Glires	ANCESTRAL SPECIES	1	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00910000148666	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00960000189557	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00950000183206.b.c.b
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00910000148666	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00960000189557	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.b	ENSGT00940000161031 #35
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Muroidea	ANCESTRAL SPECIES	29	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Murinae	ANCESTRAL SPECIES	3	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Mus	ANCESTRAL SPECIES	4	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00900000143378 #21	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00900000143378 #21	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Ryukyu mouse	MODERN SPECIES	18	Nlrx1 (MGP_CAROLIEiJ_G0032105) #7	Nherf4 (MGP_CAROLIEiJ_G0032104) #8	Ccdc153 (MGP_CAROLIEiJ_G0032103) #9	Cbl (MGP_CAROLIEiJ_G0032102) #10	Mcam (MGP_CAROLIEiJ_G0032101) #11	MGP_CAROLIEiJ_G0032100 #12	C1qtnf5 (MGP_CAROLIEiJ_G0032099) #13	Mfrp (MGP_CAROLIEiJ_G0032098) #14	Usp2 (MGP_CAROLIEiJ_G0032097) #15	MGP_CAROLIEiJ_G0032096 #16	Thy1 (MGP_CAROLIEiJ_G0032095) #17	MGP_CAROLIEiJ_G0032094 #18	Nectin1 (MGP_CAROLIEiJ_G0032093) #19	Trim29 (MGP_CAROLIEiJ_G0032092) #20	MGP_CAROLIEiJ_G0032091 #21	Oaf (MGP_CAROLIEiJ_G0032090) #22	Pou2f3 (MGP_CAROLIEiJ_G0032089) #23	Tlcd5 (MGP_CAROLIEiJ_G0032088) #24	Arhgef12 (MGP_CAROLIEiJ_G0032087) #25	Grik4 (MGP_CAROLIEiJ_G0032086) #26	Tbcel (MGP_CAROLIEiJ_G0032085) #27	Tecta (MGP_CAROLIEiJ_G0032084) #28	Sc5d (MGP_CAROLIEiJ_G0032083) #29	Sorl1 (MGP_CAROLIEiJ_G0032082) #30	Ubash3b (MGP_CAROLIEiJ_G0032081) #31	Crtam (MGP_CAROLIEiJ_G0032080) #32	Jhy (MGP_CAROLIEiJ_G0032079) #33	Bsx (MGP_CAROLIEiJ_G0032078) #34	Clmp (MGP_CAROLIEiJ_G0032077) #35	MGP_CAROLIEiJ_G0032076 #36	MGP_CAROLIEiJ_G0032075 #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00900000143378 #21	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Mouse	MODERN SPECIES	18	Hinfp (ENSMUSG00000032119)	Abcg4 (ENSMUSG00000032131)	Nlrx1 (ENSMUSG00000032109) #7	Nherf4 (ENSMUSG00000032105) #8	Ccdc153 (ENSMUSG00000070306) #9	Cbl (ENSMUSG00000034342) #10	Mcam (ENSMUSG00000032135) #11	C1qtnf5 (ENSMUSG00000079592) #13	Mfrp (ENSMUSG00000034739) #14	Rnf26 (ENSMUSG00000053128) #12	Usp2 (ENSMUSG00000032010) #15	Gm49380 (ENSMUSG00000111409) #12	Thy1 (ENSMUSG00000032011) #17	Nectin1 (ENSMUSG00000032012) #19	Trim29 (ENSMUSG00000032013) #20	Oaf (ENSMUSG00000032014) #22	Pou2f3 (ENSMUSG00000032015) #23	Tlcd5 (ENSMUSG00000048503) #24	Arhgef12 (ENSMUSG00000059495) #25	Grik4 (ENSMUSG00000032017) #26	Tbcel (ENSMUSG00000037287) #27	Tecta (ENSMUSG00000037705) #28	Sc5d (ENSMUSG00000032018) #29	Sorl1 (ENSMUSG00000049313) #30	Ubash3b (ENSMUSG00000032020) #31	Crtam (ENSMUSG00000032021) #32	Jhy (ENSMUSG00000032023) #33	Bsx (ENSMUSG00000054360) #34	Hspa8 (ENSMUSG00000015656)	Clmp (ENSMUSG00000032024) #35	Gramd1b (ENSMUSG00000040111)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00900000143378 #21	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT01090000260664.b #36
