33	ENSGT00390000014208.z	ENSGT00390000014208.y.a
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728.e #31	ENSGT00390000010067 #32	ENSGT00390000014208.y.b	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356 #33	ENSGT00390000014208.z	ENSGT00390000014208.y.a
Mus_B	ANCESTRAL SPECIES		ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728.e #31	ENSGT00390000010067 #32	ENSGT00390000014208.y.b.a	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356 #33	ENSGT00390000014208.z	ENSGT00390000014208.y.a.a.a
Mouse	MODERN SPECIES	16	Chst8 (ENSMUSG00000060402) #7	Pepd (ENSMUSG00000063931) #8	Cebpg (ENSMUSG00000056216) #9	Cebpa (ENSMUSG00000034957) #10	Slc7a10 (ENSMUSG00000030495) #11	Lrp3 (ENSMUSG00000001802) #12	Wdr88 (ENSMUSG00000118454) #13	Gpatch1 (ENSMUSG00000063808) #14	Rhpn2 (ENSMUSG00000030494) #15	Faap24 (ENSMUSG00000030493) #16	Cep89 (ENSMUSG00000023072) #17	Slc7a9 (ENSMUSG00000030492) #18	Tdrd12 (ENSMUSG00000030491) #19	Nudt19 (ENSMUSG00000034875) #20	Rgs9bp (ENSMUSG00000056043) #21	Ankrd27 (ENSMUSG00000034867) #22	Pdcd5 (ENSMUSG00000030417) #23	Dpy19l3 (ENSMUSG00000043671) #24	Zfp507 (ENSMUSG00000044452) #25	Tshz3 (ENSMUSG00000021217) #26	Zfp536 (ENSMUSG00000043456) #27	Uri1 (ENSMUSG00000030421) #28	Ccne1 (ENSMUSG00000002068) #29	1600014C10Rik (ENSMUSG00000054676) #30	Plekhf1 (ENSMUSG00000074170) #31	Pop4 (ENSMUSG00000030423) #32	Gm5591 (ENSMUSG00000060565)	Gm5114 (ENSMUSG00000053742)	Zfp619 (ENSMUSG00000068959)	Vstm2b (ENSMUSG00000039257) #33	4930433I11Rik (ENSMUSG00000091692)
Mus_C	ANCESTRAL SPECIES	32	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728.e #31	ENSGT00390000010067 #32	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356 #33	ENSGT00940000154469.a.a.b.b.b
spretus	MODERN SPECIES	16	Lsm14a (MGP_SPRETEiJ_G0030673)	Kctd15 (MGP_SPRETEiJ_G0030674)	Chst8 (MGP_SPRETEiJ_G0030675) #7	Pepd (MGP_SPRETEiJ_G0030676) #8	Cebpg (MGP_SPRETEiJ_G0030677) #9	Cebpa (MGP_SPRETEiJ_G0030678) #10	Slc7a10 (MGP_SPRETEiJ_G0030679) #11	Lrp3 (MGP_SPRETEiJ_G0030680) #12	Gpatch1 (MGP_SPRETEiJ_G0030681) #14	Rhpn2 (MGP_SPRETEiJ_G0030682) #15	Faap24 (MGP_SPRETEiJ_G0030683) #16	Cep89 (MGP_SPRETEiJ_G0030684) #17	Slc7a9 (MGP_SPRETEiJ_G0030685) #18	Tdrd12 (MGP_SPRETEiJ_G0030686) #19	Rgs9bp (MGP_SPRETEiJ_G0030688) #21	Ankrd27 (MGP_SPRETEiJ_G0030689) #22	Pdcd5 (MGP_SPRETEiJ_G0030690) #23	Dpy19l3 (MGP_SPRETEiJ_G0030691) #24	Zfp507 (MGP_SPRETEiJ_G0030692) #25	Tshz3 (MGP_SPRETEiJ_G0030693) #26	Zfp536 (MGP_SPRETEiJ_G0030694) #27	Uri1 (MGP_SPRETEiJ_G0030695) #28	Ccne1 (MGP_SPRETEiJ_G0030696) #29	1600014C10Rik (MGP_SPRETEiJ_G0030697) #30	Plekhf1 (MGP_SPRETEiJ_G0030698) #31	Pop4 (MGP_SPRETEiJ_G0030699) #32	MGP_SPRETEiJ_G0030700	Zfp619 (MGP_SPRETEiJ_G0030701)	Vstm2b (MGP_SPRETEiJ_G0030702) #33	AI987944 (MGP_SPRETEiJ_G0030703)	AW146154 (MGP_SPRETEiJ_G0030704)
Steppe mouse	MODERN SPECIES	3056														ENSMSIG00000018080 #20	Rgs9bp (ENSMSIG00000018095) #21	Ankrd27 (ENSMSIG00000018102) #22	Pdcd5 (ENSMSIG00000018284) #23	Dpy19l3 (ENSMSIG00000018318) #24	Zfp507 (ENSMSIG00000018409) #25	Tshz3 (ENSMSIG00000018467) #26
Ryukyu mouse	MODERN SPECIES	16	Kctd15 (MGP_CAROLIEiJ_G0029575)	Chst8 (MGP_CAROLIEiJ_G0029576) #7	Pepd (MGP_CAROLIEiJ_G0029577) #8	Cebpg (MGP_CAROLIEiJ_G0029578) #9	Cebpa (MGP_CAROLIEiJ_G0029579) #10	Slc7a10 (MGP_CAROLIEiJ_G0029580) #11	Lrp3 (MGP_CAROLIEiJ_G0029581) #12	Gpatch1 (MGP_CAROLIEiJ_G0029582) #14	Rhpn2 (MGP_CAROLIEiJ_G0029583) #15	Faap24 (MGP_CAROLIEiJ_G0029584) #16	Cep89 (MGP_CAROLIEiJ_G0029585) #17	Slc7a9 (MGP_CAROLIEiJ_G0029586) #18	Tdrd12 (MGP_CAROLIEiJ_G0029587) #19	Nudt19 (MGP_CAROLIEiJ_G0029588) #20	Rgs9bp (MGP_CAROLIEiJ_G0029589) #21	Ankrd27 (MGP_CAROLIEiJ_G0029590) #22	MGP_CAROLIEiJ_G0029591 #23	Dpy19l3 (MGP_CAROLIEiJ_G0029592) #24	Zfp507 (MGP_CAROLIEiJ_G0029593) #25	Tshz3 (MGP_CAROLIEiJ_G0029594) #26	Zfp536 (MGP_CAROLIEiJ_G0029595) #27	Uri1 (MGP_CAROLIEiJ_G0029596) #28	Ccne1 (MGP_CAROLIEiJ_G0029597) #29	MGP_CAROLIEiJ_G0029598 #30	Plekhf1 (MGP_CAROLIEiJ_G0029599) #31	Pop4 (MGP_CAROLIEiJ_G0029600) #32	Zfp619 (MGP_CAROLIEiJ_G0029602)	Vstm2b (MGP_CAROLIEiJ_G0029603) #33	AI987944 (MGP_CAROLIEiJ_G0029604)	MGP_CAROLIEiJ_G0029605	MGP_CAROLIEiJ_G0029606
Shrew mouse	MODERN SPECIES		Kctd15 (MGP_PahariEiJ_G0012809)	Chst8 (MGP_PahariEiJ_G0012810) #7	Pepd (MGP_PahariEiJ_G0012811) #8	Cebpg (MGP_PahariEiJ_G0012812) #9	Cebpa (MGP_PahariEiJ_G0012813) #10	Slc7a10 (MGP_PahariEiJ_G0012814) #11	Lrp3 (MGP_PahariEiJ_G0012815) #12	Gpatch1 (MGP_PahariEiJ_G0012816) #14	Rhpn2 (MGP_PahariEiJ_G0012817) #15	Faap24 (MGP_PahariEiJ_G0012818) #16	Cep89 (MGP_PahariEiJ_G0012819) #17	Slc7a9 (MGP_PahariEiJ_G0012820) #18	Tdrd12 (MGP_PahariEiJ_G0012821) #19	Nudt19 (MGP_PahariEiJ_G0012822) #20	Rgs9bp (MGP_PahariEiJ_G0012823) #21	Ankrd27 (MGP_PahariEiJ_G0012824) #22	MGP_PahariEiJ_G0012825 #23	Dpy19l3 (MGP_PahariEiJ_G0012826) #24	Zfp507 (MGP_PahariEiJ_G0012827) #25	Tshz3 (MGP_PahariEiJ_G0012828) #26	Zfp536 (MGP_PahariEiJ_G0012829) #27	Uri1 (MGP_PahariEiJ_G0012830) #28	Ccne1 (MGP_PahariEiJ_G0012831) #29	1600014C10Rik (MGP_PahariEiJ_G0012832) #30	Plekhf1 (MGP_PahariEiJ_G0012833) #31	MGP_PahariEiJ_G0012834	Vstm2b (MGP_PahariEiJ_G0012835) #33	MGP_PahariEiJ_G0012836	AI987944 (MGP_PahariEiJ_G0012838)	2610021A01Rik (MGP_PahariEiJ_G0012839)	MGP_PahariEiJ_G0012840
Rat	MODERN SPECIES		AABR07002969.1 (ENSRNOG00000052945) #8	Cebpg (ENSRNOG00000021144) #9	Slc7a10 (ENSRNOG00000010938) #11	Lrp3 (ENSRNOG00000011451) #12	Wdr88 (ENSRNOG00000037393) #13	Gpatch1 (ENSRNOG00000011584) #14	Snrpg (ENSRNOG00000032232)	Rhpn2 (ENSRNOG00000011885) #15	Faap24 (ENSRNOG00000022393) #16	Cep89 (ENSRNOG00000012140) #17	Slc7a9 (ENSRNOG00000012344) #18	Tdrd12 (ENSRNOG00000012719) #19	AC136661.1 (ENSRNOG00000037380)	Nudt19 (ENSRNOG00000059386) #20	Rgs9bp (ENSRNOG00000012877) #21	Ankrd27 (ENSRNOG00000052814) #22	Pdcd5 (ENSRNOG00000068327) #23	Dpy19l3 (ENSRNOG00000021573) #24	Zfp507 (ENSRNOG00000013565) #25	Tshz3 (ENSRNOG00000013938) #26	RGD1562402 (ENSRNOG00000031859)	Zfp536 (ENSRNOG00000014163) #27	Uri1 (ENSRNOG00000014463) #28	Ccne1 (ENSRNOG00000014786) #29	LOC690000 (ENSRNOG00000014966) #30	Plekhf1 (ENSRNOG00000027724) #31	Pop4 (ENSRNOG00000027646) #32	Marf1-ps1 (ENSRNOG00000051237)	LOC690114 (ENSRNOG00000027370)	LOC365238 (ENSRNOG00000015168)	LOC108348090 (ENSRNOG00000067296)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1067	Chst8 (ENSNGAG00000004945) #7	Pepd (ENSNGAG00000006312) #8	Cebpg (ENSNGAG00000007539) #9	Cebpa (ENSNGAG00000002763) #10	Slc7a10 (ENSNGAG00000009565) #11	Lrp3 (ENSNGAG00000010395) #12	Gpatch1 (ENSNGAG00000012455) #14	ENSNGAG00000017534	Rhpn2 (ENSNGAG00000003058) #15	Faap24 (ENSNGAG00000005467) #16	Cep89 (ENSNGAG00000007623) #17	Slc7a9 (ENSNGAG00000009688) #18	Tdrd12 (ENSNGAG00000000793) #19	Nudt19 (ENSNGAG00000019145) #20	Rgs9bp (ENSNGAG00000007250) #21	Ankrd27 (ENSNGAG00000014970) #22	Pdcd5 (ENSNGAG00000013152) #23
Lesser Egyptian jerboa	MODERN SPECIES	73	Lsm14a (ENSJJAG00000017413)	Kctd15 (ENSJJAG00000015923)	Chst8 (ENSJJAG00000023483) #7	Pepd (ENSJJAG00000018036) #8	Cebpg (ENSJJAG00000009499) #9	ENSJJAG00000014105 #10	Slc7a10 (ENSJJAG00000006090) #11	Lrp3 (ENSJJAG00000017356) #12	Gpatch1 (ENSJJAG00000023765) #14	Rhpn2 (ENSJJAG00000001747) #15	ENSJJAG00000012680 #16	Cep89 (ENSJJAG00000024207) #17	Slc7a9 (ENSJJAG00000014613) #18	ENSJJAG00000018149 #19	Rgs9bp (ENSJJAG00000012886) #21	Ankrd27 (ENSJJAG00000016506) #22	ENSJJAG00000016867 #23	Dpy19l3 (ENSJJAG00000011397) #24	ENSJJAG00000014559 #25	ENSJJAG00000018135 #26	Zfp536 (ENSJJAG00000005397) #27	Uri1 (ENSJJAG00000017190) #28	Ccne1 (ENSJJAG00000013552) #29	1600014C10Rik (ENSJJAG00000015651) #30	Plekhf1 (ENSJJAG00000011982) #31	Pop4 (ENSJJAG00000013376) #32	Vstm2b (ENSJJAG00000022517) #33	Rnf6 (ENSJJAG00000023994)	Cdk8 (ENSJJAG00000009532)	Wasf3 (ENSJJAG00000018294)	Gpr12 (ENSJJAG00000012507)
Kangaroo rat	MODERN SPECIES	411	Lsm14a (ENSDORG00000016326)	Kctd15 (ENSDORG00000025482)	Chst8 (ENSDORG00000025327) #7	Pepd (ENSDORG00000001950) #8	Cebpg (ENSDORG00000027852) #9	Cebpa (ENSDORG00000027904) #10	Slc7a10 (ENSDORG00000002321) #11	Lrp3 (ENSDORG00000002320) #12	Gpatch1 (ENSDORG00000012546) #14	Rhpn2 (ENSDORG00000010758) #15	Cep89 (ENSDORG00000013896) #17	Slc7a9 (ENSDORG00000026148) #18	Tdrd12 (ENSDORG00000012134) #19	ENSDORG00000026153 #20	Rgs9bp (ENSDORG00000015832) #21	Ankrd27 (ENSDORG00000001832) #22	Pdcd5 (ENSDORG00000023317) #23	Dpy19l3 (ENSDORG00000009853) #24	ENSDORG00000013877 #25	ENSDORG00000026232 #26	Zfp536 (ENSDORG00000015237) #27	Uri1 (ENSDORG00000012581) #28	Ccne1 (ENSDORG00000007955) #29	Uqcrfs1 (ENSDORG00000004134) #34
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00570000079107	ENSGT00440000039148	ENSGT00940000160272	ENSGT00390000013276	ENSGT00940000160297	ENSGT00390000012508	ENSGT00930000151055	ENSGT00940000162407	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.nb #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT01050000244808.D.fb.b.a.a.a.a	ENSGT01050000244808.D.fb.b.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT00570000079107	ENSGT00440000039148	ENSGT00940000160272	ENSGT00390000013276	ENSGT00940000160297	ENSGT00390000012508	ENSGT00930000151055	ENSGT00940000162407	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.nb #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT01050000244808.D.fb.b.b.b	ENSGT01050000244808.D.fb.b.a.b
Guinea pig	MODERN SPECIES	56	GAPDHS (ENSCPOG00000010687)	TMEM147 (ENSCPOG00000032771)	ATP4A (ENSCPOG00000005328)	HAUS5 (ENSCPOG00000002950)	RBM42 (ENSCPOG00000012365)	ENSCPOG00000013209	RHPN2 (ENSCPOG00000011968) #15	FAAP24 (ENSCPOG00000011965) #16	CEP89 (ENSCPOG00000001470) #17	ENSCPOG00000011225 #18	ENSCPOG00000030866 #18	ENSCPOG00000034999 #18	TDRD12 (ENSCPOG00000002876) #19	NUDT19 (ENSCPOG00000038218) #20	RGS9BP (ENSCPOG00000000730) #21	ANKRD27 (ENSCPOG00000000160) #22	PDCD5 (ENSCPOG00000040356) #23	DPY19L3 (ENSCPOG00000012483) #24	ENSCPOG00000012473 #25	TSHZ3 (ENSCPOG00000003591) #26	ZNF536 (ENSCPOG00000008744) #27	URI1 (ENSCPOG00000004105) #28	CCNE1 (ENSCPOG00000004836) #29	C19orf12 (ENSCPOG00000021635) #30	PLEKHF1 (ENSCPOG00000036685) #31	POP4 (ENSCPOG00000002992) #32	VSTM2B (ENSCPOG00000022127) #33	UQCRFS1 (ENSCPOG00000038582) #34	ENSCPOG00000020010	ENSCPOG00000005105	FCRL1 (ENSCPOG00000031919)
Hystricomorpha_b	ANCESTRAL SPECIES	8	ENSGT00570000079107	ENSGT00440000039148	ENSGT00940000160272	ENSGT00390000013276	ENSGT00940000160297	ENSGT00390000012508	ENSGT00930000151055	ENSGT00940000162407	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.nb #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT01050000244808.D.fb.b.b.b	ENSGT01050000244808.D.fb.b.a.b
Degu	MODERN SPECIES	124	TMEM147 (ENSODEG00000014601)	ATP4A (ENSODEG00000014297)	HAUS5 (ENSODEG00000015029)	ENSODEG00000020382	RBM42 (ENSODEG00000013705)	ENSODEG00000014537	ENSODEG00000020158	RHPN2 (ENSODEG00000014557) #15	FAAP24 (ENSODEG00000013890) #16	CEP89 (ENSODEG00000014225) #17	ENSODEG00000015062 #18	ENSODEG00000014355 #18	TDRD12 (ENSODEG00000014443) #19	NUDT19 (ENSODEG00000014770) #20	RGS9BP (ENSODEG00000020326) #21	ANKRD27 (ENSODEG00000013621) #22	ENSODEG00000013248 #23	DPY19L3 (ENSODEG00000013833) #24	ENSODEG00000013993 #25	ENSODEG00000014205	TSHZ3 (ENSODEG00000013840) #26	ZNF536 (ENSODEG00000013676) #27	URI1 (ENSODEG00000013616) #28	CCNE1 (ENSODEG00000014690) #29	ENSODEG00000020140	C19orf12 (ENSODEG00000013188) #30	ENSODEG00000020216	ENSODEG00000020166 #31	POP4 (ENSODEG00000013025) #32	VSTM2B (ENSODEG00000014510) #33	ENSODEG00000013453
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	175	ENSCLAG00000016791	ENSCLAG00000012824	GAPDHS (ENSCLAG00000013274)	TMEM147 (ENSCLAG00000017174)	ATP4A (ENSCLAG00000013870)	HAUS5 (ENSCLAG00000011624)	RBM42 (ENSCLAG00000012865)	ETV2 (ENSCLAG00000011446)	RHPN2 (ENSCLAG00000011890) #15	FAAP24 (ENSCLAG00000013484) #16	ENSCLAG00000012488 #17	SLC7A9 (ENSCLAG00000012671) #18	TDRD12 (ENSCLAG00000012138) #19	NUDT19 (ENSCLAG00000015394) #20	RGS9BP (ENSCLAG00000017932) #21	ENSCLAG00000013353 #22	ENSCLAG00000014452 #23	DPY19L3 (ENSCLAG00000013128) #24	ZNF507 (ENSCLAG00000012690) #25	TSHZ3 (ENSCLAG00000012902) #26	ZNF536 (ENSCLAG00000014818) #27	URI1 (ENSCLAG00000014617) #28	CCNE1 (ENSCLAG00000016202) #29	C19orf12 (ENSCLAG00000015360) #30	PLEKHF1 (ENSCLAG00000012584) #31	POP4 (ENSCLAG00000013162) #32	VSTM2B (ENSCLAG00000016538) #33	UQCRFS1 (ENSCLAG00000011437) #34	FCRL5 (ENSCLAG00000011767)	FCRL3 (ENSCLAG00000012604)	FCRL1 (ENSCLAG00000014567)
Long-tailed chinchilla	MODERN SPECIES	172	PAK1IP1 (ENSCLAG00000002755)	TMEM14C (ENSCLAG00000002593)	MAK (ENSCLAG00000002930)	GCM2 (ENSCLAG00000002483)	ENSCLAG00000002229	ELOVL2 (ENSCLAG00000006837)	SMIM13 (ENSCLAG00000006575)	NEDD9 (ENSCLAG00000006274)	TMEM170B (ENSCLAG00000006033)	ADTRP (ENSCLAG00000005720)	HIVEP1 (ENSCLAG00000004665)	EDN1 (ENSCLAG00000003816)	PHACTR1 (ENSCLAG00000002830)	TBC1D7 (ENSCLAG00000002338)	GFOD1 (ENSCLAG00000002209)	ENSCLAG00000002044 #22	SIRT5 (ENSCLAG00000004167)	NOL7 (ENSCLAG00000003793)	RANBP9 (ENSCLAG00000003398)	MCUR1 (ENSCLAG00000003123)	RNF182 (ENSCLAG00000003589)	CD83 (ENSCLAG00000003489)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	20	SBSN (ENSHGLG00000015078)	GAPDHS (ENSHGLG00000015071)	TMEM147 (ENSHGLG00000018035)	ATP4A (ENSHGLG00000014936)	HAUS5 (ENSHGLG00000015256)	RBM42 (ENSHGLG00000008418)	ENSHGLG00000006342	ENSHGLG00000005491 #15	FAAP24 (ENSHGLG00000047787) #16	CEP89 (ENSHGLG00000015749) #17	TDRD12 (ENSHGLG00000015608) #19	ENSHGLG00000049663	ENSHGLG00000032764	ENSHGLG00000033957	RGS9BP (ENSHGLG00000043502) #21	ENSHGLG00000000739 #22	PDCD5 (ENSHGLG00000015879) #23	DPY19L3 (ENSHGLG00000008160) #24	ZNF507 (ENSHGLG00000014642) #25	ENSHGLG00000048014	TSHZ3 (ENSHGLG00000015820) #26	ZNF536 (ENSHGLG00000013749) #27	URI1 (ENSHGLG00000009294) #28	CCNE1 (ENSHGLG00000005512) #29	C19orf12 (ENSHGLG00000013665) #30	PLEKHF1 (ENSHGLG00000015663) #31	POP4 (ENSHGLG00000043121) #32	VSTM2B (ENSHGLG00000010328) #33	ENSHGLG00000034008	UQCRFS1 (ENSHGLG00000046640) #34	ENSHGLG00000049204
Naked mole-rat female	MODERN SPECIES	2	ENSHGLG00000018220	ENSHGLG00000047678	ENSHGLG00000013471	ENSHGLG00000039932	HSPH1 (ENSHGLG00000006908)	TEX26 (ENSHGLG00000018916)	MEDAG (ENSHGLG00000037818)	ALOX5AP (ENSHGLG00000013689)	USPL1 (ENSHGLG00000036213)	ENSHGLG00000003352	KATNAL1 (ENSHGLG00000003538)	UBL3 (ENSHGLG00000040587)	ENSHGLG00000033244	ENSHGLG00000019220	ENSHGLG00000013589	ENSHGLG00000012383 #22	ENSHGLG00000039882	SLC46A3 (ENSHGLG00000007999)	ENSHGLG00000008991	FLT1 (ENSHGLG00000003643)	PAN3 (ENSHGLG00000018782)	FLT3 (ENSHGLG00000005717)	URAD (ENSHGLG00000008479)	CDX2 (ENSHGLG00000009166)	PDX1 (ENSHGLG00000010243)	GSX1 (ENSHGLG00000039858)	ENSHGLG00000003202	POLR1D (ENSHGLG00000039229)	LNX2 (ENSHGLG00000003410)	MTIF3 (ENSHGLG00000003959)	ENSHGLG00000004173
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676.g #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.s #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676.g #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.s #34
Marmotini_b	ANCESTRAL SPECIES	50	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676.g #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.s #34
Arctic ground squirrel	MODERN SPECIES	86	CHST8 (ENSUPAG00010010581) #7	PEPD (ENSUPAG00010010563) #8	CEBPG (ENSUPAG00010010559) #9	ENSUPAG00010010556 #10	SLC7A10 (ENSUPAG00010010545) #11	LRP3 (ENSUPAG00010010534) #12	ENSUPAG00010010532	ENSUPAG00010010526 #13	GPATCH1 (ENSUPAG00010010496) #14	RHPN2 (ENSUPAG00010010489) #15	ENSUPAG00010010487 #16	CEP89 (ENSUPAG00010010410) #17	SLC7A9 (ENSUPAG00010010354) #18	TDRD12 (ENSUPAG00010010237) #19	RGS9BP (ENSUPAG00010010233) #21	ANKRD27 (ENSUPAG00010010181) #22	PDCD5 (ENSUPAG00010010174) #23	ZNF507 (ENSUPAG00010010113) #25	TSHZ3 (ENSUPAG00010010104) #26	ZNF536 (ENSUPAG00010010061) #27	URI1 (ENSUPAG00010010020) #28	CCNE1 (ENSUPAG00010010001) #29	C19orf12 (ENSUPAG00010009992) #30	PLEKHF1 (ENSUPAG00010009986) #31	POP4 (ENSUPAG00010009976) #32	VSTM2B (ENSUPAG00010009950) #33	UQCRFS1 (ENSUPAG00010009946) #34
Squirrel	MODERN SPECIES	170	LSM14A (ENSSTOG00000002785)	KCTD15 (ENSSTOG00000006412)	CHST8 (ENSSTOG00000007349) #7	PEPD (ENSSTOG00000007602) #8	CEBPG (ENSSTOG00000007596) #9	ENSSTOG00000027963 #10	SLC7A10 (ENSSTOG00000009450) #11	LRP3 (ENSSTOG00000009443) #12	GPATCH1 (ENSSTOG00000003720) #14	RHPN2 (ENSSTOG00000002103) #15	CEP89 (ENSSTOG00000019373) #17	SLC7A9 (ENSSTOG00000013674) #18	TDRD12 (ENSSTOG00000013638) #19	ENSSTOG00000031724 #20	RGS9BP (ENSSTOG00000027616) #21	ANKRD27 (ENSSTOG00000013613) #22	PDCD5 (ENSSTOG00000025794) #23	DPY19L3 (ENSSTOG00000025908) #24	ZNF507 (ENSSTOG00000022278) #25	TSHZ3 (ENSSTOG00000024242) #26	ZNF536 (ENSSTOG00000013259) #27	URI1 (ENSSTOG00000009658) #28	CCNE1 (ENSSTOG00000009648) #29	C19orf12 (ENSSTOG00000020602) #30	PLEKHF1 (ENSSTOG00000023108) #31	POP4 (ENSSTOG00000011016) #32	VSTM2B (ENSSTOG00000020445) #33	ENSSTOG00000011909 #34
Alpin marmot	MODERN SPECIES	45	CHST8 (ENSMMMG00000006659) #7	PEPD (ENSMMMG00000006673) #8	ENSMMMG00000006690 #9	ENSMMMG00000006703 #10	SLC7A10 (ENSMMMG00000006705) #11	LRP3 (ENSMMMG00000006727) #12	ENSMMMG00000006739 #13	GPATCH1 (ENSMMMG00000006748) #14	RHPN2 (ENSMMMG00000006785) #15	FAAP24 (ENSMMMG00000006814) #16	CEP89 (ENSMMMG00000006832) #17	SLC7A9 (ENSMMMG00000007036) #18	TDRD12 (ENSMMMG00000007074) #19	NUDT19 (ENSMMMG00000007175) #20	RGS9BP (ENSMMMG00000007176) #21	ANKRD27 (ENSMMMG00000007203) #22	PDCD5 (ENSMMMG00000007305) #23	DPY19L3 (ENSMMMG00000007308) #24	ZNF507 (ENSMMMG00000007322) #25	TSHZ3 (ENSMMMG00000007335) #26	ZNF536 (ENSMMMG00000007356) #27	URI1 (ENSMMMG00000007374) #28	CCNE1 (ENSMMMG00000007385) #29	C19orf12 (ENSMMMG00000007391) #30	PLEKHF1 (ENSMMMG00000007421) #31	POP4 (ENSMMMG00000007446) #32	VSTM2B (ENSMMMG00000007454) #33
Eurasian red squirrel	MODERN SPECIES	8	CHST8 (ENSSVLG00005022924) #7	PEPD (ENSSVLG00005022623) #8	CEBPG (ENSSVLG00005022576) #9	CEBPA (ENSSVLG00005022560) #10	SLC7A10 (ENSSVLG00005022473) #11	LRP3 (ENSSVLG00005022405) #12	WDR88 (ENSSVLG00005022304) #13	GPATCH1 (ENSSVLG00005022166) #14	RHPN2 (ENSSVLG00005022031) #15	ENSSVLG00005021973 #16	CEP89 (ENSSVLG00005021928) #17	SLC7A9 (ENSSVLG00005021851) #18	TDRD12 (ENSSVLG00005021333) #19	NUDT19 (ENSSVLG00005021230) #20	RGS9BP (ENSSVLG00005021208) #21	ANKRD27 (ENSSVLG00005021121) #22	ENSSVLG00005020933 #23	DPY19L3 (ENSSVLG00005020851) #24	ZNF507 (ENSSVLG00005020811) #25	TSHZ3 (ENSSVLG00005020787) #26	ZNF536 (ENSSVLG00005020746) #27	URI1 (ENSSVLG00005020418) #28	CCNE1 (ENSSVLG00005020303) #29	ENSSVLG00005020245 #30	PLEKHF1 (ENSSVLG00005020227) #31	POP4 (ENSSVLG00005020169) #32	VSTM2B (ENSSVLG00005020091) #33	ENSSVLG00005020050 #34	ENSSVLG00005020000	ENSSVLG00005019946	ENSSVLG00005019913
Lagomorpha	ANCESTRAL SPECIES	121	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Rabbit	MODERN SPECIES	455													ENSOCUG00000013666	NUDT19 (ENSOCUG00000032610) #20	RGS9BP (ENSOCUG00000001135) #21	ANKRD27 (ENSOCUG00000013225) #22	PDCD5 (ENSOCUG00000013220) #23	DPY19L3 (ENSOCUG00000013196) #24	ZNF507 (ENSOCUG00000014069) #25	TSHZ3 (ENSOCUG00000015902) #26	ENSOCUG00000024019	ZNF536 (ENSOCUG00000022631) #27	URI1 (ENSOCUG00000015063) #28	ENSOCUG00000009143 #29	C19orf12 (ENSOCUG00000002865) #30	POP4 (ENSOCUG00000015974) #32	VSTM2B (ENSOCUG00000023884) #33	ENSOCUG00000029273 #34
Pika	MODERN SPECIES	3743																ANKRD27 (ENSOPRG00000016649) #22	PDCD5 (ENSOPRG00000016642) #23	DPY19L3 (ENSOPRG00000016622) #24
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315
Suina	ANCESTRAL SPECIES	2	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Pig	MODERN SPECIES	14	CHST8 (ENSSSCG00000035222) #7	PEPD (ENSSSCG00000002868) #8	CEBPG (ENSSSCG00000002867) #9	CEBPA (ENSSSCG00000002866) #10	SLC7A10 (ENSSSCG00000002864) #11	LRP3 (ENSSSCG00000002863) #12	WDR88 (ENSSSCG00000002862) #13	GPATCH1 (ENSSSCG00000002865) #14	RHPN2 (ENSSSCG00000022312) #15	FAAP24 (ENSSSCG00000040905) #16	CEP89 (ENSSSCG00000025152) #17	SLC7A9 (ENSSSCG00000022948) #18	TDRD12 (ENSSSCG00000002857) #19	NUDT19 (ENSSSCG00000036294) #20	RGS9BP (ENSSSCG00000051830) #21	ANKRD27 (ENSSSCG00000002859) #22	PDCD5 (ENSSSCG00000002860) #23	DPY19L3 (ENSSSCG00000022521) #24	ZNF507 (ENSSSCG00000025139) #25	TSHZ3 (ENSSSCG00000025214) #26	ZNF536 (ENSSSCG00000029234) #27	URI1 (ENSSSCG00000025912) #28	ENSSSCG00000002855 #29	C19orf12 (ENSSSCG00000032153) #30	PLEKHF1 (ENSSSCG00000002852) #31	POP4 (ENSSSCG00000002854) #32	VSTM2B (ENSSSCG00000023921) #33	UQCRFS1 (ENSSSCG00000027085) #34	ENSSSCG00000038906	ENSSSCG00000002850	SHCBP1 (ENSSSCG00000002849)
