Amniota	ANCESTRAL SPECIES	84				ENSGT00940000165567	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158980 #35	ENSGT00390000014827 #33
Mammalia	ANCESTRAL SPECIES	58	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000165567	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00940000158980 #35	ENSGT00490000043453 #34	ENSGT00410000026943
Theria	ANCESTRAL SPECIES	32	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943	ENSGT00390000011553 #37
Eutheria	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Glires	ANCESTRAL SPECIES	3	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Rodentia	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00910000148083 #31	ENSGT00390000014827 #33	ENSGT00490000043453 #34
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Naked mole-rat female	MODERN SPECIES	12	TNFSF12 (ENSHGLG00000010122) #7	TNFSF13 (ENSHGLG00000010768) #8	ENSHGLG00000033365 #9	ENSHGLG00000047031 #10	ENSHGLG00000047752 #11	ENSHGLG00000047155 #12	FXR2 (ENSHGLG00000012247) #13	ENSHGLG00000042748 #14	ENSHGLG00000011044 #15	Tp53 (ENSHGLG00000038082) #16	WRAP53 (ENSHGLG00000014000) #17	ENSHGLG00000038949 #18	TMEM88 (ENSHGLG00000034924) #19	NAA38 (ENSHGLG00000033435) #20	CYB5D1 (ENSHGLG00000010161) #21	CHD3 (ENSHGLG00000012017) #22	RNF227 (ENSHGLG00000045551) #23	KCNAB3 (ENSHGLG00000016886) #24	TRAPPC1 (ENSHGLG00000035580) #25	CNTROB (ENSHGLG00000016550) #26	ENSHGLG00000049475 #27	ALOX12B (ENSHGLG00000019071) #28	ALOXE3 (ENSHGLG00000011148) #29	HES7 (ENSHGLG00000012300) #30	ENSHGLG00000033044 #31	VAMP2 (ENSHGLG00000016457) #32	TMEM107 (ENSHGLG00000033965) #33	BORCS6 (ENSHGLG00000013633) #34	ENSHGLG00000047858 #35	ENSHGLG00000035239 #36	CTC1 (ENSHGLG00000015968) #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Hystricomorpha_b	ANCESTRAL SPECIES	22	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Long-tailed chinchilla	MODERN SPECIES	174	CD68 (ENSCLAG00000011317)	MPDU1 (ENSCLAG00000009603) #12	SOX15 (ENSCLAG00000007796) #11	FXR2 (ENSCLAG00000007322) #13	SAT2 (ENSCLAG00000006730) #14	ENSCLAG00000016382	ATP1B2 (ENSCLAG00000015532) #15	TP53 (ENSCLAG00000007189) #16	ENSCLAG00000008651 #17	EFNB3 (ENSCLAG00000008030)	DNAH2 (ENSCLAG00000008437)	KDM6B (ENSCLAG00000006879) #18	TMEM88 (ENSCLAG00000006940) #19	NAA38 (ENSCLAG00000015879) #20	CYB5D1 (ENSCLAG00000016495) #21	CHD3 (ENSCLAG00000010523) #22	RNF227 (ENSCLAG00000008516) #23	KCNAB3 (ENSCLAG00000007675) #24	TRAPPC1 (ENSCLAG00000006633) #25	CNTROB (ENSCLAG00000008419) #26	GUCY2D (ENSCLAG00000011233)	ALOX15B (ENSCLAG00000011947)	ALOX12B (ENSCLAG00000011753) #28	ALOXE3 (ENSCLAG00000013157) #29	HES7 (ENSCLAG00000007782) #30	PER1 (ENSCLAG00000012391)	VAMP2 (ENSCLAG00000012796) #32	TMEM107 (ENSCLAG00000011319) #33	AURKB (ENSCLAG00000015101) #35	CTC1 (ENSCLAG00000014305) #37	PFAS (ENSCLAG00000015433)
Degu	MODERN SPECIES	139	CD68 (ENSODEG00000017563)	MPDU1 (ENSODEG00000017856) #12	SOX15 (ENSODEG00000017501) #11	FXR2 (ENSODEG00000017803) #13	ENSODEG00000017643 #14	SHBG (ENSODEG00000017630)	ATP1B2 (ENSODEG00000017782) #15	TP53 (ENSODEG00000017683) #16	WRAP53 (ENSODEG00000017648) #17	EFNB3 (ENSODEG00000017671)	DNAH2 (ENSODEG00000017776)	KDM6B (ENSODEG00000017794) #18	TMEM88 (ENSODEG00000017852) #19	NAA38 (ENSODEG00000017702) #20	CYB5D1 (ENSODEG00000017742) #21	CHD3 (ENSODEG00000017785) #22	RNF227 (ENSODEG00000017826) #23	KCNAB3 (ENSODEG00000017706) #24	TRAPPC1 (ENSODEG00000017738) #25	CNTROB (ENSODEG00000017795) #26	GUCY2D (ENSODEG00000017784)	ALOX15B (ENSODEG00000017756)	ALOX12B (ENSODEG00000017896) #28	ALOXE3 (ENSODEG00000017730) #29	HES7 (ENSODEG00000017793) #30	ENSODEG00000017780	ENSODEG00000017868	ENSODEG00000017774	VAMP2 (ENSODEG00000017918) #32	TMEM107 (ENSODEG00000017819) #33	AURKB (ENSODEG00000017887) #35
Guinea pig	MODERN SPECIES	61	CD68 (ENSCPOG00000004905)	SOX15 (ENSCPOG00000004915) #11	MPDU1 (ENSCPOG00000032454) #12	FXR2 (ENSCPOG00000023303) #13	SAT2 (ENSCPOG00000031404) #14	SHBG (ENSCPOG00000011310)	ATP1B2 (ENSCPOG00000034285) #15	TP53 (ENSCPOG00000014252) #16	WRAP53 (ENSCPOG00000002599) #17	EFNB3 (ENSCPOG00000022473)	DNAH2 (ENSCPOG00000004386)	KDM6B (ENSCPOG00000004414) #18	TMEM88 (ENSCPOG00000033148) #19	NAA38 (ENSCPOG00000032412) #20	CYB5D1 (ENSCPOG00000004427) #21	CHD3 (ENSCPOG00000022653) #22	RNF227 (ENSCPOG00000027016) #23	KCNAB3 (ENSCPOG00000002028) #24	TRAPPC1 (ENSCPOG00000031689) #25	CNTROB (ENSCPOG00000007169) #26	GUCY2D (ENSCPOG00000001487)	ALOX15B (ENSCPOG00000015598)	ALOX12B (ENSCPOG00000012894) #28	ALOXE3 (ENSCPOG00000012900) #29	HES7 (ENSCPOG00000012913) #30	PER1 (ENSCPOG00000013328)	VAMP2 (ENSCPOG00000039866) #32	TMEM107 (ENSCPOG00000019529) #33	ENSCPOG00000037237	STX8 (ENSCPOG00000002114)	PIK3R5 (ENSCPOG00000010032)
Sciuridae	ANCESTRAL SPECIES	25	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00910000148083 #31	ENSGT00390000014827 #33	ENSGT00490000043453 #34
Marmotini	ANCESTRAL SPECIES	42	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00910000148083 #31	ENSGT00390000014827 #33	ENSGT00490000043453 #34
Alpin marmot	MODERN SPECIES	92	EIF4A1 (ENSMMMG00000019682) ##9	CD68 (ENSMMMG00000019708)	MPDU1 (ENSMMMG00000019711) #12	SOX15 (ENSMMMG00000019717) #11	FXR2 (ENSMMMG00000019720) #13	SAT2 (ENSMMMG00000019728) #14	SHBG (ENSMMMG00000019737)	ATP1B2 (ENSMMMG00000019742) #15	TP53 (ENSMMMG00000019747) #16	WRAP53 (ENSMMMG00000019760) #17	EFNB3 (ENSMMMG00000019770)	KDM6B (ENSMMMG00000019902) #18	TMEM88 (ENSMMMG00000019917) #19	NAA38 (ENSMMMG00000019920) #20	CYB5D1 (ENSMMMG00000019930) #21	CHD3 (ENSMMMG00000019936) #22	KCNAB3 (ENSMMMG00000020007) #24	TRAPPC1 (ENSMMMG00000020030) #25	CNTROB (ENSMMMG00000020034) #26	GUCY2D (ENSMMMG00000020052)	ALOX15B (ENSMMMG00000020089)	ALOX12B (ENSMMMG00000020121) #28	ALOXE3 (ENSMMMG00000020129) #29	PER1 (ENSMMMG00000020158)	VAMP2 (ENSMMMG00000020233) #32	ENSMMMG00000020235 #31	TMEM107 (ENSMMMG00000020245) #33	BORCS6 (ENSMMMG00000020274) #34	AURKB (ENSMMMG00000020278) #35	CTC1 (ENSMMMG00000020294) #37	ENSMMMG00000020312
Marmotini_b	ANCESTRAL SPECIES	35	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Arctic ground squirrel	MODERN SPECIES	77	CD68 (ENSUPAG00010015311)	MPDU1 (ENSUPAG00010015329) #12	SOX15 (ENSUPAG00010015340) #11	FXR2 (ENSUPAG00010015345) #13	SAT2 (ENSUPAG00010015359) #14	SHBG (ENSUPAG00010015369)	ATP1B2 (ENSUPAG00010015380) #15	TP53 (ENSUPAG00010015398) #16	WRAP53 (ENSUPAG00010015444) #17	EFNB3 (ENSUPAG00010015466)	DNAH2 (ENSUPAG00010015485)	KDM6B (ENSUPAG00010015706) #18	TMEM88 (ENSUPAG00010015803) #19	NAA38 (ENSUPAG00010015814) #20	CYB5D1 (ENSUPAG00010015824) #21	CHD3 (ENSUPAG00010015846) #22	KCNAB3 (ENSUPAG00010015981) #24	TRAPPC1 (ENSUPAG00010016002) #25	CNTROB (ENSUPAG00010016016) #26	GUCY2D (ENSUPAG00010016071)	ALOX15B (ENSUPAG00010016133)	ALOX12B (ENSUPAG00010016161) #28	ALOXE3 (ENSUPAG00010016179) #29	HES7 (ENSUPAG00010016200) #30	ENSUPAG00010016214	PER1 (ENSUPAG00010016219)	VAMP2 (ENSUPAG00010016345) #32	TMEM107 (ENSUPAG00010016354) #33	BORCS6 (ENSUPAG00010016378) #34	AURKB (ENSUPAG00010016381) #35	CTC1 (ENSUPAG00010016436) #37
Squirrel	MODERN SPECIES	195	EIF4A1 (ENSSTOG00000024814) ##9	SOX15 (ENSSTOG00000005654) #11	MPDU1 (ENSSTOG00000005636) #12	FXR2 (ENSSTOG00000005657) #13	SAT2 (ENSSTOG00000005681) #14	SHBG (ENSSTOG00000029233)	ATP1B2 (ENSSTOG00000019448) #15	TP53 (ENSSTOG00000022774) #16	WRAP53 (ENSSTOG00000002484) #17	EFNB3 (ENSSTOG00000029036)	DNAH2 (ENSSTOG00000002487)	KDM6B (ENSSTOG00000019400) #18	NAA38 (ENSSTOG00000025950) #20	TMEM88 (ENSSTOG00000001057) #19	CYB5D1 (ENSSTOG00000001060) #21	CHD3 (ENSSTOG00000025907) #22	RNF227 (ENSSTOG00000026440) #23	KCNAB3 (ENSSTOG00000000141) #24	TRAPPC1 (ENSSTOG00000024665) #25	CNTROB (ENSSTOG00000000145) #26	GUCY2D (ENSSTOG00000000149)	ALOX15B (ENSSTOG00000003048)	ALOX12B (ENSSTOG00000026406) #28	ALOXE3 (ENSSTOG00000004789) #29	HES7 (ENSSTOG00000025336) #30	PER1 (ENSSTOG00000005366)	VAMP2 (ENSSTOG00000005379) #32	TMEM107 (ENSSTOG00000020988) #33	BORCS6 (ENSSTOG00000005386) #34	AURKB (ENSSTOG00000005405) #35	CTC1 (ENSSTOG00000005442) #37
Eurasian red squirrel	MODERN SPECIES	12	EIF4A1 (ENSSVLG00005016680) ##9	CD68 (ENSSVLG00005016549)	MPDU1 (ENSSVLG00005016491) #12	SOX15 (ENSSVLG00005016448) #11	FXR2 (ENSSVLG00005016396) #13	SAT2 (ENSSVLG00005016345) #14	SHBG (ENSSVLG00005015979)	ATP1B2 (ENSSVLG00005015878) #15	TP53 (ENSSVLG00005015536) #16	WRAP53 (ENSSVLG00005015335) #17	EFNB3 (ENSSVLG00005015242)	KDM6B (ENSSVLG00005014210) #18	TMEM88 (ENSSVLG00005014138) #19	NAA38 (ENSSVLG00005014059) #20	CYB5D1 (ENSSVLG00005013988) #21	CHD3 (ENSSVLG00005013898) #22	RNF227 (ENSSVLG00005013817) #23	KCNAB3 (ENSSVLG00005013744) #24	TRAPPC1 (ENSSVLG00005013628) #25	CNTROB (ENSSVLG00005013509) #26	ENSSVLG00005013370	ENSSVLG00005013313	ENSSVLG00005013286	ENSSVLG00005013227	ENSSVLG00005013152	GUCY2D (ENSSVLG00005013065)	ALOX15B (ENSSVLG00005012592)	ALOX12B (ENSSVLG00005012389) #28	ALOXE3 (ENSSVLG00005012344) #29	HES7 (ENSSVLG00005012279) #30	PER1 (ENSSVLG00005012222)
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Myomorpha	ANCESTRAL SPECIES		ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Muroidea	ANCESTRAL SPECIES		ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00860000135609	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00860000135609	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34
Chinese hamster chok1gshd	MODERN SPECIES	229	Lec35 (ENSCGRG00001008612) #12	Sox15 (ENSCGRG00001006850) #11	Fxr2 (ENSCGRG00001000488) #13	Sat2 (ENSCGRG00001024470) #14	Shbg (ENSCGRG00001024732)	Atp1b2 (ENSCGRG00001016825) #15	Trp53 (ENSCGRG00001012952) #16	Wrap53 (ENSCGRG00001009844) #17	Efnb3 (ENSCGRG00001004575)	Dnah2 (ENSCGRG00001023725)	Kdm6b (ENSCGRG00001023895) #18	Tmem88 (ENSCGRG00001018524) #19	Naa38 (ENSCGRG00001016403) #20	Cyb5d1 (ENSCGRG00001015505) #21	ENSCGRG00001023929	Chd3 (ENSCGRG00001011306) #22	Rnf227 (ENSCGRG00001005462) #23	Kcnab3 (ENSCGRG00001023295) #24	Trappc1 (ENSCGRG00001022956) #25	Cntrob (ENSCGRG00001023171) #26	Gucy2e (ENSCGRG00001008157)	Alox8 (ENSCGRG00001024747)	Alox12b (ENSCGRG00001024016) #28	Aloxe3 (ENSCGRG00001000524) #29	ENSCGRG00001008882	Hes7 (ENSCGRG00001023628) #30	Per1 (ENSCGRG00001019654)	Vamp2 (ENSCGRG00001023651) #32	Tmem107 (ENSCGRG00001021229) #33	ENSCGRG00001004000	Borcs6 (ENSCGRG00001002574) #34
Golden Hamster	MODERN SPECIES	627	Senp3 (ENSMAUG00000008104)	ENSMAUG00000018508 ##9	ENSMAUG00000019191	Mpdu1 (ENSMAUG00000001160) #12	Fxr2 (ENSMAUG00000002021) #13	Sat2 (ENSMAUG00000021610) #14	Atp1b2 (ENSMAUG00000021762) #15	Tp53 (ENSMAUG00000022241) #16	Wrap53 (ENSMAUG00000008952) #17	Efnb3 (ENSMAUG00000014491)	Dnah2 (ENSMAUG00000010439)	Kdm6b (ENSMAUG00000012974) #18	Tmem88 (ENSMAUG00000019666) #19	Naa38 (ENSMAUG00000020052) #20	Cyb5d1 (ENSMAUG00000020638) #21	Chd3 (ENSMAUG00000013873) #22	Rnf227 (ENSMAUG00000014108) #23	Kcnab3 (ENSMAUG00000015147) #24	Trappc1 (ENSMAUG00000005409) #25	Cntrob (ENSMAUG00000009950) #26	Gucy2e (ENSMAUG00000020496)	Alox8 (ENSMAUG00000007300)	Alox12b (ENSMAUG00000010342) #28	Aloxe3 (ENSMAUG00000009706) #29	Hes7 (ENSMAUG00000012437) #30	Per1 (ENSMAUG00000014411)	Vamp2 (ENSMAUG00000008839) #32	Tmem107 (ENSMAUG00000010829) #33	Borcs6 (ENSMAUG00000010598) #34	Aurkb (ENSMAUG00000019977) #35	Ctc1 (ENSMAUG00000020400) #37
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00860000135609	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Prairie vole	MODERN SPECIES	15	ENSMOCG00000019979 #12	Sox15 (ENSMOCG00000001244) #11	Fxr2 (ENSMOCG00000019049) #13	Sat2 (ENSMOCG00000020053) #14	Shbg (ENSMOCG00000013734)	Atp1b2 (ENSMOCG00000009972) #15	Trp53 (ENSMOCG00000020008) #16	Wrap53 (ENSMOCG00000015971) #17	Efnb3 (ENSMOCG00000006928)	Dnah2 (ENSMOCG00000003037)	Kdm6b (ENSMOCG00000009811) #18	Tmem88 (ENSMOCG00000001201) #19	Naa38 (ENSMOCG00000002129) #20	Cyb5d1 (ENSMOCG00000016201) #21	ENSMOCG00000020842	Chd3 (ENSMOCG00000004848) #22	Rnf227 (ENSMOCG00000013838) #23	Kcnab3 (ENSMOCG00000020356) #24	Trappc1 (ENSMOCG00000006677) #25	Cntrob (ENSMOCG00000010197) #26	Gucy2e (ENSMOCG00000016326)	Alox8 (ENSMOCG00000022125)	Alox12b (ENSMOCG00000010339) #28	Aloxe3 (ENSMOCG00000019904) #29	Hes7 (ENSMOCG00000010346) #30	Per1 (ENSMOCG00000017373)	Vamp2 (ENSMOCG00000019775) #32	Tmem107 (ENSMOCG00000018427) #33	Borcs6 (ENSMOCG00000002909) #34	Aurkb (ENSMOCG00000010954) #35	Ctc1 (ENSMOCG00000021885) #37
Northern American deer mouse	MODERN SPECIES	21	ENSPEMG00000012269	Mpdu1 (ENSPEMG00000019060) #12	Sox15 (ENSPEMG00000019249) #11	Fxr2 (ENSPEMG00000019239) #13	Sat2 (ENSPEMG00000019261) #14	Shbg (ENSPEMG00000008069)	Atp1b2 (ENSPEMG00000009297) #15	ENSPEMG00000011289 #16	Wrap53 (ENSPEMG00000009467) #17	Efnb3 (ENSPEMG00000029907)	Dnah2 (ENSPEMG00000004906)	Kdm6b (ENSPEMG00000010257) #18	Tmem88 (ENSPEMG00000025255) #19	Naa38 (ENSPEMG00000015014) #20	Cyb5d1 (ENSPEMG00000027957) #21	Chd3 (ENSPEMG00000014262) #22	ENSPEMG00000029356	Kcnab3 (ENSPEMG00000012211) #24	Trappc1 (ENSPEMG00000010837) #25	Cntrob (ENSPEMG00000015583) #26	Gucy2e (ENSPEMG00000010662)	Alox8 (ENSPEMG00000014719)	Alox12b (ENSPEMG00000013960) #28	Aloxe3 (ENSPEMG00000001399) #29	ENSPEMG00000024560	Hes7 (ENSPEMG00000026794) #30	ENSPEMG00000030462	ENSPEMG00000018665	Vamp2 (ENSPEMG00000024559) #32	Tmem107 (ENSPEMG00000014180) #33	Borcs6 (ENSPEMG00000007171) #34
