Amniota	ANCESTRAL SPECIES	4	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00990000204039	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430
Mammalia	ANCESTRAL SPECIES	24	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430
Theria	ANCESTRAL SPECIES	30	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Eutheria	ANCESTRAL SPECIES	7	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Primates	ANCESTRAL SPECIES	9	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00390000009819.a.b.a.a.b.a.j	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b.i	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00950000182920.b.a.b.a.b.i	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00390000003582.e.d.b #25	ENSGT00390000002626.d #26	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110
Hominoidea	ANCESTRAL SPECIES	23	ENSGT00950000182920.b.a.b.a.b.i	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706.o #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00390000003582.e.d.b #25	ENSGT00390000002626.d #26	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185
Hominidae	ANCESTRAL SPECIES	10	ENSGT00950000182920.b.a.b.a.b.i	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706.o #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00390000003582.e.d.b #25	ENSGT00390000002626.d #26	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970.n.a #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00950000182920.b.a.b.a.b.i	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706.o #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00390000003582.e.d.b #25	ENSGT00390000002626.d #26	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343.a #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970.n.a #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185
Homo/Pan group	ANCESTRAL SPECIES	27	ENSGT00950000182920.b.a.b.a.b.i	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706.o #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00390000003582.e.d.b #25	ENSGT00390000002626.d #26	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343.a #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970.n.a #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185
Pan	ANCESTRAL SPECIES	26	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154429.r #8	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706.o #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000154706.p #19	ENSGT00940000153201.j.k.a.a.a.a #20	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00390000003582.e.d.b #25	ENSGT00390000002626.d #26	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343.a #32	ENSGT00390000018145.cb.a.a.b #33	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970.n.a #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110
Chimpanzee	MODERN SPECIES	22	SAXO1 (ENSPTRG00000020796) #7	ENSPTRG00000050598 #8	ADAMTSL1 (ENSPTRG00000020794) #9	SH3GL2 (ENSPTRG00000020792) #10	CNTLN (ENSPTRG00000020791) #11	BNC2 (ENSPTRG00000020789) #12	LINC03041 (ENSPTRG00000029336) #13	CCDC171 (ENSPTRG00000020787) #14	ENSPTRG00000050939 #15	PSIP1 (ENSPTRG00000020786) #16	SNAPC3 (ENSPTRG00000020785) #17	TTC39B (ENSPTRG00000020784) #18	ENSPTRG00000049865 #19	ENSPTRG00000050528 #20	FREM1 (ENSPTRG00000020782) #21	CER1 (ENSPTRG00000020781) #22	ZDHHC21 (ENSPTRG00000020779) #23	NFIB (ENSPTRG00000020777) #24	ENSPTRG00000039179 #25	ENSPTRG00000045557 #26	MPDZ (ENSPTRG00000020776) #27	ENSPTRG00000044336 #28	LURAP1L (ENSPTRG00000020775) #29	TYRP1 (ENSPTRG00000020774) #30	PTPRD (ENSPTRG00000020773) #31	DMAC1 (ENSPTRG00000049902) #32	ENSPTRG00000039806 #33	ENSPTRG00000034071 #34	KDM4C (ENSPTRG00000023432) #35	ENSPTRG00000045078 #36	GLDC (ENSPTRG00000029347) #37
Bonobo	MODERN SPECIES	22	RRAGA (ENSPPAG00000012463)	ENSPPAG00000036876	SAXO1 (ENSPPAG00000031728) #7	ENSPPAG00000024728 #8	ADAMTSL1 (ENSPPAG00000042232) #9	SH3GL2 (ENSPPAG00000020499) #10	CNTLN (ENSPPAG00000005881) #11	BNC2 (ENSPPAG00000037205) #12	CCDC171 (ENSPPAG00000042501) #14	PSIP1 (ENSPPAG00000030461) #16	SNAPC3 (ENSPPAG00000015962) #17	TTC39B (ENSPPAG00000029769) #18	ENSPPAG00000030164 #19	ENSPPAG00000033450 #20	FREM1 (ENSPPAG00000034460) #21	CER1 (ENSPPAG00000038199) #22	ZDHHC21 (ENSPPAG00000038407) #23	ENSPPAG00000030129 #24	ENSPPAG00000008881 #24	MPDZ (ENSPPAG00000028619) #27	ENSPPAG00000036271 #28	LURAP1L (ENSPPAG00000031027) #29	TYRP1 (ENSPPAG00000032608) #30	ENSPPAG00000016213	PTPRD (ENSPPAG00000032905) #31	DMAC1 (ENSPPAG00000040685) #32	ENSPPAG00000030064 #33	KDM4C (ENSPPAG00000042410) #35	ENSPPAG00000026658 ##34	ENSPPAG00000042614 #36	ENSPPAG00000024827
Human	MODERN SPECIES	21	RPS6 (ENSG00000137154)	DENND4C (ENSG00000137145)	PLIN2 (ENSG00000147872)	HAUS6 (ENSG00000147874)	RRAGA (ENSG00000155876)	SAXO1 (ENSG00000155875) #7	ADAMTSL1 (ENSG00000178031) #9	SH3GL2 (ENSG00000107295) #10	CNTLN (ENSG00000044459) #11	BNC2 (ENSG00000173068) #12	CCDC171 (ENSG00000164989) #14	PSIP1 (ENSG00000164985) #16	SNAPC3 (ENSG00000164975) #17	TTC39B (ENSG00000155158) #18	FREM1 (ENSG00000164946) #21	CER1 (ENSG00000147869) #22	ZDHHC21 (ENSG00000175893) #23	NFIB (ENSG00000147862) #24	MPDZ (ENSG00000107186) #27	LURAP1L (ENSG00000153714) #29	TYRP1 (ENSG00000107165) #30	PTPRD (ENSG00000153707) #31	DMAC1 (ENSG00000137038) #32	KDM4C (ENSG00000107077) #35	GLDC (ENSG00000178445) #37	UHRF2 (ENSG00000147854)	TPD52L3 (ENSG00000170777)	IL33 (ENSG00000137033)	RANBP6 (ENSG00000137040)	MLANA (ENSG00000120215)	KIAA2026 (ENSG00000183354)
Gorilla	MODERN SPECIES	22	ENSGGOG00000040154 #8	SH3GL2 (ENSGGOG00000007684) #10	CNTLN (ENSGGOG00000025720) #11	ENSGGOG00000043261	BNC2 (ENSGGOG00000004532) #12	ENSGGOG00000003264 #13	CCDC171 (ENSGGOG00000012017) #14	ENSGGOG00000027119 ##15	PSIP1 (ENSGGOG00000016152) #16	SNAPC3 (ENSGGOG00000006757) #17	TTC39B (ENSGGOG00000005786) #18	ENSGGOG00000012170	ENSGGOG00000042433 #20	ENSGGOG00000038071 #20	FREM1 (ENSGGOG00000014708) #21	CER1 (ENSGGOG00000001552) #22	ZDHHC21 (ENSGGOG00000022090) #23	NFIB (ENSGGOG00000022134) #24	ENSGGOG00000028472 #26	MPDZ (ENSGGOG00000005514) #27	ENSGGOG00000022145 #28	LURAP1L (ENSGGOG00000002038) #29	TYRP1 (ENSGGOG00000016261) #30	PTPRD (ENSGGOG00000016241) #31	ENSGGOG00000039445	DMAC1 (ENSGGOG00000025305) #32	KDM4C (ENSGGOG00000000506) #35	ENSGGOG00000028250	GLDC (ENSGGOG00000004507) #37	UHRF2 (ENSGGOG00000008853)	TPD52L3 (ENSGGOG00000042302)
Orangutan	MODERN SPECIES	22	ENSPPYG00000033603	HAUS6 (ENSPPYG00000036018)	RRAGA (ENSPPYG00000019196)	SAXO1 (ENSPPYG00000019197) #7	ADAMTSL1 (ENSPPYG00000019199) #9	SH3GL2 (ENSPPYG00000040517) #10	CNTLN (ENSPPYG00000019201) #11	BNC2 (ENSPPYG00000019203) #12	ENSPPYG00000019204 #13	CCDC171 (ENSPPYG00000019205) #14	PSIP1 (ENSPPYG00000019206) #16	SNAPC3 (ENSPPYG00000019207) #17	TTC39B (ENSPPYG00000019208) #18	ENSPPYG00000034152 ##20	FREM1 (ENSPPYG00000019211) #21	CER1 (ENSPPYG00000019212) #22	ZDHHC21 (ENSPPYG00000019213) #23	NFIB (ENSPPYG00000019214) #24	MPDZ (ENSPPYG00000019216) #27	ENSPPYG00000039071 #28	LURAP1L (ENSPPYG00000019218) #29	TYRP1 (ENSPPYG00000019219) #30	PTPRD (ENSPPYG00000019220) #31	DMAC1 (ENSPPYG00000019221) #32	KDM4C (ENSPPYG00000019222) #35	GLDC (ENSPPYG00000019225) #37	UHRF2 (ENSPPYG00000019227)	TPD52L3 (ENSPPYG00000019229)	IL33 (ENSPPYG00000019231)	ENSPPYG00000032896	KIAA2026 (ENSPPYG00000029402)
Gibbon	MODERN SPECIES	10	ADAMTSL1 (ENSNLEG00000017561) #9	ENSNLEG00000031500	ENSNLEG00000033664	SH3GL2 (ENSNLEG00000017566) #10	CNTLN (ENSNLEG00000017575) #11	BNC2 (ENSNLEG00000017578) #12	ENSNLEG00000017580 #13	CCDC171 (ENSNLEG00000017581) #14	ENSNLEG00000032210 ##15	PSIP1 (ENSNLEG00000017585) #16	SNAPC3 (ENSNLEG00000017591) #17	TTC39B (ENSNLEG00000017600) #18	ENSNLEG00000033891	ENSNLEG00000031209 #20	FREM1 (ENSNLEG00000017613) #21	CER1 (ENSNLEG00000031098) #22	ZDHHC21 (ENSNLEG00000017622) #23	NFIB (ENSNLEG00000017626) #24	MPDZ (ENSNLEG00000017632) #27	ENSNLEG00000032253 #28	LURAP1L (ENSNLEG00000017661) #29	TYRP1 (ENSNLEG00000017662) #30	ENSNLEG00000034539	PTPRD (ENSNLEG00000017664) #31	ENSNLEG00000028620	ENSNLEG00000027866	KDM4C (ENSNLEG00000017670) #35	ENSNLEG00000018987	ENSNLEG00000032646 #36	ENSNLEG00000030924	GLDC (ENSNLEG00000009146) #37
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT01100000266431	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00390000003582.e.d.b #25	ENSGT00390000002626.d #26	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT01100000266431	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT01100000266431	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00950000183010.a.a.a.b.a.a.b.a.b	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185
Macaca	ANCESTRAL SPECIES	10	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT01100000266431	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00950000183010.a.a.a.b.a.a.b.a.b	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000141074.f.b	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767
Pig-tailed macaque	MODERN SPECIES	152	RRAGA (ENSMNEG00000019531)	SAXO1 (ENSMNEG00000033883) #7	ENSMNEG00000044073	ADAMTSL1 (ENSMNEG00000039848) #9	ENSMNEG00000042732 #8	SH3GL2 (ENSMNEG00000032599) #10	CNTLN (ENSMNEG00000040917) #11	BNC2 (ENSMNEG00000040884) #12	ENSMNEG00000043142 #13	CCDC171 (ENSMNEG00000042615) #14	PSIP1 (ENSMNEG00000030633) #16	ENSMNEG00000014509	SNAPC3 (ENSMNEG00000002686) #17	TTC39B (ENSMNEG00000029192) #18	FREM1 (ENSMNEG00000034773) #21	CER1 (ENSMNEG00000034249) #22	ZDHHC21 (ENSMNEG00000033895) #23	ENSMNEG00000005084	NFIB (ENSMNEG00000039065) #24	ENSMNEG00000035388 #25	MPDZ (ENSMNEG00000040228) #27	ENSMNEG00000035930 #28	LURAP1L (ENSMNEG00000029041) #29	TYRP1 (ENSMNEG00000035543) #30	ENSMNEG00000036773	PTPRD (ENSMNEG00000036506) #31	ENSMNEG00000030132	DMAC1 (ENSMNEG00000044495) #32	KDM4C (ENSMNEG00000029324) #35	ENSMNEG00000031093	ENSMNEG00000033793 #36
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b.i	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00950000183010.a.a.a.b.a.a.b.a.b	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000141074.f.b	ENSGT00390000003343 #32	ENSGT00390000009328.c.a	ENSGT00390000002127.sb	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110
Rhesus	MODERN SPECIES	6	HAUS6 (ENSMMUG00000018396)	RRAGA (ENSMMUG00000018395)	SAXO1 (ENSMMUG00000018394) #7	ADAMTSL1 (ENSMMUG00000044658) #9	SH3GL2 (ENSMMUG00000011704) #10	ENSMMUG00000053129	CNTLN (ENSMMUG00000023448) #11	BNC2 (ENSMMUG00000001141) #12	ENSMMUG00000044363 #13	CCDC171 (ENSMMUG00000016731) #14	ENSMMUG00000058883	PSIP1 (ENSMMUG00000002224) #16	SNAPC3 (ENSMMUG00000016189) #17	TTC39B (ENSMMUG00000013466) #18	FREM1 (ENSMMUG00000008128) #21	CER1 (ENSMMUG00000012428) #22	ZDHHC21 (ENSMMUG00000012426) #23	ENSMMUG00000056734	NFIB (ENSMMUG00000014697) #24	MPDZ (ENSMMUG00000019388) #27	LURAP1L (ENSMMUG00000013290) #29	TYRP1 (ENSMMUG00000062815) #30	ENSMMUG00000058123	ENSMMUG00000056551	ENSMMUG00000049668	ENSMMUG00000065258	ENSMMUG00000061442	ENSMMUG00000055769	ENSMMUG00000057534	PTPRD (ENSMMUG00000006952) #31	ENSMMUG00000019570
Crab-eating macaque	MODERN SPECIES	6	PLIN2 (ENSMFAG00000041970)	HAUS6 (ENSMFAG00000000635)	RRAGA (ENSMFAG00000030433)	SAXO1 (ENSMFAG00000000158) #7	ADAMTSL1 (ENSMFAG00000042640) #9	SH3GL2 (ENSMFAG00000043791) #10	CNTLN (ENSMFAG00000038531) #11	BNC2 (ENSMFAG00000036895) #12	ENSMFAG00000036515 #13	CCDC171 (ENSMFAG00000007272) #14	PSIP1 (ENSMFAG00000045606) #16	SNAPC3 (ENSMFAG00000039519) #17	TTC39B (ENSMFAG00000002246) #18	ENSMFAG00000059525	FREM1 (ENSMFAG00000002956) #21	CER1 (ENSMFAG00000037928) #22	ENSMFAG00000030041	ZDHHC21 (ENSMFAG00000038466) #23	NFIB (ENSMFAG00000037052) #24	MPDZ (ENSMFAG00000032679) #27	ENSMFAG00000057135	LURAP1L (ENSMFAG00000040734) #29	TYRP1 (ENSMFAG00000046179) #30	ENSMFAG00000062292	ENSMFAG00000028377	ENSMFAG00000049672	ENSMFAG00000049031	PTPRD (ENSMFAG00000031323) #31	ENSMFAG00000044606	DMAC1 (ENSMFAG00000044806) #32	ENSMFAG00000014434
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00950000182920.b.a.b.a.b.j.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00950000183010.a.a.a.b.a.a.b.a.b	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185
Olive baboon	MODERN SPECIES	4	ADAMTSL1 (ENSPANG00000025231) #9	SH3GL2 (ENSPANG00000025232) #10	ENSPANG00000046683	CNTLN (ENSPANG00000025233) #11	ENSPANG00000049593	ENSPANG00000045248	BNC2 (ENSPANG00000025234) #12	ENSPANG00000025235 #13	CCDC171 (ENSPANG00000025236) #14	ENSPANG00000041882	PSIP1 (ENSPANG00000025230) #16	SNAPC3 (ENSPANG00000025229) #17	ENSPANG00000047398	ENSPANG00000038536 #18	FREM1 (ENSPANG00000025228) #21	CER1 (ENSPANG00000025225) #22	ENSPANG00000031770	ZDHHC21 (ENSPANG00000042206) #23	NFIB (ENSPANG00000025203) #24	MPDZ (ENSPANG00000025205) #27	LURAP1L (ENSPANG00000025206) #29	TYRP1 (ENSPANG00000025207) #30	ENSPANG00000040619	ENSPANG00000017355	ENSPANG00000050311	ENSPANG00000048068	ENSPANG00000039593	ENSPANG00000046642	PTPRD (ENSPANG00000025208) #31	DMAC1 (ENSPANG00000025209) #32	ENSPANG00000034870
