Euteleostomi	ANCESTRAL SPECIES	494										ENSGT00390000002089.a.a.b	ENSGT01000000214440.C	ENSGT00390000015119	ENSGT00640000091486.a	ENSGT00940000171321	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23
Sarcopterygii	ANCESTRAL SPECIES	434										ENSGT00940000159589	ENSGT01030000234573.B.c.b.b	ENSGT00640000091486.a	ENSGT00510000048151	ENSGT00940000171321	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23
Tetrapoda	ANCESTRAL SPECIES	269												ENSGT00640000091486.a	ENSGT00390000012589	ENSGT00940000171321	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23
Amniota	ANCESTRAL SPECIES	93	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00900000143485	ENSGT00940000155293.b	ENSGT00940000161064	ENSGT00940000158735	ENSGT00940000160644	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00640000091486.a	ENSGT00390000012589	ENSGT00940000171321	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT01090000260186
Mammalia	ANCESTRAL SPECIES	51	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00940000157004.b	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000157004.a.a
Theria	ANCESTRAL SPECIES	8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00940000157004.b	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00940000171135 #31	ENSGT00940000153433.B.b	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00940000165892	ENSGT00940000160539 #35
Eutheria	ANCESTRAL SPECIES	3	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Primates	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Haplorrhini	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Simiiformes	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Catarrhini	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Cercopithecidae	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Rhinopithecus	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941.m #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.o #28	ENSGT00390000009268.c #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Black snub-nosed monkey	MODERN SPECIES	122	CDCA5 (ENSRBIG00000027940) #7	NAALADL1 (ENSRBIG00000038203) #8	SNX15 (ENSRBIG00000014174) #9	ENSRBIG00000041751 #10	BATF2 (ENSRBIG00000043496) #11	MAJIN (ENSRBIG00000039146) #12	GPHA2 (ENSRBIG00000032044) #13	PPP2R5B (ENSRBIG00000030847) #14	ATG2A (ENSRBIG00000044659) #15	EHD1 (ENSRBIG00000039111) #16	CDC42BPG (ENSRBIG00000040661) #17	MEN1 (ENSRBIG00000030960) #18	MAP4K2 (ENSRBIG00000042489) #19	SF1 (ENSRBIG00000042818) #20	PYGM (ENSRBIG00000032806) #21	RASGRP2 (ENSRBIG00000040699) #22	NRXN2 (ENSRBIG00000044691) #23	SLC22A12 (ENSRBIG00000039478) #24	SLC22A11 (ENSRBIG00000028306) #25	RPS6KA4 (ENSRBIG00000040205) #26	CCDC88B (ENSRBIG00000041460) #27	ENSRBIG00000028781 #28	ENSRBIG00000042875 #29	ESRRA (ENSRBIG00000034658) #30	ENSRBIG00000041694 #31	KCNK4 (ENSRBIG00000036849) #32	GPR137 (ENSRBIG00000038631) #33	BAD (ENSRBIG00000044217) #34	PLCB3 (ENSRBIG00000035714) #35	ENSRBIG00000022403 #36	FKBP2 (ENSRBIG00000027285) #37
Golden snub-nosed monkey	MODERN SPECIES	689																RASGRP2 (ENSRROG00000016261) #22	NRXN2 (ENSRROG00000032200) #23	SLC22A12 (ENSRROG00000029881) #24	SLC22A11 (ENSRROG00000040186) #25	RPS6KA4 (ENSRROG00000040388) #26	CCDC88B (ENSRROG00000045197) #27	ENSRROG00000021557 #28	TRMT112 (ENSRROG00000044424) #29	ESRRA (ENSRROG00000039613) #30	CATSPERZ (ENSRROG00000028687)	KCNK4 (ENSRROG00000029775) #32	GPR137 (ENSRROG00000037712) #33	BAD (ENSRROG00000034055) #34	PLCB3 (ENSRROG00000033756) #35	PPP1R14B (ENSRROG00000044431) ##36	FKBP2 (ENSRROG00000039908) #37
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c.a.b #29	ENSGT00940000160341.a #30	ENSGT00390000009268.c.a.a #29	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36
Vervet Monkey	MODERN SPECIES		NAALADL1 (ENSCSAG00000007598) #8	SAC3D1 (ENSCSAG00000007587)	SNX15 (ENSCSAG00000007577) #9	ARL2 (ENSCSAG00000007569) #10	BATF2 (ENSCSAG00000007552) #11	MAJIN (ENSCSAG00000007545) #12	GPHA2 (ENSCSAG00000007525) #13	PPP2R5B (ENSCSAG00000007520) #14	ATG2A (ENSCSAG00000007480) #15	EHD1 (ENSCSAG00000007397) #16	CDC42BPG (ENSCSAG00000007393) #17	MEN1 (ENSCSAG00000007380) #18	MAP4K2 (ENSCSAG00000007341) #19	SF1 (ENSCSAG00000007258) #20	PYGM (ENSCSAG00000007250) #21	RASGRP2 (ENSCSAG00000007242) #22	NRXN2 (ENSCSAG00000007237) #23	SLC22A12 (ENSCSAG00000007232) #24	SLC22A11 (ENSCSAG00000007227) #25	RPS6KA4 (ENSCSAG00000007216) #26	CCDC88B (ENSCSAG00000007206) #27	PRDX5 (ENSCSAG00000007195) #28	ESRRA (ENSCSAG00000007192) #30	ENSCSAG00000007187 #29	CATSPERZ (ENSCSAG00000007181)	KCNK4 (ENSCSAG00000007170) #32	GPR137 (ENSCSAG00000007157) #33	BAD (ENSCSAG00000007151) #34	PLCB3 (ENSCSAG00000007117) #35	PPP1R14B (ENSCSAG00000007003) ##36	FKBP2 (ENSCSAG00000007000) #37
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c.a.b #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Macaca	ANCESTRAL SPECIES	2	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c.a.b #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Pig-tailed macaque	MODERN SPECIES	433	NAALADL1 (ENSMNEG00000028607) #8	SAC3D1 (ENSMNEG00000013099)	SNX15 (ENSMNEG00000043097) #9	ARL2 (ENSMNEG00000001420) #10	BATF2 (ENSMNEG00000015572) #11	MAJIN (ENSMNEG00000036399) #12	GPHA2 (ENSMNEG00000041501) #13	PPP2R5B (ENSMNEG00000037938) #14	ATG2A (ENSMNEG00000039731) #15	EHD1 (ENSMNEG00000031673) #16	CDC42BPG (ENSMNEG00000038374) #17	MEN1 (ENSMNEG00000033532) #18	MAP4K2 (ENSMNEG00000026570) #19	SF1 (ENSMNEG00000037901) #20	PYGM (ENSMNEG00000019869) #21	RASGRP2 (ENSMNEG00000023432) #22	NRXN2 (ENSMNEG00000043644) #23	ENSMNEG00000036100 #24	SLC22A11 (ENSMNEG00000029979) #25	RPS6KA4 (ENSMNEG00000032025) #26	CCDC88B (ENSMNEG00000033453) #27	PRDX5 (ENSMNEG00000028092) #28	TRMT112 (ENSMNEG00000013487) #29	ESRRA (ENSMNEG00000027151) #30	CATSPERZ (ENSMNEG00000039355)	KCNK4 (ENSMNEG00000040947) #32	GPR137 (ENSMNEG00000044491) #33	BAD (ENSMNEG00000044675) #34	PLCB3 (ENSMNEG00000028331) #35	ENSMNEG00000045463 ##36	FKBP2 (ENSMNEG00000025167) #37
Macaca_a	ANCESTRAL SPECIES	3	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c.a.b #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Crab-eating macaque	MODERN SPECIES	5	SNX15 (ENSMFAG00000041800) #9	ARL2 (ENSMFAG00000041098) #10	ENSMFAG00000058212	BATF2 (ENSMFAG00000039278) #11	ENSMFAG00000062313	MAJIN (ENSMFAG00000001100) #12	GPHA2 (ENSMFAG00000040663) #13	PPP2R5B (ENSMFAG00000041875) #14	ATG2A (ENSMFAG00000002767) #15	EHD1 (ENSMFAG00000032608) #16	CDC42BPG (ENSMFAG00000046402) #17	MEN1 (ENSMFAG00000037342) #18	MAP4K2 (ENSMFAG00000033749) #19	SF1 (ENSMFAG00000033122) #20	PYGM (ENSMFAG00000039378) #21	RASGRP2 (ENSMFAG00000019272) #22	NRXN2 (ENSMFAG00000037048) #23	SLC22A12 (ENSMFAG00000001521) #24	SLC22A11 (ENSMFAG00000057775) #25	ENSMFAG00000065728	ENSMFAG00000036152 #26	ENSMFAG00000030420 #27	PRDX5 (ENSMFAG00000033198) #28	TRMT112 (ENSMFAG00000044258) #29	ESRRA (ENSMFAG00000035878) #30	CATSPERZ (ENSMFAG00000002264)	KCNK4 (ENSMFAG00000053969) #32	FKBP2 (ENSMFAG00000002773) #37	GPR137 (ENSMFAG00000041235) #33	BAD (ENSMFAG00000035492) #34	PLCB3 (ENSMFAG00000044872) #35
Rhesus	MODERN SPECIES	5	SAC3D1 (ENSMMUG00000031168)	SNX15 (ENSMMUG00000012320) #9	ARL2 (ENSMMUG00000041388) #10	ENSMMUG00000062265	BATF2 (ENSMMUG00000006568) #11	MAJIN (ENSMMUG00000031163) #12	GPHA2 (ENSMMUG00000003976) #13	PPP2R5B (ENSMMUG00000041101) #14	ATG2A (ENSMMUG00000003973) #15	EHD1 (ENSMMUG00000003972) #16	CDC42BPG (ENSMMUG00000003971) #17	MEN1 (ENSMMUG00000031160) #18	MAP4K2 (ENSMMUG00000030597) #19	SF1 (ENSMMUG00000022606) #20	PYGM (ENSMMUG00000022604) #21	RASGRP2 (ENSMMUG00000022598) #22	NRXN2 (ENSMMUG00000022595) #23	SLC22A12 (ENSMMUG00000022594) #24	RPS6KA4 (ENSMMUG00000007610) #26	CCDC88B (ENSMMUG00000007603) #27	PRDX5 (ENSMMUG00000013397) #28	TRMT112 (ENSMMUG00000019647) #29	ESRRA (ENSMMUG00000017803) #30	CATSPERZ (ENSMMUG00000037770)	KCNK4 (ENSMMUG00000017802) #32	GPR137 (ENSMMUG00000010390) #33	BAD (ENSMMUG00000060596) #34	PLCB3 (ENSMMUG00000012948) #35	ENSMMUG00000037977 ##36	FKBP2 (ENSMMUG00000048072) #37	VEGFB (ENSMMUG00000012944)
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c.a.b #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Olive baboon	MODERN SPECIES	3	ZFPL1 (ENSPANG00000006241)	CDCA5 (ENSPANG00000015655) #7	ENSPANG00000042098	SNX15 (ENSPANG00000013648) #9	ARL2 (ENSPANG00000012184) #10	BATF2 (ENSPANG00000032555) #11	MAJIN (ENSPANG00000004413) #12	GPHA2 (ENSPANG00000026212) #13	PPP2R5B (ENSPANG00000004341) #14	ATG2A (ENSPANG00000002370) #15	EHD1 (ENSPANG00000023120) #16	CDC42BPG (ENSPANG00000016554) #17	MEN1 (ENSPANG00000004747) #18	SF1 (ENSPANG00000020754) #20	PYGM (ENSPANG00000011408) #21	RASGRP2 (ENSPANG00000010911) #22	NRXN2 (ENSPANG00000004471) #23	SLC22A12 (ENSPANG00000009833) #24	SLC22A11 (ENSPANG00000017442) #25	RPS6KA4 (ENSPANG00000003107) #26	CCDC88B (ENSPANG00000016980) #27	PRDX5 (ENSPANG00000033997) #28	ENSPANG00000035234 #29	ESRRA (ENSPANG00000024911) #30	CATSPERZ (ENSPANG00000013727)	KCNK4 (ENSPANG00000018628) #32	GPR137 (ENSPANG00000016423) #33	ENSPANG00000012183	ENSPANG00000012133 ##36	FKBP2 (ENSPANG00000031845) #37	VEGFB (ENSPANG00000003693)
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c.a.b #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j.g.b ##36	ENSGT00940000157074 #37
Drill	MODERN SPECIES	1111	ENSMLEG00000030910	ENSMLEG00000021443 #9	SNX15 (ENSMLEG00000008176) #9	ARL2 (ENSMLEG00000044379) #10	BATF2 (ENSMLEG00000044378) #11	MAJIN (ENSMLEG00000031869) #12	GPHA2 (ENSMLEG00000030143) #13	PPP2R5B (ENSMLEG00000041445) #14	ATG2A (ENSMLEG00000032438) #15	EHD1 (ENSMLEG00000031992) #16	CDC42BPG (ENSMLEG00000028931) #17	MEN1 (ENSMLEG00000035087) #18	MAP4K2 (ENSMLEG00000039229) #19	SF1 (ENSMLEG00000040706) #20	PYGM (ENSMLEG00000033335) #21	RASGRP2 (ENSMLEG00000042156) #22	NRXN2 (ENSMLEG00000036031) #23	SLC22A12 (ENSMLEG00000022071) #24	SLC22A11 (ENSMLEG00000043533) #25	RPS6KA4 (ENSMLEG00000030486) #26	CCDC88B (ENSMLEG00000037123) #27	PRDX5 (ENSMLEG00000036362) #28	TRMT112 (ENSMLEG00000017888) #29	ESRRA (ENSMLEG00000035857) #30	CATSPERZ (ENSMLEG00000026650)	KCNK4 (ENSMLEG00000026790) #32	GPR137 (ENSMLEG00000028909) #33	BAD (ENSMLEG00000015467) #34	PLCB3 (ENSMLEG00000043541) #35	ENSMLEG00000039492 ##36	FKBP2 (ENSMLEG00000040653) #37
Sooty mangabey	MODERN SPECIES	518	NAALADL1 (ENSCATG00000044328) #8	SAC3D1 (ENSCATG00000035603)	SNX15 (ENSCATG00000015131) #9	ARL2 (ENSCATG00000028839) #10	BATF2 (ENSCATG00000000846) #11	ENSCATG00000002772 #12	GPHA2 (ENSCATG00000017573) #13	PPP2R5B (ENSCATG00000044428) #14	ATG2A (ENSCATG00000033053) #15	EHD1 (ENSCATG00000010658) #16	CDC42BPG (ENSCATG00000001970) #17	MEN1 (ENSCATG00000015333) #18	MAP4K2 (ENSCATG00000019208) #19	SF1 (ENSCATG00000011564) #20	PYGM (ENSCATG00000034886) #21	RASGRP2 (ENSCATG00000042628) #22	NRXN2 (ENSCATG00000038140) #23	SLC22A12 (ENSCATG00000043695) #24	SLC22A11 (ENSCATG00000033115) #25	RPS6KA4 (ENSCATG00000032072) #26	CCDC88B (ENSCATG00000030984) #27	PRDX5 (ENSCATG00000036341) #28	ENSCATG00000037611 #29	ESRRA (ENSCATG00000027912) #30	CATSPERZ (ENSCATG00000033568)	KCNK4 (ENSCATG00000030913) #32	GPR137 (ENSCATG00000033477) #33	BAD (ENSCATG00000033143) #34	PLCB3 (ENSCATG00000031941) #35	ENSCATG00000038370 ##36	FKBP2 (ENSCATG00000039463) #37
Hominoidea	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Hominidae	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Pan	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.c #29	ENSGT00940000160341.a #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b.j ##36	ENSGT00940000157074 #37
Bonobo	MODERN SPECIES	2	NAALADL1 (ENSPPAG00000043800) #8	ENSPPAG00000041034	SNX15 (ENSPPAG00000036705) #9	ARL2 (ENSPPAG00000041696) #10	BATF2 (ENSPPAG00000036342) #11	MAJIN (ENSPPAG00000000163) #12	GPHA2 (ENSPPAG00000033206) #13	PPP2R5B (ENSPPAG00000032645) #14	ATG2A (ENSPPAG00000026591) #15	EHD1 (ENSPPAG00000037178) #16	CDC42BPG (ENSPPAG00000030945) #17	MEN1 (ENSPPAG00000027099) #18	MAP4K2 (ENSPPAG00000025939) #19	SF1 (ENSPPAG00000002799) #20	PYGM (ENSPPAG00000029640) #21	RASGRP2 (ENSPPAG00000039616) #22	NRXN2 (ENSPPAG00000029883) #23	SLC22A12 (ENSPPAG00000031436) #24	SLC22A11 (ENSPPAG00000034000) #25	RPS6KA4 (ENSPPAG00000029347) #26	CCDC88B (ENSPPAG00000032401) #27	PRDX5 (ENSPPAG00000031356) #28	TRMT112 (ENSPPAG00000039858) #29	ESRRA (ENSPPAG00000036778) #30	CATSPERZ (ENSPPAG00000044018)	KCNK4 (ENSPPAG00000021765) #32	ENSPPAG00000039521 #33	BAD (ENSPPAG00000000858) #34	PLCB3 (ENSPPAG00000040477) #35	ENSPPAG00000022401 ##36	FKBP2 (ENSPPAG00000036913) #37
Chimpanzee	MODERN SPECIES	2	NAALADL1 (ENSPTRG00000003859) #8	SAC3D1 (ENSPTRG00000003858)	SNX15 (ENSPTRG00000003857) #9	ARL2 (ENSPTRG00000034478) #10	BATF2 (ENSPTRG00000003856) #11	MAJIN (ENSPTRG00000003855) #12	GPHA2 (ENSPTRG00000003854) #13	PPP2R5B (ENSPTRG00000003853) #14	ATG2A (ENSPTRG00000003852) #15	EHD1 (ENSPTRG00000003851) #16	CDC42BPG (ENSPTRG00000003849) #17	MEN1 (ENSPTRG00000003848) #18	MAP4K2 (ENSPTRG00000003847) #19	SF1 (ENSPTRG00000003846) #20	PYGM (ENSPTRG00000003845) #21	RASGRP2 (ENSPTRG00000003844) #22	NRXN2 (ENSPTRG00000003843) #23	SLC22A12 (ENSPTRG00000003841) #24	SLC22A11 (ENSPTRG00000023703) #25	RPS6KA4 (ENSPTRG00000003839) #26	CCDC88B (ENSPTRG00000003836) #27	PRDX5 (ENSPTRG00000003835) #28	TRMT112 (ENSPTRG00000003834) #29	ESRRA (ENSPTRG00000003833) #30	KCNK4 (ENSPTRG00000003832) #32	GPR137 (ENSPTRG00000003831) #33	BAD (ENSPTRG00000003830) #34	PLCB3 (ENSPTRG00000003828) #35	PPP1R14B (ENSPTRG00000041138) ##36	FKBP2 (ENSPTRG00000003826) #37	VEGFB (ENSPTRG00000003825)
Human	MODERN SPECIES	2	NAALADL1 (ENSG00000168060) #8	SAC3D1 (ENSG00000168061)	SNX15 (ENSG00000110025) #9	ARL2 (ENSG00000213465) #10	BATF2 (ENSG00000168062) #11	MAJIN (ENSG00000168070) #12	GPHA2 (ENSG00000149735) #13	PPP2R5B (ENSG00000068971) #14	ATG2A (ENSG00000110046) #15	EHD1 (ENSG00000110047) #16	CDC42BPG (ENSG00000171219) #17	MEN1 (ENSG00000133895) #18	MAP4K2 (ENSG00000168067) #19	SF1 (ENSG00000168066) #20	PYGM (ENSG00000068976) #21	RASGRP2 (ENSG00000068831) #22	NRXN2 (ENSG00000110076) #23	SLC22A12 (ENSG00000197891) #24	SLC22A11 (ENSG00000168065) #25	RPS6KA4 (ENSG00000162302) #26	CCDC88B (ENSG00000168071) #27	PRDX5 (ENSG00000126432) #28	TRMT112 (ENSG00000173113) #29	ESRRA (ENSG00000173153) #30	CATSPERZ (ENSG00000219435)	KCNK4 (ENSG00000182450) #32	GPR137 (ENSG00000173264) #33	BAD (ENSG00000002330) #34	PLCB3 (ENSG00000149782) #35	PPP1R14B (ENSG00000173457) ##36	ENSG00000286264