Chacoan peccary	MODERN SPECIES	104	CEBPA (ENSCWAG00000000938) #10	SLC7A10 (ENSCWAG00000000952) #11	LRP3 (ENSCWAG00000000977) #12	WDR88 (ENSCWAG00000000990) #13	GPATCH1 (ENSCWAG00000001016) #14	RHPN2 (ENSCWAG00000001061) #15	FAAP24 (ENSCWAG00000001092) #16	CEP89 (ENSCWAG00000001114) #17	SLC7A9 (ENSCWAG00000001135) #18	TDRD12 (ENSCWAG00000001230) #19	ENSCWAG00000001479	ENSCWAG00000001495	ENSCWAG00000001506	NUDT19 (ENSCWAG00000001513) #20	RGS9BP (ENSCWAG00000001525) #21	ANKRD27 (ENSCWAG00000001538) #22	ENSCWAG00000001578 #23	DPY19L3 (ENSCWAG00000001605) #24	ENSCWAG00000001629	ZNF507 (ENSCWAG00000001636) #25	TSHZ3 (ENSCWAG00000001647) #26	ENSCWAG00000001653	ZNF536 (ENSCWAG00000001663) #27	URI1 (ENSCWAG00000001670) #28	CCNE1 (ENSCWAG00000001690) #29	C19orf12 (ENSCWAG00000001799) #30	PLEKHF1 (ENSCWAG00000001825) #31	POP4 (ENSCWAG00000001837) #32	VSTM2B (ENSCWAG00000001853) #33	UQCRFS1 (ENSCWAG00000001869) #34	SHCBP1 (ENSCWAG00000001888)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.sb.b #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00760000120431	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.sb.b #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.sb.b #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370.i
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.sb.b #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370.i
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.tb #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370.i
Narwhal	MODERN SPECIES	296	CEBPG (ENSMMNG00015002501) #9	CEBPA (ENSMMNG00015002491) #10	SLC7A10 (ENSMMNG00015002412) #11	LRP3 (ENSMMNG00015002346) #12	WDR88 (ENSMMNG00015002263) #13	GPATCH1 (ENSMMNG00015002182) #14	RHPN2 (ENSMMNG00015002110) #15	FAAP24 (ENSMMNG00015002077) #16	ENSMMNG00015002056	CEP89 (ENSMMNG00015001947) #17	ENSMMNG00015001894	SLC7A9 (ENSMMNG00015001863) #18	TDRD12 (ENSMMNG00015001768) #19	NUDT19 (ENSMMNG00015001712) #20	RGS9BP (ENSMMNG00015001697) #21	ANKRD27 (ENSMMNG00015001650) #22	PDCD5 (ENSMMNG00015001602) #23	DPY19L3 (ENSMMNG00015001544) #24	ZNF507 (ENSMMNG00015001504) #25	TSHZ3 (ENSMMNG00015001458) #26	ZNF536 (ENSMMNG00015001436) #27	URI1 (ENSMMNG00015001385) #28	CCNE1 (ENSMMNG00015001304) #29	C19orf12 (ENSMMNG00015001260) #30	PLEKHF1 (ENSMMNG00015001239) #31	POP4 (ENSMMNG00015001208) #32	VSTM2B (ENSMMNG00015001182) #33	UQCRFS1 (ENSMMNG00015001165) #34	SHCBP1 (ENSMMNG00015001117)	VPS35 (ENSMMNG00015001063)	ENSMMNG00015001005
Beluga whale	MODERN SPECIES	14	CEBPG (ENSDLEG00000000840) #9	CEBPA (ENSDLEG00000000849) #10	SLC7A10 (ENSDLEG00000000869) #11	LRP3 (ENSDLEG00000000916) #12	ENSDLEG00000000950 #13	GPATCH1 (ENSDLEG00000000964) #14	RHPN2 (ENSDLEG00000000997) #15	FAAP24 (ENSDLEG00000001028) #16	CEP89 (ENSDLEG00000001045) #17	ENSDLEG00000001076	SLC7A9 (ENSDLEG00000001083) #18	ENSDLEG00000001110	TDRD12 (ENSDLEG00000001176) #19	NUDT19 (ENSDLEG00000001447) #20	RGS9BP (ENSDLEG00000001457) #21	ANKRD27 (ENSDLEG00000001495) #22	ENSDLEG00000001621 #23	DPY19L3 (ENSDLEG00000001647) #24	ZNF507 (ENSDLEG00000001695) #25	TSHZ3 (ENSDLEG00000001711) #26	ZNF536 (ENSDLEG00000001724) #27	URI1 (ENSDLEG00000001739) #28	CCNE1 (ENSDLEG00000001752) #29	CUNH19orf12 (ENSDLEG00000001761) #30	POP4 (ENSDLEG00000001765) #32	VSTM2B (ENSDLEG00000001777) #33	UQCRFS1 (ENSDLEG00000001783) #34
Vaquita	MODERN SPECIES	10	PEPD (ENSPSNG00000019536) #8	CEBPG (ENSPSNG00000019601) #9	CEBPA (ENSPSNG00000019621) #10	SLC7A10 (ENSPSNG00000019639) #11	LRP3 (ENSPSNG00000019712) #12	WDR88 (ENSPSNG00000019754) #13	GPATCH1 (ENSPSNG00000019894) #14	RHPN2 (ENSPSNG00000019928) #15	FAAP24 (ENSPSNG00000019954) #16	CEP89 (ENSPSNG00000019994) #17	ENSPSNG00000020046	SLC7A9 (ENSPSNG00000020070) #18	TDRD12 (ENSPSNG00000020182) #19	NUDT19 (ENSPSNG00000020373) #20	RGS9BP (ENSPSNG00000020384) #21	ANKRD27 (ENSPSNG00000020465) #22	ENSPSNG00000020582 #23	DPY19L3 (ENSPSNG00000020640) #24	ZNF507 (ENSPSNG00000020685) #25	TSHZ3 (ENSPSNG00000020733) #26	ZNF536 (ENSPSNG00000020763) #27	URI1 (ENSPSNG00000020804) #28	CCNE1 (ENSPSNG00000020886) #29	C19orf12 (ENSPSNG00000020941) #30	PLEKHF1 (ENSPSNG00000020975) #31	POP4 (ENSPSNG00000020993) #32	VSTM2B (ENSPSNG00000021024) #33	UQCRFS1 (ENSPSNG00000021044) #34	SHCBP1 (ENSPSNG00000021057)	VPS35 (ENSPSNG00000021085)	ENSPSNG00000021135
Dolphin	MODERN SPECIES	3255																ANKRD27 (ENSTTRG00000004019) #22	PDCD5 (ENSTTRG00000003999) #23
Sperm whale	MODERN SPECIES	8	PEPD (ENSPCTG00005014153) #8	CEBPG (ENSPCTG00005014307) #9	CEBPA (ENSPCTG00005014331) #10	SLC7A10 (ENSPCTG00005014353) #11	LRP3 (ENSPCTG00005014474) #12	WDR88 (ENSPCTG00005014581) #13	GPATCH1 (ENSPCTG00005014911) #14	RHPN2 (ENSPCTG00005014981) #15	ENSPCTG00005015197	FAAP24 (ENSPCTG00005015251) #16	CEP89 (ENSPCTG00005015339) #17	SLC7A9 (ENSPCTG00005015420) #18	TDRD12 (ENSPCTG00005015644) #19	NUDT19 (ENSPCTG00005016540) #20	RGS9BP (ENSPCTG00005016564) #21	ANKRD27 (ENSPCTG00005016618) #22	PDCD5 (ENSPCTG00005016856) #23	DPY19L3 (ENSPCTG00005017005) #24	ZNF507 (ENSPCTG00005017138) #25	ENSPCTG00005017174	TSHZ3 (ENSPCTG00005017204) #26	ZNF536 (ENSPCTG00005017245) #27	URI1 (ENSPCTG00005017313) #28	ENSPCTG00005017597	CCNE1 (ENSPCTG00005017668) #29	C17H19orf12 (ENSPCTG00005017766) #30	PLEKHF1 (ENSPCTG00005017836) #31	POP4 (ENSPCTG00005017854) #32	VSTM2B (ENSPCTG00005017910) #33	ENSPCTG00005017977 #34	ENSPCTG00005018104
Blue whale	MODERN SPECIES	10	CHST8 (ENSBMSG00010017297) #7	PEPD (ENSBMSG00010017360) #8	CEBPG (ENSBMSG00010017424) #9	CEBPA (ENSBMSG00010017438) #10	SLC7A10 (ENSBMSG00010017456) #11	LRP3 (ENSBMSG00010017500) #12	WDR88 (ENSBMSG00010017527) #13	GPATCH1 (ENSBMSG00010017658) #14	RHPN2 (ENSBMSG00010017698) #15	FAAP24 (ENSBMSG00010017784) #16	CEP89 (ENSBMSG00010017830) #17	SLC7A9 (ENSBMSG00010017871) #18	ENSBMSG00010017925	NUDT19 (ENSBMSG00010017985) #20	RGS9BP (ENSBMSG00010017993) #21	ANKRD27 (ENSBMSG00010018041) #22	ENSBMSG00010018205 #23	DPY19L3 (ENSBMSG00010018255) #24	ZNF507 (ENSBMSG00010018417) #25	ENSBMSG00010018457	TSHZ3 (ENSBMSG00010018482) #26	ZNF536 (ENSBMSG00010018499) #27	URI1 (ENSBMSG00010018529) #28	CCNE1 (ENSBMSG00010018593) #29	ENSBMSG00010018694 #30	PLEKHF1 (ENSBMSG00010018715) #31	POP4 (ENSBMSG00010018728) #32	VSTM2B (ENSBMSG00010018756) #33	UQCRFS1 (ENSBMSG00010018781) #34	SHCBP1 (ENSBMSG00010018800)	ENSBMSG00010018825
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00940000157868.c	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00940000157868.c	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Bos	ANCESTRAL SPECIES	4	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00940000157868.c	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377
Domestic yak	MODERN SPECIES	12	ENSBGRG00000012376 #10	ENSBGRG00000012424	SLC7A10 (ENSBGRG00000012434) #11	LRP3 (ENSBGRG00000012595) #12	WDR88 (ENSBGRG00000012742) #13	GPATCH1 (ENSBGRG00000012937) #14	RHPN2 (ENSBGRG00000013257) #15	ENSBGRG00000013384	FAAP24 (ENSBGRG00000013456) #16	CEP89 (ENSBGRG00000013711) #17	SLC7A9 (ENSBGRG00000014100) #18	TDRD12 (ENSBGRG00000014365) #19	NUDT19 (ENSBGRG00000015404) #20	ENSBGRG00000015627	RGS9BP (ENSBGRG00000015694) #21	ANKRD27 (ENSBGRG00000015781) #22	PDCD5 (ENSBGRG00000016600) #23	DPY19L3 (ENSBGRG00000016779) #24	ZNF507 (ENSBGRG00000017072) #25	ENSBGRG00000017301 #26	ENSBGRG00000017388	ZNF536 (ENSBGRG00000017429) #27	URI1 (ENSBGRG00000017617) #28	CCNE1 (ENSBGRG00000017848) #29	C19orf12 (ENSBGRG00000018064) #30	PLEKHF1 (ENSBGRG00000018110) #31	POP4 (ENSBGRG00000018144) #32	ENSBGRG00000018230	CMTR2 (ENSBGRG00000018577)	CALB2 (ENSBGRG00000018597)	TLE7 (ENSBGRG00000018847)
Wild yak	MODERN SPECIES	933								ENSBMUG00000019499 #14	ENSBMUG00000019484	RHPN2 (ENSBMUG00000019457) #15	FAAP24 (ENSBMUG00000019406) #16	CEP89 (ENSBMUG00000019365) #17	SLC7A9 (ENSBMUG00000019309) #18	TDRD12 (ENSBMUG00000019251) #19	RGS9BP (ENSBMUG00000019088) #21	ANKRD27 (ENSBMUG00000019080) #22	PDCD5 (ENSBMUG00000019049) #23	DPY19L3 (ENSBMUG00000018994) #24	ZNF507 (ENSBMUG00000018933) #25
Bos_b	ANCESTRAL SPECIES		ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000154509.y.b.a.a.b	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00950000186085	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00940000157868.c	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Cow	MODERN SPECIES	9	CHST8 (ENSBTAG00000047670) #7	PEPD (ENSBTAG00000031941) #8	SLC7A10 (ENSBTAG00000046544) #11	LRP3 (ENSBTAG00000047062) #12	WDR88 (ENSBTAG00000031810) #13	GPATCH1 (ENSBTAG00000000721) #14	ENSBTAG00000049582	RHPN2 (ENSBTAG00000003089) #15	FAAP24 (ENSBTAG00000010403) #16	CEP89 (ENSBTAG00000004864) #17	SLC7A9 (ENSBTAG00000013338) #18	TDRD12 (ENSBTAG00000019266) #19	ENSBTAG00000049809	NUDT19 (ENSBTAG00000023614) #20	RGS9BP (ENSBTAG00000039441) #21	ANKRD27 (ENSBTAG00000009305) #22	PDCD5 (ENSBTAG00000009304) #23	DPY19L3 (ENSBTAG00000015165) #24	ZNF507 (ENSBTAG00000014123) #25	TSHZ3 (ENSBTAG00000002687) #26	ZNF536 (ENSBTAG00000007262) #27	URI1 (ENSBTAG00000007559) #28	CCNE1 (ENSBTAG00000004735) #29	C18H19orf12 (ENSBTAG00000020434) #30	PLEKHF1 (ENSBTAG00000008625) #31	POP4 (ENSBTAG00000002223) #32	ENSBTAG00000051512	CMTR2 (ENSBTAG00000047367)	CALB2 (ENSBTAG00000001075)	ZNF23 (ENSBTAG00000050281)	ZNF19 (ENSBTAG00000032018)
Hybrid Bos Indicus	MODERN SPECIES	9	PEPD (ENSBIXG00005005052) #8	CEBPG (ENSBIXG00005028763) #9	CEBPA (ENSBIXG00005028726) #10	SLC7A10 (ENSBIXG00005028713) #11	LRP3 (ENSBIXG00005004954) #12	WDR88 (ENSBIXG00005028616) #13	GPATCH1 (ENSBIXG00005028563) #14	RHPN2 (ENSBIXG00005004919) #15	ENSBIXG00005028497	FAAP24 (ENSBIXG00005002469) #16	CEP89 (ENSBIXG00005028440) #17	SLC7A9 (ENSBIXG00005004880) #18	TDRD12 (ENSBIXG00005028317) #19	ENSBIXG00005028232	RGS9BP (ENSBIXG00005028222) #21	ANKRD27 (ENSBIXG00005028194) #22	ENSBIXG00005004831	DPY19L3 (ENSBIXG00005028026) #24	ZNF507 (ENSBIXG00005027929) #25	ENSBIXG00005027900	TSHZ3 (ENSBIXG00005027810) #26	ZNF536 (ENSBIXG00005004770) #27	URI1 (ENSBIXG00005027711) #28	CCNE1 (ENSBIXG00005027655) #29	C19orf12 (ENSBIXG00005027595) #30	PLEKHF1 (ENSBIXG00005027531) #31	POP4 (ENSBIXG00005027514) #32	ENSBIXG00005027467	ENSBIXG00005004688	CMTR2 (ENSBIXG00005027123)	CALB2 (ENSBIXG00005027092)
American bison	MODERN SPECIES	3196	CHST8 (ENSBBBG00000008256) #7	PEPD (ENSBBBG00000025444) #8	CEBPG (ENSBBBG00000025507) #9	SLC7A10 (ENSBBBG00000010361) #11	LRP3 (ENSBBBG00000010366) #12	WDR88 (ENSBBBG00000007393) #13	GPATCH1 (ENSBBBG00000010401) #14	ENSBBBG00000010409	RHPN2 (ENSBBBG00000010413) #15	FAAP24 (ENSBBBG00000010419) #16	CEP89 (ENSBBBG00000007585) #17	SLC7A9 (ENSBBBG00000010461) #18	ENSBBBG00000010472	ENSBBBG00000010478 #20	RGS9BP (ENSBBBG00000010484) #21	ANKRD27 (ENSBBBG00000010505) #22	PDCD5 (ENSBBBG00000010511) #23	DPY19L3 (ENSBBBG00000010533) #24	ZNF507 (ENSBBBG00000010540) #25	ENSBBBG00000010547	ENSBBBG00000007020
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00940000157868.c	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b
Rambouillet Sheep	MODERN SPECIES	5	CEBPG (ENSOARG00020011763) #9	CEBPA (ENSOARG00020011732) #10	SLC7A10 (ENSOARG00020011600) #11	LRP3 (ENSOARG00020011439) #12	ENSOARG00020011383 #13	GPATCH1 (ENSOARG00020011298) #14	RHPN2 (ENSOARG00020011137) #15	FAAP24 (ENSOARG00020011075) #16	CEP89 (ENSOARG00020010986) #17	SLC7A9 (ENSOARG00020010886) #18	TDRD12 (ENSOARG00020010036) #19	NUDT19 (ENSOARG00020018292) #20	ENSOARG00020018245	RGS9BP (ENSOARG00020018201) #21	TLCD3A (ENSOARG00020018181)	ANKRD27 (ENSOARG00020017656) #22	PDCD5 (ENSOARG00020017391) #23	DPY19L3 (ENSOARG00020017008) #24	ZNF507 (ENSOARG00020016947) #25	ENSOARG00020016916	TSHZ3 (ENSOARG00020016853) #26	ZNF536 (ENSOARG00020016711) #27	URI1 (ENSOARG00020016490) #28	CCNE1 (ENSOARG00020016006) #29	C19orf12 (ENSOARG00020015895) #30	PLEKHF1 (ENSOARG00020015872) #31	POP4 (ENSOARG00020015812) #32	ENSOARG00020015294	CMTR2 (ENSOARG00020015255)	CALB2 (ENSOARG00020015182)	TLE7 (ENSOARG00020015063)
Goat	MODERN SPECIES	9	LSM14A (ENSCHIG00000009458)	KCTD15 (ENSCHIG00000023579)	CHST8 (ENSCHIG00000019583) #7	PEPD (ENSCHIG00000015514) #8	CEBPG (ENSCHIG00000008784) #9	CEBPA (ENSCHIG00000011587) #10	SLC7A10 (ENSCHIG00000023717) #11	LRP3 (ENSCHIG00000012481) #12	GPATCH1 (ENSCHIG00000019626) #14	ENSCHIG00000023853	RHPN2 (ENSCHIG00000010158) #15	FAAP24 (ENSCHIG00000021119) #16	CEP89 (ENSCHIG00000014142) #17	NUDT19 (ENSCHIG00000021537) #20	RGS9BP (ENSCHIG00000007331) #21	ANKRD27 (ENSCHIG00000017376) #22	PDCD5 (ENSCHIG00000006484) #23	DPY19L3 (ENSCHIG00000021524) #24	ZNF507 (ENSCHIG00000026183) #25	ENSCHIG00000020296	TSHZ3 (ENSCHIG00000015004) #26	ZNF536 (ENSCHIG00000015719) #27	URI1 (ENSCHIG00000011466) #28	CCNE1 (ENSCHIG00000024742) #29	C19orf12 (ENSCHIG00000023412) #30	PLEKHF1 (ENSCHIG00000005768) #31	POP4 (ENSCHIG00000016743) #32	HYDIN (ENSCHIG00000026411)	ENSCHIG00000013255	CMTR2 (ENSCHIG00000008526)	CALB2 (ENSCHIG00000019148)
Siberian musk deer	MODERN SPECIES	125	PEPD (ENSMMSG00000000671) #8	CEBPG (ENSMMSG00000000734) #9	CEBPA (ENSMMSG00000000749) #10	SLC7A10 (ENSMMSG00000000765) #11	LRP3 (ENSMMSG00000000798) #12	WDR88 (ENSMMSG00000000832) #13	GPATCH1 (ENSMMSG00000000877) #14	RHPN2 (ENSMMSG00000000908) #15	ENSMMSG00000000960	FAAP24 (ENSMMSG00000000974) #16	CEP89 (ENSMMSG00000001009) #17	SLC7A9 (ENSMMSG00000001076) #18	TDRD12 (ENSMMSG00000001219) #19	NUDT19 (ENSMMSG00000001655) #20	RGS9BP (ENSMMSG00000001664) #21	ANKRD27 (ENSMMSG00000001694) #22	PDCD5 (ENSMMSG00000001787) #23	DPY19L3 (ENSMMSG00000001821) #24	ZNF507 (ENSMMSG00000001851) #25	ENSMMSG00000001861	ENSMMSG00000001891	TSHZ3 (ENSMMSG00000001900) #26	ZNF536 (ENSMMSG00000001908) #27	URI1 (ENSMMSG00000001916) #28	CCNE1 (ENSMMSG00000001931) #29	C19orf12 (ENSMMSG00000001952) #30	POP4 (ENSMMSG00000001970) #32	HYDIN (ENSMMSG00000002047)	ENSMMSG00000002328	CMTR2 (ENSMMSG00000002352)	CALB2 (ENSMMSG00000002376)
Yarkand deer	MODERN SPECIES	27	CHST8 (ENSCHYG00000008167) #7	PEPD (ENSCHYG00000008012) #8	CEBPG (ENSCHYG00000007966) #9	CEBPA (ENSCHYG00000007953) #10	SLC7A10 (ENSCHYG00000007871) #11	LRP3 (ENSCHYG00000007799) #12	ENSCHYG00000007774 #13	GPATCH1 (ENSCHYG00000007727) #14	RHPN2 (ENSCHYG00000007660) #15	FAAP24 (ENSCHYG00000007619) #16	CEP89 (ENSCHYG00000007507) #17	SLC7A9 (ENSCHYG00000007447) #18	TDRD12 (ENSCHYG00000007254) #19	NUDT19 (ENSCHYG00000007216) #20	RGS9BP (ENSCHYG00000007182) #21	ANKRD27 (ENSCHYG00000006798) #22	PDCD5 (ENSCHYG00000006657) #23	DPY19L3 (ENSCHYG00000006514) #24	ZNF507 (ENSCHYG00000006472) #25	TSHZ3 (ENSCHYG00000006419) #26	ZNF536 (ENSCHYG00000006308) #27	ENSCHYG00000006259	URI1 (ENSCHYG00000006211) #28	CCNE1 (ENSCHYG00000006119) #29	C19orf12 (ENSCHYG00000006082) #30	PLEKHF1 (ENSCHYG00000006065) #31	ENSCHYG00000006027 #32	ENSCHYG00000006005	ENSCHYG00000005945	CMTR2 (ENSCHYG00000005918)	CALB2 (ENSCHYG00000005859)
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370	ENSGT00940000160007
Alpaca	MODERN SPECIES	1831												CEP89 (ENSVPAG00000012057) #17	SLC7A9 (ENSVPAG00000012055) #18	TDRD12 (ENSVPAG00000012051) #19	NUDT19 (ENSVPAG00000012050) #20	ENSVPAG00000012047 #22	PDCD5 (ENSVPAG00000012046) #23	DPY19L3 (ENSVPAG00000012045) #24	ZNF507 (ENSVPAG00000012044) #25
Arabian camel	MODERN SPECIES	35	CHST8 (ENSCDRG00005016814) #7	PEPD (ENSCDRG00005017266) #8	CEBPG (ENSCDRG00005017885) #9	CEBPA (ENSCDRG00005017974) #10	SLC7A10 (ENSCDRG00005018085) #11	LRP3 (ENSCDRG00005018325) #12	ENSCDRG00005018548 #13	GPATCH1 (ENSCDRG00005018715) #14	RHPN2 (ENSCDRG00005019052) #15	FAAP24 (ENSCDRG00005019258) #16	CEP89 (ENSCDRG00005019493) #17	SLC7A9 (ENSCDRG00005019910) #18	TDRD12 (ENSCDRG00005020226) #19	NUDT19 (ENSCDRG00005020362) #20	RGS9BP (ENSCDRG00005020448) #21	ANKRD27 (ENSCDRG00005020575) #22	ENSCDRG00005020847 #23	DPY19L3 (ENSCDRG00005021111) #24	ZNF507 (ENSCDRG00005021348) #25	ENSCDRG00005021461	TSHZ3 (ENSCDRG00005021492) #26	ZNF536 (ENSCDRG00005021564) #27	URI1 (ENSCDRG00005021639) #28	CCNE1 (ENSCDRG00005021725) #29	C19orf12 (ENSCDRG00005021821) #30	PLEKHF1 (ENSCDRG00005021848) #31	POP4 (ENSCDRG00005021850) #32	UQCRFS1 (ENSCDRG00005021891) #34	ENSCDRG00005021909	SHCBP1 (ENSCDRG00005021912)	VPS35 (ENSCDRG00005021932)
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077.i #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.d #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000156256 #29	ENSGT00390000009077.i #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.d #34	ENSGT00940000161310	ENSGT00390000007315
Ursus	ANCESTRAL SPECIES	198							ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000156256 #29	ENSGT00390000010067.h #32	ENSGT00390000009077.j.a.b #30
American black bear	MODERN SPECIES	795											CEP89 (ENSUAMG00000007283) #17	SLC7A9 (ENSUAMG00000007291) #18	TDRD12 (ENSUAMG00000007298) #19	NUDT19 (ENSUAMG00000007306) #20	RGS9BP (ENSUAMG00000007309) #21	ANKRD27 (ENSUAMG00000007312) #22	PDCD5 (ENSUAMG00000007315) #23	DPY19L3 (ENSUAMG00000007317) #24	ZNF507 (ENSUAMG00000007320) #25
Polar bear	MODERN SPECIES	155								SLC7A10 (ENSUMAG00000014779) #11	WDR88 (ENSUMAG00000014767) #13	GPATCH1 (ENSUMAG00000014645) #14	RHPN2 (ENSUMAG00000014602) #15	FAAP24 (ENSUMAG00000014600) #16	CEP89 (ENSUMAG00000014588) #17	SLC7A9 (ENSUMAG00000014340) #18	TDRD12 (ENSUMAG00000014314) #19	ANKRD27 (ENSUMAG00000013702) #22	PDCD5 (ENSUMAG00000013611) #23	DPY19L3 (ENSUMAG00000013572) #24	ZNF507 (ENSUMAG00000013564) #25	TSHZ3 (ENSUMAG00000013540) #26	ZNF536 (ENSUMAG00000013502) #27	URI1 (ENSUMAG00000013495) #28	ENSUMAG00000013491	CCNE1 (ENSUMAG00000013484) #29	ENSUMAG00000013482 #32	ENSUMAG00000013478 #30	ENSUMAG00000013469 #30
Giant Panda	MODERN SPECIES	3	CHST8 (ENSAMEG00000016999) #7	PEPD (ENSAMEG00000004320) #8	CEBPG (ENSAMEG00000018841) #9	CEBPA (ENSAMEG00000028966) #10	SLC7A10 (ENSAMEG00000008261) #11	LRP3 (ENSAMEG00000024584) #12	WDR88 (ENSAMEG00000008257) #13	GPATCH1 (ENSAMEG00000015575) #14	RHPN2 (ENSAMEG00000015528) #15	FAAP24 (ENSAMEG00000015524) #16	CEP89 (ENSAMEG00000015514) #17	SLC7A9 (ENSAMEG00000015459) #18	ENSAMEG00000009847	NUDT19 (ENSAMEG00000009842) #20	RGS9BP (ENSAMEG00000028432) #21	ANKRD27 (ENSAMEG00000009784) #22	PDCD5 (ENSAMEG00000009766) #23	DPY19L3 (ENSAMEG00000009748) #24	ZNF507 (ENSAMEG00000009742) #25	TSHZ3 (ENSAMEG00000009733) #26	ZNF536 (ENSAMEG00000009725) #27	URI1 (ENSAMEG00000009637) #28	ENSAMEG00000007309	CCNE1 (ENSAMEG00000009668) #29	ENSAMEG00000030806 #30	PLEKHF1 (ENSAMEG00000019032) #31	ENSAMEG00000003172 #32	ENSAMEG00000027559	VSTM2B (ENSAMEG00000027962) #33	ENSAMEG00000018330 #34	ENSAMEG00000018332
Mustelinae	ANCESTRAL SPECIES	49	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077.i #30	ENSGT00940000160728 #31
American mink	MODERN SPECIES	95	CHST8 (ENSNVIG00000019437) #7	PEPD (ENSNVIG00000019451) #8	CEBPG (ENSNVIG00000019517) #9	ENSNVIG00000019525 #10	SLC7A10 (ENSNVIG00000019536) #11	LRP3 (ENSNVIG00000019559) #12	WDR88 (ENSNVIG00000019568) #13	GPATCH1 (ENSNVIG00000019604) #14	RHPN2 (ENSNVIG00000019645) #15	FAAP24 (ENSNVIG00000019668) #16	CEP89 (ENSNVIG00000019683) #17	SLC7A9 (ENSNVIG00000019724) #18	ENSNVIG00000019776	NUDT19 (ENSNVIG00000019811) #20	RGS9BP (ENSNVIG00000019820) #21	ANKRD27 (ENSNVIG00000019825) #22	PDCD5 (ENSNVIG00000019867) #23	D19L3 (ENSNVIG00000019918) #24	ZNF507 (ENSNVIG00000019975) #25	TSHZ3 (ENSNVIG00000019995) #26	ZNF536 (ENSNVIG00000020006) #27	URI1 (ENSNVIG00000020030) #28	CCNE1 (ENSNVIG00000020059) #29	ENSNVIG00000020090 #30	PLEKHF1 (ENSNVIG00000020098) #31	ENSNVIG00000020103 #32	ENSNVIG00000020109 #30
Ferret	MODERN SPECIES	272	CHST8 (ENSMPUG00000007575) #7	PEPD (ENSMPUG00000007578) #8	CEBPG (ENSMPUG00000018937) #9	CEBPA (ENSMPUG00000007593) #10	SLC7A10 (ENSMPUG00000007598) #11	LRP3 (ENSMPUG00000007608) #12	WDR88 (ENSMPUG00000007632) #13	GPATCH1 (ENSMPUG00000007658) #14	RHPN2 (ENSMPUG00000007671) #15	FAAP24 (ENSMPUG00000007678) #16	CEP89 (ENSMPUG00000007682) #17	SLC7A9 (ENSMPUG00000007696) #18	TDRD12 (ENSMPUG00000007791) #19	NUDT19 (ENSMPUG00000007814) #20	RGS9BP (ENSMPUG00000018943) #21	ANKRD27 (ENSMPUG00000007821) #22	PDCD5 (ENSMPUG00000007931) #23	DPY19L3 (ENSMPUG00000007958) #24	ZNF507 (ENSMPUG00000007979) #25	TSHZ3 (ENSMPUG00000007986) #26	ZNF536 (ENSMPUG00000007989) #27	ENSMPUG00000007994	URI1 (ENSMPUG00000008002) #28	ENSMPUG00000008009	CCNE1 (ENSMPUG00000008012) #29	ENSMPUG00000008025 #30	PLEKHF1 (ENSMPUG00000018950) #31	ENSMPUG00000008033	ENSMPUG00000008041 #32	ENSMPUG00000008050	ENSMPUG00000008056 #30
Canidae	ANCESTRAL SPECIES	5	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00940000169413	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00950000186085	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Dingo	MODERN SPECIES	125	CHST8 (ENSCAFG00020019672) #7	PEPD (ENSCAFG00020019683) #8	CEBPG (ENSCAFG00020019687) #9	ENSCAFG00020019691 #10	SLC7A10 (ENSCAFG00020019693) #11	LRP3 (ENSCAFG00020019720) #12	GPATCH1 (ENSCAFG00020019731) #14	RHPN2 (ENSCAFG00020019742) #15	ENSCAFG00020019744 #16	ENSCAFG00020019747	CEP89 (ENSCAFG00020019752) #17	SLC7A9 (ENSCAFG00020019778) #18	TDRD12 (ENSCAFG00020019790) #19	NUDT19 (ENSCAFG00020019828) #20	RGS9BP (ENSCAFG00020019830) #21	ANKRD27 (ENSCAFG00020019831) #22	ENSCAFG00020019841 #23	DPY19L3 (ENSCAFG00020019865) #24	ZNF507 (ENSCAFG00020019878) #25	ENSCAFG00020019907	TSHZ3 (ENSCAFG00020019912) #26	ENSCAFG00020019927 #27	URI1 (ENSCAFG00020019949) #28	ENSCAFG00020019950	CCNE1 (ENSCAFG00020019952) #29	C19orf12 (ENSCAFG00020019957) #30	PLEKHF1 (ENSCAFG00020019960) #31	ENSCAFG00020019964 #32	VSTM2B (ENSCAFG00020019965) #33	UQCRFS1 (ENSCAFG00020019969) #34	ENSCAFG00020019987
