Bilateria	ANCESTRAL SPECIES																	ENSGT00390000011309 #22
Chordata	ANCESTRAL SPECIES																	ENSGT00390000011309 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00390000011309 #22
Gnathostomata	ANCESTRAL SPECIES	250						ENSGT00940000157519 #14	ENSGT00940000154076.A ##15	ENSGT00940000159717	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620 #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24
Euteleostomi	ANCESTRAL SPECIES	225				ENSGT00390000012872 #9	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00390000001663
Sarcopterygii	ANCESTRAL SPECIES	43			ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00390000015892	ENSGT00940000156853	ENSGT00390000002725	ENSGT00950000182933.A.a.a	ENSGT00950000183044.a.a.a	ENSGT00940000160070	ENSGT00940000159703
Tetrapoda	ANCESTRAL SPECIES	70			ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814
Amniota	ANCESTRAL SPECIES	32	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615
Mammalia	ANCESTRAL SPECIES	21	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883 #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Theria	ANCESTRAL SPECIES	9	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883 #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.e.a ##31	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Glires	ANCESTRAL SPECIES	3	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Rodentia	ANCESTRAL SPECIES	4	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Myomorpha	ANCESTRAL SPECIES		ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00860000135966
Muroidea	ANCESTRAL SPECIES		ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00860000135966
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00860000135966
Murinae	ANCESTRAL SPECIES	6	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00860000135966
Mus	ANCESTRAL SPECIES	2	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00860000135587 #29	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00940000170233 #37	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT00860000135913 #23	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00860000135587 #29	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00940000170233 #37	ENSGT00510000048008	ENSGT00940000156867
Ryukyu mouse	MODERN SPECIES	2	Engase (MGP_CAROLIEiJ_G0017486) #7	C1qtnf1 (MGP_CAROLIEiJ_G0017485) #8	Cant1 (MGP_CAROLIEiJ_G0017484) #9	Lgals3bp (MGP_CAROLIEiJ_G0017483) #10	Cep295nl (MGP_CAROLIEiJ_G0017482) #11	Timp2 (MGP_CAROLIEiJ_G0017481) #12	Usp36 (MGP_CAROLIEiJ_G0017480) #13	Cyth1 (MGP_CAROLIEiJ_G0017479) #14	Dnah17 (MGP_CAROLIEiJ_G0017478) #15	Pgs1 (MGP_CAROLIEiJ_G0017477) #16	Socs3 (MGP_CAROLIEiJ_G0017476) #17	Tha1 (MGP_CAROLIEiJ_G0017475) #18	Tmem235 (MGP_CAROLIEiJ_G0017474) #19	Birc5 (MGP_CAROLIEiJ_G0017473) #20	Afmid (MGP_CAROLIEiJ_G0017472) #21	Tk1 (MGP_CAROLIEiJ_G0017471) #22	MGP_CAROLIEiJ_G0017470 #23	Syngr2 (MGP_CAROLIEiJ_G0017469) #24	6030468B19Rik (MGP_CAROLIEiJ_G0017468) #25	Tmc8 (MGP_CAROLIEiJ_G0017467) #26	Tmc6 (MGP_CAROLIEiJ_G0017466) #27	Tnrc6c (MGP_CAROLIEiJ_G0017465) #28	MGP_CAROLIEiJ_G0017464 #29	Septin9 (MGP_CAROLIEiJ_G0017463) #30	Sec14l1 (MGP_CAROLIEiJ_G0017462) #31	MGP_CAROLIEiJ_G0017461 #32	MGP_CAROLIEiJ_G0017460 #33	Mgat5b (MGP_CAROLIEiJ_G0017459) #34	Mfsd11 (MGP_CAROLIEiJ_G0017458) #35	Srsf2 (MGP_CAROLIEiJ_G0017457) #36	MGP_CAROLIEiJ_G0017456 #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT00860000135913 #23	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00860000135587 #29	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Mus_C	ANCESTRAL SPECIES	21	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT00860000135913 #23	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00860000135587 #29	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Steppe mouse	MODERN SPECIES	1422															ENSMSIG00000013290 #21	Tk1 (ENSMSIG00000013357) #22	Syngr2 (ENSMSIG00000013373) #24
spretus	MODERN SPECIES	2	Engase (MGP_SPRETEiJ_G0018330) #7	C1qtnf1 (MGP_SPRETEiJ_G0018329) #8	Cant1 (MGP_SPRETEiJ_G0018328) #9	Lgals3bp (MGP_SPRETEiJ_G0018327) #10	Cep295nl (MGP_SPRETEiJ_G0018326) #11	Timp2 (MGP_SPRETEiJ_G0018325) #12	Usp36 (MGP_SPRETEiJ_G0018324) #13	Cyth1 (MGP_SPRETEiJ_G0018323) #14	Dnah17 (MGP_SPRETEiJ_G0018322) #15	Pgs1 (MGP_SPRETEiJ_G0018321) #16	Socs3 (MGP_SPRETEiJ_G0018320) #17	Tha1 (MGP_SPRETEiJ_G0018319) #18	Tmem235 (MGP_SPRETEiJ_G0018318) #19	Birc5 (MGP_SPRETEiJ_G0018317) #20	Afmid (MGP_SPRETEiJ_G0018316) #21	Tk1 (MGP_SPRETEiJ_G0018315) #22	Syngr2 (MGP_SPRETEiJ_G0018314) #24	MGP_SPRETEiJ_G0018313 #23	6030468B19Rik (MGP_SPRETEiJ_G0018312) #25	Tmc8 (MGP_SPRETEiJ_G0018311) #26	Tmc6 (MGP_SPRETEiJ_G0018310) #27	Tnrc6c (MGP_SPRETEiJ_G0018309) #28	MGP_SPRETEiJ_G0018308 #29	Septin9 (MGP_SPRETEiJ_G0018307) #30	Sec14l1 (MGP_SPRETEiJ_G0018306) #31	Mgat5b (MGP_SPRETEiJ_G0018305) #34	Mfsd11 (MGP_SPRETEiJ_G0018304) #35	Srsf2 (MGP_SPRETEiJ_G0018303) #36	Mettl23 (MGP_SPRETEiJ_G0018302)	Jmjd6 (MGP_SPRETEiJ_G0018301)	Mxra7 (MGP_SPRETEiJ_G0018300)
Mouse	MODERN SPECIES	2	Engase (ENSMUSG00000033857) #7	C1qtnf1 (ENSMUSG00000017446) #8	Cant1 (ENSMUSG00000025575) #9	Lgals3bp (ENSMUSG00000033880) #10	Cep295nl (ENSMUSG00000076433) #11	Timp2 (ENSMUSG00000017466) #12	Usp36 (ENSMUSG00000033909) #13	Cyth1 (ENSMUSG00000017132) #14	Dnah17 (ENSMUSG00000033987) #15	Pgs1 (ENSMUSG00000017715) #16	Socs3 (ENSMUSG00000053113) #17	Tha1 (ENSMUSG00000017713) #18	Tmem235 (ENSMUSG00000070330) #19	Birc5 (ENSMUSG00000017716) #20	Afmid (ENSMUSG00000017718) #21	Tk1 (ENSMUSG00000025574) #22	Gm20708 (ENSMUSG00000093485)	Syngr2 (ENSMUSG00000048277) #24	6030468B19Rik (ENSMUSG00000025573) #25	Tmc8 (ENSMUSG00000050106) #26	Tmc6 (ENSMUSG00000025572) #27	Tnrc6c (ENSMUSG00000025571) #28	Septin9 (ENSMUSG00000059248) #30	Sec14l1 (ENSMUSG00000020823) #31	Mgat5b (ENSMUSG00000043857) #34	Mfsd11 (ENSMUSG00000020818) #35	Srsf2 (ENSMUSG00000034120) #36	Mettl23 (ENSMUSG00000090266)	Jmjd6 (ENSMUSG00000056962)	Mxra7 (ENSMUSG00000020814)	St6galnac1 (ENSMUSG00000009588)
Shrew mouse	MODERN SPECIES	5	Engase (MGP_PahariEiJ_G0018613) #7	C1qtnf1 (MGP_PahariEiJ_G0018612) #8	Cant1 (MGP_PahariEiJ_G0018611) #9	MGP_PahariEiJ_G0018610 #10	Cep295nl (MGP_PahariEiJ_G0018609) #11	Timp2 (MGP_PahariEiJ_G0018608) #12	Usp36 (MGP_PahariEiJ_G0018607) #13	Cyth1 (MGP_PahariEiJ_G0018606) #14	Dnah17 (MGP_PahariEiJ_G0018605) #15	Pgs1 (MGP_PahariEiJ_G0018604) #16	Socs3 (MGP_PahariEiJ_G0018603) #17	Tha1 (MGP_PahariEiJ_G0018602) #18	Tmem235 (MGP_PahariEiJ_G0018601) #19	Birc5 (MGP_PahariEiJ_G0018600) #20	MGP_PahariEiJ_G0018599 #21	Tk1 (MGP_PahariEiJ_G0018598) #22	Syngr2 (MGP_PahariEiJ_G0018597) #24	6030468B19Rik (MGP_PahariEiJ_G0018596) #25	Tmc8 (MGP_PahariEiJ_G0018595) #26	Tmc6 (MGP_PahariEiJ_G0018594) #27	Tnrc6c (MGP_PahariEiJ_G0018593) #28	MGP_PahariEiJ_G0018592 #29	Septin9 (MGP_PahariEiJ_G0018591) #30	Sec14l1 (MGP_PahariEiJ_G0018590) #31	Mgat5b (MGP_PahariEiJ_G0018589) #34	Mfsd11 (MGP_PahariEiJ_G0018588) #35	Srsf2 (MGP_PahariEiJ_G0018587) #36	MGP_PahariEiJ_G0018586 #37	Jmjd6 (MGP_PahariEiJ_G0018585)	Mxra7 (MGP_PahariEiJ_G0018584)	St6galnac1 (MGP_PahariEiJ_G0018583)
Rat	DUPLICATION
Rat	DUPLICATION
Rat	MODERN SPECIES	1	Rbfox3 (ENSRNOG00000003386)	Engase (ENSRNOG00000027498) #7	C1qtnf1 (ENSRNOG00000003259) #8	Lgals3bp (ENSRNOG00000003217) #10	Timp2 (ENSRNOG00000033143) #11	Cant1 (ENSRNOG00000003239) #9	Usp36 (ENSRNOG00000028255) #13	Cyth1 (ENSRNOG00000043381) #14	Dnah17 (ENSRNOG00000003028) #15	Pgs1 (ENSRNOG00000002949) #16	Socs3 (ENSRNOG00000063373) #17	Tha1 (ENSRNOG00000045615) #18	Tmem235 (ENSRNOG00000048231) #19	Birc5 (ENSRNOG00000050819) #20	Afmid (ENSRNOG00000050205) #21	Tk1 (ENSRNOG00000047314) #22	Syngr2 (ENSRNOG00000050547) #24	LOC688282 (ENSRNOG00000045889) #25	Tmc8 (ENSRNOG00000046086) #26	Tmc6 (ENSRNOG00000053469) #27	Tnrc6c (ENSRNOG00000022395) #28	Septin9 (ENSRNOG00000002807) #30	Sec14l1 (ENSRNOG00000002722) #31	Mgat5b (ENSRNOG00000024954) #34	Mfsd11 (ENSRNOG00000000247) #35	Srsf2 (ENSRNOG00000000248) #36	Mettl23 (ENSRNOG00000000249)	Jmjd6 (ENSRNOG00000000250)	Mxra7 (ENSRNOG00000042915)	St6galnac1 (ENSRNOG00000000251)	St6galnac2 (ENSRNOG00000012083)
Rat	MODERN SPECIES	13	ENSRNOG00000063280	ENSRNOG00000062726	Sqor (ENSRNOG00000000172)	Slc30a4 (ENSRNOG00000000170)	Spata5l1 (ENSRNOG00000000169)	Gatm (ENSRNOG00000000168)	Tra2b-ps3 (ENSRNOG00000051627)	LOC120101644 (ENSRNOG00000068036)	LOC120101643 (ENSRNOG00000066870)	Slc28a2 (ENSRNOG00000028668)	Shf (ENSRNOG00000028685)	Duox1 (ENSRNOG00000033348)	Duoxa1 (ENSRNOG00000018005)	Duoxa2 (ENSRNOG00000017805)	Duox2 (ENSRNOG00000017395)	AC112350.1 (ENSRNOG00000047508) #22	Sord (ENSRNOG00000017291)	Terb2 (ENSRNOG00000037178)	Trim69 (ENSRNOG00000017157)	B2m (ENSRNOG00000017123)	Patl2 (ENSRNOG00000017061)	Spg11 (ENSRNOG00000021954)	Eif3j (ENSRNOG00000016459)	Ctdspl2 (ENSRNOG00000022141)	Golm2 (ENSRNOG00000016357)	Frmd5 (ENSRNOG00000016189)	Wdr76 (ENSRNOG00000022491)	Mfap1a (ENSRNOG00000065756)	Hypk (ENSRNOG00000065122)	Serinc4 (ENSRNOG00000015499)	Serf2 (ENSRNOG00000064233)
Rat	MODERN SPECIES	14	Garin1b (ENSRNOG00000006132)	Garin1a (ENSRNOG00000039383)	Impdh1 (ENSRNOG00000020032)	Prrt4 (ENSRNOG00000039388)	Rbm28 (ENSRNOG00000005468)	Lep (ENSRNOG00000045797)	Lrrc4 (ENSRNOG00000008098)	Snd1 (ENSRNOG00000031173)	Pax4 (ENSRNOG00000008020)	Fscn3 (ENSRNOG00000007942)	Arf5 (ENSRNOG00000007806)	Gcc1 (ENSRNOG00000007792)	Zfp800 (ENSRNOG00000007662)	ENSRNOG00000064958	Grm8 (ENSRNOG00000021468)	ENSRNOG00000063353 #22	Pot1 (ENSRNOG00000019986)	Gpr37 (ENSRNOG00000002524)	Tmem229a (ENSRNOG00000069945)	Hyal5 (ENSRNOG00000039466)	Spam1 (ENSRNOG00000007231)	Hyal4 (ENSRNOG00000007212)	Hyal6 (ENSRNOG00000021695)	ENSRNOG00000067771	Wasl (ENSRNOG00000006975)	Lmod2 (ENSRNOG00000045831)	Asb15 (ENSRNOG00000006365)	Ndufa5 (ENSRNOG00000071062)	Iqub (ENSRNOG00000021729)	Slc13a1 (ENSRNOG00000008121)	Tas2r118 (ENSRNOG00000021799)
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	15	Engase (ENSMOCG00000019185) #7	C1qtnf1 (ENSMOCG00000015186) #8	Cant1 (ENSMOCG00000021731) #9	Lgals3bp (ENSMOCG00000018929) #10	Cep295nl (ENSMOCG00000020591) #11	Timp2 (ENSMOCG00000018943) #12	Usp36 (ENSMOCG00000015065) #13	Cyth1 (ENSMOCG00000021929) #14	Dnah17 (ENSMOCG00000021106) #15	Pgs1 (ENSMOCG00000013984) #16	Socs3 (ENSMOCG00000021679) #17	Tha1 (ENSMOCG00000016182) #18	Tmem235 (ENSMOCG00000016117) #19	Birc5 (ENSMOCG00000016425) #20	Afmid (ENSMOCG00000015815) #21	ENSMOCG00000013626 #22	Syngr2 (ENSMOCG00000013728) #24	6030468B19Rik (ENSMOCG00000013691) #25	Tmc8 (ENSMOCG00000017792) #26	Tmc6 (ENSMOCG00000014633) #27	Tnrc6c (ENSMOCG00000015879) #28	ENSMOCG00000021875	Septin9 (ENSMOCG00000019545) #30	Sec14l1 (ENSMOCG00000017183) #31	Mgat5b (ENSMOCG00000014069) #34	Mfsd11 (ENSMOCG00000021977) #35	ENSMOCG00000013608	Mettl23 (ENSMOCG00000013930)	Jmjd6 (ENSMOCG00000015284)	Mxra7 (ENSMOCG00000013027)	St6galnac2 (ENSMOCG00000014576)
Prairie vole	MODERN SPECIES	87	Fezf1 (ENSMOCG00000004729)	Cadps2 (ENSMOCG00000022770)	Slc13a1 (ENSMOCG00000021479)	Iqub (ENSMOCG00000019365)	Ndufa5 (ENSMOCG00000007318)	Asb15 (ENSMOCG00000020491)	Lmod2 (ENSMOCG00000002701)	Wasl (ENSMOCG00000010725)	Hyal6 (ENSMOCG00000011551)	Hyal4 (ENSMOCG00000016868)	Spam1 (ENSMOCG00000019823)	Hyal5 (ENSMOCG00000005616)	Tmem229a (ENSMOCG00000005436)	ENSMOCG00000004830	ENSMOCG00000020573	ENSMOCG00000000208 #22	Gpr37 (ENSMOCG00000004144)	Pot1a (ENSMOCG00000013730)	ENSMOCG00000003837	ENSMOCG00000005667	Grm8 (ENSMOCG00000012255)	ENSMOCG00000014942	ENSMOCG00000004985	Gcc1 (ENSMOCG00000022632)	Arf5 (ENSMOCG00000022861)	Fscn3 (ENSMOCG00000005936)	Pax4 (ENSMOCG00000018632)	Snd1 (ENSMOCG00000005040)	Lrrc4 (ENSMOCG00000005637)	Lep (ENSMOCG00000015600)	Rbm28 (ENSMOCG00000014615)
Northern American deer mouse	MODERN SPECIES	21	Engase (ENSPEMG00000014032) #7	C1qtnf1 (ENSPEMG00000026107) #8	Cant1 (ENSPEMG00000018679) #9	Lgals3bp (ENSPEMG00000016195) #10	Timp2 (ENSPEMG00000026701) #12	Usp36 (ENSPEMG00000016433) #13	Cyth1 (ENSPEMG00000010161) #14	Dnah17 (ENSPEMG00000012181) #15	Pgs1 (ENSPEMG00000018438) #16	Socs3 (ENSPEMG00000031054) #17	ENSPEMG00000006732	Tha1 (ENSPEMG00000010615) #18	Tmem235 (ENSPEMG00000007972) #19	Birc5 (ENSPEMG00000007142) #20	Afmid (ENSPEMG00000013489) #21	Tk1 (ENSPEMG00000014295) #22	Syngr2 (ENSPEMG00000010557) #24	6030468B19Rik (ENSPEMG00000005757) #25	Tmc8 (ENSPEMG00000012329) #26	Tmc6 (ENSPEMG00000012089) #27	ENSPEMG00000027443	Tnrc6c (ENSPEMG00000009785) #28	Septin9 (ENSPEMG00000016176) #30	Sec14l1 (ENSPEMG00000011090) #31	Mgat5b (ENSPEMG00000005373) #34	Mfsd11 (ENSPEMG00000014004) #35	Mettl23 (ENSPEMG00000015725)	Jmjd6 (ENSPEMG00000001289)	Mxra7 (ENSPEMG00000015097)	St6galnac1 (ENSPEMG00000016199)	St6galnac2 (ENSPEMG00000016035)
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	722	Fbxl13 (ENSMAUG00000004286)	Lrrc17 (ENSMAUG00000004793)	Fam185a (ENSMAUG00000006573)	Ccdc146 (ENSMAUG00000008882)	Fgl2 (ENSMAUG00000017628)	Gsap (ENSMAUG00000001104)	Ptpn12 (ENSMAUG00000000239)	Rsbn1l (ENSMAUG00000016941)	Tmem60 (ENSMAUG00000000985)	Phtf2 (ENSMAUG00000014092)	Magi2 (ENSMAUG00000013050)	Gnai1 (ENSMAUG00000000903)	Gnat3 (ENSMAUG00000007965)	Cd36 (ENSMAUG00000000590)	Sema3c (ENSMAUG00000013450)	ENSMAUG00000003314 #22	Cdhr17 (ENSMAUG00000016818)	Hgf (ENSMAUG00000007722)	Cacna2d1 (ENSMAUG00000003964)	ENSMAUG00000011469
Golden Hamster	MODERN SPECIES	637	Engase (ENSMAUG00000015936) #7	C1qtnf1 (ENSMAUG00000012075) #8	Cant1 (ENSMAUG00000012573) #9	Lgals3bp (ENSMAUG00000014262) #10	Timp2 (ENSMAUG00000013106) #12	Cep295nl (ENSMAUG00000008712) #11	Usp36 (ENSMAUG00000021889) #13	Cyth1 (ENSMAUG00000021978) #14	Dnah17 (ENSMAUG00000004455) #15	Pgs1 (ENSMAUG00000009274) #16	Socs3 (ENSMAUG00000010984) #17	Tha1 (ENSMAUG00000017293) #18	Tmem235 (ENSMAUG00000018596) #19	Birc5 (ENSMAUG00000021983) #20	Afmid (ENSMAUG00000022239) #21	ENSMAUG00000020961 #22	Syngr2 (ENSMAUG00000020436) #24	6030468B19Rik (ENSMAUG00000021499) #25	Tmc8 (ENSMAUG00000022139) #26	Tmc6 (ENSMAUG00000022231) #27	Tnrc6c (ENSMAUG00000021618) #28	Septin9 (ENSMAUG00000021555) #30	ENSMAUG00000001914 #31	ENSMAUG00000018281	Mgat5b (ENSMAUG00000022211) #34	Mfsd11 (ENSMAUG00000002082) #35	Srsf2 (ENSMAUG00000022242) #36	Mettl23 (ENSMAUG00000001468)	Jmjd6 (ENSMAUG00000011301)	Mxra7 (ENSMAUG00000011987)	St6galnac1 (ENSMAUG00000007479)
Chinese hamster chok1gshd	MODERN SPECIES	33	C1qtnf1 (ENSCGRG00001013304) #8	Cant1 (ENSCGRG00001017568) #9	Lgals3bp (ENSCGRG00001017663) #10	Cep295nl (ENSCGRG00001014121) #11	Timp2 (ENSCGRG00001020133) #12	Usp36 (ENSCGRG00001022244) #13	Cyth1 (ENSCGRG00001012660) #14	ENSCGRG00001024575	Dnah17 (ENSCGRG00001007869) #15	PGS1 (ENSCGRG00001019173) #16	Socs3 (ENSCGRG00001002299) #17	Tha1 (ENSCGRG00001015743) #18	Tmem235 (ENSCGRG00001003448) #19	ENSCGRG00001024015 #20	Afmid (ENSCGRG00001014003) #21	TK1 (ENSCGRG00001018904) #22	Syngr2 (ENSCGRG00001011646) #24	6030468B19Rik (ENSCGRG00001002193) #25	Tmc8 (ENSCGRG00001023341) #26	Tmc6 (ENSCGRG00001003665) #27	Tnrc6c (ENSCGRG00001022686) #28	Septin9 (ENSCGRG00001008836) #30	Sec14l1 (ENSCGRG00001017968) #31	Mgat5b (ENSCGRG00001004558) #34	Mfsd11 (ENSCGRG00001020193) #35	Srsf2 (ENSCGRG00001023483) #36	Mettl23 (ENSCGRG00001023289)	Jmjd6 (ENSCGRG00001018648)	Mxra7 (ENSCGRG00001017342)	St6galnac1 (ENSCGRG00001010902)	St6galnac2 (ENSCGRG00001014926)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1417																Tk1 (ENSNGAG00000012392) #22	Syngr2 (ENSNGAG00000012963) #24	6030468B19Rik (ENSNGAG00000014080) #25	Tmc8 (ENSNGAG00000018154) #26	Tmc6 (ENSNGAG00000021125) #27	Tnrc6c (ENSNGAG00000012203) #28
Lesser Egyptian jerboa	MODERN SPECIES	56	Enpp7 (ENSJJAG00000015722)	Rbfox3 (ENSJJAG00000014167)	Engase (ENSJJAG00000017419) #7	C1qtnf1 (ENSJJAG00000015196) #8	Cant1 (ENSJJAG00000014187) #9	Lgals3bp (ENSJJAG00000013378) #10	Cep295nl (ENSJJAG00000014899) #11	Timp2 (ENSJJAG00000014042) #12	ENSJJAG00000015144 #13	Cyth1 (ENSJJAG00000023421) #14	Dnah17 (ENSJJAG00000022480) #15	Pgs1 (ENSJJAG00000014947) #16	Socs3 (ENSJJAG00000005819) #17	Tmem235 (ENSJJAG00000015038) #19	Afmid (ENSJJAG00000012806) #21	Tk1 (ENSJJAG00000014243) #22	Syngr2 (ENSJJAG00000015399) #24	6030468B19Rik (ENSJJAG00000013183) #25	Tmc8 (ENSJJAG00000014418) #26	Tmc6 (ENSJJAG00000013911) #27	Tnrc6c (ENSJJAG00000017055) #28	Septin9 (ENSJJAG00000015931) #30	Sec14l1 (ENSJJAG00000014775) #31	Mgat5b (ENSJJAG00000013209) #34	Mfsd11 (ENSJJAG00000013159) #35	Srsf2 (ENSJJAG00000013794) #36	Mettl23 (ENSJJAG00000012888)	Jmjd6 (ENSJJAG00000022867)	Mxra7 (ENSJJAG00000012046)	St6galnac1 (ENSJJAG00000014221)	St6galnac2 (ENSJJAG00000011713)
Kangaroo rat	MODERN SPECIES	326	Cbx2 (ENSDORG00000007598)	Rbfox3 (ENSDORG00000005352)	Engase (ENSDORG00000005347) #7	C1qtnf1 (ENSDORG00000030086) #8	Cant1 (ENSDORG00000005395) #9	ENSDORG00000005393	Timp2 (ENSDORG00000023383) #12	ENSDORG00000001610 #13	Cyth1 (ENSDORG00000008525) #14	Dnah17 (ENSDORG00000007811) #15	Pgs1 (ENSDORG00000011674) #16	Socs3 (ENSDORG00000015512) #17	Tha1 (ENSDORG00000025578) #18	Birc5 (ENSDORG00000004314) #20	Afmid (ENSDORG00000012803) #21	Tk1 (ENSDORG00000012808) #22	Syngr2 (ENSDORG00000012812) #24	6030468B19Rik (ENSDORG00000006702) #25	Tmc8 (ENSDORG00000006694) #26	ENSDORG00000026735 #27	Tnrc6c (ENSDORG00000004558) #28	Septin9 (ENSDORG00000028516) #30	Sec14l1 (ENSDORG00000007026) #31	Mgat5b (ENSDORG00000012956) #34	Mfsd11 (ENSDORG00000014461) #35	Srsf2 (ENSDORG00000014460) #36	Mettl23 (ENSDORG00000014458)	Jmjd6 (ENSDORG00000014457)	ENSDORG00000027007	ENSDORG00000010250	St6galnac2 (ENSDORG00000027435)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930.d	ENSGT00860000135966	ENSGT00940000160433
Marmotini	ANCESTRAL SPECIES	36	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930.d	ENSGT00860000135966	ENSGT00940000160433
Alpin marmot	MODERN SPECIES	90	ENGASE (ENSMMMG00000007432) #7	C1QTNF1 (ENSMMMG00000007453) #8	CANT1 (ENSMMMG00000007459) #9	LGALS3BP (ENSMMMG00000007464) #10	ENSMMMG00000007473 #11	TIMP2 (ENSMMMG00000007493) #12	USP36 (ENSMMMG00000007583) #13	CYTH1 (ENSMMMG00000007804) #14	DNAH17 (ENSMMMG00000007890) #15	PGS1 (ENSMMMG00000008380) #16	SOCS3 (ENSMMMG00000008401) #17	ENSMMMG00000008408 #18	TMEM235 (ENSMMMG00000008425) #19	ENSMMMG00000008432 #20	AFMID (ENSMMMG00000008457) #21	TK1 (ENSMMMG00000008479) #22	SYNGR2 (ENSMMMG00000008495) #24	TMC8 (ENSMMMG00000008504) #26	TMC6 (ENSMMMG00000008802) #27	TNRC6C (ENSMMMG00000008824) #28	SEPTIN9 (ENSMMMG00000008882) #30	SEC14L1 (ENSMMMG00000008919) #31	ENSMMMG00000008987 #34	MFSD11 (ENSMMMG00000008997) #35	METTL23 (ENSMMMG00000009040)	JMJD6 (ENSMMMG00000009045)	ENSMMMG00000009080	ENSMMMG00000009086	ST6GALNAC2 (ENSMMMG00000009095)	PRCD (ENSMMMG00000009119)	CYGB (ENSMMMG00000009125)
Marmotini_b	ANCESTRAL SPECIES	20	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930.d	ENSGT00860000135966	ENSGT00940000160433
Squirrel	MODERN SPECIES	194	RBFOX3 (ENSSTOG00000026817)	ENGASE (ENSSTOG00000003630) #7	C1QTNF1 (ENSSTOG00000019875) #8	CANT1 (ENSSTOG00000028282) #9	LGALS3BP (ENSSTOG00000027058) #10	TIMP2 (ENSSTOG00000016084) #12	USP36 (ENSSTOG00000016082) #13	CYTH1 (ENSSTOG00000004587) #14	DNAH17 (ENSSTOG00000026418) #15	PGS1 (ENSSTOG00000010898) #16	SOCS3 (ENSSTOG00000010896) #17	ENSSTOG00000022292 #18	TMEM235 (ENSSTOG00000023248) #19	BIRC5 (ENSSTOG00000020326) #20	AFMID (ENSSTOG00000016387) #21	TK1 (ENSSTOG00000023812) #22	SYNGR2 (ENSSTOG00000006834) #24	TMC8 (ENSSTOG00000028601) #26	TMC6 (ENSSTOG00000026885) #27	TNRC6C (ENSSTOG00000009101) #28	ENSSTOG00000027666 #30	SEC14L1 (ENSSTOG00000014530) #31	MGAT5B (ENSSTOG00000022165) #34	MFSD11 (ENSSTOG00000001451) #35	ENSSTOG00000025265 #36	METTL23 (ENSSTOG00000001447)	JMJD6 (ENSSTOG00000001443)	ST6GALNAC1 (ENSSTOG00000027866)	ENSSTOG00000031427	ST6GALNAC2 (ENSSTOG00000020786)	PRCD (ENSSTOG00000030365)
Arctic ground squirrel	MODERN SPECIES	381	ENGASE (ENSUPAG00010004098) #7	C1QTNF1 (ENSUPAG00010004088) #8	CANT1 (ENSUPAG00010004050) #9	LGALS3BP (ENSUPAG00010004036) #10	ENSUPAG00010004031 #11	TIMP2 (ENSUPAG00010004023) #12	USP36 (ENSUPAG00010003894) #13	CYTH1 (ENSUPAG00010003849) #14	DNAH17 (ENSUPAG00010003743) #15	PGS1 (ENSUPAG00010003725) #16	SOCS3 (ENSUPAG00010003713) #17	ENSUPAG00010003692 #18	TMEM235 (ENSUPAG00010003686) #19	BIRC5 (ENSUPAG00010003664) #20	AFMID (ENSUPAG00010003638) #21	TK1 (ENSUPAG00010003627) #22	SYNGR2 (ENSUPAG00010003617) #24	TMC8 (ENSUPAG00010003599) #26	TMC6 (ENSUPAG00010003577) #27	TNRC6C (ENSUPAG00010003478) #28
Eurasian red squirrel	MODERN SPECIES	12	RBFOX3 (ENSSVLG00005018276)	ENGASE (ENSSVLG00005018710) #7	C1QTNF1 (ENSSVLG00005018845) #8	CANT1 (ENSSVLG00005018886) #9	LGALS3BP (ENSSVLG00005018927) #10	TIMP2 (ENSSVLG00005018989) #12	ENSSVLG00005019048 #11	USP36 (ENSSVLG00005019109) #13	CYTH1 (ENSSVLG00005019193) #14	DNAH17 (ENSSVLG00005019564) #15	PGS1 (ENSSVLG00005020209) #16	SOCS3 (ENSSVLG00005020270) #17	ENSSVLG00005020294 #18	BIRC5 (ENSSVLG00005020489) #20	AFMID (ENSSVLG00005020546) #21	TK1 (ENSSVLG00005020609) #22	SYNGR2 (ENSSVLG00005020697) #24	TMC8 (ENSSVLG00005020762) #26	TMC6 (ENSSVLG00005020990) #27	TNRC6C (ENSSVLG00005021351) #28	SEPTIN9 (ENSSVLG00005021788) #30	SEC14L1 (ENSSVLG00005021864) #31	MGAT5B (ENSSVLG00005021925) #34	MFSD11 (ENSSVLG00005022242) #35	ENSSVLG00005022400 #36	METTL23 (ENSSVLG00005022436)	JMJD6 (ENSSVLG00005022517)	ENSSVLG00005022580	ST6GALNAC1 (ENSSVLG00005022612)	ST6GALNAC2 (ENSSVLG00005022754)	PRCD (ENSSVLG00005022841)
Hystricomorpha	ANCESTRAL SPECIES	24	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373.k #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Hystricomorpha_a	ANCESTRAL SPECIES	19	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373.k #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Guinea pig	MODERN SPECIES	76	CBX2 (ENSCPOG00000005599)	RBFOX3 (ENSCPOG00000021703)	ENGASE (ENSCPOG00000010324) #7	C1QTNF1 (ENSCPOG00000034550) #8	CANT1 (ENSCPOG00000011130) #9	LGALS3BP (ENSCPOG00000024999) #10	TIMP2 (ENSCPOG00000008663) #12	USP36 (ENSCPOG00000010458) #13	CYTH1 (ENSCPOG00000000741) #14	DNAH17 (ENSCPOG00000010616) #15	PGS1 (ENSCPOG00000027294) #16	SOCS3 (ENSCPOG00000004247) #17	ENSCPOG00000021388 #18	BIRC5 (ENSCPOG00000040469) #20	AFMID (ENSCPOG00000021034) #21	TK1 (ENSCPOG00000033845) #22	SYNGR2 (ENSCPOG00000034871) #24	ENSCPOG00000000474 #25	TMC8 (ENSCPOG00000000473) #26	TMC6 (ENSCPOG00000000461) #27	TNRC6C (ENSCPOG00000000467) #28	SEPTIN9 (ENSCPOG00000012711) #30	SEC14L1 (ENSCPOG00000002017) #31	MGAT5B (ENSCPOG00000008729) #34	ENSCPOG00000020782	MFSD11 (ENSCPOG00000004236) #35	JMJD6 (ENSCPOG00000004229)	ENSCPOG00000032632	ST6GALNAC1 (ENSCPOG00000002420)	ENSCPOG00000024236	ENSCPOG00000024343
Hystricomorpha_b	ANCESTRAL SPECIES	12	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373.k #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Degu	MODERN SPECIES	74														SOCS3 (ENSODEG00000019991) #17	ENSODEG00000011695 #18	TK1 (ENSODEG00000011369) #22	SYNGR2 (ENSODEG00000013460) #24	ENSODEG00000011422 #27	TNRC6C (ENSODEG00000012499) #28	ENSODEG00000019785	SEPTIN9 (ENSODEG00000012340) #30	ENSODEG00000019912	SEC14L1 (ENSODEG00000012264) #31	MGAT5B (ENSODEG00000010875) #34	MFSD11 (ENSODEG00000011918) #35	ENSODEG00000014748 #36	METTL23 (ENSODEG00000011047)	JMJD6 (ENSODEG00000011632)	ENSODEG00000010744	CYGB (ENSODEG00000011488)	RHBDF2 (ENSODEG00000010976)
Long-tailed chinchilla	MODERN SPECIES	213	ENGASE (ENSCLAG00000011041) #7	C1QTNF1 (ENSCLAG00000009956) #8	CANT1 (ENSCLAG00000010539) #9	LGALS3BP (ENSCLAG00000011131) #10	TIMP2 (ENSCLAG00000011284) #12	USP36 (ENSCLAG00000012571) #13	CYTH1 (ENSCLAG00000010429) #14	DNAH17 (ENSCLAG00000009080) #15	PGS1 (ENSCLAG00000014556) #16	SOCS3 (ENSCLAG00000011911) #17	ENSCLAG00000014687	ENSCLAG00000010325 #18	TMEM235 (ENSCLAG00000010882) #19	BIRC5 (ENSCLAG00000011970) #20	AFMID (ENSCLAG00000012562) #21	TK1 (ENSCLAG00000008258) #22	SYNGR2 (ENSCLAG00000008491) #24	ENSCLAG00000011725 #25	TMC8 (ENSCLAG00000012843) #26	TMC6 (ENSCLAG00000015028) #27	TNRC6C (ENSCLAG00000011139) #28	SEPTIN9 (ENSCLAG00000016684) #30	SEC14L1 (ENSCLAG00000017271) #31	MGAT5B (ENSCLAG00000013346) #34	MFSD11 (ENSCLAG00000007261) #35	ENSCLAG00000012450 #36	JMJD6 (ENSCLAG00000010162)	ENSCLAG00000008140	ST6GALNAC1 (ENSCLAG00000007640)	ST6GALNAC2 (ENSCLAG00000010327)	PRCD (ENSCLAG00000009358)