Murinae	ANCESTRAL SPECIES	7	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Mus	ANCESTRAL SPECIES	2	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Mouse	MODERN SPECIES	2	Cd68 (ENSMUSG00000018774) #10	Mpdu1 (ENSMUSG00000018761) #12	Sox15 (ENSMUSG00000041287) #11	Fxr2 (ENSMUSG00000018765) #13	Sat2 (ENSMUSG00000069835) #14	Shbg (ENSMUSG00000005202)	Atp1b2 (ENSMUSG00000041329) #15	Trp53 (ENSMUSG00000059552) #16	Wrap53 (ENSMUSG00000041346) #17	Efnb3 (ENSMUSG00000003934)	Dnah2 (ENSMUSG00000005237)	Kdm6b (ENSMUSG00000018476) #18	Tmem88 (ENSMUSG00000045377) #19	Naa38 (ENSMUSG00000059278) #20	Cyb5d1 (ENSMUSG00000044795) #21	Chd3 (ENSMUSG00000018474) #22	Rnf227 (ENSMUSG00000043419) #23	Kcnab3 (ENSMUSG00000018470) #24	Trappc1 (ENSMUSG00000049299) #25	Cntrob (ENSMUSG00000032782) #26	Gucy2e (ENSMUSG00000020890)	Alox8 (ENSMUSG00000020891)	Alox12b (ENSMUSG00000032807) #28	Aloxe3 (ENSMUSG00000020892) #29	Hes7 (ENSMUSG00000023781) #30	Per1 (ENSMUSG00000020893)	Vamp2 (ENSMUSG00000020894) #32	Tmem107 (ENSMUSG00000020895) #33	Borcs6 (ENSMUSG00000045176) #34	Aurkb (ENSMUSG00000020897) #35	Ctc1 (ENSMUSG00000020898) #37
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00860000136019	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
spretus	MODERN SPECIES	2	Sox15 (MGP_SPRETEiJ_G0017415) #11	Fxr2 (MGP_SPRETEiJ_G0017414) #13	Sat2 (MGP_SPRETEiJ_G0017413) #14	Shbg (MGP_SPRETEiJ_G0017412)	Atp1b2 (MGP_SPRETEiJ_G0017411) #15	Trp53 (MGP_SPRETEiJ_G0017410) #16	Wrap53 (MGP_SPRETEiJ_G0017409) #17	Efnb3 (MGP_SPRETEiJ_G0017408)	Dnah2 (MGP_SPRETEiJ_G0017407)	Kdm6b (MGP_SPRETEiJ_G0017406) #18	Tmem88 (MGP_SPRETEiJ_G0017405) #19	Naa38 (MGP_SPRETEiJ_G0017404) #20	MGP_SPRETEiJ_G0017403 #21	MGP_SPRETEiJ_G0017402 #21	MGP_SPRETEiJ_G0017401	Chd3 (MGP_SPRETEiJ_G0017400) #22	Kcnab3 (MGP_SPRETEiJ_G0017399) #24	MGP_SPRETEiJ_G0017398 #25	Cntrob (MGP_SPRETEiJ_G0017397) #26	Gucy2e (MGP_SPRETEiJ_G0017396)	Alox8 (MGP_SPRETEiJ_G0017395)	Alox12b (MGP_SPRETEiJ_G0017394) #28	Aloxe3 (MGP_SPRETEiJ_G0017393) #29	Hes7 (MGP_SPRETEiJ_G0017392) #30	MGP_SPRETEiJ_G0017391	Per1 (MGP_SPRETEiJ_G0017390)	Vamp2 (MGP_SPRETEiJ_G0017389) #32	Tmem107 (MGP_SPRETEiJ_G0017388) #33	Borcs6 (MGP_SPRETEiJ_G0017387) #34	Aurkb (MGP_SPRETEiJ_G0017386) #35	Ctc1 (MGP_SPRETEiJ_G0017385) #37
Steppe mouse	MODERN SPECIES	2607	Cd68 (ENSMSIG00000025801) #10	Mpdu1 (ENSMSIG00000025820) #12	Sox15 (ENSMSIG00000025831) #11	Fxr2 (ENSMSIG00000025838) #13	ENSMSIG00000025872 #14	Shbg (ENSMSIG00000025876)	Atp1b2 (ENSMSIG00000025884) #15	ENSMSIG00000025886 #16	Wrap53 (ENSMSIG00000026006) #17	Efnb3 (ENSMSIG00000026027)	Dnah2 (ENSMSIG00000026044)	Kdm6b (ENSMSIG00000026234) #18	Tmem88 (ENSMSIG00000026250) #19	Naa38 (ENSMSIG00000026252) #20	Cyb5d1 (ENSMSIG00000026258) #21	Chd3 (ENSMSIG00000026278) #22	Rnf227 (ENSMSIG00000026421) #23	Kcnab3 (ENSMSIG00000026433) #24	Trappc1 (ENSMSIG00000026458) #25	Cntrob (ENSMSIG00000026477) #26
Ryukyu mouse	MODERN SPECIES	2	Sox15 (MGP_CAROLIEiJ_G0016579) #11	Fxr2 (MGP_CAROLIEiJ_G0016578) #13	Sat2 (MGP_CAROLIEiJ_G0016577) #14	Shbg (MGP_CAROLIEiJ_G0016576)	Atp1b2 (MGP_CAROLIEiJ_G0016575) #15	Trp53 (MGP_CAROLIEiJ_G0016574) #16	Wrap53 (MGP_CAROLIEiJ_G0016573) #17	Efnb3 (MGP_CAROLIEiJ_G0016572)	Dnah2 (MGP_CAROLIEiJ_G0016571)	Kdm6b (MGP_CAROLIEiJ_G0016570) #18	Tmem88 (MGP_CAROLIEiJ_G0016569) #19	Naa38 (MGP_CAROLIEiJ_G0016568) #20	MGP_CAROLIEiJ_G0016567 #21	MGP_CAROLIEiJ_G0016566 #21	MGP_CAROLIEiJ_G0016565	Chd3 (MGP_CAROLIEiJ_G0016564) #22	Kcnab3 (MGP_CAROLIEiJ_G0016563) #24	MGP_CAROLIEiJ_G0016562 #25	Cntrob (MGP_CAROLIEiJ_G0016561) #26	Gucy2e (MGP_CAROLIEiJ_G0016560)	Alox8 (MGP_CAROLIEiJ_G0016559)	Alox12b (MGP_CAROLIEiJ_G0016558) #28	Aloxe3 (MGP_CAROLIEiJ_G0016557) #29	Hes7 (MGP_CAROLIEiJ_G0016556) #30	MGP_CAROLIEiJ_G0016555	Per1 (MGP_CAROLIEiJ_G0016554)	Vamp2 (MGP_CAROLIEiJ_G0016553) #32	Tmem107 (MGP_CAROLIEiJ_G0016552) #33	Borcs6 (MGP_CAROLIEiJ_G0016551) #34	Aurkb (MGP_CAROLIEiJ_G0016550) #35	Ctc1 (MGP_CAROLIEiJ_G0016549) #37
Shrew mouse	MODERN SPECIES	5	Sox15 (MGP_PahariEiJ_G0017710) #11	Fxr2 (MGP_PahariEiJ_G0017709) #13	Sat2 (MGP_PahariEiJ_G0017708) #14	MGP_PahariEiJ_G0017707	Atp1b2 (MGP_PahariEiJ_G0017706) #15	Trp53 (MGP_PahariEiJ_G0017705) #16	Wrap53 (MGP_PahariEiJ_G0017704) #17	Efnb3 (MGP_PahariEiJ_G0017703)	Dnah2 (MGP_PahariEiJ_G0017702)	Kdm6b (MGP_PahariEiJ_G0017701) #18	Tmem88 (MGP_PahariEiJ_G0017700) #19	Naa38 (MGP_PahariEiJ_G0017699) #20	MGP_PahariEiJ_G0017698 #21	MGP_PahariEiJ_G0017697 #21	MGP_PahariEiJ_G0017696	Chd3 (MGP_PahariEiJ_G0017695) #22	Kcnab3 (MGP_PahariEiJ_G0017694) #24	Trappc1 (MGP_PahariEiJ_G0017693) #25	Cntrob (MGP_PahariEiJ_G0017692) #26	Gucy2e (MGP_PahariEiJ_G0017691)	Alox8 (MGP_PahariEiJ_G0017690)	Alox12b (MGP_PahariEiJ_G0017689) #28	Aloxe3 (MGP_PahariEiJ_G0017688) #29	Hes7 (MGP_PahariEiJ_G0017687) #30	MGP_PahariEiJ_G0017686	Per1 (MGP_PahariEiJ_G0017685)	Vamp2 (MGP_PahariEiJ_G0017684) #32	Tmem107 (MGP_PahariEiJ_G0017683) #33	Borcs6 (MGP_PahariEiJ_G0017682) #34	Aurkb (MGP_PahariEiJ_G0017681) #35	Ctc1 (MGP_PahariEiJ_G0017680) #37
Rat	MODERN SPECIES	1	Cd68 (ENSRNOG00000037563)	Mpdu1 (ENSRNOG00000012162) #12	Sox15 (ENSRNOG00000012155) #11	Fxr2 (ENSRNOG00000011876) #13	Sat2 (ENSRNOG00000011714) #14	Shbg (ENSRNOG00000011357)	Atp1b2 (ENSRNOG00000011227) #15	Tp53 (ENSRNOG00000010756) #16	Wrap53 (ENSRNOG00000010520) #17	Efnb3 (ENSRNOG00000010320)	Dnah2 (ENSRNOG00000052688)	Kdm6b (ENSRNOG00000037613) #18	Tmem88 (ENSRNOG00000009870) #19	Naa38 (ENSRNOG00000009823) #20	Cyb5d1 (ENSRNOG00000066275) #21	Chd3 (ENSRNOG00000009722) #22	Rnf227 (ENSRNOG00000021540) #23	Kcnab3 (ENSRNOG00000008480) #24	Trappc1 (ENSRNOG00000037627) #25	Cntrob (ENSRNOG00000008270) #26	Gucy2d (ENSRNOG00000007931)	Alox15b (ENSRNOG00000007778)	Alox12b (ENSRNOG00000022210) #28	LOC100359495 (ENSRNOG00000064074)	Aloxe3 (ENSRNOG00000007454) #29	Hes7 (ENSRNOG00000007391) #30	Per1 (ENSRNOG00000007387)	Vamp2 (ENSRNOG00000006989) #32	ENSRNOG00000067865	Tmem107 (ENSRNOG00000006519) #33	Borcs6 (ENSRNOG00000006513) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1746	ENSNGAG00000017735	Mpdu1 (ENSNGAG00000002289) #12	Sox15 (ENSNGAG00000001407) #11	Fxr2 (ENSNGAG00000016236) #13	Sat2 (ENSNGAG00000014713) #14	Atp1b2 (ENSNGAG00000011555) #15	Tp53 (ENSNGAG00000010608) #16	Wrap53 (ENSNGAG00000001849) #17	Efnb3 (ENSNGAG00000000608)	Dnah2 (ENSNGAG00000015592)	Kdm6b (ENSNGAG00000002609) #18	Tmem88 (ENSNGAG00000019276) #19	Naa38 (ENSNGAG00000019042) #20	Cyb5d1 (ENSNGAG00000017998) #21	ENSNGAG00000012476	Chd3 (ENSNGAG00000000773) #22	Rnf227 (ENSNGAG00000021827) #23	Kcnab3 (ENSNGAG00000020938) #24	Trappc1 (ENSNGAG00000024337) #25	Cntrob (ENSNGAG00000007283) #26	Gucy2e (ENSNGAG00000022688)	Alox8 (ENSNGAG00000015152)	Alox12b (ENSNGAG00000024363) #28	Aloxe3 (ENSNGAG00000024305) #29	Hes7 (ENSNGAG00000024169) #30	Per1 (ENSNGAG00000023133)	Vamp2 (ENSNGAG00000022346) #32	Tmem107 (ENSNGAG00000021700) #33	Aurkb (ENSNGAG00000009866) #35	Ctc1 (ENSNGAG00000014051) #37	Pfas (ENSNGAG00000012363)
Lesser Egyptian jerboa	MODERN SPECIES	168	ENSJJAG00000022204	Mpdu1 (ENSJJAG00000020318) #12	Sox15 (ENSJJAG00000016980) #11	Fxr2 (ENSJJAG00000016434) #13	Sat2 (ENSJJAG00000015219) #14	Shbg (ENSJJAG00000014834)	Atp1b2 (ENSJJAG00000013283) #15	Trp53 (ENSJJAG00000012331) #16	Wrap53 (ENSJJAG00000011669) #17	Efnb3 (ENSJJAG00000011348)	Dnah2 (ENSJJAG00000019886)	ENSJJAG00000014228 #18	Tmem88 (ENSJJAG00000013316) #19	Naa38 (ENSJJAG00000013236) #20	Cyb5d1 (ENSJJAG00000012580) #21	Chd3 (ENSJJAG00000017633) #22	Kcnab3 (ENSJJAG00000007965) #24	Trappc1 (ENSJJAG00000000666) #25	Cntrob (ENSJJAG00000022253) #26	Gucy2e (ENSJJAG00000019441)	Alox8 (ENSJJAG00000017626)	Alox12b (ENSJJAG00000015753) #28	Aloxe3 (ENSJJAG00000011820) #29	Hes7 (ENSJJAG00000009906) #30	ENSJJAG00000017534	ENSJJAG00000016621	Fbxo25 (ENSJJAG00000014014)	Srfbp1 (ENSJJAG00000013229)	Lox (ENSJJAG00000012805)	1700034E13Rik (ENSJJAG00000012621)	ENSJJAG00000012299
Kangaroo rat	MODERN SPECIES	338	ENSDORG00000014227	Mpdu1 (ENSDORG00000014229) #12	Sox15 (ENSDORG00000014230) #11	Fxr2 (ENSDORG00000014232) #13	Sat2 (ENSDORG00000029725) #14	ENSDORG00000029595	Atp1b2 (ENSDORG00000025939) #15	Trp53 (ENSDORG00000026783) #16	Wrap53 (ENSDORG00000008488) #17	Efnb3 (ENSDORG00000026303)	Dnah2 (ENSDORG00000008370)	Kdm6b (ENSDORG00000010167) #18	Tmem88 (ENSDORG00000025174) #19	Naa38 (ENSDORG00000010169) #20	Cyb5d1 (ENSDORG00000023948) #21	Chd3 (ENSDORG00000010713) #22	Rnf227 (ENSDORG00000010719) #23	Kcnab3 (ENSDORG00000010720) #24	Trappc1 (ENSDORG00000010722) #25	Cntrob (ENSDORG00000010724) #26	Gucy2e (ENSDORG00000001588)	Alox8 (ENSDORG00000014346)	ENSDORG00000027923	Alox12b (ENSDORG00000003862) #28	Aloxe3 (ENSDORG00000003866) #29	Hes7 (ENSDORG00000003869) #30	ENSDORG00000003870	Per1 (ENSDORG00000026078)	Vamp2 (ENSDORG00000003873) #32	Tmem107 (ENSDORG00000015910) #33	ENSDORG00000009465 #34
Lagomorpha	ANCESTRAL SPECIES		ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00940000158980 #35	ENSGT00390000011553 #37	ENSGT00390000007600
Rabbit	MODERN SPECIES	10	CD68 (ENSOCUG00000010383)	SOX15 (ENSOCUG00000001100) #11	MPDU1 (ENSOCUG00000010389) #12	FXR2 (ENSOCUG00000010393) #13	ENSOCUG00000002563 #14	SHBG (ENSOCUG00000002566)	ATP1B2 (ENSOCUG00000002988) #15	TP53 (ENSOCUG00000001138) #16	WRAP53 (ENSOCUG00000025261) #17	EFNB3 (ENSOCUG00000002822)	DNAH2 (ENSOCUG00000012688)	KDM6B (ENSOCUG00000017292) #18	TMEM88 (ENSOCUG00000017280) #19	NAA38 (ENSOCUG00000017284) #20	CYB5D1 (ENSOCUG00000017288) #21	CHD3 (ENSOCUG00000029299) #22	RNF227 (ENSOCUG00000017320) #23	KCNAB3 (ENSOCUG00000017325) #24	TRAPPC1 (ENSOCUG00000017332) #25	CNTROB (ENSOCUG00000017335) #26	GUCY2D (ENSOCUG00000004872)	ALOX15B (ENSOCUG00000010340)	ALOX12B (ENSOCUG00000005959) #28	ALOXE3 (ENSOCUG00000029634) #29	HES7 (ENSOCUG00000002606) #30	PER1 (ENSOCUG00000026333)	ENSOCUG00000010145 #32	TMEM107 (ENSOCUG00000038905) #33	ENSOCUG00000021623	AURKB (ENSOCUG00000011957) #35	CTC1 (ENSOCUG00000010809) #37
Pika	MODERN SPECIES	3276																CHD3 (ENSOPRG00000011069) #22	TRAPPC1 (ENSOPRG00000011136) #25	CNTROB (ENSOPRG00000011148) #26
Tree shrew	MODERN SPECIES	3682																CHD3 (ENSTBEG00000011454) #22	KCNAB3 (ENSTBEG00000013063) #24	TRAPPC1 (ENSTBEG00000013702) #25	CNTROB (ENSTBEG00000013863) #26	GUCY2D (ENSTBEG00000014810)
Primates	ANCESTRAL SPECIES	3	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Haplorrhini	ANCESTRAL SPECIES	29	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Simiiformes	ANCESTRAL SPECIES	23	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34
Catarrhini	ANCESTRAL SPECIES	24	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34
Hominoidea	ANCESTRAL SPECIES	25	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34
Hominidae	ANCESTRAL SPECIES	20	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827.m #33	ENSGT00490000043453 #34	ENSGT00410000026943	ENSGT00940000158980 #35
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827.n #33	ENSGT00410000026943	ENSGT00390000014827.m #33	ENSGT00490000043453 #34
Pan	ANCESTRAL SPECIES	3	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00730000110974	ENSGT00950000183070.a.b.h	ENSGT00940000157416	ENSGT00390000007741.a.k	ENSGT00940000161380	ENSGT01100000263525.b.a	ENSGT00390000006679.b	ENSGT00940000160427	ENSGT00390000005121	ENSGT00390000007843.u.a
Chimpanzee	MODERN SPECIES	8	CD68 (ENSPTRG00000008695)	MPDU1 (ENSPTRG00000008696) #12	SOX15 (ENSPTRG00000008697) #11	FXR2 (ENSPTRG00000008698) #13	SAT2 (ENSPTRG00000008699) #14	SHBG (ENSPTRG00000008700)	ATP1B2 (ENSPTRG00000008701) #15	TP53 (ENSPTRG00000008703) #16	WRAP53 (ENSPTRG00000008705) #17	EFNB3 (ENSPTRG00000046966)	DNAH2 (ENSPTRG00000008709)	KDM6B (ENSPTRG00000008710) #18	TMEM88 (ENSPTRG00000008711) #19	NAA38 (ENSPTRG00000008712) #20	CYB5D1 (ENSPTRG00000008713) #21	CHD3 (ENSPTRG00000008714) #22	RNF227 (ENSPTRG00000043140) #23	KCNAB3 (ENSPTRG00000008716) #24	TRAPPC1 (ENSPTRG00000008717) #25	CNTROB (ENSPTRG00000008719) #26	GUCY2D (ENSPTRG00000008720)	NGFR (ENSPTRG00000009377)	PHB1 (ENSPTRG00000009376)	ENSPTRG00000044551	PHOSPHO1 (ENSPTRG00000009372)	ABI3 (ENSPTRG00000009371)	GNGT2 (ENSPTRG00000009370)	B4GALNT2 (ENSPTRG00000009369)	IGF2BP1 (ENSPTRG00000009368)	GIP (ENSPTRG00000009367)	SNF8 (ENSPTRG00000051067)
Bonobo	MODERN SPECIES	8	CD68 (ENSPPAG00000026476)	MPDU1 (ENSPPAG00000040485) #12	SOX15 (ENSPPAG00000039096) #11	FXR2 (ENSPPAG00000029387) #13	SAT2 (ENSPPAG00000039838) #14	SHBG (ENSPPAG00000040598)	ATP1B2 (ENSPPAG00000035739) #15	TP53 (ENSPPAG00000028702) #16	WRAP53 (ENSPPAG00000041493) #17	EFNB3 (ENSPPAG00000028302)	DNAH2 (ENSPPAG00000038375)	KDM6B (ENSPPAG00000033078) #18	TMEM88 (ENSPPAG00000035566) #19	ENSPPAG00000026097 #20	CYB5D1 (ENSPPAG00000037753) #21	CHD3 (ENSPPAG00000032886) #22	RNF227 (ENSPPAG00000040198) #23	KCNAB3 (ENSPPAG00000018201) #24	TRAPPC1 (ENSPPAG00000029301) #25	CNTROB (ENSPPAG00000035938) #26	GUCY2D (ENSPPAG00000038449)	NGFR (ENSPPAG00000039815)	ENSPPAG00000026668	ZNF652 (ENSPPAG00000024727)	PHOSPHO1 (ENSPPAG00000042612)	ABI3 (ENSPPAG00000025669)	ENSPPAG00000028035	B4GALNT2 (ENSPPAG00000033188)	IGF2BP1 (ENSPPAG00000040224)	ENSPPAG00000029732	SNF8 (ENSPPAG00000030822)
Human	MODERN SPECIES	8	CD68 (ENSG00000129226)	MPDU1 (ENSG00000129255) #12	SOX15 (ENSG00000129194) #11	FXR2 (ENSG00000129245) #13	SHBG (ENSG00000129214)	SAT2 (ENSG00000141504) #14	ATP1B2 (ENSG00000129244) #15	TP53 (ENSG00000141510) #16	WRAP53 (ENSG00000141499) #17	EFNB3 (ENSG00000108947)	DNAH2 (ENSG00000183914)	KDM6B (ENSG00000132510) #18	TMEM88 (ENSG00000167874) #19	NAA38 (ENSG00000183011) #20	CYB5D1 (ENSG00000182224) #21	CHD3 (ENSG00000170004) #22	RNF227 (ENSG00000179859) #23	KCNAB3 (ENSG00000170049) #24	TRAPPC1 (ENSG00000170043) #25	CNTROB (ENSG00000170037) #26	GUCY2D (ENSG00000132518)	ALOX15B (ENSG00000179593)	ALOX12B (ENSG00000179477) #28	ALOXE3 (ENSG00000179148) #29	HES7 (ENSG00000179111) #30	PER1 (ENSG00000179094)	ENSG00000263620	VAMP2 (ENSG00000220205) #32	TMEM107 (ENSG00000179029) #33	BORCS6 (ENSG00000196544) #34	AURKB (ENSG00000178999) #35