Gorilla	MODERN SPECIES	2	CDCA5 (ENSGGOG00000026067) #7	NAALADL1 (ENSGGOG00000002695) #8	SAC3D1 (ENSGGOG00000024890)	SNX15 (ENSGGOG00000010421) #9	ARL2 (ENSGGOG00000005254) #10	BATF2 (ENSGGOG00000025989) #11	ENSGGOG00000000363 #12	GPHA2 (ENSGGOG00000000362) #13	PPP2R5B (ENSGGOG00000000359) #14	ATG2A (ENSGGOG00000043634) #15	EHD1 (ENSGGOG00000000355) #16	CDC42BPG (ENSGGOG00000000352) #17	MEN1 (ENSGGOG00000002975) #18	MAP4K2 (ENSGGOG00000002968) #19	PYGM (ENSGGOG00000012733) #21	RASGRP2 (ENSGGOG00000012695) #22	NRXN2 (ENSGGOG00000003597) #23	SLC22A12 (ENSGGOG00000003591) #24	SLC22A11 (ENSGGOG00000011450) #25	ENSGGOG00000004129 #27	PRDX5 (ENSGGOG00000001337) #28	TRMT112 (ENSGGOG00000001334) #29	ESRRA (ENSGGOG00000001333) #30	CATSPERZ (ENSGGOG00000001331)	KCNK4 (ENSGGOG00000001329) #32	ENSGGOG00000012259 #33	BAD (ENSGGOG00000012256) #34	PLCB3 (ENSGGOG00000012218) #35	ENSGGOG00000012211 ##36	FKBP2 (ENSGGOG00000012201) #37	ENSGGOG00000012193
Orangutan	MODERN SPECIES	2	NAALADL1 (ENSPPYG00000003084) #8	SAC3D1 (ENSPPYG00000003085)	ENSPPYG00000003086 #9	ARL2 (ENSPPYG00000038004) #10	BATF2 (ENSPPYG00000031464) #11	MAJIN (ENSPPYG00000003088) #12	ENSPPYG00000003089 #13	PPP2R5B (ENSPPYG00000003090) #14	ATG2A (ENSPPYG00000003091) #15	EHD1 (ENSPPYG00000003093) #16	CDC42BPG (ENSPPYG00000003094) #17	MEN1 (ENSPPYG00000003095) #18	MAP4K2 (ENSPPYG00000003096) #19	SF1 (ENSPPYG00000003098) #20	PYGM (ENSPPYG00000003099) #21	RASGRP2 (ENSPPYG00000029839) #22	NRXN2 (ENSPPYG00000003101) #23	SLC22A12 (ENSPPYG00000003102) #24	SLC22A11 (ENSPPYG00000003103) #25	RPS6KA4 (ENSPPYG00000029624) #26	CCDC88B (ENSPPYG00000003105) #27	ENSPPYG00000003106 #28	ENSPPYG00000025906 #29	ESRRA (ENSPPYG00000003107) #30	CATSPERZ (ENSPPYG00000036817)	KCNK4 (ENSPPYG00000032735) #32	ENSPPYG00000003109 #33	BAD (ENSPPYG00000003110) #34	PLCB3 (ENSPPYG00000003111) #35	ENSPPYG00000035813 ##36	FKBP2 (ENSPPYG00000039319) #37
Gibbon	MODERN SPECIES	19	NAALADL1 (ENSNLEG00000005451) #8	SAC3D1 (ENSNLEG00000005447)	SNX15 (ENSNLEG00000005442) #9	ARL2 (ENSNLEG00000005437) #10	BATF2 (ENSNLEG00000005432) #11	ENSNLEG00000034594 #12	GPHA2 (ENSNLEG00000005414) #13	PPP2R5B (ENSNLEG00000005412) #14	ATG2A (ENSNLEG00000005387) #15	EHD1 (ENSNLEG00000005375) #16	CDC42BPG (ENSNLEG00000005373) #17	MEN1 (ENSNLEG00000005335) #18	ENSNLEG00000005321 #19	SF1 (ENSNLEG00000005236) #20	PYGM (ENSNLEG00000005206) #21	RASGRP2 (ENSNLEG00000005105) #22	NRXN2 (ENSNLEG00000005095) #23	SLC22A12 (ENSNLEG00000005070) #24	ENSNLEG00000005067 #25	RPS6KA4 (ENSNLEG00000005042) #26	ENSNLEG00000005014 #27	ENSNLEG00000005003 #28	TRMT112 (ENSNLEG00000028260) #29	ESRRA (ENSNLEG00000004971) #30	CATSPERZ (ENSNLEG00000004970)	ENSNLEG00000004963	ENSNLEG00000004953 #33	ENSNLEG00000028113	PLCB3 (ENSNLEG00000004895) #35	PPP1R14B (ENSNLEG00000004890) ##36	FKBP2 (ENSNLEG00000004877) #37
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941.k.a #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237.a #18	ENSGT00940000162250 #19	ENSGT00940000157258.m.a #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483.a #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.f #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Cebidae	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941.k.a #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237.a #18	ENSGT00940000162250 #19	ENSGT00940000157258.n #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483.a #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.f #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941.k.a #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237.a #18	ENSGT00940000162250 #19	ENSGT00940000157258.n #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483.a #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.f #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Bolivian squirrel monkey	MODERN SPECIES	136	NAALADL1 (ENSSBOG00000023539) #8	SAC3D1 (ENSSBOG00000003864)	SNX15 (ENSSBOG00000033081) #9	ENSSBOG00000016897 #10	BATF2 (ENSSBOG00000030251) #11	MAJIN (ENSSBOG00000028192) #12	GPHA2 (ENSSBOG00000019908) #13	PPP2R5B (ENSSBOG00000035775) #14	ATG2A (ENSSBOG00000026165) #15	EHD1 (ENSSBOG00000023399) #16	CDC42BPG (ENSSBOG00000023574) #17	MEN1 (ENSSBOG00000027408) #18	MAP4K2 (ENSSBOG00000033358) #19	ENSSBOG00000034770 #20	PYGM (ENSSBOG00000029150) #21	ENSSBOG00000006213 #22	ENSSBOG00000000540	NRXN2 (ENSSBOG00000025465) #23	SLC22A12 (ENSSBOG00000023751) #24	SLC22A11 (ENSSBOG00000016344) #25	ENSSBOG00000028091	RPS6KA4 (ENSSBOG00000031882) #26	CCDC88B (ENSSBOG00000028518) #27	PRDX5 (ENSSBOG00000035300) #28	TRMT112 (ENSSBOG00000023130) #29	ESRRA (ENSSBOG00000021080) #30	ENSSBOG00000022285 #31	KCNK4 (ENSSBOG00000023169) #32	GPR137 (ENSSBOG00000024492) #33	BAD (ENSSBOG00000025943) #34	PLCB3 (ENSSBOG00000035119) #35
Capuchin	MODERN SPECIES	102	NAALADL1 (ENSCCAG00000024559) #8	SAC3D1 (ENSCCAG00000031488)	SNX15 (ENSCCAG00000036827) #9	ENSCCAG00000037394 #10	BATF2 (ENSCCAG00000020443) #11	MAJIN (ENSCCAG00000034835) #12	GPHA2 (ENSCCAG00000029395) #13	PPP2R5B (ENSCCAG00000029393) #14	ATG2A (ENSCCAG00000034615) #15	EHD1 (ENSCCAG00000004590) #16	CDC42BPG (ENSCCAG00000019201) #17	MEN1 (ENSCCAG00000020889) #18	MAP4K2 (ENSCCAG00000021506) #19	ENSCCAG00000037881 #20	PYGM (ENSCCAG00000022826) #21	ENSCCAG00000022664 #22	NRXN2 (ENSCCAG00000025223) #23	SLC22A12 (ENSCCAG00000021030) #24	SLC22A11 (ENSCCAG00000019938) #25	RPS6KA4 (ENSCCAG00000029039) #26	CCDC88B (ENSCCAG00000020244) #27	PRDX5 (ENSCCAG00000032386) #28	ENSCCAG00000028185 #29	ESRRA (ENSCCAG00000020410) #30	CATSPERZ (ENSCCAG00000020720)	KCNK4 (ENSCCAG00000020728) #32	GPR137 (ENSCCAG00000021155) #33	BAD (ENSCCAG00000010421) #34	PLCB3 (ENSCCAG00000015511) #35	PPP1R14B (ENSCCAG00000020283) #36	FKBP2 (ENSCCAG00000032358) #37
Marmoset	MODERN SPECIES	2	CDCA5 (ENSCJAG00000002502) #7	NAALADL1 (ENSCJAG00000002515) #8	SAC3D1 (ENSCJAG00000002527)	SNX15 (ENSCJAG00000002533) #9	CAPN1 (ENSCJAG00000002371)	BATF2 (ENSCJAG00000002550) #11	MAJIN (ENSCJAG00000002554) #12	GPHA2 (ENSCJAG00000073104) #13	PPP2R5B (ENSCJAG00000002574) #14	ATG2A (ENSCJAG00000002632) #15	EHD1 (ENSCJAG00000002660) #16	MEN1 (ENSCJAG00000002716) #18	MAP4K2 (ENSCJAG00000002730) #19	SF1 (ENSCJAG00000002780) #20	PYGM (ENSCJAG00000002836) #21	RASGRP2 (ENSCJAG00000002861) #22	CDC42BPG (ENSCJAG00000002669) #17	NRXN2 (ENSCJAG00000002930) #23	SLC22A12 (ENSCJAG00000002977) #24	SLC22A11 (ENSCJAG00000070574) #25	RPS6KA4 (ENSCJAG00000017957) #26	CCDC88B (ENSCJAG00000017980) #27	ENSCJAG00000086006	ENSCJAG00000018014 #28	TRMT112 (ENSCJAG00000018026) #29	ESRRA (ENSCJAG00000018030) #30	CATSPERZ (ENSCJAG00000018046)	KCNK4 (ENSCJAG00000018060) #32	GPR137 (ENSCJAG00000018062) #33	BAD (ENSCJAG00000018074) #34	PLCB3 (ENSCJAG00000018081) #35
Mas night monkey	MODERN SPECIES	660	NAALADL1 (ENSANAG00000019066) #8	SAC3D1 (ENSANAG00000028461)	SNX15 (ENSANAG00000038358) #9	ENSANAG00000033806 #10	BATF2 (ENSANAG00000032515) #11	MAJIN (ENSANAG00000032059) #12	GPHA2 (ENSANAG00000021802) #13	PPP2R5B (ENSANAG00000036587) #14	ATG2A (ENSANAG00000037033) #15	EHD1 (ENSANAG00000034810) #16	CDC42BPG (ENSANAG00000032225) #17	ENSANAG00000023387 #18	MAP4K2 (ENSANAG00000026809) #19	ENSANAG00000026664 #20	PYGM (ENSANAG00000033338) #21	RASGRP2 (ENSANAG00000026693) #22	NRXN2 (ENSANAG00000028468) #23	SLC22A12 (ENSANAG00000037377) #24	SLC22A11 (ENSANAG00000022036) #25	RPS6KA4 (ENSANAG00000038299) #26	CCDC88B (ENSANAG00000029201) #27	PRDX5 (ENSANAG00000027318) #28	ENSANAG00000021626 #29	ESRRA (ENSANAG00000033891) #30	CATSPERZ (ENSANAG00000033403)	KCNK4 (ENSANAG00000038205) #32	GPR137 (ENSANAG00000033992) #33	BAD (ENSANAG00000032197) #34	PLCB3 (ENSANAG00000032258) #35	ENSANAG00000026105 #36	ENSANAG00000025147 #37
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000160483.b #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000160483.b #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000160483.b #22
Capuchin	MODERN SPECIES	182															TRPC6 (ENSCCAG00000028561)	ENSCCAG00000024505 #22	ENSCCAG00000023247	PGR (ENSCCAG00000026925)	ARHGAP42 (ENSCCAG00000026313)	CNTN5 (ENSCCAG00000020861)	LSM5 (ENSCCAG00000032123)
Bolivian squirrel monkey	MODERN SPECIES	50	MMP27 (ENSSBOG00000003176)	MMP20 (ENSSBOG00000023588)	MMP7 (ENSSBOG00000026550)	ENSSBOG00000029913	BIRC2 (ENSSBOG00000034069)	BIRC3 (ENSSBOG00000031187)	YAP1 (ENSSBOG00000027497)	ENSSBOG00000036077	CFAP300 (ENSSBOG00000033758)	CEP126 (ENSSBOG00000028647)	ANGPTL5 (ENSSBOG00000031015)	ENSSBOG00000032893	TRPC6 (ENSSBOG00000019836)	ENSSBOG00000021319	ENSSBOG00000023108	ENSSBOG00000023277 #22	PGR (ENSSBOG00000013714)	ARHGAP42 (ENSSBOG00000035822)	CNTN5 (ENSSBOG00000023228)	ENSSBOG00000018311	CCDC82 (ENSSBOG00000027897)	MAML2 (ENSSBOG00000031458)	MTMR2 (ENSSBOG00000012973)	CEP57 (ENSSBOG00000030610)	FAM76B (ENSSBOG00000017588)
Tarsier	MODERN SPECIES	3493																RASGRP2 (ENSTSYG00000037591) #22
Strepsirrhini	ANCESTRAL SPECIES	20	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37	ENSGT00940000161844
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37	ENSGT00940000161844
Greater bamboo lemur	MODERN SPECIES	592	ZFPL1 (ENSPSMG00000000835)	CDCA5 (ENSPSMG00000000849) #7	NAALADL1 (ENSPSMG00000000931) #8	SNX15 (ENSPSMG00000001027) #9	ARL2 (ENSPSMG00000001076) #10	BATF2 (ENSPSMG00000001111) #11	GPHA2 (ENSPSMG00000001116) #13	PPP2R5B (ENSPSMG00000001148) #14	ATG2A (ENSPSMG00000001224) #15	EHD1 (ENSPSMG00000001343) #16	CDC42BPG (ENSPSMG00000001439) #17	MEN1 (ENSPSMG00000001519) #18	MAP4K2 (ENSPSMG00000001628) #19	SF1 (ENSPSMG00000001794) #20	PYGM (ENSPSMG00000002155) #21	RASGRP2 (ENSPSMG00000002874) #22	NRXN2 (ENSPSMG00000002989) #23	SLC22A12 (ENSPSMG00000003182) #24
Coquerels sifaka	MODERN SPECIES	124	NAALADL1 (ENSPCOG00000027422) #8	SAC3D1 (ENSPCOG00000026007)	SNX15 (ENSPCOG00000012093) #9	ARL2 (ENSPCOG00000021131) #10	BATF2 (ENSPCOG00000006109) #11	MAJIN (ENSPCOG00000006717) #12	GPHA2 (ENSPCOG00000028460) #13	PPP2R5B (ENSPCOG00000027045) #14	ATG2A (ENSPCOG00000027822) #15	EHD1 (ENSPCOG00000010309) #16	CDC42BPG (ENSPCOG00000005157) #17	MEN1 (ENSPCOG00000021007) #18	MAP4K2 (ENSPCOG00000028440) #19	SF1 (ENSPCOG00000027546) #20	PYGM (ENSPCOG00000004127) #21	RASGRP2 (ENSPCOG00000017062) #22	NRXN2 (ENSPCOG00000006501) #23	SLC22A12 (ENSPCOG00000018089) #24	RPS6KA4 (ENSPCOG00000014786) #26	CCDC88B (ENSPCOG00000016059) #27	PRDX5 (ENSPCOG00000022463) #28	TRMT112 (ENSPCOG00000027044) #29	ESRRA (ENSPCOG00000014809) #30	CATSPERZ (ENSPCOG00000028418)	KCNK4 (ENSPCOG00000013602) #32	GPR137 (ENSPCOG00000020356) #33	BAD (ENSPCOG00000028095) #34	PLCB3 (ENSPCOG00000027858) #35	ENSPCOG00000028120 #36	FKBP2 (ENSPCOG00000014307) #37	VEGFB (ENSPCOG00000015577)
Mouse lemur	MODERN SPECIES	27	NAALADL1 (ENSMICG00000001282) #8	SAC3D1 (ENSMICG00000031764)	SNX15 (ENSMICG00000001273) #9	ARL2 (ENSMICG00000038050) #10	BATF2 (ENSMICG00000001270) #11	MAJIN (ENSMICG00000001268) #12	GPHA2 (ENSMICG00000001265) #13	PPP2R5B (ENSMICG00000001255) #14	ATG2A (ENSMICG00000001241) #15	EHD1 (ENSMICG00000001239) #16	CDC42BPG (ENSMICG00000001223) #17	MEN1 (ENSMICG00000001218) #18	MAP4K2 (ENSMICG00000001208) #19	SF1 (ENSMICG00000001202) #20	PYGM (ENSMICG00000001197) #21	RASGRP2 (ENSMICG00000034620) #22	NRXN2 (ENSMICG00000001185) #23	SLC22A12 (ENSMICG00000008804) #24	RPS6KA4 (ENSMICG00000029334) #26	CCDC88B (ENSMICG00000016989) #27	PRDX5 (ENSMICG00000016988) #28	ENSMICG00000016987 #29	ESRRA (ENSMICG00000016983) #30	CATSPERZ (ENSMICG00000042558)	KCNK4 (ENSMICG00000016981) #32	GPR137 (ENSMICG00000009219) #33	BAD (ENSMICG00000028209) #34	PLCB3 (ENSMICG00000016970) #35	PPP1R14B (ENSMICG00000036134) #36	FKBP2 (ENSMICG00000016960) #37	VEGFB (ENSMICG00000016957)
Bushbaby	MODERN SPECIES	255	NAALADL1 (ENSOGAG00000014969) #8	SAC3D1 (ENSOGAG00000026911)	SNX15 (ENSOGAG00000025283) #9	ARL2 (ENSOGAG00000034816) #10	BATF2 (ENSOGAG00000001363) #11	MAJIN (ENSOGAG00000014965) #12	GPHA2 (ENSOGAG00000014963) #13	PPP2R5B (ENSOGAG00000014960) #14	ATG2A (ENSOGAG00000014598) #15	EHD1 (ENSOGAG00000009351) #16	CDC42BPG (ENSOGAG00000009346) #17	MEN1 (ENSOGAG00000032402) #18	MAP4K2 (ENSOGAG00000034056) #19	SF1 (ENSOGAG00000016196) #20	PYGM (ENSOGAG00000008083) #21	RASGRP2 (ENSOGAG00000016190) #22	NRXN2 (ENSOGAG00000001359) #23	ENSOGAG00000001354 #24	SLC22A11 (ENSOGAG00000011026) #25	RPS6KA4 (ENSOGAG00000007168) #26	CCDC88B (ENSOGAG00000031887) #27	PRDX5 (ENSOGAG00000025702) #28	TRMT112 (ENSOGAG00000013535) #29	ESRRA (ENSOGAG00000033092) #30	KCNK4 (ENSOGAG00000007163) #32	GPR137 (ENSOGAG00000007161) #33	BAD (ENSOGAG00000007160) #34	PLCB3 (ENSOGAG00000007150) #35	PPP1R14B (ENSOGAG00000030926) #36	FKBP2 (ENSOGAG00000028269) #37	VEGFB (ENSOGAG00000007142)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Glires	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Rodentia	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Myomorpha	ANCESTRAL SPECIES	4	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Muroidea	ANCESTRAL SPECIES	2	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Muroidea_A	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Cricetidae	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.k #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Cricetinae	ANCESTRAL SPECIES	2	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.k #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000165892	ENSGT00940000160539 #35	ENSGT00940000157074 #37	ENSGT00940000161844
Golden Hamster	MODERN SPECIES	617	Cdca5 (ENSMAUG00000014137) #7	Naaladl1 (ENSMAUG00000015343) #8	Sac3d1 (ENSMAUG00000015000)	Snx15 (ENSMAUG00000015593) #9	Arl2 (ENSMAUG00000014431) #10	Majin (ENSMAUG00000016453) #12	Gpha2 (ENSMAUG00000014615) #13	Ppp2r5b (ENSMAUG00000014087) #14	Atg2a (ENSMAUG00000016159) #15	Ehd1 (ENSMAUG00000013823) #16	Cdc42bpg (ENSMAUG00000015216) #17	Men1 (ENSMAUG00000014384) #18	Map4k2 (ENSMAUG00000014838) #19	Sf1 (ENSMAUG00000014064) #20	Pygm (ENSMAUG00000014259) #21	Rasgrp2 (ENSMAUG00000014322) #22	Nrxn2 (ENSMAUG00000016712) #23	Slc22a12 (ENSMAUG00000013474) #24	Rps6ka4 (ENSMAUG00000014157) #26	Ccdc88b (ENSMAUG00000014942) #27	Prdx5 (ENSMAUG00000014789) #28	Trmt112 (ENSMAUG00000013650) #29	Esrra (ENSMAUG00000015311) #30	Catsperz (ENSMAUG00000013579)	Kcnk4 (ENSMAUG00000013496) #32	Gpr137 (ENSMAUG00000013567) #33	Bad (ENSMAUG00000013587) #34	ENSMAUG00000013396 #37	Vegfb (ENSMAUG00000013835)	Trpt1 (ENSMAUG00000014107)	Fermt3 (ENSMAUG00000014915)