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000050047	ENGASE (ENSHGLG00000012682) #7	C1QTNF1 (ENSHGLG00000012387) #8	CANT1 (ENSHGLG00000045626) #9	LGALS3BP (ENSHGLG00000009356) #10	TIMP2 (ENSHGLG00000044441) #12	USP36 (ENSHGLG00000005619) #13	CYTH1 (ENSHGLG00000006215) #14	DNAH17 (ENSHGLG00000016434) #15	ENSHGLG00000014896 #16	SOCS3 (ENSHGLG00000040753) #17	ENSHGLG00000040219 #18	BIRC5 (ENSHGLG00000010313) #20	AFMID (ENSHGLG00000008814) #21	ENSHGLG00000042507	TK1 (ENSHGLG00000008362) #22	SYNGR2 (ENSHGLG00000008306) #24	C17orf99 (ENSHGLG00000009374) #25	TMC8 (ENSHGLG00000008951) #26	TMC6 (ENSHGLG00000006996) #27	TNRC6C (ENSHGLG00000004809) #28	ENSHGLG00000045488	SEPTIN9 (ENSHGLG00000034038) #30	SEC14L1 (ENSHGLG00000017293) #31	ENSHGLG00000040836	MGAT5B (ENSHGLG00000017285) #34	MFSD11 (ENSHGLG00000017219) #35	ENSHGLG00000017262 #36	METTL23 (ENSHGLG00000034053)	JMJD6 (ENSHGLG00000013611)	ENSHGLG00000012861
Lagomorpha	ANCESTRAL SPECIES	261											ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00950000183754	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26
Rabbit	MODERN SPECIES	1003												ENSOCUG00000025890 #18	ENSOCUG00000025794 #19	ENSOCUG00000031126 #20	ENSOCUG00000010048	TK1 (ENSOCUG00000010046) #22	ENSOCUG00000004394 #25	ENSOCUG00000027250 #24
Pika	MODERN SPECIES	3136															ENSOPRG00000008137 #21	TK1 (ENSOPRG00000008125) #22	SYNGR2 (ENSOPRG00000008109) #24	ENSOPRG00000008100 #25	TMC8 (ENSOPRG00000008077) #26
Tree shrew	MODERN SPECIES	5466														ENSTBEG00000017605	ENSTBEG00000017573 #21	TK1 (ENSTBEG00000017561) #22	SYNGR2 (ENSTBEG00000017553) #24	TMC8 (ENSTBEG00000017530) #26	ENSTBEG00000017496 #27
Primates	ANCESTRAL SPECIES	3	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.e.a ##31	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433	ENSGT00860000135966
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433	ENSGT00860000135966
Mouse lemur	MODERN SPECIES	7	SLC26A11 (ENSMICG00000036627)	ENSMICG00000040049	C1QTNF1 (ENSMICG00000003107) #8	CANT1 (ENSMICG00000029823) #9	LGALS3BP (ENSMICG00000041643) #10	TIMP2 (ENSMICG00000032201) #12	ENSMICG00000003252 #13	CYTH1 (ENSMICG00000035957) #14	ENSMICG00000006606	DNAH17 (ENSMICG00000014314) #15	PGS1 (ENSMICG00000014301) #16	SOCS3 (ENSMICG00000046219) #17	TMEM235 (ENSMICG00000003104) #19	BIRC5 (ENSMICG00000026802) #20	AFMID (ENSMICG00000029017) #21	TK1 (ENSMICG00000016775) #22	SYNGR2 (ENSMICG00000030572) #24	TMC8 (ENSMICG00000003982) #26	TMC6 (ENSMICG00000003967) #27	TNRC6C (ENSMICG00000003952) #28	SEPTIN9 (ENSMICG00000008088) #30	SEC14L1 (ENSMICG00000012145) #31	ENSMICG00000027170	MGAT5B (ENSMICG00000003382) #34	MFSD11 (ENSMICG00000016959) #35	SRSF2 (ENSMICG00000016956) ##36	METTL23 (ENSMICG00000016953)	JMJD6 (ENSMICG00000016945)	ENSMICG00000032525	ST6GALNAC1 (ENSMICG00000030490)	ST6GALNAC2 (ENSMICG00000007518)
Lemuriformes_a	ANCESTRAL SPECIES	18	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00860000135966	ENSGT00940000160433
Greater bamboo lemur	MODERN SPECIES	596	RBFOX3 (ENSPSMG00000005627)	ENGASE (ENSPSMG00000005652) #7	C1QTNF1 (ENSPSMG00000005663) #8	CANT1 (ENSPSMG00000005670) #9	LGALS3BP (ENSPSMG00000005685) #10	TIMP2 (ENSPSMG00000005696) #12	CEP295NL (ENSPSMG00000005704) #11	USP36 (ENSPSMG00000005780) #13	CYTH1 (ENSPSMG00000005978) #14	DNAH17 (ENSPSMG00000006360) #15	PGS1 (ENSPSMG00000006416) #16	SOCS3 (ENSPSMG00000006468) #17	TMEM235 (ENSPSMG00000006491) #19	BIRC5 (ENSPSMG00000006517) #20	ENSPSMG00000006529	TK1 (ENSPSMG00000006548) #22	SYNGR2 (ENSPSMG00000006578) #24	TMC8 (ENSPSMG00000006589) #26	TMC6 (ENSPSMG00000006606) #27	TNRC6C (ENSPSMG00000006735) #28	SEPTIN9 (ENSPSMG00000007174) #30	SEC14L1 (ENSPSMG00000007563) #31	ENSPSMG00000007602	MGAT5B (ENSPSMG00000007690) #34	MFSD11 (ENSPSMG00000007832) #35	SRSF2 (ENSPSMG00000007886) ##36	METTL23 (ENSPSMG00000007896)	JMJD6 (ENSPSMG00000007957)	ENSPSMG00000007979	ST6GALNAC1 (ENSPSMG00000007990)
Coquerels sifaka	MODERN SPECIES	851					ENSPCOG00000020167 #10	ENSPCOG00000022310 #11	TIMP2 (ENSPCOG00000018120) #12	USP36 (ENSPCOG00000010763) #13	CYTH1 (ENSPCOG00000020863) #14	DNAH17 (ENSPCOG00000013780) #15	PGS1 (ENSPCOG00000019784) #16	SOCS3 (ENSPCOG00000026066) #17	TMEM235 (ENSPCOG00000017996) #19	BIRC5 (ENSPCOG00000021863) #20	AFMID (ENSPCOG00000027203) #21	TK1 (ENSPCOG00000017392) #22	SYNGR2 (ENSPCOG00000016526) #24	TMC8 (ENSPCOG00000027827) #26	TMC6 (ENSPCOG00000020342) #27	TNRC6C (ENSPCOG00000021451) #28
Bushbaby	MODERN SPECIES	133	ENPP7 (ENSOGAG00000016467)	RBFOX3 (ENSOGAG00000029595)	ENGASE (ENSOGAG00000015315) #7	C1QTNF1 (ENSOGAG00000015313) #8	CANT1 (ENSOGAG00000010805) #9	LGALS3BP (ENSOGAG00000008869) #10	TIMP2 (ENSOGAG00000006918) #12	USP36 (ENSOGAG00000006913) #13	CYTH1 (ENSOGAG00000006909) #14	DNAH17 (ENSOGAG00000011341) #15	PGS1 (ENSOGAG00000011339) #16	SOCS3 (ENSOGAG00000032054) #17	TMEM235 (ENSOGAG00000028357) #19	BIRC5 (ENSOGAG00000034095) #20	AFMID (ENSOGAG00000012554) #21	TK1 (ENSOGAG00000012550) #22	SYNGR2 (ENSOGAG00000012549) #24	TMC8 (ENSOGAG00000012546) #26	TMC6 (ENSOGAG00000033029) #27	TNRC6C (ENSOGAG00000007197) #28	SEPTIN9 (ENSOGAG00000003740) #30	SEC14L1 (ENSOGAG00000002384) #31	MGAT5B (ENSOGAG00000002382) #34	MFSD11 (ENSOGAG00000013289) #35	SRSF2 (ENSOGAG00000028335) ##36	METTL23 (ENSOGAG00000005663)	JMJD6 (ENSOGAG00000033219)	ENSOGAG00000034168	ST6GALNAC1 (ENSOGAG00000001559)	ST6GALNAC2 (ENSOGAG00000008840)	PRCD (ENSOGAG00000033858)
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.e.a ##31	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Tarsier	MODERN SPECIES	4852														BIRC5 (ENSTSYG00000026744) #20	ENSTSYG00000026347	TK1 (ENSTSYG00000009450) #22	SYNGR2 (ENSTSYG00000032357) #24	C17orf99 (ENSTSYG00000027081) #25	TMC8 (ENSTSYG00000008476) #26	TMC6 (ENSTSYG00000030311) #27	TNRC6C (ENSTSYG00000005403) #28	FMOD (ENSTSYG00000002491)	BTG2 (ENSTSYG00000036798)	CHIT1 (ENSTSYG00000006195)	CHI3L1 (ENSTSYG00000005599)	MYBPH (ENSTSYG00000012174)	ADORA1 (ENSTSYG00000027513)	MYOG (ENSTSYG00000032390)	PPFIA4 (ENSTSYG00000013208)	TMEM183A (ENSTSYG00000026847)	CYB5R1 (ENSTSYG00000003161)
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.e.a ##31	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537.f #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195.g #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
Cebidae	ANCESTRAL SPECIES	25	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537.f #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195.g #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Marmoset	MODERN SPECIES	17	CBX8 (ENSCJAG00000017786)	ENPP7 (ENSCJAG00000009621)	ENSCJAG00000009563	ENGASE (ENSCJAG00000009541) #7	C1QTNF1 (ENSCJAG00000045764) #8	CANT1 (ENSCJAG00000019644) #9	LGALS3BP (ENSCJAG00000019635) #10	TIMP2 (ENSCJAG00000064894) #12	USP36 (ENSCJAG00000019596) #13	CYTH1 (ENSCJAG00000019557) #14	DNAH17 (ENSCJAG00000019525) #15	ENSCJAG00000087262 #17	PGS1 (ENSCJAG00000019509) #16	BIRC5 (ENSCJAG00000045315) #20	AFMID (ENSCJAG00000034500) #21	TK1 (ENSCJAG00000019485) #22	SYNGR2 (ENSCJAG00000045337) #24	TMC8 (ENSCJAG00000019451) #26	TMC6 (ENSCJAG00000019413) #27	TNRC6C (ENSCJAG00000019431) #28	ENSCJAG00000070577	SEPTIN9 (ENSCJAG00000013203) #30	SEC14L1 (ENSCJAG00000013261) #31	MGAT5B (ENSCJAG00000013327) #34	MFSD11 (ENSCJAG00000013361) #35	SRSF2 (ENSCJAG00000041154) ##36	METTL23 (ENSCJAG00000013434)	JMJD6 (ENSCJAG00000013442)	ENSCJAG00000047281	ENSCJAG00000063455	ST6GALNAC1 (ENSCJAG00000013495)
Cebidae_a	ANCESTRAL SPECIES	17	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537.f #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195.g #30	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
Capuchin	MODERN SPECIES	36	C1QTNF1 (ENSCCAG00000016110) #8	CANT1 (ENSCCAG00000034107) #9	LGALS3BP (ENSCCAG00000026455) #10	TIMP2 (ENSCCAG00000035485) #12	CEP295NL (ENSCCAG00000021554) #11	USP36 (ENSCCAG00000037796) #13	CYTH1 (ENSCCAG00000018796) #14	ENSCCAG00000034027	DNAH17 (ENSCCAG00000036963) #15	PGS1 (ENSCCAG00000022077) #16	SOCS3 (ENSCCAG00000008960) #17	ENSCCAG00000035640	TMEM235 (ENSCCAG00000036632) #19	ENSCCAG00000020513 #20	AFMID (ENSCCAG00000029883) #21	TK1 (ENSCCAG00000023376) #22	SYNGR2 (ENSCCAG00000024503) #24	C17orf99 (ENSCCAG00000031882) #25	TMC8 (ENSCCAG00000033485) #26	TMC6 (ENSCCAG00000027717) #27	TNRC6C (ENSCCAG00000030524) #28	ENSCCAG00000020315	SEPTIN9 (ENSCCAG00000028621) #30	ENSCCAG00000015305	SEC14L1 (ENSCCAG00000020866) #31	MGAT5B (ENSCCAG00000027779) #34	MFSD11 (ENSCCAG00000033114) #35	SRSF2 (ENSCCAG00000037532) ##36	METTL23 (ENSCCAG00000033973)	JMJD6 (ENSCCAG00000022260)	ENSCCAG00000033820
Bolivian squirrel monkey	MODERN SPECIES	88	ENPP7 (ENSSBOG00000025437)	RBFOX3 (ENSSBOG00000031591)	ENGASE (ENSSBOG00000023879) #7	C1QTNF1 (ENSSBOG00000026478) #8	CANT1 (ENSSBOG00000030501) #9	LGALS3BP (ENSSBOG00000019415) #10	CEP295NL (ENSSBOG00000033219) #11	TIMP2 (ENSSBOG00000028207) #12	USP36 (ENSSBOG00000031331) #13	CYTH1 (ENSSBOG00000004861) #14	DNAH17 (ENSSBOG00000028165) #15	PGS1 (ENSSBOG00000020978) #16	SOCS3 (ENSSBOG00000007292) #17	BIRC5 (ENSSBOG00000026589) #20	AFMID (ENSSBOG00000026610) #21	TK1 (ENSSBOG00000019755) #22	SYNGR2 (ENSSBOG00000036006) #24	C17orf99 (ENSSBOG00000023684) #25	TMC8 (ENSSBOG00000018999) #26	TMC6 (ENSSBOG00000032200) #27	TNRC6C (ENSSBOG00000023981) #28	ENSSBOG00000025548 #30	SEC14L1 (ENSSBOG00000019063) #31	MGAT5B (ENSSBOG00000020326) #34	MFSD11 (ENSSBOG00000031294) #35	SRSF2 (ENSSBOG00000030904) ##36	METTL23 (ENSSBOG00000021154)	JMJD6 (ENSSBOG00000031416)	ST6GALNAC1 (ENSSBOG00000024609)	ST6GALNAC2 (ENSSBOG00000022746)	PRCD (ENSSBOG00000029196)
Mas night monkey	MODERN SPECIES	507	RBFOX3 (ENSANAG00000023457)	ENGASE (ENSANAG00000030946) #7	C1QTNF1 (ENSANAG00000032008) #8	CANT1 (ENSANAG00000021964) #9	LGALS3BP (ENSANAG00000034937) #10	TIMP2 (ENSANAG00000028562) #12	USP36 (ENSANAG00000030049) #13	CYTH1 (ENSANAG00000029907) #14	DNAH17 (ENSANAG00000021212) #15	PGS1 (ENSANAG00000029549) #16	SOCS3 (ENSANAG00000009919) #17	ENSANAG00000012662	ENSANAG00000026982	BIRC5 (ENSANAG00000034401) #20	AFMID (ENSANAG00000038418) #21	TK1 (ENSANAG00000022171) #22	SYNGR2 (ENSANAG00000000046) #24	C17orf99 (ENSANAG00000019302) #25	TMC8 (ENSANAG00000020542) #26	TMC6 (ENSANAG00000000318) #27	TNRC6C (ENSANAG00000021554) #28	SEPTIN9 (ENSANAG00000034568) #30	ENSANAG00000024568 #31	MGAT5B (ENSANAG00000037970) #34	MFSD11 (ENSANAG00000007777) #35	SRSF2 (ENSANAG00000004226) ##36	METTL23 (ENSANAG00000021684)	JMJD6 (ENSANAG00000036431)	ST6GALNAC1 (ENSANAG00000019131)	ST6GALNAC2 (ENSANAG00000022772)	PRCD (ENSANAG00000018825)
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00910000148427	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT00940000155386.e.a ##31	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00910000148427	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00510000047537.h #20	ENSGT00910000148427	ENSGT00510000047537.g.a #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867
Vervet Monkey	MODERN SPECIES	7	ENGASE (ENSCSAG00000002356) #7	C1QTNF1 (ENSCSAG00000002357) #8	ENSCSAG00000002358	CANT1 (ENSCSAG00000002360) #9	LGALS3BP (ENSCSAG00000002363) #10	CEP295NL (ENSCSAG00000019045) #11	TIMP2 (ENSCSAG00000002364) #12	USP36 (ENSCSAG00000002367) #13	CYTH1 (ENSCSAG00000002370) #14	DNAH17 (ENSCSAG00000002383) #15	PGS1 (ENSCSAG00000002394) #16	SOCS3 (ENSCSAG00000019044) #17	TMEM235 (ENSCSAG00000002397) #19	ENSCSAG00000002402 #20	AFMID (ENSCSAG00000002407) #21	TK1 (ENSCSAG00000002415) #22	SYNGR2 (ENSCSAG00000002418) #24	C17orf99 (ENSCSAG00000002419) #25	FAM117A (ENSCSAG00000002425)	SLC35B1 (ENSCSAG00000002438)	NXPH3 (ENSCSAG00000002440)	NGFR (ENSCSAG00000002443)	ENSCSAG00000002455	ZNF652 (ENSCSAG00000002462)	PHOSPHO1 (ENSCSAG00000002465)	ABI3 (ENSCSAG00000002473)	GNGT2 (ENSCSAG00000002475)	B4GALNT2 (ENSCSAG00000002479)	IGF2BP1 (ENSCSAG00000002487)	GIP (ENSCSAG00000002491)	SNF8 (ENSCSAG00000002494)
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00510000047537.h #20	ENSGT00910000148427	ENSGT00510000047537.g.a #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867
Cercopithecinae_b	ANCESTRAL SPECIES	19	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537.h #20	ENSGT00910000148427	ENSGT00510000047537.g.a #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Olive baboon	MODERN SPECIES	8	ENGASE (ENSPANG00000019836) #7	C1QTNF1 (ENSPANG00000044352) #8	CANT1 (ENSPANG00000019848) #9	LGALS3BP (ENSPANG00000019852) #10	CEP295NL (ENSPANG00000010714) #11	TIMP2 (ENSPANG00000019851) #12	USP36 (ENSPANG00000019857) #13	CYTH1 (ENSPANG00000019854) #14	DNAH17 (ENSPANG00000019872) #15	PGS1 (ENSPANG00000019870) #16	ENSPANG00000044974 #17	TMEM235 (ENSPANG00000019868) #19	ENSPANG00000048383	BIRC5 (ENSPANG00000019908) #20	AFMID (ENSPANG00000019907) #21	TK1 (ENSPANG00000019913) #22	SYNGR2 (ENSPANG00000019911) #24	ENSPANG00000019936 #25	TMC8 (ENSPANG00000019935) #26	TMC6 (ENSPANG00000019952) #27	TNRC6C (ENSPANG00000019994) #28	SEPTIN9 (ENSPANG00000019992) #30	SEC14L1 (ENSPANG00000019998) #31	MGAT5B (ENSPANG00000019997) #34	ENSPANG00000039680	MFSD11 (ENSPANG00000020024) #35	SRSF2 (ENSPANG00000020023) ##36	METTL23 (ENSPANG00000020022)	JMJD6 (ENSPANG00000020021)	ENSPANG00000020020	ENSPANG00000020018
Cercopithecinae_d	ANCESTRAL SPECIES	15	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537.h #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Drill	MODERN SPECIES	65	RBFOX3 (ENSMLEG00000025686)	ENGASE (ENSMLEG00000003579) #7	C1QTNF1 (ENSMLEG00000040064) #8	CANT1 (ENSMLEG00000036775) #9	LGALS3BP (ENSMLEG00000043642) #10	CEP295NL (ENSMLEG00000042059) #11	TIMP2 (ENSMLEG00000030784) #12	USP36 (ENSMLEG00000043744) #13	CYTH1 (ENSMLEG00000033180) #14	DNAH17 (ENSMLEG00000036182) #15	PGS1 (ENSMLEG00000044322) #16	ENSMLEG00000004111	TMEM235 (ENSMLEG00000029403) #19	ENSMLEG00000034842 #20	AFMID (ENSMLEG00000043922) #21	TK1 (ENSMLEG00000034790) #22	SYNGR2 (ENSMLEG00000030924) #24	C17orf99 (ENSMLEG00000028998) #25	TMC8 (ENSMLEG00000000947) #26	TMC6 (ENSMLEG00000033792) #27	TNRC6C (ENSMLEG00000033436) #28	ENSMLEG00000042122	SEPTIN9 (ENSMLEG00000030788) #30	ENSMLEG00000038276	SEC14L1 (ENSMLEG00000036674) #31	ENSMLEG00000000616	MGAT5B (ENSMLEG00000034420) #34	MFSD11 (ENSMLEG00000035292) #35	SRSF2 (ENSMLEG00000025525) ##36	METTL23 (ENSMLEG00000039778)	JMJD6 (ENSMLEG00000032426)
Sooty mangabey	MODERN SPECIES	519	RBFOX3 (ENSCATG00000018349)	ENGASE (ENSCATG00000034483) #7	C1QTNF1 (ENSCATG00000045170) #8	CANT1 (ENSCATG00000042870) #9	LGALS3BP (ENSCATG00000036068) #10	TIMP2 (ENSCATG00000032703) #12	CEP295NL (ENSCATG00000036831) #11	USP36 (ENSCATG00000043602) #13	CYTH1 (ENSCATG00000038229) #14	DNAH17 (ENSCATG00000038082) #15	PGS1 (ENSCATG00000024852) #16	SOCS3 (ENSCATG00000004903) #17	TMEM235 (ENSCATG00000038750) #19	ENSCATG00000032197 #20	AFMID (ENSCATG00000035396) #21	TK1 (ENSCATG00000035152) #22	ENSCATG00000033698 #24	C17orf99 (ENSCATG00000043490) #25	TMC8 (ENSCATG00000029382) #26	TMC6 (ENSCATG00000034213) #27	TNRC6C (ENSCATG00000033135) #28	SEPTIN9 (ENSCATG00000030099) #30	SEC14L1 (ENSCATG00000044012) #31	ENSCATG00000031508	ENSCATG00000038480	MGAT5B (ENSCATG00000011033) #34	ENSCATG00000005447	SRSF2 (ENSCATG00000033650) ##36	METTL23 (ENSCATG00000013141)	JMJD6 (ENSCATG00000033039)	ENSCATG00000035092
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00510000047537.g.a #20	ENSGT00510000047537.h #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Pig-tailed macaque	MODERN SPECIES	432	ENGASE (ENSMNEG00000025369) #7	C1QTNF1 (ENSMNEG00000031492) #8	CANT1 (ENSMNEG00000004078) #9	LGALS3BP (ENSMNEG00000043985) #10	CEP295NL (ENSMNEG00000015060) #11	TIMP2 (ENSMNEG00000044501) #12	USP36 (ENSMNEG00000035002) #13	CYTH1 (ENSMNEG00000045279) #14	DNAH17 (ENSMNEG00000040035) #15	PGS1 (ENSMNEG00000032685) #16	SOCS3 (ENSMNEG00000006519) #17	ENSMNEG00000028008	TMEM235 (ENSMNEG00000036642) #19	ENSMNEG00000045321 #20	AFMID (ENSMNEG00000029677) #21	TK1 (ENSMNEG00000037124) #22	ENSMNEG00000039620 #24	C17orf99 (ENSMNEG00000039498) #25	TMC8 (ENSMNEG00000037091) #26	TMC6 (ENSMNEG00000037960) #27	TNRC6C (ENSMNEG00000030405) #28	ENSMNEG00000012281	SEPTIN9 (ENSMNEG00000044427) #30	SEC14L1 (ENSMNEG00000037359) #31	ENSMNEG00000042426	MGAT5B (ENSMNEG00000028801) #34	MFSD11 (ENSMNEG00000036673) #35	SRSF2 (ENSMNEG00000031444) ##36	METTL23 (ENSMNEG00000031647)	JMJD6 (ENSMNEG00000040644)	ENSMNEG00000038238
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT01100000263539.b.a.a.a.a.b.a.a.b.d.a.b	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.a.b.b.b	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537.g.a #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386.f #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000159930	ENSGT00940000160433
Crab-eating macaque	MODERN SPECIES	7	TIMP2 (ENSMFAG00000059988) #12	USP36 (ENSMFAG00000003093) #13	CYTH1 (ENSMFAG00000037544) #14	ENSMFAG00000050761	ENSMFAG00000062000	ENSMFAG00000056660	DNAH17 (ENSMFAG00000002118) #15	PGS1 (ENSMFAG00000033111) #16	ENSMFAG00000004354 #17	ENSMFAG00000047575	ENSMFAG00000029831	TMEM235 (ENSMFAG00000052430) #19	ENSMFAG00000040328 #20	ENSMFAG00000047444	AFMID (ENSMFAG00000026977) #21	TK1 (ENSMFAG00000005352) #22	SYNGR2 (ENSMFAG00000037184) #24	C17orf99 (ENSMFAG00000032914) #25	TMC8 (ENSMFAG00000000368) #26	TMC6 (ENSMFAG00000033740) #27	TNRC6C (ENSMFAG00000043943) #28	ENSMFAG00000035508 #30	ENSMFAG00000057180	SEC14L1 (ENSMFAG00000001823) #31	ENSMFAG00000064851	MGAT5B (ENSMFAG00000038105) #34	MFSD11 (ENSMFAG00000034595) #35	SRSF2 (ENSMFAG00000045524) ##36	ENSMFAG00000032203	JMJD6 (ENSMFAG00000039650)	ST6GALNAC1 (ENSMFAG00000041499)
Rhesus	MODERN SPECIES	7	C1QTNF1 (ENSMMUG00000009504) #8	CANT1 (ENSMMUG00000021613) #9	LGALS3BP (ENSMMUG00000019662) #10	TIMP2 (ENSMMUG00000005355) #12	USP36 (ENSMMUG00000005352) #13	CYTH1 (ENSMMUG00000013313) #14	ENSMMUG00000051537	ENSMMUG00000064072	ENSMMUG00000064762	PGS1 (ENSMMUG00000008237) #16	SOCS3 (ENSMMUG00000058428) #17	TMEM235 (ENSMMUG00000049183) #19	BIRC5 (ENSMMUG00000013767) #20	AFMID (ENSMMUG00000002268) #21	ENSMMUG00000058230	TK1 (ENSMMUG00000021867) #22	SYNGR2 (ENSMMUG00000021864) #24	C16H17orf99 (ENSMMUG00000021863) #25	TMC8 (ENSMMUG00000011935) #26	TMC6 (ENSMMUG00000011932) #27	TNRC6C (ENSMMUG00000011924) #28	SEPTIN9 (ENSMMUG00000001321) #30	SEC14L1 (ENSMMUG00000022994) #31	ENSMMUG00000061024	MGAT5B (ENSMMUG00000016300) #34	MFSD11 (ENSMMUG00000022414) #35	SRSF2 (ENSMMUG00000022412) ##36	METTL23 (ENSMMUG00000062104)	JMJD6 (ENSMMUG00000022411)	ST6GALNAC1 (ENSMMUG00000022408)	ST6GALNAC2 (ENSMMUG00000022273)
Rhinopithecus	ANCESTRAL SPECIES	18	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00910000148427	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386.f #31
Golden snub-nosed monkey	MODERN SPECIES	2314	ENSRROG00000044732	RBFOX3 (ENSRROG00000000766)	ENGASE (ENSRROG00000001398) #7	C1QTNF1 (ENSRROG00000038514) #8	CANT1 (ENSRROG00000043360) #9	LGALS3BP (ENSRROG00000035167) #10	CEP295NL (ENSRROG00000002890) #11	TIMP2 (ENSRROG00000028607) #12	USP36 (ENSRROG00000037480) #13	CYTH1 (ENSRROG00000006816) #14	DNAH17 (ENSRROG00000035056) #15	PGS1 (ENSRROG00000014614) #16	SOCS3 (ENSRROG00000024097) #17	TMEM235 (ENSRROG00000042789) #19	AFMID (ENSRROG00000031897) #21	TK1 (ENSRROG00000030829) #22	SYNGR2 (ENSRROG00000042915) #24	C17orf99 (ENSRROG00000029269) #25	TMC8 (ENSRROG00000033685) #26	TMC6 (ENSRROG00000029760) #27	TNRC6C (ENSRROG00000042912) #28	SEPTIN9 (ENSRROG00000041006) #30
Black snub-nosed monkey	MODERN SPECIES	621	RBFOX3 (ENSRBIG00000040449)	ENGASE (ENSRBIG00000036438) #7	C1QTNF1 (ENSRBIG00000002219) #8	CANT1 (ENSRBIG00000033341) #9	LGALS3BP (ENSRBIG00000025122) #10	TIMP2 (ENSRBIG00000031258) #12	CEP295NL (ENSRBIG00000031757) #11	USP36 (ENSRBIG00000018939) #13	CYTH1 (ENSRBIG00000043659) #14	DNAH17 (ENSRBIG00000044463) #15	PGS1 (ENSRBIG00000032209) #16	TMEM235 (ENSRBIG00000031997) #19	ENSRBIG00000029423	BIRC5 (ENSRBIG00000037429) #20	AFMID (ENSRBIG00000035765) #21	TK1 (ENSRBIG00000004804) #22	ENSRBIG00000043138 #24	C17orf99 (ENSRBIG00000036244) #25	TMC8 (ENSRBIG00000030185) #26	TMC6 (ENSRBIG00000035625) #27	TNRC6C (ENSRBIG00000027777) #28	TMEM59L (ENSRBIG00000030377)	CRLF1 (ENSRBIG00000036409)	REX1BD (ENSRBIG00000039070)	UBA52 (ENSRBIG00000028020)	ENSRBIG00000013976	FKBP8 (ENSRBIG00000038838)	ELL (ENSRBIG00000041918)	ISYNA1 (ENSRBIG00000044096)	SSBP4 (ENSRBIG00000022818)	LRRC25 (ENSRBIG00000036814)
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00910000148427	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.q.b #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000165365
Gibbon	MODERN SPECIES	4	ENPP7 (ENSNLEG00000000156)	ENSNLEG00000000153	ENGASE (ENSNLEG00000000148) #7	C1QTNF1 (ENSNLEG00000000146) #8	CANT1 (ENSNLEG00000000141) #9	LGALS3BP (ENSNLEG00000000135) #10	TIMP2 (ENSNLEG00000000129) #12	CEP295NL (ENSNLEG00000000134) #11	USP36 (ENSNLEG00000000107) #13	ENSNLEG00000036300 #14	DNAH17 (ENSNLEG00000034029) #15	PGS1 (ENSNLEG00000034958) #16	TMEM235 (ENSNLEG00000000095) #19	ENSNLEG00000000093 #20	ENSNLEG00000000091 #21	ENSNLEG00000000089 #22	ENSNLEG00000000088 #24	C17orf99 (ENSNLEG00000000084) #25	ENSNLEG00000000086	TMC8 (ENSNLEG00000000072) #26	TMC6 (ENSNLEG00000000058) #27	TNRC6C (ENSNLEG00000000047) #28	ENSNLEG00000000042 #30	SEC14L1 (ENSNLEG00000007634) #31	ENSNLEG00000028045	ENSNLEG00000002569 #34	MFSD11 (ENSNLEG00000002562) #35	SRSF2 (ENSNLEG00000002547) ##36	METTL23 (ENSNLEG00000032876)	ENSNLEG00000002543	ENSNLEG00000002532
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00910000148427	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.q.b #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000165365
Orangutan	MODERN SPECIES	8	ENGASE (ENSPPYG00000008703) #7	C1QTNF1 (ENSPPYG00000039374) #8	CANT1 (ENSPPYG00000039555) #9	LGALS3BP (ENSPPYG00000008960) #10	CEP295NL (ENSPPYG00000036234) #11	TIMP2 (ENSPPYG00000008697) #12	USP36 (ENSPPYG00000008695) #13	CYTH1 (ENSPPYG00000008694) #14	DNAH17 (ENSPPYG00000008692) #15	PGS1 (ENSPPYG00000008691) #16	SOCS3 (ENSPPYG00000008690) #17	TMEM235 (ENSPPYG00000033961) #19	ENSPPYG00000032333	BIRC5 (ENSPPYG00000008687) #20	AFMID (ENSPPYG00000008686) #21	TK1 (ENSPPYG00000008685) #22	SYNGR2 (ENSPPYG00000008684) #24	C17orf99 (ENSPPYG00000008683) #25	TMC8 (ENSPPYG00000008682) #26	TMC6 (ENSPPYG00000008681) #27	TNRC6C (ENSPPYG00000008679) #28	ENSPPYG00000017800	SEPTIN9 (ENSPPYG00000008674) #30	SEC14L1 (ENSPPYG00000008673) #31	MGAT5B (ENSPPYG00000008670) #34	MFSD11 (ENSPPYG00000008669) #35	ENSPPYG00000008668 ##36	ENSPPYG00000029675	JMJD6 (ENSPPYG00000008667)	ENSPPYG00000008666	ST6GALNAC1 (ENSPPYG00000008665)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373.i #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00910000148427	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.q.b #24	ENSGT01050000244808.F #25	ENSGT00390000003738.a.a.b.z	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373.i #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00910000148427	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.q.b #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000165365
Pan	ANCESTRAL SPECIES	3	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373.i #16	ENSGT00940000159620.a #17	ENSGT00910000147324	ENSGT00390000011615.A #19	ENSGT00910000148427	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.r #24	ENSGT00390000003738.a.a.b.z	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00910000148566	ENSGT00940000157598 #28	ENSGT00910000147774	ENSGT00940000157195 #30	ENSGT00940000155386.f #31	ENSGT00910000147103	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008