Dog	MODERN SPECIES		CHST8 (ENSCAFG00845000098) #7	PEPD (ENSCAFG00845000128) #8	CEBPG (ENSCAFG00845000152) #9	SLC7A10 (ENSCAFG00845000168) #11	LRP3 (ENSCAFG00845000195) #12	WDR88 (ENSCAFG00845000209) #13	GPATCH1 (ENSCAFG00845000257) #14	RHPN2 (ENSCAFG00845000287) #15	FAAP24 (ENSCAFG00845000331) #16	CEP89 (ENSCAFG00845000371) #17	SLC7A9 (ENSCAFG00845000428) #18	TDRD12 (ENSCAFG00845000471) #19	NUDT19 (ENSCAFG00845000516) #20	ENSCAFG00845000530	RGS9BP (ENSCAFG00845000547) #21	ANKRD27 (ENSCAFG00845000589) #22	ENSCAFG00845000680 #23	DPY19L3 (ENSCAFG00845000789) #24	ZNF507 (ENSCAFG00845000880) #25	TSHZ3 (ENSCAFG00845000908) #26	ZNF536 (ENSCAFG00845000976) #27	URI1 (ENSCAFG00845001063) #28	CCNE1 (ENSCAFG00845001129) #29	C19orf12 (ENSCAFG00845001166) #30	PLEKHF1 (ENSCAFG00845001176) #31	POP4 (ENSCAFG00845001208) #32	ENSCAFG00845001253 #33	UQCRFS1 (ENSCAFG00845001274) #34
Red fox	MODERN SPECIES	80	KCTD15 (ENSVVUG00000016508)	CHST8 (ENSVVUG00000016516) #7	PEPD (ENSVVUG00000016526) #8	CEBPG (ENSVVUG00000016552) #9	CEBPA (ENSVVUG00000016555) #10	SLC7A10 (ENSVVUG00000016564) #11	ENSVVUG00000016565 #12	WDR88 (ENSVVUG00000016568) #13	GPATCH1 (ENSVVUG00000016572) #14	RHPN2 (ENSVVUG00000016587) #15	FAAP24 (ENSVVUG00000016604) #16	CEP89 (ENSVVUG00000016607) #17	SLC7A9 (ENSVVUG00000016626) #18	TDRD12 (ENSVVUG00000016637) #19	ENSVVUG00000016685 #21	ANKRD27 (ENSVVUG00000016689) #22	ENSVVUG00000016712 #23	DPY19L3 (ENSVVUG00000016714) #24	ZNF507 (ENSVVUG00000016742) #25	TSHZ3 (ENSVVUG00000016783) #26	ZNF536 (ENSVVUG00000016804) #27	URI1 (ENSVVUG00000016834) #28	CCNE1 (ENSVVUG00000016850) #29	CUNH19orf12 (ENSVVUG00000016868) #30	PLEKHF1 (ENSVVUG00000016871) #31	ENSVVUG00000016876 #32	ENSVVUG00000016882
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00940000153609.b.y.b	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00940000153609.b.y.b	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.b #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Tiger	MODERN SPECIES	547	KCTD15 (ENSPTIG00000002273)	CHST8 (ENSPTIG00000022019) #7	PEPD (ENSPTIG00000021640) #8	CEBPG (ENSPTIG00000005371) #9	ENSPTIG00000021511 #10	SLC7A10 (ENSPTIG00000021296) #11	ENSPTIG00000021208	WDR88 (ENSPTIG00000020346) #13	GPATCH1 (ENSPTIG00000019649) #14	RHPN2 (ENSPTIG00000018334) #15	FAAP24 (ENSPTIG00000017907) #16	ENSPTIG00000016120	CEP89 (ENSPTIG00000015712) #17	SLC7A9 (ENSPTIG00000011909) #18	ENSPTIG00000011285	ANKRD27 (ENSPTIG00000008026) #22	PDCD5 (ENSPTIG00000007586) #23	DPY19L3 (ENSPTIG00000005956) #24	ZNF507 (ENSPTIG00000000684) #25	TSHZ3 (ENSPTIG00000000029) #26	ZNF536 (ENSPTIG00000020883) #27	URI1 (ENSPTIG00000020114) #28	CCNE1 (ENSPTIG00000018249) #29	C19orf12 (ENSPTIG00000017039) #30	POP4 (ENSPTIG00000016598) #32	UQCRFS1 (ENSPTIG00000016425) #34	SHCBP1 (ENSPTIG00000015014)	VPS35 (ENSPTIG00000014402)	ORC6 (ENSPTIG00000013837)	ENSPTIG00000013190	C16orf87 (ENSPTIG00000012961)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00940000153609.b.y.b	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014.b #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
lion	MODERN SPECIES	15	ENSPLOG00000009938 #9	CEBPA (ENSPLOG00000009961) #10	SLC7A10 (ENSPLOG00000009985) #11	LRP3 (ENSPLOG00000010050) #12	ENSPLOG00000010083	GPATCH1 (ENSPLOG00000010167) #14	RHPN2 (ENSPLOG00000010204) #15	ENSPLOG00000010286	FAAP24 (ENSPLOG00000010325) #16	CEP89 (ENSPLOG00000010392) #17	ENSPLOG00000010558	SLC7A9 (ENSPLOG00000010593) #18	TDRD12 (ENSPLOG00000010712) #19	NUDT19 (ENSPLOG00000011007) #20	RGS9BP (ENSPLOG00000011038) #21	ANKRD27 (ENSPLOG00000011124) #22	PDCD5 (ENSPLOG00000011297) #23	DPY19L3 (ENSPLOG00000011402) #24	ZNF507 (ENSPLOG00000011521) #25	TSHZ3 (ENSPLOG00000011553) #26	ZNF536 (ENSPLOG00000011645) #27	URI1 (ENSPLOG00000011692) #28	CCNE1 (ENSPLOG00000011784) #29	C19orf12 (ENSPLOG00000011863) #30	PLEKHF1 (ENSPLOG00000011934) #31	POP4 (ENSPLOG00000011961) #32	VSTM2B (ENSPLOG00000012006) #33	UQCRFS1 (ENSPLOG00000012069) #34	SHCBP1 (ENSPLOG00000012099)	VPS35 (ENSPLOG00000012152)	ORC6 (ENSPLOG00000012223)
leopard	MODERN SPECIES	93	CEBPG (ENSPPRG00000022037) #9	CEBPA (ENSPPRG00000022055) #10	ENSPPRG00000022066	SLC7A10 (ENSPPRG00000010815) #11	LRP3 (ENSPPRG00000011026) #12	WDR88 (ENSPPRG00000015927) #13	GPATCH1 (ENSPPRG00000017245) #14	RHPN2 (ENSPPRG00000024049) #15	FAAP24 (ENSPPRG00000023535) #16	ENSPPRG00000023275	CEP89 (ENSPPRG00000022947) #17	SLC7A9 (ENSPPRG00000000104) #18	TDRD12 (ENSPPRG00000002389) #19	NUDT19 (ENSPPRG00000002593) #20	RGS9BP (ENSPPRG00000014110) #21	ANKRD27 (ENSPPRG00000003812) #22	PDCD5 (ENSPPRG00000004706) #23	DPY19L3 (ENSPPRG00000005613) #24	ENSPPRG00000006120	ZNF507 (ENSPPRG00000006540) #25	TSHZ3 (ENSPPRG00000006783) #26	ZNF536 (ENSPPRG00000007049) #27	URI1 (ENSPPRG00000007736) #28	CCNE1 (ENSPPRG00000008532) #29	C19orf12 (ENSPPRG00000009538) #30	PLEKHF1 (ENSPPRG00000014328) #31	POP4 (ENSPPRG00000010502) #32	VSTM2B (ENSPPRG00000010886) #33	ENSPPRG00000011021 #34
Cat	MODERN SPECIES	246	ENSFCAG00000045267 #9	CEBPA (ENSFCAG00000041373) #10	SLC7A10 (ENSFCAG00000014921) #11	LRP3 (ENSFCAG00000014920) #12	WDR88 (ENSFCAG00000030222) #13	GPATCH1 (ENSFCAG00000014917) #14	RHPN2 (ENSFCAG00000014916) #15	ENSFCAG00000033650	FAAP24 (ENSFCAG00000022497) #16	CEP89 (ENSFCAG00000014915) #17	ENSFCAG00000027289	SLC7A9 (ENSFCAG00000014914) #18	TDRD12 (ENSFCAG00000014913) #19	NUDT19 (ENSFCAG00000045759) #20	RGS9BP (ENSFCAG00000046519) #21	ANKRD27 (ENSFCAG00000002328) #22	PDCD5 (ENSFCAG00000002326) #23	DPY19L3 (ENSFCAG00000025600) #24	ZNF507 (ENSFCAG00000010663) #25	TSHZ3 (ENSFCAG00000004896) #26	ZNF536 (ENSFCAG00000014303) #27	ENSFCAG00000051573	URI1 (ENSFCAG00000022885) #28	CCNE1 (ENSFCAG00000001624) #29	C19orf12 (ENSFCAG00000034096) #30	PLEKHF1 (ENSFCAG00000024981) #31	POP4 (ENSFCAG00000001619) #32	VSTM2B (ENSFCAG00000011103) #33	UQCRFS1 (ENSFCAG00000027292) #34	SHCBP1 (ENSFCAG00000011798)	VPS35 (ENSFCAG00000001383)
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Equus	ANCESTRAL SPECIES	1	ENSGT00940000160676 #9	ENSGT00940000166016	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000158965.a.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT01100000266640	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Donkey	MODERN SPECIES	18	PEPD (ENSEASG00005021249) #8	ENSEASG00005033109	CEBPA (ENSEASG00005026752) #10	SLC7A10 (ENSEASG00005021240) #11	LRP3 (ENSEASG00005021238) #12	WDR88 (ENSEASG00005021235) #13	GPATCH1 (ENSEASG00005021162) #14	RHPN2 (ENSEASG00005021118) #15	FAAP24 (ENSEASG00005025311) #16	CEP89 (ENSEASG00005021099) #17	ENSEASG00005021086	SLC7A9 (ENSEASG00005021090) #18	TDRD12 (ENSEASG00005021053) #19	NUDT19 (ENSEASG00005033299) #20	RGS9BP (ENSEASG00005021029) #21	ANKRD27 (ENSEASG00005021017) #22	PDCD5 (ENSEASG00005026088) #23	ENSEASG00005033053	DPY19L3 (ENSEASG00005021008) #24	ENSEASG00005034115 #24	ZNF507 (ENSEASG00005020999) #25	TSHZ3 (ENSEASG00005020984) #26	ZNF536 (ENSEASG00005020978) #27	URI1 (ENSEASG00005020967) #28	CCNE1 (ENSEASG00005020958) #29	C19orf12 (ENSEASG00005033066) #30	PLEKHF1 (ENSEASG00005026468) #31	POP4 (ENSEASG00005024499) #32	VSTM2B (ENSEASG00005020939) #33	ENSEASG00005020935 #34	ENSEASG00005029138
Horse	MODERN SPECIES	1	CHST8 (ENSECAG00000008591) #7	PEPD (ENSECAG00000023698) #8	CEBPG (ENSECAG00000004879) #9	CEBPA (ENSECAG00000032515) #10	SLC7A10 (ENSECAG00000014510) #11	LRP3 (ENSECAG00000010409) #12	WDR88 (ENSECAG00000008371) #13	GPATCH1 (ENSECAG00000022743) #14	RHPN2 (ENSECAG00000010312) #15	FAAP24 (ENSECAG00000008757) #16	CEP89 (ENSECAG00000020513) #17	ENSECAG00000049232	SLC7A9 (ENSECAG00000009914) #18	TDRD12 (ENSECAG00000037516) #19	NUDT19 (ENSECAG00000045404) #20	ANKRD27 (ENSECAG00000019736) #22	PDCD5 (ENSECAG00000019406) #23	ENSECAG00000037924	DPY19L3 (ENSECAG00000000212) #24	ZNF507 (ENSECAG00000017052) #25	TSHZ3 (ENSECAG00000016274) #26	ENSECAG00000015459	ZNF536 (ENSECAG00000013732) #27	URI1 (ENSECAG00000007717) #28	CCNE1 (ENSECAG00000021289) #29	C10H19orf12 (ENSECAG00000021258) #30	PLEKHF1 (ENSECAG00000039032) #31	POP4 (ENSECAG00000020206) #32	VSTM2B (ENSECAG00000026831) #33	UQCRFS1 (ENSECAG00000004824) #34
Chiroptera	ANCESTRAL SPECIES	46	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797
Microbat	MODERN SPECIES	1101	ENSMLUG00000003368	KCTD15 (ENSMLUG00000003373)	PEPD (ENSMLUG00000005184) #8	CEBPG (ENSMLUG00000005181) #9	SLC7A10 (ENSMLUG00000012196) #11	LRP3 (ENSMLUG00000012184) #12	WDR88 (ENSMLUG00000012176) #13	GPATCH1 (ENSMLUG00000012161) #14	RHPN2 (ENSMLUG00000013292) #15	FAAP24 (ENSMLUG00000013287) #16	CEP89 (ENSMLUG00000013276) #17	SLC7A9 (ENSMLUG00000010760) #18	TDRD12 (ENSMLUG00000010694) #19	NUDT19 (ENSMLUG00000024776) #20	RGS9BP (ENSMLUG00000007196) #21	ANKRD27 (ENSMLUG00000007152) #22	PDCD5 (ENSMLUG00000007141) #23	RPL13 (ENSMLUG00000010950)	ENSMLUG00000022465
Greater horseshoe bat	MODERN SPECIES	6	KCTD15 (ENSRFEG00010006447)	ENSRFEG00010006421	CHST8 (ENSRFEG00010006394) #7	PEPD (ENSRFEG00010006273) #8	CEBPG (ENSRFEG00010006215) #9	CEBPA (ENSRFEG00010006198) #10	SLC7A10 (ENSRFEG00010006133) #11	LRP3 (ENSRFEG00010006084) #12	ENSRFEG00010005895 #14	RHPN2 (ENSRFEG00010005821) #15	FAAP24 (ENSRFEG00010005778) #16	CEP89 (ENSRFEG00010005716) #17	SLC7A9 (ENSRFEG00010005658) #18	NUDT19 (ENSRFEG00010005577) #20	RGS9BP (ENSRFEG00010005537) #21	ANKRD27 (ENSRFEG00010005470) #22	PDCD5 (ENSRFEG00010005420) #23	RPL13 (ENSRFEG00010005364)	ENSRFEG00010005337	SPG7 (ENSRFEG00010017274)	ANKRD11 (ENSRFEG00010017028)	SLC22A31 (ENSRFEG00010016932)	CDH15 (ENSRFEG00010016864)	ACSF3 (ENSRFEG00010016800)	CBFA2T3 (ENSRFEG00010016729)	PABPN1L (ENSRFEG00010016538)	TRAPPC2L (ENSRFEG00010016434)	GALNS (ENSRFEG00010016413)	APRT (ENSRFEG00010016234)	CDT1 (ENSRFEG00010015959)	ENSRFEG00010015452
Megabat	MODERN SPECIES	3821															NUDT19 (ENSPVAG00000012509) #20	ANKRD27 (ENSPVAG00000012506) #22	ENSPVAG00000012505
Eulipotyphla	ANCESTRAL SPECIES	2075																ENSGT00940000157021 #22	ENSGT00390000011085 #23
Hedgehog	MODERN SPECIES	862																ANKRD27 (ENSEEUG00000001191) #22	PDCD5 (ENSEEUG00000001182) #23
Common shrew	MODERN SPECIES	465																ENSSARG00000003153 #22	ENSSARG00000003120 #23
Atlantogenata	ANCESTRAL SPECIES	24							ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Afrotheria	ANCESTRAL SPECIES	44	ENSGT00940000154415	ENSGT00940000159496	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Afrotheria_a	ANCESTRAL SPECIES	43	ENSGT00940000154415	ENSGT00940000159496	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00390000007315	ENSGT00390000007370
Elephant	MODERN SPECIES	393	KCTD15 (ENSLAFG00000014114)	CHST8 (ENSLAFG00000013232) #7	PEPD (ENSLAFG00000021407) #8	CEBPG (ENSLAFG00000017998) #9	CEBPA (ENSLAFG00000030435) #10	LRP3 (ENSLAFG00000027575) #12	WDR88 (ENSLAFG00000013599) #13	GPATCH1 (ENSLAFG00000013589) #14	RHPN2 (ENSLAFG00000013586) #15	FAAP24 (ENSLAFG00000006401) #16	CEP89 (ENSLAFG00000006394) #17	SLC7A9 (ENSLAFG00000008707) #18	TDRD12 (ENSLAFG00000008698) #19	NUDT19 (ENSLAFG00000032048) #20	RGS9BP (ENSLAFG00000008696) #21	ANKRD27 (ENSLAFG00000013926) #22	PDCD5 (ENSLAFG00000013922) #23	DPY19L3 (ENSLAFG00000011171) #24	ZNF507 (ENSLAFG00000018078) #25	TSHZ3 (ENSLAFG00000000905) #26	ZNF536 (ENSLAFG00000017731) #27	URI1 (ENSLAFG00000014350) #28	CCNE1 (ENSLAFG00000011876) #29	C19orf12 (ENSLAFG00000021383) #30	PLEKHF1 (ENSLAFG00000030466) #31	POP4 (ENSLAFG00000000084) #32	VSTM2B (ENSLAFG00000011112) #33	UQCRFS1 (ENSLAFG00000002797) #34	ENSLAFG00000029634	SHCBP1 (ENSLAFG00000030123)	VPS35 (ENSLAFG00000001705)
Hyrax	MODERN SPECIES	592																ANKRD27 (ENSPCAG00000005378) #22	ENSPCAG00000005319
Tenrec	MODERN SPECIES	804																ENSETEG00000000893 #22	PDCD5 (ENSETEG00000000891) #23
Xenarthra	ANCESTRAL SPECIES	275							ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26
Sloth	MODERN SPECIES	658																ANKRD27 (ENSCHOG00000007920) #22	PDCD5 (ENSCHOG00000007910) #23
Armadillo	MODERN SPECIES	3335						WDR88 (ENSDNOG00000019863) #13	ENSDNOG00000042043	GPATCH1 (ENSDNOG00000005291) #14	RHPN2 (ENSDNOG00000014140) #15	ENSDNOG00000014134 #16	CEP89 (ENSDNOG00000045063) #17	SLC7A9 (ENSDNOG00000044029) #18	TDRD12 (ENSDNOG00000017244) #19	NUDT19 (ENSDNOG00000044256) #20	RGS9BP (ENSDNOG00000004034) #21	ANKRD27 (ENSDNOG00000004014) #22	PDCD5 (ENSDNOG00000004010) #23	ENSDNOG00000033818	DPY19L3 (ENSDNOG00000009405) #24	ZNF507 (ENSDNOG00000009394) #25	TSHZ3 (ENSDNOG00000013222) #26
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.n #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.n #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085.n #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Diprotodontia_a	DUPLICATION
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021.e #22	ENSGT00390000011085.n #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Common wonbat	MODERN SPECIES	1024	ENSVURG00010018092 #8	ENSVURG00010018099 #9	ENSVURG00010018106 #10	ENSVURG00010018112 #11	ENSVURG00010018123 #12	ENSVURG00010018129 #13	ENSVURG00010000118 #14	ENSVURG00010000158 #15	ENSVURG00010000178 #16	ENSVURG00010000219 #17	ENSVURG00010000377	ENSVURG00010000392 #18	ENSVURG00010000438 #19	ENSVURG00010000492 #20	ENSVURG00010000499 #21	ENSVURG00010000508 #22	ENSVURG00010000532 #22	ENSVURG00010000572 #23	ENSVURG00010000647 #24	ENSVURG00010000680 #25	ENSVURG00010000722	ENSVURG00010000793
koala	MODERN SPECIES	19	CHST8 (ENSPCIG00000023610) #7	PEPD (ENSPCIG00000023598) #8	CEBPG (ENSPCIG00000023592) #9	CEBPA (ENSPCIG00000023590) #10	SLC7A10 (ENSPCIG00000009596) #11	LRP3 (ENSPCIG00000009598) #12	ENSPCIG00000021005 #13	GPATCH1 (ENSPCIG00000021003) #14	RHPN2 (ENSPCIG00000020997) #15	FAAP24 (ENSPCIG00000021002) #16	ENSPCIG00000021000	SLC7A9 (ENSPCIG00000020995) #18	TDRD12 (ENSPCIG00000020993) #19	ENSPCIG00000020992 #20	RGS9BP (ENSPCIG00000020990) #21	ANKRD27 (ENSPCIG00000020984) #22	ENSPCIG00000020982 #23	DPY19L3 (ENSPCIG00000000890) #24	ZNF507 (ENSPCIG00000001104) #25	ENSPCIG00000011864	TSHZ3 (ENSPCIG00000014075) #26	ENSPCIG00000035300	ZNF536 (ENSPCIG00000017559) #27	URI1 (ENSPCIG00000017561) #28	ENSPCIG00000017562	ENSPCIG00000017564 #29	C19orf12 (ENSPCIG00000034142) #30	PLEKHF1 (ENSPCIG00000024734) #31	POP4 (ENSPCIG00000024738) #32	VSTM2B (ENSPCIG00000024740) #33	UQCRFS1 (ENSPCIG00000024743) #34
Diprotodontia_a	ANCESTRAL SPECIES	142																ENSGT00940000157021.f #22	ENSGT00390000011085.m #23
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1024	ENSVURG00010018099 #9	ENSVURG00010018106 #10	ENSVURG00010018112 #11	ENSVURG00010018123 #12	ENSVURG00010018129 #13	ENSVURG00010000118 #14	ENSVURG00010000158 #15	ENSVURG00010000178 #16	ENSVURG00010000219 #17	ENSVURG00010000377	ENSVURG00010000392 #18	ENSVURG00010000438 #19	ENSVURG00010000492 #20	ENSVURG00010000499 #21	ENSVURG00010000508 #22	ENSVURG00010000532 #22	ENSVURG00010000572 #23	ENSVURG00010000647 #24	ENSVURG00010000680 #25	ENSVURG00010000722	ENSVURG00010000793
Common wonbat	MODERN SPECIES	1024	ENSVURG00010010900 #8	ENSVURG00010010912 #9	ENSVURG00010010917 #10	ENSVURG00010010935 #11	ENSVURG00010010960 #12	ENSVURG00010010985 #13	ENSVURG00010011001 #14	ENSVURG00010011018 #15	ENSVURG00010011034 #16	ENSVURG00010011054 #17	ENSVURG00010011149	ENSVURG00010011153 #18	ENSVURG00010011177 #19	ENSVURG00010011228 #20	ENSVURG00010011234 #21	ENSVURG00010011246 #22	ENSVURG00010011291 #23	ENSVURG00010011334 #24	ENSVURG00010011340 #25	ENSVURG00010011374	ENSVURG00010011385	TSHZ3 (ENSVURG00010011394) #26	ZNF536 (ENSVURG00010011415) #27	URI1 (ENSVURG00010011452) #28	CCNE1 (ENSVURG00010011492) #29	C19orf12 (ENSVURG00010012490) #30	PLEKHF1 (ENSVURG00010012501) #31	POP4 (ENSVURG00010012509) #32	VSTM2B (ENSVURG00010012523) #33	UQCRFS1 (ENSVURG00010012533) #34	SHCBP1 (ENSVURG00010012550)
Wallaby	MODERN SPECIES	1443																ENSMEUG00000002770 #22
Tasmanian devil	MODERN SPECIES	1	CHST8 (ENSSHAG00000011737) #7	PEPD (ENSSHAG00000022416) #8	CEBPG (ENSSHAG00000032373) #9	CEBPA (ENSSHAG00000032313) #10	SLC7A10 (ENSSHAG00000015445) #11	LRP3 (ENSSHAG00000015576) #12	ENSSHAG00000023131 #13	GPATCH1 (ENSSHAG00000016016) #14	ENSSHAG00000021461	RHPN2 (ENSSHAG00000016222) #15	FAAP24 (ENSSHAG00000016372) #16	CEP89 (ENSSHAG00000026537) #17	ENSSHAG00000026384	SLC7A9 (ENSSHAG00000000814) #18	TDRD12 (ENSSHAG00000022785) #19	ANKRD27 (ENSSHAG00000005784) #22	RGS9BP (ENSSHAG00000005364) #21	PDCD5 (ENSSHAG00000029718) #23	DPY19L3 (ENSSHAG00000009113) #24	ZNF507 (ENSSHAG00000010139) #25	TSHZ3 (ENSSHAG00000006124) #26	ZNF536 (ENSSHAG00000013353) #27	URI1 (ENSSHAG00000015726) #28	C19orf12 (ENSSHAG00000028773) #30	ENSSHAG00000016239 #29	ENSSHAG00000022898 #31	POP4 (ENSSHAG00000028432) #32	ENSSHAG00000024076 #33	ENSSHAG00000017804 #34	ENSSHAG00000024152	ENSSHAG00000018876
Opossum	MODERN SPECIES		PEPD (ENSMODG00000012139) #8	CEBPA (ENSMODG00000012162) #10	SLC7A10 (ENSMODG00000012202) #11	LRP3 (ENSMODG00000012209) #12	GPATCH1 (ENSMODG00000012226) #14	ENSMODG00000039982	RHPN2 (ENSMODG00000012240) #15	FAAP24 (ENSMODG00000012243) #16	CEP89 (ENSMODG00000012246) #17	ENSMODG00000050814	SLC7A9 (ENSMODG00000012256) #18	TDRD12 (ENSMODG00000012286) #19	ENSMODG00000012288 #20	ENSMODG00000038175	RGS9BP (ENSMODG00000023490) #21	ANKRD27 (ENSMODG00000012322) #22	ENSMODG00000012326 #23	DPY19L3 (ENSMODG00000012361) #24	ENSMODG00000028628	ZNF507 (ENSMODG00000012367) #25	TSHZ3 (ENSMODG00000012390) #26	ZNF536 (ENSMODG00000012653) #27	URI1 (ENSMODG00000012675) #28	ENSMODG00000012680 #29	C19orf12 (ENSMODG00000012696) #30	PLEKHF1 (ENSMODG00000023488) #31	POP4 (ENSMODG00000029406) #32	ENSMODG00000037821 #33	ENSMODG00000012703 #33	ENSMODG00000038837	UQCRFS1 (ENSMODG00000012709) #34
Platypus	MODERN SPECIES	2	PEPD (ENSOANG00000008142) #8	CEBPG (ENSOANG00000008143) #9	CEBPA (ENSOANG00000045999) #10	SLC7A10 (ENSOANG00000012737) #11	LRP3 (ENSOANG00000012736) #12	ENSOANG00000050528 #13	GPATCH1 (ENSOANG00000012732) #14	RHPN2 (ENSOANG00000012731) #15	FAAP24 (ENSOANG00000038390) #16	ENSOANG00000012729	CEP89 (ENSOANG00000012728) #17	SLC7A9 (ENSOANG00000012726) #18	TDRD12 (ENSOANG00000029442) #19	ENSOANG00000012725 #20	ENSOANG00000049435	ANKRD27 (ENSOANG00000012724) #22	PDCD5 (ENSOANG00000040196) #23	ENSOANG00000037295	ZNF507 (ENSOANG00000002786) #25	TSHZ3 (ENSOANG00000002785) #26	ZNF536 (ENSOANG00000002991) #27	ENSOANG00000002990 #28	CCNE1 (ENSOANG00000014148) #29	ENSOANG00000000737	C19orf12 (ENSOANG00000044469) #30	PLEKHF1 (ENSOANG00000002290) #31	POP4 (ENSOANG00000020512) #32	ENSOANG00000051058 #33	UQCRFS1 (ENSOANG00000002291) #34	SHCBP1 (ENSOANG00000005202)	VPS35 (ENSOANG00000002249)
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Archosauria	ANCESTRAL SPECIES	14	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291.f #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Aves	ANCESTRAL SPECIES	22	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291.f #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Neognathae	ANCESTRAL SPECIES	13	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291.f #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291.f #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Anatidae	ANCESTRAL SPECIES	17	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291.f #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Pink-footed goose	MODERN SPECIES	505															RGS9BP (ENSABRG00000010931) #21	ANKRD27 (ENSABRG00000010934) #22	PDCD5 (ENSABRG00000010946) #23	ENSABRG00000010977
Duck	MODERN SPECIES	3														TDRD12 (ENSAPLG00000011417) #19	NUDT19 (ENSAPLG00000011800) #20	ANKRD27 (ENSAPLG00000011807) #22	PDCD5 (ENSAPLG00000026487) #23	DPY19L3 (ENSAPLG00000012920) #24	ZNF507 (ENSAPLG00000013158) #25	TSHZ3 (ENSAPLG00000011634) #26	ZNF536 (ENSAPLG00000013219) #27	URI1 (ENSAPLG00000017568) #28	CCNE1 (ENSAPLG00000013739) #29	ENSAPLG00000013924	C19orf12 (ENSAPLG00000019442) #30	PLEKHF1 (ENSAPLG00000011645) #31	POP4 (ENSAPLG00000014051) #32	UQCRFS1 (ENSAPLG00000002275) #34	SHCBP1 (ENSAPLG00000008932)	ENSAPLG00000020084	VPS35 (ENSAPLG00000009261)