Chinese hamster chok1gshd	MODERN SPECIES	401	Naaladl1 (ENSCGRG00001023277) #8	Sac3d1 (ENSCGRG00001001044)	Snx15 (ENSCGRG00001006328) #9	Arl2 (ENSCGRG00001006206) #10	Batf2 (ENSCGRG00001017734) #11	Majin (ENSCGRG00001022292) #12	Ppp2r5b (ENSCGRG00001023829) #14	Gpha2 (ENSCGRG00001023673) #13	Atg2a (ENSCGRG00001004093) #15	Ehd1 (ENSCGRG00001019701) #16	Cdc42bpg (ENSCGRG00001011426) #17	Men1 (ENSCGRG00001016026) #18	Map4k2 (ENSCGRG00001001954) #19	Sf1 (ENSCGRG00001003677) #20	Pygm (ENSCGRG00001017923) #21	Rasgrp2 (ENSCGRG00001014872) #22	Nrxn2 (ENSCGRG00001023107) #23	Slc22a12 (ENSCGRG00001024306) #24	ENSCGRG00001003808	Rps6ka4 (ENSCGRG00001006171) #26	Ccdc88b (ENSCGRG00001013694) #27	Prdx5 (ENSCGRG00001021785) #28	Trmt112 (ENSCGRG00001018319) #29	Esrra (ENSCGRG00001022118) #30	Catsperz (ENSCGRG00001023239)	Kcnk4 (ENSCGRG00001022320) #32	Gpr137 (ENSCGRG00001001170) #33	ENSCGRG00001013654	Plcb3 (ENSCGRG00001015760) #35	ENSCGRG00001017620 #37	Ppp1r14b (ENSCGRG00001018612) #36
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.k #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Prairie vole	MODERN SPECIES	16	Naaladl1 (ENSMOCG00000008328) #8	Sac3d1 (ENSMOCG00000005046)	Snx15 (ENSMOCG00000013564) #9	Arl2 (ENSMOCG00000019685) #10	Batf2 (ENSMOCG00000018735) #11	Majin (ENSMOCG00000011923) #12	Gpha2 (ENSMOCG00000001732) #13	Ppp2r5b (ENSMOCG00000006307) #14	Atg2a (ENSMOCG00000015287) #15	Ehd1 (ENSMOCG00000015517) #16	ENSMOCG00000017355 #17	Men1 (ENSMOCG00000020547) #18	Map4k2 (ENSMOCG00000002655) #19	Sf1 (ENSMOCG00000022038) #20	Pygm (ENSMOCG00000014745) #21	Rasgrp2 (ENSMOCG00000003222) #22	Nrxn2 (ENSMOCG00000002279) #23	Slc22a12 (ENSMOCG00000018357) #24	Rps6ka4 (ENSMOCG00000017820) #26	Ccdc88b (ENSMOCG00000004168) #27	ENSMOCG00000022652 #28	ENSMOCG00000007447 #29	Esrra (ENSMOCG00000017945) #30	Catsperz (ENSMOCG00000013953)	Kcnk4 (ENSMOCG00000020536) #32	Gpr137 (ENSMOCG00000012626) #33	Bad (ENSMOCG00000007074) #34	Plcb3 (ENSMOCG00000003068) #35	Ppp1r14b (ENSMOCG00000017324) #36	ENSMOCG00000019729 #37	Vegfb (ENSMOCG00000021740)
Northern American deer mouse	MODERN SPECIES		Naaladl1 (ENSPEMG00000018122) #8	ENSPEMG00000009504	Snx15 (ENSPEMG00000018517) #9	Arl2 (ENSPEMG00000007265) #10	Batf2 (ENSPEMG00000027625) #11	Majin (ENSPEMG00000010851) #12	Gpha2 (ENSPEMG00000010635) #13	Ppp2r5b (ENSPEMG00000014652) #14	Atg2a (ENSPEMG00000013132) #15	Ehd1 (ENSPEMG00000010917) #16	Cdc42bpg (ENSPEMG00000016524) #17	Men1 (ENSPEMG00000014539) #18	Map4k2 (ENSPEMG00000018981) #19	Sf1 (ENSPEMG00000010463) #20	Pygm (ENSPEMG00000013433) #21	Rasgrp2 (ENSPEMG00000017801) #22	Nrxn2 (ENSPEMG00000018477) #23	ENSPEMG00000028736	Slc22a12 (ENSPEMG00000012720) #24	ENSPEMG00000030122 #25	Rps6ka4 (ENSPEMG00000014867) #26	Ccdc88b (ENSPEMG00000003930) #27	Prdx5 (ENSPEMG00000011606) #28	Trmt112 (ENSPEMG00000014684) #29	Esrra (ENSPEMG00000010701) #30	Catsperz (ENSPEMG00000014337)	Kcnk4 (ENSPEMG00000017633) #32	Gpr137 (ENSPEMG00000016592) #33	Bad (ENSPEMG00000015834) #34	Plcb3 (ENSPEMG00000015923) #35	Ppp1r14b (ENSPEMG00000015080) #36
Murinae	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Mus	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Mus_A	ANCESTRAL SPECIES	16	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00940000157074 #37	ENSGT00940000161844
Mouse	MODERN SPECIES	10	Naaladl1 (ENSMUSG00000054999) #8	Sac3d1 (ENSMUSG00000024790)	Snx15 (ENSMUSG00000024787) #9	Arl2 (ENSMUSG00000024944) #10	Batf2 (ENSMUSG00000039699) #11	Majin (ENSMUSG00000024786) #12	Gpha2 (ENSMUSG00000024784) #13	Ppp2r5b (ENSMUSG00000024777) #14	Atg2a (ENSMUSG00000024773) #15	Ehd1 (ENSMUSG00000024772) #16	Cdc42bpg (ENSMUSG00000024769) #17	Men1 (ENSMUSG00000024947) #18	Map4k2 (ENSMUSG00000024948) #19	Sf1 (ENSMUSG00000024949) #20	Pygm (ENSMUSG00000032648) #21	Rasgrp2 (ENSMUSG00000032946) #22	Nrxn2 (ENSMUSG00000033768) #23	Slc22a12 (ENSMUSG00000061742) #24	Rps6ka4 (ENSMUSG00000118668) #26	Ccdc88b (ENSMUSG00000047810) #27	Prdx5 (ENSMUSG00000024953) #28	Trmt112 (ENSMUSG00000038812) #29	Esrra (ENSMUSG00000024955) #30	Catsperz (ENSMUSG00000050623)	Kcnk4 (ENSMUSG00000024957) #32	Gpr137 (ENSMUSG00000024958) #33	Bad (ENSMUSG00000024959) #34	Plcb3 (ENSMUSG00000024960) #35	Ppp1r14b (ENSMUSG00000056612) #36	Fkbp2 (ENSMUSG00000056629)	Vegfb (ENSMUSG00000024962)
Mus_C	ANCESTRAL SPECIES	25	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00940000157074 #37	ENSGT00940000161844
spretus	MODERN SPECIES	10	Naaladl1 (MGP_SPRETEiJ_G0023505) #8	MGP_SPRETEiJ_G0023506	Snx15 (MGP_SPRETEiJ_G0023507) #9	Arl2 (MGP_SPRETEiJ_G0023508) #10	Batf2 (MGP_SPRETEiJ_G0023509) #11	Majin (MGP_SPRETEiJ_G0023510) #12	Gpha2 (MGP_SPRETEiJ_G0023511) #13	Ppp2r5b (MGP_SPRETEiJ_G0023512) #14	Atg2a (MGP_SPRETEiJ_G0023513) #15	Ehd1 (MGP_SPRETEiJ_G0023514) #16	Cdc42bpg (MGP_SPRETEiJ_G0023515) #17	Men1 (MGP_SPRETEiJ_G0023516) #18	Map4k2 (MGP_SPRETEiJ_G0023517) #19	Sf1 (MGP_SPRETEiJ_G0023518) #20	Pygm (MGP_SPRETEiJ_G0023519) #21	Rasgrp2 (MGP_SPRETEiJ_G0023520) #22	Nrxn2 (MGP_SPRETEiJ_G0023521) #23	Slc22a12 (MGP_SPRETEiJ_G0023522) #24	Rps6ka4 (MGP_SPRETEiJ_G0023523) #26	Ccdc88b (MGP_SPRETEiJ_G0023524) #27	Prdx5 (MGP_SPRETEiJ_G0023525) #28	Trmt112 (MGP_SPRETEiJ_G0023526) #29	Esrra (MGP_SPRETEiJ_G0023527) #30	Catsperz (MGP_SPRETEiJ_G0023528)	Kcnk4 (MGP_SPRETEiJ_G0023529) #32	Gpr137 (MGP_SPRETEiJ_G0023530) #33	Bad (MGP_SPRETEiJ_G0023531) #34	Plcb3 (MGP_SPRETEiJ_G0023532) #35	MGP_SPRETEiJ_G0023533 #37	Vegfb (MGP_SPRETEiJ_G0023534)	Dnajc4 (MGP_SPRETEiJ_G0023535)
Steppe mouse	MODERN SPECIES	3175	Sac3d1 (ENSMSIG00000030215)	Snx15 (ENSMSIG00000030203) #9	Arl2 (ENSMSIG00000030197) #10	ENSMSIG00000030190	Batf2 (ENSMSIG00000030186) #11	Majin (ENSMSIG00000030177) #12	Gpha2 (ENSMSIG00000030175) #13	Ppp2r5b (ENSMSIG00000030172) #14	Atg2a (ENSMSIG00000030160) #15	Ehd1 (ENSMSIG00000030150) #16	Cdc42bpg (ENSMSIG00000030126) #17	Men1 (ENSMSIG00000030097) #18	Map4k2 (ENSMSIG00000030079) #19	Sf1 (ENSMSIG00000030063) #20	Pygm (ENSMSIG00000030056) #21	Rasgrp2 (ENSMSIG00000030043) #22	ENSMSIG00000030041	Nrxn2 (ENSMSIG00000029962) #23	Slc22a12 (ENSMSIG00000029959) #24	Rps6ka4 (ENSMSIG00000029947) #26	Ccdc88b (ENSMSIG00000029920) #27	ENSMSIG00000029896 #28	ENSMSIG00000029890 #29	Esrra (ENSMSIG00000029887) #30	Catsperz (ENSMSIG00000029882)	Kcnk4 (ENSMSIG00000029881) #32	Gpr137 (ENSMSIG00000029868) #33	Bad (ENSMSIG00000029859) #34	Plcb3 (ENSMSIG00000029833) #35	ENSMSIG00000029822 #37
Ryukyu mouse	MODERN SPECIES	10	Naaladl1 (MGP_CAROLIEiJ_G0022594) #8	Sac3d1 (MGP_CAROLIEiJ_G0022595)	Snx15 (MGP_CAROLIEiJ_G0022596) #9	Arl2 (MGP_CAROLIEiJ_G0022597) #10	Batf2 (MGP_CAROLIEiJ_G0022598) #11	Majin (MGP_CAROLIEiJ_G0022599) #12	Gpha2 (MGP_CAROLIEiJ_G0022600) #13	Ppp2r5b (MGP_CAROLIEiJ_G0022601) #14	Atg2a (MGP_CAROLIEiJ_G0022602) #15	Ehd1 (MGP_CAROLIEiJ_G0022603) #16	Cdc42bpg (MGP_CAROLIEiJ_G0022604) #17	Men1 (MGP_CAROLIEiJ_G0022605) #18	Map4k2 (MGP_CAROLIEiJ_G0022606) #19	Sf1 (MGP_CAROLIEiJ_G0022607) #20	Pygm (MGP_CAROLIEiJ_G0022608) #21	Rasgrp2 (MGP_CAROLIEiJ_G0022609) #22	Nrxn2 (MGP_CAROLIEiJ_G0022610) #23	Slc22a12 (MGP_CAROLIEiJ_G0022611) #24	Rps6ka4 (MGP_CAROLIEiJ_G0022612) #26	Ccdc88b (MGP_CAROLIEiJ_G0022613) #27	MGP_CAROLIEiJ_G0022614 #28	Trmt112 (MGP_CAROLIEiJ_G0022615) #29	Esrra (MGP_CAROLIEiJ_G0022616) #30	Catsperz (MGP_CAROLIEiJ_G0022617)	Kcnk4 (MGP_CAROLIEiJ_G0022618) #32	Gpr137 (MGP_CAROLIEiJ_G0022619) #33	Bad (MGP_CAROLIEiJ_G0022620) #34	Plcb3 (MGP_CAROLIEiJ_G0022621) #35	MGP_CAROLIEiJ_G0022622 #36	MGP_CAROLIEiJ_G0022623 #37	Vegfb (MGP_CAROLIEiJ_G0022624)
Shrew mouse	MODERN SPECIES		Naaladl1 (MGP_PahariEiJ_G0014088) #8	Sac3d1 (MGP_PahariEiJ_G0014089)	Snx15 (MGP_PahariEiJ_G0014090) #9	Arl2 (MGP_PahariEiJ_G0014091) #10	Batf2 (MGP_PahariEiJ_G0014092) #11	Majin (MGP_PahariEiJ_G0014093) #12	Gpha2 (MGP_PahariEiJ_G0014094) #13	Ppp2r5b (MGP_PahariEiJ_G0014095) #14	Atg2a (MGP_PahariEiJ_G0014096) #15	Ehd1 (MGP_PahariEiJ_G0014097) #16	Cdc42bpg (MGP_PahariEiJ_G0014098) #17	Men1 (MGP_PahariEiJ_G0014099) #18	Map4k2 (MGP_PahariEiJ_G0014100) #19	Sf1 (MGP_PahariEiJ_G0014101) #20	Pygm (MGP_PahariEiJ_G0014102) #21	Rasgrp2 (MGP_PahariEiJ_G0014103) #22	Nrxn2 (MGP_PahariEiJ_G0014104) #23	Slc22a12 (MGP_PahariEiJ_G0014105) #24	Rps6ka4 (MGP_PahariEiJ_G0014106) #26	Ccdc88b (MGP_PahariEiJ_G0014107) #27	MGP_PahariEiJ_G0014108 #28	Trmt112 (MGP_PahariEiJ_G0014109) #29	Esrra (MGP_PahariEiJ_G0014110) #30	Catsperz (MGP_PahariEiJ_G0014111)	Kcnk4 (MGP_PahariEiJ_G0014112) #32	Gpr137 (MGP_PahariEiJ_G0014113) #33	Bad (MGP_PahariEiJ_G0014114) #34	Plcb3 (MGP_PahariEiJ_G0014115) #35	MGP_PahariEiJ_G0014116 #36	MGP_PahariEiJ_G0014117 #37	Vegfb (MGP_PahariEiJ_G0014118)
Rat	MODERN SPECIES		Naaladl1 (ENSRNOG00000021000) #8	Sac3d1 (ENSRNOG00000021003)	Snx15 (ENSRNOG00000021007) #9	Arl2 (ENSRNOG00000021010) #10	Batf2 (ENSRNOG00000021018) #11	Majin (ENSRNOG00000054336) #12	Gpha2 (ENSRNOG00000021020) #13	Ppp2r5b (ENSRNOG00000021025) #14	Atg2a (ENSRNOG00000060707) #15	Ehd1 (ENSRNOG00000043503) #16	Cdc42bpg (ENSRNOG00000027456) #17	Men1 (ENSRNOG00000021054) #18	Map4k2 (ENSRNOG00000021061) #19	Sf1 (ENSRNOG00000021085) #20	Pygm (ENSRNOG00000021090) #21	Rasgrp2 (ENSRNOG00000021098) #22	Nrxn2 (ENSRNOG00000021103) #23	Slc22a12 (ENSRNOG00000021108) #24	Rps6ka4 (ENSRNOG00000021117) #26	Ccdc88b (ENSRNOG00000024931) #27	AC098622.1 (ENSRNOG00000021123)	Prdx5 (ENSRNOG00000021125) #28	Esrra (ENSRNOG00000021139) #30	Kcnk4 (ENSRNOG00000021140) #32	Gpr137 (ENSRNOG00000021145) #33	Bad (ENSRNOG00000021147) #34	Plcb3 (ENSRNOG00000021150) #35	Ppp1r14b (ENSRNOG00000021151) #36	Fkbp2 (ENSRNOG00000021153) #37	Vegfb (ENSRNOG00000021156)	Dnajc4 (ENSRNOG00000043060)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1053	Naaladl1 (ENSNGAG00000016334) #8	Sac3d1 (ENSNGAG00000016283)	Snx15 (ENSNGAG00000017898) #9	Arl2 (ENSNGAG00000019483) #10	Batf2 (ENSNGAG00000006610) #11	Majin (ENSNGAG00000009571) #12	Gpha2 (ENSNGAG00000014128) #13	Ppp2r5b (ENSNGAG00000015836) #14	Atg2a (ENSNGAG00000019260) #15	Ehd1 (ENSNGAG00000020358) #16	Cdc42bpg (ENSNGAG00000023373) #17	Men1 (ENSNGAG00000021243) #18	Map4k2 (ENSNGAG00000006613) #19	Sf1 (ENSNGAG00000005550) #20	Pygm (ENSNGAG00000014922) #21	Rasgrp2 (ENSNGAG00000015520) #22	Nrxn2 (ENSNGAG00000015111) #23	Slc22a12 (ENSNGAG00000016504) #24	ENSNGAG00000016821	Rps6ka4 (ENSNGAG00000017235) #26	Ccdc88b (ENSNGAG00000019008) #27	Prdx5 (ENSNGAG00000013612) #28	Trmt112 (ENSNGAG00000019029) #29	Esrra (ENSNGAG00000019617) #30	Catsperz (ENSNGAG00000020348)	Kcnk4 (ENSNGAG00000001056) #32	Gpr137 (ENSNGAG00000013545) #33	Bad (ENSNGAG00000000616) #34	Plcb3 (ENSNGAG00000012120) #35	Ppp1r14b (ENSNGAG00000018980) #36	ENSNGAG00000015808 #37
Lesser Egyptian jerboa	MODERN SPECIES	60	Sac3d1 (ENSJJAG00000020813)	Snx15 (ENSJJAG00000014006) #9	Arl2 (ENSJJAG00000020533) #10	Batf2 (ENSJJAG00000014025) #11	Majin (ENSJJAG00000024211) #12	Gpha2 (ENSJJAG00000018211) #13	ENSJJAG00000013423 #14	Atg2a (ENSJJAG00000024432) #15	Ehd1 (ENSJJAG00000022299) #16	Cdc42bpg (ENSJJAG00000011078) #17	Men1 (ENSJJAG00000018841) #18	ENSJJAG00000011695 #19	ENSJJAG00000004864	Sf1 (ENSJJAG00000011788) #20	Pygm (ENSJJAG00000015336) #21	Rasgrp2 (ENSJJAG00000005025) #22	Nrxn2 (ENSJJAG00000018105) #23	Slc22a12 (ENSJJAG00000020785) #24	ENSJJAG00000014538	Rps6ka4 (ENSJJAG00000005520) #26	ENSJJAG00000010525 #27	ENSJJAG00000020068 #28	Trmt112 (ENSJJAG00000022077) #29	Esrra (ENSJJAG00000019013) #30	ENSJJAG00000023408	Kcnk4 (ENSJJAG00000007714) #32	Gpr137 (ENSJJAG00000018942) #33	Bad (ENSJJAG00000021934) #34	Plcb3 (ENSJJAG00000022408) #35	ENSJJAG00000023732 #37	Vegfb (ENSJJAG00000005482)
Kangaroo rat	MODERN SPECIES	373	Naaladl1 (ENSDORG00000004254) #8	Sac3d1 (ENSDORG00000004253)	Snx15 (ENSDORG00000004252) #9	Arl2 (ENSDORG00000004251) #10	Batf2 (ENSDORG00000004853) #11	Majin (ENSDORG00000011719) #12	Gpha2 (ENSDORG00000011717) #13	ENSDORG00000011713 #14	Atg2a (ENSDORG00000011703) #15	Ehd1 (ENSDORG00000030186) #16	Cdc42bpg (ENSDORG00000011693) #17	Men1 (ENSDORG00000011691) #18	ENSDORG00000011687 #19	Sf1 (ENSDORG00000016334) #20	Pygm (ENSDORG00000016333) #21	ENSDORG00000016465 #22	Nrxn2 (ENSDORG00000016463) #23	Slc22a12 (ENSDORG00000016462) #24	Rps6ka4 (ENSDORG00000007519) #26	Ccdc88b (ENSDORG00000007518) #27	Prdx5 (ENSDORG00000012325) #28	Trmt112 (ENSDORG00000012328) #29	Esrra (ENSDORG00000012329) #30	Kcnk4 (ENSDORG00000001639) #32	Gpr137 (ENSDORG00000001638) #33	Bad (ENSDORG00000001637) #34	Plcb3 (ENSDORG00000001633) #35	ENSDORG00000001631 #36	ENSDORG00000001630 #37	Vegfb (ENSDORG00000001629)	Dnajc4 (ENSDORG00000001628)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Sciuridae	ANCESTRAL SPECIES	22	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Marmotini	ANCESTRAL SPECIES	6	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Alpin marmot	MODERN SPECIES	3	NAALADL1 (ENSMMMG00000009557) #8	SAC3D1 (ENSMMMG00000009547)	SNX15 (ENSMMMG00000009519) #9	ARL2 (ENSMMMG00000009507) #10	BATF2 (ENSMMMG00000009502) #11	MAJIN (ENSMMMG00000009467) #12	GPHA2 (ENSMMMG00000009449) #13	PPP2R5B (ENSMMMG00000009421) #14	ATG2A (ENSMMMG00000009360) #15	EHD1 (ENSMMMG00000009347) #16	CDC42BPG (ENSMMMG00000009160) #17	MEN1 (ENSMMMG00000009029) #18	MAP4K2 (ENSMMMG00000008534) #19	SF1 (ENSMMMG00000008482) #20	PYGM (ENSMMMG00000008406) #21	RASGRP2 (ENSMMMG00000008264) #22	NRXN2 (ENSMMMG00000008232) #23	SLC22A12 (ENSMMMG00000008219) #24	SLC22A11 (ENSMMMG00000008186) #25	RPS6KA4 (ENSMMMG00000008133) #26	CCDC88B (ENSMMMG00000008011) #27	PRDX5 (ENSMMMG00000007963) #28	ENSMMMG00000007934 #29	ESRRA (ENSMMMG00000007925) #30	CATSPERZ (ENSMMMG00000007922)	KCNK4 (ENSMMMG00000007912) #32	GPR137 (ENSMMMG00000007790) #33	BAD (ENSMMMG00000007784) #34	PLCB3 (ENSMMMG00000007736) #35	PPP1R14B (ENSMMMG00000007711) #36	FKBP2 (ENSMMMG00000007672) #37