Cercopithecinae_d	ANCESTRAL SPECIES	34	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT01020000230346.E.s.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT01100000266120	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00950000183010.a.a.a.b.a.a.b.a.b	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000154499.h #36	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185
Drill	MODERN SPECIES	1051								BNC2 (ENSMLEG00000010467) #12	ENSMLEG00000029849 #13	CCDC171 (ENSMLEG00000037661) #14	PSIP1 (ENSMLEG00000001440) #16	ENSMLEG00000027945	SNAPC3 (ENSMLEG00000030316) #17	TTC39B (ENSMLEG00000041037) #18	FREM1 (ENSMLEG00000039451) #21	CER1 (ENSMLEG00000041007) #22	ENSMLEG00000027784	ZDHHC21 (ENSMLEG00000035467) #23	NFIB (ENSMLEG00000034055) #24
Sooty mangabey	MODERN SPECIES	629	HAUS6 (ENSCATG00000009800)	RRAGA (ENSCATG00000015913)	SAXO1 (ENSCATG00000034966) #7	ENSCATG00000030026	ADAMTSL1 (ENSCATG00000042482) #9	SH3GL2 (ENSCATG00000004445) #10	CNTLN (ENSCATG00000004826) #11	BNC2 (ENSCATG00000039175) #12	ENSCATG00000019771 #13	CCDC171 (ENSCATG00000039627) #14	PSIP1 (ENSCATG00000037840) #16	ENSCATG00000018868	SNAPC3 (ENSCATG00000042572) #17	TTC39B (ENSCATG00000032662) #18	FREM1 (ENSCATG00000034977) #21	CER1 (ENSCATG00000012176) #22	ZDHHC21 (ENSCATG00000041835) #23	ENSCATG00000019515	ENSCATG00000042024	NFIB (ENSCATG00000035506) #24	MPDZ (ENSCATG00000030031) #27	ENSCATG00000042089 #28	LURAP1L (ENSCATG00000042208) #29	TYRP1 (ENSCATG00000044923) #30	ENSCATG00000040285	ENSCATG00000039554	PTPRD (ENSCATG00000011010) #31	DMAC1 (ENSCATG00000024312) #32	KDM4C (ENSCATG00000044738) #35	ENSCATG00000041153 #36	GLDC (ENSCATG00000040028) #37
Vervet Monkey	MODERN SPECIES	3	DENND4C (ENSCSAG00000009390)	PLIN2 (ENSCSAG00000009362)	HAUS6 (ENSCSAG00000009348)	SAXO1 (ENSCSAG00000009331) #7	ADAMTSL1 (ENSCSAG00000009320) #9	ENSCSAG00000018483 #8	SH3GL2 (ENSCSAG00000009307) #10	CNTLN (ENSCSAG00000009297) #11	BNC2 (ENSCSAG00000009282) #12	ENSCSAG00000009275 #13	CCDC171 (ENSCSAG00000009259) #14	PSIP1 (ENSCSAG00000009243) #16	SNAPC3 (ENSCSAG00000009226) #17	TTC39B (ENSCSAG00000009217) #18	FREM1 (ENSCSAG00000009200) #21	CER1 (ENSCSAG00000009180) #22	ZDHHC21 (ENSCSAG00000009169) #23	NFIB (ENSCSAG00000009158) #24	ENSCSAG00000018485	MPDZ (ENSCSAG00000009137) #27	LURAP1L (ENSCSAG00000009100) #29	TYRP1 (ENSCSAG00000009081) #30	PTPRD (ENSCSAG00000009046) #31	DMAC1 (ENSCSAG00000009013) #32	KDM4C (ENSCSAG00000008997) #35	GLDC (ENSCSAG00000008978) #37	UHRF2 (ENSCSAG00000008957)	TPD52L3 (ENSCSAG00000018487)	IL33 (ENSCSAG00000008936)	RANBP6 (ENSCSAG00000018489)	KIAA2026 (ENSCSAG00000008912)
Rhinopithecus	ANCESTRAL SPECIES	482															ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00390000003582.e.d.b #25	ENSGT00390000002626.d #26	ENSGT00940000155586.B #27	ENSGT00940000154277.a.b.b #28	ENSGT00530000063790.b #29	ENSGT00940000155804 #30
Black snub-nosed monkey	MODERN SPECIES	205															FREM1 (ENSRBIG00000030336) #21	CER1 (ENSRBIG00000029742) #22	ZDHHC21 (ENSRBIG00000040746) #23	NFIB (ENSRBIG00000039693) #24	ENSRBIG00000033804 #25	ENSRBIG00000034572 #26	MPDZ (ENSRBIG00000042415) #27	ENSRBIG00000035073 #28	LURAP1L (ENSRBIG00000045009) #29	TYRP1 (ENSRBIG00000028075) #30	ENSRBIG00000019503
Golden snub-nosed monkey	MODERN SPECIES	769															FREM1 (ENSRROG00000030673) #21	CER1 (ENSRROG00000043095) #22	ZDHHC21 (ENSRROG00000028998) #23	ENSRROG00000021890
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.b.a.b.i.a	ENSGT00390000008250	ENSGT00950000183031.B.e.b.c.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706.m #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00390000014876	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839
Cebidae	ANCESTRAL SPECIES	7	ENSGT00950000182920.b.a.b.a.b.i.a	ENSGT00390000008250	ENSGT00950000183031.B.e.b.c.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00940000154706.m #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00390000014876	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000005185	ENSGT00940000167431	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Marmoset	MODERN SPECIES		ADAMTSL1 (ENSCJAG00000032318) #9	SH3GL2 (ENSCJAG00000012694) #10	ENSCJAG00000087392	CNTLN (ENSCJAG00000012600) #11	BNC2 (ENSCJAG00000012578) #12	ENSCJAG00000032216 #13	ENSCJAG00000084170	CCDC171 (ENSCJAG00000012538) #14	PSIP1 (ENSCJAG00000012471) #16	SNAPC3 (ENSCJAG00000012442) #17	ENSCJAG00000082244	ENSCJAG00000083429	TTC39B (ENSCJAG00000012336) #18	ENSCJAG00000012327	FREM1 (ENSCJAG00000012240) #21	CER1 (ENSCJAG00000012238) #22	ZDHHC21 (ENSCJAG00000041430) #23	ENSCJAG00000083549	NFIB (ENSCJAG00000012155) #24	MPDZ (ENSCJAG00000011950) #27	LURAP1L (ENSCJAG00000011941) #29	TYRP1 (ENSCJAG00000011907) #30	ENSCJAG00000086372	ENSCJAG00000011892	ENSCJAG00000079648	PTPRD (ENSCJAG00000011840) #31	DMAC1 (ENSCJAG00000079307) #32	ENSCJAG00000084180	KDM4C (ENSCJAG00000011746) #35	ENSCJAG00000075021	ENSCJAG00000083745
Cebidae_a	ANCESTRAL SPECIES	84	ENSGT00950000183031.B.e.b.d	ENSGT00950000183031.B.e.b.c.a	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00390000007924 #14	ENSGT00390000018406.j.a	ENSGT00940000154706.m #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00390000014876	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000005185	ENSGT00530000063540.b.v	ENSGT00940000162767	ENSGT00390000011483
Capuchin	MODERN SPECIES	532														ENSCCAG00000023522	FREM1 (ENSCCAG00000018800) #21	CER1 (ENSCCAG00000021183) #22	ZDHHC21 (ENSCCAG00000036977) #23	NFIB (ENSCCAG00000007805) #24	ENSCCAG00000021632
Bolivian squirrel monkey	MODERN SPECIES	69	SAXO1 (ENSSBOG00000026964) #7	ADAMTSL1 (ENSSBOG00000023299) #9	ENSSBOG00000034943	SH3GL2 (ENSSBOG00000032645) #10	CNTLN (ENSSBOG00000034763) #11	BNC2 (ENSSBOG00000023250) #12	ENSSBOG00000028687 #13	CCDC171 (ENSSBOG00000026669) #14	ENSSBOG00000031033	PSIP1 (ENSSBOG00000033737) #16	ENSSBOG00000035820 #17	ENSSBOG00000033785	TTC39B (ENSSBOG00000035178) #18	HPF1 (ENSSBOG00000025298)	FREM1 (ENSSBOG00000027449) #21	CER1 (ENSSBOG00000015623) #22	ZDHHC21 (ENSSBOG00000031063) #23	NFIB (ENSSBOG00000032376) #24	MPDZ (ENSSBOG00000032969) #27	LURAP1L (ENSSBOG00000023028) #29	TYRP1 (ENSSBOG00000028887) #30	ENSSBOG00000019643	ENSSBOG00000033909	PTPRD (ENSSBOG00000020960) #31	ENSSBOG00000030559	ENSSBOG00000031698 #32	KDM4C (ENSSBOG00000025118) #35	GLDC (ENSSBOG00000034257) #37	UHRF2 (ENSSBOG00000024260)	IL33 (ENSSBOG00000003297)	ENSSBOG00000031372
Mas night monkey	MODERN SPECIES	874						BNC2 (ENSANAG00000035051) #12	ENSANAG00000032512 #13	CCDC171 (ENSANAG00000038440) #14	ENSANAG00000026727 #16	SNAPC3 (ENSANAG00000036004) #17	TTC39B (ENSANAG00000024950) #18	ENSANAG00000037779	ENSANAG00000021398	ENSANAG00000017079	FREM1 (ENSANAG00000032176) #21	CER1 (ENSANAG00000028523) #22	ENSANAG00000022275	ZDHHC21 (ENSANAG00000029465) #23	NFIB (ENSANAG00000029821) #24	ENSANAG00000021989	MPDZ (ENSANAG00000024262) #27	LURAP1L (ENSANAG00000027827) #29	TYRP1 (ENSANAG00000022830) #30	PTPRD (ENSANAG00000028534) #31	ENSANAG00000025291
Tarsier	MODERN SPECIES	2527															FREM1 (ENSTSYG00000004164) #21	CER1 (ENSTSYG00000005986) #22	ZDHHC21 (ENSTSYG00000006767) #23
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930.p #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Lemuriformes	ANCESTRAL SPECIES	34	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00410000028916 #13	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708.e #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30
Mouse lemur	MODERN SPECIES	1	PLIN2 (ENSMICG00000005214)	HAUS6 (ENSMICG00000033370)	RRAGA (ENSMICG00000016534)	SAXO1 (ENSMICG00000047006) #7	ADAMTSL1 (ENSMICG00000029970) #9	SH3GL2 (ENSMICG00000009761) #10	CNTLN (ENSMICG00000009738) #11	BNC2 (ENSMICG00000013669) #12	ENSMICG00000013656	CCDC171 (ENSMICG00000005908) #14	ENSMICG00000006064	PSIP1 (ENSMICG00000013923) #16	SNAPC3 (ENSMICG00000013886) #17	TTC39B (ENSMICG00000015971) #18	FREM1 (ENSMICG00000015934) #21	CER1 (ENSMICG00000001257) #22	ZDHHC21 (ENSMICG00000035489) #23	NFIB (ENSMICG00000005833) #24	ENSMICG00000028319	MPDZ (ENSMICG00000010194) #27	LURAP1L (ENSMICG00000032420) #29	TYRP1 (ENSMICG00000017521) #30	ENSMICG00000031881	ENSMICG00000038393	LINGO2 (ENSMICG00000004873)	C9orf72 (ENSMICG00000004861)	MOB3B (ENSMICG00000004847)	EQTN (ENSMICG00000034150)	TEK (ENSMICG00000009269)	ENSMICG00000006418	LRRC19 (ENSMICG00000037703)
Lemuriformes_a	ANCESTRAL SPECIES	35	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708.e #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30
Greater bamboo lemur	MODERN SPECIES	1477														TTC39B (ENSPSMG00000017583) #18	FREM1 (ENSPSMG00000017553) #21	CER1 (ENSPSMG00000017509) #22	ZDHHC21 (ENSPSMG00000017500) #23	NFIB (ENSPSMG00000017453) #24	MPDZ (ENSPSMG00000016907) #27	LURAP1L (ENSPSMG00000016172) #29	TYRP1 (ENSPSMG00000016161) #30
Coquerels sifaka	MODERN SPECIES	1031	PLIN2 (ENSPCOG00000027217)	HAUS6 (ENSPCOG00000026237)	RRAGA (ENSPCOG00000013740)	SAXO1 (ENSPCOG00000021103) #7	ADAMTSL1 (ENSPCOG00000018852) #9	SH3GL2 (ENSPCOG00000027654) #10	ENSPCOG00000028760 #11	BNC2 (ENSPCOG00000021153) #12	ENSPCOG00000025026 #13	ENSPCOG00000020527	CCDC171 (ENSPCOG00000019049) #14	PSIP1 (ENSPCOG00000027672) #16	ENSPCOG00000027201 #17	TTC39B (ENSPCOG00000027564) #18	FREM1 (ENSPCOG00000027087) #21	CER1 (ENSPCOG00000022597) #22	ZDHHC21 (ENSPCOG00000015647) #23	NFIB (ENSPCOG00000017145) #24	ENSPCOG00000003214	MPDZ (ENSPCOG00000024357) #27	LURAP1L (ENSPCOG00000022670) #29	ENSPCOG00000000064 #30
Bushbaby	MODERN SPECIES	121	PLIN2 (ENSOGAG00000006364)	HAUS6 (ENSOGAG00000006361)	SAXO1 (ENSOGAG00000006354) #7	ENSOGAG00000016604 #9	ENSOGAG00000016595 #9	SH3GL2 (ENSOGAG00000013983) #10	CNTLN (ENSOGAG00000013973) #11	ENSOGAG00000032938 #12	BNC2 (ENSOGAG00000001628) #12	CCDC171 (ENSOGAG00000002180) #14	PSIP1 (ENSOGAG00000002179) #16	SNAPC3 (ENSOGAG00000002175) #17	ENSOGAG00000028248	TTC39B (ENSOGAG00000011887) #18	FREM1 (ENSOGAG00000011871) #21	CER1 (ENSOGAG00000011870) #22	ZDHHC21 (ENSOGAG00000011869) #23	NFIB (ENSOGAG00000016282) #24	MPDZ (ENSOGAG00000006106) #27	LURAP1L (ENSOGAG00000030142) #29	TYRP1 (ENSOGAG00000013041) #30	PTPRD (ENSOGAG00000007930) #31	KDM4C (ENSOGAG00000009288) #35	APEX2 (ENSOGAG00000007797)	GLDC (ENSOGAG00000026078) #37	UHRF2 (ENSOGAG00000010598)	TPD52L3 (ENSOGAG00000011718)	ENSOGAG00000004525	RANBP6 (ENSOGAG00000010992)	ENSOGAG00000032415	ENSOGAG00000030737
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Glires	ANCESTRAL SPECIES	9	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT01030000234519.e.a.a.a.a.b	ENSGT00940000153241.A	ENSGT00390000013287	ENSGT00940000162569.b
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577	ENSGT00520000057958	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT01030000234519.e.a.a.a.a.b	ENSGT00940000153241.A	ENSGT00390000013287
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577	ENSGT00520000057958	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00940000161177	ENSGT00950000183190.a.b.a.a	ENSGT00940000158084
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577	ENSGT00520000057958	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00940000161177	ENSGT00950000183190.a.b.a.a	ENSGT00940000158084
Cricetinae	ANCESTRAL SPECIES	21	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00940000169234	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577	ENSGT00520000057958	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00940000161177	ENSGT00950000183190.a.b.a.a	ENSGT00940000158084
Chinese hamster chok1gshd	MODERN SPECIES	111	ENSCGRG00001022609	Dennd4c (ENSCGRG00001004609)	Plin2 (ENSCGRG00001016267)	Saxo1 (ENSCGRG00001017278) #7	Adamtsl1 (ENSCGRG00001004761) #9	Sh3gl2 (ENSCGRG00001022450) #10	Cntln (ENSCGRG00001005303) #11	ENSCGRG00001006130	Bnc2 (ENSCGRG00001021192) #12	Ccdc171 (ENSCGRG00001012100) #14	Psip1 (ENSCGRG00001018077) #16	Snapc3 (ENSCGRG00001021052) #17	Ttc39b (ENSCGRG00001023116) #18	ENSCGRG00001006351	Frem1 (ENSCGRG00001012504) #21	Cer1 (ENSCGRG00001014082) #22	Zdhhc21 (ENSCGRG00001015866) #23	Nfib (ENSCGRG00001018402) #24	Mpdz (ENSCGRG00001023758) #27	ENSCGRG00001017051	Lurap1l (ENSCGRG00001018238) #29	Tyrp1 (ENSCGRG00001020616) #30	Ptprd (ENSCGRG00001001921) #31	Dmac1 (ENSCGRG00001012676) #32	ENSCGRG00001003314	Kdm4c (ENSCGRG00001014973) #35	Frmd3 (ENSCGRG00001020520)	ENSCGRG00001022505	2310002L09Rik (ENSCGRG00001024634)	Rasef (ENSCGRG00001001324)	ENSCGRG00001001298
Golden Hamster	MODERN SPECIES	740							Cntln (ENSMAUG00000016827) #11	Bnc2 (ENSMAUG00000017038) #12	Ccdc171 (ENSMAUG00000013269) #14	Psip1 (ENSMAUG00000014312) #16	ENSMAUG00000008531 #17	ENSMAUG00000002025	Ttc39b (ENSMAUG00000008949) #18	ENSMAUG00000011212	Frem1 (ENSMAUG00000014922) #21	Cer1 (ENSMAUG00000013311) #22	Zdhhc21 (ENSMAUG00000000495) #23	Nfib (ENSMAUG00000007632) #24	ENSMAUG00000003146 #27	ENSMAUG00000005222 #27	Lurap1l (ENSMAUG00000014887) #29	Tyrp1 (ENSMAUG00000017874) #30	ENSMAUG00000006579
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577	ENSGT00520000057958	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00940000161177	ENSGT00950000183190.a.b.a.a	ENSGT00940000158084