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291.f #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a.e #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077.lb #30	ENSGT00390000009077.mb.a #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291.f #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00940000166448	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a.e #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077.lb #30	ENSGT00390000009077.mb.a #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34
Chicken	MODERN SPECIES	2	PEPD (ENSGALG00010025200) #8	CEBPG (ENSGALG00010025114) #9	CEBPA (ENSGALG00010025039) #10	SLC7A10 (ENSGALG00010025010) #11	LRP3 (ENSGALG00010024977) #12	WDR88 (ENSGALG00010024895) #13	GPATCH1 (ENSGALG00010025949) #14	RHPN2 (ENSGALG00010024878) #15	FAAP24 (ENSGALG00010024868) #16	CEP89 (ENSGALG00010024852) #17	SLC7A9 (ENSGALG00010024831) #18	ENSGALG00010024827 #19	ENSGALG00010025926	NUDT19 (ENSGALG00010024820) #20	RGS9BP (ENSGALG00010025919) #21	ANKRD27 (ENSGALG00010024806) #22	PDCD5 (ENSGALG00010024786) #23	ENSGALG00010024684	DPY19L3 (ENSGALG00010024657) #24	ZNF507 (ENSGALG00010024638) #25	TSHZ3 (ENSGALG00010024626) #26	ZNF536 (ENSGALG00010024544) #27	URI1 (ENSGALG00010024536) #28	CCNE1 (ENSGALG00010024008) #29	ENSGALG00010025899	C19orf12 (ENSGALG00010023993) #30	ENSGALG00010023981 #30	ENSGALG00010023972 #30	PLEKHF1 (ENSGALG00010023954) #31	POP4 (ENSGALG00010023896) #32	VSTM2B (ENSGALG00010023881) #33
Turkey	MODERN SPECIES	4	MYLK3 (ENSMGAG00000005260)	ENSMGAG00000018317	ENSMGAG00000005307	ENSMGAG00000005283	ENSMGAG00000015592 #34	ENSMGAG00000005337 #32	ENSMGAG00000015596 #31	ENSMGAG00000018069 #30	ENSMGAG00000005421 #28	ENSMGAG00000022714 #27	ENSMGAG00000005440 #27	ENSMGAG00000015601 #26	ENSMGAG00000005461 #25	DPY19L3 (ENSMGAG00000005481) #24	ENSMGAG00000005527	ENSMGAG00000005555 #22	ENSMGAG00000005543 #23	ENSMGAG00000017074	ENSMGAG00000005608 #20	ENSMGAG00000005650 #18	ENSMGAG00000005691 #17	ENSMGAG00000005724 #16	ENSMGAG00000005729 #15	ENSMGAG00000019428 #14	ENSMGAG00000005775 #14	ENSMGAG00000005857 #12	SLC7A10 (ENSMGAG00000005866) #11	ENSMGAG00000022220	ENSMGAG00000005946 #8	ENSMGAG00000015603 #9	CHST8 (ENSMGAG00000005979) #7
Japanese quail	MODERN SPECIES	2	KCTD15 (ENSCJPG00005014623)	CHST8 (ENSCJPG00005014622) #7	PEPD (ENSCJPG00005014621) #8	CEBPG (ENSCJPG00005014620) #9	CEBPA (ENSCJPG00005014618) #10	SLC7A10 (ENSCJPG00005014449) #11	LRP3 (ENSCJPG00005014448) #12	GPATCH1 (ENSCJPG00005014447) #14	RHPN2 (ENSCJPG00005014446) #15	FAAP24 (ENSCJPG00005014445) #16	CEP89 (ENSCJPG00005014444) #17	SLC7A9 (ENSCJPG00005014443) #18	TDRD12 (ENSCJPG00005014440) #19	NUDT19 (ENSCJPG00005014439) #20	RGS9BP (ENSCJPG00005014438) #21	ANKRD27 (ENSCJPG00005014437) #22	PDCD5 (ENSCJPG00005014436) #23	ENSCJPG00005014435	DPY19L3 (ENSCJPG00005014415) #24	ZNF507 (ENSCJPG00005014414) #25	TSHZ3 (ENSCJPG00005014409) #26	ZNF536 (ENSCJPG00005014399) #27	URI1 (ENSCJPG00005014395) #28	CCNE1 (ENSCJPG00005014393) #29	ENSCJPG00005014392	ENSCJPG00005014391 #30	ENSCJPG00005014390	ENSCJPG00005014389 #30	PLEKHF1 (ENSCJPG00005014388) #31	POP4 (ENSCJPG00005014386) #32	VSTM2B (ENSCJPG00005014385) #33
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00940000153691.a.b	ENSGT00940000157553	ENSGT00940000165319	ENSGT00940000159631	ENSGT00940000159184	ENSGT00950000183186.B.a	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Great tit	MODERN SPECIES	2	CEBPA (ENSPMJG00000003606) #10	SLC7A10 (ENSPMJG00000003594) #11	LRP3 (ENSPMJG00000003592) #12	GPATCH1 (ENSPMJG00000003568) #14	RHPN2 (ENSPMJG00000003564) #15	FAAP24 (ENSPMJG00000003563) #16	CEP89 (ENSPMJG00000003559) #17	SLC7A9 (ENSPMJG00000003558) #18	CDH8 (ENSPMJG00000003533)	ADAMTS18 (ENSPMJG00000003468)	VAT1L (ENSPMJG00000003459)	CLEC3A (ENSPMJG00000003458)	TDRD12 (ENSPMJG00000003450) #19	NUDT19 (ENSPMJG00000003448) #20	RGS9BP (ENSPMJG00000003445) #21	ANKRD27 (ENSPMJG00000003422) #22	PDCD5 (ENSPMJG00000003396) #23	ENSPMJG00000003375	DPY19L3 (ENSPMJG00000003354) #24	ZNF507 (ENSPMJG00000003342) #25	TSHZ3 (ENSPMJG00000003314) #26	ZNF536 (ENSPMJG00000003297) #27	URI1 (ENSPMJG00000003203) #28	CCNE1 (ENSPMJG00000003196) #29	ENSPMJG00000003193	ENSPMJG00000003083 #30	PLEKHF1 (ENSPMJG00000003081) #31	POP4 (ENSPMJG00000003079) #32	VSTM2B (ENSPMJG00000003075) #33	UQCRFS1 (ENSPMJG00000003016) #34	SHCBP1 (ENSPMJG00000003015)
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00940000153691.a.b	ENSGT00940000157553	ENSGT00940000165319	ENSGT00940000163228.d	ENSGT00940000159631	ENSGT00940000159184	ENSGT00950000183186.B.a	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Flycatcher	MODERN SPECIES	2	RHPN2 (ENSFALG00000000266) #15	FAAP24 (ENSFALG00000000267) #16	CEP89 (ENSFALG00000000269) #17	SLC7A9 (ENSFALG00000000274) #18	ENSFALG00000025065	ENSFALG00000000289	ADAMTS18 (ENSFALG00000000306)	ENSFALG00000000308	ENSFALG00000024155	ENSFALG00000027861	VAT1L (ENSFALG00000000264)	CLEC3A (ENSFALG00000000261)	TDRD12 (ENSFALG00000000259) #19	ENSFALG00000023906 #20	RGS9BP (ENSFALG00000014197) #21	ANKRD27 (ENSFALG00000000253) #22	PDCD5 (ENSFALG00000000250) #23	ENSFALG00000000241	DPY19L3 (ENSFALG00000000238) #24	ZNF507 (ENSFALG00000000237) #25	TSHZ3 (ENSFALG00000014186) #26	ZNF536 (ENSFALG00000000233) #27	URI1 (ENSFALG00000000228) #28	CCNE1 (ENSFALG00000000223) #29	ENSFALG00000000218	C19orf12 (ENSFALG00000000215) #30	PLEKHF1 (ENSFALG00000014180) #31	POP4 (ENSFALG00000000206) #32	UQCRFS1 (ENSFALG00000014175) #34	ENSFALG00000028734	ENSFALG00000000193
Passeriformes_g	ANCESTRAL SPECIES	17							ENSGT00940000159631	ENSGT00940000163228.d	ENSGT00940000165319	ENSGT00940000157553	ENSGT00940000159184	ENSGT00950000183186.B.a	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728.c #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Passeroidea	ANCESTRAL SPECIES	17							ENSGT00940000159631	ENSGT00940000163228.d	ENSGT00940000165319	ENSGT00940000157553	ENSGT00940000159184	ENSGT00950000183186.B.a	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728.c #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Common canary	MODERN SPECIES	14							CDH8 (ENSSCAG00000003827)	ENSSCAG00000003841	ENSSCAG00000003845	ADAMTS18 (ENSSCAG00000003850)	ENSSCAG00000003863	VAT1L (ENSSCAG00000003922)	CLEC3A (ENSSCAG00000003931)	TDRD12 (ENSSCAG00000003944) #19	NUDT19 (ENSSCAG00000003973) #20	ANKRD27 (ENSSCAG00000003985) #22	RGS9BP (ENSSCAG00000004022) #21	PDCD5 (ENSSCAG00000004028) #23	ENSSCAG00000004044	DPY19L3 (ENSSCAG00000004072) #24	ZNF507 (ENSSCAG00000004080) #25	TSHZ3 (ENSSCAG00000004094) #26	ZNF536 (ENSSCAG00000004100) #27	URI1 (ENSSCAG00000004113) #28	CCNE1 (ENSSCAG00000004126) #29	ENSSCAG00000004133	C19orf12 (ENSSCAG00000004139) #30	PLEKHF1 (ENSSCAG00000004145) #31	POP4 (ENSSCAG00000004148) #32	UQCRFS1 (ENSSCAG00000004159) #34	SHCBP1 (ENSSCAG00000004167)
Zebra finch	MODERN SPECIES	2	ENSTGUG00000009256	SLC7A9 (ENSTGUG00000009229) #18	CEP89 (ENSTGUG00000009207) #17	FAAP24 (ENSTGUG00000009200) #16	NUDT7 (ENSTGUG00000021245)	ENSTGUG00000015052	ENSTGUG00000009156	ADAMTS18 (ENSTGUG00000009163)	ENSTGUG00000009150	VAT1L (ENSTGUG00000009137)	CLEC3A (ENSTGUG00000009128)	TDRD12 (ENSTGUG00000009121) #19	NUDT19 (ENSTGUG00000029501) #20	RGS9BP (ENSTGUG00000009112) #21	ENSTGUG00000027708	ANKRD27 (ENSTGUG00000009084) #22	PDCD5 (ENSTGUG00000021896) #23	ENSTGUG00000009048	DPY19L3 (ENSTGUG00000009029) #24	ZNF507 (ENSTGUG00000009020) #25	ENSTGUG00000021324	TSHZ3 (ENSTGUG00000009016) #26	ZNF536 (ENSTGUG00000009013) #27	URI1 (ENSTGUG00000008994) #28	CCNE1 (ENSTGUG00000008979) #29	ENSTGUG00000008970 #31	ENSTGUG00000026281 #31	C19orf12 (ENSTGUG00000029524) #30	ENSTGUG00000029697 #31	POP4 (ENSTGUG00000008953) #32	VSTM2B (ENSTGUG00000008950) #33
Medium ground finch	MODERN SPECIES	111													VAT1L (ENSGFOG00000007207)	CLEC3A (ENSGFOG00000007213)	TDRD12 (ENSGFOG00000007226) #19	ANKRD27 (ENSGFOG00000007265) #22	RGS9BP (ENSGFOG00000007285) #21	PDCD5 (ENSGFOG00000007289) #23	ENSGFOG00000007300	DPY19L3 (ENSGFOG00000007325) #24	ZNF507 (ENSGFOG00000007342) #25	TSHZ3 (ENSGFOG00000007350) #26	ZNF536 (ENSGFOG00000007358) #27	URI1 (ENSGFOG00000007369) #28	CCNE1 (ENSGFOG00000007388) #29	ENSGFOG00000007409	C19orf12 (ENSGFOG00000007418) #30	PLEKHF1 (ENSGFOG00000007424) #31	POP4 (ENSGFOG00000007429) #32	UQCRFS1 (ENSGFOG00000007435) #34	SHCBP1 (ENSGFOG00000007436)
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00940000159100.f #7	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Kakapo	MODERN SPECIES	19	ENSSHBG00005011294	ENSSHBG00005011313 #7	PEPD (ENSSHBG00005011339) #8	ENSSHBG00005011361 #9	ENSSHBG00005011375 #10	ENSSHBG00005011415 #11	ENSSHBG00005011571 #12	GPATCH1 (ENSSHBG00005011591) #14	ENSSHBG00005011625 #15	ENSSHBG00005011638 #15	ENSSHBG00005011660 #16	CEP89 (ENSSHBG00005011674) #17	SLC7A9 (ENSSHBG00005011804) #18	TDRD12 (ENSSHBG00005014145) #19	NUDT19 (ENSSHBG00005014202) #20	ANKRD27 (ENSSHBG00005014210) #22	RGS9BP (ENSSHBG00005014236) #21	PDCD5 (ENSSHBG00005014245) #23	ENSSHBG00005014261	DPY19L3 (ENSSHBG00005014311) #24	ENSSHBG00005014347 #25	ENSSHBG00005000156 #26	ENSSHBG00005001350	ENSSHBG00005001409 #27	ENSSHBG00005001466 #28	ENSSHBG00005001492 #29	ENSSHBG00005001524	ENSSHBG00005001540 #30	ENSSHBG00005001553 #30	ENSSHBG00005001570 #31	LONP2 (ENSSHBG00005001588)
Golden eagle	MODERN SPECIES	25	PEPD (ENSACCG00020001123) #8	CEBPG (ENSACCG00020001148) #9	CEBPA (ENSACCG00020001161) #10	SLC7A10 (ENSACCG00020001170) #11	LRP3 (ENSACCG00020001206) #12	GPATCH1 (ENSACCG00020001248) #14	RHPN2 (ENSACCG00020001302) #15	FAAP24 (ENSACCG00020001327) #16	ENSACCG00020001338	CEP89 (ENSACCG00020001367) #17	ENSACCG00020001387	SLC7A9 (ENSACCG00020001411) #18	TDRD12 (ENSACCG00020001464) #19	NUDT19 (ENSACCG00020001499) #20	RGS9BP (ENSACCG00020001512) #21	ANKRD27 (ENSACCG00020001560) #22	PDCD5 (ENSACCG00020001650) #23	ENSACCG00020001678	DPY19L3 (ENSACCG00020001720) #24	ZNF507 (ENSACCG00020001759) #25	TSHZ3 (ENSACCG00020001775) #26	ZNF536 (ENSACCG00020001787) #27	URI1 (ENSACCG00020001806) #28	CCNE1 (ENSACCG00020001833) #29	ENSACCG00020001902	C19orf12 (ENSACCG00020001945) #30	PLEKHF1 (ENSACCG00020001956) #31	POP4 (ENSACCG00020001971) #32	VSTM2B (ENSACCG00020001990) #33	UQCRFS1 (ENSACCG00020002004) #34	ENSACCG00020002013
African ostrich	MODERN SPECIES	737	KCTD15 (ENSSCUG00000012101)	CHST8 (ENSSCUG00000012098) #7	PEPD (ENSSCUG00000012089) #8	CEBPG (ENSSCUG00000012082) #9	SLC7A10 (ENSSCUG00000012058) #11	LRP3 (ENSSCUG00000012050) #12	GPATCH1 (ENSSCUG00000012047) #14	RHPN2 (ENSSCUG00000012043) #15	FAAP24 (ENSSCUG00000012036) #16	ENSSCUG00000012035	CEP89 (ENSSCUG00000012031) #17	SLC7A9 (ENSSCUG00000011997) #18	TDRD12 (ENSSCUG00000011970) #19	ENSSCUG00000011968 #20	RGS9BP (ENSSCUG00000011966) #21	ANKRD27 (ENSSCUG00000011958) #22	PDCD5 (ENSSCUG00000011956) #23	DPY19L3 (ENSSCUG00000011954) #24	ZNF507 (ENSSCUG00000011953) #25	TSHZ3 (ENSSCUG00000011945) #26	ZNF536 (ENSSCUG00000011942) #27	URI1 (ENSSCUG00000011931) #28	CCNE1 (ENSSCUG00000011925) #29	ENSSCUG00000011921	PLEKHF1 (ENSSCUG00000011920) #31	POP4 (ENSSCUG00000011917) #32	UQCRFS1 (ENSSCUG00000011911) #34	SHCBP1 (ENSSCUG00000011909)	ENSSCUG00000011904	VPS35 (ENSSCUG00000011901)	ORC6 (ENSSCUG00000011895)
Australian saltwater crocodile	MODERN SPECIES	35	SLC7A10 (ENSCPRG00005004357) #11	LRP3 (ENSCPRG00005004351) #12	WDR88 (ENSCPRG00005004346) #13	GPATCH1 (ENSCPRG00005004341) #14	RHPN2 (ENSCPRG00005004327) #15	FAAP24 (ENSCPRG00005004323) #16	ENSCPRG00005004318	ENSCPRG00005004315	ENSCPRG00005004311	CEP89 (ENSCPRG00005004305) #17	SLC7A9 (ENSCPRG00005004298) #18	ENSCPRG00005004295	TDRD12 (ENSCPRG00005004257) #19	NUDT19 (ENSCPRG00005004246) #20	RGS9BP (ENSCPRG00005004245) #21	ANKRD27 (ENSCPRG00005004220) #22	PDCD5 (ENSCPRG00005004211) #23	ENSCPRG00005004190	DPY19L3 (ENSCPRG00005004159) #24	ZNF507 (ENSCPRG00005004153) #25	TSHZ3 (ENSCPRG00005004136) #26	ZNF536 (ENSCPRG00005004130) #27	URI1 (ENSCPRG00005004124) #28	CCNE1 (ENSCPRG00005004111) #29	ENSCPRG00005004104	C19orf12 (ENSCPRG00005004100) #30	PLEKHF1 (ENSCPRG00005004098) #31	POP4 (ENSCPRG00005004092) #32	UQCRFS1 (ENSCPRG00005004086) #34	ENSCPRG00005004073	SHCBP1 (ENSCPRG00005004067)
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021.a #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Emydidae	ANCESTRAL SPECIES	33	ENSGT00940000153657.B #8	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021.a #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Three-toed box turtle	MODERN SPECIES	60	PEPD (ENSTMTG00000022817) #8	CEBPG (ENSTMTG00000022815) #9	CEBPA (ENSTMTG00000022813) #10	SLC7A10 (ENSTMTG00000022811) #11	LRP3 (ENSTMTG00000022810) #12	WDR88 (ENSTMTG00000022808) #13	GPATCH1 (ENSTMTG00000022805) #14	RHPN2 (ENSTMTG00000022802) #15	FAAP24 (ENSTMTG00000022798) #16	ENSTMTG00000022797	CEP89 (ENSTMTG00000022794) #17	SLC7A9 (ENSTMTG00000022791) #18	TDRD12 (ENSTMTG00000022781) #19	NUDT19 (ENSTMTG00000022778) #20	RGS9BP (ENSTMTG00000022775) #21	ANKRD27 (ENSTMTG00000022771) #22	ENSTMTG00000022770	ENSTMTG00000022765	DPY19L3 (ENSTMTG00000022759) #24	ZNF507 (ENSTMTG00000022756) #25	TSHZ3 (ENSTMTG00000022753) #26	ZNF536 (ENSTMTG00000022747) #27	URI1 (ENSTMTG00000022743) #28	CCNE1 (ENSTMTG00000022737) #29	ENSTMTG00000022732	PLEKHF1 (ENSTMTG00000022727) #31	POP4 (ENSTMTG00000022723) #32	VSTM2B (ENSTMTG00000022720) #33	UQCRFS1 (ENSTMTG00000022718) #34	SHCBP1 (ENSTMTG00000022715)	ENSTMTG00000022710
painted turtle	MODERN SPECIES	4	CEBPG (ENSCPBG00000001227) #9	CEBPA (ENSCPBG00000001223) #10	ENSCPBG00000001219	SLC7A10 (ENSCPBG00000001106) #11	LRP3 (ENSCPBG00000001086) #12	WDR88 (ENSCPBG00000001046) #13	GPATCH1 (ENSCPBG00000000666) #14	RHPN2 (ENSCPBG00000000592) #15	FAAP24 (ENSCPBG00000000575) #16	ENSCPBG00000000531	CEP89 (ENSCPBG00000000457) #17	SLC7A9 (ENSCPBG00000000262) #18	TDRD12 (ENSCPBG00000000147) #19	NUDT19 (ENSCPBG00000000119) #20	RGS9BP (ENSCPBG00000016211) #21	ANKRD27 (ENSCPBG00000016194) #22	PDCD5 (ENSCPBG00000016192) #23	ENSCPBG00000016189	DPY19L3 (ENSCPBG00000016180) #24	ZNF507 (ENSCPBG00000016177) #25	TSHZ3 (ENSCPBG00000016175) #26	ZNF536 (ENSCPBG00000016167) #27	URI1 (ENSCPBG00000016148) #28	CCNE1 (ENSCPBG00000016144) #29	ENSCPBG00000016139	C19orf12 (ENSCPBG00000016137) #30	PLEKHF1 (ENSCPBG00000016135) #31	POP4 (ENSCPBG00000016132) #32	VSTM2B (ENSCPBG00000016128) #33	ENSCPBG00000016125	UQCRFS1 (ENSCPBG00000016122) #34
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT01000000221079	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021.a #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Goode s thornscrub tortoise	MODERN SPECIES	3	CEBPG (ENSGEVG00005010316) #9	CEBPA (ENSGEVG00005010303) #10	ENSGEVG00005010278	SLC7A10 (ENSGEVG00005009940) #11	LRP3 (ENSGEVG00005009838) #12	WDR88 (ENSGEVG00005009737) #13	GPATCH1 (ENSGEVG00005009654) #14	RHPN2 (ENSGEVG00005009604) #15	FAAP24 (ENSGEVG00005009583) #16	ENSGEVG00005009542	CEP89 (ENSGEVG00005009487) #17	SLC7A9 (ENSGEVG00005017897) #18	TDRD12 (ENSGEVG00005017875) #19	NUDT19 (ENSGEVG00005017853) #20	RGS9BP (ENSGEVG00005017844) #21	ANKRD27 (ENSGEVG00005017798) #22	PDCD5 (ENSGEVG00005017773) #23	ENSGEVG00005017634	DPY19L3 (ENSGEVG00005017231) #24	ZNF507 (ENSGEVG00005017111) #25	TSHZ3 (ENSGEVG00005017085) #26	ZNF536 (ENSGEVG00005017060) #27	URI1 (ENSGEVG00005017029) #28	CCNE1 (ENSGEVG00005016999) #29	ENSGEVG00005016978	C19orf12 (ENSGEVG00005016962) #30	PLEKHF1 (ENSGEVG00005016945) #31	POP4 (ENSGEVG00005016919) #32	VSTM2B (ENSGEVG00005016775) #33	UQCRFS1 (ENSGEVG00005016745) #34	SHCBP1 (ENSGEVG00005016588)
Abingdon island giant tortoise	MODERN SPECIES	92																ENSCABG00000023001 #22	PDCD5 (ENSCABG00000023002) #23	ENSCABG00000023003	DPY19L3 (ENSCABG00000023004) #24	ZNF507 (ENSCABG00000023005) #25	ENSCABG00000023006	SLC25A6 (ENSCABG00000023007)	ASMTL (ENSCABG00000023008)	P2RY8 (ENSCABG00000023009)	ENSCABG00000023010
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000157021.b #22
Testudinidae	ANCESTRAL SPECIES																	ENSGT00940000157021.b #22
Abingdon island giant tortoise	MODERN SPECIES	301	CEBPA (ENSCABG00000013613) #10	ENSCABG00000013615	SLC7A10 (ENSCABG00000013618) #11	LRP3 (ENSCABG00000013637) #12	WDR88 (ENSCABG00000014136) #13	GPATCH1 (ENSCABG00000014162) #14	RHPN2 (ENSCABG00000014457) #15	FAAP24 (ENSCABG00000014589) #16	ENSCABG00000014590	CEP89 (ENSCABG00000014593) #17	ENSCABG00000014611	SLC7A9 (ENSCABG00000014614) #18	TDRD12 (ENSCABG00000014616) #19	NUDT19 (ENSCABG00000014626) #20	RGS9BP (ENSCABG00000014627) #21	ENSCABG00000014628 #22
Chinese turtle	MODERN SPECIES	940											ENSPSIG00000013465	TDRD12 (ENSPSIG00000012970) #19	ENSPSIG00000001895	NUDT19 (ENSPSIG00000012955) #20	RGS9BP (ENSPSIG00000001892) #21	ANKRD27 (ENSPSIG00000012421) #22	PDCD5 (ENSPSIG00000012235) #23	ENSPSIG00000008489	DPY19L3 (ENSPSIG00000007940) #24	ZNF507 (ENSPSIG00000007531) #25	ENSPSIG00000001889	ENSPSIG00000001887	TSHZ3 (ENSPSIG00000007188) #26	ZNF536 (ENSPSIG00000007065) #27	URI1 (ENSPSIG00000016948) #28	CCNE1 (ENSPSIG00000016456) #29	ENSPSIG00000016381	C19orf12 (ENSPSIG00000016276) #30	PLEKHF1 (ENSPSIG00000016268) #31	POP4 (ENSPSIG00000015690) #32	ENSPSIG00000015651 #33
Lepidosauria	ANCESTRAL SPECIES	49					ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077.jb #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077.jb.a #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077.jb.a #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a
Elapidae	ANCESTRAL SPECIES	17	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847.b #19	ENSGT00420000029847.a #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077.jb.a #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847.a #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077.jb.a #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847.a #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000009077.jb.a #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310	ENSGT00940000163206.a	ENSGT00390000007315
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	120	ENSPTXG00000008208	ENSPTXG00000008209	ENSPTXG00000008210	ENSPTXG00000008212	ENSPTXG00000008214 #11	ENSPTXG00000008216 #12	ENSPTXG00000008220 #14	ENSPTXG00000008223 #15	ENSPTXG00000008224 #16	ENSPTXG00000008225 #17	ENSPTXG00000008226	ENSPTXG00000008227 #18	ENSPTXG00000008230 #19	ENSPTXG00000008238 #20	ENSPTXG00000008239 #21	ENSPTXG00000008241 #22	ENSPTXG00000008242 #23	ENSPTXG00000008243 #24	ENSPTXG00000008279 #25	ENSPTXG00000008280 #26
Eastern brown snake	MODERN SPECIES	119	ENSPTXG00000018213	ENSPTXG00000018214	ENSPTXG00000018215	ENSPTXG00000018216 #11	ENSPTXG00000018218 #12	ENSPTXG00000018220 #14	ENSPTXG00000018221 #15	ENSPTXG00000018225 #16	ENSPTXG00000018226	ENSPTXG00000018227 #17	ENSPTXG00000018228	ENSPTXG00000018229 #18	ENSPTXG00000018230 #19	ENSPTXG00000018231 #20	ENSPTXG00000018232 #21	ENSPTXG00000018233 #22	ENSPTXG00000007825 #23	ENSPTXG00000007826 #24	ENSPTXG00000007827 #25	ENSPTXG00000007828 #26
Mainland tiger snake	MODERN SPECIES	79	ENSNSUG00000012986	ENSNSUG00000012984	ENSNSUG00000012982	AARS1 (ENSNSUG00000012896)	EXOSC6 (ENSNSUG00000012895)	SLC7A10 (ENSNSUG00000012892) #11	LRP3 (ENSNSUG00000012762) #12	GPATCH1 (ENSNSUG00000012761) #14	RHPN2 (ENSNSUG00000012760) #15	FAAP24 (ENSNSUG00000012759) #16	ENSNSUG00000012758	SLC7A9 (ENSNSUG00000012757) #18	TDRD12 (ENSNSUG00000012756) #19	NUDT19 (ENSNSUG00000012755) #20	RGS9BP (ENSNSUG00000012754) #21	ANKRD27 (ENSNSUG00000012753) #22	PDCD5 (ENSNSUG00000012752) #23	DPY19L3 (ENSNSUG00000012720) #24	ZNF507 (ENSNSUG00000012719) #25	TSHZ3 (ENSNSUG00000012718) #26	ZNF536 (ENSNSUG00000012717) #27	URI1 (ENSNSUG00000012716) #28	CCNE1 (ENSNSUG00000012715) #29	ENSNSUG00000012714 #30	PLEKHF1 (ENSNSUG00000012713) #31	POP4 (ENSNSUG00000012712) #32	VSTM2B (ENSNSUG00000012711) #33	UQCRFS1 (ENSNSUG00000012710) #34	SHCBP1 (ENSNSUG00000012709)	ENSNSUG00000012694	VPS35 (ENSNSUG00000012693)
Blue-lipped sea krait	MODERN SPECIES	7255													TDRD12 (ENSLLTG00000008121) #19	NUDT19 (ENSLLTG00000008169) #20	RGS9BP (ENSLLTG00000008185) #21	ANKRD27 (ENSLLTG00000008227) #22	PDCD5 (ENSLLTG00000008377) #23	DPY19L3 (ENSLLTG00000008398) #24	ZNF507 (ENSLLTG00000008473) #25
Indian cobra	MODERN SPECIES	12	ENSNNAG00000015622	AARS1 (ENSNNAG00000015672)	EXOSC6 (ENSNNAG00000016166)	ENSNNAG00000016173	SLC7A10 (ENSNNAG00000016186) #11	LRP3 (ENSNNAG00000016228) #12	GPATCH1 (ENSNNAG00000016248) #14	FAAP24 (ENSNNAG00000016259) #16	RHPN2 (ENSNNAG00000016305) #15	CEP89 (ENSNNAG00000016646) #17	ENSNNAG00000016664	SLC7A9 (ENSNNAG00000016683) #18	TDRD12 (ENSNNAG00000016697) #19	NUDT19 (ENSNNAG00000016812) #20	RGS9BP (ENSNNAG00000016817) #21	ANKRD27 (ENSNNAG00000016829) #22	PDCD5 (ENSNNAG00000010137) #23	DPY19L3 (ENSNNAG00000010209) #24	ZNF507 (ENSNNAG00000011046) #25	TSHZ3 (ENSNNAG00000011079) #26	ZNF536 (ENSNNAG00000011087) #27	URI1 (ENSNNAG00000011117) #28	CCNE1 (ENSNNAG00000011156) #29	ENSNNAG00000011184	C19orf12 (ENSNNAG00000011209) #30	PLEKHF1 (ENSNNAG00000011243) #31	POP4 (ENSNNAG00000011255) #32	VSTM2B (ENSNNAG00000011284) #33	UQCRFS1 (ENSNNAG00000011334) #34	SHCBP1 (ENSNNAG00000011347)	ENSNNAG00000011400