Gorilla	MODERN SPECIES	8	CD68 (ENSGGOG00000023269)	MPDU1 (ENSGGOG00000026489) #12	SOX15 (ENSGGOG00000027463) #11	FXR2 (ENSGGOG00000024357) #13	SAT2 (ENSGGOG00000027495) #14	SHBG (ENSGGOG00000025587)	ATP1B2 (ENSGGOG00000002715) #15	TP53 (ENSGGOG00000009786) #16	WRAP53 (ENSGGOG00000005026) #17	EFNB3 (ENSGGOG00000005033)	DNAH2 (ENSGGOG00000001454)	KDM6B (ENSGGOG00000015307) #18	TMEM88 (ENSGGOG00000015315) #19	NAA38 (ENSGGOG00000015317) #20	CYB5D1 (ENSGGOG00000015321) #21	CHD3 (ENSGGOG00000013496) #22	RNF227 (ENSGGOG00000042011) #23	KCNAB3 (ENSGGOG00000006442) #24	TRAPPC1 (ENSGGOG00000006448) #25	CNTROB (ENSGGOG00000006451) #26	GUCY2D (ENSGGOG00000014330)	ALOX15B (ENSGGOG00000014350)	ALOX12B (ENSGGOG00000005736) #28	ALOXE3 (ENSGGOG00000005751) #29	HES7 (ENSGGOG00000005760) #30	PER1 (ENSGGOG00000005764)	VAMP2 (ENSGGOG00000013763) #32	ENSGGOG00000039582 #33	BORCS6 (ENSGGOG00000002865) #34	ENSGGOG00000037358	AURKB (ENSGGOG00000002867) #35
Orangutan	MODERN SPECIES	8	CD68 (ENSPPYG00000007927)	MPDU1 (ENSPPYG00000007928) #12	SOX15 (ENSPPYG00000007929) #11	FXR2 (ENSPPYG00000007930) #13	ENSPPYG00000007931 #14	SHBG (ENSPPYG00000007932)	ATP1B2 (ENSPPYG00000007933) #15	TP53 (ENSPPYG00000007934) #16	ENSPPYG00000031962	WRAP53 (ENSPPYG00000008860) #17	EFNB3 (ENSPPYG00000031420)	DNAH2 (ENSPPYG00000007935)	TMEM88 (ENSPPYG00000007936) #19	ENSPPYG00000007937 #20	CYB5D1 (ENSPPYG00000007938) #21	CHD3 (ENSPPYG00000007940) #22	RNF227 (ENSPPYG00000041261) #23	KCNAB3 (ENSPPYG00000007942) #24	TRAPPC1 (ENSPPYG00000007943) #25	CNTROB (ENSPPYG00000007944) #26	GUCY2D (ENSPPYG00000007945)	ALOX15B (ENSPPYG00000007946)	ALOX12B (ENSPPYG00000037794) #28	ALOXE3 (ENSPPYG00000007947) #29	HES7 (ENSPPYG00000007948) #30	PER1 (ENSPPYG00000007949)	ENSPPYG00000036849 #31	ENSPPYG00000033854 #32	TMEM107 (ENSPPYG00000030922) #33	BORCS6 (ENSPPYG00000007951) #34	ENSPPYG00000007952
Gibbon	MODERN SPECIES	9	SOX15 (ENSNLEG00000009660) #11	MPDU1 (ENSNLEG00000009643) #12	FXR2 (ENSNLEG00000009662) #13	SAT2 (ENSNLEG00000009698) #14	SHBG (ENSNLEG00000009705)	ENSNLEG00000018259	ATP1B2 (ENSNLEG00000009726) #15	TP53 (ENSNLEG00000009730) #16	WRAP53 (ENSNLEG00000009753) #17	ENSNLEG00000009761	DNAH2 (ENSNLEG00000009763)	KDM6B (ENSNLEG00000036136) #18	TMEM88 (ENSNLEG00000009773) #19	CYB5D1 (ENSNLEG00000009777) #21	ENSNLEG00000027601 #20	CHD3 (ENSNLEG00000009770) #22	RNF227 (ENSNLEG00000032354) #23	KCNAB3 (ENSNLEG00000036112) #24	TRAPPC1 (ENSNLEG00000009796) #25	CNTROB (ENSNLEG00000009803) #26	GUCY2D (ENSNLEG00000009820)	ALOX12B (ENSNLEG00000009833) #28	ALOXE3 (ENSNLEG00000009843) #29	HES7 (ENSNLEG00000027438) #30	PER1 (ENSNLEG00000009876)	VAMP2 (ENSNLEG00000009836) #32	TMEM107 (ENSNLEG00000031806) #33	ENSNLEG00000009908	ENSNLEG00000033237 #35	CTC1 (ENSNLEG00000009917) #37	ENSNLEG00000009956
Cercopithecidae	ANCESTRAL SPECIES	26	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Cercopithecinae_b	ANCESTRAL SPECIES	26	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Cercopithecinae_d	ANCESTRAL SPECIES	14	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Sooty mangabey	MODERN SPECIES	111	CD68 (ENSCATG00000041736)	SOX15 (ENSCATG00000040468) #11	MPDU1 (ENSCATG00000028120) #12	FXR2 (ENSCATG00000039859) #13	SAT2 (ENSCATG00000000140) #14	SHBG (ENSCATG00000017374)	ATP1B2 (ENSCATG00000034239) #15	TP53 (ENSCATG00000039093) #16	WRAP53 (ENSCATG00000037604) #17	EFNB3 (ENSCATG00000040835)	DNAH2 (ENSCATG00000044804)	KDM6B (ENSCATG00000043776) #18	TMEM88 (ENSCATG00000042149) #19	CYB5D1 (ENSCATG00000030804) #21	NAA38 (ENSCATG00000032806) #20	CHD3 (ENSCATG00000041717) #22	RNF227 (ENSCATG00000027881) #23	KCNAB3 (ENSCATG00000034841) #24	TRAPPC1 (ENSCATG00000037906) #25	CNTROB (ENSCATG00000030776) #26	GUCY2D (ENSCATG00000012919)	ALOX15B (ENSCATG00000041311)	ALOX12B (ENSCATG00000035312) #28	ALOXE3 (ENSCATG00000043136) #29	HES7 (ENSCATG00000033785) #30	PER1 (ENSCATG00000041578)	VAMP2 (ENSCATG00000036062) #32	TMEM107 (ENSCATG00000034323) #33	ENSCATG00000020869	BORCS6 (ENSCATG00000021240) #34	AURKB (ENSCATG00000044113) #35
Drill	MODERN SPECIES	1146	CD68 (ENSMLEG00000042433)	MPDU1 (ENSMLEG00000013173) #12	SOX15 (ENSMLEG00000042554) #11	FXR2 (ENSMLEG00000034764) #13	SAT2 (ENSMLEG00000038252) #14	SHBG (ENSMLEG00000029937)	ATP1B2 (ENSMLEG00000029537) #15	TP53 (ENSMLEG00000042592) #16	WRAP53 (ENSMLEG00000017731) #17	EFNB3 (ENSMLEG00000031368)	DNAH2 (ENSMLEG00000016835)	KDM6B (ENSMLEG00000038010) #18	TMEM88 (ENSMLEG00000001580) #19	CYB5D1 (ENSMLEG00000034639) #21	NAA38 (ENSMLEG00000037461) #20	CHD3 (ENSMLEG00000032249) #22	ENSMLEG00000028580	KCNAB3 (ENSMLEG00000027562) #24	TRAPPC1 (ENSMLEG00000043008) #25	CNTROB (ENSMLEG00000031828) #26	GUCY2D (ENSMLEG00000041068)	ALOX15B (ENSMLEG00000033978)	ALOX12B (ENSMLEG00000035234) #28	ALOXE3 (ENSMLEG00000034125) #29	ENSMLEG00000035483 #30	PER1 (ENSMLEG00000034085)	VAMP2 (ENSMLEG00000007780) #32	TMEM107 (ENSMLEG00000041590) #33	ENSMLEG00000013466	BORCS6 (ENSMLEG00000027416) #34	AURKB (ENSMLEG00000039429) #35
Olive baboon	MODERN SPECIES	8	CD68 (ENSPANG00000024092)	MPDU1 (ENSPANG00000024055) #12	SOX15 (ENSPANG00000024056) #11	FXR2 (ENSPANG00000024057) #13	SAT2 (ENSPANG00000035750) #14	SHBG (ENSPANG00000024059)	ATP1B2 (ENSPANG00000024060) #15	TP53 (ENSPANG00000024061) #16	WRAP53 (ENSPANG00000024062) #17	EFNB3 (ENSPANG00000049483)	DNAH2 (ENSPANG00000030477)	KDM6B (ENSPANG00000024053) #18	ENSPANG00000023934	NAA38 (ENSPANG00000023935) #20	CYB5D1 (ENSPANG00000023937) #21	CHD3 (ENSPANG00000023938) #22	ENSPANG00000048944	KCNAB3 (ENSPANG00000023939) #24	TRAPPC1 (ENSPANG00000023940) #25	CNTROB (ENSPANG00000023932) #26	GUCY2D (ENSPANG00000023931)	ALOX15B (ENSPANG00000023835)	ALOX12B (ENSPANG00000023836) #28	ALOXE3 (ENSPANG00000023838) #29	HES7 (ENSPANG00000023839) #30	PER1 (ENSPANG00000023840)	ENSPANG00000044708 #31	VAMP2 (ENSPANG00000035763) #32	ENSPANG00000023842 #33	BORCS6 (ENSPANG00000042932) #34	ENSPANG00000034804
Macaca	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943	ENSGT00940000158980 #35
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000161627.a.a.a.b.a.b.b.b.a.b.b	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Rhesus	MODERN SPECIES	7	MPDU1 (ENSMMUG00000013503) #12	SOX15 (ENSMMUG00000057228) #11	FXR2 (ENSMMUG00000013510) #13	SAT2 (ENSMMUG00000013511) #14	SHBG (ENSMMUG00000013513)	ATP1B2 (ENSMMUG00000044486) #15	TP53 (ENSMMUG00000008639) #16	WRAP53 (ENSMMUG00000008637) #17	EFNB3 (ENSMMUG00000048204)	DNAH2 (ENSMMUG00000008166)	ENSMMUG00000049849	KDM6B (ENSMMUG00000008173) #18	TMEM88 (ENSMMUG00000008176) #19	NAA38 (ENSMMUG00000008178) #20	CYB5D1 (ENSMMUG00000063668) #21	CHD3 (ENSMMUG00000022221) #22	RNF227 (ENSMMUG00000046058) #23	KCNAB3 (ENSMMUG00000022230) #24	TRAPPC1 (ENSMMUG00000055778) #25	CNTROB (ENSMMUG00000022225) #26	GUCY2D (ENSMMUG00000017723)	ENSMMUG00000065208	ALOX12B (ENSMMUG00000020329) #28	ALOXE3 (ENSMMUG00000019850) #29	HES7 (ENSMMUG00000019851) #30	PER1 (ENSMMUG00000021798)	TMEM107 (ENSMMUG00000055944) #33	BORCS6 (ENSMMUG00000051613) #34	ENSMMUG00000002999	AURKB (ENSMMUG00000002997) #35	CTC1 (ENSMMUG00000001938) #37
Crab-eating macaque	MODERN SPECIES	7	TNFSF12 (ENSMFAG00000002034) #7	TNFSF13 (ENSMFAG00000039025) #8	SENP3 (ENSMFAG00000039010)	CD68 (ENSMFAG00000032792)	MPDU1 (ENSMFAG00000041864) #12	FXR2 (ENSMFAG00000043282) #13	SAT2 (ENSMFAG00000001081) #14	SHBG (ENSMFAG00000000521)	ATP1B2 (ENSMFAG00000039656) #15	TP53 (ENSMFAG00000038506) #16	WRAP53 (ENSMFAG00000033679) #17	EFNB3 (ENSMFAG00000052831)	DNAH2 (ENSMFAG00000003133)	TMEM88 (ENSMFAG00000002896) #19	NAA38 (ENSMFAG00000037580) #20	CHD3 (ENSMFAG00000020113) #22	ENSMFAG00000065437	KCNAB3 (ENSMFAG00000040577) #24	TRAPPC1 (ENSMFAG00000036509) #25	CNTROB (ENSMFAG00000009931) #26	GUCY2D (ENSMFAG00000031931)	ALOX15B (ENSMFAG00000002960)	ENSMFAG00000059010	ALOX12B (ENSMFAG00000001379) #28	ALOXE3 (ENSMFAG00000042832) #29	HES7 (ENSMFAG00000034203) #30	PER1 (ENSMFAG00000043997)	VAMP2 (ENSMFAG00000031462) #32	TMEM107 (ENSMFAG00000033067) #33	AURKB (ENSMFAG00000038167) #35	ENSMFAG00000053256
Pig-tailed macaque	MODERN SPECIES	94	CD68 (ENSMNEG00000039057)	MPDU1 (ENSMNEG00000034487) #12	SOX15 (ENSMNEG00000038412) #11	FXR2 (ENSMNEG00000031195) #13	SAT2 (ENSMNEG00000040277) #14	SHBG (ENSMNEG00000038821)	ATP1B2 (ENSMNEG00000044869) #15	TP53 (ENSMNEG00000038875) #16	WRAP53 (ENSMNEG00000036812) #17	EFNB3 (ENSMNEG00000029996)	DNAH2 (ENSMNEG00000033625)	KDM6B (ENSMNEG00000040752) #18	TMEM88 (ENSMNEG00000039594) #19	NAA38 (ENSMNEG00000031597) #20	CYB5D1 (ENSMNEG00000034836) #21	CHD3 (ENSMNEG00000001728) #22	RNF227 (ENSMNEG00000045490) #23	KCNAB3 (ENSMNEG00000040660) #24	TRAPPC1 (ENSMNEG00000032756) #25	CNTROB (ENSMNEG00000030494) #26	GUCY2D (ENSMNEG00000031234)	ALOX15B (ENSMNEG00000043280)	ALOX12B (ENSMNEG00000042459) #28	ALOXE3 (ENSMNEG00000037550) #29	HES7 (ENSMNEG00000038349) #30	PER1 (ENSMNEG00000037582)	VAMP2 (ENSMNEG00000005649) #32	TMEM107 (ENSMNEG00000028413) #33	BORCS6 (ENSMNEG00000002884) #34	ENSMNEG00000010924	AURKB (ENSMNEG00000028418) #35
Vervet Monkey	MODERN SPECIES	7	CD68 (ENSCSAG00000011452)	MPDU1 (ENSCSAG00000011425) #12	SOX15 (ENSCSAG00000011393) #11	FXR2 (ENSCSAG00000011386) #13	SAT2 (ENSCSAG00000011371) #14	SHBG (ENSCSAG00000011359)	ATP1B2 (ENSCSAG00000011352) #15	TP53 (ENSCSAG00000011345) #16	WRAP53 (ENSCSAG00000011338) #17	EFNB3 (ENSCSAG00000011328)	DNAH2 (ENSCSAG00000011272)	KDM6B (ENSCSAG00000011157) #18	TMEM88 (ENSCSAG00000011143) #19	NAA38 (ENSCSAG00000011136) #20	CYB5D1 (ENSCSAG00000011130) #21	CHD3 (ENSCSAG00000011122) #22	KCNAB3 (ENSCSAG00000011097) #24	TRAPPC1 (ENSCSAG00000011079) #25	CNTROB (ENSCSAG00000011070) #26	GUCY2D (ENSCSAG00000011056)	ALOX15B (ENSCSAG00000010996)	ALOX12B (ENSCSAG00000010863) #28	ALOXE3 (ENSCSAG00000010801) #29	HES7 (ENSCSAG00000010748) #30	PER1 (ENSCSAG00000010737)	ENSCSAG00000010718 #32	TMEM107 (ENSCSAG00000010712) #33	BORCS6 (ENSCSAG00000000565) #34	AURKB (ENSCSAG00000010702) #35	CTC1 (ENSCSAG00000010689) #37	PFAS (ENSCSAG00000010611)
Rhinopithecus	ANCESTRAL SPECIES	6	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943	ENSGT00940000158980.e #35
Golden snub-nosed monkey	MODERN SPECIES	1023	MPDU1 (ENSRROG00000039715) #12	SOX15 (ENSRROG00000035518) #11	FXR2 (ENSRROG00000035470) #13	SAT2 (ENSRROG00000002103) #14	SHBG (ENSRROG00000041036)	ATP1B2 (ENSRROG00000043331) #15	TP53 (ENSRROG00000037163) #16	WRAP53 (ENSRROG00000032629) #17	EFNB3 (ENSRROG00000045493)	DNAH2 (ENSRROG00000035849)	ENSRROG00000028496	KDM6B (ENSRROG00000030681) #18	TMEM88 (ENSRROG00000043517) #19	NAA38 (ENSRROG00000037370) #20	CYB5D1 (ENSRROG00000033738) #21	CHD3 (ENSRROG00000029554) #22	RNF227 (ENSRROG00000037731) #23	KCNAB3 (ENSRROG00000040156) #24	TRAPPC1 (ENSRROG00000029283) #25	CNTROB (ENSRROG00000043667) #26	GUCY2D (ENSRROG00000005382)	ENSRROG00000019216	ALOX15B (ENSRROG00000039498)	ALOX12B (ENSRROG00000036486) #28	ALOXE3 (ENSRROG00000028855) #29	HES7 (ENSRROG00000045527) #30	PER1 (ENSRROG00000032724)	VAMP2 (ENSRROG00000030243) #32	TMEM107 (ENSRROG00000030520) #33	BORCS6 (ENSRROG00000010160) #34	ENSRROG00000011984
Black snub-nosed monkey	MODERN SPECIES	1512	CD68 (ENSRBIG00000040396)	MPDU1 (ENSRBIG00000025521) #12	SOX15 (ENSRBIG00000025597) #11	FXR2 (ENSRBIG00000034647) #13	SAT2 (ENSRBIG00000028746) #14	SHBG (ENSRBIG00000034360)	ATP1B2 (ENSRBIG00000043880) #15	TP53 (ENSRBIG00000038164) #16	WRAP53 (ENSRBIG00000035756) #17	EFNB3 (ENSRBIG00000021710)	DNAH2 (ENSRBIG00000032058)	KDM6B (ENSRBIG00000032265) #18	TMEM88 (ENSRBIG00000041639) #19	NAA38 (ENSRBIG00000039054) #20	CYB5D1 (ENSRBIG00000031810) #21	CHD3 (ENSRBIG00000033562) #22	RNF227 (ENSRBIG00000039918) #23	KCNAB3 (ENSRBIG00000036785) #24	TRAPPC1 (ENSRBIG00000039656) #25	CNTROB (ENSRBIG00000026983) #26	GUCY2D (ENSRBIG00000038244)	ALOX15B (ENSRBIG00000028437)	ALOX12B (ENSRBIG00000035662) #28	ALOXE3 (ENSRBIG00000035247) #29	HES7 (ENSRBIG00000025704) #30	PER1 (ENSRBIG00000016555)	VAMP2 (ENSRBIG00000044504) #32	TMEM107 (ENSRBIG00000036363) #33	BORCS6 (ENSRBIG00000024371) #34	ENSRBIG00000001370	AURKB (ENSRBIG00000039041) #35
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099.a #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a.h.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Cebidae	ANCESTRAL SPECIES	10	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099.a #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a.h.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099.a #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a.h.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Capuchin	MODERN SPECIES	72	MPDU1 (ENSCCAG00000034105) #12	SOX15 (ENSCCAG00000026871) #11	FXR2 (ENSCCAG00000013516) #13	SAT2 (ENSCCAG00000020389) #14	SHBG (ENSCCAG00000036241)	ATP1B2 (ENSCCAG00000026533) #15	TP53 (ENSCCAG00000032786) #16	WRAP53 (ENSCCAG00000033471) #17	EFNB3 (ENSCCAG00000027538)	DNAH2 (ENSCCAG00000024867)	ENSCCAG00000013286	KDM6B (ENSCCAG00000037137) #18	NAA38 (ENSCCAG00000021358) #20	CYB5D1 (ENSCCAG00000017780) #21	RNF227 (ENSCCAG00000036242) #23	CHD3 (ENSCCAG00000034792) #22	KCNAB3 (ENSCCAG00000026835) #24	TRAPPC1 (ENSCCAG00000012314) #25	CNTROB (ENSCCAG00000006668) #26	GUCY2D (ENSCCAG00000024015)	ALOX15B (ENSCCAG00000029779)	ALOX12B (ENSCCAG00000036174) #28	ALOXE3 (ENSCCAG00000001562) #29	HES7 (ENSCCAG00000033810) #30	PER1 (ENSCCAG00000037305)	ENSCCAG00000022876 #31	VAMP2 (ENSCCAG00000021959) #32	TMEM107 (ENSCCAG00000034338) #33	AURKB (ENSCCAG00000027231) #35	CTC1 (ENSCCAG00000018012) #37	PFAS (ENSCCAG00000029121)
Bolivian squirrel monkey	MODERN SPECIES	74	CD68 (ENSSBOG00000032218)	MPDU1 (ENSSBOG00000034039) #12	SOX15 (ENSSBOG00000031727) #11	FXR2 (ENSSBOG00000031395) #13	SAT2 (ENSSBOG00000022741) #14	SHBG (ENSSBOG00000024727)	ATP1B2 (ENSSBOG00000024391) #15	TP53 (ENSSBOG00000020983) #16	WRAP53 (ENSSBOG00000023171) #17	EFNB3 (ENSSBOG00000028321)	DNAH2 (ENSSBOG00000010082)	KDM6B (ENSSBOG00000031259) #18	TMEM88 (ENSSBOG00000035546) #19	NAA38 (ENSSBOG00000035591) #20	CYB5D1 (ENSSBOG00000028583) #21	CHD3 (ENSSBOG00000020719) #22	KCNAB3 (ENSSBOG00000024892) #24	TRAPPC1 (ENSSBOG00000032902) #25	CNTROB (ENSSBOG00000013350) #26	GUCY2D (ENSSBOG00000034270)	ALOX15B (ENSSBOG00000035660)	ALOX12B (ENSSBOG00000026031) #28	ALOXE3 (ENSSBOG00000023509) #29	HES7 (ENSSBOG00000023724) #30	PER1 (ENSSBOG00000035418)	VAMP2 (ENSSBOG00000025190) #32	ENSSBOG00000033745 #31	TMEM107 (ENSSBOG00000024275) #33	AURKB (ENSSBOG00000023722) #35	CTC1 (ENSSBOG00000033635) #37	PFAS (ENSSBOG00000035060)