Northern American deer mouse	MODERN SPECIES	11	Haus6 (ENSPEMG00000028376)	Rraga (ENSPEMG00000012776)	Saxo1 (ENSPEMG00000000040) #7	Adamtsl1 (ENSPEMG00000005320) #9	Sh3gl2 (ENSPEMG00000010691) #10	ENSPEMG00000012875	Cntln (ENSPEMG00000013809) #11	Bnc2 (ENSPEMG00000006553) #12	ENSPEMG00000026637	Ccdc171 (ENSPEMG00000009589) #14	Psip1 (ENSPEMG00000015309) #16	Snapc3 (ENSPEMG00000015671) #17	Ttc39b (ENSPEMG00000017249) #18	ENSPEMG00000028674	Frem1 (ENSPEMG00000007771) #21	Cer1 (ENSPEMG00000013498) #22	Zdhhc21 (ENSPEMG00000011202) #23	Nfib (ENSPEMG00000015036) #24	Mpdz (ENSPEMG00000002221) #27	Lurap1l (ENSPEMG00000028913) #29	ENSPEMG00000026523	Tyrp1 (ENSPEMG00000020081) #30	Ptprd (ENSPEMG00000017837) #31	Dmac1 (ENSPEMG00000004174) #32	ENSPEMG00000014283	Kdm4c (ENSPEMG00000009673) #35	Frmd3 (ENSPEMG00000018030)	2310002L09Rik (ENSPEMG00000011897)	Rasef (ENSPEMG00000002797)	ENSPEMG00000026811	Tle1 (ENSPEMG00000009903)
Prairie vole	MODERN SPECIES	1	Rps6 (ENSMOCG00000004590)	Dennd4c (ENSMOCG00000001944)	ENSMOCG00000014772	ENSMOCG00000023023	Saxo1 (ENSMOCG00000016102) #7	Adamtsl1 (ENSMOCG00000000817) #9	Sh3gl2 (ENSMOCG00000022289) #10	Cntln (ENSMOCG00000019830) #11	ENSMOCG00000008451	Bnc2 (ENSMOCG00000015132) #12	Ccdc171 (ENSMOCG00000016262) #14	Psip1 (ENSMOCG00000003043) #16	ENSMOCG00000014331 #17	Ttc39b (ENSMOCG00000005864) #18	Frem1 (ENSMOCG00000018942) #21	Cer1 (ENSMOCG00000022515) #22	Zdhhc21 (ENSMOCG00000015320) #23	Nfib (ENSMOCG00000021986) #24	ENSMOCG00000020921 #27	ENSMOCG00000018271 #27	Lurap1l (ENSMOCG00000015966) #29	Tyrp1 (ENSMOCG00000015263) #30	ENSMOCG00000004135	Ptprd (ENSMOCG00000001990) #31	ENSMOCG00000015211 #32	ENSMOCG00000012575	ENSMOCG00000013894 #35	Frmd3 (ENSMOCG00000008934)	2310002L09Rik (ENSMOCG00000022037)	Rasef (ENSMOCG00000000943)	Tle1 (ENSMOCG00000017405)
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577	ENSGT00520000057958	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00740000117018	ENSGT00940000161177	ENSGT00950000183190.a.b.a.a
Mus	ANCESTRAL SPECIES	3	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577	ENSGT00520000057958	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00740000117018	ENSGT00940000161177	ENSGT00950000183190.a.b.a.a
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577.e	ENSGT00520000057958.a	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00740000117018.a.b	ENSGT00940000161177	ENSGT00950000183190.a.b.a.a
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.u #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577.e	ENSGT00520000057958.a	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00740000117018.a.b	ENSGT00940000161177	ENSGT00950000183190.a.b.a.a
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.u #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000158577.e	ENSGT00520000057958.a	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.a	ENSGT00740000117018.a.b	ENSGT00740000117018.b	ENSGT00940000161177
spretus	MODERN SPECIES	13	Rps6 (MGP_SPRETEiJ_G0027100)	Dennd4c (MGP_SPRETEiJ_G0027099)	Plin2 (MGP_SPRETEiJ_G0027098)	Haus6 (MGP_SPRETEiJ_G0027097)	Rraga (MGP_SPRETEiJ_G0027096)	Saxo1 (MGP_SPRETEiJ_G0027095) #7	Adamtsl1 (MGP_SPRETEiJ_G0027094) #9	MGP_SPRETEiJ_G0027093 #10	Cntln (MGP_SPRETEiJ_G0027092) #11	Bnc2 (MGP_SPRETEiJ_G0027091) #12	Ccdc171 (MGP_SPRETEiJ_G0027090) #14	Psip1 (MGP_SPRETEiJ_G0027089) #16	Snapc3 (MGP_SPRETEiJ_G0027088) #17	Ttc39b (MGP_SPRETEiJ_G0027087) #18	Frem1 (MGP_SPRETEiJ_G0027086) #21	Cer1 (MGP_SPRETEiJ_G0027085) #22	Zdhhc21 (MGP_SPRETEiJ_G0027084) #23	Nfib (MGP_SPRETEiJ_G0027083) #24	Mpdz (MGP_SPRETEiJ_G0027082) #27	Lurap1l (MGP_SPRETEiJ_G0027081) #29	Tyrp1 (MGP_SPRETEiJ_G0027080) #30	MGP_SPRETEiJ_G0027079	Dmac1 (MGP_SPRETEiJ_G0027078) #32	Kdm4c (MGP_SPRETEiJ_G0027077) #35	Frmd3 (MGP_SPRETEiJ_G0027076)	MGP_SPRETEiJ_G0027075	Tle1 (MGP_SPRETEiJ_G0027074)	MGP_SPRETEiJ_G0027073	Megf9 (MGP_SPRETEiJ_G0027072)	Cdk5rap2 (MGP_SPRETEiJ_G0027071)	Brinp1 (MGP_SPRETEiJ_G0027070)
Steppe mouse	MODERN SPECIES	3323				Haus6 (ENSMSIG00000021584)	Rraga (ENSMSIG00000021592)	Saxo1 (ENSMSIG00000021596) #7	Adamtsl1 (ENSMSIG00000021606) #9	ENSMSIG00000021744 #10	Cntln (ENSMSIG00000021797) #11	Bnc2 (ENSMSIG00000021983) #12	Ccdc171 (ENSMSIG00000022141) #14	Psip1 (ENSMSIG00000022367) #16	Snapc3 (ENSMSIG00000022439) #17	Ttc39b (ENSMSIG00000022488) #18	Frem1 (ENSMSIG00000022742) #21	Cer1 (ENSMSIG00000022937) #22	Zdhhc21 (ENSMSIG00000022950) #23	Nfib (ENSMSIG00000023003) #24
Mouse	MODERN SPECIES	13	Rps6 (ENSMUSG00000028495)	Dennd4c (ENSMUSG00000038024)	Plin2 (ENSMUSG00000028494)	Haus6 (ENSMUSG00000038047)	Rraga (ENSMUSG00000070934)	Saxo1 (ENSMUSG00000028492) #7	Adamtsl1 (ENSMUSG00000066113) #9	Sh3gl2 (ENSMUSG00000028488) #10	Cntln (ENSMUSG00000038070) #11	Bnc2 (ENSMUSG00000028487) #12	Ccdc171 (ENSMUSG00000052407) #14	Psip1 (ENSMUSG00000028484) #16	Snapc3 (ENSMUSG00000028483) #17	Ttc39b (ENSMUSG00000038172) #18	Frem1 (ENSMUSG00000059049) #21	Cer1 (ENSMUSG00000038192) #22	Zdhhc21 (ENSMUSG00000028403) #23	Nfib (ENSMUSG00000008575) #24	Mpdz (ENSMUSG00000028402) #27	Lurap1l (ENSMUSG00000048706) #29	Tyrp1 (ENSMUSG00000005994) #30	Ptprd (ENSMUSG00000028399) #31	Dmac1 (ENSMUSG00000028398) #32	Kdm4c (ENSMUSG00000028397) #35	Frmd3 (ENSMUSG00000049122)	2310002L09Rik (ENSMUSG00000028396)	Gm11756 (ENSMUSG00000093962)	Gm13871 (ENSMUSG00000096333)	Gm11757 (ENSMUSG00000096750)	Gm11758 (ENSMUSG00000096530)	Rasef (ENSMUSG00000043003)
Ryukyu mouse	MODERN SPECIES	13	MGP_CAROLIEiJ_G0026135	Dennd4c (MGP_CAROLIEiJ_G0026134)	Plin2 (MGP_CAROLIEiJ_G0026133)	MGP_CAROLIEiJ_G0026132	Rraga (MGP_CAROLIEiJ_G0026131)	Saxo1 (MGP_CAROLIEiJ_G0026130) #7	Adamtsl1 (MGP_CAROLIEiJ_G0026129) #9	Sh3gl2 (MGP_CAROLIEiJ_G0026128) #10	Cntln (MGP_CAROLIEiJ_G0026127) #11	Bnc2 (MGP_CAROLIEiJ_G0026126) #12	Ccdc171 (MGP_CAROLIEiJ_G0026125) #14	Psip1 (MGP_CAROLIEiJ_G0026124) #16	Snapc3 (MGP_CAROLIEiJ_G0026123) #17	Ttc39b (MGP_CAROLIEiJ_G0026122) #18	Frem1 (MGP_CAROLIEiJ_G0026121) #21	Cer1 (MGP_CAROLIEiJ_G0026120) #22	Zdhhc21 (MGP_CAROLIEiJ_G0026119) #23	Nfib (MGP_CAROLIEiJ_G0026118) #24	Mpdz (MGP_CAROLIEiJ_G0026117) #27	Lurap1l (MGP_CAROLIEiJ_G0026116) #29	Tyrp1 (MGP_CAROLIEiJ_G0026115) #30	Ptprd (MGP_CAROLIEiJ_G0026114) #31	Dmac1 (MGP_CAROLIEiJ_G0026113) #32	Kdm4c (MGP_CAROLIEiJ_G0026112) #35	Frmd3 (MGP_CAROLIEiJ_G0026111)	2310002L09Rik (MGP_CAROLIEiJ_G0026110)	MGP_CAROLIEiJ_G0026109	Tle1 (MGP_CAROLIEiJ_G0026108)	Gm11232 (MGP_CAROLIEiJ_G0026107)	Megf9 (MGP_CAROLIEiJ_G0026106)	Cdk5rap2 (MGP_CAROLIEiJ_G0026105)
Shrew mouse	MODERN SPECIES	19	MGP_PahariEiJ_G0028473	Dennd4c (MGP_PahariEiJ_G0028472)	Plin2 (MGP_PahariEiJ_G0028471)	Haus6 (MGP_PahariEiJ_G0028470)	Rraga (MGP_PahariEiJ_G0028469)	Saxo1 (MGP_PahariEiJ_G0028468) #7	Adamtsl1 (MGP_PahariEiJ_G0028467) #9	MGP_PahariEiJ_G0028466 #10	Cntln (MGP_PahariEiJ_G0028465) #11	Bnc2 (MGP_PahariEiJ_G0028464) #12	Ccdc171 (MGP_PahariEiJ_G0028463) #14	Psip1 (MGP_PahariEiJ_G0028462) #16	Snapc3 (MGP_PahariEiJ_G0028461) #17	Ttc39b (MGP_PahariEiJ_G0028460) #18	Frem1 (MGP_PahariEiJ_G0028459) #21	Cer1 (MGP_PahariEiJ_G0028458) #22	Zdhhc21 (MGP_PahariEiJ_G0028457) #23	Nfib (MGP_PahariEiJ_G0028456) #24	MGP_PahariEiJ_G0028455 #27	Lurap1l (MGP_PahariEiJ_G0028454) #29	Tyrp1 (MGP_PahariEiJ_G0028453) #30	Ptprd (MGP_PahariEiJ_G0028452) #31	Dmac1 (MGP_PahariEiJ_G0028451) #32	Kdm4c (MGP_PahariEiJ_G0028450) #35	Frmd3 (MGP_PahariEiJ_G0028449)	2310002L09Rik (MGP_PahariEiJ_G0028448)	Rasef (MGP_PahariEiJ_G0028447)	Tle1 (MGP_PahariEiJ_G0028446)	MGP_PahariEiJ_G0028445	Megf9 (MGP_PahariEiJ_G0028444)	Cdk5rap2 (MGP_PahariEiJ_G0028443)
Rat	MODERN SPECIES	15	Haus6 (ENSRNOG00000046028)	Rraga (ENSRNOG00000007051)	Saxo1 (ENSRNOG00000048197) #7	Adamtsl1 (ENSRNOG00000006956) #9	Sh3gl2 (ENSRNOG00000006761) #10	Cntln (ENSRNOG00000043151) #11	Bnc2 (ENSRNOG00000006553) #12	LOC120102904 (ENSRNOG00000067108)	ENSRNOG00000064241	AABR07049060.1 (ENSRNOG00000033445) #14	Psip1 (ENSRNOG00000011498) #16	Snapc3 (ENSRNOG00000010825) #17	AABR07049043.1 (ENSRNOG00000047278)	Ttc39b (ENSRNOG00000042603) #18	Frem1 (ENSRNOG00000022309) #21	Cer1 (ENSRNOG00000010518) #22	Zdhhc21 (ENSRNOG00000010484) #23	Nfib (ENSRNOG00000009795) #24	Mpdz (ENSRNOG00000007894) #27	LOC120102902 (ENSRNOG00000065656)	RGD1565987 (ENSRNOG00000062659)	Lurap1l (ENSRNOG00000033740) #29	Tyrp1 (ENSRNOG00000029318) #30	ENSRNOG00000065765 ##15	RGD1563375 (ENSRNOG00000065031)	Snurf-ps2 (ENSRNOG00000022595)	Ptprd (ENSRNOG00000005711) #31	Dmac1 (ENSRNOG00000023946) #32	Kdm4c (ENSRNOG00000006644) #35	AABR07048770.1 (ENSRNOG00000031344)	Frmd3 (ENSRNOG00000006503)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1459														Ttc39b (ENSNGAG00000019817) #18	Frem1 (ENSNGAG00000018085) #21	Cer1 (ENSNGAG00000015175) #22	Zdhhc21 (ENSNGAG00000021676) #23	Nfib (ENSNGAG00000021838) #24	Mpdz (ENSNGAG00000022630) #27	Lurap1l (ENSNGAG00000018504) #29	Tyrp1 (ENSNGAG00000024330) #30	Ptprd (ENSNGAG00000011273) #31
Lesser Egyptian jerboa	MODERN SPECIES	66	ENSJJAG00000014571 #9	ENSJJAG00000010272	ENSJJAG00000024102	Sh3gl2 (ENSJJAG00000017618) #10	ENSJJAG00000011696	ENSJJAG00000008188 #11	ENSJJAG00000022818 #11	Bnc2 (ENSJJAG00000004324) #12	ENSJJAG00000019056	Ccdc171 (ENSJJAG00000020916) #14	ENSJJAG00000015360 #16	Snapc3 (ENSJJAG00000018408) #17	Ttc39b (ENSJJAG00000004238) #18	ENSJJAG00000010564	ENSJJAG00000015519 #21	Cer1 (ENSJJAG00000023511) #22	Zdhhc21 (ENSJJAG00000002851) #23	Nfib (ENSJJAG00000013052) #24	ENSJJAG00000010432	Mpdz (ENSJJAG00000012097) #27	Lurap1l (ENSJJAG00000014520) #29	Tyrp1 (ENSJJAG00000015009) #30	ENSJJAG00000010326	ENSJJAG00000023453
Kangaroo rat	MODERN SPECIES	372	Haus6 (ENSDORG00000026577)	Saxo1 (ENSDORG00000026559) #7	ENSDORG00000025399 #9	ENSDORG00000024977 #9	ENSDORG00000027313	Sh3gl2 (ENSDORG00000000622) #10	ENSDORG00000028767 #11	Bnc2 (ENSDORG00000008840) #12	Ccdc171 (ENSDORG00000005630) #14	Psip1 (ENSDORG00000004907) #16	ENSDORG00000004905 #17	ENSDORG00000024125	Ttc39b (ENSDORG00000014589) #18	Frem1 (ENSDORG00000014455) #21	ENSDORG00000023435	Cer1 (ENSDORG00000014454) #22	Zdhhc21 (ENSDORG00000026832) #23	Nfib (ENSDORG00000004277) #24	ENSDORG00000006362 #27
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Hystricomorpha	ANCESTRAL SPECIES	46	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243.jb #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839
Hystricomorpha_a	ANCESTRAL SPECIES	53	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243.jb #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839
Hystricomorpha_b	ANCESTRAL SPECIES	71	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243.jb #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839
Long-tailed chinchilla	MODERN SPECIES	141	ENSCLAG00000009131	DENND4C (ENSCLAG00000007655)	PLIN2 (ENSCLAG00000006627)	HAUS6 (ENSCLAG00000015951)	RRAGA (ENSCLAG00000017884)	SAXO1 (ENSCLAG00000015777) #7	ADAMTSL1 (ENSCLAG00000016263) #9	SH3GL2 (ENSCLAG00000012375) #10	ENSCLAG00000010823 #11	BNC2 (ENSCLAG00000009846) #12	CCDC171 (ENSCLAG00000012226) #14	PSIP1 (ENSCLAG00000013790) #16	ENSCLAG00000010768 #17	TTC39B (ENSCLAG00000010926) #18	FREM1 (ENSCLAG00000006808) #21	CER1 (ENSCLAG00000010883) #22	ZDHHC21 (ENSCLAG00000009678) #23	NFIB (ENSCLAG00000012227) #24	MPDZ (ENSCLAG00000007286) #27	ENSCLAG00000014441	LURAP1L (ENSCLAG00000013531) #29	TYRP1 (ENSCLAG00000007960) #30	PTPRD (ENSCLAG00000005730) #31	DMAC1 (ENSCLAG00000007861) #32	KDM4C (ENSCLAG00000006468) #35	GLDC (ENSCLAG00000005815) #37	UHRF2 (ENSCLAG00000004646)	IL33 (ENSCLAG00000008507)	RANBP6 (ENSCLAG00000017716)	KIAA2026 (ENSCLAG00000010624)	MLANA (ENSCLAG00000005918)
Guinea pig	MODERN SPECIES	21	ENSCPOG00000011958 #8	ENSCPOG00000025832	HAUS6 (ENSCPOG00000008053)	RRAGA (ENSCPOG00000008047)	ENSCPOG00000031962	ADAMTSL1 (ENSCPOG00000003783) #9	SH3GL2 (ENSCPOG00000015380) #10	ENSCPOG00000032617 #11	BNC2 (ENSCPOG00000006163) #12	CCDC171 (ENSCPOG00000012939) #14	ENSCPOG00000032438	PSIP1 (ENSCPOG00000005095) #16	SNAPC3 (ENSCPOG00000005081) #17	TTC39B (ENSCPOG00000004887) #18	FREM1 (ENSCPOG00000011267) #21	CER1 (ENSCPOG00000011943) #22	ZDHHC21 (ENSCPOG00000032754) #23	NFIB (ENSCPOG00000003925) #24	MPDZ (ENSCPOG00000008962) #27	LURAP1L (ENSCPOG00000037440) #29	TYRP1 (ENSCPOG00000014078) #30	PTPRD (ENSCPOG00000003625) #31	DMAC1 (ENSCPOG00000033539) #32	KDM4C (ENSCPOG00000004700) #35	GLDC (ENSCPOG00000004844) #37	UHRF2 (ENSCPOG00000004838)	IL33 (ENSCPOG00000030316)	RANBP6 (ENSCPOG00000005398)	KIAA2026 (ENSCPOG00000013437)	ENSCPOG00000039570	MLANA (ENSCPOG00000013436)
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000013333 #9	SH3GL2 (ENSHGLG00000012899) #10	CNTLN (ENSHGLG00000017883) #11	BNC2 (ENSHGLG00000009182) #12	ENSHGLG00000048786	CCDC171 (ENSHGLG00000005804) #14	ENSHGLG00000037696	ENSHGLG00000009693	PSIP1 (ENSHGLG00000010046) #16	ENSHGLG00000033501 #17	ENSHGLG00000018545 #18	ENSHGLG00000034380	ENSHGLG00000017979	ENSHGLG00000017971 #21	ENSHGLG00000039407	CER1 (ENSHGLG00000017945) #22	ENSHGLG00000050241 #23	NFIB (ENSHGLG00000010895) #24	ENSHGLG00000005821	MPDZ (ENSHGLG00000016510) #27	ENSHGLG00000031927	ENSHGLG00000016836	LURAP1L (ENSHGLG00000046955) #29	ENSHGLG00000015404 #30	ENSHGLG00000008769	ENSHGLG00000012054	ENSHGLG00000021417	PTPRD (ENSHGLG00000011342) #31	ENSHGLG00000033356	ENSHGLG00000044985	ENSHGLG00000036074 #32