spretus	MODERN SPECIES	18	Hinfp (MGP_SPRETEiJ_G0033244)	Abcg4 (MGP_SPRETEiJ_G0033243)	Nlrx1 (MGP_SPRETEiJ_G0033242) #7	Nherf4 (MGP_SPRETEiJ_G0033241) #8	Ccdc153 (MGP_SPRETEiJ_G0033240) #9	Cbl (MGP_SPRETEiJ_G0033239) #10	Mcam (MGP_SPRETEiJ_G0033238) #11	C1qtnf5 (MGP_SPRETEiJ_G0033237) #13	Mfrp (MGP_SPRETEiJ_G0033236) #14	Usp2 (MGP_SPRETEiJ_G0033235) #15	Thy1 (MGP_SPRETEiJ_G0033234) #17	MGP_SPRETEiJ_G0033233 #18	Nectin1 (MGP_SPRETEiJ_G0033232) #19	Trim29 (MGP_SPRETEiJ_G0033231) #20	MGP_SPRETEiJ_G0033230 #21	Oaf (MGP_SPRETEiJ_G0033229) #22	Pou2f3 (MGP_SPRETEiJ_G0033228) #23	Tlcd5 (MGP_SPRETEiJ_G0033227) #24	Arhgef12 (MGP_SPRETEiJ_G0033226) #25	Grik4 (MGP_SPRETEiJ_G0033225) #26	Tbcel (MGP_SPRETEiJ_G0033224) #27	Tecta (MGP_SPRETEiJ_G0033223) #28	Sc5d (MGP_SPRETEiJ_G0033222) #29	Sorl1 (MGP_SPRETEiJ_G0033221) #30	Ubash3b (MGP_SPRETEiJ_G0033220) #31	Crtam (MGP_SPRETEiJ_G0033219) #32	MGP_SPRETEiJ_G0033218	Bsx (MGP_SPRETEiJ_G0033217) #34	MGP_SPRETEiJ_G0033216	Clmp (MGP_SPRETEiJ_G0033215) #35	MGP_SPRETEiJ_G0033214 #36
Steppe mouse	MODERN SPECIES	3372	Hinfp (ENSMSIG00000006782)	Abcg4 (ENSMSIG00000006744)	Nlrx1 (ENSMSIG00000006689) #7	Nherf4 (ENSMSIG00000006641) #8	ENSMSIG00000006533 #9	Cbl (ENSMSIG00000006132) #10	Mcam (ENSMSIG00000005960) #11	ENSMSIG00000005943	C1qtnf5 (ENSMSIG00000005880) #13	Mfrp (ENSMSIG00000005799) #14	Usp2 (ENSMSIG00000005680) #15	Thy1 (ENSMSIG00000005655) #17	ENSMSIG00000005646	Nectin1 (ENSMSIG00000005582) #19	Trim29 (ENSMSIG00000005545) #20	Oaf (ENSMSIG00000005521) #22	Pou2f3 (ENSMSIG00000005446) #23	Tlcd5 (ENSMSIG00000005422) #24	Arhgef12 (ENSMSIG00000005106) #25	ENSMSIG00000005080 #26
Shrew mouse	MODERN SPECIES	1	Nlrx1 (MGP_PahariEiJ_G0014974) #7	Nherf4 (MGP_PahariEiJ_G0014973) #8	Ccdc153 (MGP_PahariEiJ_G0014972) #9	Cbl (MGP_PahariEiJ_G0014971) #10	Mcam (MGP_PahariEiJ_G0014970) #11	MGP_PahariEiJ_G0014969 #12	C1qtnf5 (MGP_PahariEiJ_G0014968) #13	Mfrp (MGP_PahariEiJ_G0014967) #14	Usp2 (MGP_PahariEiJ_G0014966) #15	MGP_PahariEiJ_G0014965 #12	Thy1 (MGP_PahariEiJ_G0014964) #17	MGP_PahariEiJ_G0014963 #18	Nectin1 (MGP_PahariEiJ_G0014962) #19	Trim29 (MGP_PahariEiJ_G0014961) #20	MGP_PahariEiJ_G0014960 #21	Oaf (MGP_PahariEiJ_G0014959) #22	Pou2f3 (MGP_PahariEiJ_G0014958) #23	Tlcd5 (MGP_PahariEiJ_G0014957) #24	Arhgef12 (MGP_PahariEiJ_G0014956) #25	Grik4 (MGP_PahariEiJ_G0014955) #26	Tbcel (MGP_PahariEiJ_G0014954) #27	Tecta (MGP_PahariEiJ_G0014953) #28	Sc5d (MGP_PahariEiJ_G0014952) #29	Sorl1 (MGP_PahariEiJ_G0014951) #30	Ubash3b (MGP_PahariEiJ_G0014950) #31	Crtam (MGP_PahariEiJ_G0014949) #32	Jhy (MGP_PahariEiJ_G0014948) #33	Bsx (MGP_PahariEiJ_G0014947) #34	Hspa8 (MGP_PahariEiJ_G0014946)	Clmp (MGP_PahariEiJ_G0014945) #35	MGP_PahariEiJ_G0014944