Chimpanzee	MODERN SPECIES	8	ENGASE (ENSPTRG00000009725) #7	C1QTNF1 (ENSPTRG00000044104) #8	CANT1 (ENSPTRG00000009723) #9	LGALS3BP (ENSPTRG00000009722) #10	CEP295NL (ENSPTRG00000009721) #11	TIMP2 (ENSPTRG00000040748) #12	USP36 (ENSPTRG00000009718) #13	CYTH1 (ENSPTRG00000009717) #14	DNAH17 (ENSPTRG00000044438) #15	PGS1 (ENSPTRG00000009710) #16	SOCS3 (ENSPTRG00000052259) #17	ENSPTRG00000048620	TMEM235 (ENSPTRG00000041290) #19	BIRC5 (ENSPTRG00000009707) #20	AFMID (ENSPTRG00000009705) #21	TK1 (ENSPTRG00000009704) #22	ENSPTRG00000043444 #24	ENSPTRG00000051223	C17H17orf99 (ENSPTRG00000009702) #25	TMC8 (ENSPTRG00000009701) #26	TMC6 (ENSPTRG00000009700) #27	ENSPTRG00000048280	TNRC6C (ENSPTRG00000009699) #28	ENSPTRG00000040016	SEPTIN9 (ENSPTRG00000045094) #30	SEC14L1 (ENSPTRG00000009696) #31	ENSPTRG00000049643	MGAT5B (ENSPTRG00000009695) #34	MFSD11 (ENSPTRG00000009693) #35	SRSF2 (ENSPTRG00000009692) ##36	METTL23 (ENSPTRG00000009691)
Bonobo	MODERN SPECIES	8	C1QTNF1 (ENSPPAG00000027920) #8	CANT1 (ENSPPAG00000029888) #9	LGALS3BP (ENSPPAG00000030778) #10	CEP295NL (ENSPPAG00000020161) #11	TIMP2 (ENSPPAG00000030758) #12	USP36 (ENSPPAG00000029578) #13	CYTH1 (ENSPPAG00000039028) #14	DNAH17 (ENSPPAG00000034220) #15	PGS1 (ENSPPAG00000030088) #16	SOCS3 (ENSPPAG00000015909) #17	ENSPPAG00000037164	ENSPPAG00000008526 #19	ENSPPAG00000015107	BIRC5 (ENSPPAG00000032377) #20	AFMID (ENSPPAG00000027280) #21	TK1 (ENSPPAG00000030854) #22	SYNGR2 (ENSPPAG00000030842) #24	ENSPPAG00000040657	C17orf99 (ENSPPAG00000036772) #25	TMC8 (ENSPPAG00000028026) #26	TMC6 (ENSPPAG00000022146) #27	ENSPPAG00000014831	TNRC6C (ENSPPAG00000027160) #28	ENSPPAG00000043710	SEPTIN9 (ENSPPAG00000034953) #30	SEC14L1 (ENSPPAG00000036599) #31	ENSPPAG00000031317	MGAT5B (ENSPPAG00000043540) #34	MFSD11 (ENSPPAG00000042557) #35	SRSF2 (ENSPPAG00000031433) ##36	METTL23 (ENSPPAG00000028295)
Human	MODERN SPECIES	8	RBFOX3 (ENSG00000167281)	ENGASE (ENSG00000167280) #7	C1QTNF1 (ENSG00000173918) #8	CANT1 (ENSG00000171302) #9	LGALS3BP (ENSG00000108679) #10	CEP295NL (ENSG00000178404) #11	TIMP2 (ENSG00000035862) #12	USP36 (ENSG00000055483) #13	CYTH1 (ENSG00000108669) #14	DNAH17 (ENSG00000187775) #15	PGS1 (ENSG00000087157) #16	SOCS3 (ENSG00000184557) #17	TMEM235 (ENSG00000204278) #19	BIRC5 (ENSG00000089685) #20	AFMID (ENSG00000183077) #21	TK1 (ENSG00000167900) #22	SYNGR2 (ENSG00000108639) #24	C17orf99 (ENSG00000187997) #25	TMC8 (ENSG00000167895) #26	TMC6 (ENSG00000141524) #27	TNRC6C (ENSG00000078687) #28	SEPTIN9 (ENSG00000184640) #30	SEC14L1 (ENSG00000129657) #31	MGAT5B (ENSG00000167889) #34	MFSD11 (ENSG00000092931) #35	SRSF2 (ENSG00000161547) ##36	ENSG00000267168	METTL23 (ENSG00000181038)	JMJD6 (ENSG00000070495)	MXRA7 (ENSG00000182534)	ST6GALNAC1 (ENSG00000070526)
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	210																ENSGGOG00000039135 #22
Gorilla	MODERN SPECIES	18	C1QTNF1 (ENSGGOG00000011197) #8	CANT1 (ENSGGOG00000002440) #9	ENSGGOG00000008323	TIMP2 (ENSGGOG00000037380) #12	CEP295NL (ENSGGOG00000011752) #11	USP36 (ENSGGOG00000015626) #13	CYTH1 (ENSGGOG00000010087) #14	DNAH17 (ENSGGOG00000003609) #15	PGS1 (ENSGGOG00000003602) #16	ENSGGOG00000023276 #16	SOCS3 (ENSGGOG00000036429) #17	ENSGGOG00000043571	TMEM235 (ENSGGOG00000007039) #19	BIRC5 (ENSGGOG00000037263) #20	AFMID (ENSGGOG00000007031) #21	ENSGGOG00000007026 #22	C17orf99 (ENSGGOG00000007017) #25	ENSGGOG00000036829	TMC8 (ENSGGOG00000007010) #26	TMC6 (ENSGGOG00000006995) #27	TNRC6C (ENSGGOG00000011304) #28	ENSGGOG00000044091	SEPTIN9 (ENSGGOG00000012780) #30	ENSGGOG00000044074 ##31	ENSGGOG00000040413	MGAT5B (ENSGGOG00000012806) #34	MFSD11 (ENSGGOG00000014390) #35	SRSF2 (ENSGGOG00000014378) ##36	METTL23 (ENSGGOG00000014371)	JMJD6 (ENSGGOG00000014361)	ENSGGOG00000014352
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00950000183754	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00950000183754	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Panthera	ANCESTRAL SPECIES	22	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00950000183754	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
Panthera_a	ANCESTRAL SPECIES	25	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00950000182983.A.a.b	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00950000183754	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
lion	MODERN SPECIES	14	CBX2 (ENSPLOG00000022505)	ENPP7 (ENSPLOG00000022508)	RBFOX3 (ENSPLOG00000022521)	ENGASE (ENSPLOG00000022538) #7	C1QTNF1 (ENSPLOG00000022548) #8	ENSPLOG00000022555 #9	TIMP2 (ENSPLOG00000022558) #12	USP36 (ENSPLOG00000022561) #13	CYTH1 (ENSPLOG00000005483) #14	DNAH17 (ENSPLOG00000005623) #15	PGS1 (ENSPLOG00000005964) #16	SOCS3 (ENSPLOG00000005993) #17	ENSPLOG00000006022 #18	BIRC5 (ENSPLOG00000006125) #20	AFMID (ENSPLOG00000006240) #21	TK1 (ENSPLOG00000006331) #22	SYNGR2 (ENSPLOG00000006379) #24	TMC8 (ENSPLOG00000006426) #26	TMC6 (ENSPLOG00000006469) #27	TNRC6C (ENSPLOG00000006508) #28	SEPTIN9 (ENSPLOG00000006644) #30	SEC14L1 (ENSPLOG00000006825) #31	MGAT5B (ENSPLOG00000006996) #34	MFSD11 (ENSPLOG00000007117) #35	ENSPLOG00000007231 #36	ENSPLOG00000007250	JMJD6 (ENSPLOG00000007293)	ENSPLOG00000007343	ST6GALNAC1 (ENSPLOG00000007369)	ST6GALNAC2 (ENSPLOG00000007452)	PRCD (ENSPLOG00000007497)
leopard	MODERN SPECIES	48	ENSPPRG00000004935 #8	ENSPPRG00000002027 #8	CANT1 (ENSPPRG00000001782) #9	ENSPPRG00000001243	TIMP2 (ENSPPRG00000000961) #12	ENSPPRG00000023095 #13	CYTH1 (ENSPPRG00000021545) #14	DNAH17 (ENSPPRG00000013588) #15	PGS1 (ENSPPRG00000006291) #16	SOCS3 (ENSPPRG00000006175) #17	ENSPPRG00000006012 #18	TMEM235 (ENSPPRG00000005653) #19	BIRC5 (ENSPPRG00000004811) #20	AFMID (ENSPPRG00000003616) #21	ENSPPRG00000003085	TK1 (ENSPPRG00000002653) #22	SYNGR2 (ENSPPRG00000001435) #24	TMC8 (ENSPPRG00000000331) #26	ENSPPRG00000020740 #27	TNRC6C (ENSPPRG00000018881) #28	SEPTIN9 (ENSPPRG00000009973) #30	SEC14L1 (ENSPPRG00000008472) #31	MGAT5B (ENSPPRG00000001590) #34	MFSD11 (ENSPPRG00000000368) #35	METTL23 (ENSPPRG00000017870)	JMJD6 (ENSPPRG00000013664)	ENSPPRG00000011973	ST6GALNAC1 (ENSPPRG00000011324)	ST6GALNAC2 (ENSPPRG00000009383)	PRCD (ENSPPRG00000009112)	CYGB (ENSPPRG00000008541)
Tiger	MODERN SPECIES	357	CBX8 (ENSPTIG00000009412)	CBX2 (ENSPTIG00000009403)	ENPP7 (ENSPTIG00000009339)	ENGASE (ENSPTIG00000009321) #7	C1QTNF1 (ENSPTIG00000009311) #8	CANT1 (ENSPTIG00000009295) #9	LGALS3BP (ENSPTIG00000009285) #10	TIMP2 (ENSPTIG00000009271) #12	ENSPTIG00000009252 #13	CYTH1 (ENSPTIG00000009182) #14	DNAH17 (ENSPTIG00000009029) #15	PGS1 (ENSPTIG00000008983) #16	ENSPTIG00000008951 #18	ENSPTIG00000008938 #20	ENSPTIG00000008910	TK1 (ENSPTIG00000008894) #22	SYNGR2 (ENSPTIG00000008879) #24	TMC8 (ENSPTIG00000008854) #26	TNRC6C (ENSPTIG00000008791) #28	ENSPTIG00000008777 #30
Cat	MODERN SPECIES	245	CBX2 (ENSFCAG00000045850)	ENPP7 (ENSFCAG00000026307)	RBFOX3 (ENSFCAG00000002555)	ENGASE (ENSFCAG00000002554) #7	C1QTNF1 (ENSFCAG00000002553) #8	ENSFCAG00000025404 #9	TIMP2 (ENSFCAG00000046765) #12	USP36 (ENSFCAG00000024800) #13	CYTH1 (ENSFCAG00000008608) #14	ENSFCAG00000048509 #15	PGS1 (ENSFCAG00000002345) #16	SOCS3 (ENSFCAG00000027677) #17	THA1 (ENSFCAG00000024226) #18	BIRC5 (ENSFCAG00000039377) #20	AFMID (ENSFCAG00000030555) #21	TK1 (ENSFCAG00000013007) #22	SYNGR2 (ENSFCAG00000031160) #24	TMC8 (ENSFCAG00000015124) #26	ENSFCAG00000050973	ENSFCAG00000028352 #27	TNRC6C (ENSFCAG00000028358) #28	SEPTIN9 (ENSFCAG00000009399) #30	SEC14L1 (ENSFCAG00000031926) #31	MGAT5B (ENSFCAG00000004239) #34	MFSD11 (ENSFCAG00000004238) #35	ENSFCAG00000043466 #36	METTL23 (ENSFCAG00000004237)	JMJD6 (ENSFCAG00000036909)	ST6GALNAC1 (ENSFCAG00000004234)	ST6GALNAC2 (ENSFCAG00000012068)	PRCD (ENSFCAG00000046670)
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00950000183754	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930
Canidae	ANCESTRAL SPECIES	28	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
Canis_lupus	ANCESTRAL SPECIES	34	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
Dog	MODERN SPECIES	37	CBX8 (ENSCAFG00845013937)	CBX2 (ENSCAFG00845013965)	ENPP7 (ENSCAFG00845014006)	RBFOX3 (ENSCAFG00845014109)	ENGASE (ENSCAFG00845014201) #7	C1QTNF1 (ENSCAFG00845014232) #8	CANT1 (ENSCAFG00845014287) #9	USP36 (ENSCAFG00845014348) #13	CYTH1 (ENSCAFG00845014403) #14	DNAH17 (ENSCAFG00845014476) #15	PGS1 (ENSCAFG00845014578) #16	SOCS3 (ENSCAFG00845014621) #17	THA1 (ENSCAFG00845014635) #18	TMEM235 (ENSCAFG00845014659) #19	BIRC5 (ENSCAFG00845014719) #21	TK1 (ENSCAFG00845014848) #22	SYNGR2 (ENSCAFG00845014880) #24	C17orf99 (ENSCAFG00845014912) #25	TMC8 (ENSCAFG00845014942) #26	TMC6 (ENSCAFG00845015089) #27	TNRC6C (ENSCAFG00845015344) #28	SEPTIN9 (ENSCAFG00845015543) #30	SEC14L1 (ENSCAFG00845015759) #31	MGAT5B (ENSCAFG00845015937) #34	MFSD11 (ENSCAFG00845016337) #35	ENSCAFG00845016418 #36	METTL23 (ENSCAFG00845016485)	JMJD6 (ENSCAFG00845016622)	ENSCAFG00845016694	ST6GALNAC1 (ENSCAFG00845016785)	ST6GALNAC2 (ENSCAFG00845016971)
Dingo	MODERN SPECIES	68	ENGASE (ENSCAFG00020008101) #7	C1QTNF1 (ENSCAFG00020008100) #8	CANT1 (ENSCAFG00020008098) #9	LGALS3BP (ENSCAFG00020008096) #10	ENSCAFG00020008092 #11	TIMP2 (ENSCAFG00020008074) #12	USP36 (ENSCAFG00020008065) #13	CYTH1 (ENSCAFG00020008053) #14	DNAH17 (ENSCAFG00020007077) #15	PGS1 (ENSCAFG00020006979) #16	SOCS3 (ENSCAFG00020006975) #17	ENSCAFG00020006972 #18	TMEM235 (ENSCAFG00020006970) #19	BIRC5 (ENSCAFG00020006968) #20	AFMID (ENSCAFG00020006935) #21	TK1 (ENSCAFG00020006905) #22	SYNGR2 (ENSCAFG00020006897) #24	TMC8 (ENSCAFG00020006887) #26	TMC6 (ENSCAFG00020006872) #27	TNRC6C (ENSCAFG00020006661) #28	SEPTIN9 (ENSCAFG00020006642) #30	SEC14L1 (ENSCAFG00020006343) #31	MGAT5B (ENSCAFG00020006283) #34	MFSD11 (ENSCAFG00020006274) #35	ENSCAFG00020006267 #36	ENSCAFG00020006262	JMJD6 (ENSCAFG00020006250)	ST6GALNAC1 (ENSCAFG00020006223)	ST6GALNAC2 (ENSCAFG00020006213)	PRCD (ENSCAFG00020006203)	CYGB (ENSCAFG00020006201)
Red fox	MODERN SPECIES	31	CBX2 (ENSVVUG00000017904)	ENPP7 (ENSVVUG00000017886)	RBFOX3 (ENSVVUG00000017864)	ENGASE (ENSVVUG00000017855) #7	C1QTNF1 (ENSVVUG00000017851) #8	ENSVVUG00000017847 #9	TIMP2 (ENSVVUG00000017839) #12	USP36 (ENSVVUG00000017818) #13	CYTH1 (ENSVVUG00000017801) #14	DNAH17 (ENSVVUG00000015494) #15	PGS1 (ENSVVUG00000015329) #16	SOCS3 (ENSVVUG00000015326) #17	ENSVVUG00000015320 #18	TMEM235 (ENSVVUG00000015319) #19	AFMID (ENSVVUG00000015315) #21	TK1 (ENSVVUG00000015313) #22	SYNGR2 (ENSVVUG00000015312) #24	ENSVVUG00000015309 #25	TMC8 (ENSVVUG00000015300) #26	TMC6 (ENSVVUG00000015279) #27	TNRC6C (ENSVVUG00000015268) #28	SEPT9 (ENSVVUG00000015245) #30	SEC14L1 (ENSVVUG00000015234) #31	MGAT5B (ENSVVUG00000015215) #34	ENSVVUG00000015213 #34	MFSD11 (ENSVVUG00000015202) #35	ENSVVUG00000015200	ENSVVUG00000015199	JMJD6 (ENSVVUG00000015183)	ST6GALNAC1 (ENSVVUG00000015172)	ST6GALNAC2 (ENSVVUG00000015168)
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00950000183754	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930
Ursidae	ANCESTRAL SPECIES	19	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348.b #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00950000183754	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930
Ursus	ANCESTRAL SPECIES	2	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348.b #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00950000183754	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT01050000246282	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930
American black bear	MODERN SPECIES	1202												ENSUAMG00000021195 #18	BIRC5 (ENSUAMG00000021196) #20	AFMID (ENSUAMG00000021197) #21	ENSUAMG00000021198	TK1 (ENSUAMG00000021199) #22	SYNGR2 (ENSUAMG00000021200) #24	C17orf99 (ENSUAMG00000021201) #25	TMC8 (ENSUAMG00000021203) #26	TMC6 (ENSUAMG00000021204) #27	ENSUAMG00000021223 #28
Polar bear	MODERN SPECIES	185	ENGASE (ENSUMAG00000014259) #7	C1QTNF1 (ENSUMAG00000014250) #8	CANT1 (ENSUMAG00000014242) #9	LGALS3BP (ENSUMAG00000014240) #10	ENSUMAG00000014235 #11	TIMP2 (ENSUMAG00000014234) #12	USP36 (ENSUMAG00000014158) #13	CYTH1 (ENSUMAG00000014148) #14	DNAH17 (ENSUMAG00000013798) #15	PGS1 (ENSUMAG00000013761) #16	ENSUMAG00000013756	ENSUMAG00000013751 #18	BIRC5 (ENSUMAG00000013742) #20	AFMID (ENSUMAG00000013725) #21	SYNGR2 (ENSUMAG00000013720) #24	TK1 (ENSUMAG00000013715) #22	C17orf99 (ENSUMAG00000013712) #25	TMC8 (ENSUMAG00000013700) #26	TNRC6C (ENSUMAG00000013614) #28	ENSUMAG00000013597 #30	ENSUMAG00000013595	SEC14L1 (ENSUMAG00000013590) #31	MGAT5B (ENSUMAG00000013579) #34	MFSD11 (ENSUMAG00000013573) #35	METTL23 (ENSUMAG00000013570)	JMJD6 (ENSUMAG00000013565)	ENSUMAG00000013558	ST6GALNAC1 (ENSUMAG00000013541)	ST6GALNAC2 (ENSUMAG00000013536)	ENSUMAG00000013508	UBE2O (ENSUMAG00000013395)
Giant Panda	MODERN SPECIES	4	RBFOX3 (ENSAMEG00000014170)	ENGASE (ENSAMEG00000014155) #7	C1QTNF1 (ENSAMEG00000014152) #8	LGALS3BP (ENSAMEG00000014141) #10	ENSAMEG00000014130 #11	TIMP2 (ENSAMEG00000014114) #12	USP36 (ENSAMEG00000014103) #13	CYTH1 (ENSAMEG00000014059) #14	DNAH17 (ENSAMEG00000013903) #15	PGS1 (ENSAMEG00000013879) #16	SOCS3 (ENSAMEG00000019175) #17	ENSAMEG00000013872 #18	TMEM235 (ENSAMEG00000013870) #19	BIRC5 (ENSAMEG00000013864) #20	AFMID (ENSAMEG00000013854) #21	TK1 (ENSAMEG00000013839) #22	SYNGR2 (ENSAMEG00000013831) #24	C17orf99 (ENSAMEG00000013830) #25	TMC8 (ENSAMEG00000013800) #26	TMC6 (ENSAMEG00000013773) #27	TNRC6C (ENSAMEG00000013756) #28	SEPTIN9 (ENSAMEG00000013722) #30	SEC14L1 (ENSAMEG00000013683) #31	MGAT5B (ENSAMEG00000013660) #34	MFSD11 (ENSAMEG00000013630) #35	ENSAMEG00000013624 #36	ENSAMEG00000027394	JMJD6 (ENSAMEG00000013599)	ENSAMEG00000026363	ST6GALNAC1 (ENSAMEG00000010401)	ENSAMEG00000026660
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
Ferret	MODERN SPECIES	186	CANT1 (ENSMPUG00000012456) #9	LGALS3BP (ENSMPUG00000012468) #10	ENSMPUG00000019909	ENSMPUG00000019910 #11	TIMP2 (ENSMPUG00000012488) #12	USP36 (ENSMPUG00000012516) #13	CYTH1 (ENSMPUG00000012569) #14	DNAH17 (ENSMPUG00000012574) #15	ENSMPUG00000019913	PGS1 (ENSMPUG00000013187) #16	SOCS3 (ENSMPUG00000019914) #17	ENSMPUG00000013230 #18	TMEM235 (ENSMPUG00000013240) #19	BIRC5 (ENSMPUG00000013248) #20	AFMID (ENSMPUG00000013251) #21	TK1 (ENSMPUG00000013258) #22	SYNGR2 (ENSMPUG00000013312) #24	C17orf99 (ENSMPUG00000013324) #25	TMC8 (ENSMPUG00000013330) #26	ENSMPUG00000019915	TMC6 (ENSMPUG00000013339) #27	TNRC6C (ENSMPUG00000013348) #28	ENSMPUG00000013357	ENSMPUG00000013359	ENSMPUG00000013366	ENSMPUG00000013369	SEPTIN9 (ENSMPUG00000013372) #30	ENSMPUG00000013380	SEC14L1 (ENSMPUG00000013385) #31	MGAT5B (ENSMPUG00000013394) #34	MFSD11 (ENSMPUG00000013399) #35
American mink	MODERN SPECIES	27	C1QTNF1 (ENSNVIG00000014259) #8	CANT1 (ENSNVIG00000014252) #9	LGALS3BP (ENSNVIG00000014237) #10	ENSNVIG00000014232 #11	TIMP2 (ENSNVIG00000014219) #12	ENSNVIG00000014213 #13	ENSNVIG00000014202 #13	CYTH1 (ENSNVIG00000014104) #14	DNAH17 (ENSNVIG00000013924) #15	PGS1 (ENSNVIG00000013912) #16	SOCS3 (ENSNVIG00000013909) #17	ENSNVIG00000013890 #18	TMEM235 (ENSNVIG00000013876) #19	BIRC5 (ENSNVIG00000013860) #20	ENSNVIG00000013845	ENSNVIG00000013839 #22	SYNGR2 (ENSNVIG00000013828) #24	ENSNVIG00000013823 #25	TMC8 (ENSNVIG00000013797) #26	ENSNVIG00000013760 #27	TNRC6C (ENSNVIG00000013618) #28	SEPTIN9 (ENSNVIG00000013569) #30	SEC14L1 (ENSNVIG00000013472) #31	ENSNVIG00000013464	MGAT5B (ENSNVIG00000013257) #34	MFS11 (ENSNVIG00000013122) #35	ENSNVIG00000013109 #36	METTL23 (ENSNVIG00000013092)	JMJD6 (ENSNVIG00000013060)	ENSNVIG00000013049	ST6GALNAC1 (ENSNVIG00000013010)
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433.b
Equus	ANCESTRAL SPECIES		ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT01090000260973	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433.b	ENSGT00860000135966
Donkey	MODERN SPECIES	4	C1QTNF1 (ENSEASG00005037293) #8	CANT1 (ENSEASG00005005045) #9	LGALS3BP (ENSEASG00005032807) #10	ENSEASG00005005041	ENSEASG00005005037 #11	TIMP2 (ENSEASG00005035947) #12	USP36 (ENSEASG00005005026) #13	CYTH1 (ENSEASG00005005018) #14	DNAH17 (ENSEASG00005004928) #15	PGS1 (ENSEASG00005004879) #16	SOCS3 (ENSEASG00005027575) #17	ENSEASG00005004870 #18	TMEM235 (ENSEASG00005004868) #19	BIRC5 (ENSEASG00005034805) #20	AFMID (ENSEASG00005004858) #21	TK1 (ENSEASG00005004851) #22	SYNGR2 (ENSEASG00005025302) #24	ENSEASG00005004842 #25	TMC8 (ENSEASG00005004829) #26	TMC6 (ENSEASG00005004809) #27	TNRC6C (ENSEASG00005004799) #28	SEPTIN9 (ENSEASG00005004791) #30	SEC14L1 (ENSEASG00005004385) #31	ENSEASG00005036611	MGAT5B (ENSEASG00005004333) #34	MFSD11 (ENSEASG00005004327) #35	JMJD6 (ENSEASG00005004303)	ENSEASG00005033434	ENSEASG00005023836	ENSEASG00005004294	ENSEASG00005028091
Horse	MODERN SPECIES	2	C1QTNF1 (ENSECAG00000023397) #8	CANT1 (ENSECAG00000023633) #9	LGALS3BP (ENSECAG00000033385) #10	ENSECAG00000036395	TIMP2 (ENSECAG00000060149) #12	TIMP2 (ENSECAG00000011834) #11	USP36 (ENSECAG00000016116) #13	CYTH1 (ENSECAG00000024699) #14	DNAH17 (ENSECAG00000002831) #15	PGS1 (ENSECAG00000020213) #16	SOCS3 (ENSECAG00000001249) #17	THA1 (ENSECAG00000007112) #18	TMEM235 (ENSECAG00000031519) #19	BIRC5 (ENSECAG00000008466) #20	AFMID (ENSECAG00000012095) #21	TK1 (ENSECAG00000016173) #22	SYNGR2 (ENSECAG00000021946) #24	C11H17orf99 (ENSECAG00000008388) #25	TMC8 (ENSECAG00000010090) #26	TMC6 (ENSECAG00000020115) #27	TNRC6C (ENSECAG00000012486) #28	SEPTIN9 (ENSECAG00000020246) #30	SEC14L1 (ENSECAG00000014473) #31	MGAT5B (ENSECAG00000024072) #34	MFSD11 (ENSECAG00000011098) #35	ENSECAG00000056457	JMJD6 (ENSECAG00000021167)	ENSECAG00000044967	ENSECAG00000049283	ST6GALNAC1 (ENSECAG00000010215)	ST6GALNAC2 (ENSECAG00000016019)
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000159930	ENSGT00940000160433.b	ENSGT00520000058096
Megabat	MODERN SPECIES	3332													ENSPVAG00000002024 #19	BIRC5 (ENSPVAG00000002023) #20	AFMID (ENSPVAG00000002020) #21	TK1 (ENSPVAG00000002019) #22	SYNGR2 (ENSPVAG00000002017) #24	ENSPVAG00000002015 #25	TMC8 (ENSPVAG00000002011) #26	TMC6 (ENSPVAG00000002009) #27	TNRC6C (ENSPVAG00000002008) #28
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000159930	ENSGT00940000160433.b	ENSGT00520000058096
Microbat	MODERN SPECIES	2368														BIRC5 (ENSMLUG00000006281) #20	AFMID (ENSMLUG00000027116) #21	TK1 (ENSMLUG00000023352) #22
Greater horseshoe bat	MODERN SPECIES	13	ENPP7 (ENSRFEG00010019595)	RBFOX3 (ENSRFEG00010019521)	ENGASE (ENSRFEG00010019490) #7	C1QTNF1 (ENSRFEG00010019462) #8	ENSRFEG00010019416 #9	CEP295NL (ENSRFEG00010019375) #11	TIMP2 (ENSRFEG00010019315) #12	USP36 (ENSRFEG00010019262) #13	CYTH1 (ENSRFEG00010019226) #14	DNAH17 (ENSRFEG00010017923) #15	PGS1 (ENSRFEG00010017843) #16	SOCS3 (ENSRFEG00010017827) #17	TMEM235 (ENSRFEG00010017654) #19	BIRC5 (ENSRFEG00010017591) #20	AFMID (ENSRFEG00010017477) #21	TK1 (ENSRFEG00010017194) #22	SYNGR2 (ENSRFEG00010017058) #24	C17orf99 (ENSRFEG00010017034) #25	TMC8 (ENSRFEG00010016970) #26	TMC6 (ENSRFEG00010016877) #27	TNRC6C (ENSRFEG00010016351) #28	SEPTIN9 (ENSRFEG00010016110) #30	ENSRFEG00010016042	SEC14L1 (ENSRFEG00010015885) #31	MGAT5B (ENSRFEG00010015760) #34	MFSD11 (ENSRFEG00010015654) #35	SRSF2 (ENSRFEG00010015598) ##36	ENSRFEG00010015470	JMJD6 (ENSRFEG00010015224)	ENSRFEG00010015169	ST6GALNAC1 (ENSRFEG00010015107)
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Suina	ANCESTRAL SPECIES		ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.u.b #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT00980000202557	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Pig	MODERN SPECIES	3	RBFOX3 (ENSSSCG00000039498)	ENGASE (ENSSSCG00000032411) #7	C1QTNF1 (ENSSSCG00000035511) #8	CANT1 (ENSSSCG00000038130) #9	LGALS3BP (ENSSSCG00000036383) #10	ENSSSCG00000017164 #12	USP36 (ENSSSCG00000017165) #13	CYTH1 (ENSSSCG00000017167) #14	DNAH17 (ENSSSCG00000036056) #15	PGS1 (ENSSSCG00000036308) #16	SOCS3 (ENSSSCG00000036956) #17	ENSSSCG00000033883 #18	ENSSSCG00000035360 #19	BIRC5 (ENSSSCG00000040486) #20	AFMID (ENSSSCG00000033636) #21	TK1 (ENSSSCG00000037120) #22	SYNGR2 (ENSSSCG00000031600) #24	ENSSSCG00000041583	TMC8 (ENSSSCG00000033592) #26	TMC6 (ENSSSCG00000032562) #27	TNRC6C (ENSSSCG00000034373) #28	SEPTIN9 (ENSSSCG00000017168) #30	SEC14L1 (ENSSSCG00000017169) #31	ENSSSCG00000048201	MGAT5B (ENSSSCG00000017170) #34	MFSD11 (ENSSSCG00000029343) #35	SRSF2 (ENSSSCG00000036592) ##36	METTL23 (ENSSSCG00000023139)	JMJD6 (ENSSSCG00000035923)	ENSSSCG00000037376	ST6GALNAC1 (ENSSSCG00000017172)
Chacoan peccary	MODERN SPECIES	821	C1QTNF1 (ENSCWAG00000015857) #8	CANT1 (ENSCWAG00000015866) #9	LGALS3BP (ENSCWAG00000015890) #10	ENSCWAG00000015905	TIMP2 (ENSCWAG00000015979) #12	USP36 (ENSCWAG00000016028) #13	CYTH1 (ENSCWAG00000016162) #14	DNAH17 (ENSCWAG00000016265) #15	ENSCWAG00000017229	PGS1 (ENSCWAG00000017266) #16	SOCS3 (ENSCWAG00000017313) #17	ENSCWAG00000017326 #18	BIRC5 (ENSCWAG00000017410) #20	AFMID (ENSCWAG00000017461) #21	ENSCWAG00000017633	TK1 (ENSCWAG00000017667) #22	SYNGR2 (ENSCWAG00000017701) #24	TMC8 (ENSCWAG00000017745) #26	ENSCWAG00000017885
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000153123.A.f #11	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.u.b #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000153123.A.f #11	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.u.b #20	ENSGT00950000183754	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00490000044510	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.u.b #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000012981.rb.b	ENSGT00390000014681 #18	ENSGT00510000047537.u.b #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000012981.rb.b	ENSGT00390000014681 #18	ENSGT00510000047537.u.b #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930
Narwhal	MODERN SPECIES	316	ENPP7 (ENSMMNG00015021922)	RBFOX3 (ENSMMNG00015021926)	ENGASE (ENSMMNG00015021931) #7	ENSMMNG00015021937 #8	CANT1 (ENSMMNG00015015971) #9	LGALS3BP (ENSMMNG00015016012) #10	ENSMMNG00015016068 #13	CYTH1 (ENSMMNG00015016146) #14	DNAH17 (ENSMMNG00015016492) #15	PGS1 (ENSMMNG00015017056) #16	SOCS3 (ENSMMNG00015017100) #17	ENSMMNG00015017129	ENSMMNG00015017149 #18	ENSMMNG00015017320 #20	ENSMMNG00015017358	TK1 (ENSMMNG00015017385) #22	SYNGR2 (ENSMMNG00015017483) #24	TMC8 (ENSMMNG00015017527) #26	TMC6 (ENSMMNG00015017666) #27	TNRC6C (ENSMMNG00015017981) #28	SEPTIN9 (ENSMMNG00015018284) #30	SEC14L1 (ENSMMNG00015018387) #31	ENSMMNG00015018443	MGAT5B (ENSMMNG00015018487) #34	MFSD11 (ENSMMNG00015018652) #35	SRSF2 (ENSMMNG00015018708) ##36	METTL23 (ENSMMNG00015018738)	JMJD6 (ENSMMNG00015018795)	ENSMMNG00015018849	ST6GALNAC2 (ENSMMNG00015018869)	PRCD (ENSMMNG00015018911)
Beluga whale	MODERN SPECIES	26	RBFOX3 (ENSDLEG00000006115)	ENGASE (ENSDLEG00000006126) #7	C1QTNF1 (ENSDLEG00000006143) #8	CANT1 (ENSDLEG00000006148) #9	LGALS3BP (ENSDLEG00000006155) #10	TIMP2 (ENSDLEG00000006162) #12	USP36 (ENSDLEG00000006165) #13	CYTH1 (ENSDLEG00000006172) #14	DNAH17 (ENSDLEG00000006409) #15	PGS1 (ENSDLEG00000010235) #16	SOCS3 (ENSDLEG00000010269) #17	ENSDLEG00000010277	ENSDLEG00000010287 #18	BIRC5 (ENSDLEG00000010337) #20	AFMID (ENSDLEG00000010359) #21	TK1 (ENSDLEG00000010425) #22	SYNGR2 (ENSDLEG00000010434) #24	ENSDLEG00000010438 #25	TMC8 (ENSDLEG00000010468) #26	TMC6 (ENSDLEG00000010712) #27	TNRC6C (ENSDLEG00000010797) #28	SEPT9 (ENSDLEG00000010910) #30	SEC14L1 (ENSDLEG00000010989) #31	ENSDLEG00000011022	MGAT5B (ENSDLEG00000011043) #34	MFSD11 (ENSDLEG00000011080) #35	SRSF2 (ENSDLEG00000011122)	METTL23 (ENSDLEG00000004731)	JMJD6 (ENSDLEG00000004738)	ENSDLEG00000004743	ENSDLEG00000004748
Vaquita	MODERN SPECIES	12	RBFOX3 (ENSPSNG00000020955)	ENGASE (ENSPSNG00000021222) #7	C1QTNF1 (ENSPSNG00000021246) #8	CANT1 (ENSPSNG00000021280) #9	LGALS3BP (ENSPSNG00000021298) #10	TIMP2 (ENSPSNG00000021332) #12	USP36 (ENSPSNG00000021370) #13	CYTH1 (ENSPSNG00000021432) #14	DNAH17 (ENSPSNG00000021504) #15	PGS1 (ENSPSNG00000021574) #16	SOCS3 (ENSPSNG00000021588) #17	ENSPSNG00000021597	ENSPSNG00000021607 #18	ENSPSNG00000021651 #20	AFMID (ENSPSNG00000021690) #21	TK1 (ENSPSNG00000021729) #22	SYNGR2 (ENSPSNG00000021754) #24	TMC8 (ENSPSNG00000021800) #26	TMC6 (ENSPSNG00000021896) #27	TNRC6C (ENSPSNG00000022015) #28	SEPTIN9 (ENSPSNG00000022115) #30	SEC14L1 (ENSPSNG00000022148) #31	ENSPSNG00000022163	MGAT5B (ENSPSNG00000022182) #34	MFSD11 (ENSPSNG00000022224) #35	SRSF2 (ENSPSNG00000022238) ##36	METTL23 (ENSPSNG00000022242)	JMJD6 (ENSPSNG00000022248)	MXRA7 (ENSPSNG00000022256)	ST6GALNAC2 (ENSPSNG00000022261)	PRCD (ENSPSNG00000022269)