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Marmotini	ANCESTRAL SPECIES	1	ENSGT00390000009819.a.b.a.a.a.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Marmotini_b	ANCESTRAL SPECIES	118	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Arctic ground squirrel	MODERN SPECIES	200										BNC2 (ENSUPAG00010019192) #12	CCDC171 (ENSUPAG00010019240) #14	PSIP1 (ENSUPAG00010019272) #16	SNAPC3 (ENSUPAG00010019316) #17	TTC39B (ENSUPAG00010019335) #18	FREM1 (ENSUPAG00010019362) #21	CER1 (ENSUPAG00010019407) #22	ZDHHC21 (ENSUPAG00010019414) #23	NFIB (ENSUPAG00010019428) #24	MPDZ (ENSUPAG00010019555) #27
Alpin marmot	MODERN SPECIES	83	ENSMMMG00000006686	RRAGA (ENSMMMG00000006689)	SAXO1 (ENSMMMG00000006694) #7	ENSMMMG00000006707	ADAMTSL1 (ENSMMMG00000006719) #9	ENSMMMG00000006805	SH3GL2 (ENSMMMG00000006807) #10	CNTLN (ENSMMMG00000006867) #11	BNC2 (ENSMMMG00000006931) #12	CCDC171 (ENSMMMG00000007048) #14	PSIP1 (ENSMMMG00000007110) #16	SNAPC3 (ENSMMMG00000007194) #17	ENSMMMG00000007221	TTC39B (ENSMMMG00000007232) #18	FREM1 (ENSMMMG00000007262) #21	CER1 (ENSMMMG00000007339) #22	ZDHHC21 (ENSMMMG00000007346) #23	NFIB (ENSMMMG00000007378) #24	ENSMMMG00000007584	ENSMMMG00000007595	MPDZ (ENSMMMG00000007606) #27
Eurasian red squirrel	MODERN SPECIES	6	RRAGA (ENSSVLG00005022081)	SAXO1 (ENSSVLG00005021951) #7	ADAMTSL1 (ENSSVLG00005021790) #9	ENSSVLG00005021741	SH3GL2 (ENSSVLG00005021671) #10	CNTLN (ENSSVLG00005021621) #11	ENSSVLG00005021593	BNC2 (ENSSVLG00005021503) #12	CCDC171 (ENSSVLG00005021247) #14	PSIP1 (ENSSVLG00005021148) #16	SNAPC3 (ENSSVLG00005021073) #17	ENSSVLG00005021059	TTC39B (ENSSVLG00005020698) #18	ENSSVLG00005020502 #21	ENSSVLG00005020385 #21	CER1 (ENSSVLG00005020347) #22	ZDHHC21 (ENSSVLG00005020275) #23	NFIB (ENSSVLG00005019808) #24	ENSSVLG00005019293	MPDZ (ENSSVLG00005019125) #27	LURAP1L (ENSSVLG00005019004) #29	TYRP1 (ENSSVLG00005018842) #30	ENSSVLG00005018805	ENSSVLG00005018792	PTPRD (ENSSVLG00005016434) #31	ENSSVLG00005016242	DMAC1 (ENSSVLG00005016213) #32	ENSSVLG00005025401	KDM4C (ENSSVLG00005025382) #35	ENSSVLG00005025367	ENSSVLG00005025356
Lagomorpha	ANCESTRAL SPECIES	68	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000167431	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955
Rabbit	MODERN SPECIES		ENSOCUG00000003336	DENND4C (ENSOCUG00000003320)	PLIN2 (ENSOCUG00000012244)	HAUS6 (ENSOCUG00000003507)	RRAGA (ENSOCUG00000003506)	SAXO1 (ENSOCUG00000012362) #7	ADAMTSL1 (ENSOCUG00000004895) #9	SH3GL2 (ENSOCUG00000001183) #10	CNTLN (ENSOCUG00000002551) #11	BNC2 (ENSOCUG00000004460) #12	CCDC171 (ENSOCUG00000009327) #14	PSIP1 (ENSOCUG00000009319) #16	SNAPC3 (ENSOCUG00000009315) #17	TTC39B (ENSOCUG00000010656) #18	FREM1 (ENSOCUG00000010379) #21	CER1 (ENSOCUG00000010374) #22	ZDHHC21 (ENSOCUG00000010367) #23	NFIB (ENSOCUG00000004249) #24	ENSOCUG00000033352	ENSOCUG00000031288	MPDZ (ENSOCUG00000004401) #27	LURAP1L (ENSOCUG00000004226) #29	TYRP1 (ENSOCUG00000004221) #30	ENSOCUG00000005565	ENSOCUG00000038133	ENSOCUG00000037326	ENSOCUG00000037042	PTPRD (ENSOCUG00000000847) #31	ENSOCUG00000027888	DMAC1 (ENSOCUG00000000982) #32	ENSOCUG00000026913
Pika	MODERN SPECIES	2058															FREM1 (ENSOPRG00000017066) #21	CER1 (ENSOPRG00000017062) #22
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Eulipotyphla	ANCESTRAL SPECIES	447															ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23
Common shrew	MODERN SPECIES	5506															ENSSARG00000010446 #21	CER1 (ENSSARG00000010443) #22	ENSSARG00000010438 #23
Hedgehog	MODERN SPECIES	4436															FREM1 (ENSEEUG00000001483) #21	CER1 (ENSEEUG00000001472) #22
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Chiroptera	ANCESTRAL SPECIES	40	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Microchiroptera	ANCESTRAL SPECIES	36	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Greater horseshoe bat	MODERN SPECIES	3	RPS6 (ENSRFEG00010008554)	DENND4C (ENSRFEG00010008632)	PLIN2 (ENSRFEG00010008729)	HAUS6 (ENSRFEG00010008787)	RRAGA (ENSRFEG00010008891)	SAXO1 (ENSRFEG00010008917) #7	ADAMTSL1 (ENSRFEG00010009043) #9	SH3GL2 (ENSRFEG00010009214) #10	CNTLN (ENSRFEG00010009257) #11	BNC2 (ENSRFEG00010009307) #12	CCDC171 (ENSRFEG00010009460) #14	ENSRFEG00010009522 #16	SNAPC3 (ENSRFEG00010009780) #17	TTC39B (ENSRFEG00010009842) #18	FREM1 (ENSRFEG00010010458) #21	CER1 (ENSRFEG00010010664) #22	ZDHHC21 (ENSRFEG00010010717) #23	NFIB (ENSRFEG00010010838) #24	MPDZ (ENSRFEG00010011615) #27	LURAP1L (ENSRFEG00010012161) #29	TYRP1 (ENSRFEG00010012208) #30	ENSRFEG00010012417	PTPRD (ENSRFEG00010012473) #31	DMAC1 (ENSRFEG00010012840) #32	ENSRFEG00010012856	KDM4C (ENSRFEG00010012878) #35	GLDC (ENSRFEG00010013019) #37	UHRF2 (ENSRFEG00010013711)	ENSRFEG00010013772	IL33 (ENSRFEG00010013826)	ENSRFEG00010013891
Microbat	MODERN SPECIES	1016														TTC39B (ENSMLUG00000016611) #18	FREM1 (ENSMLUG00000016591) #21	CER1 (ENSMLUG00000016586) #22	ZDHHC21 (ENSMLUG00000016581) #23	NFIB (ENSMLUG00000000241) #24	MPDZ (ENSMLUG00000004842) #27	LURAP1L (ENSMLUG00000007228) #29	TYRP1 (ENSMLUG00000007211) #30	ENSMLUG00000003277	ENSMLUG00000022350
Megabat	MODERN SPECIES	3372														TTC39B (ENSPVAG00000014245) #18	FREM1 (ENSPVAG00000014241) #21	CER1 (ENSPVAG00000014239) #22	ZDHHC21 (ENSPVAG00000014238) #23
Equus	ANCESTRAL SPECIES	37	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00940000154847.j	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00900000143826	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110.a	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Donkey	MODERN SPECIES	15	DENND4C (ENSEASG00005019226)	PLIN2 (ENSEASG00005019242)	HAUS6 (ENSEASG00005019247)	RRAGA (ENSEASG00005023970)	SAXO1 (ENSEASG00005019269) #7	ADAMTSL1 (ENSEASG00005019273) #9	SH3GL2 (ENSEASG00005019277) #10	ENSEASG00005019283	CNTLN (ENSEASG00005019290) #11	BNC2 (ENSEASG00005019302) #12	CCDC171 (ENSEASG00005019311) #14	PSIP1 (ENSEASG00005019322) #16	SNAPC3 (ENSEASG00005019324) #17	TTC39B (ENSEASG00005019326) #18	FREM1 (ENSEASG00005019331) #21	CER1 (ENSEASG00005024797) #22	ZDHHC21 (ENSEASG00005019341) #23	NFIB (ENSEASG00005019346) #24	MPDZ (ENSEASG00005019366) #27	LURAP1L (ENSEASG00005031483) #29	TYRP1 (ENSEASG00005019393) #30	PTPRD (ENSEASG00005010959) #31	ENSEASG00005010725	DMAC1 (ENSEASG00005010719) #32	ENSEASG00005026087	KDM4C (ENSEASG00005010714) #35	GLDC (ENSEASG00005010707) #37	UHRF2 (ENSEASG00005010699)	TPD52L3 (ENSEASG00005036119)	IL33 (ENSEASG00005010691)	ENSEASG00005029347
Horse	MODERN SPECIES	15	SAXO1 (ENSECAG00000011294) #7	ENSECAG00000059197 #9	ADAMTSL1 (ENSECAG00000015972) #9	SH3GL2 (ENSECAG00000009922) #10	ENSECAG00000037460	CNTLN (ENSECAG00000020007) #11	BNC2 (ENSECAG00000017503) #12	CCDC171 (ENSECAG00000009424) #14	PSIP1 (ENSECAG00000012666) #16	SNAPC3 (ENSECAG00000006422) #17	ENSECAG00000037681	ENSECAG00000048402	TTC39B (ENSECAG00000024552) #18	ENSECAG00000009605	FREM1 (ENSECAG00000015567) #21	CER1 (ENSECAG00000014945) #22	ZDHHC21 (ENSECAG00000014502) #23	NFIB (ENSECAG00000024578) #24	MPDZ (ENSECAG00000008445) #27	LURAP1L (ENSECAG00000008425) #29	TYRP1 (ENSECAG00000009440) #30	ENSECAG00000014453	ENSECAG00000044470	PTPRD (ENSECAG00000009864) #31	ENSECAG00000052035	ENSECAG00000009849 #32	KDM4C (ENSECAG00000024063) #35	GLDC (ENSECAG00000002389) #37	UHRF2 (ENSECAG00000013985)	ENSECAG00000042096	IL33 (ENSECAG00000010475)
Carnivora	ANCESTRAL SPECIES	18	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT01060000249305	ENSGT00940000162767	ENSGT00390000011483
Caniformia	ANCESTRAL SPECIES	16	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT01060000249305	ENSGT00940000162767	ENSGT00390000011483
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT01060000249305	ENSGT00940000162767	ENSGT00390000011483
Ursidae	ANCESTRAL SPECIES	6	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215.c	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804.h #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT01060000249305	ENSGT00390000011483	ENSGT00390000009531
Ursus	ANCESTRAL SPECIES	166	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215.c	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804.h #30
American black bear	MODERN SPECIES	3177																CER1 (ENSUAMG00000022831) #22	ZDHHC21 (ENSUAMG00000022830) #23
Polar bear	MODERN SPECIES	163	PLIN2 (ENSUMAG00000017117)	ENSUMAG00000017125	HAUS6 (ENSUMAG00000017141)	RRAGA (ENSUMAG00000017178)	SAXO1 (ENSUMAG00000017184) #7	ENSUMAG00000017219 #9	ENSUMAG00000017257 #9	SH3GL2 (ENSUMAG00000017265) #10	CNTLN (ENSUMAG00000017286) #11	BNC2 (ENSUMAG00000017376) #12	CCDC171 (ENSUMAG00000017455) #14	PSIP1 (ENSUMAG00000017500) #16	SNAPC3 (ENSUMAG00000017506) #17	TTC39B (ENSUMAG00000017507) #18	FREM1 (ENSUMAG00000017516) #21	CER1 (ENSUMAG00000017560) #22	ZDHHC21 (ENSUMAG00000017564) #23	NFIB (ENSUMAG00000017572) #24	MPDZ (ENSUMAG00000017885) #27	LURAP1L (ENSUMAG00000019888) #29	TYRP1 (ENSUMAG00000019891) #30
Giant Panda	MODERN SPECIES	17	DENND4C (ENSAMEG00000002859)	PLIN2 (ENSAMEG00000002827)	HAUS6 (ENSAMEG00000002777)	RRAGA (ENSAMEG00000030176)	SAXO1 (ENSAMEG00000014021) #7	ADAMTSL1 (ENSAMEG00000010811) #9	SH3GL2 (ENSAMEG00000010823) #10	CNTLN (ENSAMEG00000026276) #11	BNC2 (ENSAMEG00000012362) #12	CCDC171 (ENSAMEG00000002081) #14	PSIP1 (ENSAMEG00000002039) #16	SNAPC3 (ENSAMEG00000002018) #17	ENSAMEG00000030269	TTC39B (ENSAMEG00000001933) #18	FREM1 (ENSAMEG00000001889) #21	CER1 (ENSAMEG00000001883) #22	ZDHHC21 (ENSAMEG00000001866) #23	NFIB (ENSAMEG00000001820) #24	MPDZ (ENSAMEG00000001732) #27	LURAP1L (ENSAMEG00000003127) #29	TYRP1 (ENSAMEG00000003109) #30	PTPRD (ENSAMEG00000013806) #31	DMAC1 (ENSAMEG00000028926) #32	ENSAMEG00000026849	KDM4C (ENSAMEG00000000360) #35	GLDC (ENSAMEG00000015836) #37	UHRF2 (ENSAMEG00000015792)	ENSAMEG00000020096	IL33 (ENSAMEG00000005773)	ENSAMEG00000028659	KIAA2026 (ENSAMEG00000000945)
Mustelinae	ANCESTRAL SPECIES	98	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30
American mink	MODERN SPECIES	296															ENSNVIG00000019214 #21	CER1 (ENSNVIG00000019207) #22	ZDH21 (ENSNVIG00000019180) #23	NFIB (ENSNVIG00000019097) #24	MPDZ (ENSNVIG00000018126) #27	LUR1L (ENSNVIG00000018058) #29	TYRP1 (ENSNVIG00000017995) #30
Canidae	ANCESTRAL SPECIES	9	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00950000185182	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000170703	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT01060000249305	ENSGT00390000011483
Canis_lupus	ANCESTRAL SPECIES	15	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00950000185182	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708.c #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000170703	ENSGT00390000011838.c	ENSGT00390000018344.k.a.a	ENSGT00390000009786.u.a.a.b	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000013040.h	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a
Dingo	MODERN SPECIES	366	ENSCAFG00020012910	ENSCAFG00020012903	ENSCAFG00020012896 #9	SH3GL2 (ENSCAFG00020012892) #10	ENSCAFG00020012874 #11	ENSCAFG00020012861 #11	ENSCAFG00020012834	BNC2 (ENSCAFG00020012831) #12	ENSCAFG00020012807	ENSCAFG00020012801	ENSCAFG00020012797	PSIP1 (ENSCAFG00020012699) #16	SNAPC3 (ENSCAFG00020012694) #17	TTC39B (ENSCAFG00020012365) #18	FREM1 (ENSCAFG00020012330) #21	CER1 (ENSCAFG00020012315) #22	ZDHHC21 (ENSCAFG00020012310) #23	NFIB (ENSCAFG00020012292) #24	ENSCAFG00020012267 #27	ENSCAFG00020012263 #27	ENSCAFG00020012246 #27	LURAP1L (ENSCAFG00020012235) #29	TYRP1 (ENSCAFG00020012219) #30	ENSCAFG00020012197	ENSCAFG00020012154	ENSCAFG00020012115	ENSCAFG00020012101	PTPRD (ENSCAFG00020011926) #31	DMAC1 (ENSCAFG00020011907) #32	ENSCAFG00020011905	KDM4C (ENSCAFG00020011753) #35
Dog	MODERN SPECIES	2	DENND4C (ENSCAFG00845014314)	PLIN2 (ENSCAFG00845014245)	HAUS6 (ENSCAFG00845014208)	RRAGA (ENSCAFG00845014185)	SAXO1 (ENSCAFG00845014141) #7	ENSCAFG00845014115	ADAMTSL1 (ENSCAFG00845013926) #9	SH3GL2 (ENSCAFG00845013834) #10	CNTLN (ENSCAFG00845013467) #11	BNC2 (ENSCAFG00845013048) #12	CCDC171 (ENSCAFG00845012549) #14	ENSCAFG00845012431 #16	ENSCAFG00845012408 #17	TTC39B (ENSCAFG00845011800) #18	FREM1 (ENSCAFG00845011452) #21	CER1 (ENSCAFG00845011372) #22	ZDHHC21 (ENSCAFG00845011296) #23	NFIB (ENSCAFG00845010942) #24	MPDZ (ENSCAFG00845009080) #27	LURAP1L (ENSCAFG00845008832) #29	TYRP1 (ENSCAFG00845008780) #30	ENSCAFG00845008733	MED8 (ENSCAFG00845008705)	ENSCAFG00845008576	ENSCAFG00845028174	PTPRD (ENSCAFG00845026437) #31	DMAC1 (ENSCAFG00845026094) #32	KDM4C (ENSCAFG00845025468) #35	ENSCAFG00845025338	GLDC (ENSCAFG00845024762) #37	UHRF2 (ENSCAFG00845024233)
Red fox	MODERN SPECIES	36	DENND4C (ENSVVUG00000000667)	HAUS6 (ENSVVUG00000000634)	RRAGA (ENSVVUG00000000604)	SAXO1 (ENSVVUG00000000588) #7	ENSVVUG00000000571	ADAMTSL1 (ENSVVUG00000000485) #9	SH3GL2 (ENSVVUG00000000404) #10	CNTLN (ENSVVUG00000000301) #11	BNC2 (ENSVVUG00000000069) #12	CCDC171 (ENSVVUG00000022879) #14	ENSVVUG00000022868 #16	ENSVVUG00000022866 #16	SNAPC3 (ENSVVUG00000022862) #17	TTC39B (ENSVVUG00000022857) #18	FREM1 (ENSVVUG00000022843) #21	CER1 (ENSVVUG00000022841) #22	ZDHHC21 (ENSVVUG00000022834) #23	NFIB (ENSVVUG00000022820) #24	MPDZ (ENSVVUG00000020800) #27	ENSVVUG00000020699	LURAP1L (ENSVVUG00000020697) #29	TYRP1 (ENSVVUG00000020691) #30	ENSVVUG00000020682	ENSVVUG00000020675	ENSVVUG00000020670	ENSVVUG00000020659	ENSVVUG00000020650	PTPRD (ENSVVUG00000020612) #31	ENSVVUG00000020606	DMAC1 (ENSVVUG00000020600) #32	ENSVVUG00000020592 #35