Rat	MODERN SPECIES	18	Dpagt1 (ENSRNOG00000009799)	C2cd2l (ENSRNOG00000009719)	Hinfp (ENSRNOG00000009499)	Abcg4 (ENSRNOG00000008862)	Nlrx1 (ENSRNOG00000052386) #7	Nherf4 (ENSRNOG00000008526) #8	Ccdc153 (ENSRNOG00000039086) #9	Cbl (ENSRNOG00000008444) #10	Mcam (ENSRNOG00000007726) #11	C1qtnf5 (ENSRNOG00000007613) #13	Mfrp (ENSRNOG00000039107) #14	Usp2 (ENSRNOG00000006663) #15	Thy1 (ENSRNOG00000006604) #17	Nectin1 (ENSRNOG00000006403) #19	Trim29 (ENSRNOG00000021771) #20	Oaf (ENSRNOG00000009243) #22	Pou2f3 (ENSRNOG00000009118) #23	Tlcd5 (ENSRNOG00000021793) #24	Arhgef12 (ENSRNOG00000008924) #25	Grik4 (ENSRNOG00000030910) #26	Tbcel (ENSRNOG00000032364) #27	Tecta (ENSRNOG00000031126) #28	Sc5d (ENSRNOG00000065944) #29	Sorl1 (ENSRNOG00000064634) #30	LOC120094123 (ENSRNOG00000064399)	AABR07070043.1 (ENSRNOG00000050630)	Ubash3b (ENSRNOG00000008187) #31	Crtam (ENSRNOG00000008153) #32	Jhy (ENSRNOG00000008138) #33	Bsx (ENSRNOG00000024438) #34	Hspa8 (ENSRNOG00000034066)
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Chinese hamster chok1gshd	MODERN SPECIES	284	Hinfp (ENSCGRG00001010851)	Abcg4 (ENSCGRG00001017119)	Nlrx1 (ENSCGRG00001006742) #7	Nherf4 (ENSCGRG00001021077) #8	Ccdc153 (ENSCGRG00001023411) #9	Cbl (ENSCGRG00001019559) #10	Mcam (ENSCGRG00001014043) #11	ENSCGRG00001005426 #12	C1qtnf5 (ENSCGRG00001016723) #13	Mfrp (ENSCGRG00001017647) #14	Usp2 (ENSCGRG00001016286) #15	Thy1 (ENSCGRG00001001406) #17	ENSCGRG00001011094 #18	Nectin1 (ENSCGRG00001008640) #19	Trim29 (ENSCGRG00001014242) #20	Oaf (ENSCGRG00001018323) #22	Pou2f3 (ENSCGRG00001012087) #23	Tlcd5 (ENSCGRG00001014506) #24	Arhgef12 (ENSCGRG00001003759) #25	Grik4 (ENSCGRG00001023572) #26	Tbcel (ENSCGRG00001001381) #27	Tecta (ENSCGRG00001023887) #28	Sc5d (ENSCGRG00001019376) #29	Sorl1 (ENSCGRG00001006014) #30	Ubash3b (ENSCGRG00001023441) #31	Crtam (ENSCGRG00001024613) #32	Jhy (ENSCGRG00001019158) #33	Bsx (ENSCGRG00001010422) #34
Golden Hamster	MODERN SPECIES	635	H2ax (ENSMAUG00000009744)	Dpagt1 (ENSMAUG00000000991)	C2cd2l (ENSMAUG00000021418)	Hinfp (ENSMAUG00000003103)	Abcg4 (ENSMAUG00000009172)	Nherf4 (ENSMAUG00000016271) #8	Ccdc153 (ENSMAUG00000008442) #9	ENSMAUG00000022099 #10	Mcam (ENSMAUG00000018109) #11	C1qtnf5 (ENSMAUG00000002647) #13	Mfrp (ENSMAUG00000019232) #14	ENSMAUG00000021537 #15	Thy1 (ENSMAUG00000012348) #17	Nectin1 (ENSMAUG00000008955) #19	Trim29 (ENSMAUG00000016385) #20	Oaf (ENSMAUG00000010047) #22	ENSMAUG00000010627	Pou2f3 (ENSMAUG00000016359) #23	Tlcd5 (ENSMAUG00000018827) #24	Arhgef12 (ENSMAUG00000013007) #25	Grik4 (ENSMAUG00000012098) #26	Tbcel (ENSMAUG00000021001) #27	Tecta (ENSMAUG00000021166) #28	Sc5d (ENSMAUG00000014340) #29	Sorl1 (ENSMAUG00000014163) #30	Ubash3b (ENSMAUG00000003703) #31	Crtam (ENSMAUG00000010485) #32	Jhy (ENSMAUG00000013429) #33	Bsx (ENSMAUG00000019955) #34	Hspa8 (ENSMAUG00000012651)	Clmp (ENSMAUG00000021491) #35
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00530000063764.b	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.a.a	ENSGT00940000161031 #35	ENSGT00940000156649