Marmoset	MODERN SPECIES	17	MPDU1 (ENSCJAG00000015095) #12	SOX15 (ENSCJAG00000007951) #11	FXR2 (ENSCJAG00000015063) #13	SAT2 (ENSCJAG00000015055) #14	SHBG (ENSCJAG00000015035)	ATP1B2 (ENSCJAG00000015019) #15	TP53 (ENSCJAG00000014978) #16	WRAP53 (ENSCJAG00000014965) #17	EFNB3 (ENSCJAG00000044444)	DNAH2 (ENSCJAG00000014881)	ENSCJAG00000084720	KDM6B (ENSCJAG00000014850) #18	TMEM88 (ENSCJAG00000083328) #19	NAA38 (ENSCJAG00000014843) #20	CYB5D1 (ENSCJAG00000014841) #21	CHD3 (ENSCJAG00000014766) #22	RNF227 (ENSCJAG00000041018) #23	KCNAB3 (ENSCJAG00000014760) #24	TRAPPC1 (ENSCJAG00000072023) #25	CNTROB (ENSCJAG00000014727) #26	GUCY2D (ENSCJAG00000014688)	ALOX12B (ENSCJAG00000014652) #28	ALOXE3 (ENSCJAG00000014599) #29	HES7 (ENSCJAG00000014589) #30	PER1 (ENSCJAG00000014556)	VAMP2 (ENSCJAG00000014540) #32	TMEM107 (ENSCJAG00000014534) #33	BORCS6 (ENSCJAG00000023107) #34	ENSCJAG00000043213	ENSCJAG00000074899	AURKB (ENSCJAG00000015677) #35
Mas night monkey	MODERN SPECIES	807	CD68 (ENSANAG00000037344)	MPDU1 (ENSANAG00000026260) #12	SOX15 (ENSANAG00000038364) #11	FXR2 (ENSANAG00000023710) #13	SAT2 (ENSANAG00000035086) #14	SHBG (ENSANAG00000037137)	ATP1B2 (ENSANAG00000021385) #15	ENSANAG00000027861 #16	WRAP53 (ENSANAG00000026764) #17	EFNB3 (ENSANAG00000030573)	DNAH2 (ENSANAG00000022783)	KDM6B (ENSANAG00000021278) #18	NAA38 (ENSANAG00000027273) #20	TMEM88 (ENSANAG00000034510) #19	CYB5D1 (ENSANAG00000037580) #21	CHD3 (ENSANAG00000034323) #22	RNF227 (ENSANAG00000024198) #23	KCNAB3 (ENSANAG00000032405) #24	TRAPPC1 (ENSANAG00000027429) #25	CNTROB (ENSANAG00000038403) #26	GUCY2D (ENSANAG00000033657)	ENSANAG00000029957	ALOX15B (ENSANAG00000032304)	ALOX12B (ENSANAG00000032346) #28	ALOXE3 (ENSANAG00000030412) #29	HES7 (ENSANAG00000026656) #30	PER1 (ENSANAG00000022319)	ENSANAG00000028840 #31	VAMP2 (ENSANAG00000032784) #32	TMEM107 (ENSANAG00000034345) #33	AURKB (ENSANAG00000035885) #35
Tarsier	MODERN SPECIES	5154	CD68 (ENSTSYG00000004561) #10	MPDU1 (ENSTSYG00000025837) #12	SOX15 (ENSTSYG00000032210) #11	FXR2 (ENSTSYG00000004564) #13	SAT2 (ENSTSYG00000013209) #14	SHBG (ENSTSYG00000014562)	ATP1B2 (ENSTSYG00000028614) #15	TP53 (ENSTSYG00000034279) #16	WRAP53 (ENSTSYG00000009279) #17	EFNB3 (ENSTSYG00000026018)	DNAH2 (ENSTSYG00000000958)	KDM6B (ENSTSYG00000028891) #18	TMEM88 (ENSTSYG00000025417) #19	NAA38 (ENSTSYG00000033326) #20	CYB5D1 (ENSTSYG00000036979) #21	CHD3 (ENSTSYG00000035658) #22	RNF227 (ENSTSYG00000008705) #23	KCNAB3 (ENSTSYG00000037194) #24	TRAPPC1 (ENSTSYG00000030114) #25	CNTROB (ENSTSYG00000008107) #26	GUCY2D (ENSTSYG00000008254)
Strepsirrhini	ANCESTRAL SPECIES	21	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Lemuriformes	ANCESTRAL SPECIES	33	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Mouse lemur	MODERN SPECIES	7	ENSMICG00000014773 #10	SOX15 (ENSMICG00000042795) #11	MPDU1 (ENSMICG00000014782) #12	FXR2 (ENSMICG00000014799) #13	SAT2 (ENSMICG00000014822) #14	SHBG (ENSMICG00000014832)	ATP1B2 (ENSMICG00000036264) #15	TP53 (ENSMICG00000014853) #16	WRAP53 (ENSMICG00000014862) #17	EFNB3 (ENSMICG00000034462)	DNAH2 (ENSMICG00000014873)	KDM6B (ENSMICG00000015117) #18	TMEM88 (ENSMICG00000038093) #19	CYB5D1 (ENSMICG00000015154) #21	NAA38 (ENSMICG00000015147) #20	CHD3 (ENSMICG00000008741) #22	RNF227 (ENSMICG00000030993) #23	KCNAB3 (ENSMICG00000008830) #24	TRAPPC1 (ENSMICG00000033485) #25	CNTROB (ENSMICG00000008866) #26	GUCY2D (ENSMICG00000013617)	ALOX15B (ENSMICG00000013649)	ALOX12B (ENSMICG00000013664) #28	ALOXE3 (ENSMICG00000013685) #29	HES7 (ENSMICG00000043316) #30	PER1 (ENSMICG00000013724)	VAMP2 (ENSMICG00000013748) #32	TMEM107 (ENSMICG00000045002) #33	AURKB (ENSMICG00000029675) #35	CTC1 (ENSMICG00000013795) #37	PFAS (ENSMICG00000013822)
Lemuriformes_a	ANCESTRAL SPECIES	45	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Coquerels sifaka	MODERN SPECIES	637	SOX15 (ENSPCOG00000015435) #11	MPDU1 (ENSPCOG00000025499) #12	FXR2 (ENSPCOG00000024603) #13	SAT2 (ENSPCOG00000020366) #14	SHBG (ENSPCOG00000024453)	ATP1B2 (ENSPCOG00000028840) #15	TP53 (ENSPCOG00000028656) #16	WRAP53 (ENSPCOG00000027329) #17	EFNB3 (ENSPCOG00000019954)	ENSPCOG00000024965	DNAH2 (ENSPCOG00000020639)	KDM6B (ENSPCOG00000024321) #18	TMEM88 (ENSPCOG00000019225) #19	CYB5D1 (ENSPCOG00000026448) #21	NAA38 (ENSPCOG00000020844) #20	CHD3 (ENSPCOG00000020952) #22	RNF227 (ENSPCOG00000014132) #23	KCNAB3 (ENSPCOG00000028829) #24	TRAPPC1 (ENSPCOG00000027403) #25	CNTROB (ENSPCOG00000014851) #26	GUCY2D (ENSPCOG00000026013)	ALOX15B (ENSPCOG00000006202)	ALOX12B (ENSPCOG00000017759) #28	ALOXE3 (ENSPCOG00000027053) #29	HES7 (ENSPCOG00000014645) #30	PER1 (ENSPCOG00000016795)	VAMP2 (ENSPCOG00000011687) #32	TMEM107 (ENSPCOG00000016307) #33	ENSPCOG00000018927 #35	CTC1 (ENSPCOG00000026556) #37	PFAS (ENSPCOG00000017107)
Greater bamboo lemur	MODERN SPECIES	365	SOX15 (ENSPSMG00000019093) #11	MPDU1 (ENSPSMG00000019052) #12	FXR2 (ENSPSMG00000018995) #13	SAT2 (ENSPSMG00000018971) #14	SHBG (ENSPSMG00000018923)	ATP1B2 (ENSPSMG00000018859) #15	TP53 (ENSPSMG00000018689) #16	WRAP53 (ENSPSMG00000018546) #17	EFNB3 (ENSPSMG00000018480)	ENSPSMG00000018444	DNAH2 (ENSPSMG00000018427)	KDM6B (ENSPSMG00000018389) #18	TMEM88 (ENSPSMG00000018362) #19	NAA38 (ENSPSMG00000018356) #20	CYB5D1 (ENSPSMG00000018348) #21	CHD3 (ENSPSMG00000018318) #22	RNF227 (ENSPSMG00000018255) #23	KCNAB3 (ENSPSMG00000018250) #24	TRAPPC1 (ENSPSMG00000018230) #25	CNTROB (ENSPSMG00000018215) #26	GUCY2D (ENSPSMG00000018198)	ENSPSMG00000018192	ALOX15B (ENSPSMG00000018141)	ALOX12B (ENSPSMG00000018072) #28	ALOXE3 (ENSPSMG00000018044) #29	HES7 (ENSPSMG00000018032) #30	PER1 (ENSPSMG00000017939)	VAMP2 (ENSPSMG00000017776) #32	TMEM107 (ENSPSMG00000017761) #33	ENSPSMG00000017738	BORCS6 (ENSPSMG00000017737) #34
Bushbaby	MODERN SPECIES	161	CD68 (ENSOGAG00000008138)	MPDU1 (ENSOGAG00000008141) #12	SOX15 (ENSOGAG00000008145) #11	FXR2 (ENSOGAG00000008146) #13	SAT2 (ENSOGAG00000016867) #14	SHBG (ENSOGAG00000029184)	ATP1B2 (ENSOGAG00000009564) #15	TP53 (ENSOGAG00000016871) #16	WRAP53 (ENSOGAG00000001916) #17	EFNB3 (ENSOGAG00000001453)	DNAH2 (ENSOGAG00000002181)	KDM6B (ENSOGAG00000003207) #18	TMEM88 (ENSOGAG00000029549) #19	NAA38 (ENSOGAG00000030727) #20	CYB5D1 (ENSOGAG00000027927) #21	CHD3 (ENSOGAG00000003216) #22	ENSOGAG00000003219	KCNAB3 (ENSOGAG00000008025) #24	TRAPPC1 (ENSOGAG00000032218) #25	CNTROB (ENSOGAG00000034061) #26	GUCY2D (ENSOGAG00000001946)	ALOX15B (ENSOGAG00000001949)	ENSOGAG00000029335	ALOX12B (ENSOGAG00000001954) #28	ALOXE3 (ENSOGAG00000001959) #29	HES7 (ENSOGAG00000026608) #30	PER1 (ENSOGAG00000026695)	VAMP2 (ENSOGAG00000001961) #32	TMEM107 (ENSOGAG00000029496) #33	ENSOGAG00000001962	BORCS6 (ENSOGAG00000031088) #34
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Eulipotyphla	ANCESTRAL SPECIES	20											ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582.h #21	ENSGT00440000037582.g #21	ENSGT00940000158001 #22	ENSGT00940000166612	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26
Common shrew	MODERN SPECIES	5068																ENSSARG00000010492 #22	ENSSARG00000010533	KCNAB3 (ENSSARG00000010541) #24	TRAPPC1 (ENSSARG00000010582) #25	CNTROB (ENSSARG00000010590) #26
Hedgehog	MODERN SPECIES	2925												ENSEEUG00000015080 #18	TMEM88 (ENSEEUG00000015141) #19	ENSEEUG00000015146 #21	ENSEEUG00000015202 #21	CHD3 (ENSEEUG00000015205) #22
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081
Suina	ANCESTRAL SPECIES		ENSGT00940000153889.e.a.b ##9	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Pig	MODERN SPECIES	3	TNFSF13 (ENSSSCG00000036521) #8	EIF4A1 (ENSSSCG00000017957) ##9	CD68 (ENSSSCG00000017956)	MPDU1 (ENSSSCG00000017955) #12	FXR2 (ENSSSCG00000017953) #13	SAT2 (ENSSSCG00000017952) #14	ATP1B2 (ENSSSCG00000017951) #15	TP53 (ENSSSCG00000017950) #16	WRAP53 (ENSSSCG00000017949) #17	EFNB3 (ENSSSCG00000017948)	DNAH2 (ENSSSCG00000017963)	KDM6B (ENSSSCG00000017962) #18	TMEM88 (ENSSSCG00000037096) #19	ENSSSCG00000017971 #20	CYB5D1 (ENSSSCG00000059632) #21	CHD3 (ENSSSCG00000021363) #22	RNF227 (ENSSSCG00000023166) #23	KCNAB3 (ENSSSCG00000037973) #24	CNTROB (ENSSSCG00000017968) #26	GUCY2D (ENSSSCG00000025345)	ALOX15B (ENSSSCG00000017978)	ALOX12B (ENSSSCG00000017980) #28	ALOXE3 (ENSSSCG00000017981) #29	HES7 (ENSSSCG00000060339) #30	PER1 (ENSSSCG00000017983)	VAMP2 (ENSSSCG00000034868) #32	TMEM107 (ENSSSCG00000027528) #33	BORCS6 (ENSSSCG00000028788) #34	AURKB (ENSSSCG00000028924) #35	CTC1 (ENSSSCG00000026818) #37	ENSSSCG00000049011
Chacoan peccary	MODERN SPECIES	869												KDM6B (ENSCWAG00000006048) #18	TMEM88 (ENSCWAG00000006113) #19	NAA38 (ENSCWAG00000006139) #20	CYB5D1 (ENSCWAG00000006203) #21	CHD3 (ENSCWAG00000006298) #22	RNF227 (ENSCWAG00000007086) #23	KCNAB3 (ENSCWAG00000007108) #24	TRAPPC1 (ENSCWAG00000007172) #25	CNTROB (ENSCWAG00000007213) #26	GUCY2D (ENSCWAG00000007485)	ALOX15B (ENSCWAG00000007605)	ENSCWAG00000008531	ALOX12B (ENSCWAG00000013426) #28	ALOXE3 (ENSCWAG00000013596) #29	HES7 (ENSCWAG00000013709) #30	PER1 (ENSCWAG00000013755)	ENSCWAG00000013819 #31	VAMP2 (ENSCWAG00000013884) #32	TMEM107 (ENSCWAG00000013989) #33	BORCS6 (ENSCWAG00000014029) #34
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000164775 #10	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980.a #35	ENSGT00390000002974
Odontoceti	ANCESTRAL SPECIES	17	ENSGT00940000164775 #10	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418.d #20	ENSGT00440000037582.j #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980.a #35	ENSGT00390000002974
Odontoceti_a	ANCESTRAL SPECIES	18	ENSGT00940000164775 #10	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418.d #20	ENSGT00440000037582.j #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980.a #35	ENSGT00390000002974	ENSGT00390000011553 #37
Odontoceti_b	ANCESTRAL SPECIES	20	ENSGT00940000164775 #10	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418.d #20	ENSGT00440000037582.j #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980.a #35	ENSGT00390000011553 #37	ENSGT00390000007600
Monodontidae	ANCESTRAL SPECIES	21	ENSGT00940000164775 #10	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418.d #20	ENSGT00440000037582.j #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980.a #35	ENSGT00390000011553 #37	ENSGT00390000007600	ENSGT00390000013834
Beluga whale	MODERN SPECIES	43	SENP3 (ENSDLEG00000021080)	EIF4A1 (ENSDLEG00000021084) ##9	ENSDLEG00000021095 #10	MPDU1 (ENSDLEG00000021110) #12	SOX15 (ENSDLEG00000021126) #11	FXR2 (ENSDLEG00000021129) #13	SHBG (ENSDLEG00000021151)	ATP1B2 (ENSDLEG00000021158) #15	TP53 (ENSDLEG00000021163) #16	WRAP53 (ENSDLEG00000021177) #17	EFNB3 (ENSDLEG00000021183)	DNAH2 (ENSDLEG00000021195)	KDM6B (ENSDLEG00000021231) #18	TMEM88 (ENSDLEG00000021234) #19	NAA38 (ENSDLEG00000021236) #20	CHD3 (ENSDLEG00000021310) #22	KCNAB3 (ENSDLEG00000021582) #24	TRAPPC1 (ENSDLEG00000021618) #25	CNTROB (ENSDLEG00000021631) #26	GUCY2D (ENSDLEG00000021684)	ALOX15B (ENSDLEG00000021712)	ALOXE3 (ENSDLEG00000021718) #29	HES7 (ENSDLEG00000021725) #30	PER1 (ENSDLEG00000021732)	VAMP2 (ENSDLEG00000021743) #32	TMEM107 (ENSDLEG00000021746) #33	BORCS6 (ENSDLEG00000021750) #34	AURKB (ENSDLEG00000021754) #35	CTC1 (ENSDLEG00000021755) #37	PFAS (ENSDLEG00000021764)	RANGRF (ENSDLEG00000021772)
Narwhal	MODERN SPECIES	316	ENSMMNG00015016759 #10	SOX15 (ENSMMNG00015016727) #11	MPDU1 (ENSMMNG00015016603) #12	FXR2 (ENSMMNG00015016533) #13	SAT2 (ENSMMNG00015016481) #14	SHBG (ENSMMNG00015016387)	ATP1B2 (ENSMMNG00015016318) #15	TP53 (ENSMMNG00015016161) #16	WRAP53 (ENSMMNG00015016083) #17	EFNB3 (ENSMMNG00015016009)	DNAH2 (ENSMMNG00015021587)	KDM6B (ENSMMNG00015021524) #18	TMEM88 (ENSMMNG00015021511) #19	CYB5D1 (ENSMMNG00015021498) #21	ENSMMNG00015021486 #20	CHD3 (ENSMMNG00015021409) #22	KCNAB3 (ENSMMNG00015021334) #24	TRAPPC1 (ENSMMNG00015021316) #25	CNTROB (ENSMMNG00015021276) #26	GUCY2D (ENSMMNG00015021239)	ALOX15B (ENSMMNG00015021169)	ALOXE3 (ENSMMNG00015021075) #29	HES7 (ENSMMNG00015021032) #30	PER1 (ENSMMNG00015020995)	VAMP2 (ENSMMNG00015020962) #32	TMEM107 (ENSMMNG00015020927) #33	BORCS6 (ENSMMNG00015020904) #34	ENSMMNG00015020894 #35	CTC1 (ENSMMNG00015020857) #37	PFAS (ENSMMNG00015020777)	RANGRF (ENSMMNG00015020734)
Vaquita	MODERN SPECIES	12	SENP3 (ENSPSNG00000011169)	ENSPSNG00000011027 #10	MPDU1 (ENSPSNG00000010966) #12	SOX15 (ENSPSNG00000010908) #11	FXR2 (ENSPSNG00000010784) #13	SHBG (ENSPSNG00000010187)	ATP1B2 (ENSPSNG00000009989) #15	TP53 (ENSPSNG00000009871) #16	WRAP53 (ENSPSNG00000009680) #17	EFNB3 (ENSPSNG00000009549)	DNAH2 (ENSPSNG00000022448)	KDM6B (ENSPSNG00000022425) #18	TMEM88 (ENSPSNG00000022422) #19	CYB5D1 (ENSPSNG00000022418) #21	ENSPSNG00000022413 #20	CHD3 (ENSPSNG00000022376) #22	RNF227 (ENSPSNG00000022366) #23	KCNAB3 (ENSPSNG00000022358) #24	TRAPPC1 (ENSPSNG00000022349) #25	CNTROB (ENSPSNG00000022346) #26	GUCY2D (ENSPSNG00000022338)	ALOX15B (ENSPSNG00000022319)	ALOXE3 (ENSPSNG00000022230) #29	HES7 (ENSPSNG00000022190) #30	PER1 (ENSPSNG00000022172)	VAMP2 (ENSPSNG00000022155) #32	TMEM107 (ENSPSNG00000022140) #33	BORCS6 (ENSPSNG00000022125) #34	ENSPSNG00000022113 #35	CTC1 (ENSPSNG00000022102) #37	PFAS (ENSPSNG00000022053)