Marmotini_b	ANCESTRAL SPECIES	19	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Arctic ground squirrel	MODERN SPECIES	172	NAALADL1 (ENSUPAG00010010319) #8	SAC3D1 (ENSUPAG00010010344)	SNX15 (ENSUPAG00010010356) #9	ARL2 (ENSUPAG00010010395) #10	BATF2 (ENSUPAG00010010446) #11	MAJIN (ENSUPAG00010010423) #12	GPHA2 (ENSUPAG00010010454) #13	PPP2R5B (ENSUPAG00010010462) #14	ATG2A (ENSUPAG00010010478) #15	EHD1 (ENSUPAG00010010840) #16	CDC42BPG (ENSUPAG00010010851) #17	MEN1 (ENSUPAG00010010886) #18	MAP4K2 (ENSUPAG00010010961) #19	SF1 (ENSUPAG00010010986) #20	PYGM (ENSUPAG00010011050) #21	RASGRP2 (ENSUPAG00010011131) #22	NRXN2 (ENSUPAG00010011259) #23	SLC22A12 (ENSUPAG00010011570) #24	SLC22A11 (ENSUPAG00010011593) #25
Squirrel	MODERN SPECIES	199	NAALADL1 (ENSSTOG00000003242) #8	SAC3D1 (ENSSTOG00000025911)	SNX15 (ENSSTOG00000021395) #9	ARL2 (ENSSTOG00000025524) #10	BATF2 (ENSSTOG00000009892) #11	MAJIN (ENSSTOG00000009884) #12	GPHA2 (ENSSTOG00000028008) #13	PPP2R5B (ENSSTOG00000019488) #14	ATG2A (ENSSTOG00000009837) #15	EHD1 (ENSSTOG00000009829) #16	CDC42BPG (ENSSTOG00000009803) #17	MEN1 (ENSSTOG00000026456) #18	MAP4K2 (ENSSTOG00000010732) #19	SF1 (ENSSTOG00000009790) #20	PYGM (ENSSTOG00000004016) #21	ENSSTOG00000003988 #22	NRXN2 (ENSSTOG00000013346) #23	SLC22A12 (ENSSTOG00000027520) #24	RPS6KA4 (ENSSTOG00000026269) #26	CCDC88B (ENSSTOG00000020080) #27	PRDX5 (ENSSTOG00000002393) #28	ESRRA (ENSSTOG00000019877) #30	TRMT112 (ENSSTOG00000019857) #29	KCNK4 (ENSSTOG00000008461) #32	GPR137 (ENSSTOG00000024794) #33	BAD (ENSSTOG00000008441) #34	PLCB3 (ENSSTOG00000008397) #35	PPP1R14B (ENSSTOG00000021959) #36	FKBP2 (ENSSTOG00000028785) #37	VEGFB (ENSSTOG00000014290)	DNAJC4 (ENSSTOG00000026335)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005012382 #7	ENSSVLG00005012483 #8	SAC3D1 (ENSSVLG00005012520)	SNX15 (ENSSVLG00005012593) #9	ARL2 (ENSSVLG00005012664) #10	BATF2 (ENSSVLG00005012736) #11	ENSSVLG00005012834 #12	GPHA2 (ENSSVLG00005012916) #13	PPP2R5B (ENSSVLG00005012982) #14	ATG2A (ENSSVLG00005013202) #15	EHD1 (ENSSVLG00005013413) #16	CDC42BPG (ENSSVLG00005013552) #17	MEN1 (ENSSVLG00005013750) #18	SF1 (ENSSVLG00005014124) #20	PYGM (ENSSVLG00005014479) #21	RASGRP2 (ENSSVLG00005014880) #22	NRXN2 (ENSSVLG00005015168) #23	SLC22A12 (ENSSVLG00005015836) #24	SLC22A11 (ENSSVLG00005016180) #25	RPS6KA4 (ENSSVLG00005016438) #26	CCDC88B (ENSSVLG00005016552) #27	PRDX5 (ENSSVLG00005017011) #28	ENSSVLG00005017157 #29	ESRRA (ENSSVLG00005017266) #30	KCNK4 (ENSSVLG00005017540) #32	GPR137 (ENSSVLG00005017667) #33	BAD (ENSSVLG00005018004) #34	PLCB3 (ENSSVLG00005018092) #35	PPP1R14B (ENSSVLG00005018431) #36	FKBP2 (ENSSVLG00005018547) #37	DNAJC4 (ENSSVLG00005018674)
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Naked mole-rat female	MODERN SPECIES	14	NAALADL1 (ENSHGLG00000012818) #8	SAC3D1 (ENSHGLG00000010681)	SNX15 (ENSHGLG00000012842) #9	ENSHGLG00000010538 #10	BATF2 (ENSHGLG00000011217) #11	MAJIN (ENSHGLG00000012767) #12	GPHA2 (ENSHGLG00000011089) #13	PPP2R5B (ENSHGLG00000011889) #14	ATG2A (ENSHGLG00000012242) #15	EHD1 (ENSHGLG00000010254) #16	CDC42BPG (ENSHGLG00000013232) #17	MEN1 (ENSHGLG00000011304) #18	MAP4K2 (ENSHGLG00000016920) #19	SF1 (ENSHGLG00000009541) #20	PYGM (ENSHGLG00000012545) #21	RASGRP2 (ENSHGLG00000016943) #22	NRXN2 (ENSHGLG00000019037) #23	SLC22A11 (ENSHGLG00000019479) #25	RPS6KA4 (ENSHGLG00000011748) #26	CCDC88B (ENSHGLG00000012864) #27	PRDX5 (ENSHGLG00000010351) #28	TRMT112 (ENSHGLG00000011130) #29	ESRRA (ENSHGLG00000011668) #30	ENSHGLG00000044117	KCNK4 (ENSHGLG00000012923) #32	GPR137 (ENSHGLG00000010359) #33	BAD (ENSHGLG00000013154) #34	PPP1R14B (ENSHGLG00000041422) #36	FKBP2 (ENSHGLG00000037212) #37	ENSHGLG00000013921	DNAJC4 (ENSHGLG00000010363)
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37	ENSGT00940000161844	ENSGT00510000048574
Guinea pig	MODERN SPECIES	42	NAALADL1 (ENSCPOG00000006928) #8	SAC3D1 (ENSCPOG00000027025)	SNX15 (ENSCPOG00000006920) #9	ARL2 (ENSCPOG00000025520) #10	BATF2 (ENSCPOG00000035250) #11	MAJIN (ENSCPOG00000010188) #12	GPHA2 (ENSCPOG00000019413) #13	PPP2R5B (ENSCPOG00000022763) #14	ATG2A (ENSCPOG00000008573) #15	EHD1 (ENSCPOG00000008157) #16	CDC42BPG (ENSCPOG00000008144) #17	MEN1 (ENSCPOG00000001464) #18	MAP4K2 (ENSCPOG00000001461) #19	SF1 (ENSCPOG00000012290) #20	PYGM (ENSCPOG00000008604) #21	RASGRP2 (ENSCPOG00000024752) #22	NRXN2 (ENSCPOG00000000775) #23	SLC22A12 (ENSCPOG00000020117) #24	RPS6KA4 (ENSCPOG00000000740) #26	CCDC88B (ENSCPOG00000026141) #27	PRDX5 (ENSCPOG00000021239) #28	TRMT112 (ENSCPOG00000030092) #29	ESRRA (ENSCPOG00000015411) #30	KCNK4 (ENSCPOG00000025100) #32	GPR137 (ENSCPOG00000015677) #33	ENSCPOG00000005670	PLCB3 (ENSCPOG00000021694) #35	PPP1R14B (ENSCPOG00000002930) #36	FKBP2 (ENSCPOG00000002928) #37	VEGFB (ENSCPOG00000032042)	DNAJC4 (ENSCPOG00000040213)
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000171321	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37	ENSGT00940000161844	ENSGT00510000048574
Degu	MODERN SPECIES	225	ENSODEG00000014281 #9	ENSODEG00000014792 #10	BATF2 (ENSODEG00000014544) #11	ENSODEG00000015626 #12	ENSODEG00000014563	GPHA2 (ENSODEG00000014822) #13	PPP2R5B (ENSODEG00000015202) #14	ATG2A (ENSODEG00000015008) #15	EHD1 (ENSODEG00000014527) #16	CDC42BPG (ENSODEG00000016413) #17	MEN1 (ENSODEG00000016424) #18	ENSODEG00000014773 #19	ENSODEG00000014732	ENSODEG00000015941	PYGM (ENSODEG00000015005) #21	RASGRP2 (ENSODEG00000015299) #22	NRXN2 (ENSODEG00000015601) #23	SLC22A12 (ENSODEG00000015606) #24	ENSODEG00000014954	RPS6KA4 (ENSODEG00000015939) #26	CCDC88B (ENSODEG00000015064) #27	PRDX5 (ENSODEG00000014933) #28	ENSODEG00000016089 #29	ESRRA (ENSODEG00000015769) #30	KCNK4 (ENSODEG00000015103) #32	GPR137 (ENSODEG00000016470) #33	BAD (ENSODEG00000016677) #34	PLCB3 (ENSODEG00000015366) #35	PPP1R14B (ENSODEG00000015767) #36	FKBP2 (ENSODEG00000015505) #37	VEGFB (ENSODEG00000016602)
Long-tailed chinchilla	MODERN SPECIES	129	NAALADL1 (ENSCLAG00000016853) #8	SAC3D1 (ENSCLAG00000016933)	SNX15 (ENSCLAG00000016773) #9	ARL2 (ENSCLAG00000017139) #10	BATF2 (ENSCLAG00000016605) #11	ENSCLAG00000016695 #12	GPHA2 (ENSCLAG00000016728) #13	PPP2R5B (ENSCLAG00000017161) #14	ATG2A (ENSCLAG00000016910) #15	EHD1 (ENSCLAG00000016412) #16	CDC42BPG (ENSCLAG00000016727) #17	MEN1 (ENSCLAG00000014829) #18	MAP4K2 (ENSCLAG00000015778) #19	NRXN2 (ENSCLAG00000017148) #23	PYGM (ENSCLAG00000015704) #21	RASGRP2 (ENSCLAG00000016758) #22	SLC22A12 (ENSCLAG00000015575) #24	RPS6KA4 (ENSCLAG00000017283) #26	CCDC88B (ENSCLAG00000016866) #27	PRDX5 (ENSCLAG00000017097) #28	TRMT112 (ENSCLAG00000016885) #29	ESRRA (ENSCLAG00000016837) #30	KCNK4 (ENSCLAG00000016662) #32	GPR137 (ENSCLAG00000016909) #33	BAD (ENSCLAG00000017103) #34	PLCB3 (ENSCLAG00000016775) #35	PPP1R14B (ENSCLAG00000016868) #36	FKBP2 (ENSCLAG00000017246) #37	VEGFB (ENSCLAG00000016750)	DNAJC4 (ENSCLAG00000016759)	NUDT22 (ENSCLAG00000016346)
Lagomorpha	ANCESTRAL SPECIES	421														ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22
Pika	MODERN SPECIES	2634																ENSOPRG00000017109 #22
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	992													ENSOCUG00000021669 #17	SF1 (ENSOCUG00000026486) #20	PYGM (ENSOCUG00000002173) #21	ENSOCUG00000034250 #22	ENSOCUG00000000974 #22
Rabbit	MODERN SPECIES	992												ENSOCUG00000021669 #17	SF1 (ENSOCUG00000026486) #20	PYGM (ENSOCUG00000002173) #21	ENSOCUG00000034250 #22	ENSOCUG00000000974 #22
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000160483 #22
Hedgehog	MODERN SPECIES	5945																RASGRP2 (ENSEEUG00000008647) #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35
Carnivora	ANCESTRAL SPECIES	7	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.b #28	ENSGT00390000018173.a.a #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Caniformia	ANCESTRAL SPECIES	21	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.a #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.a #28	ENSGT00390000009268.z #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00940000162213.a.b.a	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b.k #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.a #28	ENSGT00390000009268.z #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Ursus	ANCESTRAL SPECIES	21	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00940000162213.a.b.a	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b.k #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00950000183087.A.b.b	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.a #28	ENSGT00390000009268.z #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
American black bear	MODERN SPECIES	547	SNX15 (ENSUAMG00000012247) #9	ARL2 (ENSUAMG00000012246) #10	BATF2 (ENSUAMG00000012245) #11	ENSUAMG00000012241	ENSUAMG00000012239	GPHA2 (ENSUAMG00000012235) #13	PPP2R5B (ENSUAMG00000012233) #14	ATG2A (ENSUAMG00000012087) #15	EHD1 (ENSUAMG00000012071) #16	CDC42BPG (ENSUAMG00000012063) #17	MEN1 (ENSUAMG00000012050) #18	MAP4K2 (ENSUAMG00000012000) #19	ENSUAMG00000011982	SF1 (ENSUAMG00000011977) #20	PYGM (ENSUAMG00000010714) #21	RASGRP2 (ENSUAMG00000010677) #22
Polar bear	MODERN SPECIES	328	SNX15 (ENSUMAG00000008002) #9	ARL2 (ENSUMAG00000007990) #10	BATF2 (ENSUMAG00000007986) #11	ENSUMAG00000007983	ENSUMAG00000007979 #12	GPHA2 (ENSUMAG00000007978) #13	PPP2R5B (ENSUMAG00000007965) #14	ENSUMAG00000007963 #15	EHD1 (ENSUMAG00000007890) #16	ENSUMAG00000007867 #17	ENSUMAG00000007845 #17	MEN1 (ENSUMAG00000007830) #18	MAP4K2 (ENSUMAG00000007389) #19	SF1 (ENSUMAG00000007268) #20	PYGM (ENSUMAG00000003721) #21	RASGRP2 (ENSUMAG00000003204) #22	NRXN2 (ENSUMAG00000003182) #23	ENSUMAG00000003176 #24	SLC22A11 (ENSUMAG00000002967) #25	ENSUMAG00000002914	RPS6KA4 (ENSUMAG00000002800) #26	ENSUMAG00000002786	ENSUMAG00000002780 #28	ENSUMAG00000002772 #29	ESRRA (ENSUMAG00000002751) #30	KCNK4 (ENSUMAG00000002740) #32	GPR137 (ENSUMAG00000002736) #33	BAD (ENSUMAG00000002733) #34	PLCB3 (ENSUMAG00000001701) #35	PPP1R14B (ENSUMAG00000001474) #36	ENSUMAG00000001463 #37
Giant Panda	MODERN SPECIES	7	ENSAMEG00000029493	ENSAMEG00000025722	SNX15 (ENSAMEG00000017727) #9	ARL2 (ENSAMEG00000017738) #10	BATF2 (ENSAMEG00000027463) #11	ENSAMEG00000030063	MAJIN (ENSAMEG00000017748) #12	GPHA2 (ENSAMEG00000017751) #13	PPP2R5B (ENSAMEG00000017752) #14	ATG2A (ENSAMEG00000017758) #15	EHD1 (ENSAMEG00000017785) #16	CDC42BPG (ENSAMEG00000017792) #17	ENSAMEG00000017815 #19	SF1 (ENSAMEG00000017828) #20	PYGM (ENSAMEG00000017831) #21	RASGRP2 (ENSAMEG00000017841) #22	NRXN2 (ENSAMEG00000017852) #23	SLC22A12 (ENSAMEG00000017883) #24	SLC22A11 (ENSAMEG00000017927) #25	RPS6KA4 (ENSAMEG00000017931) #26	CCDC88B (ENSAMEG00000017942) #27	PRDX5 (ENSAMEG00000017959) #28	ENSAMEG00000017965 #29	ESRRA (ENSAMEG00000017967) #30	CATSPERZ (ENSAMEG00000017976)	KCNK4 (ENSAMEG00000017983) #32	GPR137 (ENSAMEG00000017986) #33	BAD (ENSAMEG00000017990) #34	PLCB3 (ENSAMEG00000017993) #35	PPP1R14B (ENSAMEG00000018019) #36	ENSAMEG00000018025 #37
Mustelinae	ANCESTRAL SPECIES	3	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.a #28	ENSGT00390000009268.z #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Ferret	MODERN SPECIES	314	NAALADL1 (ENSMPUG00000012362) #8	SAC3D1 (ENSMPUG00000012461)	SNX15 (ENSMPUG00000012465) #9	ARL2 (ENSMPUG00000012469) #10	BATF2 (ENSMPUG00000012474) #11	MAJIN (ENSMPUG00000012476) #12	GPHA2 (ENSMPUG00000012478) #13	PPP2R5B (ENSMPUG00000012484) #14	ATG2A (ENSMPUG00000012490) #15	EHD1 (ENSMPUG00000012497) #16	CDC42BPG (ENSMPUG00000012501) #17	MEN1 (ENSMPUG00000012509) #18	MAP4K2 (ENSMPUG00000012513) #19	SF1 (ENSMPUG00000012684) #20	PYGM (ENSMPUG00000012740) #21	RASGRP2 (ENSMPUG00000012752) #22	NRXN2 (ENSMPUG00000012828) #23	SLC22A12 (ENSMPUG00000012842) #24	SLC22A11 (ENSMPUG00000012895) #25	RPS6KA4 (ENSMPUG00000012899) #26	PRDX5 (ENSMPUG00000012907) #28	TRMT112 (ENSMPUG00000012911) #29	ESRRA (ENSMPUG00000012927) #30	KCNK4 (ENSMPUG00000012929) #32	GPR137 (ENSMPUG00000012949) #33	BAD (ENSMPUG00000012954) #34	PLCB3 (ENSMPUG00000012959) #35	PPP1R14B (ENSMPUG00000013208) #36	FKBP2 (ENSMPUG00000013228) #37	VEGFB (ENSMPUG00000013232)	DNAJC4 (ENSMPUG00000013266)
American mink	MODERN SPECIES	104	ENSNVIG00000017846 #8	SAC3D1 (ENSNVIG00000017858)	SNX15 (ENSNVIG00000017889) #9	ARL2 (ENSNVIG00000017922) #10	BATF2 (ENSNVIG00000017946) #11	ENSNVIG00000017955 #12	GPHA2 (ENSNVIG00000017978) #13	PPP2R5B (ENSNVIG00000018005) #14	ATG2A (ENSNVIG00000018047) #15	EHD1 (ENSNVIG00000018115) #16	CDC42BPG (ENSNVIG00000018118) #17	MEN1 (ENSNVIG00000018173) #18	MAP4K2 (ENSNVIG00000018272) #19	SF1 (ENSNVIG00000018336) #20	PYGM (ENSNVIG00000018416) #21	RASGRP2 (ENSNVIG00000018478) #22	NRXN2 (ENSNVIG00000018569) #23	SLC22A12 (ENSNVIG00000019160) #24	SLC22A11 (ENSNVIG00000019252) #25	RPS6KA4 (ENSNVIG00000019337) #26	CCDC88B (ENSNVIG00000019387) #27	PRDX5 (ENSNVIG00000019436) #28	ENSNVIG00000019443 #29	ESRRA (ENSNVIG00000019472) #30	CATSPERZ (ENSNVIG00000019480)	KCNK4 (ENSNVIG00000019499) #32	GPR137 (ENSNVIG00000019545) #33	BAD (ENSNVIG00000019573) #34	PLCB3 (ENSNVIG00000019582) #35	PPP1R14B (ENSNVIG00000019636) #36	FKBP2 (ENSNVIG00000019655) #37
Canidae	ANCESTRAL SPECIES	13	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941.h #10	ENSGT00940000162373 #11	ENSGT00940000169043	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT00940000155978.b #23	ENSGT00940000163749	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.a.a #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853.b	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00390000010028 #7	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941.h #10	ENSGT00940000162373 #11	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT00940000155978.b #23	ENSGT00940000163749	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.a.a #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853.b	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35
Dingo	MODERN SPECIES	36	SAC3D1 (ENSCAFG00020014900)	SNX15 (ENSCAFG00020014896) #9	ARL2 (ENSCAFG00020014890) #10	BATF2 (ENSCAFG00020014888) #11	ENSCAFG00020014883	ENSCAFG00020014877	GPHA2 (ENSCAFG00020014873) #13	PPP2R5B (ENSCAFG00020014870) #14	ENSCAFG00020014868 #15	EHD1 (ENSCAFG00020014846) #16	CDC42BPG (ENSCAFG00020014428) #17	MEN1 (ENSCAFG00020014394) #18	MAP4K2 (ENSCAFG00020014386) #19	SF1 (ENSCAFG00020014381) #20	PYGM (ENSCAFG00020014378) #21	RASGRP2 (ENSCAFG00020014369) #22	ENSCAFG00020014368 ##23	NRXN2 (ENSCAFG00020014363) #23	ENSCAFG00020014355	SLC22A12 (ENSCAFG00020014353) #24	SLC22A11 (ENSCAFG00020014250) #25	RPS6KA4 (ENSCAFG00020014242) #26	CCDC88B (ENSCAFG00020014176) #27	ENSCAFG00020014168 #28	TRMT112 (ENSCAFG00020014158) #29	ESRRA (ENSCAFG00020014154) #30	ENSCAFG00020014151	GPR137 (ENSCAFG00020014142) #33	BAD (ENSCAFG00020014140) #34	PLCB3 (ENSCAFG00020014131) #35	ENSCAFG00020014127 #36