Prairie vole	MODERN SPECIES	13	Hinfp (ENSMOCG00000021370)	ENSMOCG00000016515	ENSMOCG00000021558	Nlrx1 (ENSMOCG00000001642) #7	Nherf4 (ENSMOCG00000018814) #8	Ccdc153 (ENSMOCG00000016546) #9	Cbl (ENSMOCG00000008619) #10	Mcam (ENSMOCG00000020037) #11	C1qtnf5 (ENSMOCG00000016995) #13	Mfrp (ENSMOCG00000021315) #14	Usp2 (ENSMOCG00000011563) #15	Thy1 (ENSMOCG00000000954) #17	ENSMOCG00000012324 #18	Nectin1 (ENSMOCG00000005304) #19	Trim29 (ENSMOCG00000005539) #20	Oaf (ENSMOCG00000018469) #22	Pou2f3 (ENSMOCG00000015293) #23	Tlcd5 (ENSMOCG00000015604) #24	Arhgef12 (ENSMOCG00000022529) #25	Grik4 (ENSMOCG00000022422) #26	Tbcel (ENSMOCG00000012495) #27	Tecta (ENSMOCG00000007372) #28	Sc5d (ENSMOCG00000012716) #29	Sorl1 (ENSMOCG00000009449) #30	Ubash3b (ENSMOCG00000008480) #31	Crtam (ENSMOCG00000012290) #32	Jhy (ENSMOCG00000018657) #33	Bsx (ENSMOCG00000017866) #34	Hspa8 (ENSMOCG00000012873)	Clmp (ENSMOCG00000008613) #35	ENSMOCG00000006783
Northern American deer mouse	MODERN SPECIES	20	Dpagt1 (ENSPEMG00000008668)	C2cd2l (ENSPEMG00000007030)	Hinfp (ENSPEMG00000024103)	Abcg4 (ENSPEMG00000013354)	Nlrx1 (ENSPEMG00000012665) #7	Nherf4 (ENSPEMG00000017700) #8	Ccdc153 (ENSPEMG00000007870) #9	Cbl (ENSPEMG00000023847) #10	Mcam (ENSPEMG00000003786) #11	C1qtnf5 (ENSPEMG00000010725) #13	Mfrp (ENSPEMG00000017956) #14	Usp2 (ENSPEMG00000024068) #15	Thy1 (ENSPEMG00000025576) #17	Nectin1 (ENSPEMG00000000009) #19	Trim29 (ENSPEMG00000020223) #20	Oaf (ENSPEMG00000019857) #22	Pou2f3 (ENSPEMG00000017517) #23	Tlcd5 (ENSPEMG00000028823) #24	Arhgef12 (ENSPEMG00000004297) #25	Grik4 (ENSPEMG00000019743) #26	Tbcel (ENSPEMG00000019830) #27	Tecta (ENSPEMG00000019833) #28	Sc5d (ENSPEMG00000019479) #29	Sorl1 (ENSPEMG00000020008) #30	ENSPEMG00000030566	ENSPEMG00000012971	Ubash3b (ENSPEMG00000020009) #31	Crtam (ENSPEMG00000020104) #32	Jhy (ENSPEMG00000019964) #33	Bsx (ENSPEMG00000019624) #34	Hspa8 (ENSPEMG00000019570)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1889	C2cd2l (ENSNGAG00000022260)	Hinfp (ENSNGAG00000001024)	Abcg4 (ENSNGAG00000023878)	Nlrx1 (ENSNGAG00000016377) #7	Nherf4 (ENSNGAG00000023370) #8	Ccdc153 (ENSNGAG00000020146) #9	Cbl (ENSNGAG00000021221) #10	Mcam (ENSNGAG00000022720) #11	C1qtnf5 (ENSNGAG00000023822) #13	Mfrp (ENSNGAG00000024285) #14	ENSNGAG00000022179	Thy1 (ENSNGAG00000023265) #17	ENSNGAG00000023549 #18	Nectin1 (ENSNGAG00000018208) #19	Trim29 (ENSNGAG00000020925) #20	Oaf (ENSNGAG00000011846) #22	Pou2f3 (ENSNGAG00000012581) #23	Tlcd5 (ENSNGAG00000016671) #24	Arhgef12 (ENSNGAG00000012115) #25	Grik4 (ENSNGAG00000023666) #26	Tbcel (ENSNGAG00000017476) #27	Tecta (ENSNGAG00000023948) #28	ENSNGAG00000022481 #29	Sorl1 (ENSNGAG00000017411) #30	Ubash3b (ENSNGAG00000014740) #31	Crtam (ENSNGAG00000022401) #32	Jhy (ENSNGAG00000001947) #33	Bsx (ENSNGAG00000024248) #34	Hspa8 (ENSNGAG00000011644)	Clmp (ENSNGAG00000019063) #35	ENSNGAG00000023270
