Murinae ANCESTRAL SPECIES 6 ENSGT00390000018512 #8 ENSGT00940000161333 #9 ENSGT00390000012872 #12 ENSGT00940000162516 #10 ENSGT00940000153123.A.f #11 ENSGT00940000158348 ENSGT00940000157948.D #13 ENSGT00940000157519 #14 ENSGT00940000154076.C.c #15 ENSGT00390000002373 #16 ENSGT00940000159620.a #17 ENSGT00390000014681 #18 ENSGT00390000011615.A #19 ENSGT00510000047537 #20 ENSGT00390000011093 #21 ENSGT00390000011309 #22 ENSGT00950000182935.B.a #23 ENSGT01050000244808.F #24 ENSGT01050000244894.a.a.a.b #25 ENSGT01050000244894.b.b #26 ENSGT00940000157598 #27 ENSGT00940000157195 #28 ENSGT00940000155386.f #29 ENSGT00940000153470.a.b.b #30 ENSGT00390000012918.c #31 ENSGT00940000154883.h #32 ENSGT00510000048008 #33 ENSGT00940000156867 #34 ENSGT00940000163380 ENSGT00940000159930 #36 ENSGT00860000135966 Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 1 Rbfox3 (ENSRNOG00000003386) #7 Engase (ENSRNOG00000027498) #8 C1qtnf1 (ENSRNOG00000003259) #9 Lgals3bp (ENSRNOG00000003217) #10 Timp2 (ENSRNOG00000033143) #11 Cant1 (ENSRNOG00000003239) #12 Usp36 (ENSRNOG00000028255) #13 Cyth1 (ENSRNOG00000043381) #14 Dnah17 (ENSRNOG00000003028) #15 Pgs1 (ENSRNOG00000002949) #16 Socs3 (ENSRNOG00000063373) #17 Tha1 (ENSRNOG00000045615) #18 Tmem235 (ENSRNOG00000048231) #19 Birc5 (ENSRNOG00000050819) #20 Afmid (ENSRNOG00000050205) #21 Tk1 (ENSRNOG00000047314) #22 Syngr2 (ENSRNOG00000050547) #23 LOC688282 (ENSRNOG00000045889) #24 Tmc8 (ENSRNOG00000046086) #25 Tmc6 (ENSRNOG00000053469) #26 Tnrc6c (ENSRNOG00000022395) #27 Septin9 (ENSRNOG00000002807) #28 Sec14l1 (ENSRNOG00000002722) #29 Mgat5b (ENSRNOG00000024954) #30 Mfsd11 (ENSRNOG00000000247) #31 Srsf2 (ENSRNOG00000000248) #32 Mettl23 (ENSRNOG00000000249) #33 Jmjd6 (ENSRNOG00000000250) #34 Mxra7 (ENSRNOG00000042915) #35 St6galnac1 (ENSRNOG00000000251) #36 St6galnac2 (ENSRNOG00000012083) #37 Rat MODERN SPECIES 13 ENSRNOG00000063280 ENSRNOG00000062726 Sqor (ENSRNOG00000000172) Slc30a4 (ENSRNOG00000000170) Spata5l1 (ENSRNOG00000000169) Gatm (ENSRNOG00000000168) Tra2b-ps3 (ENSRNOG00000051627) LOC120101644 (ENSRNOG00000068036) LOC120101643 (ENSRNOG00000066870) Slc28a2 (ENSRNOG00000028668) Shf (ENSRNOG00000028685) Duox1 (ENSRNOG00000033348) Duoxa1 (ENSRNOG00000018005) Duoxa2 (ENSRNOG00000017805) Duox2 (ENSRNOG00000017395) AC112350.1 (ENSRNOG00000047508) ##22 Sord (ENSRNOG00000017291) Terb2 (ENSRNOG00000037178) Trim69 (ENSRNOG00000017157) B2m (ENSRNOG00000017123) Patl2 (ENSRNOG00000017061) Spg11 (ENSRNOG00000021954) Eif3j (ENSRNOG00000016459) Ctdspl2 (ENSRNOG00000022141) Golm2 (ENSRNOG00000016357) Frmd5 (ENSRNOG00000016189) Wdr76 (ENSRNOG00000022491) Mfap1a (ENSRNOG00000065756) Hypk (ENSRNOG00000065122) Serinc4 (ENSRNOG00000015499) Serf2 (ENSRNOG00000064233) Rat MODERN SPECIES 14 Garin1b (ENSRNOG00000006132) Garin1a (ENSRNOG00000039383) Impdh1 (ENSRNOG00000020032) Prrt4 (ENSRNOG00000039388) Rbm28 (ENSRNOG00000005468) Lep (ENSRNOG00000045797) Lrrc4 (ENSRNOG00000008098) Snd1 (ENSRNOG00000031173) Pax4 (ENSRNOG00000008020) Fscn3 (ENSRNOG00000007942) Arf5 (ENSRNOG00000007806) Gcc1 (ENSRNOG00000007792) Zfp800 (ENSRNOG00000007662) ENSRNOG00000064958 Grm8 (ENSRNOG00000021468) ENSRNOG00000063353 ##22 Pot1 (ENSRNOG00000019986) Gpr37 (ENSRNOG00000002524) Tmem229a (ENSRNOG00000069945) Hyal5 (ENSRNOG00000039466) Spam1 (ENSRNOG00000007231) Hyal4 (ENSRNOG00000007212) Hyal6 (ENSRNOG00000021695) ENSRNOG00000067771 Wasl (ENSRNOG00000006975) Lmod2 (ENSRNOG00000045831) Asb15 (ENSRNOG00000006365) Ndufa5 (ENSRNOG00000071062) Iqub (ENSRNOG00000021729) Slc13a1 (ENSRNOG00000008121) Tas2r118 (ENSRNOG00000021799) Mus ANCESTRAL SPECIES 2 ENSGT00390000018512 #8 ENSGT00940000161333 #9 ENSGT00390000012872 #12 ENSGT00940000162516 #10 ENSGT00940000153123.A.f #11 ENSGT00940000158348 ENSGT00940000157948.D #13 ENSGT00940000157519 #14 ENSGT00940000154076.C.c #15 ENSGT00390000002373 #16 ENSGT00940000159620.a #17 ENSGT00390000014681 #18 ENSGT00390000011615.A #19 ENSGT00510000047537 #20 ENSGT00390000011093 #21 ENSGT00390000011309 #22 ENSGT00950000182935.B.a #23 ENSGT01050000244808.F #24 ENSGT01050000244894.a.a.a.b #25 ENSGT01050000244894.b.b #26 ENSGT00940000157598 #27 ENSGT00860000135587 ENSGT00940000157195 #28 ENSGT00940000155386.f #29 ENSGT00940000153470.a.b.b #30 ENSGT00390000012918.c #31 ENSGT00940000154883.h #32 ENSGT00940000170233 ENSGT00510000048008 #33 ENSGT00940000156867 #34 ENSGT00940000163380 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000018512 #8 ENSGT00940000161333 #9 ENSGT00390000012872 #12 ENSGT00940000162516 #10 ENSGT00940000153123.A.f #11 ENSGT00940000158348 ENSGT00940000157948.D #13 ENSGT00940000157519 #14 ENSGT00940000154076.C.c #15 ENSGT00390000002373 #16 ENSGT00940000159620.a #17 ENSGT00390000014681 #18 ENSGT00390000011615.A #19 ENSGT00510000047537 #20 ENSGT00390000011093 #21 ENSGT00390000011309 #22 ENSGT00950000182935.B.a #23 ENSGT00860000135913 ENSGT01050000244808.F #24 ENSGT01050000244894.a.a.a.b #25 ENSGT01050000244894.b.b #26 ENSGT00940000157598 #27 ENSGT00860000135587 ENSGT00940000157195 #28 ENSGT00940000155386.f #29 ENSGT00940000153470.a.b.b #30 ENSGT00390000012918.c #31 ENSGT00940000154883.h #32 ENSGT00940000170233 ENSGT00510000048008 #33 ENSGT00940000156867 #34 Mus_B ANCESTRAL SPECIES 2 ENSGT00390000018512 #8 ENSGT00940000161333 #9 ENSGT00390000012872 #12 ENSGT00940000162516 #10 ENSGT00940000153123.A.f #11 ENSGT00940000158348 ENSGT00940000157948.D #13 ENSGT00940000157519 #14 ENSGT00940000154076.C.c #15 ENSGT00390000002373 #16 ENSGT00940000159620.a #17 ENSGT00390000014681 #18 ENSGT00390000011615.A #19 ENSGT00510000047537 #20 ENSGT00390000011093 #21 ENSGT00390000011309 #22 ENSGT00950000182935.B.a #23 ENSGT00860000135913 ENSGT01050000244808.F #24 ENSGT01050000244894.a.a.a.b #25 ENSGT01050000244894.b.b #26 ENSGT00940000157598 #27 ENSGT00860000135587 ENSGT00940000157195 #28 ENSGT00940000155386.f #29 ENSGT00940000153470.a.b.b #30 ENSGT00390000012918.c #31 ENSGT00940000154883.h #32 ENSGT00510000048008 #33 ENSGT00940000156867 #34 ENSGT00940000163380 Mus_C ANCESTRAL SPECIES 21 ENSGT00390000018512 #8 ENSGT00940000161333 #9 ENSGT00390000012872 #12 ENSGT00940000162516 #10 ENSGT00940000153123.A.f #11 ENSGT00940000158348 ENSGT00940000157948.D #13 ENSGT00940000157519 #14 ENSGT00940000154076.C.c #15 ENSGT00390000002373 #16 ENSGT00940000159620.a #17 ENSGT00390000014681 #18 ENSGT00390000011615.A #19 ENSGT00510000047537 #20 ENSGT00390000011093 #21 ENSGT00390000011309 #22 ENSGT00950000182935.B.a #23 ENSGT00860000135913 ENSGT01050000244808.F #24 ENSGT01050000244894.a.a.a.b #25 ENSGT01050000244894.b.b #26 ENSGT00940000157598 #27 ENSGT00860000135587 ENSGT00940000157195 #28 ENSGT00940000155386.f #29 ENSGT00940000153470.a.b.b #30 ENSGT00390000012918.c #31 ENSGT00940000154883.h #32 ENSGT00510000048008 #33 ENSGT00940000156867 #34 ENSGT00940000163380 Steppe mouse MODERN SPECIES 1422 ENSMSIG00000013290 #21 Tk1 (ENSMSIG00000013357) #22 Syngr2 (ENSMSIG00000013373) #23 spretus MODERN SPECIES 2 Engase (MGP_SPRETEiJ_G0018330) #8 C1qtnf1 (MGP_SPRETEiJ_G0018329) #9 Cant1 (MGP_SPRETEiJ_G0018328) #12 Lgals3bp (MGP_SPRETEiJ_G0018327) #10 Cep295nl (MGP_SPRETEiJ_G0018326) #11 Timp2 (MGP_SPRETEiJ_G0018325) Usp36 (MGP_SPRETEiJ_G0018324) #13 Cyth1 (MGP_SPRETEiJ_G0018323) #14 Dnah17 (MGP_SPRETEiJ_G0018322) #15 Pgs1 (MGP_SPRETEiJ_G0018321) #16 Socs3 (MGP_SPRETEiJ_G0018320) #17 Tha1 (MGP_SPRETEiJ_G0018319) #18 Tmem235 (MGP_SPRETEiJ_G0018318) #19 Birc5 (MGP_SPRETEiJ_G0018317) #20 Afmid (MGP_SPRETEiJ_G0018316) #21 Tk1 (MGP_SPRETEiJ_G0018315) #22 Syngr2 (MGP_SPRETEiJ_G0018314) #23 MGP_SPRETEiJ_G0018313 6030468B19Rik (MGP_SPRETEiJ_G0018312) #24 Tmc8 (MGP_SPRETEiJ_G0018311) #25 Tmc6 (MGP_SPRETEiJ_G0018310) #26 Tnrc6c (MGP_SPRETEiJ_G0018309) #27 MGP_SPRETEiJ_G0018308 Septin9 (MGP_SPRETEiJ_G0018307) #28 Sec14l1 (MGP_SPRETEiJ_G0018306) #29 Mgat5b (MGP_SPRETEiJ_G0018305) #30 Mfsd11 (MGP_SPRETEiJ_G0018304) #31 Srsf2 (MGP_SPRETEiJ_G0018303) #32 Mettl23 (MGP_SPRETEiJ_G0018302) #33 Jmjd6 (MGP_SPRETEiJ_G0018301) #34 Mxra7 (MGP_SPRETEiJ_G0018300) Mouse MODERN SPECIES 2 Engase (ENSMUSG00000033857) #8 C1qtnf1 (ENSMUSG00000017446) #9 Cant1 (ENSMUSG00000025575) #12 Lgals3bp (ENSMUSG00000033880) #10 Cep295nl (ENSMUSG00000076433) #11 Timp2 (ENSMUSG00000017466) Usp36 (ENSMUSG00000033909) #13 Cyth1 (ENSMUSG00000017132) #14 Dnah17 (ENSMUSG00000033987) #15 Pgs1 (ENSMUSG00000017715) #16 Socs3 (ENSMUSG00000053113) #17 Tha1 (ENSMUSG00000017713) #18 Tmem235 (ENSMUSG00000070330) #19 Birc5 (ENSMUSG00000017716) #20 Afmid (ENSMUSG00000017718) #21 Tk1 (ENSMUSG00000025574) #22 Gm20708 (ENSMUSG00000093485) Syngr2 (ENSMUSG00000048277) #23 6030468B19Rik (ENSMUSG00000025573) #24 Tmc8 (ENSMUSG00000050106) #25 Tmc6 (ENSMUSG00000025572) #26 Tnrc6c (ENSMUSG00000025571) #27 Septin9 (ENSMUSG00000059248) #28 Sec14l1 (ENSMUSG00000020823) #29 Mgat5b (ENSMUSG00000043857) #30 Mfsd11 (ENSMUSG00000020818) #31 Srsf2 (ENSMUSG00000034120) #32 Mettl23 (ENSMUSG00000090266) #33 Jmjd6 (ENSMUSG00000056962) #34 Mxra7 (ENSMUSG00000020814) St6galnac1 (ENSMUSG00000009588) #36 Ryukyu mouse MODERN SPECIES 2 Engase (MGP_CAROLIEiJ_G0017486) #8 C1qtnf1 (MGP_CAROLIEiJ_G0017485) #9 Cant1 (MGP_CAROLIEiJ_G0017484) #12 Lgals3bp (MGP_CAROLIEiJ_G0017483) #10 Cep295nl (MGP_CAROLIEiJ_G0017482) #11 Timp2 (MGP_CAROLIEiJ_G0017481) Usp36 (MGP_CAROLIEiJ_G0017480) #13 Cyth1 (MGP_CAROLIEiJ_G0017479) #14 Dnah17 (MGP_CAROLIEiJ_G0017478) #15 Pgs1 (MGP_CAROLIEiJ_G0017477) #16 Socs3 (MGP_CAROLIEiJ_G0017476) #17 Tha1 (MGP_CAROLIEiJ_G0017475) #18 Tmem235 (MGP_CAROLIEiJ_G0017474) #19 Birc5 (MGP_CAROLIEiJ_G0017473) #20 Afmid (MGP_CAROLIEiJ_G0017472) #21 Tk1 (MGP_CAROLIEiJ_G0017471) #22 MGP_CAROLIEiJ_G0017470 Syngr2 (MGP_CAROLIEiJ_G0017469) #23 6030468B19Rik (MGP_CAROLIEiJ_G0017468) #24 Tmc8 (MGP_CAROLIEiJ_G0017467) #25 Tmc6 (MGP_CAROLIEiJ_G0017466) #26 Tnrc6c (MGP_CAROLIEiJ_G0017465) #27 MGP_CAROLIEiJ_G0017464 Septin9 (MGP_CAROLIEiJ_G0017463) #28 Sec14l1 (MGP_CAROLIEiJ_G0017462) #29 MGP_CAROLIEiJ_G0017461 MGP_CAROLIEiJ_G0017460 Mgat5b (MGP_CAROLIEiJ_G0017459) #30 Mfsd11 (MGP_CAROLIEiJ_G0017458) #31 Srsf2 (MGP_CAROLIEiJ_G0017457) #32 MGP_CAROLIEiJ_G0017456 Shrew mouse MODERN SPECIES 5 Engase (MGP_PahariEiJ_G0018613) #8 C1qtnf1 (MGP_PahariEiJ_G0018612) #9 Cant1 (MGP_PahariEiJ_G0018611) #12 MGP_PahariEiJ_G0018610 #10 Cep295nl (MGP_PahariEiJ_G0018609) #11 Timp2 (MGP_PahariEiJ_G0018608) Usp36 (MGP_PahariEiJ_G0018607) #13 Cyth1 (MGP_PahariEiJ_G0018606) #14 Dnah17 (MGP_PahariEiJ_G0018605) #15 Pgs1 (MGP_PahariEiJ_G0018604) #16 Socs3 (MGP_PahariEiJ_G0018603) #17 Tha1 (MGP_PahariEiJ_G0018602) #18 Tmem235 (MGP_PahariEiJ_G0018601) #19 Birc5 (MGP_PahariEiJ_G0018600) #20 MGP_PahariEiJ_G0018599 #21 Tk1 (MGP_PahariEiJ_G0018598) #22 Syngr2 (MGP_PahariEiJ_G0018597) #23 6030468B19Rik (MGP_PahariEiJ_G0018596) #24 Tmc8 (MGP_PahariEiJ_G0018595) #25 Tmc6 (MGP_PahariEiJ_G0018594) #26 Tnrc6c (MGP_PahariEiJ_G0018593) #27 MGP_PahariEiJ_G0018592 Septin9 (MGP_PahariEiJ_G0018591) #28 Sec14l1 (MGP_PahariEiJ_G0018590) #29 Mgat5b (MGP_PahariEiJ_G0018589) #30 Mfsd11 (MGP_PahariEiJ_G0018588) #31 Srsf2 (MGP_PahariEiJ_G0018587) #32 MGP_PahariEiJ_G0018586 Jmjd6 (MGP_PahariEiJ_G0018585) #34 Mxra7 (MGP_PahariEiJ_G0018584) St6galnac1 (MGP_PahariEiJ_G0018583) #36