Lizard	MODERN SPECIES	1095								RHPN2 (ENSACAG00000007189) #15	FAAP24 (ENSACAG00000007273) #16	CEP89 (ENSACAG00000007295) #17	ENSACAG00000039937	SLC7A9 (ENSACAG00000007311) #18	TDRD12 (ENSACAG00000029615) #19	NUDT19 (ENSACAG00000007438) #20	RGS9BP (ENSACAG00000007456) #21	ANKRD27 (ENSACAG00000007458) #22	ENSACAG00000007506	ENSACAG00000026001	TMEM231 (ENSACAG00000007509)	ENSACAG00000007547	ADAT1 (ENSACAG00000007555)	ENSACAG00000007709	TAT (ENSACAG00000007712)	AP1G1 (ENSACAG00000007802)	ATXN1L (ENSACAG00000023660)	ZNF821 (ENSACAG00000007999)	IST1 (ENSACAG00000008004)	PKD1L3 (ENSACAG00000008055)	ENSACAG00000008085	DHX38 (ENSACAG00000008115)	ENSACAG00000022617
Laterata	ANCESTRAL SPECIES	28			ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077.jb.a #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00940000161356 #33	ENSGT00390000001014 #34	ENSGT00940000161310
Common wall lizard	MODERN SPECIES	16	STARD8 (ENSPMRG00000020412)	AARS1 (ENSPMRG00000020393)	EXOSC6 (ENSPMRG00000020389)	SLC7A10 (ENSPMRG00000020313) #11	LRP3 (ENSPMRG00000020284) #12	GPATCH1 (ENSPMRG00000020269) #14	RHPN2 (ENSPMRG00000020259) #15	FAAP24 (ENSPMRG00000020254) #16	ENSPMRG00000020249	CEP89 (ENSPMRG00000020236) #17	ENSPMRG00000020207 #18	ENSPMRG00000020010 #18	TDRD12 (ENSPMRG00000019898) #19	NUDT19 (ENSPMRG00000019876) #20	RGS9BP (ENSPMRG00000019872) #21	ANKRD27 (ENSPMRG00000019851) #22	PDCD5 (ENSPMRG00000019845) #23	ENSPMRG00000019807	DPY19L3 (ENSPMRG00000019792) #24	ZNF507 (ENSPMRG00000019776) #25	ENSPMRG00000019771	TSHZ3 (ENSPMRG00000019765) #26	ZNF536 (ENSPMRG00000019756) #27	URI1 (ENSPMRG00000019743) #28	CCNE1 (ENSPMRG00000019724) #29	ENSPMRG00000019707	ENSPMRG00000019704 #30	ENSPMRG00000019700 #30	ENSPMRG00000019691 #30	PLEKHF1 (ENSPMRG00000019684) #31	POP4 (ENSPMRG00000019675) #32
Argentine black and white tegu	MODERN SPECIES	86		LRP3 (ENSSMRG00000017100) #12	SLC7A10 (ENSSMRG00000017101) #11	EXOSC6 (ENSSMRG00000017105)	AARS1 (ENSSMRG00000017106)	ENSSMRG00000017112	ENSSMRG00000017115	ENSSMRG00000017118	FAAP24 (ENSSMRG00000017123) #16	CEP89 (ENSSMRG00000017126) #17	ENSSMRG00000017132	SLC7A9 (ENSSMRG00000017135) #18	TDRD12 (ENSSMRG00000017139) #19	NUDT19 (ENSSMRG00000017151) #20	RGS9BP (ENSSMRG00000017152) #21	ANKRD27 (ENSSMRG00000017154) #22	PDCD5 (ENSSMRG00000017156) #23	ENSSMRG00000017159	DPY19L3 (ENSSMRG00000017164) #24	ZNF507 (ENSSMRG00000017166) #25	TSHZ3 (ENSSMRG00000017169) #26	ZNF536 (ENSSMRG00000017174) #27	URI1 (ENSSMRG00000017182) #28	CCNE1 (ENSSMRG00000017186) #29	ENSSMRG00000017191	C19orf12 (ENSSMRG00000017192) #30	PLEKHF1 (ENSSMRG00000017205) #31	POP4 (ENSSMRG00000017206) #32	VSTM2B (ENSSMRG00000017209) #33	UQCRFS1 (ENSSMRG00000017211) #34	SHCBP1 (ENSSMRG00000017212)
tuatara	MODERN SPECIES	518			SLC7A10 (ENSSPUG00000013471) #11	LRP3 (ENSSPUG00000013385) #12	ENSSPUG00000013361 #14	ENSSPUG00000013348 #14	RHPN2 (ENSSPUG00000013312) #15	FAAP24 (ENSSPUG00000013302) #16	ENSSPUG00000013288	ENSSPUG00000013270	ENSSPUG00000013257	SLC7A9 (ENSSPUG00000013215) #18	TDRD12 (ENSSPUG00000013174) #19	NUDT19 (ENSSPUG00000013160) #20	RGS9BP (ENSSPUG00000013153) #21	ANKRD27 (ENSSPUG00000013123) #22	PDCD5 (ENSSPUG00000013107) #23	DPY19L3 (ENSSPUG00000013037) #24	ZNF507 (ENSSPUG00000013009) #25
Anura	ANCESTRAL SPECIES	10	ENSGT00940000159100 #7	ENSGT00940000153657.B #8	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00940000156370 #18	ENSGT00940000166448	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000164020	ENSGT00530000063023.A.a #24	ENSGT00490000043434 #25	ENSGT00950000183051.b.a #26	ENSGT00940000156397.a.a #27	ENSGT00390000002362 #28	ENSGT00940000156256 #29	ENSGT00390000006020	ENSGT00390000009077 #30	ENSGT00940000160728 #31	ENSGT00390000010067 #32	ENSGT00390000001014 #34	ENSGT00940000161356 #33	ENSGT00940000158892.a.a
Frog	MODERN SPECIES	4	ENSXETG00000042173	pepd (ENSXETG00000018297) #8	cebpa (ENSXETG00000042713) #10	slc7a10 (ENSXETG00000018279) #11	lrp3 (ENSXETG00000033897) #12	wdr88 (ENSXETG00000036859) #13	gpatch1 (ENSXETG00000018276) #14	rhpn2 (ENSXETG00000018271) #15	faap24 (ENSXETG00000027542) #16	cep89 (ENSXETG00000018269) #17	ENSXETG00000041178	slc7a9 (ENSXETG00000018268) #18	tdrd12 (ENSXETG00000031945)	nudt19 (ENSXETG00000025567) #20	rgs9bp (ENSXETG00000013561) #21	ankrd27 (ENSXETG00000034953) #22	ENSXETG00000047664	pdcd5 (ENSXETG00000013573) #23	ENSXETG00000013574	dpy19l3 (ENSXETG00000031719) #24	znf507 (ENSXETG00000013603) #25	tshz3 (ENSXETG00000016288) #26	ENSXETG00000039283	znf536 (ENSXETG00000033671) #27	uri1 (ENSXETG00000012924) #28	plekhf1 (ENSXETG00000010768) #31	ccne1 (ENSXETG00000012929) #29	XB5931222 [provisional] (ENSXETG00000025560)	c19orf12 (ENSXETG00000046864) #30	pop4 (ENSXETG00000017598) #32	ENSXETG00000043047
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000010068 #8	CEBPA (ENSLLEG00000010043) #10	SLC7A10 (ENSLLEG00000009954) #11	LRP3 (ENSLLEG00000009881) #12	WDR88 (ENSLLEG00000009753) #13	GPATCH1 (ENSLLEG00000009428) #14	RHPN2 (ENSLLEG00000009267) #15	FAAP24 (ENSLLEG00000009186) #16	ENSLLEG00000009141	ENSLLEG00000009100	CEP89 (ENSLLEG00000008749) #17	SLC7A9 (ENSLLEG00000008648) #18	ENSLLEG00000008530	NUDT19 (ENSLLEG00000008431) #20	RGS9BP (ENSLLEG00000019401) #21	ANKRD27 (ENSLLEG00000018378) #22	PDCD5 (ENSLLEG00000018189) #23	ENSLLEG00000017733	ENSLLEG00000017692	DPY19L3 (ENSLLEG00000017486) #24	ZNF507 (ENSLLEG00000017432) #25	ENSLLEG00000017405	TSHZ3 (ENSLLEG00000017323) #26	ENSLLEG00000017296	ZNF536 (ENSLLEG00000017215) #27	ENSLLEG00000017177	ENSLLEG00000017164	URI1 (ENSLLEG00000016966) #28	ENSLLEG00000016895	CCNE1 (ENSLLEG00000016789) #29	ENSLLEG00000016721
Coelacanth	MODERN SPECIES	1360												ENSLACG00000012311 #18	ENSLACG00000011856 #18	TDRD12 (ENSLACG00000010650) #19	RGS9BP (ENSLACG00000010405) #21	ANKRD27 (ENSLACG00000009495) #22	ENSLACG00000008942	ENSLACG00000007298	ITFG1 (ENSLACG00000001173)
Actinopterygii	ANCESTRAL SPECIES	49													ENSGT00420000029847 #19	ENSGT00420000029858 #20	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000156370 #18	ENSGT00390000018876 #17	ENSGT00730000111020.a	ENSGT00390000009456 #16	ENSGT00940000153837.a.b #15	ENSGT00390000007074 #14	ENSGT00940000162291 #13	ENSGT00940000160021 #12	ENSGT00940000156469 #11	ENSGT00940000162646 #10	ENSGT00940000160676 #9	ENSGT00940000166016	ENSGT00940000153657.B #8	ENSGT00940000159496
Neopterygii	ANCESTRAL SPECIES	25	ENSGT00940000166016	ENSGT00940000160676 #9	ENSGT00940000162646 #10	ENSGT00940000156469 #11	ENSGT00940000160021 #12	ENSGT00940000162291 #13	ENSGT00390000007074 #14	ENSGT00940000153837.a.b #15	ENSGT00390000009456 #16	ENSGT00730000111020.a	ENSGT00390000018876 #17	ENSGT00940000156370 #18	ENSGT00420000029858 #20	ENSGT00420000029847 #19	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22	ENSGT00390000011085 #23	ENSGT00940000153229.A.a.a.a	ENSGT00940000168437	ENSGT00900000141128	ENSGT00940000165218	ENSGT00940000159082	ENSGT00390000011262	ENSGT00390000008931	ENSGT00390000016453	ENSGT00990000204976	ENSGT00940000157600	ENSGT00390000015857	ENSGT00390000015893	ENSGT00950000182971.A	ENSGT00390000010961
Osteoglossocephalai	ANCESTRAL SPECIES	582														ENSGT00420000029847 #19	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	40	ENSGT00940000158845	ENSGT00940000159190	ENSGT00940000160212.a	ENSGT00940000159578	ENSGT00940000166016	ENSGT00940000162646.h #10	ENSGT00390000007074 #14	ENSGT00940000160021 #12	ENSGT00940000156469.b #11	ENSGT00940000153837.a.b.m #15	ENSGT00390000009456 #16	ENSGT00940000166619	ENSGT00730000111020.a	ENSGT00940000156370.hb #18	ENSGT00420000029858 #20	ENSGT00940000157021.m #22	ENSGT00940000156519.q	ENSGT00950000182971.A	ENSGT00390000015893	ENSGT00390000015857	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262	ENSGT00940000159082	ENSGT00940000165218.a	ENSGT00900000141128	ENSGT00940000168437	ENSGT00940000153229.A.a.a.a	ENSGT00390000011085 #23	ENSGT00390000015359	ENSGT00390000002290
P. kingsleyae	MODERN SPECIES	42	slc9a5 (ENSPKIG00000020982)	FHOD1 (ENSPKIG00000020883)	ABCC12 (ENSPKIG00000020818)	ENSPKIG00000020798	cebpg (ENSPKIG00000020792)	cebpa (ENSPKIG00000020777) #10	gpatch1 (ENSPKIG00000020745) #14	lrp3 (ENSPKIG00000020719) #12	slc7a10a (ENSPKIG00000020685) #11	rhpn2 (ENSPKIG00000020647) #15	faap24 (ENSPKIG00000020612) #16	cep89 (ENSPKIG00000020582)	zgc:165481 (ENSPKIG00000020571)	SLC7A9 (ENSPKIG00000020536) #18	nudt19 (ENSPKIG00000020518) #20	ANKRD27 (ENSPKIG00000020433) #22	zdhhc7 (ENSPKIG00000020376)	nip7 (ENSPKIG00000020345)	cog8 (ENSPKIG00000020319)	NOB1 (ENSPKIG00000020293)	MLKL (ENSPKIG00000020269)	RFWD3 (ENSPKIG00000020249)	GLG1 (ENSPKIG00000020211)	PDPR (ENSPKIG00000020136)	ENSPKIG00000020110	CLEC18A (ENSPKIG00000020083)	ENSPKIG00000020069	ENSPKIG00000020053	urahb (ENSPKIG00000020038)	pdcd5 (ENSPKIG00000020016) #23	mvda (ENSPKIG00000019988)
Asian bonytongue	MODERN SPECIES	2	slc9a5 (ENSSFOG00015011626)	FHOD1 (ENSSFOG00015011605)	ABCC12 (ENSSFOG00015011583)	cebpg (ENSSFOG00015011571)	cebpa (ENSSFOG00015011558) #10	ENSSFOG00015024234	gpatch1 (ENSSFOG00015011535) #14	lrp3 (ENSSFOG00015011517) #12	slc7a10a (ENSSFOG00015011468) #11	rhpn2 (ENSSFOG00015011447) #15	faap24 (ENSSFOG00015011441) #16	cep89 (ENSSFOG00015011398)	ENSSFOG00015030605	SLC7A9 (ENSSFOG00015011357) #18	nudt19 (ENSSFOG00015030506) #20	ANKRD27 (ENSSFOG00015011291) #22	rapsn (ENSSFOG00015011243)	vamp1a (ENSSFOG00015011234)	ENSSFOG00015011204	ddb1 (ENSSFOG00015011151)	chid1 (ENSSFOG00015011120)	tspan4a (ENSSFOG00015027639)	ENSSFOG00015011059	taldo1 (ENSSFOG00015011023)	SLFN5 (ENSSFOG00015011013)	cd151l (ENSSFOG00015010999)	cracr2b (ENSSFOG00015010982)	tmem138 (ENSSFOG00015010971)	saa (ENSSFOG00015010954)	hps5 (ENSSFOG00015010902)	gtf2h1 (ENSSFOG00015010869)
Osteoglossiformes	ANCESTRAL SPECIES	244						ENSGT00940000160212.b	ENSGT00940000153875.d.b.a	ENSGT00940000159191.l	ENSGT00940000159716.f	ENSGT00940000178557	ENSGT00940000153216.a.a.c.b	ENSGT00940000153216.a.a.c.a	ENSGT00940000156469.a #11	ENSGT00420000029847 #19	ENSGT00940000153725.a.b.a #21	ENSGT00940000157021.n #22	ENSGT00940000156519.r	ENSGT00940000178271	ENSGT00940000158316	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00940000157600	ENSGT01030000234510.b.d	ENSGT00940000159115.a.a	ENSGT00940000160625.r.b	ENSGT00390000018903.h	ENSGT00940000161035.b	ENSGT00940000158140.eb	ENSGT00940000164598
Asian bonytongue	MODERN SPECIES	22	tppp3 (ENSSFOG00015031817)	zdhhc1 (ENSSFOG00015000574)	hsd11b2 (ENSSFOG00015000546)	agrp (ENSSFOG00015026149)	ctrb.2 (ENSSFOG00015000490)	ctrb.3 (ENSSFOG00015000462)	ENSSFOG00015032244	ctrb.3 (ENSSFOG00015000424)	cebpg (ENSSFOG00015000406)	CEBPA (ENSSFOG00015030716) #10	SLC7A10 (ENSSFOG00015000337) #11	rhpn2 (ENSSFOG00015000325) #15	zgc:165481 (ENSSFOG00015000302)	ENSSFOG00015000297 #19	RGS9BP (ENSSFOG00015026503) #21	ANKRD27 (ENSSFOG00015000167) #22	zdhhc7 (ENSSFOG00015000116)	ENSSFOG00015025056	TMED6 (ENSSFOG00015000070)	ENSSFOG00015000068	WDR59 (ENSSFOG00015020229)	ENSSFOG00015024905	ENSSFOG00015030264	mc1r (ENSSFOG00015020179)	ENSSFOG00015014131	ENSSFOG00015020116	DBNDD1 (ENSSFOG00015020101)	foxf1 (ENSSFOG00015020091)	irf8 (ENSSFOG00015020084)	dusp22a (ENSSFOG00015020073)	gse1b (ENSSFOG00015019928)
Clupeocephala	ANCESTRAL SPECIES	324										ENSGT00940000156482.c	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000160625.r.a
Otomorpha	ANCESTRAL SPECIES	442										ENSGT00940000156482.c	ENSGT00940000156131.a.a	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00740000115898	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453
Clupeiformes	ANCESTRAL SPECIES	458												ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00740000115898	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453
Denticle herring	MODERN SPECIES	8	tph2 (ENSDCDG00000022814)	ENSDCDG00000022801	ENSDCDG00000022800	akip1 (ENSDCDG00000033984)	ENSDCDG00000033981	sinhcafl (ENSDCDG00000033978)	znf143b (ENSDCDG00000033971)	wee1 (ENSDCDG00000033912)	swap70b (ENSDCDG00000033899)	ENSDCDG00000033896	rnf141 (ENSDCDG00000033892)	TMED6 (ENSDCDG00000033891)	ZDHHC7 (ENSDCDG00000033889)	bmb (ENSDCDG00000033885)	ENSDCDG00000033879 #19	ANKRD27 (ENSDCDG00000033871) #22	TMED6 (ENSDCDG00000033868)	ENSDCDG00000033866	ENSDCDG00000033862	bmb (ENSDCDG00000033859)	faap24 (ENSDCDG00000033857) #16	SLC7A10 (ENSDCDG00000033837) #11	ENSDCDG00000033831	ENSDCDG00000033828	impdh1a (ENSDCDG00000033674)	ENSDCDG00000033668	si:dkey-5i3.5 (ENSDCDG00000033666)	rbm28 (ENSDCDG00000033664)	ENSDCDG00000033661	lrrc4.2 (ENSDCDG00000033658)	HGF (ENSDCDG00000033652)
Atlantic herring	MODERN SPECIES	19	lrrc4ca (ENSCHAG00000014088)	ENSCHAG00000014071	rag2 (ENSCHAG00000014056)	rag1 (ENSCHAG00000014008)	ENSCHAG00000013729	furinb (ENSCHAG00000011758)	MAN2A2 (ENSCHAG00000010404)	unc45a (ENSCHAG00000008633)	ENSCHAG00000008566	cib1 (ENSCHAG00000008498)	NUDT7 (ENSCHAG00000008488)	SLC7A10 (ENSCHAG00000007845) #11	faap24 (ENSCHAG00000007815) #16	bmb (ENSCHAG00000007719)	ENSCHAG00000007671 #19	ANKRD27 (ENSCHAG00000007424) #22	ZDHHC7 (ENSCHAG00000007380)	ENSCHAG00000007353	ENSCHAG00000007327	AMPD3 (ENSCHAG00000006492)	swap70b (ENSCHAG00000006300)	ENSCHAG00000006263	ENSCHAG00000006258	tph2 (ENSCHAG00000006084)	tbc1d15 (ENSCHAG00000002137)	vps9d1 (ENSCHAG00000001186)	ENSCHAG00000000677	ENSCHAG00000000628	pdf (ENSCHAG00000023378)	ENSCHAG00000023373	tat (ENSCHAG00000022985)
Otophysi	ANCESTRAL SPECIES	13	ENSGT00940000154415.lb.b	ENSGT00390000000707.y.a	ENSGT00940000160204	ENSGT00390000009212	ENSGT00530000063759.a	ENSGT00940000155938.b.b	ENSGT00950000183202.a.b	ENSGT00520000055620.B	ENSGT00550000075019	ENSGT00940000159483.a.a	ENSGT00940000156482.c	ENSGT00940000156131.a.a	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00740000115898	ENSGT00940000157021 #22	ENSGT00940000161531.a.b	ENSGT00940000157389	ENSGT00940000166064	ENSGT00940000155213.y	ENSGT00390000018903.n	ENSGT00940000160625.r.a	ENSGT00420000029847 #19	ENSGT01100000264203	ENSGT00940000165218.b	ENSGT00390000011262.e.a	ENSGT00390000008931
Characiphysae	ANCESTRAL SPECIES	6	ENSGT00940000165047	ENSGT00390000012069	ENSGT00390000013777	ENSGT00940000153883.a	ENSGT00940000153998.b	ENSGT00530000064873.b.e	ENSGT00730000111073	ENSGT00940000163982	ENSGT00390000010251	ENSGT00390000018051	ENSGT00940000156717.e	ENSGT00730000111271	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00740000115898	ENSGT00940000157021 #22	ENSGT00940000161531.a.a	ENSGT00940000157389	ENSGT00940000166064	ENSGT00940000155213.y	ENSGT00390000018903.n	ENSGT00940000160625.r.a	ENSGT00420000029847 #19	ENSGT01100000264203	ENSGT00940000165218.b	ENSGT00390000011262.e.a	ENSGT00390000008931	ENSGT00390000005222	ENSGT00390000016821	ENSGT00940000157226	ENSGT00940000154860.a.b
Channel catfish	MODERN SPECIES	5	thoc5 (ENSIPUG00000015790)	zgc:158398 (ENSIPUG00000015866)	Morc2a (ENSIPUG00000015886)	prnprs3 (ENSIPUG00000016085)	ENSIPUG00000016095	ENSIPUG00000016122	ENSIPUG00000016151	ccdc77 (ENSIPUG00000016192)	hdhd5 (ENSIPUG00000016245)	RAB19 (ENSIPUG00000016261)	ccdc34 (ENSIPUG00000016279)	ctrb.1 (ENSIPUG00000016295)	SLC7A10 (ENSIPUG00000016318) #11	faap24 (ENSIPUG00000016336) #16	bmb (ENSIPUG00000016364)	ankrd27 (ENSIPUG00000016419) #22	MAF (ENSIPUG00000016535)	wwox (ENSIPUG00000016550)	HPRT1 (ENSIPUG00000016643)	NFAT5 (ENSIPUG00000016725)	ENSIPUG00000016804	ENSIPUG00000016809	ENSIPUG00000016825 #19	ENSIPUG00000016875	ENSIPUG00000016891	GLG1 (ENSIPUG00000016903)	rfwd3 (ENSIPUG00000016960)	ticrr (ENSIPUG00000016977)	zcrb1 (ENSIPUG00000017007)	c14h11orf96 (ENSIPUG00000017018)	alkbh3 (ENSIPUG00000017036)
Characiphysae_b	ANCESTRAL SPECIES	5	ENSGT00390000012069	ENSGT00390000013777	ENSGT00940000153883.a	ENSGT00940000153998.b	ENSGT00530000064873.b.e	ENSGT00730000111073	ENSGT00940000163982	ENSGT00390000010251	ENSGT00390000018051	ENSGT00940000156717.e	ENSGT00730000111271	ENSGT00940000153216.a.a.c.b.n	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00740000115898	ENSGT00940000157021 #22	ENSGT01050000244951.a.b.a.a.g.b	ENSGT00940000161531.a.a	ENSGT00940000157389	ENSGT00940000166064	ENSGT00940000155213.y	ENSGT00390000018903.n	ENSGT00940000160625.r.a	ENSGT00420000029847 #19	ENSGT00390000011085 #23	ENSGT00940000153229.A.a.a.a	ENSGT00940000165218.b	ENSGT00390000011262.e.a	ENSGT00390000008931	ENSGT00390000005222	ENSGT00390000016821
Characoidei	ANCESTRAL SPECIES	4	ENSGT00390000012069	ENSGT00390000013777	ENSGT00940000153883.a	ENSGT00940000153998.b	ENSGT00530000064873.b.e	ENSGT00730000111073	ENSGT00940000163982	ENSGT00390000010251	ENSGT00390000018051	ENSGT00940000156717.e	ENSGT00730000111271	ENSGT00940000153216.a.a.c.b.n	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00740000115898	ENSGT00940000157021 #22	ENSGT00940000161531.a.a.g	ENSGT00940000157389	ENSGT00940000166064	ENSGT00940000155213.y	ENSGT00390000018903.n	ENSGT00940000160625.r.a	ENSGT00420000029847 #19	ENSGT00390000011085 #23	ENSGT00940000153229.A.a.a.a	ENSGT00940000165218.b	ENSGT00390000011262.e.a	ENSGT00390000008931	ENSGT00390000005222	ENSGT00390000016821	ENSGT00940000157226
Red-bellied piranha	MODERN SPECIES	61	ENSPNAG00000017313	thoc5 (ENSPNAG00000017294)	zgc:158398 (ENSPNAG00000017185)	morc2 (ENSPNAG00000017170)	prnprs3 (ENSPNAG00000017148)	ENSPNAG00000017123	ENSPNAG00000016999	ENSPNAG00000016986	ccdc77 (ENSPNAG00000016888)	ccdc34 (ENSPNAG00000016798)	hdhd5 (ENSPNAG00000016754)	ENSPNAG00000016706	SLC7A10 (ENSPNAG00000016669) #11	faap24 (ENSPNAG00000003424) #16	bmb (ENSPNAG00000016590)	ANKRD27 (ENSPNAG00000016573) #22	MAF (ENSPNAG00000016432)	wwox (ENSPNAG00000016428)	hprt1l (ENSPNAG00000016391)	nfat5a (ENSPNAG00000016335)	ENSPNAG00000006184	ENSPNAG00000016275	ENSPNAG00000003413 #19	urahb (ENSPNAG00000016199)	ENSPNAG00000016183	GLG1 (ENSPNAG00000006242)	RFWD3 (ENSPNAG00000015999)	ENSPNAG00000015987	si:ch1073-281m9.1 (ENSPNAG00000015960)	alkbh3 (ENSPNAG00000015943)	hsd17b12a (ENSPNAG00000015898)
Mexicana tetra	MODERN SPECIES	23	zgc:158398 (ENSAMXG00000014201)	morc2 (ENSAMXG00000014169)	prnprs3 (ENSAMXG00000025658)	ENSAMXG00000014138	ENSAMXG00000036962	ENSAMXG00000014080	ccdc77 (ENSAMXG00000014037)	hdhd5 (ENSAMXG00000014019)	RAB19 (ENSAMXG00000043316)	ccdc34 (ENSAMXG00000013987)	ENSAMXG00000013972	ENSAMXG00000013952	SLC7A10 (ENSAMXG00000013943) #11	faap24 (ENSAMXG00000034386) #16	bmb (ENSAMXG00000013905)	ANKRD27 (ENSAMXG00000013880) #22	MAF (ENSAMXG00000031388)	wwox (ENSAMXG00000013856)	hprt1l (ENSAMXG00000013850)	nfat5a (ENSAMXG00000042441)	ENSAMXG00000030745	ENSAMXG00000013811 #19	urahb (ENSAMXG00000040373)	ENSAMXG00000013771	GLG1 (ENSAMXG00000013753)	RFWD3 (ENSAMXG00000013735)	hsd17b12a (ENSAMXG00000013705)	alkbh3 (ENSAMXG00000037076)	si:ch1073-281m9.1 (ENSAMXG00000037539)	ENSAMXG00000013655	api5 (ENSAMXG00000013641)
Electric eel	MODERN SPECIES	47	cd151 (ENSEEEG00000019420)	gatd1 (ENSEEEG00000019415)	chid1 (ENSEEEG00000019412)	thoc5 (ENSEEEG00000019393)	zgc:158398 (ENSEEEG00000019389)	morc2 (ENSEEEG00000019110)	prnprs3 (ENSEEEG00000019093)	ccdc77 (ENSEEEG00000019089)	hdhd5 (ENSEEEG00000019088)	RAB19 (ENSEEEG00000019086)	ENSEEEG00000019084	ENSEEEG00000018887	SLC7A10 (ENSEEEG00000018837) #11	faap24 (ENSEEEG00000018834) #16	bmb (ENSEEEG00000018833)	ANKRD27 (ENSEEEG00000018831) #22	MAF (ENSEEEG00000018829)	wwox (ENSEEEG00000018828)	hprt1l (ENSEEEG00000018819)	nfat5a (ENSEEEG00000018817)	ENSEEEG00000018815	ENSEEEG00000018795	ENSEEEG00000018791 #19	urahb (ENSEEEG00000018790)	ENSEEEG00000018789	GLG1 (ENSEEEG00000018670)	ENSEEEG00000018662	si:ch1073-281m9.1 (ENSEEEG00000018660)	alkbh3 (ENSEEEG00000018659)	hsd17b12a (ENSEEEG00000018628)
Cyprinoidei	ANCESTRAL SPECIES	88	ENSGT00940000154415.lb.b	ENSGT00390000000707.y.a	ENSGT00940000160204	ENSGT00390000009212	ENSGT00530000063759.a	ENSGT00940000155938.b.b	ENSGT00950000183202.a.b	ENSGT00520000055620.B	ENSGT00940000159483.a.a	ENSGT00940000156482.c	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00740000115898	ENSGT00940000157021 #22	ENSGT00940000161531.a.b.d	ENSGT00940000157389	ENSGT00940000166064	ENSGT00940000155213.y	ENSGT00390000018903.n	ENSGT00940000160625.r.a	ENSGT00420000029847 #19	ENSGT00940000153229.A.a.a.a	ENSGT01060000253591	ENSGT00940000165218.b	ENSGT00390000011262.e.a	ENSGT00390000008931	ENSGT00750000118736	ENSGT00940000159631	ENSGT00390000010961.d
Cyprininae	ANCESTRAL SPECIES	430	ENSGT00390000000707.y.a.e	ENSGT00940000160204	ENSGT00390000009212.b	ENSGT00530000063759.a.g.b	ENSGT00940000155938.b.b.d	ENSGT00950000183202.a.b.i	ENSGT00940000161299.f.h	ENSGT00950000183003.a.b.d	ENSGT00940000159483.a.a	ENSGT00940000156482.c	ENSGT00940000156131.a.a.d	ENSGT00550000075019	ENSGT00940000156469.a.f.a #11	ENSGT00390000009456.q #16	ENSGT00740000115898.f	ENSGT00940000157021 #22	ENSGT00940000161531.a.b.d	ENSGT00940000157389.bb	ENSGT00940000166064.a	ENSGT00940000155213.y.a	ENSGT00390000018903.n.b	ENSGT00940000160625.r.a.c	ENSGT00940000165218.b	ENSGT00390000011262.e.a.j