Lesser Egyptian jerboa	MODERN SPECIES	142	ENSJJAG00000018587	Abcg4 (ENSJJAG00000018308)	Nlrx1 (ENSJJAG00000017225) #7	Nherf4 (ENSJJAG00000016131) #8	Ccdc153 (ENSJJAG00000015748) #9	Cbl (ENSJJAG00000015255) #10	Mcam (ENSJJAG00000014314) #11	C1qtnf5 (ENSJJAG00000014085) #13	Mfrp (ENSJJAG00000013394) #14	ENSJJAG00000012486	Thy1 (ENSJJAG00000012028) #17	ENSJJAG00000014022	ENSJJAG00000016113 #18	Nectin1 (ENSJJAG00000015953) #19	Trim29 (ENSJJAG00000015693) #20	Oaf (ENSJJAG00000015119) #22	Pou2f3 (ENSJJAG00000014254) #23	Tlcd5 (ENSJJAG00000013409) #24	Arhgef12 (ENSJJAG00000008231) #25	Grik4 (ENSJJAG00000022344) #26	Tbcel (ENSJJAG00000020854) #27	Tecta (ENSJJAG00000018896) #28	Sc5d (ENSJJAG00000017694) #29	Sorl1 (ENSJJAG00000017298) #30	Ubash3b (ENSJJAG00000016033) #31	Crtam (ENSJJAG00000014838) #32	Jhy (ENSJJAG00000013871) #33	Bsx (ENSJJAG00000013198) #34	Hspa8 (ENSJJAG00000012917)	Clmp (ENSJJAG00000012798) #35	Pcnt (ENSJJAG00000011857)
Kangaroo rat	MODERN SPECIES	329	Hinfp (ENSDORG00000001981)	Abcg4 (ENSDORG00000001982)	Nlrx1 (ENSDORG00000001985) #7	Nherf4 (ENSDORG00000001987) #8	Ccdc153 (ENSDORG00000001988) #9	ENSDORG00000026565 #10	Mcam (ENSDORG00000014625) #11	ENSDORG00000030084 #12	C1qtnf5 (ENSDORG00000014627) #13	Mfrp (ENSDORG00000014629) #14	ENSDORG00000024719	Thy1 (ENSDORG00000028907) #17	ENSDORG00000023239 #18	Nectin1 (ENSDORG00000000398) #19	Trim29 (ENSDORG00000007322) #20	ENSDORG00000028006 #22	Pou2f3 (ENSDORG00000003563) #23	Tlcd5 (ENSDORG00000025068) #24	Arhgef12 (ENSDORG00000007308) #25	Grik4 (ENSDORG00000009556) #26	Tbcel (ENSDORG00000025652) #27	Tecta (ENSDORG00000008805) #28	Sc5d (ENSDORG00000011258) #29	Sorl1 (ENSDORG00000002124) #30	Ubash3b (ENSDORG00000011099) #31	Crtam (ENSDORG00000001816) #32	Jhy (ENSDORG00000014465) #33	Bsx (ENSDORG00000027972) #34	ENSDORG00000015467	Clmp (ENSDORG00000026028) #35	Gramd1b (ENSDORG00000003924)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00910000148666	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00960000189557	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.b	ENSGT00940000161031 #35
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.b.f	ENSGT00940000161031 #35	ENSGT00940000156649
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.b.f	ENSGT00940000161031 #35	ENSGT00940000156649
Guinea pig	MODERN SPECIES	19	HINFP (ENSCPOG00000006488)	ABCG4 (ENSCPOG00000006495)	NLRX1 (ENSCPOG00000006501) #7	NHERF4 (ENSCPOG00000022891) #8	CCDC153 (ENSCPOG00000014080) #9	CBL (ENSCPOG00000001063) #10	MCAM (ENSCPOG00000026038) #11	RNF26 (ENSCPOG00000004509) #12	C1QTNF5 (ENSCPOG00000032489) #13	MFRP (ENSCPOG00000004515) #14	USP2 (ENSCPOG00000004520) #15	THY1 (ENSCPOG00000012275) #17	ENSCPOG00000022924 #18	NECTIN1 (ENSCPOG00000001254) #19	TRIM29 (ENSCPOG00000005979) #20	OAF (ENSCPOG00000037745) #22	POU2F3 (ENSCPOG00000010476) #23	TLCD5 (ENSCPOG00000037960) #24	ARHGEF12 (ENSCPOG00000010479) #25	GRIK4 (ENSCPOG00000002918) #26	TBCEL (ENSCPOG00000009932) #27	TECTA (ENSCPOG00000012043) #28	SC5D (ENSCPOG00000032720) #29	SORL1 (ENSCPOG00000015350) #30	UBASH3B (ENSCPOG00000002154) #31	CRTAM (ENSCPOG00000002159) #32	JHY (ENSCPOG00000002163) #33	BSX (ENSCPOG00000002164) #34	ENSCPOG00000004169	CLMP (ENSCPOG00000004171) #35	GRAMD1B (ENSCPOG00000014646)