Dog	MODERN SPECIES	9	ENSCAFG00845027036 #7	NAALADL1 (ENSCAFG00845027168) #8	SAC3D1 (ENSCAFG00845027424)	SNX15 (ENSCAFG00845027486) #9	ARL2 (ENSCAFG00845027632) #10	BATF2 (ENSCAFG00845027773) #11	ENSCAFG00845027869 #13	PPP2R5B (ENSCAFG00845028005) #14	ATG2A (ENSCAFG00845028223) #15	EHD1 (ENSCAFG00845028367) #16	CDC42BPG (ENSCAFG00845028521) #17	MEN1 (ENSCAFG00845028814) #18	MAP4K2 (ENSCAFG00845028973) #19	SF1 (ENSCAFG00845029060) #20	PYGM (ENSCAFG00845029235) #21	RASGRP2 (ENSCAFG00845029413) #22	NRXN2 (ENSCAFG00845029769) #23	SLC22A12 (ENSCAFG00845030289) #24	SLC22A11 (ENSCAFG00845030346) #25	RPS6KA4 (ENSCAFG00845030464) #27	ENSCAFG00845030543 #28	TRMT112 (ENSCAFG00845030562) #29	ESRRA (ENSCAFG00845030574) #30	ENSCAFG00845030588	KCNK4 (ENSCAFG00845030598) #32	GPR137 (ENSCAFG00845030606) #33	BAD (ENSCAFG00845030649) #34	PLCB3 (ENSCAFG00845030670) #35	ENSCAFG00845030695 #36	FKBP2 (ENSCAFG00845030714) #37	ENSCAFG00845030726
Red fox	MODERN SPECIES	49	SAC3D1 (ENSVVUG00000027521)	SNX15 (ENSVVUG00000027523) #9	ARL2 (ENSVVUG00000027528) #10	BATF2 (ENSVVUG00000027531) #11	ENSVVUG00000027532	ENSVVUG00000027533	GPHA2 (ENSVVUG00000027535) #13	PPP2R5B (ENSVVUG00000027537) #14	ATG2A (ENSVVUG00000027540) #15	EHD1 (ENSVVUG00000027552) #16	CDC42BPG (ENSVVUG00000027560) #17	MEN1 (ENSVVUG00000027580) #18	MAP4K2 (ENSVVUG00000027685) #19	SF1 (ENSVVUG00000028585) #20	PYGM (ENSVVUG00000028746) #21	RASGRP2 (ENSVVUG00000029746) #22	NRXN2 (ENSVVUG00000029749) #23	SLC22A12 (ENSVVUG00000029752) #24	SLC22A11 (ENSVVUG00000029753) #25	RPS6KA4 (ENSVVUG00000029755) #26	ENSVVUG00000029757 #27	ENSVVUG00000029759 #28	TRMT112 (ENSVVUG00000029760) #29	ESRRA (ENSVVUG00000029761) #30	ENSVVUG00000029763	KCNK4 (ENSVVUG00000029765) #32	GPR137 (ENSVVUG00000029766) #33	BAD (ENSVVUG00000029767) #34	PLCB3 (ENSVVUG00000029768) #35	PPP1R14B (ENSVVUG00000029769) #36	FKBP2 (ENSVVUG00000029770) #37
Felidae	ANCESTRAL SPECIES		ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.b #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.g.a #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Panthera	ANCESTRAL SPECIES	18	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.b #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.g.a #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Tiger	MODERN SPECIES	369	CDCA5 (ENSPTIG00000008589) #7	ENSPTIG00000011205 #8	ENSPTIG00000014098	SNX15 (ENSPTIG00000014462) #9	ARL2 (ENSPTIG00000015160) #10	BATF2 (ENSPTIG00000015556) #11	ENSPTIG00000015678	GPHA2 (ENSPTIG00000016079) #13	PPP2R5B (ENSPTIG00000016316) #14	ENSPTIG00000017473 #15	EHD1 (ENSPTIG00000020341) #16	CDC42BPG (ENSPTIG00000021193) #17	MEN1 (ENSPTIG00000005535) #18	SF1 (ENSPTIG00000016141) #20	PYGM (ENSPTIG00000017673) #21	RASGRP2 (ENSPTIG00000020395) #22	ENSPTIG00000002575 #23	ENSPTIG00000004192	ENSPTIG00000006143 #24	SLC22A11 (ENSPTIG00000008346) #25	ENSPTIG00000012175 #26	ENSPTIG00000014800 #27	ENSPTIG00000015549 #28	TRMT112 (ENSPTIG00000016927) #29	ESRRA (ENSPTIG00000017725) #30	CATSPERZ (ENSPTIG00000019815)	ENSPTIG00000000731 #33	BAD (ENSPTIG00000005517) #34	PLCB3 (ENSPTIG00000006263) #35	ENSPTIG00000012773 #36	FKBP2 (ENSPTIG00000013635) #37
Panthera_a	ANCESTRAL SPECIES	18	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173.a.b #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.g.a #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
leopard	MODERN SPECIES	64	NAALADL1 (ENSPPRG00000000450) #8	SAC3D1 (ENSPPRG00000002094)	SNX15 (ENSPPRG00000002257) #9	ARL2 (ENSPPRG00000003016) #10	BATF2 (ENSPPRG00000003429) #11	ENSPPRG00000003807 #12	GPHA2 (ENSPPRG00000003914) #13	PPP2R5B (ENSPPRG00000003965) #14	ATG2A (ENSPPRG00000005397) #15	EHD1 (ENSPPRG00000006031) #16	CDC42BPG (ENSPPRG00000006731) #17	MEN1 (ENSPPRG00000007848) #18	MAP4K2 (ENSPPRG00000010561) #19	SF1 (ENSPPRG00000013566) #20	PYGM (ENSPPRG00000015100) #21	RASGRP2 (ENSPPRG00000024370) #22	NRXN2 (ENSPPRG00000023605) #23	SLC22A12 (ENSPPRG00000000103) #24	SLC22A11 (ENSPPRG00000000900) #25	RPS6KA4 (ENSPPRG00000002248) #26	CCDC88B (ENSPPRG00000003383) #27	ENSPPRG00000003575 #28	TRMT112 (ENSPPRG00000003855) #29	ESRRA (ENSPPRG00000004128) #30	CATSPERZ (ENSPPRG00000004247)	KCNK4 (ENSPPRG00000006456) #32	ENSPPRG00000007533 #33	BAD (ENSPPRG00000007989) #34	PLCB3 (ENSPPRG00000011007) #35	PPP1R14B (ENSPPRG00000011369) #36	ENSPPRG00000012134 #37
lion	MODERN SPECIES	10	NAALADL1 (ENSPLOG00000018108) #8	SAC3D1 (ENSPLOG00000017959)	SNX15 (ENSPLOG00000017892) #9	ARL2 (ENSPLOG00000017811) #10	BATF2 (ENSPLOG00000017755) #11	ENSPLOG00000017686 #12	GPHA2 (ENSPLOG00000017651) #13	PPP2R5B (ENSPLOG00000017529) #14	ATG2A (ENSPLOG00000017424) #15	EHD1 (ENSPLOG00000017303) #16	CDC42BPG (ENSPLOG00000017001) #17	MEN1 (ENSPLOG00000016663) #18	MAP4K2 (ENSPLOG00000016173) #19	SF1 (ENSPLOG00000015699) #20	PYGM (ENSPLOG00000015274) #21	RASGRP2 (ENSPLOG00000014797) #22	NRXN2 (ENSPLOG00000014192) #23	SLC22A12 (ENSPLOG00000013797) #24	SLC22A11 (ENSPLOG00000013467) #25	RPS6KA4 (ENSPLOG00000013383) #26	CCDC88B (ENSPLOG00000013260) #27	PRDX5 (ENSPLOG00000013202) #28	TRMT112 (ENSPLOG00000013100) #29	ESRRA (ENSPLOG00000013049) #30	CATSPERZ (ENSPLOG00000012935)	KCNK4 (ENSPLOG00000012854) #32	GPR137 (ENSPLOG00000012663) #33	BAD (ENSPLOG00000012590) #34	PLCB3 (ENSPLOG00000012272) #35	PPP1R14B (ENSPLOG00000012105) #36	FKBP2 (ENSPLOG00000012018) #37
Cat	MODERN SPECIES	241	ENSFCAG00000049970 #8	SAC3D1 (ENSFCAG00000023322)	SNX15 (ENSFCAG00000006249) #9	ARL2 (ENSFCAG00000038054) #10	BATF2 (ENSFCAG00000006248) #11	MAJIN (ENSFCAG00000012243) #12	GPHA2 (ENSFCAG00000012242) #13	PPP2R5B (ENSFCAG00000012241) #14	ATG2A (ENSFCAG00000012240) #15	EHD1 (ENSFCAG00000027734) #16	CDC42BPG (ENSFCAG00000012238) #17	MEN1 (ENSFCAG00000012236) #18	MAP4K2 (ENSFCAG00000012234) #19	SF1 (ENSFCAG00000012231) #20	PYGM (ENSFCAG00000012225) #21	RASGRP2 (ENSFCAG00000046237) #22	NRXN2 (ENSFCAG00000033859) #23	SLC22A12 (ENSFCAG00000001997) #24	SLC22A11 (ENSFCAG00000001994) #25	RPS6KA4 (ENSFCAG00000000512) #26	CCDC88B (ENSFCAG00000000511) #27	ENSFCAG00000028856 #28	TRMT112 (ENSFCAG00000023392) #29	ESRRA (ENSFCAG00000027402) #30	CATSPERZ (ENSFCAG00000028881)	KCNK4 (ENSFCAG00000002537) #32	BAD (ENSFCAG00000044963) #34	PLCB3 (ENSFCAG00000000507) #35	PPP1R14B (ENSFCAG00000030667) #36	FKBP2 (ENSFCAG00000029410) #37	VEGFB (ENSFCAG00000005946)
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Chiroptera	ANCESTRAL SPECIES	14	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Megabat	MODERN SPECIES	2176														SF1 (ENSPVAG00000016938) #20	PYGM (ENSPVAG00000016936) #21	RASGRP2 (ENSPVAG00000016934) #22
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Microbat	MODERN SPECIES	1495	ENSMLUG00000025584	SAC3D1 (ENSMLUG00000009635)	SNX15 (ENSMLUG00000009653) #9	ENSMLUG00000024082 #10	BATF2 (ENSMLUG00000015322) #11	MAJIN (ENSMLUG00000015317) #12	GPHA2 (ENSMLUG00000014392) #13	PPP2R5B (ENSMLUG00000015308) #14	ATG2A (ENSMLUG00000015280) #15	EHD1 (ENSMLUG00000015276) #16	CDC42BPG (ENSMLUG00000015259) #17	MEN1 (ENSMLUG00000015249) #18	MAP4K2 (ENSMLUG00000015233) #19	SF1 (ENSMLUG00000015217) #20	PYGM (ENSMLUG00000015203) #21	RASGRP2 (ENSMLUG00000015190) #22
Greater horseshoe bat	MODERN SPECIES	2	NAALADL1 (ENSRFEG00010004845) #8	SAC3D1 (ENSRFEG00010004873)	SNX15 (ENSRFEG00010004885) #9	ARL2 (ENSRFEG00010004904) #10	BATF2 (ENSRFEG00010004924) #11	ENSRFEG00010004929	ENSRFEG00010004940 #12	GPHA2 (ENSRFEG00010004946) #13	ATG2A (ENSRFEG00010005096) #15	EHD1 (ENSRFEG00010005123) #16	CDC42BPG (ENSRFEG00010005238) #17	MEN1 (ENSRFEG00010005500) #18	MAP4K2 (ENSRFEG00010005551) #19	SF1 (ENSRFEG00010005805) #20	PYGM (ENSRFEG00010006126) #21	RASGRP2 (ENSRFEG00010006260) #22	NRXN2 (ENSRFEG00010006436) #23	SLC22A12 (ENSRFEG00010006774) #24	SLC22A11 (ENSRFEG00010006994) #25	RPS6KA4 (ENSRFEG00010007231) #26	CCDC88B (ENSRFEG00010007302) #27	PRDX5 (ENSRFEG00010007491) #28	ENSRFEG00010007518 #29	ESRRA (ENSRFEG00010007600) #30	CATSPERZ (ENSRFEG00010007622)	KCNK4 (ENSRFEG00010007639) #32	GPR137 (ENSRFEG00010007673) #33	BAD (ENSRFEG00010007742) #34	PLCB3 (ENSRFEG00010007782) #35	PPP1R14B (ENSRFEG00010008083) #36	FKBP2 (ENSRFEG00010008165) #37
Equus	ANCESTRAL SPECIES	11	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Horse	MODERN SPECIES	3	CDCA5 (ENSECAG00000019578) #7	NAALADL1 (ENSECAG00000018798) #8	SAC3D1 (ENSECAG00000016053)	SNX15 (ENSECAG00000018173) #9	ARL2 (ENSECAG00000048725) #10	BATF2 (ENSECAG00000035459) #11	GPHA2 (ENSECAG00000006858) #13	PPP2R5B (ENSECAG00000016071) #14	ATG2A (ENSECAG00000013442) #15	EHD1 (ENSECAG00000011638) #16	CDC42BPG (ENSECAG00000009712) #17	MEN1 (ENSECAG00000008076) #18	MAP4K2 (ENSECAG00000007374) #19	SF1 (ENSECAG00000024544) #20	PYGM (ENSECAG00000024000) #21	RASGRP2 (ENSECAG00000022956) #22	ENSECAG00000032259	NRXN2 (ENSECAG00000021096) #23	SLC22A12 (ENSECAG00000019827) #24	SLC22A11 (ENSECAG00000032146) #25	CCDC88B (ENSECAG00000017900) #27	PRDX5 (ENSECAG00000017747) #28	ESRRA (ENSECAG00000015602) #30	CATSPERZ (ENSECAG00000036140)	KCNK4 (ENSECAG00000015246) #32	GPR137 (ENSECAG00000014977) #33	BAD (ENSECAG00000014950)	PLCB3 (ENSECAG00000011700) #35	PPP1R14B (ENSECAG00000010628) #36	FKBP2 (ENSECAG00000010601) #37	ENSECAG00000010539
Donkey	MODERN SPECIES	21	NAALADL1 (ENSEASG00005018224) #8	SAC3D1 (ENSEASG00005035286)	SNX15 (ENSEASG00005018228) #9	ENSEASG00005037311 #9	ARL2 (ENSEASG00005018231) #10	BATF2 (ENSEASG00005027597) #11	ENSEASG00005030705 #12	PPP2R5B (ENSEASG00005018236) #14	ATG2A (ENSEASG00005018238) #15	EHD1 (ENSEASG00005018250) #16	CDC42BPG (ENSEASG00005018252) #17	MEN1 (ENSEASG00005018258) #18	MAP4K2 (ENSEASG00005018263) #19	SF1 (ENSEASG00005018272) #20	PYGM (ENSEASG00005018532) #21	RASGRP2 (ENSEASG00005019867) #22	NRXN2 (ENSEASG00005019870) #23	ENSEASG00005030822	SLC22A12 (ENSEASG00005030007) #24	ENSEASG00005032567 #25	ENSEASG00005019873	RPS6KA4 (ENSEASG00005036845) #26	CCDC88B (ENSEASG00005019903) #27	ENSEASG00005035205 #29	PRDX5 (ENSEASG00005031543) #28	ESRRA (ENSEASG00005019938) #30	CATSPERZ (ENSEASG00005019942)	KCNK4 (ENSEASG00005019945) #32	GPR137 (ENSEASG00005019952) #33	ENSEASG00005019956 #34	ENSEASG00005007200
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Suina	ANCESTRAL SPECIES	14	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Chacoan peccary	MODERN SPECIES	921	ENSCWAG00000014285 #8	SAC3D1 (ENSCWAG00000014323)	SNX15 (ENSCWAG00000014357) #9	ARL2 (ENSCWAG00000014404) #10	BATF2 (ENSCWAG00000014448) #11	ENSCWAG00000014497 #12	GPHA2 (ENSCWAG00000014572) #13	PPP2R5B (ENSCWAG00000014618) #14	ATG2A (ENSCWAG00000014681) #15	EHD1 (ENSCWAG00000014779) #16	CDC42BPG (ENSCWAG00000014877) #17	MEN1 (ENSCWAG00000015193) #18	ENSCWAG00000015333 #19	SF1 (ENSCWAG00000015408) #20	PYGM (ENSCWAG00000015625) #21	RASGRP2 (ENSCWAG00000015896) #22	NRXN2 (ENSCWAG00000016249) #23	ENSCWAG00000016777	SLC22A12 (ENSCWAG00000016807) #24	SLC22A11 (ENSCWAG00000016953) #25	RPS6KA4 (ENSCWAG00000017214) #26	CCDC88B (ENSCWAG00000017293) #27	PRDX5 (ENSCWAG00000017609) #28	ENSCWAG00000017664 #29	ESRRA (ENSCWAG00000017713) #30	CATSPERZ (ENSCWAG00000017749)	KCNK4 (ENSCWAG00000017785) #32	GPR137 (ENSCWAG00000017880) #33	BAD (ENSCWAG00000018339) #34	PLCB3 (ENSCWAG00000018376) #35	PPP1R14B (ENSCWAG00000018686) #36
Pig	MODERN SPECIES	10	NAALADL1 (ENSSSCG00000013010) #8	SAC3D1 (ENSSSCG00000013011)	SNX15 (ENSSSCG00000013012) #9	ARL2 (ENSSSCG00000034387) #10	BATF2 (ENSSSCG00000023178) #11	ENSSSCG00000040674 #12	GPHA2 (ENSSSCG00000013015) #13	PPP2R5B (ENSSSCG00000013016) #14	ATG2A (ENSSSCG00000023890) #15	EHD1 (ENSSSCG00000013017) #16	CDC42BPG (ENSSSCG00000013018) #17	MEN1 (ENSSSCG00000013019) #18	MAP4K2 (ENSSSCG00000013020) #19	SF1 (ENSSSCG00000062583) #20	PYGM (ENSSSCG00000013022) #21	RASGRP2 (ENSSSCG00000013023) #22	ENSSSCG00000033229 #23	ENSSSCG00000051519	ENSSSCG00000013024	SLC22A12 (ENSSSCG00000013025) #24	SLC22A11 (ENSSSCG00000020831) #25	RPS6KA4 (ENSSSCG00000028806) #26	ENSSSCG00000013042 #27	PRDX5 (ENSSSCG00000013030) #28	TRMT112 (ENSSSCG00000013029) #29	ESRRA (ENSSSCG00000013028) #30	ENSSSCG00000013027	KCNK4 (ENSSSCG00000013031) #32	GPR137 (ENSSSCG00000013032) #33	BAD (ENSSSCG00000013033) #34	PLCB3 (ENSSSCG00000013034) #35
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Camelidae	ANCESTRAL SPECIES	18	ENSGT00390000010028 #7	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00940000160341 #30	ENSGT00390000009268 #29	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37	ENSGT00940000161844
Arabian camel	MODERN SPECIES	1	CDCA5 (ENSCDRG00005011300) #7	NAALADL1 (ENSCDRG00005011407) #8	SAC3D1 (ENSCDRG00005012291)	SNX15 (ENSCDRG00005012332) #9	ARL2 (ENSCDRG00005012430) #10	BATF2 (ENSCDRG00005012539) #11	ENSCDRG00005012577 #12	GPHA2 (ENSCDRG00005012643) #13	PPP2R5B (ENSCDRG00005012700) #14	ATG2A (ENSCDRG00005012767) #15	CDC42BPG (ENSCDRG00005012877) #17	MEN1 (ENSCDRG00005013054) #18	MAP4K2 (ENSCDRG00005013346) #19	SF1 (ENSCDRG00005015661) #20	PYGM (ENSCDRG00005016305) #21	RASGRP2 (ENSCDRG00005016577) #22	NRXN2 (ENSCDRG00005016748) #23	SLC22A11 (ENSCDRG00005017384) #25	RPS6KA4 (ENSCDRG00005017479) #26	ENSCDRG00005017626 #27	ENSCDRG00005017748 #28	ESRRA (ENSCDRG00005017767) #30	TRMT112 (ENSCDRG00005017791) #29	CATSPERZ (ENSCDRG00005017837)	KCNK4 (ENSCDRG00005017883) #32	GPR137 (ENSCDRG00005017928) #33	BAD (ENSCDRG00005018063) #34	PLCB3 (ENSCDRG00005018129) #35	ENSCDRG00005018394 #36	FKBP2 (ENSCDRG00005018432) #37	VEGFB (ENSCDRG00005018496)
Alpaca	MODERN SPECIES	1734															SF1 (ENSVPAG00000011912) #20	ENSVPAG00000011910 #22