Dolphin	MODERN SPECIES	1363	EIF4A1 (ENSTTRG00000010208) ##9	ENSTTRG00000010216 #10	MPDU1 (ENSTTRG00000010221) #12	SOX15 (ENSTTRG00000010225) #11	FXR2 (ENSTTRG00000010231) #13	SAT2 (ENSTTRG00000010238) #14	SHBG (ENSTTRG00000010243)	ATP1B2 (ENSTTRG00000010247) #15	TP53 (ENSTTRG00000010250) #16	WRAP53 (ENSTTRG00000010253) #17	EFNB3 (ENSTTRG00000010258)	DNAH2 (ENSTTRG00000010261)	KDM6B (ENSTTRG00000010285) #18	TMEM88 (ENSTTRG00000010291) #19	CYB5D1 (ENSTTRG00000010293) #21	CHD3 (ENSTTRG00000010295) #22	ENSTTRG00000010303	KCNAB3 (ENSTTRG00000010304) #24	TRAPPC1 (ENSTTRG00000010306) #25	CNTROB (ENSTTRG00000010307) #26	GUCY2D (ENSTTRG00000010309)	ALOX15B (ENSTTRG00000010310)	ALOXE3 (ENSTTRG00000010311) #29	HES7 (ENSTTRG00000010312) #30	PER1 (ENSTTRG00000010313)	VAMP2 (ENSTTRG00000010315) #32	TMEM107 (ENSTTRG00000010316) #33	AURKB (ENSTTRG00000010318) #35	ENSTTRG00000010319	CTC1 (ENSTTRG00000010320) #37
Sperm whale	MODERN SPECIES	27									WRAP53 (ENSPCTG00005021179) #17	EFNB3 (ENSPCTG00005021147)	DNAH2 (ENSPCTG00005020790)	KDM6B (ENSPCTG00005020760) #18	TMEM88 (ENSPCTG00005020739) #19	CYB5D1 (ENSPCTG00005020712) #21	NAA38 (ENSPCTG00005020631) #20	CHD3 (ENSPCTG00005020057) #22	KCNAB3 (ENSPCTG00005019809) #24	TRAPPC1 (ENSPCTG00005019757) #25	CNTROB (ENSPCTG00005019693) #26
Blue whale	MODERN SPECIES	12	SOX15 (ENSBMSG00010014575) #11	FXR2 (ENSBMSG00010014611) #13	SAT2 (ENSBMSG00010014690) #14	ENSBMSG00010014736	ENSBMSG00010014775	SHBG (ENSBMSG00010014909)	ATP1B2 (ENSBMSG00010015043) #15	TP53 (ENSBMSG00010015103) #16	WRAP53 (ENSBMSG00010015133) #17	EFNB3 (ENSBMSG00010015210)	DNAH2 (ENSBMSG00010015276)	KDM6B (ENSBMSG00010015645) #18	TMEM88 (ENSBMSG00010015664) #19	ENSBMSG00010015700 #20	CYB5D1 (ENSBMSG00010015944) #21	CHD3 (ENSBMSG00010015969) #22	RNF227 (ENSBMSG00010016286) #23	KCNAB3 (ENSBMSG00010016300) #24	TRAPPC1 (ENSBMSG00010016368) #25	CNTROB (ENSBMSG00010016399) #26	GUCY2D (ENSBMSG00010016445)	ALOX15B (ENSBMSG00010016565)	ALOXE3 (ENSBMSG00010017226) #29	HES7 (ENSBMSG00010017305) #30	PER1 (ENSBMSG00010017372)	VAMP2 (ENSBMSG00010017504) #32	TMEM107 (ENSBMSG00010017548) #33	BORCS6 (ENSBMSG00010017588) #34	ENSBMSG00010017600	ENSBMSG00010017629 #35	CTC1 (ENSBMSG00010017709) #37
Pecora	ANCESTRAL SPECIES	1	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Percora_a	ANCESTRAL SPECIES	2	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Bovidae	ANCESTRAL SPECIES	2	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Caprinae	ANCESTRAL SPECIES	1	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Rambouillet Sheep	MODERN SPECIES	2	CD68 (ENSOARG00020012774)	SOX15 (ENSOARG00020012722) #11	MPDU1 (ENSOARG00020012323) #12	FXR2 (ENSOARG00020012154) #13	SAT2 (ENSOARG00020012041) #14	SHBG (ENSOARG00020011830)	ATP1B2 (ENSOARG00020011738) #15	TP53 (ENSOARG00020011609) #16	WRAP53 (ENSOARG00020011477) #17	EFNB3 (ENSOARG00020011424)	DNAH2 (ENSOARG00020010512)	KDM6B (ENSOARG00020010242) #18	TMEM88 (ENSOARG00020010194) #19	NAA38 (ENSOARG00020010108) #20	CYB5D1 (ENSOARG00020009989) #21	CHD3 (ENSOARG00020023540) #22	RNF227 (ENSOARG00020023509) #23	KCNAB3 (ENSOARG00020023471) #24	TRAPPC1 (ENSOARG00020023446) #25	CNTROB (ENSOARG00020023412) #26	GUCY2D (ENSOARG00020023345)	ALOX15B (ENSOARG00020022867)	ALOX12B (ENSOARG00020022745) #28	ALOXE3 (ENSOARG00020022650) #29	HES7 (ENSOARG00020022603) #30	PER1 (ENSOARG00020022543)	VAMP2 (ENSOARG00020022474) #32	TMEM107 (ENSOARG00020022403) #33	BORCS6 (ENSOARG00020022391) #34	ENSOARG00020022372	AURKB (ENSOARG00020022344) #35
Goat	MODERN SPECIES	10	CD68 (ENSCHIG00000023275)	MPDU1 (ENSCHIG00000019131) #12	SOX15 (ENSCHIG00000023104) #11	FXR2 (ENSCHIG00000004007) #13	SHBG (ENSCHIG00000019887)	SAT2 (ENSCHIG00000008642) #14	ATP1B2 (ENSCHIG00000022273) #15	TP53 (ENSCHIG00000025000) #16	WRAP53 (ENSCHIG00000015730) #17	EFNB3 (ENSCHIG00000027243)	DNAH2 (ENSCHIG00000018276)	KDM6B (ENSCHIG00000017251) #18	TMEM88 (ENSCHIG00000017315) #19	NAA38 (ENSCHIG00000023618) #20	CYB5D1 (ENSCHIG00000012741) #21	CHD3 (ENSCHIG00000016737) #22	RNF227 (ENSCHIG00000009394) #23	KCNAB3 (ENSCHIG00000011995) #24	TRAPPC1 (ENSCHIG00000013736) #25	CNTROB (ENSCHIG00000023991) #26	GUCY2D (ENSCHIG00000014967)	ALOX15B (ENSCHIG00000018610)	ENSCHIG00000003074	ALOX12B (ENSCHIG00000022813) #28	ALOXE3 (ENSCHIG00000023588) #29	HES7 (ENSCHIG00000001918) #30	PER1 (ENSCHIG00000013197)	VAMP2 (ENSCHIG00000010440) #32	TMEM107 (ENSCHIG00000024916) #33	BORCS6 (ENSCHIG00000012299) #34	AURKB (ENSCHIG00000022907) #35
Bovinae	ANCESTRAL SPECIES		ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Bos	ANCESTRAL SPECIES	1	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Bos_a	ANCESTRAL SPECIES		ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000166612	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Domestic yak	MODERN SPECIES	10	CD68 (ENSBGRG00000015552)	MPDU1 (ENSBGRG00000015329) #12	SOX15 (ENSBGRG00000015270) #11	FXR2 (ENSBGRG00000014808) #13	SAT2 (ENSBGRG00000014643) #14	SHBG (ENSBGRG00000013830)	ATP1B2 (ENSBGRG00000013707) #15	TP53 (ENSBGRG00000013504) #16	WRAP53 (ENSBGRG00000013328) #17	EFNB3 (ENSBGRG00000013255)	DNAH2 (ENSBGRG00000011513)	KDM6B (ENSBGRG00000011083) #18	TMEM88 (ENSBGRG00000011023) #19	NAA38 (ENSBGRG00000010936) #20	CYB5D1 (ENSBGRG00000010801) #21	CHD3 (ENSBGRG00000026756) #22	KCNAB3 (ENSBGRG00000026751) #24	TRAPPC1 (ENSBGRG00000026750) #25	CNTROB (ENSBGRG00000026747) #26	GUCY2D (ENSBGRG00000026745)	ALOX15B (ENSBGRG00000026743)	ALOX12B (ENSBGRG00000026741) #28	ALOXE3 (ENSBGRG00000026739) #29	HES7 (ENSBGRG00000026738) #30	PER1 (ENSBGRG00000026736)	VAMP2 (ENSBGRG00000026734) #32	ENSBGRG00000026732	TMEM107 (ENSBGRG00000026730) #33	BORCS6 (ENSBGRG00000026729) #34	ENSBGRG00000026728	AURKB (ENSBGRG00000026727) #35
Wild yak	MODERN SPECIES	681													TMEM88 (ENSBMUG00000021910) #19	NAA38 (ENSBMUG00000021923) #20	CYB5D1 (ENSBMUG00000021950) #21	CHD3 (ENSBMUG00000021969) #22	ENSBMUG00000021991	KCNAB3 (ENSBMUG00000022002) #24	TRAPPC1 (ENSBMUG00000022035) #25	CNTROB (ENSBMUG00000022054) #26	GUCY2D (ENSBMUG00000022071)	ALOX15B (ENSBMUG00000022151)	ALOX12B (ENSBMUG00000022199) #28	ALOXE3 (ENSBMUG00000022215) #29	HES7 (ENSBMUG00000022232) #30	PER1 (ENSBMUG00000022265)	VAMP2 (ENSBMUG00000022296) #32	ENSBMUG00000022304	TMEM107 (ENSBMUG00000022335) #33	BORCS6 (ENSBMUG00000022350) #34	ENSBMUG00000022361
Bos_b	ANCESTRAL SPECIES	15	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Hybrid Bos Indicus	MODERN SPECIES	10	CD68 (ENSBIXG00005022432)	MPDU1 (ENSBIXG00005022416) #12	SOX15 (ENSBIXG00005022393) #11	FXR2 (ENSBIXG00005022344) #13	SAT2 (ENSBIXG00005022291) #14	SHBG (ENSBIXG00005022236)	ATP1B2 (ENSBIXG00005022109) #15	TP53 (ENSBIXG00005022080) #16	WRAP53 (ENSBIXG00005022042) #17	EFNB3 (ENSBIXG00005021928)	DNAH2 (ENSBIXG00005021869)	KDM6B (ENSBIXG00005020932) #18	TMEM88 (ENSBIXG00005020886) #19	CYB5D1 (ENSBIXG00005020864) #21	NAA38 (ENSBIXG00005003526) #20	CHD3 (ENSBIXG00005020807) #22	RNF227 (ENSBIXG00005020408) #23	KCNAB3 (ENSBIXG00005020380) #24	TRAPPC1 (ENSBIXG00005003419) #25	CNTROB (ENSBIXG00005007207) #26	GUCY2D (ENSBIXG00005003388)	ALOX15B (ENSBIXG00005003358)	ALOX12B (ENSBIXG00005020201) #28	ALOXE3 (ENSBIXG00005020178) #29	HES7 (ENSBIXG00005003310) #30	PER1 (ENSBIXG00005020118)	VAMP2 (ENSBIXG00005020076) #32	ENSBIXG00005020060	TMEM107 (ENSBIXG00005020040) #33	ENSBIXG00005020008	BORCS6 (ENSBIXG00005019998) #34
Cow	MODERN SPECIES	10	CD68 (ENSBTAG00000000133)	MPDU1 (ENSBTAG00000000134) #12	SOX15 (ENSBTAG00000005461) #11	FXR2 (ENSBTAG00000005462) #13	SAT2 (ENSBTAG00000004222) #14	SHBG (ENSBTAG00000004226)	ATP1B2 (ENSBTAG00000013680) #15	TP53 (ENSBTAG00000001069) #16	WRAP53 (ENSBTAG00000001071) #17	EFNB3 (ENSBTAG00000052025)	DNAH2 (ENSBTAG00000008605)	KDM6B (ENSBTAG00000048062) #18	TMEM88 (ENSBTAG00000014693) #19	NAA38 (ENSBTAG00000014695) #20	CYB5D1 (ENSBTAG00000051958) #21	CHD3 (ENSBTAG00000014377) #22	RNF227 (ENSBTAG00000051381) #23	KCNAB3 (ENSBTAG00000014940) #24	TRAPPC1 (ENSBTAG00000047214) #25	CNTROB (ENSBTAG00000047756) #26	GUCY2D (ENSBTAG00000008773)	ALOX15B (ENSBTAG00000008779)	ALOX12B (ENSBTAG00000012475) #28	ALOXE3 (ENSBTAG00000012478) #29	HES7 (ENSBTAG00000012436) #30	PER1 (ENSBTAG00000003889)	VAMP2 (ENSBTAG00000054934) #32	ENSBTAG00000053402	TMEM107 (ENSBTAG00000001702) #33	BORCS6 (ENSBTAG00000001711) #34	ENSBTAG00000049613
American bison	MODERN SPECIES	3101	EIF4A1 (ENSBBBG00000011799) ##9	CD68 (ENSBBBG00000011808)	MPDU1 (ENSBBBG00000011831) #12	SOX15 (ENSBBBG00000011837) #11	FXR2 (ENSBBBG00000011852) #13	SAT2 (ENSBBBG00000002207) #14	SHBG (ENSBBBG00000011965)	ATP1B2 (ENSBBBG00000011978) #15	TP53 (ENSBBBG00000012045) #16	WRAP53 (ENSBBBG00000012081) #17	EFNB3 (ENSBBBG00000001957)	DNAH2 (ENSBBBG00000012222)	TMEM88 (ENSBBBG00000012238) #19	NAA38 (ENSBBBG00000012243) #20	CYB5D1 (ENSBBBG00000012250) #21	CHD3 (ENSBBBG00000012374) #22	RNF227 (ENSBBBG00000012386) #23	KCNAB3 (ENSBBBG00000012395) #24	TRAPPC1 (ENSBBBG00000012401) #25	CNTROB (ENSBBBG00000001885) #26	ENSBBBG00000012428	ALOX15B (ENSBBBG00000002401)	ALOX12B (ENSBBBG00000012570) #28	ALOXE3 (ENSBBBG00000012589) #29	PER1 (ENSBBBG00000006876)	VAMP2 (ENSBBBG00000001829) #32	ENSBBBG00000012646	TMEM107 (ENSBBBG00000012658) #33	BORCS6 (ENSBBBG00000012667) #34	ENSBBBG00000002440	AURKB (ENSBBBG00000012684) #35
Siberian musk deer	MODERN SPECIES	186	CD68 (ENSMMSG00000019526)	MPDU1 (ENSMMSG00000019573) #12	SOX15 (ENSMMSG00000019596) #11	FXR2 (ENSMMSG00000019622) #13	SAT2 (ENSMMSG00000019706) #14	SHBG (ENSMMSG00000019755)	ATP1B2 (ENSMMSG00000019916) #15	TP53 (ENSMMSG00000019953) #16	WRAP53 (ENSMMSG00000014723) #17	EFNB3 (ENSMMSG00000014754)	DNAH2 (ENSMMSG00000014788)	KDM6B (ENSMMSG00000015220) #18	TMEM88 (ENSMMSG00000015296) #19	NAA38 (ENSMMSG00000015308) #20	CYB5D1 (ENSMMSG00000015342) #21	CHD3 (ENSMMSG00000015421) #22	RNF227 (ENSMMSG00000015787) #23	KCNAB3 (ENSMMSG00000015811) #24	TRAPPC1 (ENSMMSG00000015846) #25	CNTROB (ENSMMSG00000015879) #26	GUCY2D (ENSMMSG00000016038)	ALOX15B (ENSMMSG00000016126)	ALOX12B (ENSMMSG00000016252) #28	ALOXE3 (ENSMMSG00000016293) #29	ENSMMSG00000016356 #30	PER1 (ENSMMSG00000016416)	VAMP2 (ENSMMSG00000016555) #32	TMEM107 (ENSMMSG00000016636) #33	BORCS6 (ENSMMSG00000016688) #34	ENSMMSG00000016703	AURKB (ENSMMSG00000016737) #35
Yarkand deer	MODERN SPECIES	28	POLR2A (ENSCHYG00000008818)	ENSCHYG00000009243 #7	TNFSF13 (ENSCHYG00000009384) #8	SENP3 (ENSCHYG00000009975)	ENSCHYG00000010254	MPDU1 (ENSCHYG00000010340) #12	SOX15 (ENSCHYG00000010516) #11	FXR2 (ENSCHYG00000010582) #13	SAT2 (ENSCHYG00000010916) #14	SHBG (ENSCHYG00000011068)	ENSCHYG00000011360	ATP1B2 (ENSCHYG00000011403) #15	TP53 (ENSCHYG00000011475) #16	ENSCHYG00000011626	DNAH2 (ENSCHYG00000012149)	CHD3 (ENSCHYG00000012831) #22	KDM6B (ENSCHYG00000013585) #18	TMEM88 (ENSCHYG00000013718) #19	NAA38 (ENSCHYG00000013759) #20	CYB5D1 (ENSCHYG00000013871) #21	RNF227 (ENSCHYG00000013986) #23	KCNAB3 (ENSCHYG00000014047) #24	ENSCHYG00000014238 #25	ENSCHYG00000014305 #25	CNTROB (ENSCHYG00000014385) #26	GUCY2D (ENSCHYG00000014540)	ALOX15B (ENSCHYG00000014611)	ALOX12B (ENSCHYG00000014879) #28	ALOXE3 (ENSCHYG00000015030) #29	HES7 (ENSCHYG00000015299) #30	PER1 (ENSCHYG00000015413)
Camelidae	ANCESTRAL SPECIES	34	ENSGT00940000153889.e.b ##9	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00940000165567	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Arabian camel	MODERN SPECIES	7	EIF4A1 (ENSCDRG00005008099) ##9	ENSCDRG00005008276 #10	ENSCDRG00005008383 #12	SOX15 (ENSCDRG00005008731) #11	FXR2 (ENSCDRG00005008774) #13	ENSCDRG00005009131	ATP1B2 (ENSCDRG00005009178) #15	TP53 (ENSCDRG00005009237) #16	WRAP53 (ENSCDRG00005009419) #17	EFNB3 (ENSCDRG00005009608)	DNAH2 (ENSCDRG00005009679)	ENSCDRG00005010017 #18	TMEM88 (ENSCDRG00005010143) #19	NAA38 (ENSCDRG00005010184) #20	CYB5D1 (ENSCDRG00005010258) #21	CHD3 (ENSCDRG00005010391) #22	RNF227 (ENSCDRG00005011485) #23	KCNAB3 (ENSCDRG00005011520) #24	TRAPPC1 (ENSCDRG00005011640) #25	CNTROB (ENSCDRG00005011703) #26	ENSCDRG00005012365	ENSCDRG00005012420	ENSCDRG00005012579	GUCY2D (ENSCDRG00005012602)	ALOX15B (ENSCDRG00005012862)	ALOX12B (ENSCDRG00005013630) #28	ALOXE3 (ENSCDRG00005013774) #29	HES7 (ENSCDRG00005013805) #30	PER1 (ENSCDRG00005013843)	VAMP2 (ENSCDRG00005014155) #32	TMEM107 (ENSCDRG00005014274) #33
Alpaca	MODERN SPECIES	1885																ENSVPAG00000010794 #22	TRAPPC1 (ENSVPAG00000010796) #25	CNTROB (ENSVPAG00000010797) #26
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081
Chiroptera	ANCESTRAL SPECIES	29	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00860000135609	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081
Microchiroptera	ANCESTRAL SPECIES		ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00860000135609	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1356											ENSMLUG00000006411 #16	ENSMLUG00000028847	DNAH2 (ENSMLUG00000003331)	KDM6B (ENSMLUG00000014615) #18	TMEM88 (ENSMLUG00000025655) #19	ENSMLUG00000014643 #22	KCNAB3 (ENSMLUG00000014666) #24	TRAPPC1 (ENSMLUG00000014678) #25	CNTROB (ENSMLUG00000014681) #26	GUCY2D (ENSMLUG00000017406)	ALOX12B (ENSMLUG00000007945) #28	ALOXE3 (ENSMLUG00000007970) #29	HES7 (ENSMLUG00000008014) #30	PER1 (ENSMLUG00000003612)	TMEM107 (ENSMLUG00000003623) #33	BORCS6 (ENSMLUG00000003627) #34	AURKB (ENSMLUG00000003633) #35	CTC1 (ENSMLUG00000003639) #37	PFAS (ENSMLUG00000003646)	RANGRF (ENSMLUG00000003653)	SLC25A35 (ENSMLUG00000003656)
Microbat	MODERN SPECIES	1245				ENSMLUG00000023698	DNAJB14 (ENSMLUG00000003711)	LAMTOR3 (ENSMLUG00000006786)	DAPP1 (ENSMLUG00000006766)	C4orf54 (ENSMLUG00000024418)	MTTP (ENSMLUG00000011229)	TRMT10A (ENSMLUG00000011205)	C4orf17 (ENSMLUG00000011178)	ADH7 (ENSMLUG00000011160)	ENSMLUG00000022192	ENSMLUG00000026734	ENSMLUG00000029920	ENSMLUG00000003144 #22	ADH6 (ENSMLUG00000000050)	ENSMLUG00000027277	ENSMLUG00000030195	ADH5 (ENSMLUG00000002722)	METAP1 (ENSMLUG00000002718)	ENSMLUG00000005035	ENSMLUG00000023083	ENSMLUG00000028889	ENSMLUG00000000450