Hystricomorpha_b	ANCESTRAL SPECIES	23	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00420000030019 #18	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.b.f	ENSGT00940000161031 #35	ENSGT00940000156649
Long-tailed chinchilla	MODERN SPECIES	119	HINFP (ENSCLAG00000015648)	ABCG4 (ENSCLAG00000012102)	NLRX1 (ENSCLAG00000013967) #7	NHERF4 (ENSCLAG00000013388) #8	CCDC153 (ENSCLAG00000014523) #9	CBL (ENSCLAG00000015904) #10	MCAM (ENSCLAG00000016437) #11	C1QTNF5 (ENSCLAG00000013955) #13	RNF26 (ENSCLAG00000017073) #12	MFRP (ENSCLAG00000015767) #14	USP2 (ENSCLAG00000013003) #15	THY1 (ENSCLAG00000013561) #17	ENSCLAG00000012333 #18	NECTIN1 (ENSCLAG00000012784) #19	TRIM29 (ENSCLAG00000015449) #20	OAF (ENSCLAG00000014022) #22	POU2F3 (ENSCLAG00000014931) #23	TLCD5 (ENSCLAG00000016010) #24	ARHGEF12 (ENSCLAG00000013240) #25	GRIK4 (ENSCLAG00000013746) #26	TBCEL (ENSCLAG00000012858) #27	TECTA (ENSCLAG00000015701) #28	ENSCLAG00000014057	SC5D (ENSCLAG00000014644) #29	SORL1 (ENSCLAG00000015040) #30	UBASH3B (ENSCLAG00000015024) #31	CRTAM (ENSCLAG00000013885) #32	JHY (ENSCLAG00000015081) #33	BSX (ENSCLAG00000013667) #34	ENSCLAG00000014646	CLMP (ENSCLAG00000014572) #35
Degu	MODERN SPECIES	121	ABCG4 (ENSODEG00000008192)	NLRX1 (ENSODEG00000007636) #7	NHERF4 (ENSODEG00000007000) #8	CCDC153 (ENSODEG00000008452) #9	ENSODEG00000007893	ENSODEG00000007290 #10	MCAM (ENSODEG00000008067) #11	RNF26 (ENSODEG00000007188) #12	C1QTNF5 (ENSODEG00000006895) #13	MFRP (ENSODEG00000007223) #14	ENSODEG00000008794	THY1 (ENSODEG00000008554) #17	ENSODEG00000006811 #18	NECTIN1 (ENSODEG00000006611) #19	TRIM29 (ENSODEG00000008046) #20	OAF (ENSODEG00000007327) #22	POU2F3 (ENSODEG00000006896) #23	ENSODEG00000008437	ARHGEF12 (ENSODEG00000006885) #25	GRIK4 (ENSODEG00000006186) #26	TBCEL (ENSODEG00000005962) #27	TECTA (ENSODEG00000008800) #28	SC5D (ENSODEG00000010056) #29	SORL1 (ENSODEG00000006848) #30	UBASH3B (ENSODEG00000006578) #31	CRTAM (ENSODEG00000006736) #32	JHY (ENSODEG00000005965) #33	BSX (ENSODEG00000006223) #34	ENSODEG00000006143	CLMP (ENSODEG00000007944) #35	GRAMD1B (ENSODEG00000006791)
Naked mole-rat female	MODERN SPECIES	24	C2CD2L (ENSHGLG00000008561)	HINFP (ENSHGLG00000008906)	ABCG4 (ENSHGLG00000017291)	NLRX1 (ENSHGLG00000016390) #7	NHERF4 (ENSHGLG00000016411) #8	CCDC153 (ENSHGLG00000016435) #9	CBL (ENSHGLG00000016461) #10	MCAM (ENSHGLG00000016479) #11	C1QTNF5 (ENSHGLG00000017303) #13	RNF26 (ENSHGLG00000041550) #12	MFRP (ENSHGLG00000016623) #14	USP2 (ENSHGLG00000014829) #15	THY1 (ENSHGLG00000014880) #17	PVRL1 (ENSHGLG00000043579) #19	TRIM29 (ENSHGLG00000014267) #20	OAF (ENSHGLG00000033618) #22	POU2F3 (ENSHGLG00000014398) #23	ENSHGLG00000013373 #24	ENSHGLG00000044765	ENSHGLG00000032129	ENSHGLG00000041577	ENSHGLG00000037656	ENSHGLG00000039637	ENSHGLG00000033717	ENSHGLG00000037954	ENSHGLG00000019912	ENSHGLG00000048171	ENSHGLG00000001602	ENSHGLG00000001364	ENSHGLG00000001180	ENSHGLG00000049536
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00910000148666	ENSGT00940000155838 #11	ENSGT00390000016584 #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00960000189557	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.b	ENSGT00940000161031 #35