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Pecora	ANCESTRAL SPECIES	13	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.db.a.b #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Yarkand deer	MODERN SPECIES	11	ZFPL1 (ENSCHYG00000003140)	CDCA5 (ENSCHYG00000003127) #7	NAALADL1 (ENSCHYG00000003035) #8	SAC3D1 (ENSCHYG00000002999)	SNX15 (ENSCHYG00000002906) #9	BATF2 (ENSCHYG00000002852) #11	ENSCHYG00000002841 #12	GPHA2 (ENSCHYG00000002826) #13	PPP2R5B (ENSCHYG00000002808) #14	ATG2A (ENSCHYG00000002687) #15	EHD1 (ENSCHYG00000002645) #16	CDC42BPG (ENSCHYG00000002457) #17	MEN1 (ENSCHYG00000002333) #18	MAP4K2 (ENSCHYG00000002224) #19	PYGM (ENSCHYG00000002133) #21	RASGRP2 (ENSCHYG00000002033) #22	NRXN2 (ENSCHYG00000001718) #23	ENSCHYG00000001645	RPS6KA4 (ENSCHYG00000001552) #26	ENSCHYG00000001492 #27	PRDX5 (ENSCHYG00000001406) #28	ENSCHYG00000001363 #29	ESRRA (ENSCHYG00000001346) #30	ENSCHYG00000001317	KCNK4 (ENSCHYG00000001292) #32	GPR137 (ENSCHYG00000001230) #33	BAD (ENSCHYG00000001170) #34	PLCB3 (ENSCHYG00000001034) #35	DNAJC4 (ENSCHYG00000000978)	NUDT22 (ENSCHYG00000000944)	TRPT1 (ENSCHYG00000000921)
Percora_a	ANCESTRAL SPECIES	16	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.db.a.b #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Bovidae	ANCESTRAL SPECIES	16	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.db.a.b #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Bovinae	ANCESTRAL SPECIES	24	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.db.a.b #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074.jb #37
Bos	ANCESTRAL SPECIES	11	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.db.a.b #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074.ib.a #37
Bos_b	ANCESTRAL SPECIES	10	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.db.a.b #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074.jb #37
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005015050	SAC3D1 (ENSBIXG00005015042)	SNX15 (ENSBIXG00005015000) #9	ARL2 (ENSBIXG00005014977) #10	BATF2 (ENSBIXG00005014956) #11	ENSBIXG00005014940 #12	GPHA2 (ENSBIXG00005014925) #13	PPP2R5B (ENSBIXG00005014911) #14	ATG2A (ENSBIXG00005006379) #15	EHD1 (ENSBIXG00005014853) #16	CDC42BPG (ENSBIXG00005014798) #17	MEN1 (ENSBIXG00005014711) #18	MAP4K2 (ENSBIXG00005014576) #19	SF1 (ENSBIXG00005014487) #20	PYGM (ENSBIXG00005014317) #21	RASGRP2 (ENSBIXG00005014221) #22	NRXN2 (ENSBIXG00005014104) #23	SLC22A12 (ENSBIXG00005013917) #24	SLC22A11 (ENSBIXG00005005492) #25	RPS6KA4 (ENSBIXG00005013830) #26	CCDC88B (ENSBIXG00005013708) #27	PRDX5 (ENSBIXG00005013406) #28	ENSBIXG00005013387 #29	ESRRA (ENSBIXG00005005487) #30	CATSPERZ (ENSBIXG00005013368)	KCNK4 (ENSBIXG00005013342) #32	GPR137 (ENSBIXG00005013285) #33	BAD (ENSBIXG00005013255) #34	PLCB3 (ENSBIXG00005013241) #35	ENSBIXG00005013124 #36	FKBP2 (ENSBIXG00005001501) #37
Cow	MODERN SPECIES	21	NAALADL1 (ENSBTAG00000002249) #8	SAC3D1 (ENSBTAG00000002248)	SNX15 (ENSBTAG00000002243) #9	ARL2 (ENSBTAG00000002238) #10	BATF2 (ENSBTAG00000011467) #11	MAJIN (ENSBTAG00000032178)	GPHA2 (ENSBTAG00000007063) #13	PPP2R5B (ENSBTAG00000007061) #14	ATG2A (ENSBTAG00000007058) #15	EHD1 (ENSBTAG00000050712) #16	CDC42BPG (ENSBTAG00000009736) #17	MEN1 (ENSBTAG00000002095) #18	MAP4K2 (ENSBTAG00000001037) #19	SF1 (ENSBTAG00000001035) #20	PYGM (ENSBTAG00000001032) #21	RASGRP2 (ENSBTAG00000001029) #22	NRXN2 (ENSBTAG00000000244) #23	SLC22A12 (ENSBTAG00000018762) #24	SLC22A11 (ENSBTAG00000018792) #25	RPS6KA4 (ENSBTAG00000039153) #26	CCDC88B (ENSBTAG00000040190) #27	PRDX5 (ENSBTAG00000008648) #28	TRMT112 (ENSBTAG00000008646) #29	ESRRA (ENSBTAG00000008645) #30	KCNK4 (ENSBTAG00000008644) #32	GPR137 (ENSBTAG00000012512) #33	BAD (ENSBTAG00000012511) #34	ENSBTAG00000047265 #36	FKBP2 (ENSBTAG00000013606) #37	VEGFB (ENSBTAG00000047567)	DNAJC4 (ENSBTAG00000016560)
Bos_a	ANCESTRAL SPECIES	51	ENSGT00390000010028 #7	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.db.a.b #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000153986.b.b.g.b #33	ENSGT01050000248447	ENSGT00960000191711	ENSGT00940000157074.jb #37	ENSGT00940000161844	ENSGT00510000048574
Wild yak	MODERN SPECIES	625	CDCA5 (ENSBMUG00000003447) #7	SAC3D1 (ENSBMUG00000003474)	NAALADL1 (ENSBMUG00000003615) #8	SNX15 (ENSBMUG00000003708) #9	ARL2 (ENSBMUG00000003741) #10	BATF2 (ENSBMUG00000003774) #11	ENSBMUG00000003803 #12	PPP2R5B (ENSBMUG00000005148) #14	GPHA2 (ENSBMUG00000007370) #13	ATG2A (ENSBMUG00000007401) #15	EHD1 (ENSBMUG00000007421) #16	CDC42BPG (ENSBMUG00000009057) #17	MAP4K2 (ENSBMUG00000013657) #19	SF1 (ENSBMUG00000013946) #20	PYGM (ENSBMUG00000013988) #21	RASGRP2 (ENSBMUG00000014056) #22	NRXN2 (ENSBMUG00000014175) #23	SLC22A12 (ENSBMUG00000014246) #24	SLC22A11 (ENSBMUG00000014266) #25	RPS6KA4 (ENSBMUG00000014301) #26	CCDC88B (ENSBMUG00000014357) #27	PRDX5 (ENSBMUG00000014383) #28	ENSBMUG00000014392 #29	ESRRA (ENSBMUG00000014400) #30	CATSPERZ (ENSBMUG00000014416)
American bison	MODERN SPECIES	3018	NAALADL1 (ENSBBBG00000019468) #8	SAC3D1 (ENSBBBG00000005248)	SNX15 (ENSBBBG00000005268) #9	ARL2 (ENSBBBG00000019526) #10	BATF2 (ENSBBBG00000007671) #11	ENSBBBG00000008780 #12	GPHA2 (ENSBBBG00000005292) #13	PPP2R5B (ENSBBBG00000005297) #14	ATG2A (ENSBBBG00000005317) #15	EHD1 (ENSBBBG00000005330) #16	CDC42BPG (ENSBBBG00000005339) #17	MEN1 (ENSBBBG00000019863) #18	MAP4K2 (ENSBBBG00000019996) #19	SF1 (ENSBBBG00000020069) #20	PYGM (ENSBBBG00000020116) #21	RASGRP2 (ENSBBBG00000008836) #22	ENSBBBG00000005479 #23	ENSBBBG00000005480 #23	SLC22A12 (ENSBBBG00000005486) #24	SLC22A11 (ENSBBBG00000005042) #25	RPS6KA4 (ENSBBBG00000020330) #26	ENSBBBG00000020345 #27	ENSBBBG00000005503	PRDX5 (ENSBBBG00000020354) #28	ESRRA (ENSBBBG00000020380) #30	ENSBBBG00000020388	KCNK4 (ENSBBBG00000020407) #32	GPR137 (ENSBBBG00000000672) #33	BAD (ENSBBBG00000000654) #34	PLCB3 (ENSBBBG00000000517) #35	ENSBBBG00000020436 #36
Caprinae	ANCESTRAL SPECIES	20	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268.db.a.b #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Goat	MODERN SPECIES	21	NAALADL1 (ENSCHIG00000023747) #8	SAC3D1 (ENSCHIG00000017675)	SNX15 (ENSCHIG00000017487) #9	ARL2 (ENSCHIG00000021231) #10	BATF2 (ENSCHIG00000021612) #11	ENSCHIG00000016219	GPHA2 (ENSCHIG00000014857) #13	PPP2R5B (ENSCHIG00000017207) #14	ATG2A (ENSCHIG00000017021) #15	ENSCHIG00000020707 #16	CDC42BPG (ENSCHIG00000019178) #17	MEN1 (ENSCHIG00000013584) #18	MAP4K2 (ENSCHIG00000023718) #19	SF1 (ENSCHIG00000025867) #20	PYGM (ENSCHIG00000011255) #21	RASGRP2 (ENSCHIG00000018460) #22	NRXN2 (ENSCHIG00000020596) #23	SLC22A12 (ENSCHIG00000007682) #24	SLC22A11 (ENSCHIG00000019253) #25	RPS6KA4 (ENSCHIG00000002656) #26	CCDC88B (ENSCHIG00000018997) #27	PRDX5 (ENSCHIG00000010761) #28	ENSCHIG00000023970 #29	ESRRA (ENSCHIG00000015224) #30	KCNK4 (ENSCHIG00000026272) #32	GPR137 (ENSCHIG00000017382) #33	BAD (ENSCHIG00000015400) #34	PLCB3 (ENSCHIG00000019547) #35	ENSCHIG00000019416 #36	ENSCHIG00000026323 #37	VEGFB (ENSCHIG00000024766)
Rambouillet Sheep	MODERN SPECIES	13	NAALADL1 (ENSOARG00020014687) #8	SAC3D1 (ENSOARG00020014619)	SNX15 (ENSOARG00020014402) #9	ARL2 (ENSOARG00020014314) #10	BATF2 (ENSOARG00020014259) #11	ENSOARG00020014188 #12	GPHA2 (ENSOARG00020014142) #13	PPP2R5B (ENSOARG00020013999) #14	ATG2A (ENSOARG00020013895) #15	EHD1 (ENSOARG00020013704) #16	CDC42BPG (ENSOARG00020013165) #17	MEN1 (ENSOARG00020012932) #18	MAP4K2 (ENSOARG00020012366) #19	SF1 (ENSOARG00020011868) #20	PYGM (ENSOARG00020011417) #21	RASGRP2 (ENSOARG00020011246) #22	NRXN2 (ENSOARG00020009999) #23	SLC22A12 (ENSOARG00020009651) #24	RPS6KA4 (ENSOARG00020009027) #26	CCDC88B (ENSOARG00020008588) #27	PRDX5 (ENSOARG00020008296) #28	TRMT112 (ENSOARG00020008195) #29	ESRRA (ENSOARG00020008111) #30	CATSPERZ (ENSOARG00020008042)	KCNK4 (ENSOARG00020007962) #32	GPR137 (ENSOARG00020007778) #33	BAD (ENSOARG00020007741) #34	PLCB3 (ENSOARG00020007260) #35	PPP1R14B (ENSOARG00020007097) #36	ENSOARG00020006995 #37	VEGFB (ENSOARG00020006859)
Siberian musk deer	MODERN SPECIES	1224	NAALADL1 (ENSMMSG00000020530) #8	SAC3D1 (ENSMMSG00000021081)	SNX15 (ENSMMSG00000021100) #9	ARL2 (ENSMMSG00000021128) #10	BATF2 (ENSMMSG00000021171) #11	ENSMMSG00000021197 #12	GPHA2 (ENSMMSG00000021229) #13	PPP2R5B (ENSMMSG00000021265) #14	ENSMMSG00000021321 #15	EHD1 (ENSMMSG00000021345) #16	CDC42BPG (ENSMMSG00000021417) #17	MEN1 (ENSMMSG00000021571) #18	MAP4K2 (ENSMMSG00000021654) #19	SF1 (ENSMMSG00000021777) #20	PYGM (ENSMMSG00000021986) #21	RASGRP2 (ENSMMSG00000022120) #22	NRXN2 (ENSMMSG00000022239) #23	SLC22A12 (ENSMMSG00000022436) #24	ENSMMSG00000022514 #25	RPS6KA4 (ENSMMSG00000022543) #26	CCDC88B (ENSMMSG00000022578) #27	PRDX5 (ENSMMSG00000022654) #28	ENSMMSG00000022703 #29	ESRRA (ENSMMSG00000022716) #30	CATSPERZ (ENSMMSG00000022730)	KCNK4 (ENSMMSG00000022748) #32	GPR137 (ENSMMSG00000022771) #33	BAD (ENSMMSG00000022809) #34	PLCB3 (ENSMMSG00000022830) #35	ENSMMSG00000022898 #36	FKBP2 (ENSMMSG00000022911) #37
Cetacea	ANCESTRAL SPECIES	4	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Blue whale	MODERN SPECIES	19	CDCA5 (ENSBMSG00010009053) #7	ENSBMSG00010009047 #8	SAC3D1 (ENSBMSG00010009036)	SNX15 (ENSBMSG00010009011) #9	BATF2 (ENSBMSG00010008995) #11	ENSBMSG00010008983 #12	GPHA2 (ENSBMSG00010008965) #13	PPP2R5B (ENSBMSG00010008947) #14	ATG2A (ENSBMSG00010008888) #15	EHD1 (ENSBMSG00010008846) #16	CDC42BPG (ENSBMSG00010008804) #17	MEN1 (ENSBMSG00010008735) #18	MAP4K2 (ENSBMSG00010008681) #19	SF1 (ENSBMSG00010008646) #20	PYGM (ENSBMSG00010011700) #21	RASGRP2 (ENSBMSG00010011615) #22	NRXN2 (ENSBMSG00010011491) #23	ENSBMSG00010011333 #25	ENSBMSG00010011311	RPS6KA4 (ENSBMSG00010011289) #26	ENSBMSG00010011248 #27	PRDX5 (ENSBMSG00010011153) #28	TRMT112 (ENSBMSG00010011127) #29	ESRRA (ENSBMSG00010011104) #30	CATSPERZ (ENSBMSG00010011077)	KCNK4 (ENSBMSG00010011057) #32	GPR137 (ENSBMSG00010011028) #33	BAD (ENSBMSG00010011016) #34	PLCB3 (ENSBMSG00010010890) #35	ENSBMSG00010010781	ENSBMSG00010010693 #37
Odontoceti	ANCESTRAL SPECIES	4	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Dolphin	MODERN SPECIES	2616					BATF2 (ENSTTRG00000008902) #11	MAJIN (ENSTTRG00000008899) #12	GPHA2 (ENSTTRG00000008897) #13	PPP2R5B (ENSTTRG00000008895) #14	ATG2A (ENSTTRG00000008891) #15	EHD1 (ENSTTRG00000008887) #16	CDC42BPG (ENSTTRG00000008879) #17	MEN1 (ENSTTRG00000008874) #18	MAP4K2 (ENSTTRG00000008866) #19	SF1 (ENSTTRG00000008857) #20	PYGM (ENSTTRG00000008842) #21	RASGRP2 (ENSTTRG00000008810) #22	NRXN2 (ENSTTRG00000008750) #23	ENSTTRG00000008738 #24
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37	ENSGT00940000161844
Vaquita	MODERN SPECIES	19	NAALADL1 (ENSPSNG00000007784) #8	SAC3D1 (ENSPSNG00000007706)	SNX15 (ENSPSNG00000007660) #9	ARL2 (ENSPSNG00000007612) #10	BATF2 (ENSPSNG00000007581) #11	ENSPSNG00000007531 #12	GPHA2 (ENSPSNG00000007493) #13	PPP2R5B (ENSPSNG00000007462) #14	ATG2A (ENSPSNG00000007230) #15	EHD1 (ENSPSNG00000007142) #16	CDC42BPG (ENSPSNG00000006994) #17	MEN1 (ENSPSNG00000006876) #18	MAP4K2 (ENSPSNG00000006824) #19	SF1 (ENSPSNG00000006668) #20	PYGM (ENSPSNG00000006467) #21	RASGRP2 (ENSPSNG00000006329) #22	NRXN2 (ENSPSNG00000006023) #23	ENSPSNG00000005896 #25	RPS6KA4 (ENSPSNG00000005849) #26	ENSPSNG00000005767 #27	PRDX5 (ENSPSNG00000005705) #28	TRMT112 (ENSPSNG00000005662) #29	ESRRA (ENSPSNG00000005626) #30	CATSPERZ (ENSPSNG00000005595)	KCNK4 (ENSPSNG00000005570) #32	GPR137 (ENSPSNG00000005522) #33	BAD (ENSPSNG00000005491) #34	PLCB3 (ENSPSNG00000005194) #35	PPP1R14B (ENSPSNG00000005105) #36	FKBP2 (ENSPSNG00000005083) #37	VEGFB (ENSPSNG00000005057)
Monodontidae	ANCESTRAL SPECIES	2	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b.h #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37	ENSGT00940000161844
Narwhal	MODERN SPECIES	314	NAALADL1 (ENSMMNG00015020845) #8	SAC3D1 (ENSMMNG00015020768)	SNX15 (ENSMMNG00015020749) #9	ARL2 (ENSMMNG00015020724) #10	BATF2 (ENSMMNG00015020660) #11	ENSMMNG00015020643 #12	GPHA2 (ENSMMNG00015020632) #13	PPP2R5B (ENSMMNG00015020603) #14	ATG2A (ENSMMNG00015020534) #15	EHD1 (ENSMMNG00015020471) #16	CDC42BPG (ENSMMNG00015020396) #17	MEN1 (ENSMMNG00015020359) #18	MAP4K2 (ENSMMNG00015020284) #19	SF1 (ENSMMNG00015020086) #20	PYGM (ENSMMNG00015019854) #21	RASGRP2 (ENSMMNG00015019737) #22	NRXN2 (ENSMMNG00015019537) #23	ENSMMNG00015019399 #25	RPS6KA4 (ENSMMNG00015019279) #26	CCDC88B (ENSMMNG00015019138) #27	PRDX5 (ENSMMNG00015019013) #28	TRMT112 (ENSMMNG00015018957) #29	ESRRA (ENSMMNG00015018934) #30	CATSPERZ (ENSMMNG00015018896)	KCNK4 (ENSMMNG00015018861) #32	GPR137 (ENSMMNG00015018746) #33	BAD (ENSMMNG00015018684) #34	PLCB3 (ENSMMNG00015018509) #35	PPP1R14B (ENSMMNG00015018437) #36	FKBP2 (ENSMMNG00015018380) #37	VEGFB (ENSMMNG00015018347)
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	7	NAALADL1 (ENSDLEG00000003969) #8	SAC3D1 (ENSDLEG00000004004)	SNX15 (ENSDLEG00000004011) #9	ARL2 (ENSDLEG00000004021) #10	BATF2 (ENSDLEG00000004028) #11	ENSDLEG00000007912 #12	GPHA2 (ENSDLEG00000007926) #13	PPP2R5B (ENSDLEG00000007937) #14	ATG2A (ENSDLEG00000007960) #15	EHD1 (ENSDLEG00000007999) #16	CDC42BPG (ENSDLEG00000008027) #17	MEN1 (ENSDLEG00000008353) #18	MAP4K2 (ENSDLEG00000008407) #19	SF1 (ENSDLEG00000008613) #20	PYGM (ENSDLEG00000008663) #21	ENSDLEG00000008717 #22	ENSDLEG00000008744 #22	NRXN2 (ENSDLEG00000009512) #23	ENSDLEG00000016044 #25	RPS6KA4 (ENSDLEG00000016049) #26	CCDC88B (ENSDLEG00000016080) #27	PRDX5 (ENSDLEG00000016104) #28	TRMT112 (ENSDLEG00000016111) #29	ESRRA (ENSDLEG00000016114) #30	CATSPERZ (ENSDLEG00000016124)	KCNK4 (ENSDLEG00000016130) #32	GPR137 (ENSDLEG00000016138) #33	BAD (ENSDLEG00000016155) #34	PLCB3 (ENSDLEG00000016212) #35	PPP1R14B (ENSDLEG00000016552) #36	ENSDLEG00000016593 #37
Beluga whale	MODERN SPECIES	7	SAC3D1 (ENSDLEG00000004004)	SNX15 (ENSDLEG00000004011) #9	ARL2 (ENSDLEG00000004021) #10	BATF2 (ENSDLEG00000004028) #11	ENSDLEG00000007912 #12	GPHA2 (ENSDLEG00000007926) #13	PPP2R5B (ENSDLEG00000007937) #14	ATG2A (ENSDLEG00000007960) #15	EHD1 (ENSDLEG00000007999) #16	CDC42BPG (ENSDLEG00000008027) #17	MEN1 (ENSDLEG00000008353) #18	MAP4K2 (ENSDLEG00000008407) #19	SF1 (ENSDLEG00000008613) #20	PYGM (ENSDLEG00000008663) #21	ENSDLEG00000008717 #22	ENSDLEG00000008744 #22	NRXN2 (ENSDLEG00000009512) #23	ENSDLEG00000016044 #25	RPS6KA4 (ENSDLEG00000016049) #26	CCDC88B (ENSDLEG00000016080) #27	PRDX5 (ENSDLEG00000016104) #28	TRMT112 (ENSDLEG00000016111) #29	ESRRA (ENSDLEG00000016114) #30	CATSPERZ (ENSDLEG00000016124)	KCNK4 (ENSDLEG00000016130) #32	GPR137 (ENSDLEG00000016138) #33	BAD (ENSDLEG00000016155) #34	PLCB3 (ENSDLEG00000016212) #35	PPP1R14B (ENSDLEG00000016552) #36	ENSDLEG00000016593 #37	VEGFB (ENSDLEG00000016605)