Goldfish	MODERN SPECIES	17	ENSCARG00000004274	ENSCARG00000004282	ENSCARG00000004286	ENSCARG00000004294	ENSCARG00000004296	ENSCARG00000004299	ENSCARG00000004307	ENSCARG00000004311	zgc:162611 (ENSCARG00000004319)	ENSCARG00000004326	ENSCARG00000004331	ENSCARG00000004338	ENSCARG00000004344	ENSCARG00000004354	ENSCARG00000004364	ANKRD27 (ENSCARG00000004413) #22	ENSCARG00000004539	MAF (ENSCARG00000004548)	wwox (ENSCARG00000004572)	ENSCARG00000004626	hprt1l (ENSCARG00000004643)	nfat5a (ENSCARG00000004707)	ENSCARG00000004756	ENSCARG00000004792	ENSCARG00000005014	GLG1 (ENSCARG00000005053)	NUDT7 (ENSCARG00000005344)	TMED6 (ENSCARG00000005348)	ENSCARG00000005352	ENSCARG00000005355	ENSCARG00000005359
Cyprininae_a	ANCESTRAL SPECIES	827																ENSGT00940000157021 #22	ENSGT00940000161531.a.b.c.a.a.b	ENSGT00940000157389.cb
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	542	KIF21A (ENSSGRG00000035325)	slc2a13b (ENSSGRG00000035245)	lrrk2 (ENSSGRG00000035244)	CLPX (ENSSGRG00000034851)	spi1a (ENSSGRG00000034836)	ENSSGRG00000034835	FIBIN (ENSSGRG00000034833)	ANO3 (ENSSGRG00000034643)	ENSSGRG00000034639	ENSSGRG00000034638	fancf (ENSSGRG00000034637)	slc17a6a (ENSSGRG00000034632)	ANO5 (ENSSGRG00000033938)	ANO9 (ENSSGRG00000033925)	ENSSGRG00000033920	ANKRD27 (ENSSGRG00000033839) #22	MAF (ENSSGRG00000033827)	wwox (ENSSGRG00000033826)	ENSSGRG00000033824
Golden-line barbel	MODERN SPECIES	673																ANKRD27 (ENSSGRG00000002405) #22	MAF (ENSSGRG00000002401)	wwox (ENSSGRG00000002269)	hprt1l (ENSSGRG00000002267)	nfat5a (ENSSGRG00000002224)	ENSSGRG00000002223	ENSSGRG00000002222	ENSSGRG00000002216 #19	ENSSGRG00000002212	GLG1 (ENSSGRG00000001763)
Common carp reference	MODERN SPECIES	37	ENSCCRG00000061204	ENSCCRG00000058264	ENSCCRG00000067526	ENSCCRG00000012743	ENSCCRG00000060232	ENSCCRG00000059679	ENSCCRG00000041145	ENSCCRG00000017405	ENSCCRG00000059243	ENSCCRG00000071273	ENSCCRG00000033138	ENSCCRG00000079081	ENSCCRG00000068098	ENSCCRG00000061770	ENSCCRG00000057144	ENSCCRG00000041985 #22	ENSCCRG00000081341	ENSCCRG00000073838	wwox (ENSCCRG00000070423)	hprt1l (ENSCCRG00000077103)	nfat5a (ENSCCRG00000082071)	ENSCCRG00000060031	ENSCCRG00000058444	ENSCCRG00000045232	ENSCCRG00000004900	ENSCCRG00000036301	ENSCCRG00000056477	ENSCCRG00000057665	ENSCCRG00000060588	ENSCCRG00000059799	ENSCCRG00000036212
Zebrafish	MODERN SPECIES	17	ENSDARG00000109458	ENSDARG00000115054	ENSDARG00000051735	ENSDARG00000111536	zgc:173552 (ENSDARG00000112131)	ENSDARG00000112491	ENSDARG00000114895	hist1h2a3 (ENSDARG00000070280)	zgc:173552 (ENSDARG00000114334)	ENSDARG00000070289	ENSDARG00000115799	zgc:173552 (ENSDARG00000111396)	ENSDARG00000113707	ENSDARG00000051718	ENSDARG00000070297	ANKRD27 (ENSDARG00000089207) #22	irx3b (ENSDARG00000031138)	mafb (ENSDARG00000076520)	ENSDARG00000098485	wwox (ENSDARG00000007614)	hprt1l (ENSDARG00000014866)	nfat5a (ENSDARG00000020872)	ENSDARG00000090108	ENSDARG00000079651	ENSDARG00000075217 #19	urahb (ENSDARG00000089331)	ENSDARG00000097652	si:dkey-234i14.3 (ENSDARG00000091667)	GLG1 (ENSDARG00000061282)	ENSDARG00000087752	ENSDARG00000097790
Euteleosteomorpha	ANCESTRAL SPECIES	21	ENSGT00940000163982	ENSGT00940000155480.c	ENSGT00940000157682.B.b	ENSGT00390000010382	ENSGT00390000005941.d	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b	ENSGT00940000158477.a.b	ENSGT00940000167812	ENSGT00940000177178
Protacanthopterygii	ANCESTRAL SPECIES	29	ENSGT00950000183011.c.a.b.f	ENSGT00940000162514	ENSGT00940000156003.l.a	ENSGT00390000010382	ENSGT00390000005941.d	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000155938.b.b	ENSGT00530000063759.a	ENSGT00940000158301.l	ENSGT00390000009212	ENSGT00940000160204	ENSGT00390000000707.y.a	ENSGT00940000154415.lb.b	ENSGT00390000011620.b.e	ENSGT00940000159496.l	ENSGT00940000159100.h #7	ENSGT00940000154318.A.b	ENSGT00950000182885.A.b	ENSGT00940000156429.t
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	816													ENSGT00940000156131.a.a.e	ENSGT00940000156469.a.a #11	ENSGT00390000009456.p #16	ENSGT00940000157021.q #22	ENSGT00940000159483.a.a.f	ENSGT00520000055620.B.g.a	ENSGT00950000183202.a.b.x.a	ENSGT00940000155938.b.b.a	ENSGT00940000158301.l.a
Huchen	DUPLICATION
Huchen	MODERN SPECIES	873															ENSHHUG00000013837 #22	ENSHHUG00000013818 #22	IRX5 (ENSHHUG00000013815)	ENSHHUG00000013810	rpgrip1l (ENSHHUG00000013343)	RBL2 (ENSHHUG00000013126)	SALL1 (ENSHHUG00000013117)	ENSHHUG00000013114	tent4b (ENSHHUG00000013050)
Huchen	MODERN SPECIES	873																ENSHHUG00000013837 #22	ENSHHUG00000013818 #22	IRX5 (ENSHHUG00000013815)	ENSHHUG00000013810	rpgrip1l (ENSHHUG00000013343)	RBL2 (ENSHHUG00000013126)	SALL1 (ENSHHUG00000013117)	ENSHHUG00000013114	tent4b (ENSHHUG00000013050)
Salmoninae_a	ANCESTRAL SPECIES	83	ENSGT00990000213553	ENSGT00970000197520	ENSGT00390000007681.b.a.a.t.b	ENSGT00940000155663.f.a.c	ENSGT00950000183093.B.b.c	ENSGT00390000003145.t	ENSGT00950000183011.c.a.b.f.c	ENSGT00940000162514	ENSGT00940000156003.l.a.q	ENSGT00390000010382.d	ENSGT00550000075044.c.a	ENSGT00940000160513.b.a	ENSGT00940000156131.a.a.e	ENSGT00940000156469.a.a #11	ENSGT00390000009456.p #16	ENSGT00940000157021.q #22	ENSGT00940000159483.a.a.f	ENSGT00520000055620.B.g.a	ENSGT00950000183202.a.b.x.a	ENSGT00940000155938.b.b.a	ENSGT00940000158301.l.a	ENSGT00940000154415.lb.b.b	ENSGT00390000011620.b.e.e	ENSGT00940000159496.l.i	ENSGT00940000159100.h.i #7	ENSGT00940000156429.t.a	ENSGT00390000001116.h	ENSGT00940000156088.c.b.g	ENSGT00940000157033.h.g	ENSGT00390000000972.e	ENSGT00940000158293.lb
Salmo	ANCESTRAL SPECIES	65	ENSGT00990000213553	ENSGT00970000197520	ENSGT00390000007681.b.a.a.t.b	ENSGT00940000155663.f.a.c	ENSGT00950000183093.B.b.c	ENSGT00390000003145.t	ENSGT00950000183011.c.a.b.f.c	ENSGT00940000162514	ENSGT00940000156003.l.a.q	ENSGT00390000010382.d	ENSGT00940000160513.b.a	ENSGT00550000075044.c.a	ENSGT00940000156482.c.h	ENSGT00940000156131.a.a.e	ENSGT00940000156469.a.a #11	ENSGT00940000157021.q #22	ENSGT00940000159483.a.a.f	ENSGT00520000055620.B.g.a	ENSGT00950000183202.a.b.x.a	ENSGT00940000155938.b.b.a	ENSGT00940000158301.l.a	ENSGT00940000154415.lb.b.b	ENSGT00390000011620.b.e.e	ENSGT00940000159496.l.i	ENSGT00940000159100.h.i #7	ENSGT00940000156429.t.a	ENSGT00390000001116.h	ENSGT00940000156088.c.b.g	ENSGT00940000157033.h.g	ENSGT00390000000972.e	ENSGT00940000158293.lb
River trout	MODERN SPECIES	8	ENSSTUG00000022501	mpped2 (ENSSTUG00000022517)	NAV2 (ENSSTUG00000022582)	dbx1b (ENSSTUG00000023293)	ENSSTUG00000023303	rnf141 (ENSSTUG00000023307)	AMPD3 (ENSSTUG00000023365)	lamb4 (ENSSTUG00000025200)	lamb1a (ENSSTUG00000025697)	bmt2 (ENSSTUG00000033838)	immp2l (ENSSTUG00000033854)	LRRN3 (ENSSTUG00000033874)	amfra (ENSSTUG00000033901)	ENSSTUG00000002665	SLC7A10 (ENSSTUG00000002705) #11	ANKRD27 (ENSSTUG00000002896) #22	IRX5 (ENSSTUG00000003101)	rpgrip1l (ENSSTUG00000003145)	RBL2 (ENSSTUG00000004200)	SALL1 (ENSSTUG00000004804)	tent4b (ENSSTUG00000004864)	GOLPH3 (ENSSTUG00000004973)	lsm14aa (ENSSTUG00000005011)	ENSSTUG00000005087	kctd15a (ENSSTUG00000005136)	CHST8 (ENSSTUG00000005152) #7	tbc1d15 (ENSSTUG00000005227)	ZFC3H1 (ENSSTUG00000007266)	PTPRB (ENSSTUG00000007393)	frs2b (ENSSTUG00000008038)	nup160 (ENSSTUG00000008048)
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000075353	ENSSSAG00000092085	ENSSSAG00000120486	ampd3 (ENSSSAG00000074381)	ENSSSAG00000113909	ENSSSAG00000118686	ENSSSAG00000096633	ENSSSAG00000106537	ENSSSAG00000048641	ENSSSAG00000102267	ENSSSAG00000106237	ENSSSAG00000120751	ENSSSAG00000068162	ENSSSAG00000068156	ENSSSAG00000100300 #11	ENSSSAG00000066231 #22	ENSSSAG00000066328	ENSSSAG00000109682	ENSSSAG00000083462	ENSSSAG00000064592	ENSSSAG00000062821	ENSSSAG00000116904	ENSSSAG00000062773	ENSSSAG00000061656	LSM14A (ENSSSAG00000082344)	ENSSSAG00000061512	ENSSSAG00000106661	CHST8 (ENSSSAG00000061387) #7	ENSSSAG00000055845	ENSSSAG00000055782	ENSSSAG00000052924
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00990000213553	ENSGT01000000220439	ENSGT00390000007681.b.a.a.t.b	ENSGT00940000155663.f.a.c	ENSGT00950000183093.B.b.c	ENSGT00390000003145.t	ENSGT00950000183011.c.a.b.f.c	ENSGT00940000162514	ENSGT00940000156003.l.a.q	ENSGT00390000010382.d	ENSGT00550000075044.d	ENSGT00940000160513.b.a	ENSGT00940000156131.a.a.e	ENSGT00940000156469.a.a #11	ENSGT00390000009456.p #16	ENSGT00940000157021.q #22	ENSGT00940000159483.a.a.f	ENSGT00520000055620.B.g.a	ENSGT00950000183202.a.b.x.a	ENSGT00940000155938.b.b.a	ENSGT00940000158301.l.a	ENSGT00940000154415.lb.b.b	ENSGT00390000011620.b.e.e	ENSGT00940000159496.l.i	ENSGT00940000159100.h.i #7	ENSGT00940000156429.t.a	ENSGT00390000001116.h	ENSGT00940000156088.c.b.g	ENSGT00940000157033.h.g	ENSGT00390000000972.e	ENSGT00940000158293.lb
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00390000005430.v	ENSGT01000000220439	ENSGT00390000007681.b.a.a.t.b	ENSGT00940000155663.f.a.c	ENSGT00950000183093.B.b.c	ENSGT00390000003145.t	ENSGT00950000183011.c.a.b.f.c	ENSGT00940000162514	ENSGT00940000156003.l.a.q	ENSGT00390000010382.d	ENSGT00550000075044.d	ENSGT00940000160513.b.a	ENSGT00940000156131.a.a.e	ENSGT00940000156469.a.a #11	ENSGT00390000009456.p #16	ENSGT00940000157021.q #22	ENSGT00940000159483.a.a.f	ENSGT00520000055620.B.g.a	ENSGT00950000183202.a.b.x.a	ENSGT00940000155938.b.b.a	ENSGT00940000158301.l.a	ENSGT00940000154415.lb.b.b	ENSGT00390000011620.b.e.e	ENSGT00940000159496.l.i	ENSGT00940000159100.h.i #7	ENSGT00940000156429.t.a	ENSGT00390000001116.h	ENSGT00940000156088.c.b.g	ENSGT00940000157033.h.g	ENSGT00390000000972.e	ENSGT00940000158293.lb
Chinook salmon	MODERN SPECIES	30	dnajc24 (ENSOTSG00005014044)	ENSOTSG00005014046	mpped2 (ENSOTSG00005014048)	NAV2 (ENSOTSG00005014066)	dbx1b (ENSOTSG00005014949)	rnf141 (ENSOTSG00005014950)	AMPD3 (ENSOTSG00005014953)	lamb4 (ENSOTSG00005015132)	lamb1a (ENSOTSG00005015167)	bmt2 (ENSOTSG00005027947)	immp2l (ENSOTSG00005027949)	LRRN3 (ENSOTSG00005027951)	ENSOTSG00005027952	SLC7A10 (ENSOTSG00005027957) #11	faap24 (ENSOTSG00005028368) #16	ANKRD27 (ENSOTSG00005028370) #22	IRX5 (ENSOTSG00005028373)	rpgrip1l (ENSOTSG00005028387)	RBL2 (ENSOTSG00005029192)	SALL1 (ENSOTSG00005029332)	tent4b (ENSOTSG00005029334)	lsm14aa (ENSOTSG00005029338)	ENSOTSG00005029341	kctd15a (ENSOTSG00005029348)	CHST8 (ENSOTSG00005029350) #7	ENSOTSG00005029352	tbc1d15 (ENSOTSG00005029358)	ZFC3H1 (ENSOTSG00005029775)	PTPRB (ENSOTSG00005029780)	frs2b (ENSOTSG00005029839)	nup160 (ENSOTSG00005029842)
Coho salmon	MODERN SPECIES	24	dnajc24 (ENSOKIG00005049040)	ENSOKIG00005049056	ENSOKIG00005049070	NAV2 (ENSOKIG00005049089)	DBX1 (ENSOKIG00005049177)	RNF141 (ENSOKIG00005049179)	AMPD3 (ENSOKIG00005006881)	lamb4 (ENSOKIG00005007077)	lamb1a (ENSOKIG00005007399)	BMT2 (ENSOKIG00005008359)	immp2l (ENSOKIG00005008371)	LRRN3 (ENSOKIG00005008415)	ENSOKIG00005008423	SLC7A10 (ENSOKIG00005008505) #11	faap24 (ENSOKIG00005009164) #16	ANKRD27 (ENSOKIG00005009231) #22	IRX5 (ENSOKIG00005009348)	rpgrip1l (ENSOKIG00005009469)	RBL2 (ENSOKIG00005011148)	SALL1 (ENSOKIG00005011299)	TENT4B (ENSOKIG00005011314)	LSM14A (ENSOKIG00005011378)	ENSOKIG00005011406	KCTD15 (ENSOKIG00005011433)	CHST8 (ENSOKIG00005011466) #7	TBC1D15 (ENSOKIG00005011765)	ZFC3H1 (ENSOKIG00005014581)	PTPRB (ENSOKIG00005014685)	frs2b (ENSOKIG00005015212)	nup160 (ENSOKIG00005015245)	CTTNBP2 (ENSOKIG00005015326)
Rainbow trout	MODERN SPECIES		ENSOMYG00000002216	ENSOMYG00000002727	ENSOMYG00000002781	ENSOMYG00000003221	ENSOMYG00000004239	ENSOMYG00000007827	ENSOMYG00000014559	ENSOMYG00000063722	ENSOMYG00000014586	ENSOMYG00000014599	ENSOMYG00000062053	ENSOMYG00000014603	ENSOMYG00000071081	ENSOMYG00000014631 #11	faap24 (ENSOMYG00000014722) #16	ENSOMYG00000014824 #22	ENSOMYG00000014902	ENSOMYG00000068911	ENSOMYG00000015024	ENSOMYG00000059179	ENSOMYG00000016162	ENSOMYG00000017212	ENSOMYG00000017224	LSM14A (ENSOMYG00000017365)	ENSOMYG00000017384	ENSOMYG00000017427	CHST8 (ENSOMYG00000017454) #7	ENSOMYG00000017733	ENSOMYG00000061687	ENSOMYG00000020203	ENSOMYG00000020357
Salmoninae	ANCESTRAL SPECIES	91			ENSGT00940000156003.l.a.r	ENSGT00390000010382.c	ENSGT00390000005941.d	ENSGT00390000010852	ENSGT00550000075044.c.b	ENSGT00940000164174	ENSGT00940000160513.b.b	ENSGT00940000156482.c	ENSGT00940000156131.a.a.f	ENSGT00550000075019	ENSGT00940000156469.a.b #11	ENSGT00390000009456.o #16	ENSGT00420000029847 #19	ENSGT00940000157021.r #22	ENSGT00940000159483.a.a.e	ENSGT00520000055620.B.g.b	ENSGT00950000183202.a.b.x.b	ENSGT00940000155938.b.b.b	ENSGT00530000063759.a	ENSGT00940000158301.l.b	ENSGT00390000009212	ENSGT00940000160204	ENSGT00390000000707.y.a	ENSGT00940000154415.lb.b.a	ENSGT00390000011620.b.e.f	ENSGT00940000159496.l.j	ENSGT00940000159100.h.j #7	ENSGT00940000154318.A.b	ENSGT00950000182885.A.b
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b.f.d	ENSGT00950000182774.b.b.b	ENSGT00940000156003.l.a.r	ENSGT00390000010382.c	ENSGT00390000005941.d	ENSGT00390000010852	ENSGT00550000075044.c.b	ENSGT00940000164174	ENSGT00940000160513.b.b	ENSGT00940000156482.c	ENSGT00940000156131.a.a.f	ENSGT00550000075019	ENSGT00940000156469.a.b #11	ENSGT00390000009456.o #16	ENSGT00420000029847 #19	ENSGT00940000157021.r #22	ENSGT00940000159483.a.a.e	ENSGT00520000055620.B.g.b	ENSGT00950000183202.a.b.x.b	ENSGT00940000155938.b.b.b	ENSGT00530000063759.a	ENSGT00940000158301.l.b	ENSGT00390000009212	ENSGT00940000160204	ENSGT00390000000707.y.a	ENSGT00940000154415.lb.b.a	ENSGT00390000011620.b.e.f	ENSGT00940000159496.l.j	ENSGT00940000159100.h.j #7	ENSGT00940000154318.A.b	ENSGT00950000182885.A.b
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00390000003145.s	ENSGT00950000183011.c.a.b.f.d	ENSGT00950000182774.b.b.b	ENSGT00940000156003.l.a.r	ENSGT00390000010382.c	ENSGT00390000005941.d	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b.b	ENSGT00940000156482.c	ENSGT00940000156131.a.a.f	ENSGT00550000075019	ENSGT00940000156469.a.b #11	ENSGT00390000009456.o #16	ENSGT00420000029847 #19	ENSGT00940000157021.r #22	ENSGT00940000159483.a.a.e	ENSGT00520000055620.B.g.b	ENSGT00950000183202.a.b.x.b	ENSGT00940000155938.b.b.b	ENSGT00530000063759.a	ENSGT00940000158301.l.b	ENSGT00390000009212	ENSGT00940000160204	ENSGT00390000000707.y.a	ENSGT00940000154415.lb.b.a	ENSGT00390000011620.b.e.f	ENSGT00940000159496.l.j	ENSGT00940000159100.h.j #7	ENSGT00940000154318.A.b	ENSGT00950000182885.A.b
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00390000003145.s	ENSGT00950000183011.c.a.b.f.d	ENSGT00950000182774.b.b.b	ENSGT00940000156003.l.a.r	ENSGT00390000010382.c	ENSGT00390000005941.d	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b.b	ENSGT00940000156482.c	ENSGT00940000156131.a.a.f	ENSGT00550000075019	ENSGT00940000156469.a.b #11	ENSGT00390000009456.o #16	ENSGT00420000029847 #19	ENSGT00940000157021.r #22	ENSGT00940000159483.a.a.e	ENSGT00520000055620.B.g.b	ENSGT00950000183202.a.b.x.b	ENSGT00940000155938.b.b.b	ENSGT00530000063759.a	ENSGT00940000158301.l.b	ENSGT00390000009212	ENSGT00940000160204	ENSGT00390000000707.y.a	ENSGT00940000154415.lb.b.a	ENSGT00390000011620.b.e.f	ENSGT00940000159496.l.j	ENSGT00940000159100.h.j #7	ENSGT00940000154318.A.b	ENSGT00950000182885.A.b
Coho salmon	MODERN SPECIES	14	rnf141 (ENSOKIG00005028186)	ENSOKIG00005028196	LAMB1 (ENSOKIG00005028611)	bmt2 (ENSOKIG00005036356)	TMEM168 (ENSOKIG00005036370)	znf277 (ENSOKIG00005036447)	ENSOKIG00005037513	ENSOKIG00005037540	ENSOKIG00005037550	amfra (ENSOKIG00005037562)	ENSOKIG00005037588	DUS2 (ENSOKIG00005037660)	SLC7A10 (ENSOKIG00005038586) #11	faap24 (ENSOKIG00005038774) #16	ENSOKIG00005038784 #19	ANKRD27 (ENSOKIG00005038857) #22	IRX5 (ENSOKIG00005038960)	ENSOKIG00005038970	RBL2 (ENSOKIG00005039040)	SALL1 (ENSOKIG00005039429)	SNX20 (ENSOKIG00005039443)	ENSOKIG00005039482	mphosph6 (ENSOKIG00005039772)	hsd17b2 (ENSOKIG00005039793)	gpia (ENSOKIG00005040066)	lsm14aa (ENSOKIG00005044921)	ENSOKIG00005044973	KCTD15 (ENSOKIG00005044989)	ENSOKIG00005044996	CHST8 (ENSOKIG00005045003) #7	ENSOKIG00005045014
Chinook salmon	MODERN SPECIES	10	OLFML1 (ENSOTSG00005037192)	syt9b (ENSOTSG00005037193)	spon1b (ENSOTSG00005037201)	hipk3a (ENSOTSG00005038512)	DEPDC7 (ENSOTSG00005038513)	ENSOTSG00005038514	wt1a (ENSOTSG00005038515)	LRRN3 (ENSOTSG00005038779)	ENSOTSG00005038781	amfra (ENSOTSG00005038786)	ENSOTSG00005038820	DUS2 (ENSOTSG00005038831)	SLC7A10 (ENSOTSG00005038869) #11	faap24 (ENSOTSG00005038871) #16	ENSOTSG00005038876 #19	ANKRD27 (ENSOTSG00005038903) #22	IRX5 (ENSOTSG00005039029)	RBL2 (ENSOTSG00005039041)	SALL1 (ENSOTSG00005039333)	SNX20 (ENSOTSG00005039338)	tent4b (ENSOTSG00005039351)	mphosph6 (ENSOTSG00005039468)	hsd17b2 (ENSOTSG00005039471)	gpia (ENSOTSG00005039480)	lsm14aa (ENSOTSG00005040167)	ENSOTSG00005040169	kctd15a (ENSOTSG00005006555)	CHST8 (ENSOTSG00005006558) #7	ENSOTSG00005006560	tph2 (ENSOTSG00005006563)	tbc1d15 (ENSOTSG00005006836)
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000004918	ENSOMYG00000004751	ENSOMYG00000004933	ENSOMYG00000005620	bmt2 (ENSOMYG00000006000)	TMEM168 (ENSOMYG00000006022)	znf277 (ENSOMYG00000006558)	ENSOMYG00000006825	ENSOMYG00000006835	amfra (ENSOMYG00000007104)	ENSOMYG00000007192	ENSOMYG00000008091	ENSOMYG00000008646 #11	faap24 (ENSOMYG00000008686) #16	ENSOMYG00000008764 #19	ENSOMYG00000008891 #22	ENSOMYG00000061906	ENSOMYG00000008919	ENSOMYG00000053257	ENSOMYG00000009205	ENSOMYG00000010051	ENSOMYG00000058232	ENSOMYG00000010055	ENSOMYG00000010133	mphosph6 (ENSOMYG00000010223)	hsd17b2 (ENSOMYG00000010229)	gpia (ENSOMYG00000010468)	ENSOMYG00000063934	ENSOMYG00000010647	KCTD15 (ENSOMYG00000010672)	CHST8 (ENSOMYG00000010677) #7
Salmo	ANCESTRAL SPECIES	45	ENSGT00390000003145.s	ENSGT00950000183011.c.a.b.f.d	ENSGT00950000182774.b.b.b	ENSGT00940000156003.l.a.r	ENSGT00390000010382.c	ENSGT00390000005941.d	ENSGT00390000010852	ENSGT00550000075044.c.b	ENSGT00940000160513.b.b	ENSGT00940000156482.c.g	ENSGT00940000156131.a.a.f	ENSGT00550000075019	ENSGT00940000156469.a.b #11	ENSGT00390000009456.o #16	ENSGT00420000029847 #19	ENSGT00940000157021.r #22	ENSGT00940000159483.a.a.e	ENSGT00520000055620.B.g.b	ENSGT00950000183202.a.b.x.b	ENSGT00940000155938.b.b.b	ENSGT00530000063759.a	ENSGT00940000158301.l.b	ENSGT00390000009212	ENSGT00940000160204	ENSGT00390000000707.y.a	ENSGT00940000154415.lb.b.a	ENSGT00390000011620.b.e.f	ENSGT00940000159496.l.j	ENSGT00940000159100.h.j #7	ENSGT00940000154318.A.b	ENSGT00950000182885.A.b
River trout	MODERN SPECIES	37	AMPD3 (ENSSTUG00000021067)	ENSSTUG00000023676	lamb1a (ENSSTUG00000023755)	ENSSTUG00000026124	bmt2 (ENSSTUG00000026133)	TMEM168 (ENSSTUG00000026146)	znf277 (ENSSTUG00000026168)	ENSSTUG00000026527	LRRN3 (ENSSTUG00000026556)	amfra (ENSSTUG00000026580)	ENSSTUG00000027098	DUS2 (ENSSTUG00000027116)	SLC7A10 (ENSSTUG00000027339) #11	faap24 (ENSSTUG00000027369) #16	ENSSTUG00000027377 #19	ANKRD27 (ENSSTUG00000027413) #22	IRX5 (ENSSTUG00000027497)	RBL2 (ENSSTUG00000027505)	SALL1 (ENSSTUG00000027572)	SNX20 (ENSSTUG00000027582)	TENT4B (ENSSTUG00000027589)	mphosph6 (ENSSTUG00000027656)	hsd17b2 (ENSSTUG00000027667)	gpia (ENSSTUG00000027700)	lsm14aa (ENSSTUG00000028457)	ENSSTUG00000028474	kctd15a (ENSSTUG00000028563)	CHST8 (ENSSTUG00000028574) #7	ENSSTUG00000028614	CHST8 (ENSSTUG00000028629) #7	ENSSTUG00000028670
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000107694	ENSSSAG00000111823	ENSSSAG00000068297	bmt2 (ENSSSAG00000121522)	TMEM168 (ENSSSAG00000087100)	znf277 (ENSSSAG00000049782)	immp2l (ENSSSAG00000106762)	LRRN3 (ENSSSAG00000089961)	amfra (ENSSSAG00000051806)	ENSSSAG00000082477	ENSSSAG00000051983	ENSSSAG00000090580 #11	faap24 (ENSSSAG00000111213) #16	ENSSSAG00000054761 #19	ENSSSAG00000099467	ENSSSAG00000054852 #22	ENSSSAG00000055101	ENSSSAG00000055119	ENSSSAG00000055151	ENSSSAG00000055327	ENSSSAG00000120378	ENSSSAG00000055348	hsd17b2 (ENSSSAG00000103360)	GPI (ENSSSAG00000055699)	lsm14aa (ENSSSAG00000058467)	ENSSSAG00000058489	KCTD15 (ENSSSAG00000091155)	CHST8 (ENSSSAG00000058555) #7	ENSSSAG00000058580	ENSSSAG00000058616	ENSSSAG00000059489
Huchen	MODERN SPECIES	890										amfra (ENSHHUG00000028056)	ENSHHUG00000028264	DUS2 (ENSHHUG00000028273)	SLC7A10 (ENSHHUG00000028314) #11	faap24 (ENSHHUG00000028357) #16	ENSHHUG00000028368 #19	ANKRD27 (ENSHHUG00000028469) #22	IRX5 (ENSHHUG00000028510)	ENSHHUG00000028511	RBL2 (ENSHHUG00000028514)	SNX20 (ENSHHUG00000028543)	SALL1 (ENSHHUG00000028547)	TENT4B (ENSHHUG00000028550)	mphosph6 (ENSHHUG00000028558)	hsd17b2 (ENSHHUG00000028570)	gpia (ENSHHUG00000028573)	lsm14aa (ENSHHUG00000029006)	ENSHHUG00000029013	kctd15a (ENSHHUG00000029052)	ENSHHUG00000029060	CHST8 (ENSHHUG00000029061) #7	ENSHHUG00000029063