Marmotini	ANCESTRAL SPECIES	20	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00910000148666	ENSGT00940000155838 #11	ENSGT00390000016584.o #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00960000189557	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.b	ENSGT00940000161031 #35
Marmotini_b	ANCESTRAL SPECIES	43	ENSGT00870000136508.c.a	ENSGT00940000157853	ENSGT00940000159493 #7	ENSGT00950000182849.A.f.a #8	ENSGT00390000016289 #9	ENSGT00940000155772.b #10	ENSGT00910000148666	ENSGT00940000155838 #11	ENSGT00390000016584.o #12	ENSGT00940000161353 #13	ENSGT00940000154525.b.b #14	ENSGT00940000161289 #15	ENSGT00390000012352 #17	ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00950000183206.b.c.b	ENSGT00940000161031 #35	ENSGT00940000156649
Arctic ground squirrel	MODERN SPECIES	291	HINFP (ENSUPAG00010018430)	ABCG4 (ENSUPAG00010018446)	NLRX1 (ENSUPAG00010018469) #7	NHERF4 (ENSUPAG00010018496) #8	CCDC153 (ENSUPAG00010018519) #9	CBL (ENSUPAG00010018560) #10	ENSUPAG00010018655	MCAM (ENSUPAG00010018664) #11	ENSUPAG00010018736 #12	C1QTNF5 (ENSUPAG00010018740) #13	MFRP (ENSUPAG00010018750) #14	USP2 (ENSUPAG00010018785) #15	THY1 (ENSUPAG00010018968) #17	NECTIN1 (ENSUPAG00010018985) #19	TRIM29 (ENSUPAG00010018992) #20	OAF (ENSUPAG00010019004) #22	POU2F3 (ENSUPAG00010019015) #23	TLCD5 (ENSUPAG00010019046) #24	ARHGEF12 (ENSUPAG00010019053) #25	GRIK4 (ENSUPAG00010019127) #26	TBCEL (ENSUPAG00010019167) #27	TECTA (ENSUPAG00010019193) #28	SC5D (ENSUPAG00010019233) #29	SORL1 (ENSUPAG00010019264) #30
Squirrel	MODERN SPECIES	142	DPAGT1 (ENSSTOG00000014431)	ENSSTOG00000014438	HINFP (ENSSTOG00000014457)	ABCG4 (ENSSTOG00000014465)	NLRX1 (ENSSTOG00000014477) #7	CCDC153 (ENSSTOG00000014500) #9	CBL (ENSSTOG00000005298) #10	MCAM (ENSSTOG00000019932) #11	ENSSTOG00000026036 #12	C1QTNF5 (ENSSTOG00000022915) #13	MFRP (ENSSTOG00000005406) #14	USP2 (ENSSTOG00000005428) #15	THY1 (ENSSTOG00000005455) #17	NECTIN1 (ENSSTOG00000029172) #19	TRIM29 (ENSSTOG00000001978) #20	OAF (ENSSTOG00000026759) #22	POU2F3 (ENSSTOG00000015839) #23	TLCD5 (ENSSTOG00000022791) #24	ARHGEF12 (ENSSTOG00000015856) #25	GRIK4 (ENSSTOG00000015883) #26	TBCEL (ENSSTOG00000015896) #27	TECTA (ENSSTOG00000009622) #28	SC5D (ENSSTOG00000008946) #29	SORL1 (ENSSTOG00000003552) #30	ENSSTOG00000020141	UBASH3B (ENSSTOG00000006728) #31	JHY (ENSSTOG00000022876) #33	BSX (ENSSTOG00000021809) #34	ENSSTOG00000003756	CLMP (ENSSTOG00000003773) #35	ENSSTOG00000027106
Alpin marmot	MODERN SPECIES	25	C2CD2L (ENSMMMG00000022455)	HINFP (ENSMMMG00000022437)	ABCG4 (ENSMMMG00000022429)	NLRX1 (ENSMMMG00000022409) #7	NHERF4 (ENSMMMG00000022402) #8	CCDC153 (ENSMMMG00000022391) #9	CBL (ENSMMMG00000022366) #10	MCAM (ENSMMMG00000022337) #11	ENSMMMG00000022331 #12	C1QTNF5 (ENSMMMG00000022321) #13	MFRP (ENSMMMG00000022302) #14	USP2 (ENSMMMG00000022252) #15	THY1 (ENSMMMG00000022247) #17	NECTIN1 (ENSMMMG00000022229) #19	TRIM29 (ENSMMMG00000022209) #20	