Dolphin	MODERN SPECIES	2434													ENSTTRG00000010850 #19	BIRC5 (ENSTTRG00000010849) #20	AFMID (ENSTTRG00000010847) #21	TK1 (ENSTTRG00000010846) #22	SYNGR2 (ENSTTRG00000010844) #24	ENSTTRG00000010842	TMC8 (ENSTTRG00000010840) #26	TMC6 (ENSTTRG00000010831) #27	TNRC6C (ENSTTRG00000010828) #28
Sperm whale	MODERN SPECIES	1074															AFMID (ENSPCTG00005019796) #21	TK1 (ENSPCTG00005019940) #22
Blue whale	MODERN SPECIES	12	ENPP7 (ENSBMSG00010021204)	RBFOX3 (ENSBMSG00010021110)	ENGASE (ENSBMSG00010021069) #7	C1QTNF1 (ENSBMSG00010021047) #8	ENSBMSG00010021015 #9	TIMP2 (ENSBMSG00010020992) #12	ENSBMSG00010020967 #13	CYTH1 (ENSBMSG00010020918) #14	DNAH17 (ENSBMSG00010020755) #15	PGS1 (ENSBMSG00010020700) #16	SOCS3 (ENSBMSG00010020686) #17	ENSBMSG00010020663 #18	ENSBMSG00010020645 #19	BIRC5 (ENSBMSG00010020627) #20	AFMID (ENSBMSG00010020598) #21	TK1 (ENSBMSG00010020558) #22	SYNGR2 (ENSBMSG00010020531) #24	ENSBMSG00010020517 #25	TMC8 (ENSBMSG00010020474) #26	TMC6 (ENSBMSG00010020233) #27	TNRC6C (ENSBMSG00010019982) #28	SEPTIN9 (ENSBMSG00010019852) #30	SEC14L1 (ENSBMSG00010019765) #31	ENSBMSG00010019730	MGAT5B (ENSBMSG00010019489) #34	MFSD11 (ENSBMSG00010019370) #35	SRSF2 (ENSBMSG00010019332) ##36	METTL23 (ENSBMSG00010019305)	JMJD6 (ENSBMSG00010019241)	ENSBMSG00010019009	ST6GALNAC1 (ENSBMSG00010018932)
Pecora	ANCESTRAL SPECIES	1	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Percora_a	ANCESTRAL SPECIES	2	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Bovidae	ANCESTRAL SPECIES	2	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Caprinae	ANCESTRAL SPECIES	1	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000153123.A.f #11	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Goat	MODERN SPECIES	10	ENGASE (ENSCHIG00000018465) #7	C1QTNF1 (ENSCHIG00000026763) #8	CANT1 (ENSCHIG00000017019) #9	LGALS3BP (ENSCHIG00000021286) #10	TIMP2 (ENSCHIG00000024986) #12	ENSCHIG00000011109 #11	USP36 (ENSCHIG00000022760) #13	CYTH1 (ENSCHIG00000018152) #14	DNAH17 (ENSCHIG00000026163) #15	PGS1 (ENSCHIG00000025453) #16	SOCS3 (ENSCHIG00000011290) #17	ENSCHIG00000026867 #18	TMEM235 (ENSCHIG00000020609) #19	ENSCHIG00000013296 #20	AFMID (ENSCHIG00000026706) #21	TK1 (ENSCHIG00000016895) #22	SYNGR2 (ENSCHIG00000008367) #24	TMC8 (ENSCHIG00000023556) #26	TMC6 (ENSCHIG00000015724) #27	TNRC6C (ENSCHIG00000026004) #28	SEPTIN9 (ENSCHIG00000026942) #30	ENSCHIG00000014296	SEC14L1 (ENSCHIG00000017729) #31	MGAT5B (ENSCHIG00000017785) #34	MFSD11 (ENSCHIG00000025495) #35	ENSCHIG00000010641	SRSF2 (ENSCHIG00000017001) ##36	METTL23 (ENSCHIG00000003411)	ENSCHIG00000022054	ENSCHIG00000009258	ST6GALNAC1 (ENSCHIG00000025600)
Rambouillet Sheep	MODERN SPECIES	2	ENGASE (ENSOARG00020012300) #7	C1QTNF1 (ENSOARG00020012269) #8	CANT1 (ENSOARG00020012223) #9	LGALS3BP (ENSOARG00020012170) #10	TIMP2 (ENSOARG00020012050) #12	ENSOARG00020011905 #13	CYTH1 (ENSOARG00020011632) #14	DNAH17 (ENSOARG00020010169) #15	PGS1 (ENSOARG00020009946) #16	SOCS3 (ENSOARG00020009915) #17	ENSOARG00020009908 #18	TMEM235 (ENSOARG00020009890) #19	ENSOARG00020018998	ENSOARG00020018892 #20	AFMID (ENSOARG00020018639) #21	TK1 (ENSOARG00020018573) #22	SYNGR2 (ENSOARG00020018496) #24	TMC8 (ENSOARG00020018447) #26	TMC6 (ENSOARG00020017886) #27	TNRC6C (ENSOARG00020017467) #28	SEPTIN9 (ENSOARG00020016929) #30	SEC14L1 (ENSOARG00020016741) #31	ENSOARG00020016717	MGAT5B (ENSOARG00020016194) #34	MFSD11 (ENSOARG00020016069) #35	SRSF2 (ENSOARG00020016027) ##36	METTL23 (ENSOARG00020015955)	JMJD6 (ENSOARG00020015823)	ENSOARG00020015694	ENSOARG00020015648	ST6GALNAC1 (ENSOARG00020015509)
Bovinae	ANCESTRAL SPECIES		ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Bos	ANCESTRAL SPECIES	1	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Bos_b	ANCESTRAL SPECIES	21	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.a.a	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Hybrid Bos Indicus	MODERN SPECIES	10	CANT1 (ENSBIXG00005008918) #9	LGALS3BP (ENSBIXG00005008886) #10	TIMP2 (ENSBIXG00005008854) #12	USP36 (ENSBIXG00005008814) #13	CYTH1 (ENSBIXG00005008782) #14	ENSBIXG00005008756	ENSBIXG00005008737	DNAH17 (ENSBIXG00005005939) #15	PGS1 (ENSBIXG00005008684) #16	ENSBIXG00005008666 #17	ENSBIXG00005000242 #18	TMEM235 (ENSBIXG00005008634) #19	BIRC5 (ENSBIXG00005008609) #20	ENSBIXG00005008596	ENSBIXG00005008576 #21	TK1 (ENSBIXG00005006402) #22	SYNGR2 (ENSBIXG00005008511) #24	TMC8 (ENSBIXG00005008492) #26	TMC6 (ENSBIXG00005008474) #27	TNRC6C (ENSBIXG00005008368) #28	ENSBIXG00005008178	SEPTIN9 (ENSBIXG00005008121) #30	SEC14L1 (ENSBIXG00005008015) #31	MGAT5B (ENSBIXG00005007961) #34	MFSD11 (ENSBIXG00005007937) #35	SRSF2 (ENSBIXG00005000023) ##36	METTL23 (ENSBIXG00005007880)	ENSBIXG00005029269	ST6GALNAC1 (ENSBIXG00005029310)	ST6GALNAC2 (ENSBIXG00005029323)	ENSBIXG00005029339
Cow	MODERN SPECIES	10	ENGASE (ENSBTAG00000006277) #7	C1QTNF1 (ENSBTAG00000006276) #8	CANT1 (ENSBTAG00000009991) #9	LGALS3BP (ENSBTAG00000001368) #10	TIMP2 (ENSBTAG00000010899) #12	USP36 (ENSBTAG00000021505) #13	CYTH1 (ENSBTAG00000006663) #14	ENSBTAG00000049264	DNAH17 (ENSBTAG00000000920) #15	PGS1 (ENSBTAG00000000675) #16	SOCS3 (ENSBTAG00000008441) #17	THA1 (ENSBTAG00000009029) #18	TMEM235 (ENSBTAG00000024926) #19	BIRC5 (ENSBTAG00000013573) #20	AFMID (ENSBTAG00000007125) #21	TK1 (ENSBTAG00000007121) #22	SYNGR2 (ENSBTAG00000019069) #24	TMC8 (ENSBTAG00000019067) #26	TMC6 (ENSBTAG00000018661) #27	TNRC6C (ENSBTAG00000018658) #28	SEPTIN9 (ENSBTAG00000002633) #30	SEC14L1 (ENSBTAG00000013677) #31	ENSBTAG00000051647	MGAT5B (ENSBTAG00000005104) #34	MFSD11 (ENSBTAG00000018260) #35	SRSF2 (ENSBTAG00000018258) ##36	METTL23 (ENSBTAG00000044138)	JMJD6 (ENSBTAG00000019153)	ENSBTAG00000051982	ST6GALNAC1 (ENSBTAG00000001998)	ST6GALNAC2 (ENSBTAG00000015255)
Bos_a	ANCESTRAL SPECIES		ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00950000185984	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000159930	ENSGT00940000160433	ENSGT00960000191592
Domestic yak	MODERN SPECIES	10	C1QTNF1 (ENSBGRG00000019832) #8	CANT1 (ENSBGRG00000019794) #9	LGALS3BP (ENSBGRG00000019711) #10	ENSBGRG00000019651 #11	TIMP2 (ENSBGRG00000019564) #12	USP36 (ENSBGRG00000019284) #13	CYTH1 (ENSBGRG00000018986) #14	ENSBGRG00000018957	DNAH17 (ENSBGRG00000017393) #15	PGS1 (ENSBGRG00000017127) #16	SOCS3 (ENSBGRG00000017084) #17	ENSBGRG00000016929 #18	TMEM235 (ENSBGRG00000016880) #19	BIRC5 (ENSBGRG00000016705) #20	AFMID (ENSBGRG00000016461) #21	TK1 (ENSBGRG00000016350) #22	SYNGR2 (ENSBGRG00000016265) #24	TMC8 (ENSBGRG00000015838) #26	TMC6 (ENSBGRG00000015167) #27	TNRC6C (ENSBGRG00000013779) #28	SEPTIN9 (ENSBGRG00000013145) #30	SEC14L1 (ENSBGRG00000012852) #31	ENSBGRG00000012809	MGAT5B (ENSBGRG00000012141) #34	MFSD11 (ENSBGRG00000011899) #35	SRSF2 (ENSBGRG00000011845) ##36	METTL23 (ENSBGRG00000011764)	ENSBGRG00000011511	ENSBGRG00000011356	ST6GALNAC1 (ENSBGRG00000011272)	ST6GALNAC2 (ENSBGRG00000011048)
Wild yak	MODERN SPECIES	2635												ENSBMUG00000009673 #18	TMEM235 (ENSBMUG00000009723) #19	ENSBMUG00000009765 #20	AFMID (ENSBMUG00000010146) #21	TK1 (ENSBMUG00000010189) #22	SYNGR2 (ENSBMUG00000010213) #24	TMC8 (ENSBMUG00000010244) #26	TMC6 (ENSBMUG00000010329) #27	TNRC6C (ENSBMUG00000010466) #28
American bison	MODERN SPECIES	3285	ENGASE (ENSBBBG00000018429) #7	C1QTNF1 (ENSBBBG00000004528) #8	CANT1 (ENSBBBG00000004537) #9	LGALS3BP (ENSBBBG00000018491) #10	ENSBBBG00000018496 #11	TIMP2 (ENSBBBG00000009138) #12	ENSBBBG00000004561 #13	CYTH1 (ENSBBBG00000018583) #14	DNAH17 (ENSBBBG00000018723) #15	PGS1 (ENSBBBG00000018767) #16	SOCS3 (ENSBBBG00000018786) #17	ENSBBBG00000004733 #18	TMEM235 (ENSBBBG00000004738) #19	ENSBBBG00000018840 #20	AFMID (ENSBBBG00000018881) #21	TK1 (ENSBBBG00000018905) #22	SYNGR2 (ENSBBBG00000004785) #24	TMC8 (ENSBBBG00000009153) #26	TMC6 (ENSBBBG00000004871) #27	TNRC6C (ENSBBBG00000019121) #28	SEPTIN9 (ENSBBBG00000019364) #30	SEC14L1 (ENSBBBG00000019477) #31	ENSBBBG00000005253	MGAT5B (ENSBBBG00000019525) #34	MFSD11 (ENSBBBG00000005195) #35	SRSF2 (ENSBBBG00000005332) ##36	METTL23 (ENSBBBG00000019677)	JMJD6 (ENSBBBG00000019708)	ENSBBBG00000019719	ST6GALNAC1 (ENSBBBG00000019727)	ST6GALNAC2 (ENSBBBG00000005156)
Siberian musk deer	MODERN SPECIES	1210	RBFOX3 (ENSMMSG00000023091)	ENGASE (ENSMMSG00000023155) #7	C1QTNF1 (ENSMMSG00000023165) #8	CANT1 (ENSMMSG00000023167) #9	LGALS3BP (ENSMMSG00000023174) #10	TIMP2 (ENSMMSG00000023190) #12	USP36 (ENSMMSG00000023202) #13	CYTH1 (ENSMMSG00000023219) #14	DNAH17 (ENSMMSG00000023255) #15	PGS1 (ENSMMSG00000023378) #16	SOCS3 (ENSMMSG00000023394) #17	ENSMMSG00000023396 #18	TMEM235 (ENSMMSG00000023402) #19	BIRC5 (ENSMMSG00000023409) #20	AFMID (ENSMMSG00000023421) #21	TK1 (ENSMMSG00000023436) #22	SYNGR2 (ENSMMSG00000023451) #24	TMC8 (ENSMMSG00000023462) #26	TMC6 (ENSMMSG00000023480) #27	TNRC6C (ENSMMSG00000023512) #28	SEPTIN9 (ENSMMSG00000023612) #30	SEC14L1 (ENSMMSG00000023651) #31	MGAT5B (ENSMMSG00000023699) #34	MFSD11 (ENSMMSG00000023737) #35	SRSF2 (ENSMMSG00000023746) ##36	METTL23 (ENSMMSG00000023752)	JMJD6 (ENSMMSG00000023758)	ENSMMSG00000023765	ST6GALNAC1 (ENSMMSG00000023772)	ST6GALNAC2 (ENSMMSG00000023782)	PRCD (ENSMMSG00000023794)
Yarkand deer	MODERN SPECIES	28	RBFOX3 (ENSCHYG00000011816)	ENGASE (ENSCHYG00000011955) #7	C1QTNF1 (ENSCHYG00000012120) #8	CANT1 (ENSCHYG00000012161) #9	LGALS3BP (ENSCHYG00000012191) #10	ENSCHYG00000012262 #12	USP36 (ENSCHYG00000012337) #13	CYTH1 (ENSCHYG00000012465) #14	DNAH17 (ENSCHYG00000012711) #15	PGS1 (ENSCHYG00000014050) #16	SOCS3 (ENSCHYG00000014205) #17	ENSCHYG00000014236 #18	ENSCHYG00000014389 #19	BIRC5 (ENSCHYG00000014457) #20	AFMID (ENSCHYG00000014537) #21	TK1 (ENSCHYG00000014728) #22	SYNGR2 (ENSCHYG00000014850) #24	TMC8 (ENSCHYG00000014924) #26	TMC6 (ENSCHYG00000015274) #27	TNRC6C (ENSCHYG00000015809) #28	SEPTIN9 (ENSCHYG00000017056) #30	SEC14L1 (ENSCHYG00000018112) #31	MGAT5B (ENSCHYG00000018846) #34	MFSD11 (ENSCHYG00000018983) #35	SRSF2 (ENSCHYG00000019285) ##36	METTL23 (ENSCHYG00000019362)	ENSCHYG00000019451	ENSCHYG00000019683	ST6GALNAC1 (ENSCHYG00000019718)	ENSCHYG00000019873	PRCD (ENSCHYG00000020099)
Camelidae	ANCESTRAL SPECIES	38	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00510000047537.v #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.h #36	ENSGT00510000048008	ENSGT00940000156867.a	ENSGT00940000159930	ENSGT00940000160433	ENSGT00520000058096
Arabian camel	MODERN SPECIES	7	RBFOX3 (ENSCDRG00005019065)	ENGASE (ENSCDRG00005019222) #7	C1QTNF1 (ENSCDRG00005019284) #8	CANT1 (ENSCDRG00005019297) #9	LGALS3BP (ENSCDRG00005019316) #10	TIMP2 (ENSCDRG00005019340) #12	ENSCDRG00005019376 ##11	ENSCDRG00005019391 #13	CYTH1 (ENSCDRG00005019437) #14	DNAH17 (ENSCDRG00005019649) #15	PGS1 (ENSCDRG00005021016) #16	SOCS3 (ENSCDRG00005021022) #17	ENSCDRG00005021024 #18	BIRC5 (ENSCDRG00005021055) #20	AFMID (ENSCDRG00005021067) #21	TK1 (ENSCDRG00005021081) #22	SYNGR2 (ENSCDRG00005021090) #24	ENSCDRG00005021098 #25	TMC8 (ENSCDRG00005021106) #26	TMC6 (ENSCDRG00005021116) #27	TNRC6C (ENSCDRG00005021137) #28	ENSCDRG00005021146 #30	ENSCDRG00005021152 #30	SEC14L1 (ENSCDRG00005021168) #31	ENSCDRG00005021193	MGAT5B (ENSCDRG00005021200) #34	MFSD11 (ENSCDRG00005021209) #35	ENSCDRG00005021215 #36	METTL23 (ENSCDRG00005021219)	JMJD6 (ENSCDRG00005021223)	ENSCDRG00005021232
Eulipotyphla	ANCESTRAL SPECIES	1235															ENSGT00390000011093 #21	ENSGT00390000011309 #22
Common shrew	MODERN SPECIES	4884																TK1 (ENSSARG00000003666) #22
Hedgehog	MODERN SPECIES	6276															AFMID (ENSEEUG00000002364) #21	TK1 (ENSEEUG00000013073) #22
Atlantogenata	ANCESTRAL SPECIES	21	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000168180	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883.g.b ##36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433
Xenarthra	ANCESTRAL SPECIES	262							ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28
Armadillo	MODERN SPECIES	1730				C1QTNF1 (ENSDNOG00000047974) #8	ENSDNOG00000043468	ENSDNOG00000040735	CANT1 (ENSDNOG00000040016) #9	ENSDNOG00000043334 #11	TIMP2 (ENSDNOG00000032504) #12	USP36 (ENSDNOG00000008067) #13	CYTH1 (ENSDNOG00000041155) #14	PGS1 (ENSDNOG00000017675) #16	SOCS3 (ENSDNOG00000007855) #17	ENSDNOG00000031880	AFMID (ENSDNOG00000015462) #21	TK1 (ENSDNOG00000031481) #22	SYNGR2 (ENSDNOG00000041680) #24	ENSDNOG00000015459 #25	TMC8 (ENSDNOG00000042416) #26	TMC6 (ENSDNOG00000012854) #27	TNRC6C (ENSDNOG00000003247) #28
Afrotheria	ANCESTRAL SPECIES	18	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000168180	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433	ENSGT00940000155004
Tenrec	MODERN SPECIES	6094															AFMID (ENSETEG00000002137) #21	TK1 (ENSETEG00000002133) #22
Afrotheria_a	ANCESTRAL SPECIES	25	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000168180	ENSGT00940000153123.A.f #11	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00510000048008	ENSGT00940000156867	ENSGT00940000163380	ENSGT00940000159930	ENSGT00940000160433	ENSGT00940000155004
Elephant	MODERN SPECIES	424	ENGASE (ENSLAFG00000001052) #7	C1QTNF1 (ENSLAFG00000031854) #8	CANT1 (ENSLAFG00000003466) #9	ENSLAFG00000029091	ENSLAFG00000027322 #11	TIMP2 (ENSLAFG00000029379) #12	USP36 (ENSLAFG00000014285) #13	CYTH1 (ENSLAFG00000008813) #14	ENSLAFG00000022932 #15	ENSLAFG00000030744 #15	PGS1 (ENSLAFG00000031168) #16	SOCS3 (ENSLAFG00000025968) #17	ENSLAFG00000028491 #18	BIRC5 (ENSLAFG00000006585) #20	AFMID (ENSLAFG00000018451) #21	TK1 (ENSLAFG00000018448) #22	SYNGR2 (ENSLAFG00000023300) #24	ENSLAFG00000032068 #25	ENSLAFG00000031869 #26	TMC6 (ENSLAFG00000022814) #27	TNRC6C (ENSLAFG00000011122) #28	SEPTIN9 (ENSLAFG00000007655) #30	SEC14L1 (ENSLAFG00000018680) #31	MGAT5B (ENSLAFG00000016166) #34	MFSD11 (ENSLAFG00000015493) #35	METTL23 (ENSLAFG00000007474)	JMJD6 (ENSLAFG00000028280)	ENSLAFG00000015485	ST6GALNAC1 (ENSLAFG00000000363)	ST6GALNAC2 (ENSLAFG00000021338)	CYGB (ENSLAFG00000030377)
Hyrax	MODERN SPECIES	5140															ENSPCAG00000016602 #21	TK1 (ENSPCAG00000016553) #22	SYNGR2 (ENSPCAG00000016541) #24	ENSPCAG00000016504 #25	TMC8 (ENSPCAG00000016389) #26
Marsupialia	ANCESTRAL SPECIES	13	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00550000075160	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883 #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00990000207599	ENSGT00940000157100
Opossum	DUPLICATION
Opossum	MODERN SPECIES	1	RBFOX3 (ENSMODG00000002089)	ENGASE (ENSMODG00000002037) #7	CANT1 (ENSMODG00000039608) #9	C1QTNF1 (ENSMODG00000048078) #8	TIMP2 (ENSMODG00000002014) #12	USP36 (ENSMODG00000001999) #13	CYTH1 (ENSMODG00000001988) #14	ENSMODG00000039389 #15	ENSMODG00000001957 #15	PGS1 (ENSMODG00000001893) #16	SOCS3 (ENSMODG00000001881) #17	ENSMODG00000001879	ENSMODG00000045912	ENSMODG00000041409 #20	ENSMODG00000001846 #24	ENSMODG00000001854 #22	TMC8 (ENSMODG00000001820) #26	TMC6 (ENSMODG00000001805) #27	TNRC6C (ENSMODG00000001785) #28	ENSMODG00000023883	SEPTIN9 (ENSMODG00000001652) #30	SEC14L1 (ENSMODG00000001638) #31	POLR1D (ENSMODG00000023881)	ENSMODG00000047646	ENSMODG00000027486	MGAT5B (ENSMODG00000001601) #34	MFSD11 (ENSMODG00000001580) #35	ENSMODG00000001575 #36	METTL23 (ENSMODG00000001570)	JMJD6 (ENSMODG00000001566)	ENSMODG00000045330
Opossum	MODERN SPECIES		ENSMODG00000049818	ENSMODG00000012539	SERPINA7 (ENSMODG00000012531)	ENSMODG00000012431	SERPINA11 (ENSMODG00000012397)	SERPINA1 (ENSMODG00000012391)	MYOT (ENSMODG00000012262)	PKD2L2 (ENSMODG00000012258)	FAM13B (ENSMODG00000012247)	ENSMODG00000045871	NME5 (ENSMODG00000012230)	BRD8 (ENSMODG00000012223)	KIF20A (ENSMODG00000012205)	CDC23 (ENSMODG00000012197)	ENSMODG00000046107	ENSMODG00000003840 #22	ENSMODG00000012187	ENSMODG00000012179	ENSMODG00000012173	FAM53C (ENSMODG00000044143)	KDM3B (ENSMODG00000012144)	REEP2 (ENSMODG00000012124)	EGR1 (ENSMODG00000012118)	ETF1 (ENSMODG00000012115)	HSPA9 (ENSMODG00000012083)	ENSMODG00000012050	LRRTM2 (ENSMODG00000039353)	SIL1 (ENSMODG00000011979)	MATR3 (ENSMODG00000011925)	SLC23A1 (ENSMODG00000011886)	PAIP2 (ENSMODG00000011895)
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244808.F #25	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00550000075160	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883 #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00990000207599	ENSGT00940000157100
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000027579	RBFOX3 (ENSSHAG00000024352)	ENGASE (ENSSHAG00000016228) #7	C1QTNF1 (ENSSHAG00000028640) #8	CANT1 (ENSSHAG00000016498) #9	ENSSHAG00000016521	ENSSHAG00000020837	TIMP2 (ENSSHAG00000022348) #12	USP36 (ENSSHAG00000016986) #13	CYTH1 (ENSSHAG00000017316) #14	DNAH17 (ENSSHAG00000017562) #15	PGS1 (ENSSHAG00000017730) #16	ENSSHAG00000031772 #17	ENSSHAG00000023869	ENSSHAG00000028609 #20	TK1 (ENSSHAG00000018200) #22	SYNGR2 (ENSSHAG00000024952) #24	ENSSHAG00000018227 #25	TMC8 (ENSSHAG00000018247) #26	TMC6 (ENSSHAG00000018281) #27	TNRC6C (ENSSHAG00000018330) #28	SEPTIN9 (ENSSHAG00000006546) #30	SEC14L1 (ENSSHAG00000010015) #31	ENSSHAG00000023322	MGAT5B (ENSSHAG00000001187) #34	MFSD11 (ENSSHAG00000005523) #35	ENSSHAG00000025704 #36	ENSSHAG00000005983	ENSSHAG00000006038	ENSSHAG00000001993	GLP2R (ENSSHAG00000004094)
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00550000075160	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883 #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00990000207599	ENSGT00940000157100	ENSGT00940000158127
Wallaby	MODERN SPECIES	1780																ENSMEUG00000002886 #22	ENSMEUG00000002881 #24
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00940000157598 #28	ENSGT00940000157195 #30	ENSGT00940000155386 #31	ENSGT00550000075160	ENSGT00940000153470.a.b.b #34	ENSGT00390000012918.c #35	ENSGT00940000154883 #36	ENSGT00510000048008	ENSGT00940000156867	ENSGT00990000207599	ENSGT00940000157100	ENSGT00940000158127
Common wonbat	MODERN SPECIES	571	CBX2 (ENSVURG00010010053)	ENPP7 (ENSVURG00010010061)	ENSVURG00010010080	ENSVURG00010010102	ENSVURG00010010116 #8	CANT1 (ENSVURG00010010128) #9	TIMP2 (ENSVURG00010010148) #12	USP36 (ENSVURG00010010161) #13	CYTH1 (ENSVURG00010010214) #14	DNAH17 (ENSVURG00010010290) #15	PGS1 (ENSVURG00010010450) #16	SOCS3 (ENSVURG00010010460) #17	ENSVURG00010010462	ENSVURG00010010472 #20	AFMID (ENSVURG00010010484) #21	TK1 (ENSVURG00010010495) #22	SYNGR2 (ENSVURG00010010498) #24	TMC8 (ENSVURG00010010509) #26	TMC6 (ENSVURG00010010531) #27	TNRC6C (ENSVURG00010010574) #28	ENSVURG00010010743	ENSVURG00010010760 #20	SEPTIN9 (ENSVURG00010010794) #30	SEC14L1 (ENSVURG00010010838) #31	POLR1D (ENSVURG00010010952)	MGAT5B (ENSVURG00010010964) #34	MFSD11 (ENSVURG00010010982) #35	ENSVURG00010011000 #36	METTL23 (ENSVURG00010011012)	JMJD6 (ENSVURG00010011038)	ENSVURG00010011059
koala	MODERN SPECIES	164						CANT1 (ENSPCIG00000005749) #9	TIMP2 (ENSPCIG00000005739) #12	USP36 (ENSPCIG00000005731) #13	CYTH1 (ENSPCIG00000005717) #14	DNAH17 (ENSPCIG00000016453) #15	PGS1 (ENSPCIG00000005551) #16	SOCS3 (ENSPCIG00000005546) #17	ENSPCIG00000005538	ENSPCIG00000005533 #20	AFMID (ENSPCIG00000005519) #21	TK1 (ENSPCIG00000005510) #22	SYNGR2 (ENSPCIG00000005505) #24	TMC8 (ENSPCIG00000005487) #26	TMC6 (ENSPCIG00000005460) #27	TNRC6C (ENSPCIG00000017421) #28	ENSPCIG00000003818	SEPTIN9 (ENSPCIG00000005381) #30	SEC14L1 (ENSPCIG00000005362) #31	POLR1D (ENSPCIG00000001673)	MGAT5B (ENSPCIG00000005351) #34	MFSD11 (ENSPCIG00000005340) #35	ENSPCIG00000005334 #36	METTL23 (ENSPCIG00000005328)	JMJD6 (ENSPCIG00000005317)	ENSPCIG00000005310	DHRS7C (ENSPCIG00000005302)
Platypus	MODERN SPECIES	45	ENSOANG00000043539	CBX8 (ENSOANG00000045780)	CBX2 (ENSOANG00000036665)	ENPP7 (ENSOANG00000039318)	C1QTNF1 (ENSOANG00000008847) #8	CANT1 (ENSOANG00000041496) #9	TIMP2 (ENSOANG00000043622) #12	ENSOANG00000050317 #13	CYTH1 (ENSOANG00000003476) #14	DNAH17 (ENSOANG00000000647) #15	PGS1 (ENSOANG00000000646) #16	SOCS3 (ENSOANG00000010894) #17	ENSOANG00000050703 #18	BIRC5 (ENSOANG00000046513) #20	ENSOANG00000020757 #21	TK1 (ENSOANG00000004467) #22	SYNGR2 (ENSOANG00000004466) #24	ENSOANG00000004465 #25	ENSOANG00000004464 ##26	ENSOANG00000050140 #27	TNRC6C (ENSOANG00000009758) #28	SEPTIN9 (ENSOANG00000001759) #30	SEC14L1 (ENSOANG00000007056) #31	ENSOANG00000041894	MFSD11 (ENSOANG00000011571) #35	ENSOANG00000002695 #36	METTL23 (ENSOANG00000011570)	JMJD6 (ENSOANG00000011569)	ENSOANG00000041454	ENSOANG00000011568	ST6GALNAC2 (ENSOANG00000015021)
Sauria	ANCESTRAL SPECIES	29	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615
Lepidosauria	ANCESTRAL SPECIES	28	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615
Episquamata	ANCESTRAL SPECIES	4	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT01010000229583	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT01010000229583	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814	ENSGT00550000075186
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c.a #15	ENSGT00390000002373 #16	ENSGT01010000229583	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00730000111327.g	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00550000075186	ENSGT00940000158204.a
Elapidae_a	ANCESTRAL SPECIES	18	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c.a #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.e #24	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00730000111327.g	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b.w	ENSGT00410000025615	ENSGT00550000075186	ENSGT00940000158204.a
Acanthophiinae	ANCESTRAL SPECIES	18	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c.a #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.e #24	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00730000111327.g	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b.w	ENSGT00410000025615	ENSGT00550000075186	ENSGT00940000158204.a
Eastern brown snake	MODERN SPECIES	17	ENSPTXG00000003229	ENSPTXG00000003230	RBFOX3 (ENSPTXG00000003231)	ENGASE (ENSPTXG00000003233) #7	C1QTNF1 (ENSPTXG00000003234) #8	CANT1 (ENSPTXG00000003235) #9	TIMP2 (ENSPTXG00000003236) #12	USP36 (ENSPTXG00000003237) #13	CYTH1 (ENSPTXG00000003238) #14	DNAH17 (ENSPTXG00000003245) #15	PGS1 (ENSPTXG00000003251) #16	SOCS3 (ENSPTXG00000003252) #17	TMEM235 (ENSPTXG00000003253) #19	BIRC5 (ENSPTXG00000003254) #20	AFMID (ENSPTXG00000003255) #21	TK1 (ENSPTXG00000003256) #22	ENSPTXG00000003257 #24	TMC6 (ENSPTXG00000003259) #27	ARL16 (ENSPTXG00000003261)	HGS (ENSPTXG00000003262)	MRPL12 (ENSPTXG00000003264)	SLC25A10 (ENSPTXG00000003266)	GCGR (ENSPTXG00000003276)	MCRIP1 (ENSPTXG00000003281)	PPP1R27 (ENSPTXG00000003284)	P4HB (ENSPTXG00000003285)	ENSPTXG00000003287	ALYREF (ENSPTXG00000003288)	ANAPC11 (ENSPTXG00000003290)	NPB (ENSPTXG00000003291)	PCYT2 (ENSPTXG00000003292)
Mainland tiger snake	MODERN SPECIES	19	ENSNSUG00000009769	ENSNSUG00000009770	RBFOX3 (ENSNSUG00000009775)	ENGASE (ENSNSUG00000009782) #7	C1QTNF1 (ENSNSUG00000009785) #8	CANT1 (ENSNSUG00000009786) #9	TIMP2 (ENSNSUG00000009787) #12	USP36 (ENSNSUG00000009788) #13	CYTH1 (ENSNSUG00000009789) #14	DNAH17 (ENSNSUG00000010042) #15	PGS1 (ENSNSUG00000010048) #16	SOCS3 (ENSNSUG00000010049) #17	TMEM235 (ENSNSUG00000010052) #19	BIRC5 (ENSNSUG00000010055) #20	AFMID (ENSNSUG00000010057) #21	TK1 (ENSNSUG00000010059) #22	ENSNSUG00000010067 #24	ENSNSUG00000010068	ENSNSUG00000010070 #27	ARL16 (ENSNSUG00000010073)	HGS (ENSNSUG00000010079)	MRPL12 (ENSNSUG00000010556)	SLC25A10 (ENSNSUG00000010557)	GCGR (ENSNSUG00000010619)	MCRIP1 (ENSNSUG00000010623)	PPP1R27 (ENSNSUG00000010625)	P4HB (ENSNSUG00000010628)	ENSNSUG00000010631	ALYREF (ENSNSUG00000010633)	ANAPC11 (ENSNSUG00000010635)	NPB (ENSNSUG00000010637)
Blue-lipped sea krait	MODERN SPECIES	1503														ENSLLTG00000001865 #21	ENSLLTG00000001872	TK1 (ENSLLTG00000001881) #22	ENSLLTG00000001892 #24	TMC6 (ENSLLTG00000001905) #27	ARL16 (ENSLLTG00000001934)