Northern pike	MODERN SPECIES	18	lamb4 (ENSELUG00000016958)	lamb1a (ENSELUG00000017039)	bmt2 (ENSELUG00000017078)	TMEM168 (ENSELUG00000017110)	ENSELUG00000026447	znf277 (ENSELUG00000017157)	LRRN3 (ENSELUG00000024807)	immp2l (ENSELUG00000017229)	amfra (ENSELUG00000017270)	ENSELUG00000017288	DUS2 (ENSELUG00000017339)	SLC7A10 (ENSELUG00000001270) #11	faap24 (ENSELUG00000028712) #16	ENSELUG00000017494 #19	ENSELUG00000031328	ANKRD27 (ENSELUG00000017570) #22	IRX5 (ENSELUG00000017608)	ENSELUG00000017634	ENSELUG00000017658	rpgrip1l (ENSELUG00000017693)	RBL2 (ENSELUG00000017736)	SALL1 (ENSELUG00000017774)	SNX20 (ENSELUG00000017791)	tent4b (ENSELUG00000017815)	mphosph6 (ENSELUG00000017839)	hsd17b2 (ENSELUG00000017899)	gpia (ENSELUG00000017973)	lsm14aa (ENSELUG00000018038)	ENSELUG00000018066	kctd15a (ENSELUG00000018083)	ENSELUG00000025420
Acanthomorphata	ANCESTRAL SPECIES	84					ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT01100000264203	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	38	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT01100000264203	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b
Percomorphaceae	ANCESTRAL SPECIES	31	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT01100000264203	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	496	ENSHCOG00000009794	ENSHCOG00000009758	MYOD1 (ENSHCOG00000009682)	ENSHCOG00000009665	CACNA2D4 (ENSHCOG00000009660)	LRTM2 (ENSHCOG00000009629)	ENSHCOG00000009616	ENSHCOG00000009602	urahb (ENSHCOG00000009505)	SLC7A10 (ENSHCOG00000009496) #11	DUS2 (ENSHCOG00000009462)	ENSHCOG00000009421	ENSHCOG00000009337	immp2l (ENSHCOG00000009329)	znf277 (ENSHCOG00000009285)	ENSHCOG00000009038 #22	ENSHCOG00000009005 #22	ENSHCOG00000009000	RFWD3 (ENSHCOG00000008987)	GLG1 (ENSHCOG00000008975)	ENSHCOG00000008860
Tiger tail seahorse	MODERN SPECIES	496	ENSHCOG00000009758	MYOD1 (ENSHCOG00000009682)	ENSHCOG00000009665	CACNA2D4 (ENSHCOG00000009660)	LRTM2 (ENSHCOG00000009629)	ENSHCOG00000009616	ENSHCOG00000009602	urahb (ENSHCOG00000009505)	SLC7A10 (ENSHCOG00000009496) #11	DUS2 (ENSHCOG00000009462)	ENSHCOG00000009421	ENSHCOG00000009337	immp2l (ENSHCOG00000009329)	znf277 (ENSHCOG00000009285)	ENSHCOG00000009038 #22	ENSHCOG00000009005 #22	ENSHCOG00000009000	RFWD3 (ENSHCOG00000008987)	GLG1 (ENSHCOG00000008975)	ENSHCOG00000008860
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b	ENSGT00940000169557
Atherinomorphae	ANCESTRAL SPECIES	32	ENSGT00390000008748.b.h	ENSGT00940000155465.j	ENSGT00940000164138	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00390000010852	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000169557	ENSGT00940000177178	ENSGT00940000167812	ENSGT00940000153901.a.b.b	ENSGT01030000234588.b.b.b.b.a.b.a.c.b	ENSGT01030000234588.b.b.b.b.a.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	34	ENSGT00940000164099.a.b	ENSGT00940000155465.j	ENSGT00940000164138	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00390000010852	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000010961.d	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000169557	ENSGT00940000177178	ENSGT00940000167812	ENSGT00940000153901.a.b.b
Aplocheiloidei	ANCESTRAL SPECIES	200													ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000010961.d	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b
Mangrove rivulus	MODERN SPECIES	607														immp2l (ENSKMAG00000007996)	ENSKMAG00000008031 #19	ANKRD27 (ENSKMAG00000008069) #22
Turquoise killifish	MODERN SPECIES	97														SLC7A10 (ENSNFUG00015017586) #11	C19ORF40 (ENSNFUG00015017620) #16	ANKRD27 (ENSNFUG00015017643) #22	TMED6 (ENSNFUG00015017681)	RFWD3 (ENSNFUG00015017691)	GLG1 (ENSNFUG00015017735)
Cyprinodontoidei	ANCESTRAL SPECIES	87					ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00390000010852	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000010961.d	ENSGT00390000016453.e
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00390000017767.a.b	ENSGT00390000010968.a	ENSGT00940000164955.b	ENSGT00940000156976.gb	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00390000010852	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000010961.d	ENSGT00990000204976	ENSGT00390000016453.e
Poecilia	ANCESTRAL SPECIES	146																ENSGT00940000157021 #22	ENSGT00390000010961.d	ENSGT00990000204976	ENSGT00390000016453.e
Guppy	MODERN SPECIES	461	ENSPREG00000018792	ENSPREG00000018780	ZNF608 (ENSPREG00000018755)	ENSPREG00000018740	CEP120 (ENSPREG00000018710)	ENSPREG00000018694	ENSPREG00000018687	PRDM6 (ENSPREG00000018667)	PPIC (ENSPREG00000018642)	ENSPREG00000018629	SNX2 (ENSPREG00000018578)	sncaip (ENSPREG00000018488)	ENSPREG00000018471	ENSPREG00000018414	ENSPREG00000018326	ENSPREG00000018279 #22	TMED6 (ENSPREG00000018273)	ENSPREG00000018259	ENSPREG00000018255	ENSPREG00000018237	ENSPREG00000018214	ENSPREG00000018204	ENSPREG00000018153	SLC18A1 (ENSPREG00000018126)	ENSPREG00000018113	ppiab (ENSPREG00000017903)	ZMIZ2 (ENSPREG00000017865)	OGDH (ENSPREG00000017849)	adam9 (ENSPREG00000017661)	ercc6l (ENSPREG00000017617)	si:ch211-191j22.3 (ENSPREG00000017607)
NAME_6	ANCESTRAL SPECIES	664																ENSGT00940000157021 #22	ENSGT00390000010961.d
Sailfin molly	MODERN SPECIES	1282												ENSPLAG00000019422	plekhb1 (ENSPLAG00000019410)	sc5d (ENSPLAG00000019401)	ENSPLAG00000019383	ENSPLAG00000019372 #22	dhrsx (ENSPLAG00000019366)	sowahcb (ENSPLAG00000019359)	ENSPLAG00000019348	ENSPLAG00000019329
Amazon molly	MODERN SPECIES	293	mettl3 (ENSPFOG00000012920)	ttc5 (ENSPFOG00000012975)	CCNB1IP1 (ENSPFOG00000013018)	ENSPFOG00000023705	slc7a7 (ENSPFOG00000013029)	oxa1l (ENSPFOG00000013106)	ENSPFOG00000013172	ENSPFOG00000023252	ENSPFOG00000013174	ENSPFOG00000013179	ENSPFOG00000013198	ENSPFOG00000013201	ENSPFOG00000013208	ENSPFOG00000022729	ENSPFOG00000023005	ANKRD27 (ENSPFOG00000013221) #22	TMED6 (ENSPFOG00000013389)	ENSPFOG00000021783	ENSPFOG00000013429
Platyfish	MODERN SPECIES	11	myod1 (ENSXMAG00000026443)	CACNA2D4 (ENSXMAG00000029376)	ENSXMAG00000025768	ENSXMAG00000002743	CPA1 (ENSXMAG00000008217)	ENSXMAG00000000273	GPR37 (ENSXMAG00000000281)	immp2l (ENSXMAG00000029951)	ENSXMAG00000023358	ENSXMAG00000012291	pdcd2l (ENSXMAG00000012292)	DUS2 (ENSXMAG00000012268)	SLC7A10 (ENSXMAG00000012176) #11	faap24 (ENSXMAG00000024585) #16	ENSXMAG00000020908 #19	ANKRD27 (ENSXMAG00000009561) #22	TMED6 (ENSXMAG00000009569)	ENSXMAG00000028663	ENSXMAG00000009573	ENSXMAG00000028310	ENSXMAG00000009578	ENSXMAG00000007747	ENSXMAG00000023693	ENSXMAG00000016066	ENSXMAG00000026565	NTRK3 (ENSXMAG00000016085)	pard6a (ENSXMAG00000016111)	ENSXMAG00000021748	gal (ENSXMAG00000016121)	ENSXMAG00000016131	bcar1 (ENSXMAG00000020876)
NAME_4	ANCESTRAL SPECIES	467															ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000010961.d	ENSGT00390000016453.e
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	1007														ENSCVAG00000000116	ENSCVAG00000004277 #19	ENSCVAG00000000120 #22	ENSCVAG00000004296 #22	ENSCVAG00000004302	TMED6 (ENSCVAG00000004306)	ENSCVAG00000000123	ENSCVAG00000004389	ENSCVAG00000004390	ENSCVAG00000004504
Sheepshead minnow	MODERN SPECIES	1007													ENSCVAG00000000116	ENSCVAG00000004277 #19	ENSCVAG00000000120 #22	ENSCVAG00000004296 #22	ENSCVAG00000004302	TMED6 (ENSCVAG00000004306)	ENSCVAG00000000123	ENSCVAG00000004389	ENSCVAG00000004390	ENSCVAG00000004504
Mummichog	MODERN SPECIES	1330																ENSFHEG00000008783 #22
Oryzias	ANCESTRAL SPECIES	71	ENSGT00950000183008.a.b	ENSGT00940000166017	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT01100000263924	ENSGT00940000159189	ENSGT00390000009899.a.d	ENSGT00390000014700.b.a.a	ENSGT00940000155112.A.c	ENSGT00940000156672.o.a	ENSGT00940000153717.b.g	ENSGT00940000164138	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22
Oryzias_b	ANCESTRAL SPECIES		ENSGT00940000166017	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT00940000170837	ENSGT01100000263924	ENSGT00940000159189	ENSGT00390000009899.a.d	ENSGT00390000014700.b.a.a	ENSGT00940000155112.A.c	ENSGT00940000156672.o.a	ENSGT00940000153717.b.g	ENSGT00940000164138	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT01030000234534.B.a.b.a.a	ENSGT00940000155529.A	ENSGT00940000157182.g.a	ENSGT00940000160055	ENSGT00940000168725	ENSGT00950000182839.A.d.a.a	ENSGT00950000182956.b.b.a.a.c.b	ENSGT00950000183194.a.b.f	ENSGT00940000158780.e.f	ENSGT00390000000221.A.d	ENSGT00390000006367.d	ENSGT00940000153962.a	ENSGT00940000159028.f
Indian medaka	MODERN SPECIES	15	bcar1 (ENSOMEG00000021126)	zgc:158868 (ENSOMEG00000021143)	lrp5 (ENSOMEG00000021239)	ENSOMEG00000021268	ENSOMEG00000021283	tmem170a (ENSOMEG00000021292)	ppp6r3 (ENSOMEG00000021449)	ric8a (ENSOMEG00000021545)	carmil2 (ENSOMEG00000021597)	ctcf (ENSOMEG00000021667)	ripor1 (ENSOMEG00000021717)	ENSOMEG00000021740	SLC7A10 (ENSOMEG00000021797) #11	faap24 (ENSOMEG00000021815) #16	ENSOMEG00000021862 #19	ANKRD27 (ENSOMEG00000021939) #22	ENSOMEG00000021953	ciao2a (ENSOMEG00000021981)	spg11 (ENSOMEG00000022049)	ENSOMEG00000022093	ENSOMEG00000022127	arnt2 (ENSOMEG00000022178)	ENSOMEG00000022263	fah (ENSOMEG00000022292)	mthfs (ENSOMEG00000022310)	MINAR1 (ENSOMEG00000022358)	ENSOMEG00000022452	ENSOMEG00000002354	ENSOMEG00000002358	tollip (ENSOMEG00000002369)	celf1 (ENSOMEG00000002381)
Javanese ricefish	MODERN SPECIES	20	zgc:158868 (ENSOJAG00000000923)	lrp5 (ENSOJAG00000000774)	ENSOJAG00000000699	ENSOJAG00000000691	tmem170a (ENSOJAG00000000684)	ppp6r3 (ENSOJAG00000000517)	ric8a (ENSOJAG00000000381)	carmil2 (ENSOJAG00000000346)	ctcf (ENSOJAG00000000319)	ripor1 (ENSOJAG00000000249)	ENSOJAG00000000145	SLC7A10 (ENSOJAG00000000115) #11	faap24 (ENSOJAG00000019529) #16	ENSOJAG00000019333 #19	ska1 (ENSOJAG00000019311)	ANKRD27 (ENSOJAG00000018237) #22	ENSOJAG00000018204	spg11 (ENSOJAG00000018013)	ENSOJAG00000017998	ENSOJAG00000017124	ANO1 (ENSOJAG00000014902)	ENSOJAG00000014735	ENSOJAG00000014721	RASSF10 (ENSOJAG00000014682)	tead1a (ENSOJAG00000014521)	parvaa (ENSOJAG00000014357)	mical2b (ENSOJAG00000014291)	dkk3b (ENSOJAG00000014268)	far1 (ENSOJAG00000014129)	cyb5r2 (ENSOJAG00000013965)	poglut3 (ENSOJAG00000013948)
Oryzias_a	ANCESTRAL SPECIES	92	ENSGT00950000183008.a.b	ENSGT00940000166017	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT01100000263924	ENSGT00940000159189	ENSGT00390000009899.a.d	ENSGT00390000014700.b.a.a	ENSGT00940000155112.A.c	ENSGT00940000156672.o.a	ENSGT00940000153717.b.g	ENSGT00940000164138	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22
Japanese Medaka HdrR	MODERN SPECIES	20	ENSORLG00000025444	zgc:158868 (ENSORLG00000018559)	lrp5 (ENSORLG00000018545)	ENSORLG00000024142	ENSORLG00000018483	tmem170a (ENSORLG00000030172)	ppp6r3 (ENSORLG00000018456)	ric8a (ENSORLG00000018382)	carmil2 (ENSORLG00000018366)	ENSORLG00000018357	ripor1 (ENSORLG00000018344)	ENSORLG00000018329	ENSORLG00000018320 #11	faap24 (ENSORLG00000025560) #16	ENSORLG00000027859 #19	ANKRD27 (ENSORLG00000018302) #22	slc13a1 (ENSORLG00000000145)	ENSORLG00000000155	tbc1d15 (ENSORLG00000000184)	tph2 (ENSORLG00000000223)	mphosph6 (ENSORLG00000000232)	gpia (ENSORLG00000000249)	ENSORLG00000000264	ENSORLG00000028042	ENSORLG00000000271	lamb1a (ENSORLG00000000356)	cetp (ENSORLG00000000375)	herpud1 (ENSORLG00000000388)	slc12a3 (ENSORLG00000000412)	ENSORLG00000000419	ENSORLG00000024966
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b	ENSGT01030000234588.b.b.b.b.a.b.a.c.a.b.b
Cichlidae	ANCESTRAL SPECIES	34	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000016453.d	ENSGT00390000010961.d	ENSGT00390000016453.c	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812	ENSGT00940000153901.a.b.b	ENSGT00940000169557
Pseudocrenilabrinae	ANCESTRAL SPECIES	42	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000016453.d	ENSGT00390000010961.d
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	30	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000016453.d	ENSGT00390000010961.d	ENSGT00950000182939.a.b.b	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00940000155044.B	ENSGT00950000182996.b.b.c.b.b.b.a.a.a	ENSGT00940000155456.f	ENSGT00390000015889	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057
Haplochromini	ANCESTRAL SPECIES	27	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000016453.d	ENSGT00950000182939.a.b.b	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00940000155044.B	ENSGT00950000182996.b.b.c.b.b.b.a.a.a	ENSGT00940000155456.f	ENSGT00390000015889	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458
Burton s mouthbrooder	MODERN SPECIES	472					CIAO2A (ENSHBUG00000019291)	spg11 (ENSHBUG00000019803)	ENSHBUG00000020074	LRRN3 (ENSHBUG00000020096)	immp2l (ENSHBUG00000020133)	pdcd2l (ENSHBUG00000020147)	ENSHBUG00000020179	DUS2 (ENSHBUG00000020267)	SLC7A10 (ENSHBUG00000020334) #11	faap24 (ENSHBUG00000020344) #16	ENSHBUG00000020426 #19	ANKRD27 (ENSHBUG00000020453) #22	ENSHBUG00000020470	ARHGAP8 (ENSHBUG00000020480)	PHF21B (ENSHBUG00000020490)	nup50 (ENSHBUG00000020494)	kiaa0930 (ENSHBUG00000020506)	fbxo7 (ENSHBUG00000020526)	rtcb (ENSHBUG00000020571)	xpot (ENSHBUG00000020681)	rpl18a (ENSHBUG00000020728)
Haplochromini_A	ANCESTRAL SPECIES	25	ENSGT01030000234534.B.a.b.a.a	ENSGT00940000181996	ENSGT00390000017697.a.eb.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000016453.d	ENSGT00950000182939.a.b.b	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00940000155044.B	ENSGT00950000182996.b.b.c.b.b.b.a.a.a	ENSGT00940000155456.f	ENSGT00390000015889	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458
P. nyererei	MODERN SPECIES	449	CLN6 (ENSPNYG00000023044)	CALML4 (ENSPNYG00000023026)	ENSPNYG00000023015	ENSPNYG00000023010	ciao2a (ENSPNYG00000023005)	spg11 (ENSPNYG00000022985)	ENSPNYG00000022971	LRRN3 (ENSPNYG00000022967)	immp2l (ENSPNYG00000022960)	pdcd2l (ENSPNYG00000022955)	ENSPNYG00000022942	DUS2 (ENSPNYG00000022914)	SLC7A10 (ENSPNYG00000022898) #11	faap24 (ENSPNYG00000022883) #16	ENSPNYG00000022866 #19	ANKRD27 (ENSPNYG00000022851) #22	ENSPNYG00000022840
Haplochromini_B	ANCESTRAL SPECIES	67	ENSGT01030000234534.B.a.b.a.a	ENSGT00940000181996	ENSGT00390000017697.a.eb.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00390000010852.m.a	ENSGT00940000164174	ENSGT00390000010852.m.b.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000016453.d.b	ENSGT00390000016453.d.a
Zebra mbuna	MODERN SPECIES	178									ENSMZEG00005024222	ENSMZEG00005024221	ENSMZEG00005024220	DUS2 (ENSMZEG00005024219)	SLC7A10 (ENSMZEG00005024217) #11	faap24 (ENSMZEG00005024216) #16	ENSMZEG00005024214 #19	ANKRD27 (ENSMZEG00005024211) #22	ENSMZEG00005024207	ENSMZEG00005024203	znf277 (ENSMZEG00005024201)
Eastern happy	MODERN SPECIES	19	ENSACLG00000023243	siah1 (ENSACLG00000023251)	CIAO2A (ENSACLG00000023268)	spg11 (ENSACLG00000023303)	ENSACLG00000023531	ENSACLG00000023546	znf277 (ENSACLG00000023549)	immp2l (ENSACLG00000023676)	ENSACLG00000023686	LRRN3 (ENSACLG00000023690)	ENSACLG00000023729	ENSACLG00000023698	DUS2 (ENSACLG00000023737)	SLC7A10 (ENSACLG00000023774) #11	faap24 (ENSACLG00000023802) #16	ANKRD27 (ENSACLG00000023816) #22	ENSACLG00000023848	ENSACLG00000023892	znf277 (ENSACLG00000023913)	TMED6 (ENSACLG00000023992)	znf277 (ENSACLG00000023999)	chka (ENSACLG00000024309)	cetp (ENSACLG00000024326)	herpud1 (ENSACLG00000024345)	slc12a3 (ENSACLG00000024371)	ENSACLG00000024452	galnt18a (ENSACLG00000024512)	zgc:162634 (ENSACLG00000024539)	tat (ENSACLG00000024554)	ENSACLG00000024594	pdf (ENSACLG00000024630)
Lyretail cichlid	MODERN SPECIES	402				ENSNBRG00000018446	spg11 (ENSNBRG00000018216)	ENSNBRG00000018140	ENSNBRG00000018115	ENSNBRG00000018104	ENSNBRG00000018084	ENSNBRG00000018069	pdcd2l (ENSNBRG00000018060)	DUS2 (ENSNBRG00000018031)	ENSNBRG00000018009	SLC7A10 (ENSNBRG00000017967) #11	ENSNBRG00000017878 #19	ANKRD27 (ENSNBRG00000017808) #22	ENSNBRG00000017773	TMED6 (ENSNBRG00000017737)	chka (ENSNBRG00000017689)	cetp (ENSNBRG00000017643)	ENSNBRG00000017634	slc12a3 (ENSNBRG00000017195)	galnt18a (ENSNBRG00000017054)	PIGY (ENSNBRG00000017047)	tat (ENSNBRG00000017026)	ENSNBRG00000017017	pdf (ENSNBRG00000017010)	ENSNBRG00000016999	ENSNBRG00000016983	vps9d1 (ENSNBRG00000016884)	ENSNBRG00000016861
Nile tilapia	MODERN SPECIES	19	ENSONIG00000021299	ciao2a (ENSONIG00000028647)	spg11 (ENSONIG00000010600)	ENSONIG00000010602	ENSONIG00000038801	znf277 (ENSONIG00000010608)	immp2l (ENSONIG00000036435)	LRRN3 (ENSONIG00000021300)	ENSONIG00000010612	ENSONIG00000010613	DUS2 (ENSONIG00000010614)	ENSONIG00000031680	SLC7A10 (ENSONIG00000010619) #11	faap24 (ENSONIG00000010629) #16	ENSONIG00000010630 #19	ANKRD27 (ENSONIG00000010635) #22	ENSONIG00000010647	ENSONIG00000029844	ENSONIG00000040531	ENSONIG00000010649	ENSONIG00000038407	ENSONIG00000030463	lamb1a (ENSONIG00000017383)	ENSONIG00000017391	IRX5 (ENSONIG00000018236)	RBL2 (ENSONIG00000018239)	KCTD15 (ENSONIG00000018241)	CHST8 (ENSONIG00000027541) #7	ENSONIG00000035628	ENSONIG00000027880	ENSONIG00000029449
Midas cichlid	MODERN SPECIES	1010															ENSACIG00000021652 #19	ANKRD27 (ENSACIG00000021609) #22	ENSACIG00000021571	TMED6 (ENSACIG00000021545)	MLKL (ENSACIG00000021522)	RFWD3 (ENSACIG00000021482)	GLG1 (ENSACIG00000021420)	ENSACIG00000021404	urahb (ENSACIG00000021391)	ENSACIG00000021343	ENSACIG00000021328	LRTM2 (ENSACIG00000021314)	CACNA2D4 (ENSACIG00000021269)
Pomacentridae	ANCESTRAL SPECIES	68	ENSGT00940000153717.b.g	ENSGT00390000005430	ENSGT00940000155391.a.a	ENSGT00940000161262.b	ENSGT00940000154617.B.d	ENSGT00390000016791	ENSGT00390000017697.a	ENSGT00940000164138	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b	ENSGT00940000167812
Pomacentridae_A	ANCESTRAL SPECIES	91												ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b	ENSGT00940000167812
Amphiprion	ANCESTRAL SPECIES	115												ENSGT00940000156469.a #11	ENSGT01100000265728	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b	ENSGT00940000167812
Clown anemonefish	MODERN SPECIES	3577												SLC7A10 (ENSAOCG00000016356) #11	ENSAOCG00000016371	faap24 (ENSAOCG00000016379) #16	ENSAOCG00000016463 #19	ANKRD27 (ENSAOCG00000016477) #22	ZDHHC7 (ENSAOCG00000016500)	TMED6 (ENSAOCG00000016508)	MLKL (ENSAOCG00000016528)	RFWD3 (ENSAOCG00000016548)	GLG1 (ENSAOCG00000001158)	ENSAOCG00000016858	urahb (ENSAOCG00000016894)	ENSAOCG00000016926	LRTM2 (ENSAOCG00000002572)	CACNA2D4 (ENSAOCG00000017314)	zgc:172145 (ENSAOCG00000017358)	myod1 (ENSAOCG00000017364)	tnnt3a (ENSAOCG00000017403)	ENSAOCG00000017418	ENSAOCG00000017436
Orange clownfish	MODERN SPECIES	18	ENSAPEG00000014376	MGAT4C (ENSAPEG00000014387)	NTS (ENSAPEG00000014407)	RASSF9 (ENSAPEG00000014425)	alx1 (ENSAPEG00000014451)	SLC6A15 (ENSAPEG00000014462)	lrrk2 (ENSAPEG00000014513)	slc2a13b (ENSAPEG00000014672)	KIF21A (ENSAPEG00000014726)	ENSAPEG00000014949	snrpd1 (ENSAPEG00000014961)	SLC7A10 (ENSAPEG00000014970) #11	ENSAPEG00000015025	faap24 (ENSAPEG00000015042) #16	ENSAPEG00000015105 #19	ANKRD27 (ENSAPEG00000015258) #22	ZDHHC7 (ENSAPEG00000015293)	TMED6 (ENSAPEG00000015317)	MLKL (ENSAPEG00000015334)	RFWD3 (ENSAPEG00000015379)	GLG1 (ENSAPEG00000015395)	ENSAPEG00000015507	urahb (ENSAPEG00000015634)	ENSAPEG00000015651	CACNA2D4 (ENSAPEG00000015687)	LRTM2 (ENSAPEG00000016139)	ENSAPEG00000016163	tnnt3a (ENSAPEG00000016176)	myod1 (ENSAPEG00000016219)	ENSAPEG00000016238	ENSAPEG00000016255
Spiny chromis	MODERN SPECIES	1678													SLC7A10 (ENSAPOG00000006501) #11	faap24 (ENSAPOG00000006444) #16	ENSAPOG00000006421 #19	ANKRD27 (ENSAPOG00000006366) #22
Bicolor damselfish	MODERN SPECIES	2061																ANKRD27 (ENSSPAG00000008722) #22	ZDHHC7 (ENSSPAG00000008764)	TMED6 (ENSSPAG00000008787)	ENSSPAG00000008820	RFWD3 (ENSSPAG00000008834)
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00940000164138	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00390000010852	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000169557
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00390000010852	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000177178
Climbing perch	MODERN SPECIES	19	ENSATEG00000012236	CALML4 (ENSATEG00000012190)	ENSATEG00000012186	ENSATEG00000012164	ENSATEG00000029813	ENSATEG00000012021	znf277 (ENSATEG00000011973)	ENSATEG00000011966	immp2l (ENSATEG00000011937)	amfra (ENSATEG00000011862)	ENSATEG00000011852	ENSATEG00000011799	ENSATEG00000011729	ENSATEG00000011680 #11	ENSATEG00000011608 #19	ENSATEG00000011562 #22	ENSATEG00000011510	ENSATEG00000011469	ENSATEG00000011436	ENSATEG00000027365	MLKL (ENSATEG00000011422)	ENSATEG00000011399	GLG1 (ENSATEG00000011236)	ENSATEG00000011076	urahb (ENSATEG00000027908)	ENSATEG00000011010	ENSATEG00000027583	ENSATEG00000026163	ENSATEG00000010873	zgc:172145 (ENSATEG00000010861)	myod1 (ENSATEG00000010852)