OAF (ENSMMMG00000022206) #22	POU2F3 (ENSMMMG00000022201) #23	TLCD5 (ENSMMMG00000022200) #24	ENSMMMG00000022179 #25	GRIK4 (ENSMMMG00000022153) #26	TBCEL (ENSMMMG00000022111) #27	TECTA (ENSMMMG00000022096) #28	SC5D (ENSMMMG00000022092) #29	SORL1 (ENSMMMG00000022068) #30	ENSMMMG00000022058	UBASH3B (ENSMMMG00000022045) #31	CRTAM (ENSMMMG00000022027) #32	JHY (ENSMMMG00000022018) #33	BSX (ENSMMMG00000022013) #34	ENSMMMG00000022001	CLMP (ENSMMMG00000021995) #35
Eurasian red squirrel	MODERN SPECIES	2	NHERF4 (ENSSVLG00005015805) #8	CCDC153 (ENSSVLG00005016066) #9	CBL (ENSSVLG00005016142) #10	ENSSVLG00005016208	ENSSVLG00005016245	ENSSVLG00005016282	MCAM (ENSSVLG00005016303) #11	RNF26 (ENSSVLG00005016333) #12	C1QTNF5 (ENSSVLG00005016350) #13	MFRP (ENSSVLG00005016384) #14	USP2 (ENSSVLG00005016536) #15	THY1 (ENSSVLG00005016800) #17	ENSSVLG00005016845	NECTIN1 (ENSSVLG00005016885) #19	TRIM29 (ENSSVLG00005016988) #20	OAF (ENSSVLG00005017300) #22	POU2F3 (ENSSVLG00005017350) #23	TLCD5 (ENSSVLG00005017509) #24	ARHGEF12 (ENSSVLG00005017668) #25	GRIK4 (ENSSVLG00005017812) #26	TBCEL (ENSSVLG00005018006) #27	TECTA (ENSSVLG00005018068) #28	SC5D (ENSSVLG00005018507) #29	SORL1 (ENSSVLG00005018596) #30	UBASH3B (ENSSVLG00005019548) #31	CRTAM (ENSSVLG00005019670) #32	JHY (ENSSVLG00005019812) #33	BSX (ENSSVLG00005019921) #34	ENSSVLG00005019956	ENSSVLG00005020047	CLMP (ENSSVLG00005020407) #35
Lagomorpha	ANCESTRAL SPECIES	136														ENSGT00940000156933 #19	ENSGT00940000161416 #20	ENSGT00390000012008 #22	ENSGT00940000157627 #23	ENSGT00390000008162 #24	ENSGT00940000157662 #25	ENSGT00940000159111 #26	ENSGT00530000063405.b #27	ENSGT00950000183155.a.a.a.b #28	ENSGT00550000075101 #29	ENSGT01030000234563.a.b #30	ENSGT00940000156097 #31	ENSGT00940000159804 #32	ENSGT00390000002823 #33	ENSGT00940000161473 #34	ENSGT00940000161031 #35	ENSGT00950000183206.b.c.b	ENSGT00940000156649
Rabbit	MODERN SPECIES		SIK3 (ENSOCUG00000011238)	PAFAH1B2 (ENSOCUG00000039266)	SIDT2 (ENSOCUG00000011955)	ENSOCUG00000011970	PCSK7 (ENSOCUG00000011974)	RNF214 (ENSOCUG00000011993)	BACE1 (ENSOCUG00000022776)	CEP164 (ENSOCUG00000010318)	DSCAML1 (ENSOCUG00000010335)	FXYD2 (ENSOCUG00000010359)	FXYD6 (ENSOCUG00000005593)	ENSOCUG00000030071	NECTIN1 (ENSOCUG00000010458) #19	ENSOCUG00000028128	TRIM29 (ENSOCUG00000021297) #20	OAF (ENSOCUG00000025219) #22	POU2F3 (ENSOCUG00000002831) #23	TLCD5 (ENSOCUG00000005192) #24	ARHGEF12 (ENSOCUG00000005196) #25	GRIK4 (ENSOCUG00000002692) #26	TBCEL (ENSOCUG00000002876) #27	TECTA (ENSOCUG00000001263) #28	ENSOCUG00000031744	SC5D (ENSOCUG00000011339) #29	SORL1 (ENSOCUG00000011346) #30	UBASH3B (ENSOCUG00000013072) #31	CRTAM (ENSOCUG00000013086) #32	JHY (ENSOCUG00000015523) #33	BSX (ENSOCUG00000002684) #34	ENSOCUG00000037082	ENSOCUG00000015533
Pika	MODERN SPECIES	3993																OAF (ENSOPRG00000005370) #22	POU2F3 (ENSOPRG00000005379) #23	TLCD5 (ENSOPRG00000005406) #24	ARHGEF12 (ENSOPRG00000005412) #25	GRIK4 (ENSOPRG00000005483) #26	TBCEL (ENSOPRG00000005511) #27	TECTA (ENSOPRG00000005527) #28