Indian cobra	MODERN SPECIES	1	RBFOX3 (ENSNNAG00000013436)	ENGASE (ENSNNAG00000013399) #7	CANT1 (ENSNNAG00000013377) #9	TIMP2 (ENSNNAG00000013359) #12	USP36 (ENSNNAG00000013276) #13	CYTH1 (ENSNNAG00000013187) #14	ENSNNAG00000013166 #15	ENSNNAG00000013141 #15	ENSNNAG00000013082 #15	PGS1 (ENSNNAG00000013053) #16	ENSNNAG00000013033	SOCS3 (ENSNNAG00000013027) #17	TMEM235 (ENSNNAG00000012995) #19	BIRC5 (ENSNNAG00000012975) #20	AFMID (ENSNNAG00000012946) #21	TK1 (ENSNNAG00000012888) #22	SYNGR2 (ENSNNAG00000012870) #24	TMC6 (ENSNNAG00000012816) #27	ARL16 (ENSNNAG00000012800)	HGS (ENSNNAG00000012756)	MRPL12 (ENSNNAG00000012741)	SLC25A10 (ENSNNAG00000012719)	GCGR (ENSNNAG00000012659)	MCRIP1 (ENSNNAG00000012644)	PPP1R27 (ENSNNAG00000012631)	P4HB (ENSNNAG00000012550)	ARHGDIA (ENSNNAG00000012520)	ALYREF (ENSNNAG00000012493)	ANAPC11 (ENSNNAG00000012477)	NPB (ENSNNAG00000012440)	PCYT2 (ENSNNAG00000012404)
Lizard	MODERN SPECIES	1	C1QTNF1 (ENSACAG00000029556) #8	CANT1 (ENSACAG00000016215) #9	TIMP2 (ENSACAG00000035679) #12	USP36 (ENSACAG00000016248) #13	CYTH1 (ENSACAG00000016295) #14	DNAH17 (ENSACAG00000016335) #15	ENSACAG00000043477	PGS1 (ENSACAG00000016662) #16	SOCS3 (ENSACAG00000042346) #17	ENSACAG00000042135	ENSACAG00000044072	ENSACAG00000016705 #18	TMEM235 (ENSACAG00000028438) #19	BIRC5 (ENSACAG00000037931) #20	AFMID (ENSACAG00000016716) #21	tk1 (ENSACAG00000016730) #22	SYNGR2 (ENSACAG00000016746) #24	TMC8 (ENSACAG00000016750) #26	ENSACAG00000016792 #27	ENSACAG00000016807	ENSACAG00000016808	ENSACAG00000043866	ENSACAG00000016840	ENSACAG00000016849	ENSACAG00000016953	PTGER1 (ENSACAG00000017009)	GIPC1 (ENSACAG00000017014)	DNAJB1 (ENSACAG00000034628)	TECR (ENSACAG00000017027)	NDUFB7 (ENSACAG00000017055)	ENSACAG00000041391
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000162516 #10	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.A ##15	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT01010000229583	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00510000047537 #20	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814
Common wall lizard	MODERN SPECIES	10	LGALS3BP (ENSPMRG00000002340) #10	TIMP2 (ENSPMRG00000002347) #12	USP36 (ENSPMRG00000002361) #13	CYTH1 (ENSPMRG00000002373) #14	DNAH17 (ENSPMRG00000002702) #15	PGS1 (ENSPMRG00000004415) #16	ENSPMRG00000004417	ENSPMRG00000004422 #17	ENSPMRG00000004427	ENSPMRG00000004429 #17	ENSPMRG00000004432 #18	TMEM235 (ENSPMRG00000004439) #19	ENSPMRG00000004442	BIRC5 (ENSPMRG00000004450) #20	AFMID (ENSPMRG00000004478) #21	TK1 (ENSPMRG00000004491) #22	SYNGR2 (ENSPMRG00000004494) #24	TMC8 (ENSPMRG00000004500) #26	TMC6 (ENSPMRG00000004507) #27	ARL16 (ENSPMRG00000004522)	HGS (ENSPMRG00000004531)	ENSPMRG00000004543	MRPL12 (ENSPMRG00000004553)	SLC25A10 (ENSPMRG00000004568)	GCGR (ENSPMRG00000005725)	MCRIP1 (ENSPMRG00000005738)	PPP1R27 (ENSPMRG00000005749)	ENSPMRG00000005757	P4HB (ENSPMRG00000005775)	ALYREF (ENSPMRG00000005805)	ENSPMRG00000005818
Argentine black and white tegu	MODERN SPECIES	1	ENSSMRG00000023387	PRMT8 (ENSSMRG00000023386)	CRACR2A (ENSSMRG00000023384)	ENSSMRG00000023382	ENSSMRG00000023381	FGF23 (ENSSMRG00000023380)	ENSSMRG00000023379	C12orf4 (ENSSMRG00000023378)	ENSSMRG00000023377 #15	PGS1 (ENSSMRG00000023376) #16	SOCS3 (ENSSMRG00000023375) #17	ENSSMRG00000023372 #18	TMEM235 (ENSSMRG00000023371) #19	ENSSMRG00000023370 #20	AFMID (ENSSMRG00000023369) #21	TK1 (ENSSMRG00000023368) #22	SYNGR2 (ENSSMRG00000023367) #24	TMC8 (ENSSMRG00000023366) #26	TMC6 (ENSSMRG00000023365) #27	ARL16 (ENSSMRG00000023364)	HGS (ENSSMRG00000023363)	ENSSMRG00000023362	MRPL12 (ENSSMRG00000023361)	SLC25A10 (ENSSMRG00000023360)	GCGR (ENSSMRG00000023359)	MCRIP1 (ENSSMRG00000023358)	PPP1R27 (ENSSMRG00000023357)	P4HB (ENSSMRG00000023356)	ARHGDIA (ENSSMRG00000023355)	ENSSMRG00000023354	ALYREF (ENSSMRG00000023353)
tuatara	MODERN SPECIES	1429	CBX8 (ENSSPUG00000011823)	ENSSPUG00000011795	ENSSPUG00000011788	RBFOX3 (ENSSPUG00000011733)	C1QTNF1 (ENSSPUG00000011676) #8	CANT1 (ENSSPUG00000011669) #9	TIMP2 (ENSSPUG00000011659) #12	ENSSPUG00000011635 #13	CYTH1 (ENSSPUG00000011590) #14	DNAH17 (ENSSPUG00000011399) #15	PGS1 (ENSSPUG00000011357) #16	SOCS3 (ENSSPUG00000011349) #17	ENSSPUG00000011317 #18	BIRC5 (ENSSPUG00000011300) #20	AFMID (ENSSPUG00000011285) #21	TK1 (ENSSPUG00000011273) #22	SYNGR2 (ENSSPUG00000011258) #24	TMC6 (ENSSPUG00000011230) #27	ENSSPUG00000011216	ARL16 (ENSSPUG00000011195)	HGS (ENSSPUG00000011094)	ENSSPUG00000011067	MRPL12 (ENSSPUG00000011062)	SLC25A10 (ENSSPUG00000011030)	GCGR (ENSSPUG00000011005)	MCRIP1 (ENSSPUG00000010978)	PPP1R27 (ENSSPUG00000010964)	P4HB (ENSSPUG00000010934)	ARHGDIA (ENSSPUG00000010913)	UTP18 (ENSSPUG00000010862)	MBTD1 (ENSSPUG00000010840)
Archelosauria	ANCESTRAL SPECIES	19	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615
Archosauria	ANCESTRAL SPECIES	12	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814	ENSGT00550000075186
Aves	ANCESTRAL SPECIES	17	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814	ENSGT00550000075186
Neognathae	ANCESTRAL SPECIES	17	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814	ENSGT00550000075186
Galloanserae	ANCESTRAL SPECIES	19	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814	ENSGT00550000075186
Anatidae	ANCESTRAL SPECIES	63	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512.a #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00950000184814	ENSGT00550000075186
Pink-footed goose	MODERN SPECIES	276	CBX2 (ENSABRG00000011951)	ENSABRG00000011939	RBFOX3 (ENSABRG00000011923)	ENGASE (ENSABRG00000011907) #7	C1QTNF1 (ENSABRG00000011898) #8	ENSABRG00000011890	CANT1 (ENSABRG00000011885) #9	TIMP2 (ENSABRG00000011879) #12	USP36 (ENSABRG00000011853) #13	CYTH1 (ENSABRG00000011469) #14	DNAH17 (ENSABRG00000011417) #15	PGS1 (ENSABRG00000011411) #16	SOCS3 (ENSABRG00000011408) #17	ENSABRG00000011404 #18	AFMID (ENSABRG00000011396) #21	TK1 (ENSABRG00000011386) #22	SYNGR2 (ENSABRG00000011383) #24	TMC6 (ENSABRG00000011377) #27	ENSABRG00000011375	ENSABRG00000011372	HGS (ENSABRG00000011359)	MRPL12 (ENSABRG00000011352)	SLC25A10 (ENSABRG00000011343)	GCGR (ENSABRG00000011281)	MCRIP1 (ENSABRG00000011244)	PPP1R27 (ENSABRG00000011240)	P4HB (ENSABRG00000011233)	ARHGDIA (ENSABRG00000011188)	ALYREF (ENSABRG00000011176)	ENSABRG00000011165	ANAPC11 (ENSABRG00000011160)
Duck	MODERN SPECIES	2011																TK1 (ENSAPLG00000018568) #22	SYNGR2 (ENSAPLG00000012174) #24
Phasianidae	ANCESTRAL SPECIES	18	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000175873	ENSGT00940000159603	ENSGT00940000157351.s	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00550000075186	ENSGT00940000158204.a	ENSGT00550000075065
Japanese quail	MODERN SPECIES	9	CBX4 (ENSCJPG00005021189)	CBX8 (ENSCJPG00005021188)	CBX2 (ENSCJPG00005021187)	ENSCJPG00005021186	ENSCJPG00005021185	RBFOX3 (ENSCJPG00005021183)	ENGASE (ENSCJPG00005021182) #7	CANT1 (ENSCJPG00005021181) #9	TIMP2 (ENSCJPG00005021180) #12	USP36 (ENSCJPG00005021179) #13	CYTH1 (ENSCJPG00005021178) #14	PGS1 (ENSCJPG00005021176) #16	SOCS3 (ENSCJPG00005021175) #17	ENSCJPG00005021174 #18	AFMID (ENSCJPG00005021173) #21	TK1 (ENSCJPG00005021172) #22	SYNGR2 (ENSCJPG00005021171) #24	ENSCJPG00005021169	ARL16 (ENSCJPG00005021168)	MRPL12 (ENSCJPG00005021167)	HGS (ENSCJPG00005021166)	ENSCJPG00005021163	PPP1R27 (ENSCJPG00005021162)	P4HB (ENSCJPG00005021158)	ARHGDIA (ENSCJPG00005021157)	ALYREF (ENSCJPG00005021156)	ANAPC11 (ENSCJPG00005021155)	NPB (ENSCJPG00005021154)	PCYT2 (ENSCJPG00005021110)	SIRT7 (ENSCJPG00005021108)	MAFG (ENSCJPG00005021107)
Phasianidae_b	ANCESTRAL SPECIES	25	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783
Turkey	MODERN SPECIES	12	MAFG (ENSMGAG00000021829)	SIRT7 (ENSMGAG00000005333)	ENSMGAG00000022871	ENSMGAG00000018341	ENSMGAG00000018917	ARHGDIA (ENSMGAG00000005399)	PPP1R27 (ENSMGAG00000005431)	P4HB (ENSMGAG00000005412)	ENSMGAG00000005435	ENSMGAG00000022746	ENSMGAG00000014310	ENSMGAG00000019001	ENSMGAG00000005652	ENSMGAG00000005728 #27	ENSMGAG00000005714	ENSMGAG00000005771 #22	ENSMGAG00000020177 #24	ENSMGAG00000005812 #18	AFMID (ENSMGAG00000005781) #21	ENSMGAG00000005817 #17	ENSMGAG00000005827 #16	ENSMGAG00000005976 #14	ENSMGAG00000005989 #13	ENSMGAG00000016777 #12	ENSMGAG00000005995 #9	ENSMGAG00000017850 #8	ENSMGAG00000006006 #7	ENSMGAG00000005600	ENSMGAG00000005584	ENSMGAG00000021026	ENSMGAG00000019307
Chicken	MODERN SPECIES	9	CBX8 (ENSGALG00010029231)	CBX2 (ENSGALG00010029233)	ENPP7 (ENSGALG00010029236)	RBFOX3 (ENSGALG00010029239)	ENGASE (ENSGALG00010029251) #7	CANT1 (ENSGALG00010029266) #9	C1QTNF1 (ENSGALG00010030103) #8	TIMP2 (ENSGALG00010029270) #12	USP36 (ENSGALG00010029280) #13	CYTH1 (ENSGALG00010029284) #14	DNAH17 (ENSGALG00010029293) #15	PGS1 (ENSGALG00010029294) #16	SOCS3 (ENSGALG00010029295) #17	ENSGALG00010029329 #18	AFMID (ENSGALG00010029330) #21	TK1 (ENSGALG00010029331) #22	SYNGR2 (ENSGALG00010029336) #24	TMC6 (ENSGALG00010029342) #27	ENSGALG00010029344	ARL16 (ENSGALG00010029346)	HGS (ENSGALG00010029348)	MRPL12 (ENSGALG00010029350)	ENSGALG00010029351	GCGR (ENSGALG00010029353)	MCRIP1 (ENSGALG00010029355)	P4HB (ENSGALG00010030104)	ARHGDIA (ENSGALG00010029357)	ALYREF (ENSGALG00010029361)	ANAPC11 (ENSGALG00010029364)	PCYT2 (ENSGALG00010029275)	MAFG (ENSGALG00010029286)
Neognathae_b	ANCESTRAL SPECIES	19	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00550000075186	ENSGT00940000158204.a	ENSGT00550000075065
Passeriformes	ANCESTRAL SPECIES	17	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00550000075186	ENSGT00550000075065	ENSGT00940000159703
Passeriformes_d	ANCESTRAL SPECIES	17	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00550000075186	ENSGT00550000075065	ENSGT00940000159703
Flycatcher	MODERN SPECIES	8	CBX8 (ENSFALG00000025311)	CBX2 (ENSFALG00000012324)	ENSFALG00000025072	ENSFALG00000026765	ENSFALG00000026155	RBFOX3 (ENSFALG00000027524)	ENSFALG00000024689	ENGASE (ENSFALG00000028982) #7	C1QTNF1 (ENSFALG00000012262) #8	CANT1 (ENSFALG00000012207) #14	USP36 (ENSFALG00000012224) #13	DNAH17 (ENSFALG00000011945) #15	PGS1 (ENSFALG00000012194) #16	ENSFALG00000012187 #18	ENSFALG00000028851 #21	TK1 (ENSFALG00000012163) #22	SYNGR2 (ENSFALG00000012155) #24	TMC6 (ENSFALG00000012134) #27	ARL16 (ENSFALG00000027283)	HGS (ENSFALG00000012102)	ENSFALG00000022990	GCGR (ENSFALG00000012013)	MCRIP1 (ENSFALG00000011985)	PPP1R27 (ENSFALG00000028022)	P4HB (ENSFALG00000011969)	ARHGDIA (ENSFALG00000028901)	ALYREF (ENSFALG00000011923)	ANAPC11 (ENSFALG00000025589)	PCYT2 (ENSFALG00000011906)	MAFG (ENSFALG00000024283)	PYCR1 (ENSFALG00000011847)
Passeriformes_g	ANCESTRAL SPECIES	20	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00550000075065	ENSGT00940000159703	ENSGT00940000160070
Passeroidea	ANCESTRAL SPECIES	19	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00940000167007	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00550000075065	ENSGT00940000160070	ENSGT00950000183044.a.a.a
Common canary	MODERN SPECIES	27	CBX8 (ENSSCAG00000011932)	CBX2 (ENSSCAG00000011924)	ENPP7 (ENSSCAG00000011839)	RBFOX3 (ENSSCAG00000011783)	C1QTNF1 (ENSSCAG00000011773) #8	ENGASE (ENSSCAG00000011770) #7	CANT1 (ENSSCAG00000011768) #9	TIMP2 (ENSSCAG00000011762) #12	USP36 (ENSSCAG00000011753) #13	CYTH1 (ENSSCAG00000011741) #14	DNAH17 (ENSSCAG00000011368) #15	PGS1 (ENSSCAG00000011253) #16	SOCS3 (ENSSCAG00000011249) #17	ENSSCAG00000011246 #18	AFMID (ENSSCAG00000011239) #21	TK1 (ENSSCAG00000011238) #22	SYNGR2 (ENSSCAG00000011235) #24	TMC6 (ENSSCAG00000011224) #27	ENSSCAG00000011219	HGS (ENSSCAG00000011212)	SLC25A10 (ENSSCAG00000011205)	GCGR (ENSSCAG00000011196)	PPP1R27 (ENSSCAG00000011194)	P4HB (ENSSCAG00000011084)	ARHGDIA (ENSSCAG00000011033)	ALYREF (ENSSCAG00000011009)	PCYT2 (ENSSCAG00000010923)	MAFG (ENSSCAG00000010892)	ENSSCAG00000010880	MYADML2 (ENSSCAG00000010870)	NOTUM (ENSSCAG00000010854)
Zebra finch	MODERN SPECIES	9	CBX8 (ENSTGUG00000003156)	CBX2 (ENSTGUG00000003161)	RBFOX3 (ENSTGUG00000027162)	ENSTGUG00000003166	ENSTGUG00000019827	ENGASE (ENSTGUG00000003184) #7	C1QTNF1 (ENSTGUG00000003204) #8	CANT1 (ENSTGUG00000003205) #9	USP36 (ENSTGUG00000015811) #13	CYTH1 (ENSTGUG00000025105) #14	DNAH17 (ENSTGUG00000003207) #15	PGS1 (ENSTGUG00000003319) #16	SOCS3 (ENSTGUG00000003345) #17	ENSTGUG00000003348 #18	AFMID (ENSTGUG00000003351) #21	TK1 (ENSTGUG00000003364) #22	SYNGR2 (ENSTGUG00000024749) #24	TMC6 (ENSTGUG00000003385) #27	ENSTGUG00000003409	HGS (ENSTGUG00000003410)	MRPL12 (ENSTGUG00000026791)	SLC25A10 (ENSTGUG00000003450)	GCGR (ENSTGUG00000021801)	ENSTGUG00000029350	P4HB (ENSTGUG00000003472)	ARHGDIA (ENSTGUG00000003498)	ALYREF (ENSTGUG00000003513)	PCYT2 (ENSTGUG00000018159)	MAFG (ENSTGUG00000025880)	PYCR1 (ENSTGUG00000003568)	MYADML2 (ENSTGUG00000018944)
Medium ground finch	MODERN SPECIES	275		ENSGFOG00000009200	ENSGFOG00000009197	RBFOX3 (ENSGFOG00000009190)	ENGASE (ENSGFOG00000009183) #7	C1QTNF1 (ENSGFOG00000009175) #8	CANT1 (ENSGFOG00000009168) #9	TIMP2 (ENSGFOG00000009161) #12	USP36 (ENSGFOG00000009140) #13	CYTH1 (ENSGFOG00000008888) #14	DNAH17 (ENSGFOG00000008797) #15	PGS1 (ENSGFOG00000008783) #16	SOCS3 (ENSGFOG00000008780) #17	ENSGFOG00000008776	AFMID (ENSGFOG00000008770) #21	TK1 (ENSGFOG00000008764) #22	SYNGR2 (ENSGFOG00000008761) #24	TMC6 (ENSGFOG00000008723) #27	ARL16 (ENSGFOG00000008708)	HGS (ENSGFOG00000008697)	SLC25A10 (ENSGFOG00000008692)	GCGR (ENSGFOG00000008687)	PPP1R27 (ENSGFOG00000008676)	P4HB (ENSGFOG00000008177)	ARHGDIA (ENSGFOG00000008160)	ALYREF (ENSGFOG00000008154)	PCYT2 (ENSGFOG00000008139)	SIRT7 (ENSGFOG00000008132)	MAFG (ENSGFOG00000008127)	ENSGFOG00000008097	MYADML2 (ENSGFOG00000008092)
Great tit	MODERN SPECIES	8	CBX8 (ENSPMJG00000016634)	CBX2 (ENSPMJG00000016633)	ENPP7 (ENSPMJG00000016632)	RBFOX3 (ENSPMJG00000016631)	ENGASE (ENSPMJG00000016630) #7	C1QTNF1 (ENSPMJG00000016629) #8	CANT1 (ENSPMJG00000016628) #9	TIMP2 (ENSPMJG00000016627) #12	USP36 (ENSPMJG00000016626) #13	CYTH1 (ENSPMJG00000016625) #14	DNAH17 (ENSPMJG00000015278) #15	PGS1 (ENSPMJG00000015277) #16	SOCS3 (ENSPMJG00000015276) #17	ENSPMJG00000015274 #18	AFMID (ENSPMJG00000015273) #21	TK1 (ENSPMJG00000015272) #22	ENSPMJG00000015271	TMC6 (ENSPMJG00000015270) #27	ARL16 (ENSPMJG00000015269)	HGS (ENSPMJG00000015268)	MRPL12 (ENSPMJG00000015267)	SLC25A10 (ENSPMJG00000015266)	GCGR (ENSPMJG00000015265)	ENSPMJG00000015264	PPP1R27 (ENSPMJG00000015263)	P4HB (ENSPMJG00000015262)	ARHGDIA (ENSPMJG00000015261)	ALYREF (ENSPMJG00000015260)	ENSPMJG00000015258	PCYT2 (ENSPMJG00000015230)	SIRT7 (ENSPMJG00000015229)
Neognathae_c	ANCESTRAL SPECIES	23	ENSGT00940000158476	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.b.b #27	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT00940000158204.a	ENSGT00550000075065	ENSGT00940000159703
Kakapo	MODERN SPECIES	8	ENGASE (ENSSHBG00005015375) #7	C1QTNF1 (ENSSHBG00005015383) #8	CANT1 (ENSSHBG00005015387) #9	TIMP2 (ENSSHBG00005015391) #12	ENSSHBG00005015399 #13	ENSSHBG00005015406 #13	CYTH1 (ENSSHBG00005015413) #14	ENSSHBG00005015419 #15	ENSSHBG00005015424 #15	ENSSHBG00005015432 #15	ENSSHBG00005015438 #15	PGS1 (ENSSHBG00005015453) #16	SOCS3 (ENSSHBG00005015463) #17	ENSSHBG00005015465 #18	AFMID (ENSSHBG00005015471) #21	TK1 (ENSSHBG00005015476) #22	SYNGR2 (ENSSHBG00005015481) #24	TMC6 (ENSSHBG00005015490) #27	ARL16 (ENSSHBG00005015503)	HGS (ENSSHBG00005015512)	MRPL12 (ENSSHBG00005015519)	SLC25A10 (ENSSHBG00005015521)	GCGR (ENSSHBG00005015523)	MCRIP1 (ENSSHBG00005015533)	PPP1R27 (ENSSHBG00005015539)	P4HB (ENSSHBG00005015547)	ARHGDIA (ENSSHBG00005000712)	ALYREF (ENSSHBG00005011088)	ENSSHBG00005011107	PCYT2 (ENSSHBG00005011146)	SIRT7 (ENSSHBG00005011213)
Golden eagle	MODERN SPECIES	21	RBFOX3 (ENSACCG00020008185)	ENGASE (ENSACCG00020008216) #7	CANT1 (ENSACCG00020008244) #9	C1QTNF1 (ENSACCG00020008258) #8	TIMP2 (ENSACCG00020008271) #12	USP36 (ENSACCG00020008286) #13	CYTH1 (ENSACCG00020008315) #14	ENSACCG00020008340 ##15	ENSACCG00020000307 #15	ENSACCG00020000319 #15	ENSACCG00020000348 #15	PGS1 (ENSACCG00020000382) #16	SOCS3 (ENSACCG00020000394) #17	ENSACCG00020000418 #18	AFMID (ENSACCG00020000431) #21	TK1 (ENSACCG00020000470) #22	SYNGR2 (ENSACCG00020000492) #24	TMC6 (ENSACCG00020000550) #27	ARL16 (ENSACCG00020000592)	HGS (ENSACCG00020000637)	MRPL12 (ENSACCG00020000666)	SLC25A10 (ENSACCG00020000689)	GCGR (ENSACCG00020000726)	ENSACCG00020000750	PPP1R27 (ENSACCG00020000769)	P4HB (ENSACCG00020000794)	ARHGDIA (ENSACCG00020000821)	ALYREF (ENSACCG00020000850)	ENSACCG00020000870	PCYT2 (ENSACCG00020000884)	SIRT7 (ENSACCG00020000914)
African ostrich	MODERN SPECIES	398														ENSSCUG00000006207 #18	AFMID (ENSSCUG00000006211) #21	TK1 (ENSSCUG00000006213) #22	SYNGR2 (ENSSCUG00000006214) #24	ENSSCUG00000006217 #27	ENSSCUG00000006218	ARL16 (ENSSCUG00000006222)	HGS (ENSSCUG00000006223)	SLC25A10 (ENSSCUG00000006229)	PPP1R27 (ENSSCUG00000006233)	P4HB (ENSSCUG00000006235)	ARHGDIA (ENSSCUG00000006238)	PCYT2 (ENSSCUG00000006240)	SIRT7 (ENSSCUG00000006245)	MAFG (ENSSCUG00000006250)	ENSSCUG00000006253	MYADML2 (ENSSCUG00000006255)	NOTUM (ENSSCUG00000006259)
Cryptodira	ANCESTRAL SPECIES	21	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297
Testudinoidea	ANCESTRAL SPECIES	14	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.h #24	ENSGT00940000175759	ENSGT00950000182935.B.a.g #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b
Testudinidae	ANCESTRAL SPECIES	18	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.h #24	ENSGT00940000175759	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615
Abingdon island giant tortoise	MODERN SPECIES	2080		RBFOX3 (ENSCABG00000004011)	ENGASE (ENSCABG00000004008) #7	C1QTNF1 (ENSCABG00000004007) #8	CANT1 (ENSCABG00000004005) #9	TIMP2 (ENSCABG00000004003) #12	ENSCABG00000004002 #13	ENSCABG00000004000	CYTH1 (ENSCABG00000003972) #14	DNAH17 (ENSCABG00000003943) #15	PGS1 (ENSCABG00000003927) #16	SOCS3 (ENSCABG00000003921) #17	ENSCABG00000003910 #18	TMEM235 (ENSCABG00000003906) #19	AFMID (ENSCABG00000003903) #21	TK1 (ENSCABG00000003900) #22	SYNGR2 (ENSCABG00000003896) #24	ENSCABG00000003893	ENSCABG00000003891 #27	ENSCABG00000003888	ENSCABG00000003884	ARL16 (ENSCABG00000003881)	HGS (ENSCABG00000003876)	ENSCABG00000003874	MRPL12 (ENSCABG00000003873)	SLC25A10 (ENSCABG00000003866)	GCGR (ENSCABG00000003862)	MCRIP1 (ENSCABG00000003860)
Goode s thornscrub tortoise	MODERN SPECIES	6	ENSGEVG00005012975	ENSGEVG00005012996	RBFOX3 (ENSGEVG00005013054)	ENGASE (ENSGEVG00005013099) #7	C1QTNF1 (ENSGEVG00005013214) #8	CANT1 (ENSGEVG00005013260) #9	TIMP2 (ENSGEVG00005013280) #12	USP36 (ENSGEVG00005013368) #13	CYTH1 (ENSGEVG00005013496) #14	DNAH17 (ENSGEVG00005013684) #15	PGS1 (ENSGEVG00005014336) #16	SOCS3 (ENSGEVG00005014364) #17	ENSGEVG00005014383 #18	TMEM235 (ENSGEVG00005014425) #19	AFMID (ENSGEVG00005014547) #21	TK1 (ENSGEVG00005014575) #22	SYNGR2 (ENSGEVG00005014599) #24	TMC6 (ENSGEVG00005014627) #27	ARL16 (ENSGEVG00005014676)	HGS (ENSGEVG00005014712)	ENSGEVG00005014784	MRPL12 (ENSGEVG00005014817)	SLC25A10 (ENSGEVG00005014834)	GCGR (ENSGEVG00005014865)	MCRIP1 (ENSGEVG00005014977)	PPP1R27 (ENSGEVG00005015035)	P4HB (ENSGEVG00005015053)	ARHGDIA (ENSGEVG00005015089)	ALYREF (ENSGEVG00005015119)	ENSGEVG00005015146	ANAPC11 (ENSGEVG00005015171)
Emydidae	ANCESTRAL SPECIES	17	ENSGT00940000158816	ENSGT00940000159339	ENSGT00940000159924	ENSGT00390000018512 #7	ENSGT00940000161333 #8	ENSGT00390000012872 #9	ENSGT00940000158348 #12	ENSGT00940000157948.D #13	ENSGT00940000157519 #14	ENSGT00940000154076.C.c #15	ENSGT00390000002373 #16	ENSGT00940000159620.a #17	ENSGT00390000014681 #18	ENSGT00390000011615.A #19	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.g #24	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00730000111327	ENSGT00940000158297	ENSGT00390000010750.b	ENSGT00390000000190	ENSGT00940000156783	ENSGT00940000157969	ENSGT00940000161850	ENSGT00940000159603	ENSGT00940000157351	ENSGT00390000006233.c.b	ENSGT00410000025615	ENSGT01100000266789
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	608																ENSTMTG00000012464 #22
Three-toed box turtle	MODERN SPECIES	596																ENSTMTG00000012288 #22
painted turtle	MODERN SPECIES	696	CBX2 (ENSCPBG00000010890)	ENSCPBG00000010893	ENSCPBG00000010897	RBFOX3 (ENSCPBG00000010904)	ENGASE (ENSCPBG00000010920) #7	C1QTNF1 (ENSCPBG00000010942) #8	TIMP2 (ENSCPBG00000010949) #12	USP36 (ENSCPBG00000010951) #13	CYTH1 (ENSCPBG00000010964) #14	DNAH17 (ENSCPBG00000011116) #15	PGS1 (ENSCPBG00000011364) #16	SOCS3 (ENSCPBG00000011367) #17	ENSCPBG00000011372 #18	TMEM235 (ENSCPBG00000011373) #19	AFMID (ENSCPBG00000011375) #21	TK1 (ENSCPBG00000011378) #22	SYNGR2 (ENSCPBG00000011381) #24	TMC6 (ENSCPBG00000011384) #27	ENSCPBG00000011388	ARL16 (ENSCPBG00000011391)	HGS (ENSCPBG00000011393)	P4HB (ENSCPBG00000011401)	ENSCPBG00000011475	MRPL12 (ENSCPBG00000011476)	SLC25A10 (ENSCPBG00000011479)	GCGR (ENSCPBG00000011482)	MCRIP1 (ENSCPBG00000011486)	PPP1R27 (ENSCPBG00000011488)	ARHGDIA (ENSCPBG00000011492)	ANAPC11 (ENSCPBG00000011495)	NPB (ENSCPBG00000011498)
Chinese turtle	MODERN SPECIES	355														ENSPSIG00000001660	AFMID (ENSPSIG00000004243) #21	TK1 (ENSPSIG00000004051) #22	SYNGR2 (ENSPSIG00000003993) #24
Anura	ANCESTRAL SPECIES	358													ENSGT00940000178418	ENSGT01050000244894.b.b #27	ENSGT01050000244894.a.a.a.b #26	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24
Frog	MODERN SPECIES	1	tom1l1 (ENSXETG00000004317)	stxbp4 (ENSXETG00000027901)	tfap2c (ENSXETG00000004316)	mmd (ENSXETG00000004315)	ENSXETG00000043949	cdk5rap1 (ENSXETG00000004314)	ENSXETG00000036631	ENSXETG00000043677	tmem100 (ENSXETG00000041828)	ENSXETG00000045905	ANKFN1 (ENSXETG00000031668)	nog (ENSXETG00000043161)	ENSXETG00000047143	c17orf67 (ENSXETG00000030738)	dgke (ENSXETG00000001324)	tk1 (ENSXETG00000001323) #22	syngr2 (ENSXETG00000001322)	afmid (ENSXETG00000003006) #21	enpp7 (ENSXETG00000003004)	lrrc45 (ENSXETG00000003003)	CENPX (ENSXETG00000034703)	aspscr1 (ENSXETG00000003002)	notum (ENSXETG00000003001)	aatk (ENSXETG00000013407)	baiap2 (ENSXETG00000013408)	chmp6 (ENSXETG00000013409)	rptor (ENSXETG00000013410)	nptx1 (ENSXETG00000019618)	endov (ENSXETG00000019623)	lig3 (ENSXETG00000019634)	slc26a11 (ENSXETG00000019624)
Leishan spiny toad	MODERN SPECIES	3	ENSLLEG00000029476	ENSLLEG00000029462	ENSLLEG00000029449	ENSLLEG00000029436	ENSLLEG00000029418	C17orf75 (ENSLLEG00000029398)	ENSLLEG00000029374	RHBDL3 (ENSLLEG00000029338)	RHOT1 (ENSLLEG00000028927)	ENSLLEG00000028861	ENSLLEG00000028839	ENSLLEG00000028819	ENSLLEG00000028792	TMC6 (ENSLLEG00000028743) #27	ENSLLEG00000028697 #26	TK1 (ENSLLEG00000028620) #22	SYNGR2 (ENSLLEG00000028557) #24	AFMID (ENSLLEG00000028524) #21	ENSLLEG00000028464 #20	ENSLLEG00000028365 #18	SOCS3 (ENSLLEG00000028336) #17	PGS1 (ENSLLEG00000028288) #16	ABCA5 (ENSLLEG00000027915)	MAP2K6 (ENSLLEG00000027658)	ENSLLEG00000027618	ENSLLEG00000027592	ENSLLEG00000027580	ENSLLEG00000027534	ENSLLEG00000027503	MAP2K4 (ENSLLEG00000027302)	MYOCD (ENSLLEG00000027085)
Coelacanth	MODERN SPECIES	257	SGSH (ENSLACG00000017726)	SLC26A11 (ENSLACG00000017701)	TBCC (ENSLACG00000017658)	AFMID (ENSLACG00000017657) #21	BIRC5 (ENSLACG00000017642) #20	tha1 (ENSLACG00000017532) #18	SOCS3 (ENSLACG00000017308) #17	PGS1 (ENSLACG00000017175) #16	DNAH17 (ENSLACG00000016895) #15	CYTH1 (ENSLACG00000016837) #14	USP36 (ENSLACG00000016532) #13	TIMP2 (ENSLACG00000016404) #12	ENSLACG00000016358	CANT1 (ENSLACG00000016298) #9	C1QTNF1 (ENSLACG00000016236) #8	TK1 (ENSLACG00000016192) #22	SYNGR2 (ENSLACG00000016115) #24	TMC8 (ENSLACG00000015937) #26	TMC6 (ENSLACG00000015781) #27	ARL16 (ENSLACG00000015736)	ENSLACG00000015693	hgs (ENSLACG00000022379)	zgc:103625 (ENSLACG00000015617)	SLC25A10 (ENSLACG00000015479)	GCGR (ENSLACG00000014981)	ENSLACG00000014381	MCRIP1 (ENSLACG00000014317)	CSNK1D (ENSLACG00000014012)	SLC16A3 (ENSLACG00000013718)	ENSLACG00000022423	FASN (ENSLACG00000012857)
Actinopterygii	ANCESTRAL SPECIES	177	ENSGT00950000182960.a.b	ENSGT00950000183157.a.a.a	ENSGT00390000016682	ENSGT00510000047537 #20	ENSGT00390000011615.A #19	ENSGT00390000014681 #18	ENSGT00940000159620.b.a ##17	ENSGT00390000002373 #16	ENSGT00940000154076.C.c #15	ENSGT00940000157519 #14	ENSGT00940000157948.D #13	ENSGT00940000158348 #12	ENSGT00950000182983.A.a.b	ENSGT00390000012872 #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00390000001663
Reedfish	MODERN SPECIES	162											COG1 (ENSECRG00000019036)	afmid (ENSECRG00000018998) #21	cant1a (ENSECRG00000018982) #9	ENSECRG00000018960	ak2 (ENSECRG00000018939)	tk1 (ENSECRG00000018915) #22