Greater horseshoe bat	MODERN SPECIES	13	CD68 (ENSRFEG00010012245)	MPDU1 (ENSRFEG00010012043) #12	SOX15 (ENSRFEG00010012003) #11	FXR2 (ENSRFEG00010011949) #13	SAT2 (ENSRFEG00010011849) #14	SHBG (ENSRFEG00010011569)	ATP1B2 (ENSRFEG00010011476) #15	TP53 (ENSRFEG00010011010) #16	WRAP53 (ENSRFEG00010010871) #17	EFNB3 (ENSRFEG00010010826)	ENSRFEG00010010696	KDM6B (ENSRFEG00010010342) #18	TMEM88 (ENSRFEG00010010263) #19	CYB5D1 (ENSRFEG00010010233) #21	NAA38 (ENSRFEG00010010129) #20	CHD3 (ENSRFEG00010009166) #22	RNF227 (ENSRFEG00010009035) #23	KCNAB3 (ENSRFEG00010008905) #24	ENSRFEG00010008853 #25	CNTROB (ENSRFEG00010008816) #26	ENSRFEG00010008762	GUCY2D (ENSRFEG00010008591)	ALOX12B (ENSRFEG00010008408) #28	ALOXE3 (ENSRFEG00010008260) #29	ENSRFEG00010008236	HES7 (ENSRFEG00010008189) #30	PER1 (ENSRFEG00010008074)	VAMP2 (ENSRFEG00010007957) #32	TMEM107 (ENSRFEG00010007808) #33	BORCS6 (ENSRFEG00010007784) #34	ENSRFEG00010007744
Megabat	MODERN SPECIES	1723	CD68 (ENSPVAG00000016300)	ENSPVAG00000016301	SOX15 (ENSPVAG00000016305) #11	FXR2 (ENSPVAG00000016306) #13	SAT2 (ENSPVAG00000016309) #14	SHBG (ENSPVAG00000016310)	ATP1B2 (ENSPVAG00000016314) #15	TP53 (ENSPVAG00000016317) #16	WRAP53 (ENSPVAG00000016324) #17	EFNB3 (ENSPVAG00000016328)	DNAH2 (ENSPVAG00000016329)	KDM6B (ENSPVAG00000016339) #18	ENSPVAG00000016341	NAA38 (ENSPVAG00000016342) #20	CYB5D1 (ENSPVAG00000016343) #21	CHD3 (ENSPVAG00000016344) #22	ENSPVAG00000016349	KCNAB3 (ENSPVAG00000016350) #24	TRAPPC1 (ENSPVAG00000016353) #25	CNTROB (ENSPVAG00000016354) #26	GUCY2D (ENSPVAG00000016355)	ENSPVAG00000016357	ALOX12B (ENSPVAG00000016362) #28	ENSPVAG00000016368	ALOXE3 (ENSPVAG00000016369) #29	HES7 (ENSPVAG00000016370) #30	PER1 (ENSPVAG00000016372)	VAMP2 (ENSPVAG00000016375) #32	TMEM107 (ENSPVAG00000016376) #33	AURKB (ENSPVAG00000016378) #35	ENSPVAG00000016379
Equus	ANCESTRAL SPECIES	31	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081
Horse	MODERN SPECIES	2	TNFSF13 (ENSECAG00000034840) #8	SENP3 (ENSECAG00000020871)	EIF4A1 (ENSECAG00000021478) ##9	CD68 (ENSECAG00000002186) #12	FXR2 (ENSECAG00000007051) #13	SAT2 (ENSECAG00000007716) #14	SHBG (ENSECAG00000046051)	ATP1B2 (ENSECAG00000007919) #15	TP53 (ENSECAG00000008126) #16	DNAH2 (ENSECAG00000008405)	EFNB3 (ENSECAG00000008360)	KDM6B (ENSECAG00000009828) #18	TMEM88 (ENSECAG00000009956) #19	NAA38 (ENSECAG00000051980) #20	RNF227 (ENSECAG00000052544) #23	CHD3 (ENSECAG00000010051) #22	KCNAB3 (ENSECAG00000011019) #24	TRAPPC1 (ENSECAG00000011346) #25	CNTROB (ENSECAG00000011460) #26	GUCY2D (ENSECAG00000011645)	ALOX15B (ENSECAG00000012112)	ALOX12B (ENSECAG00000012719) #28	ALOXE3 (ENSECAG00000012771) #29	HES7 (ENSECAG00000013278) #30	ENSECAG00000036668	PER1 (ENSECAG00000013291)	VAMP2 (ENSECAG00000014189) #32	TMEM107 (ENSECAG00000014324) #33	BORCS6 (ENSECAG00000003075) #34	ENSECAG00000035045	AURKB (ENSECAG00000014384) #35
Donkey	MODERN SPECIES	4	EIF4A1 (ENSEASG00005019235) ##9	CD68 (ENSEASG00005019285)	ENSEASG00005026250 #12	SOX15 (ENSEASG00005019300) #11	FXR2 (ENSEASG00005019301) #13	SAT2 (ENSEASG00005031940) #14	ATP1B2 (ENSEASG00005019306) #15	TP53 (ENSEASG00005019310) #16	WRAP53 (ENSEASG00005019313) #17	EFNB3 (ENSEASG00005029987)	DNAH2 (ENSEASG00005019325)	ENSEASG00005019348 #18	TMEM88 (ENSEASG00005019354) #19	CYB5D1 (ENSEASG00005031941) #21	ENSEASG00005036107 #20	CHD3 (ENSEASG00005019360) #22	RNF227 (ENSEASG00005019369) #23	KCNAB3 (ENSEASG00005019374) #24	TRAPPC1 (ENSEASG00005019386) #25	CNTROB (ENSEASG00005019398) #26	GUCY2D (ENSEASG00005019436)	ALOX15B (ENSEASG00005019446)	ALOX12B (ENSEASG00005019457) #28	ALOXE3 (ENSEASG00005019467) #29	ENSEASG00005019487	ENSEASG00005024043 #30	PER1 (ENSEASG00005019491)	VAMP2 (ENSEASG00005038676) #32	ENSEASG00005019505 #33	ENSEASG00005019508	BORCS6 (ENSEASG00005033955) #34
Carnivora	ANCESTRAL SPECIES	24	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Caniformia	ANCESTRAL SPECIES	27	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081
Caniformia_b	ANCESTRAL SPECIES	28	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34
Ursidae	ANCESTRAL SPECIES	31	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a.b #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Ursus	ANCESTRAL SPECIES	24	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a.b #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00860000135609	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00950000185081	ENSGT00490000043453 #34	ENSGT00940000158980 #35
American black bear	MODERN SPECIES	139										EFNB3 (ENSUAMG00000005422)	DNAH2 (ENSUAMG00000005427)	ENSUAMG00000005454 #18	TMEM88 (ENSUAMG00000005462) #19	NAA38 (ENSUAMG00000005463) #20	ENSUAMG00000005464 #21	CHD3 (ENSUAMG00000005475) #22
Giant Panda	MODERN SPECIES	8	MPDU1 (ENSAMEG00000016768) #12	SOX15 (ENSAMEG00000016773) #11	FXR2 (ENSAMEG00000016775) #13	SAT2 (ENSAMEG00000027590) #14	SHBG (ENSAMEG00000016816)	ATP1B2 (ENSAMEG00000016828) #15	TP53 (ENSAMEG00000016851) #16	WRAP53 (ENSAMEG00000016886) #17	ENSAMEG00000024256	ENSAMEG00000016900	DNAH2 (ENSAMEG00000016905)	ENSAMEG00000016978 #18	NAA38 (ENSAMEG00000028193) #20	TMEM88 (ENSAMEG00000030755) #19	CYB5D1 (ENSAMEG00000016997) #21	CHD3 (ENSAMEG00000003025) #22	KCNAB3 (ENSAMEG00000002995) #24	TRAPPC1 (ENSAMEG00000002987) #25	CNTROB (ENSAMEG00000002959) #26	GUCY2D (ENSAMEG00000002896)	ALOX15B (ENSAMEG00000002800)	ALOX12B (ENSAMEG00000002746) #28	ALOXE3 (ENSAMEG00000002712) #29	HES7 (ENSAMEG00000002709) #30	ENSAMEG00000027700	PER1 (ENSAMEG00000002633)	VAMP2 (ENSAMEG00000002632) #32	ENSAMEG00000028310 #33	BORCS6 (ENSAMEG00000031212) #34	ENSAMEG00000026409	AURKB (ENSAMEG00000002580) #35
Mustelinae	ANCESTRAL SPECIES	27	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00910000148083 #31	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Ferret	MODERN SPECIES	237	SOX15 (ENSMPUG00000009383) #11	FXR2 (ENSMPUG00000009051) #13	SAT2 (ENSMPUG00000009043) #14	SHBG (ENSMPUG00000009031)	ATP1B2 (ENSMPUG00000009026) #15	TP53 (ENSMPUG00000009017) #16	WRAP53 (ENSMPUG00000009013) #17	EFNB3 (ENSMPUG00000008984)	DNAH2 (ENSMPUG00000008919)	ENSMPUG00000019728	KDM6B (ENSMPUG00000008906) #18	ENSMPUG00000008900	NAA38 (ENSMPUG00000008886) #20	CYB5D1 (ENSMPUG00000008880) #21	ENSMPUG00000008872	CHD3 (ENSMPUG00000008861) #22	KCNAB3 (ENSMPUG00000008846) #24	TRAPPC1 (ENSMPUG00000008842) #25	CNTROB (ENSMPUG00000008833) #26	GUCY2D (ENSMPUG00000008642)	ALOX15B (ENSMPUG00000008246)	ALOX12B (ENSMPUG00000008234) #28	ALOXE3 (ENSMPUG00000008224) #29	HES7 (ENSMPUG00000008217) #30	PER1 (ENSMPUG00000008208)	VAMP2 (ENSMPUG00000008175) #32	TMEM107 (ENSMPUG00000008159) #33	BORCS6 (ENSMPUG00000019727) #34	AURKB (ENSMPUG00000008152) #35	CTC1 (ENSMPUG00000008131) #37	PFAS (ENSMPUG00000008102)
American mink	MODERN SPECIES	204	CD68 (ENSNVIG00000003734)	MPDU1 (ENSNVIG00000003764) #12	SOX15 (ENSNVIG00000003826) #11	FXR2 (ENSNVIG00000003843) #13	SAT2 (ENSNVIG00000003874) #14	SHBG (ENSNVIG00000003885)	ATP1B2 (ENSNVIG00000004107) #15	TP53 (ENSNVIG00000004120) #16	WRAP53 (ENSNVIG00000004147) #17	EFNB3 (ENSNVIG00000004177)	DNAH2 (ENSNVIG00000004198)	KDM6B (ENSNVIG00000004348) #18	TMEM88 (ENSNVIG00000004407) #19	NAA38 (ENSNVIG00000004415) #20	CYB5D1 (ENSNVIG00000004437) #21	CHD3 (ENSNVIG00000004454) #22	RNF227 (ENSNVIG00000004540) #23	KCNAB3 (ENSNVIG00000004551) #24	TRAPPC1 (ENSNVIG00000004612) #25	CNTROB (ENSNVIG00000004630) #26	GUCY2D (ENSNVIG00000004670)	ALOX15B (ENSNVIG00000004706)	ALOX12B (ENSNVIG00000004774) #28	ALOXE3 (ENSNVIG00000004828) #29	HES7 (ENSNVIG00000004851) #30	PER1 (ENSNVIG00000004866)	ENSNVIG00000004909 #31	VAMP2 (ENSNVIG00000004911) #32	TM107 (ENSNVIG00000004928) #33	BORCS6 (ENSNVIG00000004994) #34	ENSNVIG00000005006
Canidae	ANCESTRAL SPECIES	30	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943	ENSGT00940000158980 #35
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980.c #35
Dog	MODERN SPECIES	33	EIF4A1 (ENSCAFG00845023393) ##9	CD68 (ENSCAFG00845023581)	MPDU1 (ENSCAFG00845023654) #12	SOX15 (ENSCAFG00845023689) #11	FXR2 (ENSCAFG00845023779) #13	SHBG (ENSCAFG00845024117)	ATP1B2 (ENSCAFG00845024364) #15	TP53 (ENSCAFG00845024647) #16	WRAP53 (ENSCAFG00845024805) #17	EFNB3 (ENSCAFG00845024900)	DNAH2 (ENSCAFG00845025082)	KDM6B (ENSCAFG00845025737) #18	TMEM88 (ENSCAFG00845025982) #19	NAA38 (ENSCAFG00845026009) #20	CYB5D1 (ENSCAFG00845026052) #21	CHD3 (ENSCAFG00845026255) #22	RNF227 (ENSCAFG00845026680) #23	KCNAB3 (ENSCAFG00845026710) #24	TRAPPC1 (ENSCAFG00845026764) #25	CNTROB (ENSCAFG00845026847) #26	GUCY2D (ENSCAFG00845027102)	ALOX15B (ENSCAFG00845027303)	ALOX12B (ENSCAFG00845027528) #28	ALOXE3 (ENSCAFG00845027627) #29	HES7 (ENSCAFG00845027731) #30	PER1 (ENSCAFG00845027808)	VAMP2 (ENSCAFG00845028001) #32	TMEM107 (ENSCAFG00845028067) #33	BORCS6 (ENSCAFG00845028218) #34	ENSCAFG00845028250	ENSCAFG00845028264
Dingo	MODERN SPECIES	373	ENSCAFG00020007845 #10	MPDU1 (ENSCAFG00020007837) #12	SOX15 (ENSCAFG00020007832) #11	FXR2 (ENSCAFG00020007819) #13	SAT2 (ENSCAFG00020007745) #14	SHBG (ENSCAFG00020007727)	ATP1B2 (ENSCAFG00020007718) #15	TP53 (ENSCAFG00020007703) #16	ENSCAFG00020007694 #17	EFNB3 (ENSCAFG00020007689)	DNAH2 (ENSCAFG00020007540)	ENSCAFG00020007499 #18	TMEM88 (ENSCAFG00020007497) #19	NAA38 (ENSCAFG00020007495) #20	CYB5D1 (ENSCAFG00020007490) #21	CHD3 (ENSCAFG00020007422) #22	RNF227 (ENSCAFG00020007407) #23	KCNAB3 (ENSCAFG00020007397) #24	TRAPPC1 (ENSCAFG00020007393) #25	CNTROB (ENSCAFG00020007385) #26	GUCY2D (ENSCAFG00020007263)	ALOX15B (ENSCAFG00020007241)	ALOX12B (ENSCAFG00020007202) #28	HES7 (ENSCAFG00020007151) #30	PER1 (ENSCAFG00020007147)	VAMP2 (ENSCAFG00020007144) #32	TMEM107 (ENSCAFG00020007138) #33	ENSCAFG00020007133	BORCS6 (ENSCAFG00020007131) #34	ENSCAFG00020007090 #35	CTC1 (ENSCAFG00020007072) #37
Red fox	MODERN SPECIES	52	ENSVVUG00000027899 #10	ENSVVUG00000027902	MPDU1 (ENSVVUG00000027907) #12	SOX15 (ENSVVUG00000027913) #11	FXR2 (ENSVVUG00000027916) #13	SAT2 (ENSVVUG00000027919) #14	ENSVVUG00000027921	ATP1B2 (ENSVVUG00000027923) #15	TP53 (ENSVVUG00000027925) #16	WRAP53 (ENSVVUG00000027927) #17	EFNB3 (ENSVVUG00000027928)	DNAH2 (ENSVVUG00000027935)	KDM6B (ENSVVUG00000027979) #18	NAA38 (ENSVVUG00000028004) #20	CYB5D1 (ENSVVUG00000028007) #21	CHD3 (ENSVVUG00000028011) #22	ENSVVUG00000028036 #23	KCNAB3 (ENSVVUG00000028039) #24	TRAPPC1 (ENSVVUG00000028041) #25	CNTROB (ENSVVUG00000028051) #26	GUCY2D (ENSVVUG00000028064)	ALOX15B (ENSVVUG00000028072)	ALOX12B (ENSVVUG00000028078) #28	ALOXE3 (ENSVVUG00000028086) #29	HES7 (ENSVVUG00000028088) #30	PER1 (ENSVVUG00000028090)	VAMP2 (ENSVVUG00000028096) #32	TMEM107 (ENSVVUG00000028103) #33	BORCS6 (ENSVVUG00000028107) #34	ENSVVUG00000028108	AURKB (ENSVVUG00000028115) #35
Felidae	ANCESTRAL SPECIES	26	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00860000135609	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081
Panthera	ANCESTRAL SPECIES	25	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
Tiger	MODERN SPECIES	361	ENSPTIG00000020354	TNFSF13 (ENSPTIG00000016733) #8	SENP3 (ENSPTIG00000014579)	EIF4A1 (ENSPTIG00000012373) ##9	ENSPTIG00000011950	MPDU1 (ENSPTIG00000010234) #12	SOX15 (ENSPTIG00000009631) #11	FXR2 (ENSPTIG00000007284) #13	SAT2 (ENSPTIG00000005757) #14	ENSPTIG00000000999	ATP1B2 (ENSPTIG00000021917) #15	TP53 (ENSPTIG00000020802) #16	WRAP53 (ENSPTIG00000016810) #17	ENSPTIG00000018163	CYB5D1 (ENSPTIG00000017460) #21	ENSPTIG00000020407 #22	KCNAB3 (ENSPTIG00000018560) #24	TRAPPC1 (ENSPTIG00000017575) #25	ALOX15B (ENSPTIG00000005281)	ALOX12B (ENSPTIG00000019556) #28	ENSPTIG00000019249 #29
Panthera_a	ANCESTRAL SPECIES	28	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00950000185081	ENSGT00940000158980 #35
leopard	MODERN SPECIES	61	CD68 (ENSPPRG00000007544)	ENSPPRG00000007910 #12	ENSPPRG00000007983	ENSPPRG00000008597 #12	SOX15 (ENSPPRG00000008956) #11	ENSPPRG00000009200 #13	SAT2 (ENSPPRG00000010310) #14	ENSPPRG00000011621	ATP1B2 (ENSPPRG00000012349) #15	TP53 (ENSPPRG00000013238) #16	WRAP53 (ENSPPRG00000024366) #17	EFNB3 (ENSPPRG00000023443)	TMEM88 (ENSPPRG00000011304) #19	NAA38 (ENSPPRG00000012023) #20	ENSPPRG00000012321 #21	CHD3 (ENSPPRG00000000626) #22	KCNAB3 (ENSPPRG00000001895) #24	TRAPPC1 (ENSPPRG00000002295) #25	CNTROB (ENSPPRG00000006043) #26	GUCY2D (ENSPPRG00000006843)	ALOX15B (ENSPPRG00000010099)	ALOX12B (ENSPPRG00000010262) #28	ALOXE3 (ENSPPRG00000010559) #29	HES7 (ENSPPRG00000010937) #30	PER1 (ENSPPRG00000015627)	VAMP2 (ENSPPRG00000018019) #32	TMEM107 (ENSPPRG00000023143) #33	BORCS6 (ENSPPRG00000018720) #34	AURKB (ENSPPRG00000001075) #35	CTC1 (ENSPPRG00000002211) #37	PFAS (ENSPPRG00000003112)
lion	MODERN SPECIES	14	EIF4A1 (ENSPLOG00000020992) ##9	CD68 (ENSPLOG00000020939)	MPDU1 (ENSPLOG00000020871) #12	SOX15 (ENSPLOG00000020846) #11	FXR2 (ENSPLOG00000020769) #13	SHBG (ENSPLOG00000020477)	ATP1B2 (ENSPLOG00000020360) #15	TP53 (ENSPLOG00000020277) #16	WRAP53 (ENSPLOG00000020196) #17	EFNB3 (ENSPLOG00000020146)	DNAH2 (ENSPLOG00000019316)	KDM6B (ENSPLOG00000019177) #18	TMEM88 (ENSPLOG00000019141) #19	CYB5D1 (ENSPLOG00000019089) #21	NAA38 (ENSPLOG00000019033) #20	CHD3 (ENSPLOG00000018249) #22	RNF227 (ENSPLOG00000018192) #23	KCNAB3 (ENSPLOG00000018084) #24	TRAPPC1 (ENSPLOG00000018036) #25	CNTROB (ENSPLOG00000017443) #26	GUCY2D (ENSPLOG00000017220)	ALOX15B (ENSPLOG00000016744)	ALOX12B (ENSPLOG00000016576) #28	ALOXE3 (ENSPLOG00000016450) #29	HES7 (ENSPLOG00000016392) #30	PER1 (ENSPLOG00000016343)	VAMP2 (ENSPLOG00000016276) #32	TMEM107 (ENSPLOG00000016217) #33	BORCS6 (ENSPLOG00000016197) #34	ENSPLOG00000016179	AURKB (ENSPLOG00000016119) #35