Siamese fighting fish	MODERN SPECIES	17	CALML4 (ENSBSLG00000003617)	ENSBSLG00000003582	ciao2a (ENSBSLG00000003078)	spg11 (ENSBSLG00000003065)	ENSBSLG00000003057	znf277 (ENSBSLG00000002845)	LRRN3 (ENSBSLG00000002752)	immp2l (ENSBSLG00000002732)	amfra (ENSBSLG00000002451)	pdcd2l (ENSBSLG00000002389)	ENSBSLG00000002294	DUS2 (ENSBSLG00000002249)	SLC7A10 (ENSBSLG00000002228) #11	faap24 (ENSBSLG00000002216) #16	ENSBSLG00000002153 #19	ANKRD27 (ENSBSLG00000001778) #22	ZDHHC7 (ENSBSLG00000001761)	ENSBSLG00000001753	TMED6 (ENSBSLG00000001747)	ENSBSLG00000001740	rlbp1b (ENSBSLG00000001714)	ENSBSLG00000001708	pdia3 (ENSBSLG00000001620)	ckmt1 (ENSBSLG00000001433)	ENSBSLG00000001334	si:ch1073-281m9.1 (ENSBSLG00000001326)	alkbh3 (ENSBSLG00000001318)	hsd17b12a (ENSBSLG00000001264)	ENSBSLG00000001192	api5 (ENSBSLG00000000828)	samm50 (ENSBSLG00000000743)
Zig-zag eel	MODERN SPECIES	20	ENSMAMG00000014520	ENSMAMG00000014487	CALML4 (ENSMAMG00000014454)	ENSMAMG00000014444	ENSMAMG00000027114	ENSMAMG00000014046	znf277 (ENSMAMG00000014006)	ENSMAMG00000013999	immp2l (ENSMAMG00000013928)	ENSMAMG00000013867 #19	faap24 (ENSMAMG00000025588) #16	ENSMAMG00000013841 #11	ENSMAMG00000013827	ENSMAMG00000013797	ENSMAMG00000013790	ENSMAMG00000013753 #22	ENSMAMG00000013739	ENSMAMG00000013736
Carangaria	ANCESTRAL SPECIES	6	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a.h	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000155997.lb.b	ENSGT00940000157572.a.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00390000013899.b	ENSGT00940000157182.g.a	ENSGT00940000165415.i	ENSGT00940000165829	ENSGT00400000022168.b	ENSGT00980000198638	ENSGT00940000154222.c	ENSGT00970000193565	ENSGT00390000008749.f	ENSGT01030000234613.a.b	ENSGT00940000156879	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000155997.lb.b	ENSGT00940000157572.a.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000177178
Tongue sole	MODERN SPECIES	16	ASB15 (ENSCSEG00000001535)	IQUB (ENSCSEG00000001550)	slc13a1 (ENSCSEG00000001556)	CADPS2 (ENSCSEG00000001570)	ASB15 (ENSCSEG00000001600)	fezf1 (ENSCSEG00000001604)	aass (ENSCSEG00000001607)	PTPRZ1 (ENSCSEG00000001615)	dldh (ENSCSEG00000001634)	SYT8 (ENSCSEG00000001647)	prmt7 (ENSCSEG00000001663)	ciapin1 (ENSCSEG00000001680)	coq9 (ENSCSEG00000001691)	polr2c (ENSCSEG00000001719)	ENSCSEG00000001744 #19	ANKRD27 (ENSCSEG00000001753) #22	TMED6 (ENSCSEG00000001758)	MLKL (ENSCSEG00000001761)	RFWD3 (ENSCSEG00000001774)	GLG1 (ENSCSEG00000001778)	ENSCSEG00000001794	ENSCSEG00000001817	ENSCSEG00000001823	ENSCSEG00000001832	scamp2 (ENSCSEG00000001867)	mpi (ENSCSEG00000001876)	plex9.2 (ENSCSEG00000001884)	myo9ab (ENSCSEG00000001887)	psma4 (ENSCSEG00000001918)	OAZ2 (ENSCSEG00000001923)	ppib (ENSCSEG00000001927)
Turbot	MODERN SPECIES	1	ENSSMAG00000036791	ENSSMAG00000023873	smpd3 (ENSSMAG00000002332)	ENSSMAG00000002348	septin15 (ENSSMAG00000002389)	ENSSMAG00000002399	ENSSMAG00000002414	exoc3l1 (ENSSMAG00000002548)	prmt7 (ENSSMAG00000002669)	ENSSMAG00000037830	CIAPIN1 (ENSSMAG00000002750)	coq9 (ENSSMAG00000002777)	ENSSMAG00000002792	polr2c (ENSSMAG00000002827)	ENSSMAG00000002870 #19	ENSSMAG00000002972 #22	ENSSMAG00000003139	ENSSMAG00000003152	ENSSMAG00000003157	MLKL (ENSSMAG00000003174)	ENSSMAG00000003188	GLG1 (ENSSMAG00000003223)	ENSSMAG00000003532	urahb (ENSSMAG00000026967)	ENSSMAG00000003606	ENSSMAG00000003658	ENSSMAG00000003646	ENSSMAG00000022941	ENSSMAG00000003695	ENSSMAG00000003708	ENSSMAG00000035143
Carangaria_A	ANCESTRAL SPECIES		ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a.h	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000155997.lb.b	ENSGT00940000157572.a.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
Barramundi perch	MODERN SPECIES	471							amfra (ENSLCAG00010016990)	pdcd2l (ENSLCAG00010017016)	ENSLCAG00010017025	DUS2 (ENSLCAG00010017104)	SLC7A10 (ENSLCAG00010017224) #11	faap24 (ENSLCAG00010017228) #16	ENSLCAG00010017229	ENSLCAG00010017230	ENSLCAG00010017235 #19	ENSLCAG00010017245 #22	ENSLCAG00010017249	ZDHHC7 (ENSLCAG00010017253)	TMED6 (ENSLCAG00010017256)	ENSLCAG00010017259	MLKL (ENSLCAG00010017262)	ENSLCAG00010017266	RFWD3 (ENSLCAG00010017270)	GLG1 (ENSLCAG00010017279)	ENSLCAG00010017478	urahb (ENSLCAG00010017482)	ENSLCAG00010017484
Seriola	ANCESTRAL SPECIES	60	ENSGT01020000230364.a.a.b.a.y.b	ENSGT01020000230364.a.a.b.b	ENSGT01020000230364.a.b	ENSGT00730000110895.b.a.o.a	ENSGT00940000156567.a.b	ENSGT00940000157073.a.b	ENSGT00940000157073.a.a	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a	ENSGT00590000083094.a.b	ENSGT00940000159477	ENSGT00390000013249	ENSGT00940000155529.A	ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.b.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.b.a.b	ENSGT00940000157021 #22	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000155997.lb.b	ENSGT00940000157572.a.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812	ENSGT00940000153901.a.b.b
Yellowtail amberjack	MODERN SPECIES	3127															ENSSLDG00000024835	ENSSLDG00000024825 #22
Greater amberjack	MODERN SPECIES	160	lmod2a (ENSSDUG00000015562)	ASB15 (ENSSDUG00000015571)	ASB15 (ENSSDUG00000015587)	IQUB (ENSSDUG00000015614)	slc13a1 (ENSSDUG00000015639)	CADPS2 (ENSSDUG00000015715)	fezf1 (ENSSDUG00000015875)	aass (ENSSDUG00000015904)	ENSSDUG00000016006	ENSSDUG00000016345	ENSSDUG00000016432	ENSSDUG00000016445	ENSSDUG00000016458	ENSSDUG00000016467	ENSSDUG00000016481	ANKRD27 (ENSSDUG00000016497) #22	TMED6 (ENSSDUG00000016543)	TMED6 (ENSSDUG00000016560)	MLKL (ENSSDUG00000016569)	RFWD3 (ENSSDUG00000016584)	GLG1 (ENSSDUG00000016609)	ENSSDUG00000016686	urahb (ENSSDUG00000016691)	ENSSDUG00000016707	CACNA2D4 (ENSSDUG00000016797)	ENSSDUG00000016853	zgc:172145 (ENSSDUG00000016873)	myod1 (ENSSDUG00000016886)	tnnt3a (ENSSDUG00000016913)	ENSSDUG00000016941	ENSSDUG00000016965
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
Tetraodontidae	ANCESTRAL SPECIES	32	ENSGT00390000018285	ENSGT01100000263518.B.b.b.a	ENSGT01020000230364.a.a.b.a.y.b	ENSGT01020000230364.a.a.b.b	ENSGT01020000230364.a.b	ENSGT00730000110895.b.a.o.a	ENSGT00940000157073.a.a	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a	ENSGT00590000083094.a.b	ENSGT00940000159477	ENSGT00390000013249	ENSGT00940000155529.A	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00390000010961.d	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000155997.lb.b	ENSGT00940000157572.a.b	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812	ENSGT01030000234588.b.b.b.b.a.b.a.c.b	ENSGT01030000234588.b.b.b.b.a.b.a.c.a.b.a.a	ENSGT01030000234588.b.b.b.b.a.b.a.c.a.b.a.b
Fugu	MODERN SPECIES	21	SPAM1 (ENSTRUG00000022500)	HYAL4 (ENSTRUG00000016276)	hyal6 (ENSTRUG00000016294)	wasla (ENSTRUG00000016308)	ENSTRUG00000028728	ASB15 (ENSTRUG00000016327)	IQUB (ENSTRUG00000016344)	slc13a1 (ENSTRUG00000016353)	ENSTRUG00000033347	CADPS2 (ENSTRUG00000016391)	fezf1 (ENSTRUG00000016410)	aass (ENSTRUG00000016419)	ENSTRUG00000030993	ENSTRUG00000029018	ENSTRUG00000021888 #19	ANKRD27 (ENSTRUG00000016516) #22	TMED6 (ENSTRUG00000016539)	RFWD3 (ENSTRUG00000016541)	GLG1 (ENSTRUG00000016546)	ENSTRUG00000030677	urahb (ENSTRUG00000021342)	ENSTRUG00000016565	LRTM2 (ENSTRUG00000029534)	myod1 (ENSTRUG00000016609)	tnnt3a (ENSTRUG00000016614)	ENSTRUG00000030147	ENSTRUG00000027670	ENSTRUG00000027588	ENSTRUG00000033030	ENSTRUG00000016632	tnni2a.2 (ENSTRUG00000016644)
Tetraodon	MODERN SPECIES	4	grm8b (ENSTNIG00000010405)	pot1 (ENSTNIG00000010406)	GPR37 (ENSTNIG00000010407)	HYAL4 (ENSTNIG00000000981)	hyal6 (ENSTNIG00000010408)	wasla (ENSTNIG00000010409)	ASB15 (ENSTNIG00000010410)	IQUB (ENSTNIG00000010411)	slc13a1 (ENSTNIG00000010412)	CADPS2 (ENSTNIG00000010413)	fezf1 (ENSTNIG00000010414)	aass (ENSTNIG00000010415)	ENSTNIG00000010416	faap24 (ENSTNIG00000000540) #16	ENSTNIG00000000465 #19	ANKRD27 (ENSTNIG00000010417) #22	TMED6 (ENSTNIG00000010418)	MLKL (ENSTNIG00000010419)	RFWD3 (ENSTNIG00000010420)	ENSTNIG00000010421	ENSTNIG00000018798	ENSTNIG00000000428	ENSTNIG00000004682	CACNA2D4 (ENSTNIG00000004494)	LRTM2 (ENSTNIG00000004493)	SLC7A10 (ENSTNIG00000004495) #11	dldh (ENSTNIG00000004496)	ENSTNIG00000004497	ENSTNIG00000002815	tnni2a.1 (ENSTNIG00000002814)	tnni2a.2 (ENSTNIG00000002813)
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.a.a	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
Ballan wrasse	MODERN SPECIES	74	ENSLBEG00000006600	CIAO2A (ENSLBEG00000006577)	spg11 (ENSLBEG00000006322)	ENSLBEG00000006228	znf277 (ENSLBEG00000006212)	LRRN3 (ENSLBEG00000006195)	immp2l (ENSLBEG00000006159)	amfra (ENSLBEG00000006118)	pdcd2l (ENSLBEG00000006102)	ENSLBEG00000005904	DUS2 (ENSLBEG00000005839)	SLC7A10 (ENSLBEG00000005766) #11	ENSLBEG00000005727	faap24 (ENSLBEG00000005670) #16	ENSLBEG00000005601 #19	ANKRD27 (ENSLBEG00000005433) #22	ZDHHC7 (ENSLBEG00000005385)	TMED6 (ENSLBEG00000005338)	MLKL (ENSLBEG00000005305)	RFWD3 (ENSLBEG00000005275)	GLG1 (ENSLBEG00000005124)	ENSLBEG00000005041	urahb (ENSLBEG00000005026)	ENSLBEG00000004986	ENSLBEG00000004962	LRTM2 (ENSLBEG00000004951)	CACNA2D4 (ENSLBEG00000004912)	zgc:172145 (ENSLBEG00000004893)	myod1 (ENSLBEG00000004859)	tnnt3a (ENSLBEG00000004820)	ENSLBEG00000004792
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.a.a.c.a	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00940000164174	ENSGT00940000160513.b	ENSGT00550000075044	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.a.a.c.a	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00390000017697.a	ENSGT00390000016791	ENSGT00940000154617.B.d	ENSGT00940000167703	ENSGT00390000010852	ENSGT00550000075044	ENSGT00940000160513.b	ENSGT00940000156482.c	ENSGT00940000158339	ENSGT00940000156131.a.a	ENSGT00550000075019	ENSGT00940000156469.a #11	ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.a.a.c.a	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000167812
European seabass	MODERN SPECIES	19	ENSDLAG00005017462	GLG1 (ENSDLAG00005015126)	ENSDLAG00005015034	MLKL (ENSDLAG00005015000)	ENSDLAG00005012594	ENSDLAG00005014966	ENSDLAG00005014959	ENSDLAG00005032517	ENSDLAG00005029364	ENSDLAG00005030973 #16	ENSDLAG00005029245	ENSDLAG00005031298 #16	ENSDLAG00005034069	ENSDLAG00005031331 #16	ENSDLAG00005014845 #19	ENSDLAG00005014832 #22	ENSDLAG00005003990	ENSDLAG00005033067	ENSDLAG00005015168	ENSDLAG00005032221	ENSDLAG00005011560	ENSDLAG00005030487	ENSDLAG00005015099	ENSDLAG00005014818	ENSDLAG00005033658	faap24 (ENSDLAG00005029834) #16	ENSDLAG00005030423	ENSDLAG00005014643 #11	ENSDLAG00005014543	ENSDLAG00005014410	ENSDLAG00005032643
Large yellow croaker	MODERN SPECIES	492	ENSLCRG00005012643	rspry1 (ENSLCRG00005012668)	arl2bp (ENSLCRG00005012762)	PLLP (ENSLCRG00005012764)	plcg2 (ENSLCRG00005012801)	meak7 (ENSLCRG00005012821)	immp2l (ENSLCRG00005012833)	LRRN3 (ENSLCRG00005012835)	amfra (ENSLCRG00005012846)	pdcd2l (ENSLCRG00005012867)	ENSLCRG00005012871	DUS2 (ENSLCRG00005012898)	SLC7A10 (ENSLCRG00005012998) #11	faap24 (ENSLCRG00005013038) #16	ENSLCRG00005013057 #19	ANKRD27 (ENSLCRG00005013092) #22	ZDHHC7 (ENSLCRG00005013142)	TMED6 (ENSLCRG00005013149)	ENSLCRG00005013151	zpd (ENSLCRG00005013159)	MMP15 (ENSLCRG00005013163)	ENSLCRG00005013186	ENSLCRG00005013239	ELMO3 (ENSLCRG00005013526)	e2f4 (ENSLCRG00005016173)	zgc:154077 (ENSLCRG00005016180)	zgc:77158 (ENSLCRG00005016203)	FGF6 (ENSLCRG00005016207)	ENSLCRG00005016215	tigara (ENSLCRG00005016217)	ccnd2a (ENSLCRG00005016231)
Gilthead seabream	MODERN SPECIES	22	LRRN3 (ENSSAUG00010003395)	immp2l (ENSSAUG00010003397)	ENSSAUG00010003398	ENSSAUG00010003408	DUS2 (ENSSAUG00010003452)	SLC7A10 (ENSSAUG00010004047) #11	ENSSAUG00010004191	ENSSAUG00010004199	ENSSAUG00010004214	faap24 (ENSSAUG00010004225) #16	ENSSAUG00010004089	faap24 (ENSSAUG00010004162) #16	ENSSAUG00010004166	faap24 (ENSSAUG00010004177) #16	ENSSAUG00010004206 #19	ANKRD27 (ENSSAUG00010004261) #22	ZDHHC7 (ENSSAUG00010004293)	ENSSAUG00010004298	ENSSAUG00010004300	TMED6 (ENSSAUG00010004301)	ENSSAUG00010004305	MLKL (ENSSAUG00010004319)	RFWD3 (ENSSAUG00010004383)	GLG1 (ENSSAUG00010004416)	ENSSAUG00010004558	ENSSAUG00010004562	ENSSAUG00010004565	ENSSAUG00010004567	ENSSAUG00010004572	ENSSAUG00010004574	urahb (ENSSAUG00010004577)
Perciformes	ANCESTRAL SPECIES	7	ENSGT01020000230364.a.a.b.b	ENSGT01020000230364.a.b	ENSGT00730000110895.b.a.o.a	ENSGT00940000156567.a.b	ENSGT00940000157073.a.b	ENSGT00940000157073.a.a	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a	ENSGT00590000083094.a.b	ENSGT00940000159477	ENSGT00390000013249	ENSGT00940000155529.A	ENSGT01040000240400.c.a.b.a.b.a.a.a.a.b.a.a.c.a	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b
Cottioidei	ANCESTRAL SPECIES	37																ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000157572.a.b	ENSGT00940000155997.lb.b	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b	ENSGT00940000167812
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	14	hyal6 (ENSGACG00000008707)	lmod2a (ENSGACG00000008702)	ENSGACG00000008687	IQUB (ENSGACG00000008678)	CADPS2 (ENSGACG00000008655)	fezf1 (ENSGACG00000008652)	aass (ENSGACG00000008638)	PTPRZ1 (ENSGACG00000008617)	ENSGACG00000008612	ENSGACG00000008606	faap24 (ENSGACG00000008599) #16	ENSGACG00000008594	faap24 (ENSGACG00000008589) #16	ENSGACG00000008587	ENSGACG00000008577 #22	ENSGACG00000008572 #22	ZDHHC7 (ENSGACG00000008550)	ENSGACG00000008543	MLKL (ENSGACG00000008536)	RFWD3 (ENSGACG00000008531)	GLG1 (ENSGACG00000008520)	ENSGACG00000008512	urahb (ENSGACG00000008507)	ENSGACG00000008494	ENSGACG00000008489	CACNA2D4 (ENSGACG00000008453)	ENSGACG00000008450	myod1 (ENSGACG00000008444)	tnnt3a (ENSGACG00000008384)	LSP1 (ENSGACG00000008376)	TNNI2 (ENSGACG00000008349)
Stickleback	MODERN SPECIES	14	HYAL4 (ENSGACG00000008727)	hyal6 (ENSGACG00000008707)	lmod2a (ENSGACG00000008702)	ENSGACG00000008687	IQUB (ENSGACG00000008678)	CADPS2 (ENSGACG00000008655)	fezf1 (ENSGACG00000008652)	aass (ENSGACG00000008638)	PTPRZ1 (ENSGACG00000008617)	ENSGACG00000008612	ENSGACG00000008606	faap24 (ENSGACG00000008599) #16	ENSGACG00000008594	faap24 (ENSGACG00000008589) #16	ENSGACG00000008587	ENSGACG00000008577 #22	ENSGACG00000008572 #22	ZDHHC7 (ENSGACG00000008550)	ENSGACG00000008543	MLKL (ENSGACG00000008536)	RFWD3 (ENSGACG00000008531)	GLG1 (ENSGACG00000008520)	ENSGACG00000008512	urahb (ENSGACG00000008507)	ENSGACG00000008494	ENSGACG00000008489	CACNA2D4 (ENSGACG00000008453)	ENSGACG00000008450	myod1 (ENSGACG00000008444)	tnnt3a (ENSGACG00000008384)	LSP1 (ENSGACG00000008376)
Perciformes_a	ANCESTRAL SPECIES	33	ENSGT01020000230364.a.a.b.a.y.b	ENSGT01020000230364.a.a.b.b	ENSGT01020000230364.a.b	ENSGT00730000110895.b.a.o.a	ENSGT00940000156567.a.b	ENSGT00940000157073.a.b	ENSGT00940000157073.a.a	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a	ENSGT00590000083094.a.b	ENSGT00940000159477	ENSGT00390000013249	ENSGT00940000155529.A	ENSGT00390000009456 #16	ENSGT00420000029847 #19	ENSGT00940000157021 #22	ENSGT00940000156519.p	ENSGT00390000010961.d	ENSGT00390000010961.c	ENSGT00390000016453	ENSGT00390000008931	ENSGT00390000011262.e.a	ENSGT00940000165218.b	ENSGT00940000153229.A.a.a.a	ENSGT00940000160625.r.a	ENSGT00940000155997.lb.b	ENSGT00940000157572.a.b	ENSGT00920000149457	ENSGT00950000182959.b.b.e.a	ENSGT00940000158477.a.b	ENSGT00940000153901.a.b.b
Channel bull blenny	MODERN SPECIES	20	ASB15 (ENSCGOG00000016971)	ENSCGOG00000016978	lmod2a (ENSCGOG00000016981)	ASB15 (ENSCGOG00000016996)	ASB15 (ENSCGOG00000016999)	IQUB (ENSCGOG00000017004)	CADPS2 (ENSCGOG00000017076)	fezf1 (ENSCGOG00000003856)	aass (ENSCGOG00000003916)	PTPRZ1 (ENSCGOG00000004504)	faap24 (ENSCGOG00000005426) #16	ENSCGOG00000005434	ENSCGOG00000005489	ENSCGOG00000005491	ENSCGOG00000005494 #19	ANKRD27 (ENSCGOG00000005534) #22	ENSCGOG00000005970	ENSCGOG00000005975	TMED6 (ENSCGOG00000005977)	ENSCGOG00000005979	faap24 (ENSCGOG00000005980) #16	ENSCGOG00000005983	MLKL (ENSCGOG00000005984)	RFWD3 (ENSCGOG00000005985)	GLG1 (ENSCGOG00000005997)	ENSCGOG00000006597	ENSCGOG00000006612	urahb (ENSCGOG00000006621)	ENSCGOG00000006641	CACNA2D4 (ENSCGOG00000007039)	LRTM2 (ENSCGOG00000007053)
Pike perch	MODERN SPECIES	51	ENSSLUG00000012707	ENSSLUG00000012711	ENSSLUG00000012719	ENSSLUG00000012721	GLG1 (ENSSLUG00000012798)	RFWD3 (ENSSLUG00000015061)	MLKL (ENSSLUG00000015072)	ENSSLUG00000015091	TMED6 (ENSSLUG00000015096)	TMED6 (ENSSLUG00000015100)	ENSSLUG00000015105	ENSSLUG00000015110	ENSSLUG00000015114	faap24 (ENSSLUG00000015118) #16	ENSSLUG00000015125 #19	ANKRD27 (ENSSLUG00000015142) #22	ZDHHC7 (ENSSLUG00000015156)	ENSSLUG00000015160	ENSSLUG00000015165	ENSSLUG00000015167	ENSSLUG00000015170	PTPRZ1 (ENSSLUG00000015487)	aass (ENSSLUG00000019916)	ENSSLUG00000021159	fezf1 (ENSSLUG00000021164)	CADPS2 (ENSSLUG00000021359)	slc13a1 (ENSSLUG00000024331)	IQUB (ENSSLUG00000024356)	ASB15 (ENSSLUG00000024364)	ASB15 (ENSSLUG00000024375)	lmod2a (ENSSLUG00000024384)
Pinecone sodierfish	MODERN SPECIES	20	ENSMMDG00005010027	ENSMMDG00005010029	ciao2a (ENSMMDG00005010030)	spg11 (ENSMMDG00005010037)	ENSMMDG00005010169	znf277 (ENSMMDG00005010192)	ENSMMDG00005011220	immp2l (ENSMMDG00005011223)	LRRN3 (ENSMMDG00005011227)	pdcd2l (ENSMMDG00005011228)	ENSMMDG00005011240	DUS2 (ENSMMDG00005011844)	SLC7A10 (ENSMMDG00005011892) #11	faap24 (ENSMMDG00005011915) #16	ENSMMDG00005011916 #19	ANKRD27 (ENSMMDG00005011925) #22	ZDHHC7 (ENSMMDG00005011932)	TMED6 (ENSMMDG00005011938)	TMED6 (ENSMMDG00005011939)	MLKL (ENSMMDG00005011940)	RFWD3 (ENSMMDG00005011945)	GLG1 (ENSMMDG00005011977)	ENSMMDG00005013389	GPR37 (ENSMMDG00005013392)	SPAM1 (ENSMMDG00005013394)	HYAL4 (ENSMMDG00005013401)	hyal6 (ENSMMDG00005013542)	wasla (ENSMMDG00005013544)	ENSMMDG00005013546	lmod2a (ENSMMDG00005013547)	ASB15 (ENSMMDG00005004070)
Cod	MODERN SPECIES	22	ENSGMOG00000005921	ENSGMOG00000005878	ENSGMOG00000033049	ENSGMOG00000005868	ENSGMOG00000002359	mlycd (ENSGMOG00000006547)	ENSGMOG00000002091	ENSGMOG00000020167	ENSGMOG00000002175	kcng4a (ENSGMOG00000029009)	ENSGMOG00000035203	wfdc1 (ENSGMOG00000003184)	ENSGMOG00000011446	ENSGMOG00000023705	ENSGMOG00000001828	ENSGMOG00000026172 #22	ENSGMOG00000013634	ENSGMOG00000028529	MLKL (ENSGMOG00000013621)	ENSGMOG00000013609	GLG1 (ENSGMOG00000013582)	ENSGMOG00000007240	ENSGMOG00000016555	ENSGMOG00000026619	ENSGMOG00000016032	ENSGMOG00000022184	ENSGMOG00000018154	ENSGMOG00000018064	ENSGMOG00000036034	ENSGMOG00000036393	ENSGMOG00000018013
Spotted gar	MODERN SPECIES	662	cebpg (ENSLOCG00000017587)	cebpa (ENSLOCG00000017586) #10	slc7a10a (ENSLOCG00000001884) #11	ENSLOCG00000001876	ENSLOCG00000001859 #12	ENSLOCG00000001845 #13	gpatch1 (ENSLOCG00000001800) #14	rhpn2 (ENSLOCG00000001772) #15	faap24 (ENSLOCG00000001761) #16	zgc:165481 (ENSLOCG00000017585)	CEP89 (ENSLOCG00000001728) #17	SLC7A9 (ENSLOCG00000001714) #18	nudt19 (ENSLOCG00000001704) #20	ENSLOCG00000001690 #19	RGS9BP (ENSLOCG00000017584) #21	ANKRD27 (ENSLOCG00000001654) #22	pdcd5 (ENSLOCG00000001645) #23	urahb (ENSLOCG00000001632)	ENSLOCG00000001590	CLEC18A (ENSLOCG00000001579)	ENSLOCG00000001568	PDPR (ENSLOCG00000001551)	glg1b (ENSLOCG00000001506)	RFWD3 (ENSLOCG00000001489)	MLKL (ENSLOCG00000001469)	CFAP20 (ENSLOCG00000001458)	WDR59 (ENSLOCG00000001430)	NOB1 (ENSLOCG00000001411)	cog8 (ENSLOCG00000001398)	nip7 (ENSLOCG00000001379)	TMED6 (ENSLOCG00000001361)
Reedfish	MODERN SPECIES	105																ANKRD27 (ENSECRG00000021992) #22	pdcd5 (ENSECRG00000021981) #23	uraha (ENSECRG00000021956)
Elephant shark	MODERN SPECIES	1497	banp (ENSCMIG00000015369)	ca5a (ENSCMIG00000015373)	SLC7A5 (ENSCMIG00000015409)	klhdc4 (ENSCMIG00000015512)	jph3b (ENSCMIG00000015528)	zgc:77439 (ENSCMIG00000015532)	ZCCHC14 (ENSCMIG00000015539)	ap1g1 (ENSCMIG00000015552)	PHLPP2 (ENSCMIG00000015583)	ENSCMIG00000015604	CEP89 (ENSCMIG00000015608) #17	zgc:165481 (ENSCMIG00000015609)	SLC7A9 (ENSCMIG00000015630) #18	ENSCMIG00000015653 #19	RGS9BP (ENSCMIG00000015662) #21	ANKRD27 (ENSCMIG00000015690) #22	pdcd5 (ENSCMIG00000015698) #23	ENSCMIG00000015701	DPY19L3 (ENSCMIG00000015719) #24	ENSCMIG00000015753	ZNF507 (ENSCMIG00000015758) #25	tshz3b (ENSCMIG00000015760) #26	ENSCMIG00000015763	ZNF536 (ENSCMIG00000015764) #27	uri1 (ENSCMIG00000015767) #28	ccne1 (ENSCMIG00000015774) #29	zgc:162297 (ENSCMIG00000015778)	ENSCMIG00000015779	C19orf12 (ENSCMIG00000015781) #30	ENSCMIG00000015782 #30	PLEKHF1 (ENSCMIG00000015784) #31
Cyclostomata	ANCESTRAL SPECIES	835															ENSGT00940000153725.a.b.a #21	ENSGT00940000157021 #22
Hagfish	MODERN SPECIES	844						ENSEBUG00000015788	ENSEBUG00000002627	ENSEBUG00000016619	ENSEBUG00000005309 #20	ENSEBUG00000002348	ENSEBUG00000004589	ENSEBUG00000016822	ENSEBUG00000016142	ENSEBUG00000007613	RGS9BP (ENSEBUG00000000425) #21	ENSEBUG00000014692 #22	ENSEBUG00000000656	ENSEBUG00000014790	ENSEBUG00000004699	ENSEBUG00000002965	slc25a20 (ENSEBUG00000003114)	ENSEBUG00000002765	ENSEBUG00000011688	ENSEBUG00000016159	ENSEBUG00000016946	ENSEBUG00000002515	ENSEBUG00000003729	ENSEBUG00000002428	ENSEBUG00000012013	ENSEBUG00000005967	ENSEBUG00000000546