Felidae	ANCESTRAL SPECIES	16	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT01090000260175	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT01060000249305	ENSGT00390000011483
Panthera	ANCESTRAL SPECIES	11	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT01090000260175	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT01060000249305	ENSGT00390000011483
Tiger	MODERN SPECIES	588	PLIN2 (ENSPTIG00000012619)	HAUS6 (ENSPTIG00000013541)	RRAGA (ENSPTIG00000006849)	SAXO1 (ENSPTIG00000016509) #7	ADAMTSL1 (ENSPTIG00000017390) #9	SH3GL2 (ENSPTIG00000008377) #10	CNTLN (ENSPTIG00000009406) #11	ENSPTIG00000007093	BNC2 (ENSPTIG00000011574) #12	ENSPTIG00000011934	CCDC171 (ENSPTIG00000012503) #14	PSIP1 (ENSPTIG00000015257) #16	SNAPC3 (ENSPTIG00000017166) #17	TTC39B (ENSPTIG00000018264) #18	FREM1 (ENSPTIG00000021453) #21	CER1 (ENSPTIG00000014020) #22	ZDHHC21 (ENSPTIG00000014725) #23	ENSPTIG00000014888 #24	ENSPTIG00000016099 #24	MPDZ (ENSPTIG00000021963) #27	LURAP1L (ENSPTIG00000017232) #29	TYRP1 (ENSPTIG00000017613) #30	PTPRD (ENSPTIG00000019873) #31	DMAC1 (ENSPTIG00000008291) #32	KDM4C (ENSPTIG00000008735) #35	ENSPTIG00000021643	GLDC (ENSPTIG00000005559) #37	ENSPTIG00000011035	UHRF2 (ENSPTIG00000011559)	TPD52L3 (ENSPTIG00000012957)	IL33 (ENSPTIG00000013529)
Panthera_a	ANCESTRAL SPECIES	60	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00940000167408	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT01090000260175	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT01060000249305	ENSGT00390000011483
leopard	MODERN SPECIES	65	PLIN2 (ENSPPRG00000021465)	HAUS6 (ENSPPRG00000021239)	RRAGA (ENSPPRG00000021236)	SAXO1 (ENSPPRG00000018241) #7	ADAMTSL1 (ENSPPRG00000017489) #9	SH3GL2 (ENSPPRG00000014326) #10	CNTLN (ENSPPRG00000014202) #11	ENSPPRG00000021053	BNC2 (ENSPPRG00000013553) #12	ENSPPRG00000013453	CCDC171 (ENSPPRG00000012907) #14	PSIP1 (ENSPPRG00000012404) #16	SNAPC3 (ENSPPRG00000012176) #17	TTC39B (ENSPPRG00000011978) #18	FREM1 (ENSPPRG00000010436) #21	CER1 (ENSPPRG00000008223) #22	ZDHHC21 (ENSPPRG00000008191) #23	ENSPPRG00000008174 #24	ENSPPRG00000007963 #24	MPDZ (ENSPPRG00000006676) #27	LURAP1L (ENSPPRG00000003119) #29	TYRP1 (ENSPPRG00000002966) #30	PTPRD (ENSPPRG00000002526) #31	DMAC1 (ENSPPRG00000024190) #32	ENSPPRG00000024221
lion	MODERN SPECIES	13	DENND4C (ENSPLOG00000007889)	PLIN2 (ENSPLOG00000007840)	HAUS6 (ENSPLOG00000007785)	RRAGA (ENSPLOG00000007764)	SAXO1 (ENSPLOG00000007710) #7	ADAMTSL1 (ENSPLOG00000007398) #9	SH3GL2 (ENSPLOG00000007300) #10	CNTLN (ENSPLOG00000007270) #11	ENSPLOG00000007241	BNC2 (ENSPLOG00000007214) #12	CCDC171 (ENSPLOG00000007150) #14	PSIP1 (ENSPLOG00000007038) #16	SNAPC3 (ENSPLOG00000006993) #17	TTC39B (ENSPLOG00000006788) #18	FREM1 (ENSPLOG00000006548) #21	CER1 (ENSPLOG00000006515) #22	ZDHHC21 (ENSPLOG00000006492) #23	ENSPLOG00000006467	NFIB (ENSPLOG00000006109) #24	MLANA (ENSPLOG00000005874)	KIAA2026 (ENSPLOG00000005840)	ENSPLOG00000005809	IL33 (ENSPLOG00000005762)	TPD52L3 (ENSPLOG00000005730)	UHRF2 (ENSPLOG00000005717)	GLDC (ENSPLOG00000005598) #37	KDM4C (ENSPLOG00000005468) #35	DMAC1 (ENSPLOG00000005410) #32	PTPRD (ENSPLOG00000022133) #31	TYRP1 (ENSPLOG00000021962) #30	LURAP1L (ENSPLOG00000021948) #29
Cat	MODERN SPECIES	244	PLIN2 (ENSFCAG00000002659)	HAUS6 (ENSFCAG00000028281)	RRAGA (ENSFCAG00000022742)	SAXO1 (ENSFCAG00000004841) #7	ADAMTSL1 (ENSFCAG00000004840) #9	ENSFCAG00000031200	SH3GL2 (ENSFCAG00000004584) #10	CNTLN (ENSFCAG00000014219) #11	BNC2 (ENSFCAG00000027700) #12	ENSFCAG00000029809	CCDC171 (ENSFCAG00000000682) #14	PSIP1 (ENSFCAG00000028662) #16	SNAPC3 (ENSFCAG00000003173) #17	TTC39B (ENSFCAG00000014061) #18	FREM1 (ENSFCAG00000004349) #21	CER1 (ENSFCAG00000043135) #22	ENSFCAG00000038305	ZDHHC21 (ENSFCAG00000006708) #23	NFIB (ENSFCAG00000008473) #24	MPDZ (ENSFCAG00000011491) #27	LURAP1L (ENSFCAG00000023143) #29	TYRP1 (ENSFCAG00000019011) #30	PTPRD (ENSFCAG00000024457) #31	DMAC1 (ENSFCAG00000039645) #32	ENSFCAG00000043969	KDM4C (ENSFCAG00000008249) #35	GLDC (ENSFCAG00000000440) #37	UHRF2 (ENSFCAG00000026987)	TPD52L3 (ENSFCAG00000004165)	IL33 (ENSFCAG00000009049)	ENSFCAG00000041956
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Suina	ANCESTRAL SPECIES	23	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Pig	MODERN SPECIES		DENND4C (ENSSSCG00000005170)	PLIN2 (ENSSSCG00000035863)	HAUS6 (ENSSSCG00000005173)	RRAGA (ENSSSCG00000005174)	SAXO1 (ENSSSCG00000040408) #7	ADAMTSL1 (ENSSSCG00000040366) #9	SH3GL2 (ENSSSCG00000005177) #10	CNTLN (ENSSSCG00000005178) #11	ENSSSCG00000044896	BNC2 (ENSSSCG00000005180) #12	CCDC171 (ENSSSCG00000005182) #14	PSIP1 (ENSSSCG00000005183) #16	SNAPC3 (ENSSSCG00000005184) #17	TTC39B (ENSSSCG00000005186) #18	FREM1 (ENSSSCG00000039025) #21	CER1 (ENSSSCG00000039169) #22	ZDHHC21 (ENSSSCG00000035730) #23	NFIB (ENSSSCG00000005190) #24	MPDZ (ENSSSCG00000005191) #27	LURAP1L (ENSSSCG00000036360) #29	TYRP1 (ENSSSCG00000005193) #30	ENSSSCG00000044797	ENSSSCG00000046197	ENSSSCG00000041506	PTPRD (ENSSSCG00000005194) #31	ENSSSCG00000060403	DMAC1 (ENSSSCG00000005196) #32	ENSSSCG00000062923	ENSSSCG00000046128	KDM4C (ENSSSCG00000005198) #35	GLDC (ENSSSCG00000005199) #37
Chacoan peccary	MODERN SPECIES	20						ADAMTSL1 (ENSCWAG00000000833) #9	SH3GL2 (ENSCWAG00000000738) #10	CNTLN (ENSCWAG00000000681) #11	ENSCWAG00000000663	BNC2 (ENSCWAG00000000651) #12	CCDC171 (ENSCWAG00000000635) #14	PSIP1 (ENSCWAG00000000604) #16	SNAPC3 (ENSCWAG00000000564) #17	TTC39B (ENSCWAG00000000168) #18	FREM1 (ENSCWAG00000000026) #21	CER1 (ENSCWAG00000000010) #22	ZDHHC21 (ENSCWAG00000000006) #23	NFIB (ENSCWAG00000021849) #24	MPDZ (ENSCWAG00000021809) #27	LURAP1L (ENSCWAG00000021784) #29	TYRP1 (ENSCWAG00000021775) #30	PTPRD (ENSCWAG00000021420) #31	DMAC1 (ENSCWAG00000021335) #32	KDM4C (ENSCWAG00000021287) #35	GLDC (ENSCWAG00000021210) #37	UHRF2 (ENSCWAG00000021187)	ENSCWAG00000021178	IL33 (ENSCWAG00000021170)	ENSCWAG00000021159	KIAA2026 (ENSCWAG00000021140)	MLANA (ENSCWAG00000021120)
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Cetacea	ANCESTRAL SPECIES	9	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.fb #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970.k #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00940000167219	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00980000202136	ENSGT00390000007924 #14	ENSGT00940000154706.fb #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970.k #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00940000167219	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00980000202136	ENSGT00390000007924 #14	ENSGT00940000154706.fb #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970.k #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Dolphin	MODERN SPECIES	2864															FREM1 (ENSTTRG00000008037) #21	CER1 (ENSTTRG00000008035) #22	ZDHHC21 (ENSTTRG00000008034) #23
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00940000167219	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00980000202136	ENSGT00390000007924 #14	ENSGT00940000154706.fb #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970.k #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00940000167219	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00980000202136	ENSGT00390000007924 #14	ENSGT00940000154706.fb #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970.k #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Narwhal	MODERN SPECIES	312	ENSMMNG00015016682	DENND4C (ENSMMNG00015016748)	PLIN2 (ENSMMNG00015016875)	HAUS6 (ENSMMNG00015016919)	RRAGA (ENSMMNG00015017043)	SAXO1 (ENSMMNG00015017061) #7	ADAMTSL1 (ENSMMNG00015017181) #9	SH3GL2 (ENSMMNG00015017433) #10	CNTLN (ENSMMNG00015017488) #11	BNC2 (ENSMMNG00015017606) #12	CCDC171 (ENSMMNG00015017724) #14	ENSMMNG00015017788 #16	SNAPC3 (ENSMMNG00015017842) #17	TTC39B (ENSMMNG00015017960) #18	FREM1 (ENSMMNG00015018425) #21	CER1 (ENSMMNG00015018604) #22	ZDHHC21 (ENSMMNG00015018625) #23	NFIB (ENSMMNG00015018858) #24	MPDZ (ENSMMNG00015019518) #27	LURAP1L (ENSMMNG00015019625) #29	TYRP1 (ENSMMNG00015019643) #30	ENSMMNG00015019665	ENSMMNG00015019678	PTPRD (ENSMMNG00015019797) #31	ENSMMNG00015020117 #32	KDM4C (ENSMMNG00015020148) #35	GLDC (ENSMMNG00015020203) #37	UHRF2 (ENSMMNG00015020267)	TPD52L3 (ENSMMNG00015020325)	IL33 (ENSMMNG00015020337)	ENSMMNG00015020366
Beluga whale	MODERN SPECIES	50	HAUS6 (ENSDLEG00000020327)	RRAGA (ENSDLEG00000020323)	SAXO1 (ENSDLEG00000020320) #7	ADAMTSL1 (ENSDLEG00000020295) #9	SH3GL2 (ENSDLEG00000020276) #10	ENSDLEG00000020272	CNTLN (ENSDLEG00000020249) #11	BNC2 (ENSDLEG00000020245) #12	ENSDLEG00000020244	CCDC171 (ENSDLEG00000020209) #14	ENSDLEG00000020205 #16	ENSDLEG00000020201 #16	SNAPC3 (ENSDLEG00000020200) #17	TTC39B (ENSDLEG00000020187) #18	FREM1 (ENSDLEG00000020177) #21	CER1 (ENSDLEG00000020173) #22	ZDHHC21 (ENSDLEG00000020168) #23	NFIB (ENSDLEG00000020159) #24	MPDZ (ENSDLEG00000014917) #27	LURAP1L (ENSDLEG00000014337) #29	TYRP1 (ENSDLEG00000014303) #30	ENSDLEG00000014285	PTPRD (ENSDLEG00000014171) #31	ENSDLEG00000014144 #32	ENSDLEG00000014119	KDM4C (ENSDLEG00000014058) #35	GLDC (ENSDLEG00000019814) #37	UHRF2 (ENSDLEG00000019777)	TPD52L3 (ENSDLEG00000019764)	IL33 (ENSDLEG00000019759)	RANBP6 (ENSDLEG00000019757)
Vaquita	MODERN SPECIES	17	PLIN2 (ENSPSNG00000000648)	HAUS6 (ENSPSNG00000000609)	RRAGA (ENSPSNG00000000588)	SAXO1 (ENSPSNG00000000559) #7	ADAMTSL1 (ENSPSNG00000000378) #9	SH3GL2 (ENSPSNG00000000201) #10	ENSPSNG00000022547	CNTLN (ENSPSNG00000022536) #11	BNC2 (ENSPSNG00000022532) #12	CCDC171 (ENSPSNG00000022518) #14	ENSPSNG00000022504 #16	SNAPC3 (ENSPSNG00000022494) #17	TTC39B (ENSPSNG00000022479) #18	ENSPSNG00000022475	FREM1 (ENSPSNG00000022456) #21	CER1 (ENSPSNG00000022441) #22	ZDHHC21 (ENSPSNG00000022435) #23	NFIB (ENSPSNG00000022385) #24	MPDZ (ENSPSNG00000022311) #27	LURAP1L (ENSPSNG00000022271) #29	TYRP1 (ENSPSNG00000022265) #30	ENSPSNG00000022260	ENSPSNG00000022254	PTPRD (ENSPSNG00000021753) #31	DMAC1 (ENSPSNG00000021465) #32	KDM4C (ENSPSNG00000021418) #35	GLDC (ENSPSNG00000021229) #37	UHRF2 (ENSPSNG00000021087)	TPD52L3 (ENSPSNG00000021045)	IL33 (ENSPSNG00000021022)	RANBP6 (ENSPSNG00000020980)
Sperm whale	MODERN SPECIES	20	PLIN2 (ENSPCTG00005014826)	HAUS6 (ENSPCTG00005014663)	RRAGA (ENSPCTG00005014645)	SAXO1 (ENSPCTG00005014539) #7	ADAMTSL1 (ENSPCTG00005014310) #9	SH3GL2 (ENSPCTG00005014162) #10	ENSPCTG00005014109	CNTLN (ENSPCTG00005013443) #11	BNC2 (ENSPCTG00005013082) #12	ENSPCTG00005012892	CCDC171 (ENSPCTG00005012856) #14	PSIP1 (ENSPCTG00005012760) #16	SNAPC3 (ENSPCTG00005012674) #17	TTC39B (ENSPCTG00005012122) #18	FREM1 (ENSPCTG00005011922) #21	CER1 (ENSPCTG00005011869) #22	ZDHHC21 (ENSPCTG00005011818) #23	NFIB (ENSPCTG00005011215) #24	MPDZ (ENSPCTG00005010169) #27	LURAP1L (ENSPCTG00005010045) #29	TYRP1 (ENSPCTG00005010004) #30	ENSPCTG00005009971	ENSPCTG00005009950	ENSPCTG00005009943	ENSPCTG00005009904	PTPRD (ENSPCTG00005007163) #31	DMAC1 (ENSPCTG00005006883) #32	KDM4C (ENSPCTG00005006836) #35	ENSPCTG00005006795	ENSPCTG00005006778	GLDC (ENSPCTG00005006582) #37
Blue whale	MODERN SPECIES	17	PLIN2 (ENSBMSG00010000722)	HAUS6 (ENSBMSG00010000758)	RRAGA (ENSBMSG00010000814)	SAXO1 (ENSBMSG00010000850) #7	ADAMTSL1 (ENSBMSG00010000917) #9	SH3GL2 (ENSBMSG00010000983) #10	CNTLN (ENSBMSG00010001014) #11	ENSBMSG00010001031	BNC2 (ENSBMSG00010001079) #12	CCDC171 (ENSBMSG00010001177) #14	ENSBMSG00010001228	ENSBMSG00010001274 #16	SNAPC3 (ENSBMSG00010001390) #17	TTC39B (ENSBMSG00010001423) #18	FREM1 (ENSBMSG00010001498) #21	CER1 (ENSBMSG00010001538) #22	ZDHHC21 (ENSBMSG00010001550) #23	NFIB (ENSBMSG00010001691) #24	MPDZ (ENSBMSG00010002836) #27	LURAP1L (ENSBMSG00010002885) #29	TYRP1 (ENSBMSG00010002890) #30	ENSBMSG00010002910	ENSBMSG00010002917	PTPRD (ENSBMSG00010003108) #31	ENSBMSG00010003625	DMAC1 (ENSBMSG00010003630) #32	KDM4C (ENSBMSG00010003640) #35	ENSBMSG00010003657	ENSBMSG00010003666	ENSBMSG00010003689 #37	UHRF2 (ENSBMSG00010003727)
Pecora	ANCESTRAL SPECIES	30	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000167431	ENSGT00390000011483	ENSGT00390000009531
Percora_a	ANCESTRAL SPECIES	24	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000167431	ENSGT00390000011483	ENSGT00390000009531
Bovidae	ANCESTRAL SPECIES	14	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154445.c.b	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT01010000222946.d.a	ENSGT00390000012916.y.a.a.a	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000156197.c.b	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00940000167431
Caprinae	ANCESTRAL SPECIES	14	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154445.c.b	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT01010000222946.d.a	ENSGT00390000012916.y.a.a.a	ENSGT00940000174448	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.hb #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000156197.c.b	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483