Neopterygii	ANCESTRAL SPECIES	6	ENSGT00950000183157.a.a.a	ENSGT00390000016682	ENSGT00510000047537 #20	ENSGT00390000011615.A #19	ENSGT00390000014681 #18	ENSGT00940000159620.b.b ##17	ENSGT00940000159620.b.a ##17	ENSGT00390000002373 #16	ENSGT00940000154076.C.c #15	ENSGT00940000157519 #14	ENSGT00940000157948.D #13	ENSGT00940000158348 #12	ENSGT00950000182983.A.a.b	ENSGT00390000012872 #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00390000001663	ENSGT00390000002725	ENSGT00940000156853	ENSGT00390000015892	ENSGT00950000182933.A.a.a	ENSGT00950000183044.a.a.a.a	ENSGT00940000160070.b	ENSGT00940000159703	ENSGT00550000075065	ENSGT00940000164753	ENSGT00940000158204	ENSGT00390000013080
Spotted gar	MODERN SPECIES	648	ENSLOCG00000012791	fscn2b (ENSLOCG00000012788)	FAAP100 (ENSLOCG00000012780)	birc5a (ENSLOCG00000012776) #20	TMEM235 (ENSLOCG00000012771) #19	tha1 (ENSLOCG00000012764) #18	socs3b (ENSLOCG00000017758) ##17	PGS1 (ENSLOCG00000012756) #16	DNAH17 (ENSLOCG00000012734) #15	cyth1b (ENSLOCG00000012720) #14	usp36 (ENSLOCG00000012710) #13	timp2b (ENSLOCG00000012706) #12	ENSLOCG00000012700	cant1a (ENSLOCG00000012695) #9	afmid (ENSLOCG00000012683) #21	tk1 (ENSLOCG00000012676) #22	syngr2b (ENSLOCG00000012670) #24	ENSLOCG00000012664	ENSLOCG00000012659	TMC8 (ENSLOCG00000012647) #26	TMC6 (ENSLOCG00000012634) #27	ENSLOCG00000012626	ENSLOCG00000012620	ENSLOCG00000012613	ASPSCR1 (ENSLOCG00000012603)	notum1a (ENSLOCG00000012591)	MYADML2 (ENSLOCG00000017757)	PYCR1 (ENSLOCG00000012583)	mafgb (ENSLOCG00000012579)	ENSLOCG00000012576	SIRT7 (ENSLOCG00000012572)
Osteoglossocephalai	ANCESTRAL SPECIES	145															ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b	ENSGT00940000168750	ENSGT00940000155830	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	181	ENSGT00980000198917	ENSGT00390000015076	ENSGT00520000061927	ENSGT00940000159369	ENSGT00940000160116.a	ENSGT00950000183157.a.a.a.c	ENSGT00390000016682	ENSGT00510000047537 #20	ENSGT00390000011615.A.b #19	ENSGT00390000002373 #16	ENSGT00940000157519.b.a #14	ENSGT00940000157948.D #13	ENSGT00940000158348.e.a #12	ENSGT00940000164412.b	ENSGT00390000012872.c #9	ENSGT00390000011309.m #22	ENSGT00950000182935.B.a.d #24	ENSGT01050000244894.b.b.b #27
P. kingsleyae	MODERN SPECIES	710												usp36 (ENSPKIG00000007858) #13	timp2a (ENSPKIG00000007833) #12	lgals3bp.2 (ENSPKIG00000007816)	CANT1 (ENSPKIG00000007798) #9	tk1 (ENSPKIG00000007773) #22	SYNGR2 (ENSPKIG00000007758) #24	ENSPKIG00000007741
Osteoglossiformes	ANCESTRAL SPECIES	59	ENSGT00940000165634.a.a	ENSGT00940000163891	ENSGT00940000165634.b	ENSGT00410000026495.C.b	ENSGT00390000018731.e	ENSGT00940000160874	ENSGT00390000013260.B	ENSGT00390000003596	ENSGT00950000182961.a.a.e	ENSGT00940000160948	ENSGT00950000182983.A.a.a.b	ENSGT00390000007726.a.a.j	ENSGT00950000183137.a	ENSGT00390000012872.d #9	ENSGT00390000011093 #21	ENSGT00390000011309.n #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b.i	ENSGT00940000160070.a.a	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.e
Asian bonytongue	MODERN SPECIES		cep131 (ENSSFOG00015018677)	ENSSFOG00015018800	ENSSFOG00015018844	ENSSFOG00015018851	nploc4 (ENSSFOG00015018873)	TSPAN10 (ENSSFOG00015018939)	pde6gb (ENSSFOG00015013319)	OXLD1 (ENSSFOG00015031794)	gprc5c (ENSSFOG00015030151)	GPR142 (ENSSFOG00015033178)	BTBD17 (ENSSFOG00015026095)	oga (ENSSFOG00015019170)	ENSSFOG00015019225	CANT1 (ENSSFOG00015030282) #9	afmid (ENSSFOG00015019253) #21	tk1 (ENSSFOG00015019275) #22	syngr2b (ENSSFOG00015029541) #24	ENSSFOG00015019315	ENSSFOG00015019324	RNPS1 (ENSSFOG00015019341)	cox19 (ENSSFOG00015025123)	ENSSFOG00015019370	RAB26 (ENSSFOG00015030351)	LMF1 (ENSSFOG00015019430)	sox8a (ENSSFOG00015031492)	PEMT (ENSSFOG00015029058)	rasd1 (ENSSFOG00015026067)	NT5M (ENSSFOG00015028754)	COPS3 (ENSSFOG00015020445)	usp22 (ENSSFOG00015020459)	ENSSFOG00015031120
P. kingsleyae	MODERN SPECIES	159	ENSPKIG00000011426	ENSPKIG00000011386	cep131 (ENSPKIG00000011200)	ENSPKIG00000010993	ENSPKIG00000010917	nploc4 (ENSPKIG00000010886)	TSPAN10 (ENSPKIG00000010865)	PDE6H (ENSPKIG00000010851)	OXLD1 (ENSPKIG00000010837)	gprc5c (ENSPKIG00000010810)	GPR142 (ENSPKIG00000010784)	oga (ENSPKIG00000010731)	ENSPKIG00000010691	CANT1 (ENSPKIG00000010656) #9	afmid (ENSPKIG00000010623) #21	TK1 (ENSPKIG00000010585) #22	syngr2b (ENSPKIG00000010554) #24	TMC8 (ENSPKIG00000010517) #26	ENSPKIG00000010491 #27	ENSPKIG00000010468 #27	NOTUM (ENSPKIG00000010411)	aspscr1 (ENSPKIG00000010341)	ENSPKIG00000010323	ENSPKIG00000010280	MAFG (ENSPKIG00000010251)	ENSPKIG00000010243	ENSPKIG00000010213	SIRT7 (ENSPKIG00000010175)	pcyt2 (ENSPKIG00000010134)	gnav1 (ENSPKIG00000010103)	npb (ENSPKIG00000010078)
Clupeocephala	ANCESTRAL SPECIES	97	ENSGT00940000154965.A	ENSGT00940000170319	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454	ENSGT00390000002223	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Otomorpha	ANCESTRAL SPECIES	55	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454	ENSGT00390000002223	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00940000160070.b.a.b	ENSGT00940000168750	ENSGT00940000155830.e.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039.a
Otophysi	ANCESTRAL SPECIES	230									ENSGT00390000018807	ENSGT00390000015228	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00940000160070.b.a.b	ENSGT00940000168750	ENSGT00940000155830.e.b	ENSGT00390000004090	ENSGT00390000003873	ENSGT00390000005666
Characiphysae	ANCESTRAL SPECIES	8	ENSGT00390000011249	ENSGT00390000011698.c.a.b	ENSGT00940000160591.a.a	ENSGT00940000166218	ENSGT00950000183095.a.b.a.b.b.a	ENSGT01100000263524.G.f.b	ENSGT00940000155037	ENSGT00390000016988.a.a.a.a.b	ENSGT00390000018807	ENSGT00390000015228	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00940000160070.b.a.b	ENSGT00390000004090	ENSGT00390000003873	ENSGT00390000013727.d.a	ENSGT01000000214413.b.a.a.q.a	ENSGT00940000155212.ab.a	ENSGT00390000005717.s
Channel catfish	MODERN SPECIES	1	ENSIPUG00000021929	irf2bp2 (ENSIPUG00000021926)	map1lc3c (ENSIPUG00000021896)	STRN (ENSIPUG00000021850)	opn6a (ENSIPUG00000021834)	eif4a3 (ENSIPUG00000021785)	rpl37a (ENSIPUG00000021767)	pfkl (ENSIPUG00000021701)	c10h21orf2 (ENSIPUG00000021692)	orc2 (ENSIPUG00000021681)	ldb1b (ENSIPUG00000021664)	si:dkey-93h22.8 (ENSIPUG00000021651)	ENSIPUG00000021621	cant1 (ENSIPUG00000021609) #9	afmid (ENSIPUG00000021582) #21	tk1 (ENSIPUG00000021545) #22	syngr2b (ENSIPUG00000021531) #24	ENSIPUG00000021525	tmc8 (ENSIPUG00000021499) #26	tmc6 (ENSIPUG00000021463) #27	notum (ENSIPUG00000021448)	aspscr1 (ENSIPUG00000021419)	ENSIPUG00000021416	pycr1 (ENSIPUG00000021406)	MAFG (ENSIPUG00000021402)	ENSIPUG00000021381	trappc10 (ENSIPUG00000021347)	mfn1b (ENSIPUG00000021322)	gnb4b (ENSIPUG00000021291)	SHROOM2 (ENSIPUG00000021273)	ENSIPUG00000021270
Characiphysae_b	ANCESTRAL SPECIES	4	ENSGT00390000011249	ENSGT00390000011698.c.a.b	ENSGT00940000160591.a.a	ENSGT00940000166218	ENSGT00950000183095.a.b.a.b.b.a	ENSGT01100000263524.G.f.b	ENSGT00940000155037	ENSGT00390000016988.a.a.a.a.b	ENSGT00390000018807	ENSGT00390000015228	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00940000160070.b.a.b	ENSGT00390000004090	ENSGT00390000003873	ENSGT00390000013727.d.a	ENSGT01000000214413.b.a.a.q.a	ENSGT00940000155212.ab.a	ENSGT00390000005717.s
Characoidei	ANCESTRAL SPECIES	18	ENSGT00390000011249	ENSGT00390000011698.c.a.b	ENSGT00940000160591.a.a	ENSGT00940000166218	ENSGT00950000183095.a.b.a.b.b.a	ENSGT01100000263524.G.f.b	ENSGT00940000155037	ENSGT00390000016988.a.a.a.a.b	ENSGT00390000018807	ENSGT00390000015228	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00940000160070.b.a.b	ENSGT00390000004090	ENSGT00390000003873	ENSGT00390000013727.d.a	ENSGT01000000214413.b.a.a.q.a	ENSGT00940000155212.ab.a	ENSGT00390000005717.s
Red-bellied piranha	MODERN SPECIES	997												si:dkey-93h22.8 (ENSPNAG00000023094)	ENSPNAG00000023078	cant1b (ENSPNAG00000022980) #9	afmid (ENSPNAG00000004716) #21	tk1 (ENSPNAG00000022951) #22	syngr2b (ENSPNAG00000022917) #24	TMC8 (ENSPNAG00000005666) #26	ENSPNAG00000022885 #27	ENSPNAG00000003744 #27
Mexicana tetra	MODERN SPECIES	20	ENSAMXG00000040813	map1lc3c (ENSAMXG00000043525)	strn (ENSAMXG00000021069)	ENSAMXG00000035494	opn6a (ENSAMXG00000020921)	eif4a3 (ENSAMXG00000020882)	zgc:171772 (ENSAMXG00000041482)	pfklb (ENSAMXG00000020865)	CFAP410 (ENSAMXG00000034889)	ENSAMXG00000020816	ldb1b (ENSAMXG00000012067)	si:dkey-93h22.8 (ENSAMXG00000020783)	ENSAMXG00000029086	cant1b (ENSAMXG00000043529) #9	afmid (ENSAMXG00000039072) #21	tk1 (ENSAMXG00000020703) #22	syngr2b (ENSAMXG00000037996) #24	ENSAMXG00000031343	TMC8 (ENSAMXG00000020582) #26	TMC6 (ENSAMXG00000020529) #27	NOTUM (ENSAMXG00000020491)	aspscr1 (ENSAMXG00000020425)	ENSAMXG00000025273	pycr1b (ENSAMXG00000040337)	mafgb (ENSAMXG00000020381)	ENSAMXG00000020370	TRAPPC10 (ENSAMXG00000020247)	mfn1b (ENSAMXG00000020170)	gnb4b (ENSAMXG00000037814)	SHROOM2 (ENSAMXG00000042977)	ENSAMXG00000025757
Electric eel	MODERN SPECIES	762									pfklb (ENSEEEG00000021830)	ENSEEEG00000021815	ORC2 (ENSEEEG00000021798)	ldb1b (ENSEEEG00000021792)	ENSEEEG00000021789	cant1b (ENSEEEG00000021788) #9	afmid (ENSEEEG00000021787) #21	tk1 (ENSEEEG00000021784) #22	syngr2b (ENSEEEG00000021783) #24	ENSEEEG00000021779	TMC8 (ENSEEEG00000021775) #26	TMC6 (ENSEEEG00000021714) #27	ENSEEEG00000021711	aspscr1 (ENSEEEG00000021708)	ENSEEEG00000021706	pycr1b (ENSEEEG00000021691)
Cyprinoidei	ANCESTRAL SPECIES	27	ENSGT00390000011698.c.a.b	ENSGT00940000160591.a.a	ENSGT00940000166218	ENSGT00950000183095.a.b.a.b.b.a	ENSGT01100000263524.G.f.b	ENSGT00940000155037	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000159292.v	ENSGT00390000018807	ENSGT00390000015228	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00940000160070.b.a.b	ENSGT00390000004090.dd.a	ENSGT00390000003873	ENSGT00730000110872.b.cb	ENSGT00950000182928.B.d.b	ENSGT00940000156634.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	993												ENSGT00390000005639.a.b.d.b.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b.b #9	ENSGT00390000011309.o #22
Cyprininae_a	ANCESTRAL SPECIES	498														ENSGT00390000007726.a.b	ENSGT00390000012872.b.b #9	ENSGT00390000011309.o #22	ENSGT00950000182935.B.a.c.b #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b.j #26	ENSGT01050000244894.b.b.d.a.d #27	ENSGT00940000156853.q.a	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.a.a.a	ENSGT00940000160070.b.a.b	ENSGT00390000004090.dd.a	ENSGT00390000003873	ENSGT00730000110872.b.cb.b	ENSGT00950000182928.B.d.b.o.b.a
Golden-line barbel	MODERN SPECIES	1172							irf2bp2b (ENSSGRG00000034425)	ENSSGRG00000034421	strn (ENSSGRG00000034415)	opn6a (ENSSGRG00000034411)	zgc:171772 (ENSSGRG00000034408)	ldb1b (ENSSGRG00000034351)	si:dkey-93h22.8 (ENSSGRG00000034350)	ENSSGRG00000034349	cant1b (ENSSGRG00000034348) #9	tk1 (ENSSGRG00000034324) #22	syngr2b (ENSSGRG00000034319) #24
Common carp reference	MODERN SPECIES	42	ENSCCRG00000063152	ENSCCRG00000069883	ENSCCRG00000002529	tbce (ENSCCRG00000067190)	tomm20b (ENSCCRG00000024546)	irf2bp2b (ENSCCRG00000075369)	map1lc3c (ENSCCRG00000066718)	strn (ENSCCRG00000063952)	eif4a3 (ENSCCRG00000021882)	ENSCCRG00000021891	ENSCCRG00000021896	ldb1b (ENSCCRG00000001723)	si:dkey-93h22.8 (ENSCCRG00000074641)	ENSCCRG00000007932	cant1b (ENSCCRG00000015933) #9	tk1 (ENSCCRG00000047295) #22	syngr2b (ENSCCRG00000036364) #24	ENSCCRG00000073842	TMC8 (ENSCCRG00000072909) #26	TMC6 (ENSCCRG00000051089) #27	aspscr1 (ENSCCRG00000065331)	pycr1b (ENSCCRG00000054963)	mafgb (ENSCCRG00000066606)	ENSCCRG00000007058	ENSCCRG00000076299	srsf11 (ENSCCRG00000022067)	ankrd13c (ENSCCRG00000053419)	plaat1 (ENSCCRG00000059745)	sos1 (ENSCCRG00000027809)	ENSCCRG00000068712	ENSCCRG00000055643
Cyprininae	ANCESTRAL SPECIES	402														ENSGT00390000012872.b.a #9	ENSGT00390000011093 #21	ENSGT00390000011309.p #22	ENSGT00950000182935.B.a.c.b #24	ENSGT01050000244894.a.a.a.b.j #26	ENSGT01050000244894.b.b.d.a.d #27	ENSGT00940000156853.q.b	ENSGT00530000069282.B	ENSGT00950000182935.B.a.c.a #24	ENSGT01050000244894.a.a.a.b.i #26	ENSGT01050000244894.b.b.d.a.c #27	ENSGT00390000015892.a	ENSGT00940000156853.r	ENSGT00940000156853.q.a	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.a.a	ENSGT00940000160070.b.a.b	ENSGT00390000004090.dd.a
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	29	ankrd13c (ENSCARG00000008306)	srsf11 (ENSCARG00000008296)	ENSCARG00000008284	mafgb (ENSCARG00000008276)	pycr1b (ENSCARG00000008261)	aspscr1 (ENSCARG00000008242)	TMC6 (ENSCARG00000008227) #27	syngr2b (ENSCARG00000008195) #24	tk1 (ENSCARG00000008098) #22	ENSCARG00000008076	ENSCARG00000008059	ldb1b (ENSCARG00000007998)	ENSCARG00000007975	cant1b (ENSCARG00000007965) #9	cant1b (ENSCARG00000007957) #9	tk1 (ENSCARG00000007951) #22	syngr2b (ENSCARG00000007944) #24	TMC8 (ENSCARG00000007930) #26	ENSCARG00000007924 #27	slc45a3 (ENSCARG00000007915)	ENSCARG00000007913	mfsd4aa (ENSCARG00000007873)	elk4 (ENSCARG00000007854)	CDK18 (ENSCARG00000007139)	hp1bp3 (ENSCARG00000007017)	sh2d5 (ENSCARG00000006999)	zgc:158258 (ENSCARG00000006994)	tnfrsf1b (ENSCARG00000006957)	trim62.1 (ENSCARG00000006942)	znf362a (ENSCARG00000006934)	EMP3 (ENSCARG00000006930)
Goldfish	MODERN SPECIES	29	CDK18 (ENSCARG00000007139)	elk4 (ENSCARG00000007854)	mfsd4aa (ENSCARG00000007873)	ENSCARG00000007913	slc45a3 (ENSCARG00000007915)	ENSCARG00000007924 #27	TMC8 (ENSCARG00000007930) #26	syngr2b (ENSCARG00000007944) #24	tk1 (ENSCARG00000007951) #22	cant1b (ENSCARG00000007957) #9	cant1b (ENSCARG00000007965) #9	ENSCARG00000007975	ldb1b (ENSCARG00000007998)	ENSCARG00000008059	ENSCARG00000008076	tk1 (ENSCARG00000008098) #22	syngr2b (ENSCARG00000008195) #24	TMC6 (ENSCARG00000008227) #27	aspscr1 (ENSCARG00000008242)	pycr1b (ENSCARG00000008261)	mafgb (ENSCARG00000008276)	ENSCARG00000008284	srsf11 (ENSCARG00000008296)	ankrd13c (ENSCARG00000008306)	plaat1 (ENSCARG00000008320)	GEMIN6 (ENSCARG00000008335)	ENSCARG00000008339	HNRNPLL (ENSCARG00000008353)	pfklb (ENSCARG00000008416)	zgc:171772 (ENSCARG00000009165)	eif4a3 (ENSCARG00000009191)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2	srsf11 (ENSCARG00000010858)	ankrd13c (ENSCARG00000010823)	ORC2 (ENSCARG00000010474)	CFAP410 (ENSCARG00000010452)	pfklb (ENSCARG00000009473)	ENSCARG00000009390	eif4a3 (ENSCARG00000009233)	opn6a (ENSCARG00000009217)	strn (ENSCARG00000008045)	sos1 (ENSCARG00000004994)	rfc4 (ENSCARG00000004810)	ldb1b (ENSCARG00000004487)	ENSCARG00000004412	cant1b (ENSCARG00000004397) #9	afmid (ENSCARG00000004378) #21	tk1 (ENSCARG00000004327) #22	syngr2b (ENSCARG00000004315) #24	ENSCARG00000004304	TMC8 (ENSCARG00000004260) #26	TMC6 (ENSCARG00000004219) #27	NOTUM (ENSCARG00000003858)	aspscr1 (ENSCARG00000003726)	ENSCARG00000003689	pycr1b (ENSCARG00000003650)	mafgb (ENSCARG00000003636)	TRAPPC10 (ENSCARG00000003622)	srsf11 (ENSCARG00000003612)	ankrd13c (ENSCARG00000003604)	ORC2 (ENSCARG00000003597)	ENSCARG00000003586	pfklb (ENSCARG00000003509)
Goldfish	MODERN SPECIES	2	CFAP410 (ENSCARG00000010452)	ORC2 (ENSCARG00000010474)	ankrd13c (ENSCARG00000010823)	srsf11 (ENSCARG00000010858)	TRAPPC10 (ENSCARG00000010871)	GEMIN6 (ENSCARG00000010891)	srsf7b (ENSCARG00000010916)	HNRNPLL (ENSCARG00000010964)	ENSCARG00000011016	ENSCARG00000011023 #26	ENSCARG00000011046 #27	sos1 (ENSCARG00000011053)	cant1b (ENSCARG00000011081) #9	afmid (ENSCARG00000011089) #21	ENSCARG00000011122	tk1 (ENSCARG00000011128) #22	syngr2b (ENSCARG00000011146) #24	ENSCARG00000011150	ENSCARG00000011165 #26
Cyprininae_a	ANCESTRAL SPECIES	348	ENSGT00940000166218.d	ENSGT00950000183095.a.b.a.b.b.a.a	ENSGT01100000263524.G.f.b	ENSGT00940000155037	ENSGT00390000016988.a.a.a.a.b	ENSGT01100000263476.E.b.a.a.a.a.b.b	ENSGT00940000159292.v.b	ENSGT00390000018807	ENSGT00390000015228	ENSGT00390000005639.a.b.d.b.a.a	ENSGT01000000219139	ENSGT00390000005639.a.b.d.b.b	ENSGT00950000183137.a.l	ENSGT00390000012872.b.a #9	ENSGT00390000011093 #21	ENSGT00390000011309.p #22	ENSGT00950000182935.B.a.c.a #24	ENSGT01050000244894.a.a.a.b.i #26	ENSGT01050000244894.b.b.d.a.c #27	ENSGT00390000015892.a	ENSGT00940000156853.r
Common carp reference	MODERN SPECIES	13	tomm20b (ENSCCRG00000061925)	irf2bp2b (ENSCCRG00000072833)	map1lc3c (ENSCCRG00000066841)	strn (ENSCCRG00000044182)	opn6a (ENSCCRG00000075563)	eif4a3 (ENSCCRG00000021863)	zgc:171772 (ENSCCRG00000010731)	ENSCCRG00000010733	ENSCCRG00000047598	pfklb (ENSCCRG00000031972)	ENSCCRG00000031895	ENSCCRG00000045296	ENSCCRG00000067968	ldb1b (ENSCCRG00000075309)	ENSCCRG00000038287 #9	tk1 (ENSCCRG00000036374) #22	ENSCCRG00000036411 #21	ENSCCRG00000057342	ENSCCRG00000039806 #26	ENSCCRG00000049618 #27	ENSCCRG00000007086	aspscr1 (ENSCCRG00000007078)	ENSCCRG00000053033	pycr1b (ENSCCRG00000075302)	mafgb (ENSCCRG00000071085)	srsf11 (ENSCCRG00000079275)	ENSCCRG00000007021	ankrd13c (ENSCCRG00000022083)	rfc4 (ENSCCRG00000067369)	sos1 (ENSCCRG00000037840)	srsf7b (ENSCCRG00000066152)
Golden-line barbel	MODERN SPECIES	3250																tk1 (ENSSGRG00000005603) #22
Zebrafish	MODERN SPECIES	2	tomm20b (ENSDARG00000103566)	irf2bp2b (ENSDARG00000098635)	map1lc3c (ENSDARG00000100528)	strn (ENSDARG00000100011)	opn6a (ENSDARG00000102430)	eif4a3 (ENSDARG00000102978)	zgc:171772 (ENSDARG00000115271)	pfklb (ENSDARG00000099755)	CFAP410 (ENSDARG00000099397)	ENSDARG00000101465	ldb1b (ENSDARG00000103158)	si:dkey-93h22.8 (ENSDARG00000098666)	ENSDARG00000103266	cant1b (ENSDARG00000102977) #9	afmid (ENSDARG00000099106) #21	tk1 (ENSDARG00000102245) #22	syngr2b (ENSDARG00000104470) #24	ENSDARG00000099600	ENSDARG00000101146	TMC8 (ENSDARG00000101050) #26	ENSDARG00000004875	notum1b (ENSDARG00000117145)	aspscr1 (ENSDARG00000105321)	pycr1b (ENSDARG00000098639)	mafgb (ENSDARG00000100097)	ENSDARG00000101309	TRAPPC10 (ENSDARG00000098118)	srsf11 (ENSDARG00000098574)	ankrd13c (ENSDARG00000103831)	plaat1 (ENSDARG00000100021)	rfc4 (ENSDARG00000042458)
Clupeiformes	ANCESTRAL SPECIES	8	ENSGT00940000162611.a.a.b	ENSGT00940000154965.A	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00390000008454	ENSGT00390000002223	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24
Atlantic herring	MODERN SPECIES	10	dazl (ENSCHAG00000016954)	ENSCHAG00000016972	oxnad1 (ENSCHAG00000017000)	ENSCHAG00000017009	ENSCHAG00000017052	polr1h (ENSCHAG00000017073)	ddx39b (ENSCHAG00000017091)	mgat1b (ENSCHAG00000017409)	gtf2h4 (ENSCHAG00000017497)	SH3BP5L (ENSCHAG00000017638)	ENSCHAG00000017687	tnfa (ENSCHAG00000019362)	atat1 (ENSCHAG00000019370)	ENSCHAG00000019398	bag6l (ENSCHAG00000019410)	tk1 (ENSCHAG00000019543) #22	ENSCHAG00000019559	tpm3 (ENSCHAG00000019585)	arhgef1a (ENSCHAG00000020039)	ENSCHAG00000020518	ENSCHAG00000020556	ssr2 (ENSCHAG00000020588)	mbl2 (ENSCHAG00000020633)	ENSCHAG00000020661	ssr2 (ENSCHAG00000020689)	GRB10 (ENSCHAG00000020733)	ENSCHAG00000021164	ENSCHAG00000021188	ENSCHAG00000021329	ENSCHAG00000000595	ENSCHAG00000000927
Denticle herring	MODERN SPECIES	13	ENSDCDG00000002139	ENSDCDG00000002133	hoga1 (ENSDCDG00000002126)	MORN4 (ENSDCDG00000002121)	ENSDCDG00000002115	ENSDCDG00000002106	slit1b (ENSDCDG00000001399)	ARHGAP19 (ENSDCDG00000001323)	KCNIP2 (ENSDCDG00000001316)	armh3 (ENSDCDG00000001301)	ldb1b (ENSDCDG00000001084)	si:dkey-93h22.8 (ENSDCDG00000001043)	ENSDCDG00000001004	cant1b (ENSDCDG00000000981) #9	afmid (ENSDCDG00000000971) #21	tk1 (ENSDCDG00000000962) #22	syngr2b (ENSDCDG00000000953) #24	SIRT7 (ENSDCDG00000000939)	ENSDCDG00000000924	mafgb (ENSDCDG00000000914)	pycr1b (ENSDCDG00000000900)	ENSDCDG00000000895	aspscr1 (ENSDCDG00000000885)	NOTUM (ENSDCDG00000000857)	TMC6 (ENSDCDG00000000838) #27	ENSDCDG00000000828 #26	ENSDCDG00000000823	pcyt2 (ENSDCDG00000000778)	gnav1 (ENSDCDG00000000744)	npb (ENSDCDG00000000741)	sgsh (ENSDCDG00000000736)
Euteleosteomorpha	ANCESTRAL SPECIES	68	ENSGT00940000157322.b.a	ENSGT00940000157331.b.b	ENSGT01100000263518.A.b	ENSGT00940000164383	ENSGT00940000179277	ENSGT00940000157145	ENSGT00390000008454	ENSGT00390000002223	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Acanthomorphata	ANCESTRAL SPECIES	95	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Percomorphaceae	ANCESTRAL SPECIES	20	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Tiger tail seahorse	MODERN SPECIES	382	SMAP1 (ENSHCOG00000015623)	krt94 (ENSHCOG00000015619)	krt98 (ENSHCOG00000015617)	krt15 (ENSHCOG00000015609)	krt99 (ENSHCOG00000015602)	ENSHCOG00000000435	ENSHCOG00000015579	jupa (ENSHCOG00000015466)	KCNIP2 (ENSHCOG00000015439)	armh3 (ENSHCOG00000015410)	ldb1b (ENSHCOG00000015353)	ENSHCOG00000015325	ENSHCOG00000015318	cant1b (ENSHCOG00000015276) #9	afmid (ENSHCOG00000015242) #21	tk1 (ENSHCOG00000015236) #22	syngr2b (ENSHCOG00000015227) #24	TMC8 (ENSHCOG00000015222) #26	TMC6 (ENSHCOG00000015176) #27	aspscr1 (ENSHCOG00000015163)	ENSHCOG00000015097	ENSHCOG00000015090	MAFG (ENSHCOG00000015051)	ENSHCOG00000015027	SIRT7 (ENSHCOG00000015014)	pcyt2 (ENSHCOG00000014983)	gnav1 (ENSHCOG00000014948)	npb (ENSHCOG00000014919)	sgsh (ENSHCOG00000014883)	slc26a11 (ENSHCOG00000014873)	ENSHCOG00000014825
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Ovalentaria	ANCESTRAL SPECIES		ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Atherinomorphae	ANCESTRAL SPECIES	23	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Cyprinodontiformes	ANCESTRAL SPECIES	24	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Aplocheiloidei	ANCESTRAL SPECIES	31	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080	ENSGT01070000253775.b
Mangrove rivulus	MODERN SPECIES	38	SMAP1 (ENSKMAG00000020892)	krt94 (ENSKMAG00000020377)	krt98 (ENSKMAG00000020226)	krt15 (ENSKMAG00000020200)	krt99 (ENSKMAG00000020185)	ENSKMAG00000020171	ENSKMAG00000020079	jupa (ENSKMAG00000020020)	KCNIP2 (ENSKMAG00000019986)	armh3 (ENSKMAG00000019917)	ldb1b (ENSKMAG00000019878)	si:dkey-93h22.8 (ENSKMAG00000019855)	ENSKMAG00000019823	cant1b (ENSKMAG00000019804) #9	afmid (ENSKMAG00000019775) #21	tk1 (ENSKMAG00000019744) #22	syngr2b (ENSKMAG00000019727) #24	ENSKMAG00000019320	TMC8 (ENSKMAG00000019198) #26	TMC6 (ENSKMAG00000019155) #27	NOTUM (ENSKMAG00000019123)	aspscr1 (ENSKMAG00000019094)	ENSKMAG00000019081	ENSKMAG00000019045	MAFG (ENSKMAG00000019014)	SIRT7 (ENSKMAG00000018989)	pcyt2 (ENSKMAG00000018932)	gnav1 (ENSKMAG00000018901)	npb (ENSKMAG00000018891)	sgsh (ENSKMAG00000018856)	slc26a11 (ENSKMAG00000018831)
Turquoise killifish	MODERN SPECIES	1611	ENSNFUG00015000705	krt98 (ENSNFUG00015000712)	krt98 (ENSNFUG00015000761)	krt15 (ENSNFUG00015000834)	krt99 (ENSNFUG00015000839)	ENSNFUG00015000845	ENSNFUG00015000872	jupa (ENSNFUG00015001005)	KCNIP2 (ENSNFUG00015001093)	armh3 (ENSNFUG00015001107)	LDB1 (ENSNFUG00015001141)	PPRC1 (ENSNFUG00015001224)	ENSNFUG00015001227	CANT1 (ENSNFUG00015001232) #9	AFMID (ENSNFUG00015001242) #21	tk1 (ENSNFUG00015001270) #22	SYNGR2 (ENSNFUG00015001286) #24	ENSNFUG00015001295	TMC6 (ENSNFUG00015001312) #27	aspscr1 (ENSNFUG00015001365)	ENSNFUG00015001375	OLA.16066 (ENSNFUG00015001395)	ENSNFUG00015001413	MAFG (ENSNFUG00015001418)	ENSNFUG00015001424	ENSNFUG00015001431	SIRT7 (ENSNFUG00015001435)	NPB (ENSNFUG00015001460)	SGSH (ENSNFUG00015001466)	slc26a11 (ENSNFUG00015001490)	MRI1 (ENSNFUG00015001505)
Cyprinodontoidei	ANCESTRAL SPECIES	15	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a.g	ENSGT00950000182969.B.c.a.a.a.h	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Poecilia	ANCESTRAL SPECIES	6	ENSGT00950000182969.B.c.a.a.a.g	ENSGT00950000182969.B.c.a.a.a.h	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00950000183052.b.c.b.b.a.a.a.b.c.a.a.c	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b.b	ENSGT00940000164753.b.a	ENSGT00940000158204.d
NAME_6	ANCESTRAL SPECIES	96										ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b.b	ENSGT00940000164753.b.a	ENSGT00940000158204.d
Amazon molly	MODERN SPECIES	506										armh3 (ENSPFOG00000000800)	ldb1b (ENSPFOG00000001150)	si:dkey-93h22.8 (ENSPFOG00000001320)	ENSPFOG00000001376	cant1b (ENSPFOG00000001512) #9	afmid (ENSPFOG00000001639) #21	tk1 (ENSPFOG00000001761) #22	syngr2b (ENSPFOG00000024151) #24	ENSPFOG00000024276	TMC8 (ENSPFOG00000001925) #26	TMC6 (ENSPFOG00000002182) #27	NOTUM (ENSPFOG00000002456)	aspscr1 (ENSPFOG00000002615)	ENSPFOG00000021992	ENSPFOG00000002863	MAFG (ENSPFOG00000002983)	ENSPFOG00000022440	SIRT7 (ENSPFOG00000003047)	pcyt2 (ENSPFOG00000022675)	gnav1 (ENSPFOG00000003322)	npb (ENSPFOG00000020122)	sgsh (ENSPFOG00000003433)