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	918															PYGM (ENSPCTG00005019051) #21	ENSPCTG00005018966 #22	ENSPCTG00005018888 #22
Sperm whale	MODERN SPECIES	918														PYGM (ENSPCTG00005019051) #21	ENSPCTG00005018966 #22	ENSPCTG00005018888 #22
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Xenarthra	ANCESTRAL SPECIES	7	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000163267 #25
Sloth	MODERN SPECIES	5566																ENSCHOG00000011269 #22
Armadillo	MODERN SPECIES	3881	CDCA5 (ENSDNOG00000045301) #7	NAALADL1 (ENSDNOG00000046527) #8	SAC3D1 (ENSDNOG00000011962)	SNX15 (ENSDNOG00000011970) #9	ARL2 (ENSDNOG00000025275) #10	BATF2 (ENSDNOG00000039169) #11	MAJIN (ENSDNOG00000006152) #12	PPP2R5B (ENSDNOG00000003422) #14	ATG2A (ENSDNOG00000003400) #15	EHD1 (ENSDNOG00000017834) #16	CDC42BPG (ENSDNOG00000031816) #17	MEN1 (ENSDNOG00000003348) #18	MAP4K2 (ENSDNOG00000031855) #19	SF1 (ENSDNOG00000001282) #20	PYGM (ENSDNOG00000001276) #21	RASGRP2 (ENSDNOG00000017807) #22	NRXN2 (ENSDNOG00000004770) #23	SLC22A11 (ENSDNOG00000036687) #25
Afrotheria	ANCESTRAL SPECIES	9	ENSGT00390000010028 #7	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Tenrec	MODERN SPECIES	5422																ENSETEG00000015612 #22
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT00390000010028 #7	ENSGT01030000234598.b.b #8	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162485 #24	ENSGT00940000163267 #25	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00400000022853	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00390000010740 #34	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36	ENSGT00940000157074 #37
Elephant	MODERN SPECIES	532	ENSLAFG00000022887	ZFPL1 (ENSLAFG00000001682)	ENSLAFG00000001680 #7	SAC3D1 (ENSLAFG00000022348)	SNX15 (ENSLAFG00000015167) #9	ARL2 (ENSLAFG00000020731) #10	MAJIN (ENSLAFG00000008074) #12	GPHA2 (ENSLAFG00000008073) #13	PPP2R5B (ENSLAFG00000008069) #14	ATG2A (ENSLAFG00000008451) #15	EHD1 (ENSLAFG00000011643) #16	CDC42BPG (ENSLAFG00000008882) #17	MEN1 (ENSLAFG00000031374) #18	SF1 (ENSLAFG00000007201) #20	PYGM (ENSLAFG00000017090) #21	RASGRP2 (ENSLAFG00000014550) #22	NRXN2 (ENSLAFG00000002103) #23	ENSLAFG00000029715	SLC22A12 (ENSLAFG00000004533) #24	SLC22A11 (ENSLAFG00000028688) #25	RPS6KA4 (ENSLAFG00000008921) #26	CCDC88B (ENSLAFG00000030165) #27	ENSLAFG00000032572	PRDX5 (ENSLAFG00000025661) #28	TRMT112 (ENSLAFG00000029149) #29	ESRRA (ENSLAFG00000026176) #30	CATSPERZ (ENSLAFG00000023390)	KCNK4 (ENSLAFG00000011590) #32	GPR137 (ENSLAFG00000011589) #33	BAD (ENSLAFG00000021738) #34	PLCB3 (ENSLAFG00000009090) #35
Hyrax	MODERN SPECIES	5276											CDC42BPG (ENSPCAG00000013954) #17	MEN1 (ENSPCAG00000013903) #18	MAP4K2 (ENSPCAG00000013702) #19	SF1 (ENSPCAG00000013631) #20	PYGM (ENSPCAG00000013528) #21	RASGRP2 (ENSPCAG00000013415) #22
Marsupialia	ANCESTRAL SPECIES	12	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00940000157004.b	ENSGT00620000087966.b #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000154292.a.b	ENSGT00940000163749	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00940000171135 #31	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00940000165892	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00940000157004.b	ENSGT00620000087966.b.i #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000154292.a.b	ENSGT00940000163749	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00940000171135 #31	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00940000165892	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Diprotodontia	ANCESTRAL SPECIES	26	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00940000157004.b	ENSGT00620000087966.b.i #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000154292.a.b	ENSGT00940000163749	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00940000171135 #31	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00940000165892	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00940000160988	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000162373 #11	ENSGT00390000007971 #12	ENSGT00390000009379 #13	ENSGT01030000234620.a.b.b.a #14	ENSGT00940000157004.b	ENSGT00620000087966.b.i #15	ENSGT00940000158249 #16	ENSGT01030000234517.G #17	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000154292.a.b	ENSGT00940000163749	ENSGT00940000162485 #24	ENSGT00940000161083 #26	ENSGT00940000162048 #27	ENSGT00390000018173 #28	ENSGT00390000009268 #29	ENSGT00940000160341 #30	ENSGT00940000171135 #31	ENSGT00940000160310 #32	ENSGT00940000153986.b.b #33	ENSGT00940000165892	ENSGT00940000160539 #35	ENSGT00950000182985.b.b #36
Common wonbat	MODERN SPECIES	714	SAC3D1 (ENSVURG00010002869)	SNX15 (ENSVURG00010002880) #9	ARL2 (ENSVURG00010002893) #10	ENSVURG00010002907 #11	ENSVURG00010002912 #12	GPHA2 (ENSVURG00010002922) #13	PPP2R5B (ENSVURG00010002954) #14	ENSVURG00010002980	ATG2A (ENSVURG00010003008) #15	EHD1 (ENSVURG00010003087) #16	CDC42BPG (ENSVURG00010003122) #17	MEN1 (ENSVURG00010003169) #18	MAP4K2 (ENSVURG00010003311) #19	SF1 (ENSVURG00010003379) #20	PYGM (ENSVURG00010003505) #21	RASGRP2 (ENSVURG00010003531) #22	ENSVURG00010003553 #23	ENSVURG00010003574 #23	ENSVURG00010003623	SLC22A12 (ENSVURG00010003693) #24	RPS6KA4 (ENSVURG00010004562) #26	CCDC88B (ENSVURG00010004638) #27	PRDX5 (ENSVURG00010004670) #28	ENSVURG00010004677 #29	ESRRA (ENSVURG00010004699) #30	ENSVURG00010004706 #31	KCNK4 (ENSVURG00010004722) #32	GPR137 (ENSVURG00010004814) #33	ENSVURG00010004835	PLCB3 (ENSVURG00010004855) #35	ENSVURG00010004927 #36
koala	MODERN SPECIES	179	SAC3D1 (ENSPCIG00000007743)	SNX15 (ENSPCIG00000007745) #9	ARL2 (ENSPCIG00000007748) #10	ENSPCIG00000031561 #11	ENSPCIG00000032647	GPHA2 (ENSPCIG00000036905) #13	PPP2R5B (ENSPCIG00000017005) #14	ENSPCIG00000017395	ATG2A (ENSPCIG00000017398) #15	EHD1 (ENSPCIG00000014850) #16	CDC42BPG (ENSPCIG00000014947) #17	MEN1 (ENSPCIG00000017717) #18	MAP4K2 (ENSPCIG00000017746) #19	SF1 (ENSPCIG00000018173) #20	PYGM (ENSPCIG00000018174) #21	RASGRP2 (ENSPCIG00000018176) #22	NRXN2 (ENSPCIG00000016766) #23	SLC22A12 (ENSPCIG00000008000) #24	RPS6KA4 (ENSPCIG00000008010) #26	CCDC88B (ENSPCIG00000008021) #27	PRDX5 (ENSPCIG00000008029) #28	TRMT112 (ENSPCIG00000008032) #29	ESRRA (ENSPCIG00000008034) #30	KCNK4 (ENSPCIG00000008035) #32	GPR137 (ENSPCIG00000008037) #33	ENSPCIG00000008038	PLCB3 (ENSPCIG00000008044) #35	PPP1R14B (ENSPCIG00000008053) #36	FKBP2 (ENSPCIG00000008054) #37	ENSPCIG00000008055	ENSPCIG00000008056
Wallaby	MODERN SPECIES	7502																RASGRP2 (ENSMEUG00000011399) #22
Tasmanian devil	MODERN SPECIES	5	ENSSHAG00000022402 #8	SNX15 (ENSSHAG00000003231) #9	ARL2 (ENSSHAG00000003390) #10	ENSSHAG00000024024 #12	GPHA2 (ENSSHAG00000031098) #13	ENSSHAG00000025285	PPP2R5B (ENSSHAG00000023409) #14	ENSSHAG00000004589	ENSSHAG00000022114 #15	ENSSHAG00000004798 #15	EHD1 (ENSSHAG00000022915) #16	CDC42BPG (ENSSHAG00000021957) #17	ENSSHAG00000006454 #18	SF1 (ENSSHAG00000006841) #20	PYGM (ENSSHAG00000007037) #21	RASGRP2 (ENSSHAG00000007269) #22	ENSSHAG00000025843 #23	ENSSHAG00000027363 #23	ENSSHAG00000022869	SLC22A12 (ENSSHAG00000024212) #24	RPS6KA4 (ENSSHAG00000003415) #26	CCDC88B (ENSSHAG00000002138) #27	PRDX5 (ENSSHAG00000000833) #28	ESRRA (ENSSHAG00000022908) #30	ENSSHAG00000028576 #29	GPR137 (ENSSHAG00000005394) #33	KCNK4 (ENSSHAG00000023255) #32	ENSSHAG00000021358	PLCB3 (ENSSHAG00000004792) #35	PPP1R14B (ENSSHAG00000031614) #36	FKBP2 (ENSSHAG00000022630) #37
Platypus	MODERN SPECIES	14	TMEM262 (ENSOANG00000042840)	ZFPL1 (ENSOANG00000044300)	ENSOANG00000047291	ENSOANG00000037309 #9	ARL2 (ENSOANG00000038244) #10	ENSOANG00000044018 #11	GPHA2 (ENSOANG00000038607) #13	PPP2R5B (ENSOANG00000044335) #14	ATG2A (ENSOANG00000043855) #15	EHD1 (ENSOANG00000050176) #16	CDC42BPG (ENSOANG00000008357) #17	MEN1 (ENSOANG00000049752) #18	MAP4K2 (ENSOANG00000009273) #19	SF1 (ENSOANG00000002909) #20	PYGM (ENSOANG00000013714) #21	RASGRP2 (ENSOANG00000007479) #22	NRXN2 (ENSOANG00000045579) #23	ENSOANG00000048677	ENSOANG00000039525	TMEM86A (ENSOANG00000049158)	SPTY2D1 (ENSOANG00000051208)	UEVLD (ENSOANG00000050347)	TSG101 (ENSOANG00000008368)	ENSOANG00000008367	LDHA (ENSOANG00000048733)	GTF2H1 (ENSOANG00000014982)	HPS5 (ENSOANG00000044228)	ENSOANG00000044149	ENSOANG00000000595	SAAL1 (ENSOANG00000000809)	ENSOANG00000000811
Sauria	ANCESTRAL SPECIES	40	ENSGT01000000214440.C	ENSGT00390000015119	ENSGT00640000091486.a	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000161064	ENSGT00940000158735	ENSGT00940000160644	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT01090000260186	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00930000151054	ENSGT01030000234517.G #17	ENSGT00940000158249 #16	ENSGT00620000087966.b #15	ENSGT01030000234620.a.b.b.a #14	ENSGT00390000009379 #13	ENSGT00940000162373 #11	ENSGT00940000157941 #10	ENSGT00940000160125 #9	ENSGT00940000160988	ENSGT01030000234598.b.b #8
Archelosauria	ANCESTRAL SPECIES	38	ENSGT00940000153968.a.b.b.b	ENSGT00390000004124	ENSGT00940000179094	ENSGT00420000030375.b	ENSGT00940000158847.d	ENSGT00940000154421	ENSGT00940000157436	ENSGT00940000159785	ENSGT00390000018647	ENSGT00940000154348.c.a.b.b	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00930000151054	ENSGT01030000234517.G #17	ENSGT00940000158249 #16	ENSGT00940000156764.b	ENSGT00620000087966.b #15	ENSGT00940000157004	ENSGT00940000154901.C.b.f.a	ENSGT01030000234620.a.b.b.a #14	ENSGT00390000009379 #13	ENSGT00940000162373 #11	ENSGT00940000157941 #10
Cryptodira	ANCESTRAL SPECIES	17	ENSGT00390000018647	ENSGT00940000154348.c.a.b.b	ENSGT00940000154421	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000160644	ENSGT00940000158735	ENSGT00940000161064	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162651	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00930000151054	ENSGT01030000234517.G #17	ENSGT00940000158249 #16	ENSGT00940000156764.b	ENSGT00620000087966.b #15	ENSGT00940000157004	ENSGT00940000154901.C.b.f.a	ENSGT01030000234620.a.b.b.a #14	ENSGT00390000009379 #13	ENSGT00940000162373 #11
Chinese turtle	MODERN SPECIES	1726	ENSPSIG00000003473	ENSPSIG00000003477	ENSPSIG00000003479	FAM89B (ENSPSIG00000003483)	EHBP1L1 (ENSPSIG00000003489)	ENSPSIG00000003525	SIPA1 (ENSPSIG00000003531)	PCNX3 (ENSPSIG00000003563)	MAP3K11 (ENSPSIG00000003575)	ENSPSIG00000003578	ENSPSIG00000003582	MEN1 (ENSPSIG00000003586) #18	MAP4K2 (ENSPSIG00000003595) #19	SF1 (ENSPSIG00000003610) #20	PYGM (ENSPSIG00000003616) #21	RASGRP2 (ENSPSIG00000003684) #22	NRXN2 (ENSPSIG00000003726) #23	TIGD3 (ENSPSIG00000001900)	FRMD8 (ENSPSIG00000003850)
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000154348.c.a.b.b	ENSGT00940000154421	ENSGT01010000227101	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000160644	ENSGT00940000158735	ENSGT00940000161064	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162651	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00930000151054	ENSGT01030000234517.G.g.a #17	ENSGT00940000158249 #16	ENSGT00940000156764.b	ENSGT00620000087966.b #15	ENSGT00940000157004	ENSGT00940000154901.C.b.f.a	ENSGT01030000234620.a.b.b.a #14	ENSGT00390000009379 #13	ENSGT00940000162373 #11
Testudinidae	ANCESTRAL SPECIES	5	ENSGT00940000153104.g.a	ENSGT01010000227101	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000160644	ENSGT00940000158735	ENSGT00940000161064	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250.e #19	ENSGT00940000162250.f #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000162651	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00930000151054	ENSGT01030000234517.G.g.a #17	ENSGT00940000158249 #16	ENSGT00940000156764.b	ENSGT00620000087966.b #15	ENSGT00940000157004.c	ENSGT00940000154901.C.b.f.a	ENSGT01030000234620.a.b.b.a #14	ENSGT00390000009379 #13	ENSGT00940000162373 #11	ENSGT00940000164485
Goode s thornscrub tortoise	MODERN SPECIES	21	ENSGEVG00005012162	ZNRD2 (ENSGEVG00005012185)	FAM89B (ENSGEVG00005012202)	EHBP1L1 (ENSGEVG00005012233)	ENSGEVG00005012273	SIPA1 (ENSGEVG00005012326)	PCNX3 (ENSGEVG00005012424)	MAP3K11 (ENSGEVG00005012480)	ENSGEVG00005012567	ENSGEVG00005012622	MEN1 (ENSGEVG00005012899) #18	ENSGEVG00005012929 #19	ENSGEVG00005003997 #19	SF1 (ENSGEVG00005004015) #20	PYGM (ENSGEVG00005004026) #21	RASGRP2 (ENSGEVG00005004049) #22	NRXN2 (ENSGEVG00005004097) #23	TIGD3 (ENSGEVG00005004239)	SLC25A45 (ENSGEVG00005004262)	FRMD8 (ENSGEVG00005004293)	SCYL1 (ENSGEVG00005004349)	CDC42BPG (ENSGEVG00005004892) #17	EHD1 (ENSGEVG00005006756) #16	ENSGEVG00005006823	ENSGEVG00005006992	ATG2A (ENSGEVG00005007119) #15	ENSGEVG00005007459	ENSGEVG00005007657	PPP2R5B (ENSGEVG00005007911) #14	GPHA2 (ENSGEVG00005007948) #13	ENSGEVG00005007984 #11
Abingdon island giant tortoise	MODERN SPECIES	142	ENSCABG00000021613	ENSCABG00000021609	ZNRD2 (ENSCABG00000021606)	ENSCABG00000021605	EHBP1L1 (ENSCABG00000021601)	ENSCABG00000021597	SIPA1 (ENSCABG00000021585)	PCNX3 (ENSCABG00000021498)	MAP3K11 (ENSCABG00000021494)	ENSCABG00000021493	ENSCABG00000021492	MEN1 (ENSCABG00000021491) #18	MAP4K2 (ENSCABG00000021490) #19	SF1 (ENSCABG00000021488) #20	PYGM (ENSCABG00000021487) #21	RASGRP2 (ENSCABG00000021483) #22	ENSCABG00000021480	ENSCABG00000021479	ENSCABG00000021478	NRXN2 (ENSCABG00000021473) #23	TIGD3 (ENSCABG00000021472)	SLC25A45 (ENSCABG00000021471)	FRMD8 (ENSCABG00000021464)	SCYL1 (ENSCABG00000021458)	ENSCABG00000021454 #17	ENSCABG00000021449 #17	EHD1 (ENSCABG00000021446) #16	ENSCABG00000021442	ENSCABG00000021439	ENSCABG00000021438	ATG2A (ENSCABG00000021434) #15
Emydidae	ANCESTRAL SPECIES	9	ENSGT00940000154348.c.a.b.b	ENSGT00940000154421	ENSGT01010000227101	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000160644	ENSGT00940000158735	ENSGT00940000161064	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000162651	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00930000151054	ENSGT01030000234517.G.g.a #17	ENSGT00940000158249 #16	ENSGT00940000156810	ENSGT00940000157923	ENSGT00940000156764.a	ENSGT00390000008003	ENSGT00940000156058	ENSGT00390000003188	ENSGT00940000162190