Goat	MODERN SPECIES	27	HAUS6 (ENSCHIG00000024615)	ENSCHIG00000015472	RRAGA (ENSCHIG00000004994)	SAXO1 (ENSCHIG00000015222) #7	ADAMTSL1 (ENSCHIG00000025981) #9	SH3GL2 (ENSCHIG00000020328) #10	CNTLN (ENSCHIG00000013033) #11	BNC2 (ENSCHIG00000026061) #12	ENSCHIG00000018914	CCDC171 (ENSCHIG00000013723) #14	ENSCHIG00000008194	ENSCHIG00000016679 #16	SNAPC3 (ENSCHIG00000020068) #17	TTC39B (ENSCHIG00000010421) #18	FREM1 (ENSCHIG00000026018) #21	CER1 (ENSCHIG00000016733) #22	ZDHHC21 (ENSCHIG00000021429) #23	NFIB (ENSCHIG00000012253) #24	ENSCHIG00000024971	MPDZ (ENSCHIG00000022331) #27	LURAP1L (ENSCHIG00000015129) #29	TYRP1 (ENSCHIG00000026269) #30	ENSCHIG00000016449	ENSCHIG00000007639	ENSCHIG00000023085	PTPRD (ENSCHIG00000017325) #31	DMAC1 (ENSCHIG00000012785) #32	KDM4C (ENSCHIG00000026551) #35	ENSCHIG00000003454	ENSCHIG00000003295	GLDC (ENSCHIG00000022064) #37
Rambouillet Sheep	MODERN SPECIES	11	RRAGA (ENSOARG00020021439)	SAXO1 (ENSOARG00020021405) #7	ADAMTSL1 (ENSOARG00020020780) #9	ENSOARG00020020688	SH3GL2 (ENSOARG00020020587) #10	ENSOARG00020020547	CNTLN (ENSOARG00020019193) #11	ENSOARG00020019104	ENSOARG00020019055	BNC2 (ENSOARG00020019012) #12	CCDC171 (ENSOARG00020018543) #14	PSIP1 (ENSOARG00020018370) #16	SNAPC3 (ENSOARG00020018297) #17	TTC39B (ENSOARG00020015060) #18	FREM1 (ENSOARG00020014731) #21	CER1 (ENSOARG00020014680) #22	ZDHHC21 (ENSOARG00020014506) #23	MAGOH (ENSOARG00020014469)	NFIB (ENSOARG00020013533) #24	ENSOARG00020013372	ENSOARG00020013331	MPDZ (ENSOARG00020012892) #27	ENSOARG00020012805	LURAP1L (ENSOARG00020012766) #29	TYRP1 (ENSOARG00020012665) #30	ENSOARG00020012534	ENSOARG00020012496	PTPRD (ENSOARG00020010720) #31	DMAC1 (ENSOARG00020010598) #32	ENSOARG00020010545	KDM4C (ENSOARG00020010019) #35
Bovinae	ANCESTRAL SPECIES	14	ENSGT00950000183031.B.e.b.a.a.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154445.c.b	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT01010000222946.d.a	ENSGT00390000012916.y.a.a.a	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000156197.c.b	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000010415.b	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000167431
Bos	ANCESTRAL SPECIES	10	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b.a.a.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154445.c.b	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155485.a.a.b.a.b	ENSGT00940000153169.A.b.b.a.a.a.b.l.d	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000010415.b	ENSGT00940000163110	ENSGT00390000005185
Bos_b	ANCESTRAL SPECIES	3	ENSGT00390000008250	ENSGT00950000183031.B.e.b.a.a.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154445.c.b	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT01010000222946.d.a	ENSGT00390000005844.a.b #12	ENSGT00940000153272.a.b.z.a.a.b.b.b	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155485.a.a.b.a.b.a	ENSGT00940000153169.A.b.b.a.a.a.b.l.d	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00940000156197.c.b	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000010415.b	ENSGT00940000163110
Cow	MODERN SPECIES	27	HAUS6 (ENSBTAG00000019843)	RRAGA (ENSBTAG00000033543)	SAXO1 (ENSBTAG00000001322) #7	ADAMTSL1 (ENSBTAG00000002997) #9	ENSBTAG00000052821	SH3GL2 (ENSBTAG00000014103) #10	CNTLN (ENSBTAG00000001847) #11	BNC2 (ENSBTAG00000003669) #12	ENSBTAG00000050560	ENSBTAG00000051373	CCDC171 (ENSBTAG00000015788) #14	PSIP1 (ENSBTAG00000007872) #16	SNAPC3 (ENSBTAG00000004592) #17	TTC39B (ENSBTAG00000003943) #18	FREM1 (ENSBTAG00000020141) #21	CER1 (ENSBTAG00000020140) #22	ZDHHC21 (ENSBTAG00000006197) #23	NFIB (ENSBTAG00000027442) #24	ENSBTAG00000051763	ENSBTAG00000050450	MPDZ (ENSBTAG00000043961) #27	LURAP1L (ENSBTAG00000010431) #29	TYRP1 (ENSBTAG00000020985) #30	PTPRD (ENSBTAG00000010178) #31	DMAC1 (ENSBTAG00000015963)	KDM4C (ENSBTAG00000043987)	GLDC (ENSBTAG00000025903)	UHRF2 (ENSBTAG00000020815)	ENSBTAG00000011161	TPD52L3 (ENSBTAG00000011160)	IL33 (ENSBTAG00000018347)
Hybrid Bos Indicus	MODERN SPECIES	27	HAUS6 (ENSBIXG00005024512)	ENSBIXG00005024481	SAXO1 (ENSBIXG00005024469) #7	ADAMTSL1 (ENSBIXG00005024378) #9	ENSBIXG00005004132	SH3GL2 (ENSBIXG00005024065) #10	CNTLN (ENSBIXG00005004104) #11	BNC2 (ENSBIXG00005023593) #12	ENSBIXG00005004005	ENSBIXG00005023383	CCDC171 (ENSBIXG00005023307) #14	PSIP1 (ENSBIXG00005023133) #16	SNAPC3 (ENSBIXG00005023074) #17	TTC39B (ENSBIXG00005022889) #18	FREM1 (ENSBIXG00005022347) #21	CER1 (ENSBIXG00005022110) #22	ZDHHC21 (ENSBIXG00005022088) #23	ENSBIXG00005007219	ENSBIXG00005022053	NFIB (ENSBIXG00005022011) #24	ENSBIXG00005021690	MPDZ (ENSBIXG00005021591) #27	ENSBIXG00005021107	LURAP1L (ENSBIXG00005021080) #29	TYRP1 (ENSBIXG00005021057) #30	ENSBIXG00005021026	ENSBIXG00005020918	ENSBIXG00005020897	PTPRD (ENSBIXG00005007348) #31	ENSBIXG00005020457	DMAC1 (ENSBIXG00005020420) #32
Bos_a	ANCESTRAL SPECIES	69	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b.a.a.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00940000169573	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155485.a.a.b.a.b	ENSGT00940000153169.A.b.b.a.a.a.b.l.d	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30
Wild yak	MODERN SPECIES	248				SAXO1 (ENSBMUG00000023083) #7	ADAMTSL1 (ENSBMUG00000023158) #9	SH3GL2 (ENSBMUG00000023179) #10	CNTLN (ENSBMUG00000023260) #11	BNC2 (ENSBMUG00000023306) #12	ENSBMUG00000023316	CCDC171 (ENSBMUG00000023392) #14	PSIP1 (ENSBMUG00000023451) #16	ENSBMUG00000023480 #17	ENSBMUG00000023483	TTC39B (ENSBMUG00000023513) #18	FREM1 (ENSBMUG00000023548) #21	CER1 (ENSBMUG00000023570) #22	ZDHHC21 (ENSBMUG00000023580) #23	NFIB (ENSBMUG00000023743) #24
Domestic yak	MODERN SPECIES	26	SAXO1 (ENSBGRG00000001788) #7	ADAMTSL1 (ENSBGRG00000001481) #9	SH3GL2 (ENSBGRG00000001359) #10	CNTLN (ENSBGRG00000001209) #11	ENSBGRG00000001180	ENSBGRG00000001168	ENSBGRG00000001156	BNC2 (ENSBGRG00000001132) #12	ENSBGRG00000001114	CCDC171 (ENSBGRG00000001014) #14	PSIP1 (ENSBGRG00000000925) #16	SNAPC3 (ENSBGRG00000000894) #17	TTC39B (ENSBGRG00000000855) #18	ENSBGRG00000000840	FREM1 (ENSBGRG00000000792) #21	CER1 (ENSBGRG00000000761) #22	ZDHHC21 (ENSBGRG00000000701) #23	NFIB (ENSBGRG00000000469) #24	ENSBGRG00000000367	ENSBGRG00000009063	ENSBGRG00000009027	MPDZ (ENSBGRG00000008603) #27	LURAP1L (ENSBGRG00000008550) #29	TYRP1 (ENSBGRG00000008419) #30	ENSBGRG00000008400	ENSBGRG00000008319	ENSBGRG00000008285	ENSBGRG00000008266	PTPRD (ENSBGRG00000007730) #31	DMAC1 (ENSBGRG00000007629) #32	KDM4C (ENSBGRG00000007351) #35
American bison	MODERN SPECIES	3290	PLIN2 (ENSBBBG00000017830)	HAUS6 (ENSBBBG00000017870)	ENSBBBG00000017875	SAXO1 (ENSBBBG00000017886) #7	ADAMTSL1 (ENSBBBG00000008934) #9	SH3GL2 (ENSBBBG00000018088) #10	CNTLN (ENSBBBG00000018243) #11	ENSBBBG00000004478	ENSBBBG00000018269	BNC2 (ENSBBBG00000018306) #12	CCDC171 (ENSBBBG00000018338) #14	PSIP1 (ENSBBBG00000018434) #16	SNAPC3 (ENSBBBG00000004526) #17	TTC39B (ENSBBBG00000004559) #18	FREM1 (ENSBBBG00000018588) #21	CER1 (ENSBBBG00000004604) #22	ZDHHC21 (ENSBBBG00000018604) #23	NFIB (ENSBBBG00000004689) #24	MPDZ (ENSBBBG00000009182) #27	LURAP1L (ENSBBBG00000019440) #29	TYRP1 (ENSBBBG00000005231) #30	ENSBBBG00000005234	ENSBBBG00000005240	PTPRD (ENSBBBG00000005080) #31	DMAC1 (ENSBBBG00000020176) #32	KDM4C (ENSBBBG00000005462) #35	ENSBBBG00000020239	GLDC (ENSBBBG00000005035) #37	UHRF2 (ENSBBBG00000020305)	ENSBBBG00000020318	ENSBBBG00000020325
Siberian musk deer	MODERN SPECIES	109	SAXO1 (ENSMMSG00000001832) #7	ADAMTSL1 (ENSMMSG00000001894) #9	ENSMMSG00000002061	ENSMMSG00000002077	ENSMMSG00000002089	SH3GL2 (ENSMMSG00000002113) #10	CNTLN (ENSMMSG00000002129) #11	ENSMMSG00000002171	ENSMMSG00000002181	BNC2 (ENSMMSG00000002209) #12	CCDC171 (ENSMMSG00000002290) #14	PSIP1 (ENSMMSG00000002346) #16	SNAPC3 (ENSMMSG00000002384) #17	TTC39B (ENSMMSG00000002423) #18	FREM1 (ENSMMSG00000000034) #21	CER1 (ENSMMSG00000000079) #22	ZDHHC21 (ENSMMSG00000000101) #23	NFIB (ENSMMSG00000000239) #24	MPDZ (ENSMMSG00000000540) #27	LURAP1L (ENSMMSG00000000872) #29	TYRP1 (ENSMMSG00000000891) #30	ENSMMSG00000000939	ENSMMSG00000000975
Yarkand deer	MODERN SPECIES	21	HAUS6 (ENSCHYG00000015668)	RRAGA (ENSCHYG00000015829)	SAXO1 (ENSCHYG00000015986) #7	ADAMTSL1 (ENSCHYG00000016203) #9	ENSCHYG00000016808	ENSCHYG00000016858 #16	ENSCHYG00000016900	SH3GL2 (ENSCHYG00000016922) #10	CNTLN (ENSCHYG00000017019) #11	BNC2 (ENSCHYG00000017910) #12	CCDC171 (ENSCHYG00000018817) #14	ENSCHYG00000020029 #16	SNAPC3 (ENSCHYG00000020183) #17	TTC39B (ENSCHYG00000020315) #18	FREM1 (ENSCHYG00000021523) #21	CER1 (ENSCHYG00000022269) #22	ZDHHC21 (ENSCHYG00000022318) #23	ENSCHYG00000022379	NFIB (ENSCHYG00000022448) #24	MPDZ (ENSCHYG00000023141) #27	ENSCHYG00000025300	LURAP1L (ENSCHYG00000025308) #29	TYRP1 (ENSCHYG00000025323) #30	ENSCHYG00000025365	ENSCHYG00000025372	ENSCHYG00000025381	ENSCHYG00000025418	PTPRD (ENSCHYG00000025507) #31	DMAC1 (ENSCHYG00000025835) #32	KDM4C (ENSCHYG00000025863) #35	ENSCHYG00000025980
Camelidae	ANCESTRAL SPECIES	5	ENSGT00390000009819.a.b.a.a.b.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970.j #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000167431	ENSGT00390000011483	ENSGT00390000009531
Alpaca	MODERN SPECIES	2814											CCDC171 (ENSVPAG00000005825) #14	PSIP1 (ENSVPAG00000005824) #16	SNAPC3 (ENSVPAG00000005822) #17	TTC39B (ENSVPAG00000005821) #18	FREM1 (ENSVPAG00000005812) #21	ENSVPAG00000005810 #22	ZDHHC21 (ENSVPAG00000005809) #23	NFIB (ENSVPAG00000005804) #24	ENSVPAG00000005802
Arabian camel	MODERN SPECIES	30	PLIN2 (ENSCDRG00005000820)	HAUS6 (ENSCDRG00005000742)	RRAGA (ENSCDRG00005000730)	SAXO1 (ENSCDRG00005000701) #7	ENSCDRG00005000592 #9	ENSCDRG00005000656 #9	SH3GL2 (ENSCDRG00005000538) #10	CNTLN (ENSCDRG00005000497) #11	BNC2 (ENSCDRG00005000440) #12	CCDC171 (ENSCDRG00005000197) #14	PSIP1 (ENSCDRG00005000111) #16	SNAPC3 (ENSCDRG00005016654) #17	TTC39B (ENSCDRG00005016086) #18	ENSCDRG00005016048	FREM1 (ENSCDRG00005015719) #21	CER1 (ENSCDRG00005015672) #22	ZDHHC21 (ENSCDRG00005015597) #23	NFIB (ENSCDRG00005014901) #24	MPDZ (ENSCDRG00005006456) #27	LURAP1L (ENSCDRG00005006202) #29	TYRP1 (ENSCDRG00005006115) #30	ENSCDRG00005006094	ENSCDRG00005006083	PTPRD (ENSCDRG00005005639) #31	DMAC1 (ENSCDRG00005005564) #32	KDM4C (ENSCDRG00005005441) #35	GLDC (ENSCDRG00005005386) #37	UHRF2 (ENSCDRG00005005328)	TPD52L3 (ENSCDRG00005005309)	IL33 (ENSCDRG00005005282)	ENSCDRG00005005267
Atlantogenata	ANCESTRAL SPECIES	68	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT01030000235123	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531
Xenarthra	ANCESTRAL SPECIES	691											ENSGT01030000235123	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23
Sloth	MODERN SPECIES	9757																ENSCHOG00000001850 #22
Armadillo	MODERN SPECIES	2132										ENSDNOG00000041275	PSIP1 (ENSDNOG00000012311) #16	SNAPC3 (ENSDNOG00000012296) #17	ENSDNOG00000035764 #18	ENSDNOG00000048292	FREM1 (ENSDNOG00000007689) #21	CER1 (ENSDNOG00000015103) #22	ZDHHC21 (ENSDNOG00000014053) #23
Afrotheria	ANCESTRAL SPECIES	116	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839
Afrotheria_a	ANCESTRAL SPECIES	118	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00950000183031.B.e.b	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.b.a #18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00940000163110	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839
Elephant	MODERN SPECIES	472	HAUS6 (ENSLAFG00000011084)	RRAGA (ENSLAFG00000011082)	SAXO1 (ENSLAFG00000011081) #7	ADAMTSL1 (ENSLAFG00000011076) #9	SH3GL2 (ENSLAFG00000005475) #10	CNTLN (ENSLAFG00000007075) #11	ENSLAFG00000027513	ENSLAFG00000021349	BNC2 (ENSLAFG00000000476) #12	CCDC171 (ENSLAFG00000013490) #14	PSIP1 (ENSLAFG00000013878) #16	SNAPC3 (ENSLAFG00000013869) #17	TTC39B (ENSLAFG00000013786) #18	ENSLAFG00000028826	FREM1 (ENSLAFG00000008954) #21	CER1 (ENSLAFG00000014736) #22	ZDHHC21 (ENSLAFG00000008950) #23	NFIB (ENSLAFG00000000868) #24	MPDZ (ENSLAFG00000018210) #27	LURAP1L (ENSLAFG00000001902) #29	TYRP1 (ENSLAFG00000001901) #30	ENSLAFG00000027855 ##15	PTPRD (ENSLAFG00000017308) #31	DMAC1 (ENSLAFG00000012977) #32	KDM4C (ENSLAFG00000013829) #35	GLDC (ENSLAFG00000000430) #37	UHRF2 (ENSLAFG00000000669)	ENSLAFG00000022756	ENSLAFG00000007786	RANBP6 (ENSLAFG00000002055)	ENSLAFG00000031413
Tenrec	MODERN SPECIES	8917															FREM1 (ENSETEG00000015868) #21	CER1 (ENSETEG00000015864) #22	ZDHHC21 (ENSETEG00000015862) #23
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.i #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.i #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Diprotodontia	ANCESTRAL SPECIES	19	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.i #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Diprotodontia_a	ANCESTRAL SPECIES	21	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.i #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00390000003343 #32	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