Sailfin molly	MODERN SPECIES	448										armh3 (ENSPLAG00000001809)	ldb1b (ENSPLAG00000001779)	si:dkey-93h22.8 (ENSPLAG00000001769)	ENSPLAG00000001755	cant1b (ENSPLAG00000001726) #9	afmid (ENSPLAG00000001712) #21	tk1 (ENSPLAG00000000687) #22	syngr2b (ENSPLAG00000001696) #24	TMC8 (ENSPLAG00000001684) #26	TMC6 (ENSPLAG00000001666) #27	NOTUM (ENSPLAG00000001652)	aspscr1 (ENSPLAG00000001645)	ENSPLAG00000001639	ENSPLAG00000001634	MAFG (ENSPLAG00000001625)	ENSPLAG00000001617	SIRT7 (ENSPLAG00000001609)	pcyt2 (ENSPLAG00000001602)
Guppy	MODERN SPECIES	439	krt98 (ENSPREG00000000457)	krt15 (ENSPREG00000000456)	krt99 (ENSPREG00000000455)	ENSPREG00000000454	ENSPREG00000000453	jupa (ENSPREG00000000452)	ENSPREG00000000451	KCNIP2 (ENSPREG00000000450)	ENSPREG00000000449	armh3 (ENSPREG00000000448)	ldb1b (ENSPREG00000000447)	si:dkey-93h22.8 (ENSPREG00000000446)	ENSPREG00000000445	cant1b (ENSPREG00000000444) #9	afmid (ENSPREG00000000443) #21	tk1 (ENSPREG00000000442) #22	syngr2b (ENSPREG00000000441) #24	TMC8 (ENSPREG00000000440) #26	TMC6 (ENSPREG00000000439) #27	NOTUM (ENSPREG00000000438)	aspscr1 (ENSPREG00000000437)	ENSPREG00000000436	ENSPREG00000000435	MAFG (ENSPREG00000000434)	ENSPREG00000000433	pcyt2 (ENSPREG00000000432)	gnav1 (ENSPREG00000000431)	npb (ENSPREG00000000430)	sgsh (ENSPREG00000000429)	slc26a11 (ENSPREG00000000428)	ENSPREG00000000427
Platyfish	MODERN SPECIES	19	krt98 (ENSXMAG00000000157)	krt15 (ENSXMAG00000000173)	krt99 (ENSXMAG00000023618)	ENSXMAG00000000197	ENSXMAG00000025286	jupa (ENSXMAG00000000209)	ENSXMAG00000023553	ENSXMAG00000029713	KCNIP2 (ENSXMAG00000000215)	armh3 (ENSXMAG00000000219)	ldb1b (ENSXMAG00000027796)	si:dkey-93h22.8 (ENSXMAG00000000243)	ENSXMAG00000000245	cant1b (ENSXMAG00000000246) #9	afmid (ENSXMAG00000000249) #21	tk1 (ENSXMAG00000000253) #22	syngr2b (ENSXMAG00000027054) #24	TMC8 (ENSXMAG00000000266) #26	TMC6 (ENSXMAG00000000278) #27	NOTUM (ENSXMAG00000023668)	aspscr1 (ENSXMAG00000000292)	ENSXMAG00000012965	MAFG (ENSXMAG00000012964)	ENSXMAG00000026314	SIRT7 (ENSXMAG00000012959)	pcyt2 (ENSXMAG00000012951)	gnav1 (ENSXMAG00000023416)	npb (ENSXMAG00000012949)	sgsh (ENSXMAG00000012930)	slc26a11 (ENSXMAG00000012920)	ENSXMAG00000022142
NAME_4	ANCESTRAL SPECIES	28	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080	ENSGT01070000253775.b
Mummichog	MODERN SPECIES	375										armh3 (ENSFHEG00000019214)	ldb1b (ENSFHEG00000019148)	ENSFHEG00000019110	ENSFHEG00000019101	cant1b (ENSFHEG00000019061) #9	afmid (ENSFHEG00000019033) #21	tk1 (ENSFHEG00000019021) #22	syngr2b (ENSFHEG00000018990) #24	TMC8 (ENSFHEG00000018980) #26	TMC6 (ENSFHEG00000018970) #27	NOTUM (ENSFHEG00000018956)	aspscr1 (ENSFHEG00000018915)	ENSFHEG00000018798	ENSFHEG00000018790	ENSFHEG00000000669	MAFG (ENSFHEG00000018755)	ENSFHEG00000018733	SIRT7 (ENSFHEG00000018718)	pcyt2 (ENSFHEG00000018710)	gnav1 (ENSFHEG00000018682)	npb (ENSFHEG00000018654)	sgsh (ENSFHEG00000018645)
Sheepshead minnow	MODERN SPECIES	422	ENSCVAG00000019084	ENSCVAG00000000499	krt98 (ENSCVAG00000019102)	krt15 (ENSCVAG00000019131)	krt99 (ENSCVAG00000019139)	ENSCVAG00000019152	ENSCVAG00000019409	jupa (ENSCVAG00000019461)	ENSCVAG00000019480	armh3 (ENSCVAG00000019564)	ldb1b (ENSCVAG00000019587)	si:dkey-93h22.8 (ENSCVAG00000019596)	ENSCVAG00000019679	cant1b (ENSCVAG00000019707) #9	afmid (ENSCVAG00000019732) #21	tk1 (ENSCVAG00000019778) #22	syngr2b (ENSCVAG00000019785) #24	TMC8 (ENSCVAG00000019794) #26	TMC6 (ENSCVAG00000019814) #27	NOTUM (ENSCVAG00000000737)	aspscr1 (ENSCVAG00000019879)	ENSCVAG00000019885	ENSCVAG00000019911	MAFG (ENSCVAG00000019929)	ENSCVAG00000019943	SIRT7 (ENSCVAG00000019953)	pcyt2 (ENSCVAG00000020193)
Oryzias	ANCESTRAL SPECIES	28	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00940000158005	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080.h	ENSGT01070000253775.b
Oryzias_b	ANCESTRAL SPECIES	25	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00940000158005	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000158204.d	ENSGT00390000013080.h	ENSGT01070000253775.b	ENSGT01100000263525.a.b.a.a
Indian medaka	MODERN SPECIES	35	krt94 (ENSOMEG00000011603)	krt98 (ENSOMEG00000011645)	ENSOMEG00000011684	krt99 (ENSOMEG00000011727)	ENSOMEG00000011746	ENSOMEG00000011780	jupa (ENSOMEG00000011864)	KCNIP2 (ENSOMEG00000011905)	armh3 (ENSOMEG00000011996)	tk2 (ENSOMEG00000012043)	ldb1b (ENSOMEG00000012071)	si:dkey-93h22.8 (ENSOMEG00000012140)	ENSOMEG00000012211	cant1b (ENSOMEG00000012241) #9	afmid (ENSOMEG00000012333) #21	tk1 (ENSOMEG00000012372) #22	syngr2b (ENSOMEG00000012392) #24	ENSOMEG00000012410 #26	TMC6 (ENSOMEG00000012507) #27	aspscr1 (ENSOMEG00000012552)	ENSOMEG00000012567	ENSOMEG00000012599	MAFG (ENSOMEG00000012627)	ENSOMEG00000012670	SIRT7 (ENSOMEG00000012708)	pcyt2 (ENSOMEG00000012760)	npb (ENSOMEG00000012783)	sgsh (ENSOMEG00000012828)	slc26a11 (ENSOMEG00000012886)	ENSOMEG00000012910	ENSOMEG00000012941
Javanese ricefish	MODERN SPECIES		KRT19 (ENSOJAG00000000485)	krt98 (ENSOJAG00000000775)	ENSOJAG00000000812	krt99 (ENSOJAG00000000865)	ENSOJAG00000000871	ENSOJAG00000000881	jupa (ENSOJAG00000000979)	KCNIP2 (ENSOJAG00000001166)	armh3 (ENSOJAG00000001194)	tk2 (ENSOJAG00000001245)	ldb1b (ENSOJAG00000001294)	ENSOJAG00000001413	ENSOJAG00000001418	cant1b (ENSOJAG00000001423) #9	afmid (ENSOJAG00000001429) #21	tk1 (ENSOJAG00000001442) #22	syngr2b (ENSOJAG00000001446) #24	ENSOJAG00000001453	ENSOJAG00000001467 #26	TMC6 (ENSOJAG00000001484) #27	aspscr1 (ENSOJAG00000001510)	ENSOJAG00000001539	ENSOJAG00000001550	ENSOJAG00000001583	MAFG (ENSOJAG00000001591)	SIRT7 (ENSOJAG00000001605)	pcyt2 (ENSOJAG00000001619)	npb (ENSOJAG00000001691)	sgsh (ENSOJAG00000001709)	slc26a11 (ENSOJAG00000001781)	ENSOJAG00000001814
Oryzias_a	ANCESTRAL SPECIES	34	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00940000158005	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT00940000175759	ENSGT01050000244894.b.b.d.a #27	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080.h	ENSGT01070000253775.b.g
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	1617																tk1 (ENSOSIG00000005591) #22
Chinese medaka	MODERN SPECIES	3189																tk1 (ENSOSIG00000002197) #22
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000012618	krt99 (ENSORLG00000012569)	ENSORLG00000012551	ENSORLG00000025102	jupa (ENSORLG00000012542)	ENSORLG00000012486	armh3 (ENSORLG00000012426)	tk2 (ENSORLG00000012380)	ldb1b (ENSORLG00000012373)	ENSORLG00000022645	ENSORLG00000028445	si:dkey-93h22.8 (ENSORLG00000012355)	ENSORLG00000012348	cant1b (ENSORLG00000012320) #9	afmid (ENSORLG00000012308) #21	tk1 (ENSORLG00000012303) #22	syngr2b (ENSORLG00000012291) #24	ENSORLG00000029767	TMC8 (ENSORLG00000012270) #26	ENSORLG00000018498	ENSORLG00000002297	TMC6 (ENSORLG00000012252) #27	aspscr1 (ENSORLG00000012233)	ENSORLG00000012206	ENSORLG00000027940	MAFG (ENSORLG00000012170)	ENSORLG00000027084	SIRT7 (ENSORLG00000012165)	pcyt2 (ENSORLG00000012151)	gnav1 (ENSORLG00000012122)	ENSORLG00000028541
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Pomacentridae	ANCESTRAL SPECIES	20	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080	ENSGT01070000253775.b
Pomacentridae_A	ANCESTRAL SPECIES	13	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080	ENSGT01070000253775.b
Amphiprion	ANCESTRAL SPECIES		ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080	ENSGT01070000253775.b
Clown anemonefish	MODERN SPECIES	2109										armh3 (ENSAOCG00000008250)	ldb1b (ENSAOCG00000008172)	si:dkey-93h22.8 (ENSAOCG00000008140)	ENSAOCG00000008119	cant1b (ENSAOCG00000008085) #9	afmid (ENSAOCG00000008051) #21	tk1 (ENSAOCG00000008013) #22	syngr2b (ENSAOCG00000008007) #24	TMC8 (ENSAOCG00000007991) #26	ENSAOCG00000000448	TMC6 (ENSAOCG00000007917) #27	NOTUM (ENSAOCG00000007882)	aspscr1 (ENSAOCG00000007840)	ENSAOCG00000007811	ENSAOCG00000007797	MAFG (ENSAOCG00000001872)	ENSAOCG00000007744	SIRT7 (ENSAOCG00000007728)	pcyt2 (ENSAOCG00000000423)
Orange clownfish	MODERN SPECIES	17	ENSAPEG00000014943	ENSAPEG00000014936	ENSAPEG00000014924	ENSAPEG00000014813	ENSAPEG00000014796	ENSAPEG00000014774	ENSAPEG00000014752	ENSAPEG00000014736	ENSAPEG00000014715	armh3 (ENSAPEG00000014610)	ldb1b (ENSAPEG00000014581)	si:dkey-93h22.8 (ENSAPEG00000014568)	ENSAPEG00000014551	cant1b (ENSAPEG00000014521) #9	afmid (ENSAPEG00000014484) #21	tk1 (ENSAPEG00000014473) #22	syngr2b (ENSAPEG00000014445) #24	ENSAPEG00000014415	TMC8 (ENSAPEG00000014347) #26	TMC6 (ENSAPEG00000014297) #27	NOTUM (ENSAPEG00000014253)	aspscr1 (ENSAPEG00000014220)	ENSAPEG00000014198	ENSAPEG00000014189	ENSAPEG00000014166	MAFG (ENSAPEG00000014143)	ENSAPEG00000014129	SIRT7 (ENSAPEG00000014084)	pcyt2 (ENSAPEG00000014036)	gnav1 (ENSAPEG00000013991)	npb (ENSAPEG00000013970)
Spiny chromis	MODERN SPECIES	26			krt98 (ENSAPOG00000010924)	krt15 (ENSAPOG00000010913)	krt99 (ENSAPOG00000010904)	ENSAPOG00000010890	ENSAPOG00000010819	jupa (ENSAPOG00000010772)	KCNIP2 (ENSAPOG00000010714)	armh3 (ENSAPOG00000000943)	ldb1b (ENSAPOG00000010548)	si:dkey-93h22.8 (ENSAPOG00000001094)	ENSAPOG00000010513	cant1b (ENSAPOG00000010438) #9	afmid (ENSAPOG00000010397) #21	tk1 (ENSAPOG00000010390) #22	syngr2b (ENSAPOG00000010381) #24	TMC8 (ENSAPOG00000010370) #26	TMC6 (ENSAPOG00000010264) #27	NOTUM (ENSAPOG00000010235)	aspscr1 (ENSAPOG00000010186)	ENSAPOG00000010174	ENSAPOG00000010152	MAFG (ENSAPOG00000010112)	ENSAPOG00000010085	SIRT7 (ENSAPOG00000010057)	pcyt2 (ENSAPOG00000010006)	gnav1 (ENSAPOG00000009945)	npb (ENSAPOG00000009877)	sgsh (ENSAPOG00000009865)	slc26a11 (ENSAPOG00000000758)
Bicolor damselfish	MODERN SPECIES	239											ldb1b (ENSSPAG00000010516)	si:dkey-93h22.8 (ENSSPAG00000010602)	ENSSPAG00000010634	cant1b (ENSSPAG00000010710) #9	afmid (ENSSPAG00000010761) #21	tk1 (ENSSPAG00000010781) #22	syngr2b (ENSSPAG00000010794) #24	ADAP2 (ENSSPAG00000010813)	tefm (ENSSPAG00000010830)	ENSSPAG00000010842	suz12b (ENSSPAG00000010969)	utp6 (ENSSPAG00000011871)	rab11fip4b (ENSSPAG00000011975)	ENSSPAG00000011997	ENSSPAG00000012007	ENSSPAG00000012010	ENSSPAG00000012018	ENSSPAG00000012021	ENSSPAG00000012037	PLPPR2 (ENSSPAG00000012085)	elof1 (ENSSPAG00000012103)
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00940000153212.p	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00940000153212.p	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Haplochromini	ANCESTRAL SPECIES	3	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00940000153212.p	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Burton s mouthbrooder	MODERN SPECIES	337	cenpk (ENSHBUG00000019922)	SMAP1 (ENSHBUG00000019912)	krt94 (ENSHBUG00000019853)	krt98 (ENSHBUG00000019771)	krt15 (ENSHBUG00000019759)	ENSHBUG00000019747	ENSHBUG00000000586	jupa (ENSHBUG00000019714)	KCNIP2 (ENSHBUG00000019621)	armh3 (ENSHBUG00000019565)	ldb1b (ENSHBUG00000019378)	si:dkey-93h22.8 (ENSHBUG00000019347)	ENSHBUG00000019327	cant1b (ENSHBUG00000019276) #9	afmid (ENSHBUG00000019247) #21	tk1 (ENSHBUG00000019236) #22	syngr2b (ENSHBUG00000019197) #24	TMC8 (ENSHBUG00000019177) #26	TMC6 (ENSHBUG00000019143) #27	NOTUM (ENSHBUG00000019119)	aspscr1 (ENSHBUG00000019095)	ENSHBUG00000019081	ENSHBUG00000019074	ENSHBUG00000019060	MAFG (ENSHBUG00000019029)	ENSHBUG00000019026	SIRT7 (ENSHBUG00000019019)	pcyt2 (ENSHBUG00000018986)	gnav1 (ENSHBUG00000018929)	npb (ENSHBUG00000018889)	sgsh (ENSHBUG00000018877)
Haplochromini_A	ANCESTRAL SPECIES	2	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00940000153212.p	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Haplochromini_B	ANCESTRAL SPECIES	23	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00940000153212.p	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Zebra mbuna	MODERN SPECIES	1109	SMAP1 (ENSMZEG00005008548)	krt94 (ENSMZEG00005008511)	krt98 (ENSMZEG00005008496)	krt15 (ENSMZEG00005008487)	krt99 (ENSMZEG00005008473)	ENSMZEG00005008461	ENSMZEG00005008443	jupa (ENSMZEG00005008391)	KCNIP2 (ENSMZEG00005008364)	armh3 (ENSMZEG00005008281)	ldb1b (ENSMZEG00005008245)	si:dkey-93h22.8 (ENSMZEG00005008228)	ENSMZEG00005008173	cant1b (ENSMZEG00005008140) #9	afmid (ENSMZEG00005008119) #21	tk1 (ENSMZEG00005008093) #22	syngr2b (ENSMZEG00005008085) #24	TMC8 (ENSMZEG00005008074) #26	TMC6 (ENSMZEG00005008039) #27	NOTUM (ENSMZEG00005008014)	aspscr1 (ENSMZEG00005007985)	ENSMZEG00005007980	ENSMZEG00005007974	ENSMZEG00005007964	MAFG (ENSMZEG00005007955)	ENSMZEG00005007948	SIRT7 (ENSMZEG00005007936)	pcyt2 (ENSMZEG00005007912)	gnav1 (ENSMZEG00005007895)	npb (ENSMZEG00005007885)	sgsh (ENSMZEG00005007867)
Eastern happy	MODERN SPECIES	18	ENSACLG00000018945	krt94 (ENSACLG00000018950)	krt98 (ENSACLG00000018967)	krt15 (ENSACLG00000018979)	krt99 (ENSACLG00000019002)	ENSACLG00000019032	ENSACLG00000019016	jupa (ENSACLG00000019071)	KCNIP2 (ENSACLG00000019119)	armh3 (ENSACLG00000019143)	ldb1b (ENSACLG00000019279)	si:dkey-93h22.8 (ENSACLG00000019359)	ENSACLG00000019393	cant1b (ENSACLG00000019543) #9	afmid (ENSACLG00000019597) #21	tk1 (ENSACLG00000019632) #22	syngr2b (ENSACLG00000019666) #24	TMC8 (ENSACLG00000019683) #26	TMC6 (ENSACLG00000019720) #27	NOTUM (ENSACLG00000019776)	aspscr1 (ENSACLG00000019805)	ENSACLG00000019944	ENSACLG00000019960	ENSACLG00000019971	MAFG (ENSACLG00000019998)	ENSACLG00000020013	SIRT7 (ENSACLG00000020038)	pcyt2 (ENSACLG00000020079)	gnav1 (ENSACLG00000020120)	npb (ENSACLG00000020145)	sgsh (ENSACLG00000020155)
P. nyererei	MODERN SPECIES	360	SMAP1 (ENSPNYG00000003337)	krt94 (ENSPNYG00000003207)	krt98 (ENSPNYG00000003181)	krt15 (ENSPNYG00000003167)	krt99 (ENSPNYG00000003158)	ENSPNYG00000003128	ENSPNYG00000002974	jupa (ENSPNYG00000002908)	KCNIP2 (ENSPNYG00000002869)	armh3 (ENSPNYG00000002768)	ldb1b (ENSPNYG00000002704)	si:dkey-93h22.8 (ENSPNYG00000002682)	ENSPNYG00000002625	cant1b (ENSPNYG00000002587) #9	afmid (ENSPNYG00000002523) #21	tk1 (ENSPNYG00000002489) #22	syngr2b (ENSPNYG00000002480) #24	TMC8 (ENSPNYG00000002456) #26	TMC6 (ENSPNYG00000002422) #27	NOTUM (ENSPNYG00000002336)	aspscr1 (ENSPNYG00000002321)	ENSPNYG00000002307	ENSPNYG00000002275	ENSPNYG00000002243	MAFG (ENSPNYG00000002228)	ENSPNYG00000002215	SIRT7 (ENSPNYG00000002181)	pcyt2 (ENSPNYG00000002121)	gnav1 (ENSPNYG00000002087)	npb (ENSPNYG00000002038)	sgsh (ENSPNYG00000002001)
Lyretail cichlid	MODERN SPECIES	308	lbx1b (ENSNBRG00000022180)	cenpk (ENSNBRG00000022205)	SMAP1 (ENSNBRG00000022222)	krt94 (ENSNBRG00000022244)	krt98 (ENSNBRG00000022456)	krt15 (ENSNBRG00000022980)	ENSNBRG00000022987	ENSNBRG00000023010	jupa (ENSNBRG00000023053)	armh3 (ENSNBRG00000023092)	ldb1b (ENSNBRG00000023119)	ENSNBRG00000023152	ENSNBRG00000023168	cant1b (ENSNBRG00000023191) #9	afmid (ENSNBRG00000023215) #21	tk1 (ENSNBRG00000023233) #22	syngr2b (ENSNBRG00000023245) #24	ENSNBRG00000023261 #26	TMC6 (ENSNBRG00000023281) #27	NOTUM (ENSNBRG00000023299)	aspscr1 (ENSNBRG00000023333)	ENSNBRG00000023356	ENSNBRG00000023461	ENSNBRG00000023635	ENSNBRG00000023646	MAFG (ENSNBRG00000023654)	SIRT7 (ENSNBRG00000023660)	pcyt2 (ENSNBRG00000023667)	gnav1 (ENSNBRG00000023676)	npb (ENSNBRG00000023685)	sgsh (ENSNBRG00000023693)
Nile tilapia	MODERN SPECIES	18	SMAP1 (ENSONIG00000018813)	krt94 (ENSONIG00000018807)	krt15 (ENSONIG00000037937)	krt99 (ENSONIG00000018806)	ENSONIG00000032121	krt98 (ENSONIG00000018810)	ENSONIG00000018805	jupa (ENSONIG00000018803)	KCNIP2 (ENSONIG00000018800)	armh3 (ENSONIG00000018799)	ldb1b (ENSONIG00000018797)	si:dkey-93h22.8 (ENSONIG00000033606)	ENSONIG00000018794	cant1b (ENSONIG00000018793) #9	afmid (ENSONIG00000018792) #21	tk1 (ENSONIG00000018789) #22	syngr2b (ENSONIG00000018788) #24	ENSONIG00000042508	ENSONIG00000037175	TMC8 (ENSONIG00000018787) #26	TMC6 (ENSONIG00000018785) #27	NOTUM (ENSONIG00000018783)	aspscr1 (ENSONIG00000018780)	ENSONIG00000040220	ENSONIG00000031715	ENSONIG00000018774	MAFG (ENSONIG00000032504)	ENSONIG00000025578	SIRT7 (ENSONIG00000017759)	pcyt2 (ENSONIG00000017756)	npb (ENSONIG00000027286)
Midas cichlid	MODERN SPECIES	1113	lbx1b (ENSACIG00000007010)	cenpk (ENSACIG00000007018)	smap1 (ENSACIG00000007041)	krt94 (ENSACIG00000007065)	krt98 (ENSACIG00000007137)	krt15 (ENSACIG00000007504)	ENSACIG00000008017	ENSACIG00000008033	jupa (ENSACIG00000008093)	KCNIP2 (ENSACIG00000008119)	armh3 (ENSACIG00000008152)	ldb1b (ENSACIG00000008206)	ENSACIG00000008238	cant1b (ENSACIG00000008270) #9	afmid (ENSACIG00000008288) #21	tk1 (ENSACIG00000008324) #22	syngr2b (ENSACIG00000008502) #24	TMC8 (ENSACIG00000008565) #26	TMC6 (ENSACIG00000008608) #27	NOTUM (ENSACIG00000008639)	aspscr1 (ENSACIG00000008662)	ENSACIG00000008695	ENSACIG00000008706	ENSACIG00000008721	MAFG (ENSACIG00000008743)	SIRT7 (ENSACIG00000008760)	pcyt2 (ENSACIG00000008829)	gnav1 (ENSACIG00000008859)	npb (ENSACIG00000008888)	sgsh (ENSACIG00000008934)	slc26a11 (ENSACIG00000008967)
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Carangaria	ANCESTRAL SPECIES		ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00390000007091	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Pleuronectoidei	ANCESTRAL SPECIES	22	ENSGT00390000006243	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080	ENSGT01070000253775.b
Tongue sole	MODERN SPECIES	19	fat1a (ENSCSEG00000015927)	frg1 (ENSCSEG00000015950)	asah1b (ENSCSEG00000015956)	slc2a15b (ENSCSEG00000016002)	lbx1b (ENSCSEG00000016019)	cenpk (ENSCSEG00000016029)	ENSCSEG00000016041	krt94 (ENSCSEG00000016058)	krt98 (ENSCSEG00000016068)	krt15 (ENSCSEG00000016076)	ENSCSEG00000016091	jupa (ENSCSEG00000016113)	armh3 (ENSCSEG00000016153)	ldb1b (ENSCSEG00000016177)	afmid (ENSCSEG00000016202) #21	tk1 (ENSCSEG00000016219) #22	ENSCSEG00000016224 #27	ENSCSEG00000016228 #27	aspscr1 (ENSCSEG00000016235)	ENSCSEG00000016247	ENSCSEG00000016258	PCGF2 (ENSCSEG00000016264)	PIP4K2B (ENSCSEG00000016276)	psmb3 (ENSCSEG00000016289)	cwc25 (ENSCSEG00000016305)	sp6 (ENSCSEG00000016307)	scrn2 (ENSCSEG00000016312)	PLA2G12B (ENSCSEG00000016322)	ENSCSEG00000016329	ENSCSEG00000016341	QPRT (ENSCSEG00000016436)
Turbot	MODERN SPECIES	20	cenpk (ENSSMAG00000006290)	ENSSMAG00000006263	krt94 (ENSSMAG00000006254)	krt98 (ENSSMAG00000006243)	krt15 (ENSSMAG00000006227)	krt99 (ENSSMAG00000006200)	ENSSMAG00000006186	ENSSMAG00000006168	jupa (ENSSMAG00000006134)	KCNIP2 (ENSSMAG00000006111)	ENSSMAG00000006048	ldb1b (ENSSMAG00000005937)	ENSSMAG00000005860	cant1b (ENSSMAG00000005832) #9	afmid (ENSSMAG00000005807) #21	tk1 (ENSSMAG00000005773) #22	syngr2b (ENSSMAG00000005745) #24	ENSSMAG00000024985	TMC8 (ENSSMAG00000005735) #26	TMC6 (ENSSMAG00000005712) #27	ENSSMAG00000005689	aspscr1 (ENSSMAG00000005618)	ENSSMAG00000005606	ENSSMAG00000005576	MAFG (ENSSMAG00000028574)	ENSSMAG00000022806	SIRT7 (ENSSMAG00000005491)	pcyt2 (ENSSMAG00000005469)	gnav1 (ENSSMAG00000005458)	npb (ENSSMAG00000005425)	sgsh (ENSSMAG00000005370)
Carangaria_A	ANCESTRAL SPECIES	24	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Barramundi perch	MODERN SPECIES	123	cenpk (ENSLCAG00010003895)	SMAP1 (ENSLCAG00010003899)	krt94 (ENSLCAG00010003907)	krt98 (ENSLCAG00010003920)	krt15 (ENSLCAG00010003939)	krt99 (ENSLCAG00010004003)	ENSLCAG00010004025	ENSLCAG00010004050	jupa (ENSLCAG00010004132)	KCNIP2 (ENSLCAG00010004262)	armh3 (ENSLCAG00010004845)	ldb1b (ENSLCAG00010004959)	ENSLCAG00010005143	cant1b (ENSLCAG00010005148) #9	afmid (ENSLCAG00010005154) #21	tk1 (ENSLCAG00010005161) #22	syngr2b (ENSLCAG00010005173) #24	ENSLCAG00010005174	ENSLCAG00010005188 #26	TMC6 (ENSLCAG00010005217) #27	NOTUM (ENSLCAG00010005289)	aspscr1 (ENSLCAG00010005295)	CACNA1H (ENSLCAG00010005311)	ENSLCAG00010005338	ENSLCAG00010005350	MAFG (ENSLCAG00010005385)	ENSLCAG00010005390	SIRT7 (ENSLCAG00010005400)	pcyt2 (ENSLCAG00010005411)	gnav1 (ENSLCAG00010005435)	npb (ENSLCAG00010005437)
Seriola	ANCESTRAL SPECIES	11	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080	ENSGT01070000253775.b
Greater amberjack	MODERN SPECIES	84	SMAP1 (ENSSDUG00000000217)	krt94 (ENSSDUG00000000267)	krt98 (ENSSDUG00000000282)	krt15 (ENSSDUG00000000355)	krt99 (ENSSDUG00000000457)	ENSSDUG00000000957	ENSSDUG00000000985	jupa (ENSSDUG00000001059)	KCNIP2 (ENSSDUG00000001121)	armh3 (ENSSDUG00000001167)	ldb1b (ENSSDUG00000001247)	si:dkey-93h22.8 (ENSSDUG00000001268)	ENSSDUG00000001303	cant1b (ENSSDUG00000001389) #9	afmid (ENSSDUG00000001414) #21	tk1 (ENSSDUG00000001455) #22	syngr2b (ENSSDUG00000001485) #24	TMC8 (ENSSDUG00000001533) #26	TMC6 (ENSSDUG00000001594) #27	NOTUM (ENSSDUG00000001646)	aspscr1 (ENSSDUG00000001678)	ENSSDUG00000001716	ENSSDUG00000001749	MAFG (ENSSDUG00000001779)	SIRT7 (ENSSDUG00000001789)	pcyt2 (ENSSDUG00000001820)	gnav1 (ENSSDUG00000001865)	npb (ENSSDUG00000001901)	sgsh (ENSSDUG00000001936)	slc26a11 (ENSSDUG00000001983)	ENSSDUG00000002038
Yellowtail amberjack	MODERN SPECIES	3041	SMAP1 (ENSSLDG00000010906)	krt94 (ENSSLDG00000010940)	krt98 (ENSSLDG00000010975)	krt15 (ENSSLDG00000011011)	krt99 (ENSSLDG00000011125)	ENSSLDG00000011518	ENSSLDG00000011569	jupa (ENSSLDG00000011768)	KCNIP2 (ENSSLDG00000011824)	armh3 (ENSSLDG00000011864)	ldb1b (ENSSLDG00000011963)	si:dkey-93h22.8 (ENSSLDG00000012010)	ENSSLDG00000012042	cant1b (ENSSLDG00000012095) #9	afmid (ENSSLDG00000012120) #21	tk1 (ENSSLDG00000012141) #22	syngr2b (ENSSLDG00000012174) #24	TMC8 (ENSSLDG00000012181) #26	TMC6 (ENSSLDG00000012223) #27	NOTUM (ENSSLDG00000012241)	aspscr1 (ENSSLDG00000012283)	ENSSLDG00000012314	ENSSLDG00000012331	MAFG (ENSSLDG00000012357)	ENSSLDG00000012375	SIRT7 (ENSSLDG00000012403)	pcyt2 (ENSSLDG00000012438)	gnav1 (ENSSLDG00000012475)	npb (ENSSLDG00000012517)	sgsh (ENSSLDG00000012536)	slc26a11 (ENSSLDG00000012566)
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Zig-zag eel	MODERN SPECIES		ENSMAMG00000010206	krt94 (ENSMAMG00000010209)	krt98 (ENSMAMG00000010267)	krt15 (ENSMAMG00000010835)	krt99 (ENSMAMG00000010847)	ENSMAMG00000010885	ENSMAMG00000010892	jupa (ENSMAMG00000010941)	KCNIP2 (ENSMAMG00000011011)	ARMH3 (ENSMAMG00000011040)	ldb1b (ENSMAMG00000011142)	si:dkey-93h22.8 (ENSMAMG00000011169)	ENSMAMG00000011193	cant1b (ENSMAMG00000024398) #9	afmid (ENSMAMG00000011213) #21	tk1 (ENSMAMG00000011249) #22	syngr2b (ENSMAMG00000011259) #24	ENSMAMG00000026199	TMC8 (ENSMAMG00000011290) #26	TMC6 (ENSMAMG00000011348) #27	ENSMAMG00000011354	aspscr1 (ENSMAMG00000011385)	MYADML2 (ENSMAMG00000026044)	ENSMAMG00000011403	MAFG (ENSMAMG00000011427)	ENSMAMG00000011439	SIRT7 (ENSMAMG00000011451)	pcyt2 (ENSMAMG00000011472)	gnav1 (ENSMAMG00000011521)	npb (ENSMAMG00000011561)	sgsh (ENSMAMG00000011541)
Anabantoidei	ANCESTRAL SPECIES		ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Siamese fighting fish	MODERN SPECIES		ENSBSLG00000002718	ENSBSLG00000002654	ENSBSLG00000002645	ENSBSLG00000002542	mri1 (ENSBSLG00000002499)	CC2D1A (ENSBSLG00000002295)	nanos3 (ENSBSLG00000002157)	ENSBSLG00000002134	ENSBSLG00000001785	ENSBSLG00000001707	slc26a11 (ENSBSLG00000001654)	sgsh (ENSBSLG00000001638)	npb (ENSBSLG00000001629)	gnav1 (ENSBSLG00000001615)	pcyt2 (ENSBSLG00000001596)	tk1 (ENSBSLG00000001565) #22	syngr2b (ENSBSLG00000001559) #24	TMC8 (ENSBSLG00000001548) #26	TMC6 (ENSBSLG00000001526) #27	NOTUM (ENSBSLG00000001513)	aspscr1 (ENSBSLG00000001504)	ENSBSLG00000001498	ENSBSLG00000001474	MAFG (ENSBSLG00000001443)	ENSBSLG00000001430	SIRT7 (ENSBSLG00000001364)	afmid (ENSBSLG00000001322) #21	cant1b (ENSBSLG00000001309) #9	ENSBSLG00000001281	si:dkey-93h22.8 (ENSBSLG00000001254)	ldb1b (ENSBSLG00000001219)
Climbing perch	MODERN SPECIES		ENSATEG00000020598	krt94 (ENSATEG00000020591)	krt98 (ENSATEG00000020567)	krt15 (ENSATEG00000020542)	krt99 (ENSATEG00000020521)	ENSATEG00000020511	ENSATEG00000020436	jupa (ENSATEG00000020387)	KCNIP2 (ENSATEG00000020347)	ARMH3 (ENSATEG00000020255)	ldb1b (ENSATEG00000020230)	ENSATEG00000020218	ENSATEG00000020161	cant1b (ENSATEG00000020130) #9	afmid (ENSATEG00000020116) #21	tk1 (ENSATEG00000020084) #22	syngr2b (ENSATEG00000029117) #24	ENSATEG00000027769	ENSATEG00000027348	TMC8 (ENSATEG00000028212) #26	TMC8 (ENSATEG00000020004) #26	TMC6 (ENSATEG00000019964) #27	ENSATEG00000019940	aspscr1 (ENSATEG00000019927)	ENSATEG00000019897	ENSATEG00000019873	MAFG (ENSATEG00000019866)	ENSATEG00000019852	SIRT7 (ENSATEG00000019785)	pcyt2 (ENSATEG00000019734)	gnav1 (ENSATEG00000019693)