Cat	MODERN SPECIES	245	CD68 (ENSFCAG00000035776)	MPDU1 (ENSFCAG00000009618) #12	SOX15 (ENSFCAG00000009619) #11	FXR2 (ENSFCAG00000009620) #13	SAT2 (ENSFCAG00000037847) #14	SHBG (ENSFCAG00000009621)	ATP1B2 (ENSFCAG00000009622) #15	TP53 (ENSFCAG00000009623) #16	WRAP53 (ENSFCAG00000009624) #17	EFNB3 (ENSFCAG00000040232)	DNAH2 (ENSFCAG00000009626)	KDM6B (ENSFCAG00000023668) #18	TMEM88 (ENSFCAG00000044355) #19	NAA38 (ENSFCAG00000026713) #20	CYB5D1 (ENSFCAG00000009628) #21	CHD3 (ENSFCAG00000009629) #22	RNF227 (ENSFCAG00000042971) #23	KCNAB3 (ENSFCAG00000009630) #24	TRAPPC1 (ENSFCAG00000029050) #25	CNTROB (ENSFCAG00000009631) #26	GUCY2D (ENSFCAG00000018062)	ALOX15B (ENSFCAG00000015182)	ALOX12B (ENSFCAG00000015184) #28	ALOXE3 (ENSFCAG00000015186) #29	PER1 (ENSFCAG00000015191)	HES7 (ENSFCAG00000015190) #30	ENSFCAG00000050357	VAMP2 (ENSFCAG00000010365) #32	TMEM107 (ENSFCAG00000035275) #33	BORCS6 (ENSFCAG00000043526) #34	AURKB (ENSFCAG00000028312) #35
Atlantogenata	ANCESTRAL SPECIES	37	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Xenarthra	ANCESTRAL SPECIES	389											ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000162032 #28
Sloth	MODERN SPECIES	5794																ENSCHOG00000013371 #22
Armadillo	MODERN SPECIES	1523											ENSDNOG00000037984	KDM6B (ENSDNOG00000006586) #18	TMEM88 (ENSDNOG00000006615) #19	NAA38 (ENSDNOG00000040664) #20	CYB5D1 (ENSDNOG00000039090) #21	CHD3 (ENSDNOG00000047846) #22	RNF227 (ENSDNOG00000043939) #23	KCNAB3 (ENSDNOG00000009889) #24	TRAPPC1 (ENSDNOG00000009918) #25	CNTROB (ENSDNOG00000009937) #26	GUCY2D (ENSDNOG00000005768)	ALOX12B (ENSDNOG00000049039) #28
Afrotheria	ANCESTRAL SPECIES	27	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000166612	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Afrotheria_a	ANCESTRAL SPECIES	27	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00940000162099 #11	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000166612	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Hyrax	MODERN SPECIES	5340																CHD3 (ENSPCAG00000004350) #22	ENSPCAG00000004576	KCNAB3 (ENSPCAG00000004590) #24	TRAPPC1 (ENSPCAG00000004678) #25	ENSPCAG00000004699 #26
Elephant	MODERN SPECIES	414	SENP3 (ENSLAFG00000028537)	EIF4A1 (ENSLAFG00000001107) ##9	CD68 (ENSLAFG00000001110)	MPDU1 (ENSLAFG00000001111) #12	FXR2 (ENSLAFG00000001114) #13	ENSLAFG00000029792	SHBG (ENSLAFG00000000994)	ATP1B2 (ENSLAFG00000023256) #15	ENSLAFG00000007483 #16	WRAP53 (ENSLAFG00000007488) #17	EFNB3 (ENSLAFG00000003839)	DNAH2 (ENSLAFG00000020681)	TMEM88 (ENSLAFG00000009168) #19	NAA38 (ENSLAFG00000009169) #20	CYB5D1 (ENSLAFG00000009171) #21	CHD3 (ENSLAFG00000000572) #22	KCNAB3 (ENSLAFG00000000527) #24	TRAPPC1 (ENSLAFG00000000530) #25	CNTROB (ENSLAFG00000002132) #26	GUCY2D (ENSLAFG00000006345)	ALOX15B (ENSLAFG00000001719)	ALOX12B (ENSLAFG00000020676) #28	ALOXE3 (ENSLAFG00000002324) #29	HES7 (ENSLAFG00000002331) #30	PER1 (ENSLAFG00000012222)	VAMP2 (ENSLAFG00000012232) #32	TMEM107 (ENSLAFG00000011967) #33	BORCS6 (ENSLAFG00000027264) #34	AURKB (ENSLAFG00000008390) #35	CTC1 (ENSLAFG00000026750) #37	PFAS (ENSLAFG00000012218)
Tenrec	MODERN SPECIES	6329																CHD3 (ENSETEG00000017733) #22	ENSETEG00000017746	KCNAB3 (ENSETEG00000017748) #24	CNTROB (ENSETEG00000017752) #26
Marsupialia	ANCESTRAL SPECIES	22	ENSGT00940000153889 #9	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00490000043453 #34	ENSGT00410000026943	ENSGT00940000158980 #35
Opossum	MODERN SPECIES	1	TNFSF12 (ENSMODG00000007036) #7	TNFSF13 (ENSMODG00000025682) #8	SENP3 (ENSMODG00000007067)	ENSMODG00000007090 #9	ENSMODG00000007113 #10	MPDU1 (ENSMODG00000044486) #12	FXR2 (ENSMODG00000007179) #13	SAT2 (ENSMODG00000007208) #14	ENSMODG00000040212	ATP1B2 (ENSMODG00000007264) #15	ENSMODG00000007363 #17	EFNB3 (ENSMODG00000044247)	DNAH2 (ENSMODG00000007423)	NAA38 (ENSMODG00000007434) #20	CYB5D1 (ENSMODG00000040030) #21	CHD3 (ENSMODG00000007509) #22	RNF227 (ENSMODG00000042746) #23	KCNAB3 (ENSMODG00000007554) #24	TRAPPC1 (ENSMODG00000007560) #25	CNTROB (ENSMODG00000007585) #26	GUCY2D (ENSMODG00000007621)	ALOX12B (ENSMODG00000007663) #28	ALOXE3 (ENSMODG00000007698) #29	HES7 (ENSMODG00000037945) #30	PER1 (ENSMODG00000007769)	VAMP2 (ENSMODG00000007792) #32	TMEM107 (ENSMODG00000042901) #33	BORCS6 (ENSMODG00000007798) #34	ENSMODG00000049472	AURKB (ENSMODG00000007829) #35	CTC1 (ENSMODG00000007871) #37
Marsupialia_b	ANCESTRAL SPECIES	25	ENSGT00940000153889 #9	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980 #35
Diprotodontia	ANCESTRAL SPECIES	38	ENSGT00940000153889 #9	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Diprotodontia_a	ANCESTRAL SPECIES	37	ENSGT00940000153889 #9	ENSGT00950000182899.C.b	ENSGT00940000153916.A #12	ENSGT00950000183189.a.a #13	ENSGT00950000183121.b.a #14	ENSGT00940000154035.a	ENSGT01030000234579.A.a #15	ENSGT00950000183153.c.a #16	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00390000002475 #23	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000162032 #28	ENSGT00940000156796 #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00940000158370 #32	ENSGT00390000014827 #33	ENSGT00410000026943	ENSGT00490000043453 #34	ENSGT00940000158980 #35	ENSGT00390000011553 #37
Common wonbat	MODERN SPECIES	746	EIF4A1 (ENSVURG00010003121) #9	ENSVURG00010003153 #10	MPDU1 (ENSVURG00010003164) #12	FXR2 (ENSVURG00010003184) #13	SAT2 (ENSVURG00010003204) #14	SHBG (ENSVURG00010003244)	ATP1B2 (ENSVURG00010003402) #15	TP53 (ENSVURG00010003410) #16	WRAP53 (ENSVURG00010003424) #17	EFNB3 (ENSVURG00010003454)	DNAH2 (ENSVURG00010003479)	KDM6B (ENSVURG00010003672) #18	TMEM88 (ENSVURG00010003737) #19	NAA38 (ENSVURG00010003740) #20	CYB5D1 (ENSVURG00010003753) #21	CHD3 (ENSVURG00010003787) #22	KCNAB3 (ENSVURG00010003835) #24	TRAPPC1 (ENSVURG00010003857) #25	CNTROB (ENSVURG00010003884) #26	GUCY2D (ENSVURG00010003895)	ENSVURG00010003930 #29	ALOX12B (ENSVURG00010003939) #28	ALOXE3 (ENSVURG00010003954) #29	VAMP2 (ENSVURG00010004002) #32	TMEM107 (ENSVURG00010004045) #33	ENSVURG00010004050 #34	ENSVURG00010004053	AURKB (ENSVURG00010004054) #35	CTC1 (ENSVURG00010004078) #37	SLC25A35 (ENSVURG00010004127)	ENSVURG00010004139
koala	MODERN SPECIES	167	EIF4A1 (ENSPCIG00000028856) #9	CD68 (ENSPCIG00000028977)	MPDU1 (ENSPCIG00000028978) #12	FXR2 (ENSPCIG00000028979) #13	SAT2 (ENSPCIG00000028983) #14	ENSPCIG00000028986	ATP1B2 (ENSPCIG00000028988) #15	TP53 (ENSPCIG00000028990) #16	WRAP53 (ENSPCIG00000004299) #17	EFNB3 (ENSPCIG00000004350)	DNAH2 (ENSPCIG00000004365)	KDM6B (ENSPCIG00000004435) #18	TMEM88 (ENSPCIG00000004477) #19	CYB5D1 (ENSPCIG00000004490) #21	ENSPCIG00000004483 #20	CHD3 (ENSPCIG00000005442) #22	RNF227 (ENSPCIG00000023784) #23	KCNAB3 (ENSPCIG00000023786) #24	TRAPPC1 (ENSPCIG00000023794) #25	CNTROB (ENSPCIG00000023797) #26	ENSPCIG00000023800	ENSPCIG00000023801	ALOX12B (ENSPCIG00000023803) #28	ALOXE3 (ENSPCIG00000023808) #29	HES7 (ENSPCIG00000023809) #30	PER1 (ENSPCIG00000023811)	VAMP2 (ENSPCIG00000023815) #32	TMEM107 (ENSPCIG00000023816) #33	ENSPCIG00000023821	ENSPCIG00000023820 #34	AURKB (ENSPCIG00000001437) #35
Wallaby	MODERN SPECIES	7848																CHD3 (ENSMEUG00000005852) #22
Tasmanian devil	MODERN SPECIES	3	EIF4A1 (ENSSHAG00000025908) #9	TNFSF12 (ENSSHAG00000026832) #7	SENP3 (ENSSHAG00000015773)	CD68 (ENSSHAG00000015749)	MPDU1 (ENSSHAG00000023388) #12	FXR2 (ENSSHAG00000015678) #13	SAT2 (ENSSHAG00000015589) #14	ATP1B2 (ENSSHAG00000015530) #15	TP53 (ENSSHAG00000015510) #16	WRAP53 (ENSSHAG00000015380) #17	EFNB3 (ENSSHAG00000015360)	KDM6B (ENSSHAG00000014694) #18	TMEM88 (ENSSHAG00000022675) #19	NAA38 (ENSSHAG00000028290) #20	CYB5D1 (ENSSHAG00000021645) #21	CHD3 (ENSSHAG00000014412) #22	RNF227 (ENSSHAG00000031131) #23	KCNAB3 (ENSSHAG00000027781) #24	TRAPPC1 (ENSSHAG00000022086) #25	CNTROB (ENSSHAG00000014180) #26	GUCY2D (ENSSHAG00000013941)	ALOX15B (ENSSHAG00000013773)	ALOX12B (ENSSHAG00000013703) #28	ALOXE3 (ENSSHAG00000013541) #29	HES7 (ENSSHAG00000022626) #30	PER1 (ENSSHAG00000013301)	VAMP2 (ENSSHAG00000013248) #32	TMEM107 (ENSSHAG00000027192) #33	ENSSHAG00000022089	BORCS6 (ENSSHAG00000021991) #34	ENSSHAG00000012795 #35
Platypus	DUPLICATION
Platypus	MODERN SPECIES	88	EIF4A1 (ENSOANG00000050686) #9	ENSOANG00000037792 #10	MPDU1 (ENSOANG00000042200) #12	ENSOANG00000048007 #11	FXR2 (ENSOANG00000036936) #13	SAT2 (ENSOANG00000048805) #14	ENSOANG00000038617	ATP1B2 (ENSOANG00000044182) #15	ENSOANG00000050103 #16	WRAP53 (ENSOANG00000008865) #17	EFNB3 (ENSOANG00000036033)	ENSOANG00000045211 #18	ENSOANG00000049653 #19	NAA38 (ENSOANG00000050971) #20	ENSOANG00000051342 #21	ENSOANG00000048406 #22	ENSOANG00000040863 #22	RNF227 (ENSOANG00000047566) #23	KCNAB3 (ENSOANG00000011684) #24	ENSOANG00000014378 #25	CNTROB (ENSOANG00000039082) #26	GUCY2D (ENSOANG00000045990)	ALOX15B (ENSOANG00000011906)	ENSOANG00000005037 #29	ALOX12B (ENSOANG00000005039) #28	ALOXE3 (ENSOANG00000038161) #29	HES7 (ENSOANG00000046244) #30	PER1 (ENSOANG00000040896)	VAMP2 (ENSOANG00000038970) #32	AURKB (ENSOANG00000038114) #35	TMEM107 (ENSOANG00000012349) #33
Platypus	MODERN SPECIES	88	ENSOANG00000037792 #10	MPDU1 (ENSOANG00000042200) #12	ENSOANG00000048007 #11	FXR2 (ENSOANG00000036936) #13	SAT2 (ENSOANG00000048805) #14	ENSOANG00000038617	ATP1B2 (ENSOANG00000044182) #15	ENSOANG00000050103 #16	WRAP53 (ENSOANG00000008865) #17	EFNB3 (ENSOANG00000036033)	ENSOANG00000045211 #18	ENSOANG00000049653 #19	NAA38 (ENSOANG00000050971) #20	ENSOANG00000051342 #21	ENSOANG00000048406 #22	ENSOANG00000040863 #22	RNF227 (ENSOANG00000047566) #23	KCNAB3 (ENSOANG00000011684) #24	ENSOANG00000014378 #25	CNTROB (ENSOANG00000039082) #26	GUCY2D (ENSOANG00000045990)	ALOX15B (ENSOANG00000011906)	ENSOANG00000005037 #29	ALOX12B (ENSOANG00000005039) #28	ALOXE3 (ENSOANG00000038161) #29	HES7 (ENSOANG00000046244) #30	PER1 (ENSOANG00000040896)	VAMP2 (ENSOANG00000038970) #32	AURKB (ENSOANG00000038114) #35	TMEM107 (ENSOANG00000012349) #33	RRS1 (ENSOANG00000012348)
Sauria	ANCESTRAL SPECIES	55	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000177834
Archelosauria	ANCESTRAL SPECIES	52	ENSGT00940000154035.a	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000177834
Cryptodira	ANCESTRAL SPECIES	60	ENSGT00940000154035.a	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000177834	ENSGT00940000159306 #24	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00990000210365	ENSGT00940000153761.A #25	ENSGT00980000199932
Testudinoidea	ANCESTRAL SPECIES	43	ENSGT00940000165258.d	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000156796.l.b.a #29	ENSGT00990000210365	ENSGT00940000153761.A #25	ENSGT00980000199932	ENSGT00940000156796.k.a.b #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00950000183193.A.c.a.e	ENSGT00940000161954.g
Emydidae	ANCESTRAL SPECIES	94						ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000157623	ENSGT00940000163221	ENSGT01000000221398	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00990000210365	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000156796.l.b.a #29	ENSGT00940000156796.k.a.b #29	ENSGT00940000159217
Three-toed box turtle	MODERN SPECIES	362	ENSTMTG00000020583	ENSTMTG00000020585	ENSTMTG00000020590	ENSTMTG00000020598	ENSTMTG00000020605	TP53 (ENSTMTG00000020609) #16	POLR2A (ENSTMTG00000020616)	ENSTMTG00000020634	TNFSF13 (ENSTMTG00000020639) #8	WRAP53 (ENSTMTG00000020667) #17	ENSTMTG00000020674	ENSTMTG00000012785	ENSTMTG00000012799	NAA38 (ENSTMTG00000012811) #20	CYB5D1 (ENSTMTG00000012819) #21	CHD3 (ENSTMTG00000012838) #22	KCNAB3 (ENSTMTG00000012926) #24	ENSTMTG00000012966	TRAPPC1 (ENSTMTG00000012977) #25	CNTROB (ENSTMTG00000012993) #26	ENSTMTG00000013095	ENSTMTG00000013118	ENSTMTG00000013141	ENSTMTG00000013153 #29	ENSTMTG00000013177 #29	ENSTMTG00000013294 #29	ENSTMTG00000013309 #29	ENSTMTG00000013340 #29	PER1 (ENSTMTG00000013559)	VAMP2 (ENSTMTG00000013628) #32	AURKB (ENSTMTG00000013648) #35
painted turtle	MODERN SPECIES	1068				ENSCPBG00000012973	POLR2A (ENSCPBG00000012697)	TNFSF12 (ENSCPBG00000012682) #7	WRAP53 (ENSCPBG00000012679) #17	ENSCPBG00000012678	CCT8L2 (ENSCPBG00000012677)	DNAH2 (ENSCPBG00000012668)	ENSCPBG00000012651	KDM6B (ENSCPBG00000012649) #18	ENSCPBG00000012647	NAA38 (ENSCPBG00000012645) #20	CYB5D1 (ENSCPBG00000012642) #21	CHD3 (ENSCPBG00000011966) #22	ENSCPBG00000011917	ENSCPBG00000011915	KCNAB3 (ENSCPBG00000011908) #24	TRAPPC1 (ENSCPBG00000011903) #25	ENSCPBG00000011901	ENSCPBG00000011899
Testudinidae	ANCESTRAL SPECIES	83							ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT01000000221398	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000156796.l.b.a #29	ENSGT00940000156796.k.a.b #29	ENSGT00730000111282 #30	ENSGT00940000159217	ENSGT00950000183193.A.c.a.e	ENSGT00940000161954.g
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	2334								TNFSF13 (ENSCABG00000010299) #8	WRAP53 (ENSCABG00000010305) #17	ENSCABG00000010385	CCT8L2 (ENSCABG00000010387)	ENSCABG00000010388	ENSCABG00000010392 #18	CYB5D1 (ENSCABG00000010395) #21	ENSCABG00000010396 #22	ENSCABG00000010400 #22	ENSCABG00000010401 #22	KCNAB3 (ENSCABG00000010402) #24	CNTROB (ENSCABG00000010412) #26	ENSCABG00000010417	ENSCABG00000010418	ENSCABG00000010419	ENSCABG00000010421 #29	ENSCABG00000010496 #29	PER1 (ENSCABG00000010939)	ENSCABG00000011393	AURKB (ENSCABG00000011407) #35	TMEM107 (ENSCABG00000011432) #33	ENSCABG00000011445 #29	ENSCABG00000011455 #29
Abingdon island giant tortoise	MODERN SPECIES	2334									TNFSF13 (ENSCABG00000010299) #8	WRAP53 (ENSCABG00000010305) #17	ENSCABG00000010385	CCT8L2 (ENSCABG00000010387)	ENSCABG00000010388	ENSCABG00000010392 #18	CYB5D1 (ENSCABG00000010395) #21	ENSCABG00000010396 #22	ENSCABG00000010400 #22	ENSCABG00000010401 #22	KCNAB3 (ENSCABG00000010402) #24	CNTROB (ENSCABG00000010412) #26	ENSCABG00000010417	ENSCABG00000010418	ENSCABG00000010419	ENSCABG00000010421 #29	ENSCABG00000010496 #29	PER1 (ENSCABG00000010939)	ENSCABG00000011393	AURKB (ENSCABG00000011407) #35	TMEM107 (ENSCABG00000011432) #33	ENSCABG00000011445 #29	ENSCABG00000011455 #29