koala	MODERN SPECIES	194									BNC2 (ENSPCIG00000020267) #12	CCDC171 (ENSPCIG00000015388) #14	ENSPCIG00000015377 #16	SNAPC3 (ENSPCIG00000015370) #17	TTC39B (ENSPCIG00000001439) ##18	ENSPCIG00000001394 #21	ENSPCIG00000036223 #21	ENSPCIG00000001306 #22	ZDHHC21 (ENSPCIG00000001282) #23	NFIB (ENSPCIG00000001226) #24	MPDZ (ENSPCIG00000025013) #27	LURAP1L (ENSPCIG00000015005) #29	ENSPCIG00000014999 #30	ENSPCIG00000036977 #30
Common wonbat	MODERN SPECIES	1009	FKTN (ENSVURG00010003506)	ENSVURG00010003512	FSD1L (ENSVURG00010003544)	PLIN2 (ENSVURG00010003566)	ENSVURG00010003577	SAXO1 (ENSVURG00010003626) #7	ADAMTSL1 (ENSVURG00010003657) #9	ENSVURG00010003708	ENSVURG00010003793 #11	BNC2 (ENSVURG00010003913) #12	CCDC171 (ENSVURG00010004058) #14	PSIP1 (ENSVURG00010004263) #16	SNAPC3 (ENSVURG00010004305) #17	ENSVURG00010004353 ##18	FREM1 (ENSVURG00010004450) #21	ENSVURG00010004561 #22	ZDHHC21 (ENSVURG00010004573) #23	NFIB (ENSVURG00010004715) #24	MPDZ (ENSVURG00010005019) #27	LURAP1L (ENSVURG00010005429) #29	TYRP1 (ENSVURG00010005433) #30	ENSVURG00010005463	PTPRD (ENSVURG00010005527) #31	ENSVURG00010005615 #32	KDM4C (ENSVURG00010005641) #35	GLDC (ENSVURG00010005739) #37	UHRF2 (ENSVURG00010006652)	KIAA2026 (ENSVURG00010006687)	MLANA (ENSVURG00010006707)	ERMP1 (ENSVURG00010006720)	RIC1 (ENSVURG00010006750)
Tasmanian devil	MODERN SPECIES		FKTN (ENSSHAG00000027158)	ENSSHAG00000015134	ENSSHAG00000014793	ENSSHAG00000014655	SAXO1 (ENSSHAG00000014231) #7	ENSSHAG00000027232 #9	ENSSHAG00000012335 #9	SH3GL2 (ENSSHAG00000005065) #10	ENSSHAG00000013537 #11	BNC2 (ENSSHAG00000030577) #12	CCDC171 (ENSSHAG00000018094) #14	ENSSHAG00000018023 #16	SNAPC3 (ENSSHAG00000030080) #17	ENSSHAG00000017713 ##18	FREM1 (ENSSHAG00000017309) #21	CER1 (ENSSHAG00000017268) #22	ZDHHC21 (ENSSHAG00000021164) #23	NFIB (ENSSHAG00000030287) #24	MPDZ (ENSSHAG00000010824) #27	LURAP1L (ENSSHAG00000008457) #29	TYRP1 (ENSSHAG00000007505) #30	ENSSHAG00000022556	PTPRD (ENSSHAG00000026330) #31	ENSSHAG00000026724	ENSSHAG00000027331 #32	KDM4C (ENSSHAG00000008668) #35	GLDC (ENSSHAG00000005373) #37	UHRF2 (ENSSHAG00000023237)	ENSSHAG00000031943	KIAA2026 (ENSSHAG00000030776)	MLANA (ENSSHAG00000006138)
Opossum	MODERN SPECIES	5	SAXO1 (ENSMODG00000014676) #7	ADAMTSL1 (ENSMODG00000014683) #9	ENSMODG00000027395	SH3GL2 (ENSMODG00000014850) #10	ENSMODG00000040062	ENSMODG00000014860 #11	ENSMODG00000046892	BNC2 (ENSMODG00000014900) #12	ENSMODG00000050120	ENSMODG00000044025	CCDC171 (ENSMODG00000014913) #14	PSIP1 (ENSMODG00000014943) #16	SNAPC3 (ENSMODG00000014956) #17	ENSMODG00000014967 ##18	FREM1 (ENSMODG00000014986) #21	CER1 (ENSMODG00000014991) #22	ZDHHC21 (ENSMODG00000014993) #23	NFIB (ENSMODG00000014999) #24	ENSMODG00000048502 #27	ENSMODG00000015042 #27	LURAP1L (ENSMODG00000015046) #29	TYRP1 (ENSMODG00000015054) #30	ENSMODG00000045399	ENSMODG00000015085	ENSMODG00000043064	PTPRD (ENSMODG00000015192) #31	ENSMODG00000047379	ENSMODG00000015205 #32	ENSMODG00000022955	KDM4C (ENSMODG00000015213) #35	GLDC (ENSMODG00000015225) #37
Sauria	ANCESTRAL SPECIES	5	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00990000204039	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430
Episquamata	ANCESTRAL SPECIES	6	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00390000000375
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00390000000375
Elapidae	ANCESTRAL SPECIES	7	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243.k #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b.c #12	ENSGT01060000248998	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT01010000229860	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00530000063839.f	ENSGT00390000002955	ENSGT00940000161373	ENSGT00390000000375
Elapidae_a	ANCESTRAL SPECIES	101																ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT01010000229860	ENSGT00940000154930.a #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00530000063839.f	ENSGT00390000002955	ENSGT00940000161373	ENSGT00390000000375
Acanthophiinae	ANCESTRAL SPECIES	9																ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT01010000229860	ENSGT00940000154930.a #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00530000063839.f	ENSGT00390000002955	ENSGT00940000161373	ENSGT00390000000375
Mainland tiger snake	MODERN SPECIES	1																CER1 (ENSNSUG00000020112) #22	ZDHHC21 (ENSNSUG00000020111) #23	NFIB (ENSNSUG00000020094) #24	MPDZ (ENSNSUG00000020067) #27	LURAP1L (ENSNSUG00000020056) #29	TYRP1 (ENSNSUG00000020055) #30	PTPRD (ENSNSUG00000020025) #31	ENSNSUG00000020021	KDM4C (ENSNSUG00000019947) #35	GLDC (ENSNSUG00000019946) #37	UHRF2 (ENSNSUG00000019944)	KIAA2026 (ENSNSUG00000019940)	ENSNSUG00000019939	ENSNSUG00000019938	RIC1 (ENSNSUG00000019937)	PDCD1LG2 (ENSNSUG00000019936)
Eastern brown snake	MODERN SPECIES	106																CER1 (ENSPTXG00000017233) #22	ZDHHC21 (ENSPTXG00000017234) #23	NFIB (ENSPTXG00000017239) #24	MPDZ (ENSPTXG00000017313) #27	LURAP1L (ENSPTXG00000018633) #29	TYRP1 (ENSPTXG00000018634) #30
Blue-lipped sea krait	MODERN SPECIES	2574																ENSLLTG00000002092 #22	ZDHHC21 (ENSLLTG00000002085) #23
Indian cobra	MODERN SPECIES	1	DENND4C (ENSNNAG00000010308)	PLIN2 (ENSNNAG00000010835)	HAUS6 (ENSNNAG00000010895)	SAXO1 (ENSNNAG00000011242) #7	ENSNNAG00000011280 #9	ENSNNAG00000011353 #9	ENSNNAG00000011422	CNTLN (ENSNNAG00000011473) #11	BNC2 (ENSNNAG00000011632) #12	ENSNNAG00000011700	CCDC171 (ENSNNAG00000011728) #14	PSIP1 (ENSNNAG00000011885) #16	SNAPC3 (ENSNNAG00000011912) #17	TTC39B (ENSNNAG00000011968) ##18	FREM1 (ENSNNAG00000012141) #21	CER1 (ENSNNAG00000012247) #22	ZDHHC21 (ENSNNAG00000012263) #23	ENSNNAG00000012307 #24	ENSNNAG00000012327 #24	ENSNNAG00000012358 #27	ENSNNAG00000012381 #27	ENSNNAG00000012517 #30	ENSNNAG00000012559 #30	PTPRD (ENSNNAG00000012603) #31	ENSNNAG00000013031	KDM4C (ENSNNAG00000013058) #35	GLDC (ENSNNAG00000013176) #37	UHRF2 (ENSNNAG00000013890)	KIAA2026 (ENSNNAG00000014777)	ERMP1 (ENSNNAG00000014841)	RIC1 (ENSNNAG00000015205)
Lizard	MODERN SPECIES	1	SHC3 (ENSACAG00000026454)	CKS2 (ENSACAG00000016581)	ENSACAG00000045311	ENSACAG00000042754	SEMA4D (ENSACAG00000016619)	ENSACAG00000041237	ENSACAG00000017719	CNTLN (ENSACAG00000017738) #11	BNC2 (ENSACAG00000017743) #12	ENSACAG00000042042	CCDC171 (ENSACAG00000017752) #14	ENSACAG00000017757 #16	SNAPC3 (ENSACAG00000017765) #17	TTC39B (ENSACAG00000017770) ##18	FREM1 (ENSACAG00000017780) #21	CER1 (ENSACAG00000017792) #22	ZDHHC21 (ENSACAG00000017794) #23	NFIB (ENSACAG00000017798) #24	ENSACAG00000042712	MPDZ (ENSACAG00000011304) #27	LURAP1L (ENSACAG00000042509) #29	TYRP1 (ENSACAG00000011322) #30	ENSACAG00000035420	DIRAS2 (ENSACAG00000000763)	SYK (ENSACAG00000000768)	ENSACAG00000037605	ENSACAG00000035309	ENSACAG00000044268	NFIL3 (ENSACAG00000000915)	ENSACAG00000043875	ROR2 (ENSACAG00000000922)
Laterata	ANCESTRAL SPECIES	7	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00390000000375
Common wall lizard	MODERN SPECIES	8	SNX30 (ENSPMRG00000016835)	ENSPMRG00000016852	KIAA1958 (ENSPMRG00000016860)	ENSPMRG00000016864	HSDL2 (ENSPMRG00000016872)	PTBP3 (ENSPMRG00000016883)	SUSD1 (ENSPMRG00000016911)	ENSPMRG00000016917	UGCG (ENSPMRG00000016919)	GNG10 (ENSPMRG00000016923)	DNAJC25 (ENSPMRG00000016927)	ECPAS (ENSPMRG00000016941)	LINGO2 (ENSPMRG00000017007)	ENSPMRG00000017010	FREM1 (ENSPMRG00000017029) #21	CER1 (ENSPMRG00000017086) #22	ZDHHC21 (ENSPMRG00000017089) #23	NFIB (ENSPMRG00000017099) #24	ENSPMRG00000017112	MPDZ (ENSPMRG00000017560) #27	LURAP1L (ENSPMRG00000020592) #29	TYRP1 (ENSPMRG00000020595) #30	ENSPMRG00000020605	PTPRD (ENSPMRG00000020631) #31	ENSPMRG00000020725	KDM4C (ENSPMRG00000020731) #35	GLDC (ENSPMRG00000020751) #37	UHRF2 (ENSPMRG00000020766)	KIAA2026 (ENSPMRG00000020779)	MLANA (ENSPMRG00000020786)	ERMP1 (ENSPMRG00000020796)
Argentine black and white tegu	MODERN SPECIES	55			PLIN2 (ENSSMRG00000007197)	HAUS6 (ENSSMRG00000007188)	SAXO1 (ENSSMRG00000007183) #7	ADAMTSL1 (ENSSMRG00000007171) #9	ENSSMRG00000007139	CNTLN (ENSSMRG00000007110) #11	BNC2 (ENSSMRG00000007090) #12	ENSSMRG00000007076	CCDC171 (ENSSMRG00000007041) #14	PSIP1 (ENSSMRG00000007008) #16	SNAPC3 (ENSSMRG00000007002) #17	TTC39B (ENSSMRG00000006972) ##18	FREM1 (ENSSMRG00000006915) #21	CER1 (ENSSMRG00000006900) #22	ZDHHC21 (ENSSMRG00000006897) #23	ENSSMRG00000006894	NFIB (ENSSMRG00000006870) #24	MPDZ (ENSSMRG00000006736) #27	LURAP1L (ENSSMRG00000006726) #29	TYRP1 (ENSSMRG00000006715) #30	ENSSMRG00000006709	PTPRD (ENSSMRG00000006679) #31	KDM4C (ENSSMRG00000006595) #35	ENSSMRG00000006563	GLDC (ENSSMRG00000006545) #37	UHRF2 (ENSSMRG00000006533)	DENND4C (ENSSMRG00000006507)	ENSSMRG00000006495	ACER2 (ENSSMRG00000006492)
tuatara	MODERN SPECIES	1085								ENSSPUG00000010110	ENSSPUG00000010126	ENSSPUG00000010136	PSIP1 (ENSSPUG00000010151) #16	SNAPC3 (ENSSPUG00000010167) #17	TTC39B (ENSSPUG00000010180) ##18	ENSSPUG00000010201 #21	ENSSPUG00000010230 #21	CER1 (ENSSPUG00000010245) #22	ZDHHC21 (ENSSPUG00000010263) #23	NFIB (ENSSPUG00000010319) #24	MPDZ (ENSSPUG00000010621) #27	LURAP1L (ENSSPUG00000010690) #29	TYRP1 (ENSSPUG00000010705) #30
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00990000204039	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Archosauria	ANCESTRAL SPECIES	31	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Aves	ANCESTRAL SPECIES	45	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Neognathae	ANCESTRAL SPECIES	12	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Anatidae	ANCESTRAL SPECIES	103									ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30
Pink-footed goose	MODERN SPECIES	231															FREM1 (ENSABRG00000018044) #21	CER1 (ENSABRG00000018026) #22	ZDHHC21 (ENSABRG00000018017) #23	NFIB (ENSABRG00000018011) #24	MPDZ (ENSABRG00000016173) #27	LURAP1L (ENSABRG00000016027) #29	TYRP1 (ENSABRG00000016017) #30
Duck	MODERN SPECIES	4281	ENSAPLG00000003923	MLANA (ENSAPLG00000003877)	KIAA2026 (ENSAPLG00000003748)	UHRF2 (ENSAPLG00000013042)	GLDC (ENSAPLG00000012359) #37	KDM4C (ENSAPLG00000012301) #35	ENSAPLG00000023506	PTPRD (ENSAPLG00000012170) #31	BNC2 (ENSAPLG00000008295) #12	ENSAPLG00000019687	CCDC171 (ENSAPLG00000011943) #14	PSIP1 (ENSAPLG00000011966) #16	SNAPC3 (ENSAPLG00000024309) #17	TTC39B (ENSAPLG00000012421) ##18	FREM1 (ENSAPLG00000012801) #21	CER1 (ENSAPLG00000013182) #22	ZDHHC21 (ENSAPLG00000013190) #23	NFIB (ENSAPLG00000013233) #24	ENSAPLG00000022322	ENSAPLG00000018925	MPDZ (ENSAPLG00000013686) #27	LURAP1L (ENSAPLG00000011742) #29	TYRP1 (ENSAPLG00000013453) #30	ENSAPLG00000020249	CNTLN (ENSAPLG00000007696) #11	SH3GL2 (ENSAPLG00000007190) #10	ENSAPLG00000006616 #9	ENSAPLG00000025052	ENSAPLG00000006493 #9	SAXO1 (ENSAPLG00000006403) #7	HAUS6 (ENSAPLG00000006057)
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B.jb #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT01060000248998	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B.jb #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Chicken	MODERN SPECIES	131	DENND4C (ENSGALG00010016305)	PLIN2 (ENSGALG00010016168)	HAUS6 (ENSGALG00010016114)	ENSGALG00010016080	SAXO1 (ENSGALG00010016073) #7	ADAMTSL1 (ENSGALG00010016043) #9	SH3GL2 (ENSGALG00010014197)	CNTLN (ENSGALG00010016566) #11	BNC2 (ENSGALG00010016535) #12	ENSGALG00010014439	CCDC171 (ENSGALG00010014372) #14	ENSGALG00010014049	PSIP1 (ENSGALG00010014035) #16	TTC39B (ENSGALG00010016468) ##18	FREM1 (ENSGALG00010016463) #21	CER1 (ENSGALG00010016448) #22	ZDHHC21 (ENSGALG00010016445) #23	NFIB (ENSGALG00010016418) #24	MPDZ (ENSGALG00010016251) #27	LURAP1L (ENSGALG00010016139) #29	TYRP1 (ENSGALG00010014092) #30	ENSGALG00010015966	PTPRD (ENSGALG00010012063) #31	KDM4C (ENSGALG00010011253) #35	GLDC (ENSGALG00010012973) #37	UHRF2 (ENSGALG00010012965)	KIAA2026 (ENSGALG00010012952)	MLANA (ENSGALG00010012923)	ENSGALG00010012919	ERMP1 (ENSGALG00010012904)	RIC1 (ENSGALG00010012889)
Turkey	MODERN SPECIES	1299	ACER2 (ENSMGAG00000022816)	ENSMGAG00000005604	DENND4C (ENSMGAG00000005660)	PLIN2 (ENSMGAG00000005633)	HAUS6 (ENSMGAG00000020188)	SAXO1 (ENSMGAG00000005655) #7	ADAMTSL1 (ENSMGAG00000016070) #9	ENSMGAG00000020884	ENSMGAG00000008992	BNC2 (ENSMGAG00000021479) #12	ENSMGAG00000022161	CCDC171 (ENSMGAG00000020518) #14	PSIP1 (ENSMGAG00000005593) #16	ENSMGAG00000018925	ENSMGAG00000016461 #23	CER1 (ENSMGAG00000005651) #22	FREM1 (ENSMGAG00000004727) #21	ENSMGAG00000007634 #24	ENSMGAG00000016941 #24	MPDZ (ENSMGAG00000019675) #27	TYRP1 (ENSMGAG00000005517) #30	PTPRD (ENSMGAG00000016387) #31	ENSMGAG00000003348 #35	GLDC (ENSMGAG00000009587) #37	UHRF2 (ENSMGAG00000007128)	KIAA2026 (ENSMGAG00000021166)	MLANA (ENSMGAG00000005363)	ENSMGAG00000005367	ERMP1 (ENSMGAG00000005374)	RIC1 (ENSMGAG00000005427)	PDCD1LG2 (ENSMGAG00000020864)