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Tetraodontidae	ANCESTRAL SPECIES	33	ENSGT00940000159529	ENSGT00940000155809.o	ENSGT00940000155257.b.a	ENSGT00530000064791	ENSGT00940000157716	ENSGT00390000014056.c.b	ENSGT00390000000087	ENSGT00510000047820.k.b	ENSGT00940000161814.g.b.e	ENSGT00940000166522	ENSGT00390000004692.d.a.m.b	ENSGT00940000154063.C.a.a.a.b.a.b	ENSGT00940000154063.C.a.a.a.a	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00980000203398	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Fugu	MODERN SPECIES	8	mxi1 (ENSTRUG00000030173)	add3a (ENSTRUG00000022794)	ENSTRUG00000029255	xpnpep1 (ENSTRUG00000006326)	cxcl12b (ENSTRUG00000028059)	tmem186 (ENSTRUG00000025097)	gde1 (ENSTRUG00000006099)	ENSTRUG00000022122	prkacab (ENSTRUG00000005663)	ASF1B (ENSTRUG00000005609)	ENSTRUG00000002160	ENSTRUG00000024907	ENSTRUG00000013164	cant1b (ENSTRUG00000013146) #9	afmid (ENSTRUG00000013122) #21	tk1 (ENSTRUG00000013060) #22	syngr2b (ENSTRUG00000022503) #24	ENSTRUG00000032792	ENSTRUG00000029906	TMC8 (ENSTRUG00000012697) #26	TMC6 (ENSTRUG00000012500) #27	NOTUM (ENSTRUG00000012438)	NOTUM (ENSTRUG00000023602)	aspscr1 (ENSTRUG00000012353)	ENSTRUG00000012323	ENSTRUG00000012095	MAFG (ENSTRUG00000026437)	ENSTRUG00000026592	SIRT7 (ENSTRUG00000011956)	pcyt2 (ENSTRUG00000011781)	gnav1 (ENSTRUG00000011603)
Tetraodon	MODERN SPECIES	10	dusp5 (ENSTNIG00000010584)	mxi1 (ENSTNIG00000010585)	add3a (ENSTNIG00000010586)	ENSTNIG00000000139	ENSTNIG00000002827	xpnpep1 (ENSTNIG00000002826)	cxcl12b (ENSTNIG00000016533)	gde1 (ENSTNIG00000014040)	ENSTNIG00000001037	prkacab (ENSTNIG00000014041)	ASF1B (ENSTNIG00000014042)	ENSTNIG00000014043	ENSTNIG00000000320	cant1b (ENSTNIG00000014044) #9	afmid (ENSTNIG00000014045) #21	tk1 (ENSTNIG00000014046) #22	ENSTNIG00000014047	TMC8 (ENSTNIG00000014048) #26	TMC6 (ENSTNIG00000014049) #27	NOTUM (ENSTNIG00000014050)	aspscr1 (ENSTNIG00000014051)	ENSTNIG00000014052	ENSTNIG00000014053	MAFG (ENSTNIG00000014054)	SIRT7 (ENSTNIG00000014055)	pcyt2 (ENSTNIG00000014056)	gnav1 (ENSTNIG00000014057)	npb (ENSTNIG00000014058)	sgsh (ENSTNIG00000014059)	slc26a11 (ENSTNIG00000014060)	ENSTNIG00000014061
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Ballan wrasse	MODERN SPECIES	773										armh3 (ENSLBEG00000024242)	ldb1b (ENSLBEG00000024140)	si:dkey-93h22.8 (ENSLBEG00000024075)	ENSLBEG00000023997	cant1b (ENSLBEG00000023965) #9	afmid (ENSLBEG00000023920) #21	tk1 (ENSLBEG00000023874) #22	syngr2b (ENSLBEG00000023773) #24
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Eupecaria_C	ANCESTRAL SPECIES	22	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	21	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
European seabass	MODERN SPECIES	20	ENSDLAG00005024602	krt94 (ENSDLAG00005024613)	krt98 (ENSDLAG00005029695)	krt15 (ENSDLAG00005024650)	krt99 (ENSDLAG00005024665)	ENSDLAG00005024681	ENSDLAG00005024684	jupa (ENSDLAG00005024780)	KCNIP2 (ENSDLAG00005031164)	ARMH3 (ENSDLAG00005024926)	ldb1b (ENSDLAG00005024961)	si:dkey-93h22.8 (ENSDLAG00005028092)	ENSDLAG00005025007	cant1b (ENSDLAG00005029318) #9	afmid (ENSDLAG00005034245) #21	tk1 (ENSDLAG00005030785) #22	syngr2b (ENSDLAG00005033299) #24	ENSDLAG00005025036	TMC8 (ENSDLAG00005028642) #26	TMC6 (ENSDLAG00005025047) #27	ENSDLAG00005025069	aspscr1 (ENSDLAG00005025150)	ENSDLAG00005030103	ENSDLAG00005011813	ENSDLAG00005029633	ENSDLAG00005011862	pcyt2 (ENSDLAG00005011939)	ENSDLAG00005034199	slc26a11 (ENSDLAG00005012116)	ENSDLAG00005028750	ENSDLAG00005012373
Large yellow croaker	MODERN SPECIES	481	SMAP1 (ENSLCRG00005003780)	krt94 (ENSLCRG00005003776)	krt15 (ENSLCRG00005003773)	krt98 (ENSLCRG00005003770)	krt99 (ENSLCRG00005003768)	ENSLCRG00005003767	ENSLCRG00005003733	jupa (ENSLCRG00005003367)	KCNIP2 (ENSLCRG00005003351)	armh3 (ENSLCRG00005003267)	ldb1b (ENSLCRG00005003254)	si:dkey-93h22.8 (ENSLCRG00005003250)	ENSLCRG00005003245	cant1b (ENSLCRG00005003240) #9	afmid (ENSLCRG00005003233) #21	tk1 (ENSLCRG00005003228) #22	syngr2b (ENSLCRG00005003224) #24	TMC8 (ENSLCRG00005003218) #26	TMC6 (ENSLCRG00005003214) #27	NOTUM (ENSLCRG00005002461)	aspscr1 (ENSLCRG00005002423)	ENSLCRG00005002411	ENSLCRG00005002396	MAFG (ENSLCRG00005022217)	ENSLCRG00005022216	ENSLCRG00005022214	SIRT7 (ENSLCRG00005022213)	pcyt2 (ENSLCRG00005022100)	ENSLCRG00005022079	gnav1 (ENSLCRG00005022072)	npb (ENSLCRG00005022067)
Gilthead seabream	MODERN SPECIES		krt98 (ENSSAUG00010002917)	krt15 (ENSSAUG00010002881)	krt99 (ENSSAUG00010002863)	ENSSAUG00010002849	ENSSAUG00010002410	jupa (ENSSAUG00010001232)	KCNIP2 (ENSSAUG00010001214)	armh3 (ENSSAUG00010001174)	ldb1b (ENSSAUG00010001148)	si:dkey-93h22.8 (ENSSAUG00010001142)	ENSSAUG00010001140	ENSSAUG00010001136	ENSSAUG00010001132	cant1b (ENSSAUG00010001126) #9	afmid (ENSSAUG00010001124) #21	tk1 (ENSSAUG00010001120) #22	syngr2b (ENSSAUG00010001118) #24	ENSSAUG00010001115	ENSSAUG00010001110	TMC8 (ENSSAUG00010001103) #26	TMC6 (ENSSAUG00010001095) #27	NOTUM (ENSSAUG00010001089)	aspscr1 (ENSSAUG00010001083)	ENSSAUG00010001081	ENSSAUG00010001075	MAFG (ENSSAUG00010001072)	ENSSAUG00010001071	SIRT7 (ENSSAUG00010001049)	pcyt2 (ENSSAUG00010001018)	gnav1 (ENSSAUG00010001012)	npb (ENSSAUG00010001011)
Perciformes	ANCESTRAL SPECIES	2	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Perciformes_a	ANCESTRAL SPECIES		ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00980000203398	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Channel bull blenny	MODERN SPECIES		SMAP1 (ENSCGOG00000007902)	krt94 (ENSCGOG00000007899)	krt98 (ENSCGOG00000007897)	krt15 (ENSCGOG00000007877)	krt99 (ENSCGOG00000007820)	ENSCGOG00000007818	ENSCGOG00000007811	jupa (ENSCGOG00000004237)	KCNIP2 (ENSCGOG00000003983)	armh3 (ENSCGOG00000003464)	ldb1b (ENSCGOG00000002517)	si:dkey-93h22.8 (ENSCGOG00000002491)	ENSCGOG00000002474	cant1b (ENSCGOG00000002471) #9	afmid (ENSCGOG00000002460) #21	tk1 (ENSCGOG00000002445) #22	syngr2b (ENSCGOG00000002442) #24	TMC8 (ENSCGOG00000002433) #26	TMC6 (ENSCGOG00000002418) #27	NOTUM (ENSCGOG00000002389)	aspscr1 (ENSCGOG00000002377)	ENSCGOG00000002369	ENSCGOG00000002322	MAFG (ENSCGOG00000002319)	ENSCGOG00000002317	ENSCGOG00000002313	SIRT7 (ENSCGOG00000002302)	pcyt2 (ENSCGOG00000002036)	gnav1 (ENSCGOG00000002014)	npb (ENSCGOG00000002012)	sgsh (ENSCGOG00000001955)
Pike perch	MODERN SPECIES	8	ENSSLUG00000009915	krt98 (ENSSLUG00000009937)	krt15 (ENSSLUG00000009939)	krt99 (ENSSLUG00000009950)	ENSSLUG00000009982	ENSSLUG00000009988	jupa (ENSSLUG00000010039)	KCNIP2 (ENSSLUG00000010934)	ENSSLUG00000010956	armh3 (ENSSLUG00000010972)	ldb1b (ENSSLUG00000011064)	ENSSLUG00000011635	ENSSLUG00000011643	cant1b (ENSSLUG00000011655) #9	afmid (ENSSLUG00000011671) #21	tk1 (ENSSLUG00000011746) #22	syngr2b (ENSSLUG00000011754) #24	ENSSLUG00000011757	TMC8 (ENSSLUG00000011774) #26	TMC6 (ENSSLUG00000011795) #27	NOTUM (ENSSLUG00000011812)	aspscr1 (ENSSLUG00000011832)	ENSSLUG00000011837	ENSSLUG00000011839	MAFG (ENSSLUG00000011872)	ENSSLUG00000011877	SIRT7 (ENSSLUG00000011885)	pcyt2 (ENSSLUG00000011895)	gnav1 (ENSSLUG00000011932)	npb (ENSSLUG00000011938)	sgsh (ENSSLUG00000011945)
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00940000155884.b	ENSGT00940000155258	ENSGT00950000182969.B.c.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.b	ENSGT00950000182969.B.c.b	ENSGT00400000024592	ENSGT00940000162183	ENSGT00940000156395.e	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080
Stickleback	MODERN SPECIES	4	gcdha (ENSGACG00000019112)	acp5a (ENSGACG00000019109)	ilf3a (ENSGACG00000019106)	ptger1a (ENSGACG00000019103)	ENSGACG00000019102	ENSGACG00000019100	prdx2 (ENSGACG00000019097)	JUNB (ENSGACG00000019095)	BEST2 (ENSGACG00000019093)	get3 (ENSGACG00000019091)	ENSGACG00000019090	ENSGACG00000019074	ENSGACG00000019073	ENSGACG00000019070	afmid (ENSGACG00000019065) #21	tk1 (ENSGACG00000019062) #22	syngr2b (ENSGACG00000019060) #24	ENSGACG00000019059	TMC8 (ENSGACG00000019054) #26	TMC6 (ENSGACG00000019048) #27	NOTUM (ENSGACG00000019047)	aspscr1 (ENSGACG00000019046)	ENSGACG00000019045	ENSGACG00000019043	mafgb (ENSGACG00000019041)	ENSGACG00000019039	SIRT7 (ENSGACG00000019035)	pcyt2 (ENSGACG00000019032)	gnav1 (ENSGACG00000019015)	npb (ENSGACG00000019013)	sgsh (ENSGACG00000019010)
Lumpfish	DUPLICATION
Lumpfish	MODERN SPECIES		ENSCLMG00005014360	slc26a11 (ENSCLMG00005014361)	sgsh (ENSCLMG00005014565)	npb (ENSCLMG00005014567)	gnav1 (ENSCLMG00005014568)	pcyt2 (ENSCLMG00005014576)	SIRT7 (ENSCLMG00005014808)	ENSCLMG00005014844	MAFG (ENSCLMG00005014845)	ENSCLMG00005014849	ENSCLMG00005014916	aspscr1 (ENSCLMG00005014918)	NOTUM (ENSCLMG00005014926)	ENSCLMG00005014933 #27	ENSCLMG00005014935 #26	tk1 (ENSCLMG00005014937) #22	ENSCLMG00005014938	cant1b (ENSCLMG00005014939) #9	afmid (ENSCLMG00005014941) #21	tk1 (ENSCLMG00005014944) #22	syngr2b (ENSCLMG00005014946) #24	ENSCLMG00005014947	ENSCLMG00005014948	cant1b (ENSCLMG00005014949) #9	ENSCLMG00005014950	si:dkey-93h22.8 (ENSCLMG00005014957)	ldb1b (ENSCLMG00005014963)	armh3 (ENSCLMG00005014981)	KCNIP2 (ENSCLMG00005015013)	jupa (ENSCLMG00005015158)	ENSCLMG00005015793
Lumpfish	MODERN SPECIES		gnav1 (ENSCLMG00005014568)	pcyt2 (ENSCLMG00005014576)	SIRT7 (ENSCLMG00005014808)	ENSCLMG00005014844	MAFG (ENSCLMG00005014845)	ENSCLMG00005014849	ENSCLMG00005014916	aspscr1 (ENSCLMG00005014918)	NOTUM (ENSCLMG00005014926)	ENSCLMG00005014933 #27	ENSCLMG00005014935 #26	tk1 (ENSCLMG00005014937) #22	ENSCLMG00005014938	cant1b (ENSCLMG00005014939) #9	afmid (ENSCLMG00005014941) #21	tk1 (ENSCLMG00005014944) #22	syngr2b (ENSCLMG00005014946) #24	ENSCLMG00005014947	ENSCLMG00005014948	cant1b (ENSCLMG00005014949) #9	ENSCLMG00005014950	si:dkey-93h22.8 (ENSCLMG00005014957)	ldb1b (ENSCLMG00005014963)	armh3 (ENSCLMG00005014981)	KCNIP2 (ENSCLMG00005015013)	jupa (ENSCLMG00005015158)	ENSCLMG00005015793	ENSCLMG00005016353	krt99 (ENSCLMG00005016355)	krt15 (ENSCLMG00005016356)	krt15 (ENSCLMG00005016364)
Pinecone sodierfish	MODERN SPECIES		SMAP1 (ENSMMDG00005007676)	krt94 (ENSMMDG00005007671)	krt98 (ENSMMDG00005007462)	krt15 (ENSMMDG00005007456)	krt99 (ENSMMDG00005007454)	ENSMMDG00005007443	ENSMMDG00005007084	jupa (ENSMMDG00005005176)	KCNIP2 (ENSMMDG00005004975)	armh3 (ENSMMDG00005004934)	ldb1b (ENSMMDG00005003141)	ENSMMDG00005003071	ENSMMDG00005003059	cant1b (ENSMMDG00005003053) #9	afmid (ENSMMDG00005003026) #21	tk1 (ENSMMDG00005003015) #22	syngr2b (ENSMMDG00005003010) #24	ENSMMDG00005003001	TMC8 (ENSMMDG00005002983) #26	TMC6 (ENSMMDG00005002968) #27	NOTUM (ENSMMDG00005002962)	aspscr1 (ENSMMDG00005002941)	ENSMMDG00005002928	ENSMMDG00005002703	MAFG (ENSMMDG00005002644)	ENSMMDG00005002633	SIRT7 (ENSMMDG00005017443)	pcyt2 (ENSMMDG00005017411)	gnav1 (ENSMMDG00005017406)	npb (ENSMMDG00005017404)	sgsh (ENSMMDG00005017401)
Protacanthopterygii	ANCESTRAL SPECIES	67					ENSGT00390000008454	ENSGT00390000002223	ENSGT00940000157798.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183127.c.b.d.a.a.a	ENSGT00940000161847.b.a.e.a.b.b	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093 #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a #27	ENSGT00390000015892.a	ENSGT00940000156853	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d
Northern pike	MODERN SPECIES	8	ENSELUG00000030337	KCNIP2 (ENSELUG00000019136)	armh3 (ENSELUG00000001513)	ldb1b (ENSELUG00000018961)	ENSELUG00000018909	ENSELUG00000018940	ENSELUG00000018834	ENSELUG00000026073	ENSELUG00000018884	ENSELUG00000030589	ENSELUG00000018858	ENSELUG00000018785	ENSELUG00000018771	cant1b (ENSELUG00000018726) #9	afmid (ENSELUG00000018695) #21	tk1 (ENSELUG00000018641) #22	syngr2b (ENSELUG00000018623) #24	ENSELUG00000029936	ENSELUG00000029615	TMC8 (ENSELUG00000018605) #26	TMC6 (ENSELUG00000018568) #27	NOTUM (ENSELUG00000018482)	aspscr1 (ENSELUG00000018418)	ENSELUG00000018341	ENSELUG00000000769	MAFG (ENSELUG00000031752)	ENSELUG00000033255	ENSELUG00000018256	SIRT7 (ENSELUG00000018223)	pcyt2 (ENSELUG00000018189)	gnav1 (ENSELUG00000018135)
Salmoninae	ANCESTRAL SPECIES	14	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00970000194718.b.b.a.b.b	ENSGT00940000157798.b.e	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183127.c.b.d.a.a.a.f	ENSGT00940000161847.b.a.e.a.b.b	ENSGT00950000183127.c.b.d.a.a.a.e.a	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093.d.a #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a.f.a #27	ENSGT00390000015892.a.c	ENSGT00940000156853.p.a.a.a
Salmoninae_a	ANCESTRAL SPECIES	33	ENSGT00940000162611.a.a.a.b	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.b.c.a.a.a.b	ENSGT00970000194718.b.b.a.b.b	ENSGT00940000157798.b.e	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183127.c.b.d.a.a.a.f	ENSGT00940000161847.b.a.e.a.b.b	ENSGT00950000183127.c.b.d.a.a.a.e.a	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093.d.a #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a.f.a #27	ENSGT00390000015892.a.c	ENSGT00940000156853.o	ENSGT00940000156853.p.a.b	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b.b	ENSGT00390000004090	ENSGT00940000159703	ENSGT00550000075065.b.e.b	ENSGT00940000164753.b
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	289											ENSGT00950000183127.c.b.d.a.a.a.f.b	ENSGT00950000183137.a.l.d	ENSGT00390000007726.a.b	ENSGT00390000012872.b #9	ENSGT00390000011093.d.a #21	ENSGT00390000011309.u #22
River trout	MODERN SPECIES	270										ENSSTUG00000024907	ENSSTUG00000024520	si:dkey-93h22.8 (ENSSTUG00000024483)	ENSSTUG00000024470	cant1b (ENSSTUG00000024463) #9	afmid (ENSSTUG00000024410) #21	tk1 (ENSSTUG00000024395) #22	syngr2b (ENSSTUG00000024384) #24	ENSSTUG00000024361
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000119088	ENSSSAG00000114833	ENSSSAG00000092058	ENSSSAG00000122295	ENSSSAG00000118544	ENSSSAG00000010284	ENSSSAG00000001924	ENSSSAG00000113294	KCNIP2 (ENSSSAG00000087854)	armh3 (ENSSSAG00000093253)	LDB1 (ENSSSAG00000079983)	ENSSSAG00000061426	si:dkey-93h22.8 (ENSSSAG00000000432)	cant1b (ENSSSAG00000001450) #9	afmid (ENSSSAG00000001106) #21	tk1 (ENSSSAG00000001109) #22	ENSSSAG00000008686	ENSSSAG00000100606	ENSSSAG00000116234	tmc8 (ENSSSAG00000085350) #26	TMC6 (ENSSSAG00000082590) #27	ENSSSAG00000000409	ENSSSAG00000118003	ENSSSAG00000008650	ENSSSAG00000008602	ENSSSAG00000093391	ENSSSAG00000001250	SIRT7 (ENSSSAG00000000805)	ENSSSAG00000106993	ENSSSAG00000088334	pcyt2 (ENSSSAG00000118534)
Salmo	ANCESTRAL SPECIES	109									ENSGT00940000157798.b.f.b.b	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183127.c.b.d.a.a.a.f.a	ENSGT00940000161847.b.a.e.a.b.b	ENSGT00950000183137.a.l.c	ENSGT00390000011093.d.b.b.a #21	ENSGT00390000011309.v #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B.c	ENSGT00530000069282.B.d	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a.f.a #27	ENSGT00390000015892.a.c	ENSGT00940000156853.o	ENSGT00940000156853.p.a.b	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b	ENSGT00940000160070.b.c.b.a	ENSGT00940000159703.e	ENSGT00550000075065.b.e.b.a	ENSGT00940000164753.b.c
River trout	MODERN SPECIES	5	ENSSTUG00000037495	ENSSTUG00000037506	ENSSTUG00000037509	ENSSTUG00000037522	ARHGAP19 (ENSSTUG00000037598)	ENSSTUG00000037618	KCNIP2 (ENSSTUG00000037663)	ldb1b (ENSSTUG00000037683)	ENSSTUG00000037824	ENSSTUG00000037834	ENSSTUG00000037845	si:dkey-93h22.8 (ENSSTUG00000037850)	ENSSTUG00000037856	cant1b (ENSSTUG00000037894) #9	afmid (ENSSTUG00000037919) #21	tk1 (ENSSTUG00000002230) #22	syngr2b (ENSSTUG00000002456) #24	ENSSTUG00000002576	ENSSTUG00000002608	MAFG (ENSSTUG00000002750)	ENSSTUG00000002762	SIRT7 (ENSSTUG00000002794)	ENSSTUG00000002870	pcyt2 (ENSSTUG00000002964)	gnav1 (ENSSTUG00000004123)	npb (ENSSTUG00000004173)	sgsh (ENSSTUG00000004204)	slc26a11 (ENSSTUG00000004351)	ENSSTUG00000004566	ENSSTUG00000004577	ENSSTUG00000004592
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000112597	ENSSSAG00000118680	ENSSSAG00000113084	ENSSSAG00000103983	ENSSSAG00000095336	ENSSSAG00000001426	ARMH3 (ENSSSAG00000009412)	ENSSSAG00000109291	ENSSSAG00000087614	ENSSSAG00000008825	ENSSSAG00000085531	ENSSSAG00000008769	ENSSSAG00000008255	ENSSSAG00000101100	afmid (ENSSSAG00000092740) #21	tk1 (ENSSSAG00000096487) #22	ENSSSAG00000094473	ENSSSAG00000095018	ENSSSAG00000090525 #26	TMC8 (ENSSSAG00000001112) #26	TMC6 (ENSSSAG00000096361) #27	ENSSSAG00000083811	ENSSSAG00000088117	ENSSSAG00000097938	MAFG (ENSSSAG00000101008)	ENSSSAG00000087773	SIRT7 (ENSSSAG00000100338)	ENSSSAG00000099452	pcyt2 (ENSSSAG00000000721)	gnav1 (ENSSSAG00000107274)	npb (ENSSSAG00000000901)
Oncorhynchus	ANCESTRAL SPECIES	78	ENSGT00940000157525.a.d	ENSGT00530000063604.A.d.a	ENSGT00730000111173.h	ENSGT00940000162611.a.a.a.a	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT01010000222294.c.b.b.b.c.a.a.a.b	ENSGT00970000194718.b.b.a.b.b	ENSGT00940000157798.b.e	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00390000012872.b.e.a #9	ENSGT00390000011093.d.b.a #21	ENSGT00390000011309 #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00530000069282.A	ENSGT01050000244894.a.a.a.b #26	ENSGT01050000244894.b.b.d.a.f.a #27	ENSGT00390000015892.a.c	ENSGT00940000156853.o	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b.e.a
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000051236	ENSOMYG00000009654	ENSOMYG00000055886	KCNIP2 (ENSOMYG00000048087)	ENSOMYG00000075143	armh3 (ENSOMYG00000077014)	ENSOMYG00000061320	ldb1b (ENSOMYG00000050962)	ENSOMYG00000075139	ENSOMYG00000033152	ENSOMYG00000049938	ENSOMYG00000058282	ENSOMYG00000055952	cant1b (ENSOMYG00000032754) #9	ENSOMYG00000075825 #21	tk1 (ENSOMYG00000007441) #22	syngr2b (ENSOMYG00000007365) #24	ENSOMYG00000070824	ENSOMYG00000058212	TMC8 (ENSOMYG00000050653) #26	ENSOMYG00000049986	ENSOMYG00000055770	ENSOMYG00000064185	ENSOMYG00000072704	ENSOMYG00000069950	ENSOMYG00000056598	MAFG (ENSOMYG00000051962)	ENSOMYG00000067456	SIRT7 (ENSOMYG00000032563)	ENSOMYG00000073476	pcyt2 (ENSOMYG00000032532)
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000061575	ENSOMYG00000076634	ENSOMYG00000051297	ENSOMYG00000056856	ENSOMYG00000049822	ENSOMYG00000070917	ENSOMYG00000059257	ENSOMYG00000007016	ENSOMYG00000073032	ENSOMYG00000059644	ENSOMYG00000049820	ENSOMYG00000069738	ENSOMYG00000065935	cant1b (ENSOMYG00000051240) #9	afmid (ENSOMYG00000032736) #21	tk1 (ENSOMYG00000048545) #22	syngr2b (ENSOMYG00000032716) #24	ENSOMYG00000067672	TMC8 (ENSOMYG00000068756) #26	TMC6 (ENSOMYG00000075433) #27	ENSOMYG00000068486	ENSOMYG00000051828	ENSOMYG00000007321	ENSOMYG00000052089	ENSOMYG00000066413	ENSOMYG00000057056	MAFG (ENSOMYG00000048459)	ENSOMYG00000059393	SIRT7 (ENSOMYG00000032578)	ENSOMYG00000007859	pcyt2 (ENSOMYG00000048121)
Oncorhynchus_a	DUPLICATION
Oncorhynchus_a	ANCESTRAL SPECIES	228							ENSGT00970000194718.b.b.a.b.b	ENSGT00940000157798.b.e	ENSGT00390000002554	ENSGT00390000005639.a.b.d.b	ENSGT00950000183127.c.b.d.a.a.a.e.a	ENSGT00950000183137.a.l	ENSGT00390000007726.a.b	ENSGT00390000012872.b.e.b #9	ENSGT00390000011093.d.a #21	ENSGT00390000011309.y #22
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	893															ENSOKIG00005023036	tk1 (ENSOKIG00005023071) #22
Coho salmon	MODERN SPECIES	30	lgals2b (ENSOKIG00005047829)	GTPBP1 (ENSOKIG00005047855)	ELFN2 (ENSOKIG00005047897)	ENSOKIG00005047910	sult3st4 (ENSOKIG00005047919)	ENSOKIG00005047946	man2b1 (ENSOKIG00005047985)	TRMT1 (ENSOKIG00005048133)	NACC1 (ENSOKIG00005048150)	ENSOKIG00005048157	ENSOKIG00005048171	ENSOKIG00005048188	ENSOKIG00005048196	cant1b (ENSOKIG00005038676) #9	afmid (ENSOKIG00005038682) #21	tk1 (ENSOKIG00005038695) #22	syngr2b (ENSOKIG00005038751) #24	ENSOKIG00005038782	ENSOKIG00005038805	ENSOKIG00005038827	ENSOKIG00005038834 #27	NOTUM (ENSOKIG00005038878)	aspscr1 (ENSOKIG00005039557)	ENSOKIG00005039576	ENSOKIG00005039624	MAFG (ENSOKIG00005039749)	SIRT7 (ENSOKIG00005039757)	ENSOKIG00005039808	pcyt2 (ENSOKIG00005039832)	gnav1 (ENSOKIG00005040477)	npb (ENSOKIG00005040494)
Oncorhynchus_a	ANCESTRAL SPECIES	156																ENSGT00390000011309.z #22	ENSGT00950000182935.B.a.c #24	ENSGT00530000069282.B	ENSGT00940000156853.o	ENSGT00950000182933.A.a.b	ENSGT00950000183044.a.a.a.b.f	ENSGT00940000160070.b.c.b.b	ENSGT00940000159703.h	ENSGT00550000075065.b.e.b	ENSGT00940000164753.b	ENSGT00940000158204.d.c.a.b	ENSGT00390000013080.k.c	ENSGT01070000253775.b.k.a	ENSGT01100000263495.A.a.a	ENSGT00950000182774.a.a.a	ENSGT00940000156038.a.a.d.b.b.b.b
Chinook salmon	MODERN SPECIES	1590																tk1 (ENSOTSG00005020512) #22
Coho salmon	MODERN SPECIES	1449																ENSOKIG00005031654 #22	syngr2b (ENSOKIG00005031693) #24	ENSOKIG00005031705	ENSOKIG00005031726	ENSOKIG00005031740	TMC6 (ENSOKIG00005031757) #27	NOTUM (ENSOKIG00005032054)	ENSOKIG00005032463
Huchen	DUPLICATION
Huchen	DUPLICATION
Huchen	MODERN SPECIES	4265											ENSHHUG00000045683	ENSHHUG00000045675	ENSHHUG00000045664	cant1b (ENSHHUG00000045653) #9	afmid (ENSHHUG00000045615) #21	tk1 (ENSHHUG00000045599) #22	syngr2b (ENSHHUG00000045584) #24
Huchen	MODERN SPECIES	4159										ENSHHUG00000037564	ENSHHUG00000037561	ENSHHUG00000037556	ENSHHUG00000037550	cant1b (ENSHHUG00000037546) #9	afmid (ENSHHUG00000037530) #21	tk1 (ENSHHUG00000037523) #22
Huchen	MODERN SPECIES	11411																ENSHHUG00000015461 #22
Elephant shark	MODERN SPECIES	1495	kcnj2a (ENSCMIG00000019206)	KCNJ16 (ENSCMIG00000019207)	map2k6 (ENSCMIG00000019208)	COG1 (ENSCMIG00000019218)	cant1a (ENSCMIG00000019226) #9	usp36 (ENSCMIG00000019227) ##13	cyth1b (ENSCMIG00000019347) #14	ENSCMIG00000019505	DNAH17 (ENSCMIG00000019525) #15	PGS1 (ENSCMIG00000019545) #16	socs3b (ENSCMIG00000019549) #17	tha1 (ENSCMIG00000019551) #18	ENSCMIG00000019553 #19	BIRC5 (ENSCMIG00000019557) #20	afmid (ENSCMIG00000019562) #21	tk1 (ENSCMIG00000019566) #22	SYNGR2 (ENSCMIG00000019572) #24	ENSCMIG00000019574	ENSCMIG00000019575	gprc5c (ENSCMIG00000019577)	GPR142 (ENSCMIG00000019578)	BTBD17 (ENSCMIG00000019579)	rnf213a (ENSCMIG00000019588)	ENDOV (ENSCMIG00000019602)	RPTOR (ENSCMIG00000019618)	chmp6b (ENSCMIG00000019636)	baiap2a (ENSCMIG00000019638)	AATK (ENSCMIG00000019642)	ENSCMIG00000019648	ENSCMIG00000019650	ENSCMIG00000019654
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00390000011309 #22
Hagfish	MODERN SPECIES	156				ENSEBUG00000006543	ENSEBUG00000012628	ENSEBUG00000012050	KIAA0319L (ENSEBUG00000003864)	TPO (ENSEBUG00000009242)	eipr1 (ENSEBUG00000005614)	TRAPPC12 (ENSEBUG00000015710)	ENSEBUG00000001470	ENSEBUG00000014403	ENSEBUG00000008328	ENSEBUG00000003593	ENSEBUG00000016200	ENSEBUG00000007653 #22
Ciona	ANCESTRAL SPECIES																	ENSGT00390000011309 #22
Ciona intestinalis	MODERN SPECIES	10	ENSCING00000015986	ENSCING00000015984	ENSCING00000005841	ENSCING00000005845	ENSCING00000010806	ENSCING00000023481	ENSCING00000016195	ENSCING00000005771	ENSCING00000016188	ENSCING00000022607	ENSCING00000022240	ENSCING00000016202	ENSCING00000000496	ENSCING00000020485	ENSCING00000024742	ENSCING00000021067 #22	ENSCING00000021185	ENSCING00000020150	ENSCING00000016204	ENSCING00000005748	ENSCING00000005742	ENSCING00000021643	ENSCING00000005746	ENSCING00000016216	ENSCING00000003313	ENSCING00000019725
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00390000011309 #22
Caenorhabditis elegans	MODERN SPECIES	3	ugt-59 (WBGene00011238)	gkow-1 (WBGene00011237)	R11A8.1 (WBGene00011236)	Y43C5B.2 (WBGene00012785)	Y43C5B.3 (WBGene00012786)	unc-43 (WBGene00006779)	R09E10.1 (WBGene00011171)	R09E10.2 (WBGene00011172)	acs-18 (WBGene00011173)	R09E10.8 (WBGene00011177)	R09E10.5 (WBGene00011175)	R09E10.13 (WBGene00194658)	R09E10.6 (WBGene00011176)	ebax-1 (WBGene00004140)	rad-51 (WBGene00004297)	thk-1 (WBGene00006568) #22	Y43C5A.4 (WBGene00012784)	Y43C5A.7 (WBGene00044922)	Y43C5A.3 (WBGene00012783)	Y43C5A.2 (WBGene00012782)	nspd-7 (WBGene00012781)	F01G10.9 (WBGene00008511)	daf-14 (WBGene00000910)	F01G10.10 (WBGene00008512)	tkt-1 (WBGene00008506)	lipl-7 (WBGene00008510)	ech-8 (WBGene00001157)	ech-9 (WBGene00001158)	F01G10.4 (WBGene00008507)	F01G10.5 (WBGene00008508)	F01G10.6 (WBGene00008509)