Abingdon island giant tortoise	MODERN SPECIES	2334							TNFSF13 (ENSCABG00000010299) #8	WRAP53 (ENSCABG00000010305) #17	ENSCABG00000010385	CCT8L2 (ENSCABG00000010387)	ENSCABG00000010388	ENSCABG00000010392 #18	CYB5D1 (ENSCABG00000010395) #21	ENSCABG00000010396 #22	ENSCABG00000010400 #22	ENSCABG00000010401 #22	KCNAB3 (ENSCABG00000010402) #24	CNTROB (ENSCABG00000010412) #26	ENSCABG00000010417	ENSCABG00000010418	ENSCABG00000010419	ENSCABG00000010421 #29	ENSCABG00000010496 #29	PER1 (ENSCABG00000010939)	ENSCABG00000011393	AURKB (ENSCABG00000011407) #35	TMEM107 (ENSCABG00000011432) #33	ENSCABG00000011445 #29	ENSCABG00000011455 #29
Goode s thornscrub tortoise	MODERN SPECIES	155								WRAP53 (ENSGEVG00005016321) #17	EFNB3 (ENSGEVG00005016345)	CCT8L2 (ENSGEVG00005016392)	DNAH2 (ENSGEVG00005016465)	ENSGEVG00005017216	ENSGEVG00005017250	CYB5D1 (ENSGEVG00005017265) #21	ENSGEVG00005017287 #20	CHD3 (ENSGEVG00005017327) #22	ENSGEVG00005017428	ENSGEVG00005017460	KCNAB3 (ENSGEVG00005017478) #24	TRAPPC1 (ENSGEVG00005017518) #25	CNTROB (ENSGEVG00005017535) #26	ENSGEVG00005017558	ENSGEVG00005017614	ALOXE3 (ENSGEVG00005017660) #29	ENSGEVG00005017873 #29	HES7 (ENSGEVG00005018024) #30	PER1 (ENSGEVG00005018096)	VAMP2 (ENSGEVG00005018165) #32	ENSGEVG00005018180	ENSGEVG00005018198	ENSGEVG00005018220
Chinese turtle	MODERN SPECIES	532											ENSPSIG00000010530 #18	ENSPSIG00000010523	CYB5D1 (ENSPSIG00000010499) #21	ENSPSIG00000000350	ENSPSIG00000010427	CHD3 (ENSPSIG00000010177) #22	ENSPSIG00000010090	KCNAB3 (ENSPSIG00000009949) #24	TRAPPC1 (ENSPSIG00000009887) #25	CNTROB (ENSPSIG00000009723) #26	GUCY2D (ENSPSIG00000008359)	ALOXE3 (ENSPSIG00000007718) #29	TMEM107 (ENSPSIG00000007576) #33	AURKB (ENSPSIG00000006599) #35	VAMP2 (ENSPSIG00000006549) #32	PER1 (ENSPSIG00000005420)	ENSPSIG00000005390	ENSPSIG00000005272
Archosauria	ANCESTRAL SPECIES	94											ENSGT00940000158535	ENSGT00940000157956	ENSGT00940000153916.A #12	ENSGT00940000163250.A	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25
Aves	ANCESTRAL SPECIES	86											ENSGT00940000158535	ENSGT00940000157956	ENSGT00940000153916.A #12	ENSGT00940000163250.A	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00940000161326
African ostrich	MODERN SPECIES	559																ENSSCUG00000007559 #22
Neognathae	ANCESTRAL SPECIES	64											ENSGT00940000158535	ENSGT00940000157956	ENSGT00940000153916.A #12	ENSGT00940000163250.A	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00940000161326
Neognathae_b	ANCESTRAL SPECIES	65												ENSGT00940000158535	ENSGT00940000157956	ENSGT00940000153916.A #12	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00940000161326.f
Passeriformes	ANCESTRAL SPECIES	109													ENSGT00940000158535	ENSGT00940000157956	ENSGT00940000153916.A #12	ENSGT00940000158001 #22
Passeriformes_d	ANCESTRAL SPECIES	106													ENSGT00940000158535	ENSGT00940000157956	ENSGT00940000153916.A #12	ENSGT00940000158001 #22
Flycatcher	MODERN SPECIES	389															ENSFALG00000023297	ENSFALG00000028305 #22
Passeriformes_g	ANCESTRAL SPECIES	117													ENSGT00940000158535	ENSGT00940000157956	ENSGT00940000153916.A #12	ENSGT00940000158001 #22
Medium ground finch	MODERN SPECIES	436															ENSGFOG00000013459	CHD3 (ENSGFOG00000013468) #22	ENSGFOG00000013496	ENSGFOG00000013498	ENSGFOG00000013500
Passeroidea	ANCESTRAL SPECIES	124													ENSGT00940000158535	ENSGT00940000157956	ENSGT00940000153916.A #12	ENSGT00940000158001 #22
Zebra finch	DUPLICATION
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	74	ENSTGUG00000020530	ENSTGUG00000022683	ENSTGUG00000023932	ENSTGUG00000024991	PELP1 (ENSTGUG00000023283)	ENSTGUG00000019245	ENSTGUG00000019409	ENSTGUG00000024850	ENSTGUG00000027621	NAA38 (ENSTGUG00000027601) #20	ENSTGUG00000023837 #12	ENSTGUG00000024996	LAMTOR4 (ENSTGUG00000020045)	ENSTGUG00000027665	ENSTGUG00000023384 #18	ENSTGUG00000025549 #22	ENSTGUG00000025230 #22	ENSTGUG00000022578 #22	ENSTGUG00000024689 #22	ENSTGUG00000024651	ENSTGUG00000029003	ENSTGUG00000029302 #12	ENSTGUG00000026012	ENSTGUG00000025196	ENSTGUG00000020497	ENSTGUG00000022800	GABARAP (ENSTGUG00000026007)	ENSTGUG00000024918	ENSTGUG00000028509	ENSTGUG00000028822 #17	ENSTGUG00000026333
Zebra finch	MODERN SPECIES	74	ENSTGUG00000022683	ENSTGUG00000023932	ENSTGUG00000024991	PELP1 (ENSTGUG00000023283)	ENSTGUG00000019245	ENSTGUG00000019409	ENSTGUG00000024850	ENSTGUG00000027621	NAA38 (ENSTGUG00000027601) #20	ENSTGUG00000023837 #12	ENSTGUG00000024996	LAMTOR4 (ENSTGUG00000020045)	ENSTGUG00000027665	ENSTGUG00000023384 #18	ENSTGUG00000025549 #22	ENSTGUG00000025230 #22	ENSTGUG00000022578 #22	ENSTGUG00000024689 #22	ENSTGUG00000024651	ENSTGUG00000029003	ENSTGUG00000029302 #12	ENSTGUG00000026012	ENSTGUG00000025196	ENSTGUG00000020497	ENSTGUG00000022800	GABARAP (ENSTGUG00000026007)	ENSTGUG00000024918	ENSTGUG00000028509	ENSTGUG00000028822 #17	ENSTGUG00000026333	ENSTGUG00000021459
Zebra finch	MODERN SPECIES	74	ENSTGUG00000024991	PELP1 (ENSTGUG00000023283)	ENSTGUG00000019245	ENSTGUG00000019409	ENSTGUG00000024850	ENSTGUG00000027621	NAA38 (ENSTGUG00000027601) #20	ENSTGUG00000023837 #12	ENSTGUG00000024996	LAMTOR4 (ENSTGUG00000020045)	ENSTGUG00000027665	ENSTGUG00000023384 #18	ENSTGUG00000025549 #22	ENSTGUG00000025230 #22	ENSTGUG00000022578 #22	ENSTGUG00000024689 #22	ENSTGUG00000024651	ENSTGUG00000029003	ENSTGUG00000029302 #12	ENSTGUG00000026012	ENSTGUG00000025196	ENSTGUG00000020497	ENSTGUG00000022800	GABARAP (ENSTGUG00000026007)	ENSTGUG00000024918	ENSTGUG00000028509	ENSTGUG00000028822 #17	ENSTGUG00000026333	ENSTGUG00000021459	ENSTGUG00000020938	ENSTGUG00000027904
Zebra finch	MODERN SPECIES	74	ENSTGUG00000023932	ENSTGUG00000024991	PELP1 (ENSTGUG00000023283)	ENSTGUG00000019245	ENSTGUG00000019409	ENSTGUG00000024850	ENSTGUG00000027621	NAA38 (ENSTGUG00000027601) #20	ENSTGUG00000023837 #12	ENSTGUG00000024996	LAMTOR4 (ENSTGUG00000020045)	ENSTGUG00000027665	ENSTGUG00000023384 #18	ENSTGUG00000025549 #22	ENSTGUG00000025230 #22	ENSTGUG00000022578 #22	ENSTGUG00000024689 #22	ENSTGUG00000024651	ENSTGUG00000029003	ENSTGUG00000029302 #12	ENSTGUG00000026012	ENSTGUG00000025196	ENSTGUG00000020497	ENSTGUG00000022800	GABARAP (ENSTGUG00000026007)	ENSTGUG00000024918	ENSTGUG00000028509	ENSTGUG00000028822 #17	ENSTGUG00000026333	ENSTGUG00000021459	ENSTGUG00000020938
Neognathae_c	ANCESTRAL SPECIES	100															ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24
Golden eagle	MODERN SPECIES	74															ENSACCG00020012867 #21	CHD3 (ENSACCG00020013917) #22	ENSACCG00020014956
Kakapo	MODERN SPECIES	35																ENSSHBG00005006686 #22	ENSSHBG00005006668 #24	GRK1 (ENSSHBG00005006632)	ATP1B2 (ENSSHBG00005006609) #15	ENSSHBG00005006591 #16
Galloanserae	ANCESTRAL SPECIES																	ENSGT00940000158001 #22
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000158001 #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00940000158001 #22
Chicken	MODERN SPECIES	74																ENSGALG00010000141 #22
Anatidae	ANCESTRAL SPECIES																	ENSGT00940000158001 #22
Duck	DUPLICATION
Duck	MODERN SPECIES	4199																ENSAPLG00000025986 #22
Duck	MODERN SPECIES	655																ENSAPLG00000030056 #22
Lepidosauria	ANCESTRAL SPECIES	91	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00940000162021 #19	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00990000210365	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796.l #29	ENSGT00940000156796.k.a.a.b #29	ENSGT00940000156796.k.a.a.a #29	ENSGT00940000156796.k.a.b #29
tuatara	MODERN SPECIES	1221																CHD3 (ENSSPUG00000016808) #22	ENSSPUG00000016837	KCNAB3 (ENSSPUG00000016851) #24	TRAPPC1 (ENSSPUG00000016882) #25	ENSSPUG00000016888	ENSSPUG00000016898	ENSSPUG00000016903	ALOX15B (ENSSPUG00000016913)	ALOXE3 (ENSSPUG00000016977) #29	ENSSPUG00000017120 #29	ENSSPUG00000017124 #29	ENSSPUG00000017131 #29	ENSSPUG00000017184 #29	ENSSPUG00000017381 #29	TMEM107 (ENSSPUG00000017548) #33	AURKB (ENSSPUG00000017601) #35
Episquamata	ANCESTRAL SPECIES	20	ENSGT00940000154035.a	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00990000210365	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796.l #29	ENSGT00940000156796.k.a.a.b #29	ENSGT00940000156796.k.a.a.a #29	ENSGT00940000156796.k.a.b #29	ENSGT00940000155097	ENSGT00940000158195	ENSGT00940000153222.a.b.b.b.b	ENSGT00940000155501.b.k	ENSGT00390000018596.A.a.b
Toxicofera	ANCESTRAL SPECIES	30	ENSGT00940000165258	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796.l #29	ENSGT00940000156796.k.a.a.b #29	ENSGT00940000156796.k.a.a.a #29	ENSGT00940000156796.k.a.b #29	ENSGT00940000155097	ENSGT00940000158195	ENSGT00940000153222.a.b.b.b.b	ENSGT00940000155501.b.k	ENSGT00390000018596.A.a.b	ENSGT00390000004964
Lizard	MODERN SPECIES	1383											KDM6B (ENSACAG00000004490) #18	ENSACAG00000004482	NAA38 (ENSACAG00000004477) #20	CYB5D1 (ENSACAG00000004459) #21	ENSACAG00000034836	CHD3 (ENSACAG00000004276) #22	KCNAB3 (ENSACAG00000004127) #24
Elapidae	ANCESTRAL SPECIES	48	ENSGT01030000234579.A.a #15	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b.c	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796.l #29	ENSGT00940000156796.k.a.a.b #29	ENSGT00940000156796.k.a.a.a #29	ENSGT00940000156796.k.a.b #29	ENSGT00940000155097	ENSGT00940000164190.a.a
Indian cobra	MODERN SPECIES	337	ENSNNAG00000003616	ENSNNAG00000003597	ENSNNAG00000003578	MEPCE (ENSNNAG00000003560)	ENSNNAG00000003541 #13	MPDU1 (ENSNNAG00000003529) #12	ENSNNAG00000018064	EIF4A1 (ENSNNAG00000018056) #9	ENSNNAG00000018050	ENSNNAG00000018046	TMEM256 (ENSNNAG00000018041)	PPP1R35 (ENSNNAG00000018036)	ENSNNAG00000018031	NAA38 (ENSNNAG00000018028) #20	CYB5D1 (ENSNNAG00000018023) #21	CHD3 (ENSNNAG00000009480) #22	KCNAB3 (ENSNNAG00000008574) #24	ENSNNAG00000008551	TRAPPC1 (ENSNNAG00000008533) #25	ENSNNAG00000008515	GUCY2D (ENSNNAG00000008330)	ENSNNAG00000008177 #29	ALOXE3 (ENSNNAG00000007800) #29	ENSNNAG00000007752 #29	AURKB (ENSNNAG00000007690) #35	ENSNNAG00000007670	ENSNNAG00000007647	ENSNNAG00000007640	ENSNNAG00000007621	ENSNNAG00000007605	TAF9 (ENSNNAG00000007565)
Elapidae_a	ANCESTRAL SPECIES	112	ENSGT00950000183153.c.a #16	ENSGT01030000234579.A.a #15	ENSGT00940000165567	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000161488 #8	ENSGT00390000010169 #17	ENSGT00940000160323.b.c	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796.l #29	ENSGT00940000156796.k.a.a.b #29	ENSGT00940000156796.k.a.a.a #29	ENSGT00940000156796.k.a.b #29
Blue-lipped sea krait	MODERN SPECIES	4473													KDM6B (ENSLLTG00000012845) #18	NAA38 (ENSLLTG00000012840) #20	CYB5D1 (ENSLLTG00000012837) #21	CHD3 (ENSLLTG00000006984) #22
Acanthophiinae	ANCESTRAL SPECIES	145																ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000161510	ENSGT00940000156796.k.b #29	ENSGT00940000156796.l #29	ENSGT00940000156796.k.a.a.b #29	ENSGT00940000156796.k.a.a.a #29	ENSGT00940000156796.k.a.b #29
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	508															ENSNSUG00000011597 #22	ENSNSUG00000011598 #22	KCNAB3 (ENSNSUG00000011602) #24	TRAPPC1 (ENSNSUG00000011606) #25	ENSNSUG00000011607	ENSNSUG00000011610	ENSNSUG00000011611
Mainland tiger snake	MODERN SPECIES	508																ENSNSUG00000011597 #22	ENSNSUG00000011598 #22	KCNAB3 (ENSNSUG00000011602) #24	TRAPPC1 (ENSNSUG00000011606) #25	ENSNSUG00000011607	ENSNSUG00000011610	ENSNSUG00000011611
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	1521																ENSPTXG00000016086 #22
Eastern brown snake	MODERN SPECIES	807																ENSPTXG00000016946 #22
Laterata	ANCESTRAL SPECIES	26	ENSGT00940000154035.a	ENSGT00940000161268	ENSGT00940000153249.b.c	ENSGT00930000151033	ENSGT00940000163167 #7	ENSGT00940000161488 #8	ENSGT00950000183121.a.a.b ##14	ENSGT00390000010169 #17	ENSGT00940000160323.b	ENSGT00940000163221	ENSGT00940000157623	ENSGT00940000160414 #18	ENSGT00940000163776.a	ENSGT00390000018418 #20	ENSGT00440000037582 #21	ENSGT00940000158001 #22	ENSGT00940000159306 #24	ENSGT00990000210365	ENSGT00940000153761.A #25	ENSGT00610000086191 #26	ENSGT00940000161326	ENSGT00940000156796.k.b #29	ENSGT00940000156796.l #29	ENSGT00940000156796.k.a.a.b #29	ENSGT00940000156796.k.a.a.a #29	ENSGT00940000156796.k.a.b #29	ENSGT00730000111282 #30	ENSGT00940000165786	ENSGT00390000014827 #33	ENSGT00940000158980 #35	ENSGT00940000158370 #32
Argentine black and white tegu	MODERN SPECIES	38	ENSSMRG00000003239	ZBTB4 (ENSSMRG00000003240)	ENSSMRG00000003241	POLR2A (ENSSMRG00000003243)	TNFSF12 (ENSSMRG00000003244) #7	TNFSF13 (ENSSMRG00000003245) #8	ENSSMRG00000003246 ##14	WRAP53 (ENSSMRG00000003247) #17	ENSSMRG00000003249	CCT8L2 (ENSSMRG00000003258)	DNAH2 (ENSSMRG00000003309)	KDM6B (ENSSMRG00000003364) #18	ENSSMRG00000003390	NAA38 (ENSSMRG00000003392) #20	CYB5D1 (ENSSMRG00000003395) #21	CHD3 (ENSSMRG00000003399) #22	KCNAB3 (ENSSMRG00000003464) #24	TRAPPC1 (ENSSMRG00000003483) #25	CNTROB (ENSSMRG00000003488) #26	ENSSMRG00000003504	ENSSMRG00000003506 #29	ENSSMRG00000003519 #29	ENSSMRG00000003524 #29	ENSSMRG00000003672 #29	ENSSMRG00000003674 #29	ENSSMRG00000003683	HES7 (ENSSMRG00000003687) #30	ENSSMRG00000003690	TMEM107 (ENSSMRG00000003702) #33	AURKB (ENSSMRG00000003714) #35	VAMP2 (ENSSMRG00000003721) #32
Common wall lizard	MODERN SPECIES	4	ENSPMRG00000011735	ZBTB4 (ENSPMRG00000011733)	ENSPMRG00000011729	POLR2A (ENSPMRG00000011711)	ENSPMRG00000011691 #7	ENSPMRG00000011683 ##14	ENSPMRG00000011678	WRAP53 (ENSPMRG00000011669) #17	EFNB3 (ENSPMRG00000022630)	CCT8L2 (ENSPMRG00000022625)	DNAH2 (ENSPMRG00000022541)	ENSPMRG00000022506	ENSPMRG00000022499	NAA38 (ENSPMRG00000022495) #20	CYB5D1 (ENSPMRG00000022487) #21	CHD3 (ENSPMRG00000021835) #22	ENSPMRG00000021721	KCNAB3 (ENSPMRG00000021713) #24	ENSPMRG00000021705	TRAPPC1 (ENSPMRG00000021699) #25	ENSPMRG00000021695	CNTROB (ENSPMRG00000021674) #26	ENSPMRG00000021663	ENSPMRG00000021653 #29	ALOXE3 (ENSPMRG00000021620) #29	ENSPMRG00000021603 #29	ENSPMRG00000021507 #29	ENSPMRG00000021461 #29	ENSPMRG00000021451	TMEM107 (ENSPMRG00000021421) #33	AURKB (ENSPMRG00000021404) #35