Japanese quail	MODERN SPECIES	699	UHRF2 (ENSCJPG00005003255)	GLDC (ENSCJPG00005003257) #37	ENSCJPG00005003260 #35	ENSCJPG00005003265 #35	PTPRD (ENSCJPG00005003278) #31	ENSCJPG00005003285	ENSCJPG00005003289	TYRP1 (ENSCJPG00005003297) #30	LURAP1L (ENSCJPG00005003298) #29	ENSCJPG00005003394 #27	NFIB (ENSCJPG00005007386) #24	CCDC171 (ENSCJPG00005007404) #14	PSIP1 (ENSCJPG00005007411) #16	TTC39B (ENSCJPG00005007562) ##18	FREM1 (ENSCJPG00005007571) #21	CER1 (ENSCJPG00005007574) #22	ZDHHC21 (ENSCJPG00005007576) #23	ENSCJPG00005007601 #24	BNC2 (ENSCJPG00005007620) #12	CNTLN (ENSCJPG00005007635) #11	SH3GL2 (ENSCJPG00005007638) #10	ADAMTSL1 (ENSCJPG00005007653) #9	SAXO1 (ENSCJPG00005007663) #7	HAUS6 (ENSCJPG00005007664)	PLIN2 (ENSCJPG00005007666)	DENND4C (ENSCJPG00005007667)	ENSCJPG00005007668	ACER2 (ENSCJPG00005007671)	SLC24A2 (ENSCJPG00005007673)	MLLT3 (ENSCJPG00005007680)	FOCAD (ENSCJPG00005007688)
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Kakapo	MODERN SPECIES	19	DENND4C (ENSSHBG00005020049)	PLIN2 (ENSSHBG00005020060)	HAUS6 (ENSSHBG00005020065)	SAXO1 (ENSSHBG00005020075) #7	ENSSHBG00005020078 #9	ENSSHBG00005020084 #9	SH3GL2 (ENSSHBG00005020088) #10	ENSSHBG00005020091	CNTLN (ENSSHBG00005020093) #11	BNC2 (ENSSHBG00005020107) #12	CCDC171 (ENSSHBG00005020113) #14	PSIP1 (ENSSHBG00005020122) #16	SNAPC3 (ENSSHBG00005020126) #17	TTC39B (ENSSHBG00005020149) ##18	FREM1 (ENSSHBG00005020181) #21	CER1 (ENSSHBG00005020194) #22	ZDHHC21 (ENSSHBG00005020195) #23	NFIB (ENSSHBG00005000187) #24	ENSSHBG00005000194 #24	MPDZ (ENSSHBG00005003173) #27	LURAP1L (ENSSHBG00005017290) #29	TYRP1 (ENSSHBG00005017292) #30	PTPRD (ENSSHBG00005017319) #31	ENSSHBG00005017356 #35	ENSSHBG00005017358 #35	GLDC (ENSSHBG00005017361) #37	UHRF2 (ENSSHBG00005017370)	KIAA2026 (ENSSHBG00005017376)	MLANA (ENSSHBG00005017380)	ENSSHBG00005017383	ERMP1 (ENSSHBG00005017385)
Golden eagle	MODERN SPECIES	91	PLIN2 (ENSACCG00020012024)	HAUS6 (ENSACCG00020012087)	SAXO1 (ENSACCG00020012163) #7	ADAMTSL1 (ENSACCG00020012441) #9	ENSACCG00020012754	ENSACCG00020012769	SH3GL2 (ENSACCG00020012786) #10	CNTLN (ENSACCG00020012818) #11	CCDC171 (ENSACCG00020012923) #14	PSIP1 (ENSACCG00020012989) #16	SNAPC3 (ENSACCG00020013010) #17	ENSACCG00020013032	TTC39B (ENSACCG00020013080) ##18	ENSACCG00020013134 #21	ENSACCG00020013168 #21	CER1 (ENSACCG00020013190) #22	ZDHHC21 (ENSACCG00020013214) #23	NFIB (ENSACCG00020013265) #24	MPDZ (ENSACCG00020013493) #27	LURAP1L (ENSACCG00020013735) #29	TYRP1 (ENSACCG00020013748) #30	ENSACCG00020013752	PTPRD (ENSACCG00020013775) #31	KDM4C (ENSACCG00020013865) #35	GLDC (ENSACCG00020013912) #37	UHRF2 (ENSACCG00020013943)	KIAA2026 (ENSACCG00020013976)	MLANA (ENSACCG00020013991)	ENSACCG00020014001	ERMP1 (ENSACCG00020014143)	RIC1 (ENSACCG00020014383)
Passeriformes	ANCESTRAL SPECIES	7	ENSGT01030000234532.B.e.a	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Great tit	MODERN SPECIES	642	ACER2 (ENSPMJG00000017701)	ENSPMJG00000017700	DENND4C (ENSPMJG00000017699)	PLIN2 (ENSPMJG00000017698)	HAUS6 (ENSPMJG00000017696)	ENSPMJG00000017695	ADAMTSL1 (ENSPMJG00000017694) #9	SH3GL2 (ENSPMJG00000017693) #10	ENSPMJG00000017688	BNC2 (ENSPMJG00000017687) #12	CCDC171 (ENSPMJG00000017668) #14	PSIP1 (ENSPMJG00000017666) #16	SNAPC3 (ENSPMJG00000017665) #17	TTC39B (ENSPMJG00000017664) ##18	FREM1 (ENSPMJG00000017644) #21	CER1 (ENSPMJG00000017643) #22	ZDHHC21 (ENSPMJG00000017642) #23	NFIB (ENSPMJG00000017641) #24	MPDZ (ENSPMJG00000016245) #27	LURAP1L (ENSPMJG00000016242) #29	TYRP1 (ENSPMJG00000016241) #30	PTPRD (ENSPMJG00000016234) #31	ENSPMJG00000016233	KDM4C (ENSPMJG00000016232) #35	GLDC (ENSPMJG00000016231) #37	UHRF2 (ENSPMJG00000016230)	KIAA2026 (ENSPMJG00000016228)	MLANA (ENSPMJG00000016227)	ENSPMJG00000016226	ERMP1 (ENSPMJG00000016217)	RIC1 (ENSPMJG00000016216)
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT01030000234532.B.e.a	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT01030000234532.B.e.a	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Passeroidea	ANCESTRAL SPECIES	23	ENSGT01030000234532.B.e.a	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT00390000009531	ENSGT00940000164450	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373
Zebra finch	MODERN SPECIES	104	SLC24A2 (ENSTGUG00000004321)	ACER2 (ENSTGUG00000019762)	ENSTGUG00000004334	DENND4C (ENSTGUG00000004350)	PLIN2 (ENSTGUG00000004399)	HAUS6 (ENSTGUG00000026672)	ADAMTSL1 (ENSTGUG00000004435) #9	SH3GL2 (ENSTGUG00000004460) #10	ENSTGUG00000025732 #11	BNC2 (ENSTGUG00000004482) #12	ENSTGUG00000004492	PSIP1 (ENSTGUG00000004519) #16	SNAPC3 (ENSTGUG00000004548) #17	TTC39B (ENSTGUG00000004554) ##18	FREM1 (ENSTGUG00000004583) #21	CER1 (ENSTGUG00000004618) #22	ZDHHC21 (ENSTGUG00000029727) #23	NFIB (ENSTGUG00000004639) #24	MPDZ (ENSTGUG00000004679) #27	LURAP1L (ENSTGUG00000004701) #29	TYRP1 (ENSTGUG00000004704) #30	PTPRD (ENSTGUG00000004740) #31	ENSTGUG00000019018	KDM4C (ENSTGUG00000004875) #35	GLDC (ENSTGUG00000004885) #37	UHRF2 (ENSTGUG00000004941)	KIAA2026 (ENSTGUG00000004976)	MLANA (ENSTGUG00000025611)	ENSTGUG00000004979	ERMP1 (ENSTGUG00000004990)	RIC1 (ENSTGUG00000005013)
Common canary	MODERN SPECIES	25	MLLT3 (ENSSCAG00000001419)	SLC24A2 (ENSSCAG00000001432)	ACER2 (ENSSCAG00000001442)	ENSSCAG00000001449	DENND4C (ENSSCAG00000001467)	PLIN2 (ENSSCAG00000001499)	HAUS6 (ENSSCAG00000001512)	ADAMTSL1 (ENSSCAG00000001544) #9	SH3GL2 (ENSSCAG00000001580) #10	BNC2 (ENSSCAG00000001590) #12	CCDC171 (ENSSCAG00000001614) #14	PSIP1 (ENSSCAG00000001649) #16	SNAPC3 (ENSSCAG00000001672) #17	TTC39B (ENSSCAG00000001680) ##18	FREM1 (ENSSCAG00000001715) #21	CER1 (ENSSCAG00000001779) #22	ZDHHC21 (ENSSCAG00000001780) #23	NFIB (ENSSCAG00000001799) #24	MPDZ (ENSSCAG00000001857) #27	TYRP1 (ENSSCAG00000001949) #30	PTPRD (ENSSCAG00000002170) #31	ENSSCAG00000003109 #35	ENSSCAG00000003133	ENSSCAG00000003143	PUM3 (ENSSCAG00000003162)	KCNV2 (ENSSCAG00000003167)	VLDLR (ENSSCAG00000003171)	SMARCA2 (ENSSCAG00000003181)	DMRT2 (ENSSCAG00000003191)	DMRT3 (ENSSCAG00000003195)	DMRT1 (ENSSCAG00000003198)
Medium ground finch	MODERN SPECIES	26	DENND4C (ENSGFOG00000008426)	PLIN2 (ENSGFOG00000008562)	HAUS6 (ENSGFOG00000008571)	ADAMTSL1 (ENSGFOG00000008592) #9	SH3GL2 (ENSGFOG00000008649) #10	ENSGFOG00000008670 #11	BNC2 (ENSGFOG00000008686) #12	ENSGFOG00000008696	ENSGFOG00000008702	ENSGFOG00000008704	PSIP1 (ENSGFOG00000008711) #16	SNAPC3 (ENSGFOG00000008717) #17	ENSGFOG00000008725	TTC39B (ENSGFOG00000008729) ##18	FREM1 (ENSGFOG00000008747) #21	CER1 (ENSGFOG00000005820) #22	ZDHHC21 (ENSGFOG00000005822) #23	NFIB (ENSGFOG00000005834) #24	MPDZ (ENSGFOG00000005978) #27	TYRP1 (ENSGFOG00000008774) #30
Flycatcher	MODERN SPECIES	243											CCDC171 (ENSFALG00000006548) #14	PSIP1 (ENSFALG00000006534) #16	SNAPC3 (ENSFALG00000006520) #17	TTC39B (ENSFALG00000006508) ##18	FREM1 (ENSFALG00000006476) #21	CER1 (ENSFALG00000006452) #22	ZDHHC21 (ENSFALG00000006448) #23	NFIB (ENSFALG00000006420) #24	MPDZ (ENSFALG00000006399) #27	TYRP1 (ENSFALG00000006385) #30	PTPRD (ENSFALG00000006309) #31
African ostrich	MODERN SPECIES	761	OTOP3 (ENSSCUG00000011409)	HID1 (ENSSCUG00000011406)	CDR2L (ENSSCUG00000011404)	MRPL58 (ENSSCUG00000011403)	ENSSCUG00000011402	ATP5PD (ENSSCUG00000011401) #25	ENSSCUG00000011400	ENSSCUG00000011397	SLC16A5 (ENSSCUG00000011396)	BNC2 (ENSSCUG00000011395) #12	CCDC171 (ENSSCUG00000011386) #14	ENSSCUG00000011376 #16	SNAPC3 (ENSSCUG00000011373) #17	TTC39B (ENSSCUG00000011367) ##18	FREM1 (ENSSCUG00000011356) #21	CER1 (ENSSCUG00000011351) #22	ZDHHC21 (ENSSCUG00000011348) #23	ENSSCUG00000011346 #24
Australian saltwater crocodile	MODERN SPECIES	67	ACER2 (ENSCPRG00005000407)	ENSCPRG00005000421	DENND4C (ENSCPRG00005000460)	PLIN2 (ENSCPRG00005000506)	HAUS6 (ENSCPRG00005000520)	SAXO1 (ENSCPRG00005000531) #7	ADAMTSL1 (ENSCPRG00005000579) #9	SH3GL2 (ENSCPRG00005000664) #10	CNTLN (ENSCPRG00005000737) #11	BNC2 (ENSCPRG00005000801) #12	CCDC171 (ENSCPRG00005000836) #14	PSIP1 (ENSCPRG00005000896) #16	SNAPC3 (ENSCPRG00005001022) #17	TTC39B (ENSCPRG00005001076) ##18	FREM1 (ENSCPRG00005001239) #21	CER1 (ENSCPRG00005001332) #22	ZDHHC21 (ENSCPRG00005001339) #23	NFIB (ENSCPRG00005001399) #24	MPDZ (ENSCPRG00005001670) #27	LURAP1L (ENSCPRG00005003737) #29	TYRP1 (ENSCPRG00005003740) #30	PTPRD (ENSCPRG00005003783) #31	KDM4C (ENSCPRG00005003854) #35	GLDC (ENSCPRG00005003953) #37	UHRF2 (ENSCPRG00005004283)	KIAA2026 (ENSCPRG00005004297)	ERMP1 (ENSCPRG00005004304)	RIC1 (ENSCPRG00005004338)	PDCD1LG2 (ENSCPRG00005004350)	ENSCPRG00005004356	PLGRKT (ENSCPRG00005004366)
Cryptodira	ANCESTRAL SPECIES	63	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000160529 #10	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706 #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00990000204039	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970 #37	ENSGT00390000008296.b.a.a
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.d #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00990000204039	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970.g #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT01000000214430.c.b.b.a	ENSGT00950000182991.B	ENSGT00940000163078.b	ENSGT00940000163078.a	ENSGT00940000160640.a
Emydidae	ANCESTRAL SPECIES	20	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00950000185213	ENSGT00940000156243 #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.d #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00990000204039	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970.g #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT01000000214430.c.b.b.a	ENSGT01000000214430.c.b.b.b.a	ENSGT00950000182991.B	ENSGT00940000163078.b	ENSGT00940000163078.a
Three-toed box turtle	MODERN SPECIES	50	DENND4C (ENSTMTG00000017478)	PLIN2 (ENSTMTG00000017440)	HAUS6 (ENSTMTG00000017410)	SAXO1 (ENSTMTG00000017388) #7	ENSTMTG00000017369	ENSTMTG00000017350 #9	ENSTMTG00000017328 #9	ENSTMTG00000017184	CNTLN (ENSTMTG00000017115) #11	BNC2 (ENSTMTG00000017070) #12	CCDC171 (ENSTMTG00000017030) #14	PSIP1 (ENSTMTG00000016979) #16	SNAPC3 (ENSTMTG00000016962) #17	TTC39B (ENSTMTG00000016892) ##18	FREM1 (ENSTMTG00000016635) #21	CER1 (ENSTMTG00000016605) #22	ZDHHC21 (ENSTMTG00000016592) #23	NFIB (ENSTMTG00000016530) #24	MPDZ (ENSTMTG00000016407) #27	LURAP1L (ENSTMTG00000016380) #29	TYRP1 (ENSTMTG00000016362) #30
painted turtle	MODERN SPECIES	717								CNTLN (ENSCPBG00000025262) #11	BNC2 (ENSCPBG00000025268) #12	CCDC171 (ENSCPBG00000025280) #14	PSIP1 (ENSCPBG00000025305) #16	SNAPC3 (ENSCPBG00000025310) #17	TTC39B (ENSCPBG00000025312) ##18	ENSCPBG00000025328	FREM1 (ENSCPBG00000025334) #21	CER1 (ENSCPBG00000025348) #22	ZDHHC21 (ENSCPBG00000025350) #23	NFIB (ENSCPBG00000025357) #24	MPDZ (ENSCPBG00000025406) #27	LURAP1L (ENSCPBG00000026161) #29	TYRP1 (ENSCPBG00000026162) #30	PTPRD (ENSCPBG00000026171) #31	KDM4C (ENSCPBG00000026174) #35	GLDC (ENSCPBG00000026175) #37	UHRF2 (ENSCPBG00000026176)	KIAA2026 (ENSCPBG00000000133)
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00730000110920.b.a.b	ENSGT00390000009819.a.a	ENSGT00940000158215	ENSGT00950000182920.b.a.b.a.b	ENSGT00390000008250	ENSGT00390000007252.c #7	ENSGT00940000156243 #9	ENSGT00940000154737.d	ENSGT00440000034932 #11	ENSGT00390000005844.a.b #12	ENSGT00390000007924 #14	ENSGT00940000154706.d #16	ENSGT00390000005708 #17	ENSGT00950000182917.a.a.a.a ##18	ENSGT00940000156990 #21	ENSGT00530000063926.a #22	ENSGT00940000158006 #23	ENSGT00950000182916.a.b.a.b #24	ENSGT00940000155586.B #27	ENSGT00530000063790.b #29	ENSGT00940000155804 #30	ENSGT00940000153617.D #31	ENSGT00940000154930 #35	ENSGT00390000017970.h #37	ENSGT00390000017970.g #37	ENSGT00390000008296.b.a.a	ENSGT00390000011483	ENSGT01000000214430.c.b.b.a	ENSGT00950000182991.B	ENSGT00940000163078.b	ENSGT00940000163078.a
Goode s thornscrub tortoise	MODERN SPECIES	20	PLIN2 (ENSGEVG00005020553)	HAUS6 (ENSGEVG00005020541)	SAXO1 (ENSGEVG00005020536) #7	ENSGEVG00005020522 #9	ENSGEVG00005020514 #9	ENSGEVG00005020511	ENSGEVG00005020505	CNTLN (ENSGEVG00005020472) #11	BNC2 (ENSGEVG00005020446) #12	CCDC171 (ENSGEVG00005020428) #14	PSIP1 (ENSGEVG00005020410) #16	SNAPC3 (ENSGEVG00005020404) #17	TTC39B (ENSGEVG00005020399) ##18	ENSGEVG00005020392 #21	ENSGEVG00005020384 #21	CER1 (ENSGEVG00005020383) #22	ZDHHC21 (ENSGEVG00005020380) #23	NFIB (ENSGEVG00005020350) #24	MPDZ (ENSGEVG00005017577) #27	LURAP1L (ENSGEVG00005016378) #29	TYRP1 (ENSGEVG00005016317) #30	ENSGEVG00005016285	ENSGEVG00005016249	PTPRD (ENSGEVG00005014461) #31	KDM4C (ENSGEVG00005014259) #35	GLDC (ENSGEVG00005013317) #37	UHRF2 (ENSGEVG00005013188)	KIAA2026 (ENSGEVG00005013144)	ENSGEVG00005013096	ENSGEVG00005013057	MTAP (ENSGEVG00005013037)
Abingdon island giant tortoise	MODERN SPECIES	36														TTC39B (ENSCABG00000020447) ##18	FREM1 (ENSCABG00000020448) #21	CER1 (ENSCABG00000020449) #22	ZDHHC21 (ENSCABG00000020450) #23	NFIB (ENSCABG00000020452) #24
Chinese turtle	MODERN SPECIES	668										BNC2 (ENSPSIG00000018240) #12	CCDC171 (ENSPSIG00000018249) #14	PSIP1 (ENSPSIG00000018261) #16	SNAPC3 (ENSPSIG00000007910) #17	TTC39B (ENSPSIG00000008198) ##18	FREM1 (ENSPSIG00000009646) #21	CER1 (ENSPSIG00000011573) #22	ZDHHC21 (ENSPSIG00000011600) #23	NFIB (ENSPSIG00000011879) #24	ENSPSIG00000001138	MPDZ (ENSPSIG00000012362) #27	ENSPSIG00000001192	LURAP1L (ENSPSIG00000012369) #29	TYRP1 (ENSPSIG00000012375) #30	ENSPSIG00000012762	ENSPSIG00000001210	ENSPSIG00000013032 #31	ENSPSIG00000013046 #31	ENSPSIG00000001237	KDM4C (ENSPSIG00000014316) #35	ENSPSIG00000014718	GLDC (ENSPSIG00000014726) #37