Three-toed box turtle	MODERN SPECIES	33	ENSTMTG00000006132	ENSTMTG00000006110	ZNRD2 (ENSTMTG00000006101)	ENSTMTG00000006089	EHBP1L1 (ENSTMTG00000005971)	ENSTMTG00000005861	SIPA1 (ENSTMTG00000005815)	PCNX3 (ENSTMTG00000003486)	ENSTMTG00000003316	ENSTMTG00000003302	LTBP3 (ENSTMTG00000003225)	MEN1 (ENSTMTG00000003205) #18	MAP4K2 (ENSTMTG00000003113) #19	SF1 (ENSTMTG00000003098) #20	PYGM (ENSTMTG00000004218) #21	RASGRP2 (ENSTMTG00000004104) #22	ENSTMTG00000004089	NRXN2 (ENSTMTG00000003926) #23	TIGD3 (ENSTMTG00000003902)	SLC25A45 (ENSTMTG00000003882)	FRMD8 (ENSTMTG00000003858)	SCYL1 (ENSTMTG00000003827)	CDC42BPG (ENSTMTG00000002953) #17	EHD1 (ENSTMTG00000002871) #16	ENSTMTG00000002834	ENSTMTG00000002823	ATG2A (ENSTMTG00000002761) #15	ENSTMTG00000002676	ENSTMTG00000002660	PPP2R5B (ENSTMTG00000002653) #14	GPHA2 (ENSTMTG00000002649) #13
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	2386	ENSCPBG00000023800	ENSCPBG00000023797	ENSCPBG00000023796	ZNRD2 (ENSCPBG00000023795)	FAM89B (ENSCPBG00000023794)	EHBP1L1 (ENSCPBG00000023783)	ENSCPBG00000023780	SIPA1 (ENSCPBG00000023770)	PCNX3 (ENSCPBG00000023769)	MAP3K11 (ENSCPBG00000023768)	LTBP3 (ENSCPBG00000023767)	MEN1 (ENSCPBG00000023765) #18	MAP4K2 (ENSCPBG00000023764) #19	SF1 (ENSCPBG00000023763) #20	PYGM (ENSCPBG00000023761) #21	ENSCPBG00000023760 #22	ENSCPBG00000023759 #22	ENSCPBG00000023758	NRXN2 (ENSCPBG00000023756) #23	TIGD3 (ENSCPBG00000023755)	SLC25A45 (ENSCPBG00000023754)	FRMD8 (ENSCPBG00000023753)	SCYL1 (ENSCPBG00000023747)	ENSCPBG00000023704 #17	ENSCPBG00000023696 #17	ENSCPBG00000023693 #17	EHD1 (ENSCPBG00000023692) #16	ENSCPBG00000023687	ENSCPBG00000023685	ATG2A (ENSCPBG00000023681) #15	ENSCPBG00000023679
painted turtle	MODERN SPECIES	2386	ENSCPBG00000023797	ENSCPBG00000023796	ZNRD2 (ENSCPBG00000023795)	FAM89B (ENSCPBG00000023794)	EHBP1L1 (ENSCPBG00000023783)	ENSCPBG00000023780	SIPA1 (ENSCPBG00000023770)	PCNX3 (ENSCPBG00000023769)	MAP3K11 (ENSCPBG00000023768)	LTBP3 (ENSCPBG00000023767)	MEN1 (ENSCPBG00000023765) #18	MAP4K2 (ENSCPBG00000023764) #19	SF1 (ENSCPBG00000023763) #20	PYGM (ENSCPBG00000023761) #21	ENSCPBG00000023760 #22	ENSCPBG00000023759 #22	ENSCPBG00000023758	NRXN2 (ENSCPBG00000023756) #23	TIGD3 (ENSCPBG00000023755)	SLC25A45 (ENSCPBG00000023754)	FRMD8 (ENSCPBG00000023753)	SCYL1 (ENSCPBG00000023747)	ENSCPBG00000023704 #17	ENSCPBG00000023696 #17	ENSCPBG00000023693 #17	EHD1 (ENSCPBG00000023692) #16	ENSCPBG00000023687	ENSCPBG00000023685	ATG2A (ENSCPBG00000023681) #15	ENSCPBG00000023679	ENSCPBG00000023677
Lepidosauria	ANCESTRAL SPECIES	107		ENSGT00640000091486.a	ENSGT00510000048151	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000161064	ENSGT00940000158735	ENSGT00940000160644	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00930000151054	ENSGT01030000234517.G #17	ENSGT00940000158249 #16	ENSGT00620000087966.b #15	ENSGT00940000154901.C.b.f.a	ENSGT01030000234620.a.b.b.a #14	ENSGT00390000009379 #13
tuatara	MODERN SPECIES	1837												MAP4K2 (ENSSPUG00000012733) #19	SF1 (ENSSPUG00000012907) #20	ENSSPUG00000012932 #21	ENSSPUG00000012938 #21	RASGRP2 (ENSSPUG00000012960) #22	ENSSPUG00000013173 #23
Episquamata	ANCESTRAL SPECIES	28	ENSGT00390000018613.b	ENSGT00640000091486.a	ENSGT00510000048151	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000161064	ENSGT00940000158735	ENSGT00940000160644	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00930000151054	ENSGT01030000234517.G #17	ENSGT00940000158249 #16	ENSGT00620000087966.b #15	ENSGT00940000154901.C.b.f.a	ENSGT01030000234620.a.b.b.a #14	ENSGT00390000009379 #13	ENSGT00940000164485	ENSGT00940000160125 #9	ENSGT00940000157941 #10	ENSGT00940000160988
Laterata	ANCESTRAL SPECIES	60					ENSGT00390000010028 #7	ENSGT00390000009753	ENSGT00390000001738	ENSGT00940000162464	ENSGT00390000000417.a.a.b.a.a.b	ENSGT00390000017147	ENSGT00390000007479	ENSGT00390000017253	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000161002	ENSGT00530000063721.B	ENSGT00390000003837	ENSGT00930000151054	ENSGT01030000234517.G #17	ENSGT00940000158249 #16	ENSGT00620000087966.b #15	ENSGT00940000154901.C.b.f.a	ENSGT01030000234620.a.b.b.a #14	ENSGT00390000009379 #13	ENSGT00940000164485	ENSGT00940000160125 #9	ENSGT00940000157941 #10
Common wall lizard	MODERN SPECIES	7	POLA2 (ENSPMRG00000015344)	ENSPMRG00000015363	CDCA5 (ENSPMRG00000015393) #7	ZFPL1 (ENSPMRG00000015397)	VPS51 (ENSPMRG00000015399)	ENSPMRG00000015412	TM7SF2 (ENSPMRG00000015418)	ZNHIT2 (ENSPMRG00000015430)	FAU (ENSPMRG00000015437)	ENSPMRG00000015443	ENSPMRG00000015451	MAP4K2 (ENSPMRG00000015521) #19	SF1 (ENSPMRG00000015892) #20	PYGM (ENSPMRG00000015911) #21	ENSPMRG00000015931	RASGRP2 (ENSPMRG00000015942) #22	NRXN2 (ENSPMRG00000016063) #23	SLC25A45 (ENSPMRG00000016486)	FRMD8 (ENSPMRG00000016497)	ENSPMRG00000016509	ENSPMRG00000016527	ENSPMRG00000016533	SCYL1 (ENSPMRG00000016541)	CDC42BPG (ENSPMRG00000016721) #17	EHD1 (ENSPMRG00000018098) #16	ATG2A (ENSPMRG00000018117) #15	ENSPMRG00000018145	PPP2R5B (ENSPMRG00000018160) #14	ENSPMRG00000018169	ENSPMRG00000018172	SNX15 (ENSPMRG00000018184) #9
Argentine black and white tegu	MODERN SPECIES	144	POLR3C (ENSSMRG00000010880)	ENSSMRG00000010877	KLHDC9 (ENSSMRG00000010876)	PFDN2 (ENSSMRG00000010875)	NIT1 (ENSSMRG00000010874)	ENSSMRG00000010871	SART1 (ENSSMRG00000010864)	EIF1AD (ENSSMRG00000010859)	ENSSMRG00000010853	BANF1 (ENSSMRG00000010848)	TAF6L (ENSSMRG00000010847)	TMEM179B (ENSSMRG00000010845)	MAP4K2 (ENSSMRG00000010824) #19	SF1 (ENSSMRG00000010812) #20	PYGM (ENSSMRG00000010803) #21	RASGRP2 (ENSSMRG00000010787) #22	ENSSMRG00000010715	NRXN2 (ENSSMRG00000010672) #23	SLC25A45 (ENSSMRG00000010646)	FRMD8 (ENSSMRG00000010642)	PRRC1 (ENSSMRG00000010633)	SCYL1 (ENSSMRG00000010627)	CDC42BPG (ENSSMRG00000010623) #17	ENSSMRG00000010617	MRPL49 (ENSSMRG00000010615)	FAU (ENSSMRG00000010611)	ZNHIT2 (ENSSMRG00000010609)	TM7SF2 (ENSSMRG00000010607)	ENSSMRG00000010604	VPS51 (ENSSMRG00000010601)	ZFPL1 (ENSSMRG00000010600)
Toxicofera	ANCESTRAL SPECIES	28	ENSGT00390000018647	ENSGT00940000159785	ENSGT00940000157436	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000161064	ENSGT00940000158735	ENSGT00940000160644	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b #23	ENSGT00940000161002	ENSGT00530000063721.B
Elapidae	ANCESTRAL SPECIES	27	ENSGT00390000018647	ENSGT00940000159785	ENSGT00940000157436	ENSGT00390000013169	ENSGT00940000153370.a.a	ENSGT00940000161027	ENSGT00940000155293.b	ENSGT00940000161064	ENSGT00940000158735	ENSGT00940000160644	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b.o.b #23	ENSGT01090000260186	ENSGT00940000155978.b.o.a #23
Indian cobra	MODERN SPECIES	17	ENSNNAG00000007057	ENSNNAG00000007044	ENSNNAG00000007026	CCS (ENSNNAG00000007019)	RBM14 (ENSNNAG00000007002)	ZNRD2 (ENSNNAG00000006993)	FAM89B (ENSNNAG00000006980)	EHBP1L1 (ENSNNAG00000006957)	ENSNNAG00000006939	MAP3K11 (ENSNNAG00000006874)	PCNX3 (ENSNNAG00000006800)	MEN1 (ENSNNAG00000006738) #18	MAP4K2 (ENSNNAG00000006655) #19	SF1 (ENSNNAG00000006618) #20	PYGM (ENSNNAG00000005707) #21	RASGRP2 (ENSNNAG00000005565) #22	ENSNNAG00000005551 #23	ENSNNAG00000005517 #23	ENSNNAG00000005504	SSR2 (ENSNNAG00000005481)	ENSNNAG00000005464	CCT3 (ENSNNAG00000005361)	ENSNNAG00000005337	ENSNNAG00000005268	ZFPL1 (ENSNNAG00000005205)	VPS51 (ENSNNAG00000005175)	ENSNNAG00000005167	TM7SF2 (ENSNNAG00000005130)	ENSNNAG00000005116	MRPL49 (ENSNNAG00000005098)	ENSNNAG00000005048
Elapidae_a	ANCESTRAL SPECIES	146							ENSGT00940000161064	ENSGT00940000158735	ENSGT00940000160644	ENSGT00940000160285.i.b	ENSGT00940000160285.i.a	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b.o.b #23	ENSGT01090000260186	ENSGT00940000155978.b.o.a #23
Blue-lipped sea krait	MODERN SPECIES	6837											ENSLLTG00000011766	MEN1 (ENSLLTG00000011778) #18	MAP4K2 (ENSLLTG00000011801) #19	SF1 (ENSLLTG00000011864) #20	PYGM (ENSLLTG00000011880) #21	RASGRP2 (ENSLLTG00000011898) #22
Acanthophiinae	ANCESTRAL SPECIES	149								ENSGT00940000161064	ENSGT00940000158735	ENSGT00940000160644	ENSGT00940000160285.i.b	ENSGT00390000014237 #18	ENSGT00940000162250 #19	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT01090000260186	ENSGT00940000155978.b.o.a #23
Mainland tiger snake	MODERN SPECIES	273												MEN1 (ENSNSUG00000008360) #18	ENSNSUG00000008361 #19	SF1 (ENSNSUG00000008362) #20	PYGM (ENSNSUG00000008373) #21	ENSNSUG00000008374 #22	ENSNSUG00000008375 #23	ENSNSUG00000008376 #23	ENSNSUG00000008377	ENSNSUG00000008378	ENSNSUG00000008379 #23
Eastern brown snake	MODERN SPECIES	96	CDC42BPG (ENSPTXG00000015353) #17	SCYL1 (ENSPTXG00000015352)	ENSPTXG00000015344	ANKRD34A (ENSPTXG00000015342)	ENSPTXG00000015341	TXNIP (ENSPTXG00000015340)	ITLN1 (ENSPTXG00000015339)	MAP3K11 (ENSPTXG00000015336)	PCNX3 (ENSPTXG00000015297)	SIPA1 (ENSPTXG00000015294)	ENSPTXG00000015289	MEN1 (ENSPTXG00000015285) #18	MAP4K2 (ENSPTXG00000015284) #19	SF1 (ENSPTXG00000015149) #20	PYGM (ENSPTXG00000015001) #21	RASGRP2 (ENSPTXG00000014992) #22	ENSPTXG00000014991	ENSPTXG00000014990 #23
Lizard	MODERN SPECIES	2134															ENSACAG00000041001	ENSACAG00000042325 #22
Anura	ANCESTRAL SPECIES	223				ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00960000189653	ENSGT00950000182834.A.a.b.d	ENSGT00390000013169	ENSGT00940000161027	ENSGT00390000008727.b	ENSGT00940000160644	ENSGT00940000160285	ENSGT00390000014237 #18	ENSGT00940000157258 #20	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23	ENSGT00940000163749
Frog	MODERN SPECIES	4	pc.2 (ENSXETG00000008415)	lrfn4 (ENSXETG00000040727)	pacs1 (ENSXETG00000008416)	sf3b2 (ENSXETG00000008422)	cnih2 (ENSXETG00000008423)	znrd2 (ENSXETG00000045389)	ehbp1l1 (ENSXETG00000008426)	ENSXETG00000045210	sipa1 (ENSXETG00000034215)	ENSXETG00000043925	ENSXETG00000047422	ENSXETG00000043611	men1 (ENSXETG00000046773) #18	sf1 (ENSXETG00000008434) #20	pygb (ENSXETG00000034136) #21	rasgrp2 (ENSXETG00000040253) #22	nrxn2 (ENSXETG00000015575) #23	ENSXETG00000046060	ENSXETG00000047393	mpp1 (ENSXETG00000015590)	ctrb2 (ENSXETG00000026902)	ENSXETG00000042856	vrk3 (ENSXETG00000026901)	ripor1 (ENSXETG00000015614)	ctcf (ENSXETG00000015615)	CARMIL2 (ENSXETG00000044007)	enkd1 (ENSXETG00000015620)	gfod2 (ENSXETG00000015621)	nutf2 (ENSXETG00000026897)	thap11 (ENSXETG00000005807)	edc4 (ENSXETG00000005809)
Leishan spiny toad	MODERN SPECIES	1	SF3B2 (ENSLLEG00000021134)	ENSLLEG00000021089	ENSLLEG00000020999	ZNRD2 (ENSLLEG00000020920)	ENSLLEG00000020122	ENSLLEG00000020072	ENSLLEG00000020054	ENSLLEG00000020036	SIPA1 (ENSLLEG00000019883)	LTBP3 (ENSLLEG00000018146)	MEN1 (ENSLLEG00000018009) #18	ENSLLEG00000017980	ENSLLEG00000017821 #20	ENSLLEG00000017742	PYGM (ENSLLEG00000017302) #21	RASGRP2 (ENSLLEG00000016720) #22	ENSLLEG00000016655	NRXN2 (ENSLLEG00000015760) #23	ENSLLEG00000015585	ENSLLEG00000015231	MMP2 (ENSLLEG00000014792)	ENSLLEG00000014721	DDX28 (ENSLLEG00000014700)	ENSLLEG00000014232	PSKH1 (ENSLLEG00000014172)	ENSLLEG00000014148	ENSLLEG00000014094	ENSLLEG00000014072	EDC4 (ENSLLEG00000013380)	ENSLLEG00000013259	THAP11 (ENSLLEG00000013244)
Actinopterygii	ANCESTRAL SPECIES	427										ENSGT00940000159589	ENSGT01030000234573.B.c.b.b	ENSGT00940000166499	ENSGT00640000091486.a	ENSGT00940000171321	ENSGT00950000183148.b.a #21	ENSGT00940000160483 #22	ENSGT00940000155978.b #23
Reedfish	MODERN SPECIES		ENSECRG00000001641	ENSECRG00000001632	ENSECRG00000001623	cd248a (ENSECRG00000001618)	RCE1 (ENSECRG00000001605)	pmt (ENSECRG00000001525)	kat5b (ENSECRG00000001441)	rnaseh2c (ENSECRG00000001401)	ENSECRG00000001386	zdhhc24 (ENSECRG00000001369)	rbm4.3 (ENSECRG00000001356)	ENSECRG00000001333	ENSECRG00000001313	sf1 (ENSECRG00000001286) #20	pygmb (ENSECRG00000001247) #21	RASGRP2 (ENSECRG00000001118) #22	ENSECRG00000001078 #23	ENSECRG00000000978 #23	ENSECRG00000000880	nrxn2a (ENSECRG00000000834)	ENSECRG00000000815	MAP3K11 (ENSECRG00000000795)	PCNX3 (ENSECRG00000000755)	drap1 (ENSECRG00000000735)	zgc:63470 (ENSECRG00000000714)	rela (ENSECRG00000000703)	ENSECRG00000000616	ENSECRG00000000480	bbs1 (ENSECRG00000000457)	ENSECRG00000000448	ENSECRG00000000437
Neopterygii	ANCESTRAL SPECIES	318													ENSGT00940000165455	ENSGT00940000164485.a	ENSGT00940000157258 #20	ENSGT00940000160483 #22	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00940000158735	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	974																ENSGT00940000160483.k.a #22	ENSGT01090000260186
Clupeocephala	ANCESTRAL SPECIES	331					ENSGT00530000064262.qc	ENSGT00940000166356	ENSGT00940000165110.a	ENSGT00940000154108.a.d	ENSGT00940000157357.e.a	ENSGT00950000183162.a.a.c	ENSGT00940000158778.c	ENSGT00940000164430.a.a	ENSGT01080000257601	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23	ENSGT00940000158735	ENSGT00940000156392.b
Otomorpha	ANCESTRAL SPECIES	626															ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT01090000260186	ENSGT00940000155978.a.b ##23
Clupeiformes	ANCESTRAL SPECIES	115	ENSGT00940000165206.c	ENSGT00530000064262.pc.a	ENSGT00940000166356	ENSGT00940000165110.a	ENSGT00940000165110.b	ENSGT00940000153169.B	ENSGT00940000154445.b	ENSGT00940000154108.a.c	ENSGT00940000154108.a.d.e	ENSGT00940000157357.e.a	ENSGT00950000183162.a.a.c	ENSGT00940000158778.c	ENSGT01080000257601	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23	ENSGT00940000158735	ENSGT00940000156392.b	ENSGT00940000159147.b.a	ENSGT00390000005232	ENSGT00940000158605	ENSGT00950000182898.a.a.a.a.a.h
Denticle herring	MODERN SPECIES	16	hbegfb (ENSDCDG00000032141)	hnrnph1l (ENSDCDG00000032137)	BRD8 (ENSDCDG00000032122)	dnajc18 (ENSDCDG00000032112)	ppp3ca (ENSDCDG00000027958)	ube2d2 (ENSDCDG00000027667)	CXXC5 (ENSDCDG00000027660)	zgc:100829 (ENSDCDG00000027656)	puraa (ENSDCDG00000027654)	nrg2a (ENSDCDG00000027596)	ENSDCDG00000027589	otub1a (ENSDCDG00000027523)	ENSDCDG00000027519	slc22a6l (ENSDCDG00000027508)	pygma (ENSDCDG00000025810) #21	RASGRP2 (ENSDCDG00000025752) #22	ENSDCDG00000025747	NRXN2 (ENSDCDG00000021080) ##23	PCNX3 (ENSDCDG00000020831)	zgc:165604 (ENSDCDG00000020815)	pacs1a (ENSDCDG00000020795)	CAPN1 (ENSDCDG00000019473)	bbs1 (ENSDCDG00000019313)	cfbl (ENSDCDG00000019302)	slc29a2 (ENSDCDG00000019293)	ENSDCDG00000019286	ENSDCDG00000019283	ENSDCDG00000019281	ENSDCDG00000019277	ucp3 (ENSDCDG00000019271)	ucp2 (ENSDCDG00000019266)
Atlantic herring	MODERN SPECIES	24	trpc4a (ENSCHAG00000026728)	ufm1 (ENSCHAG00000026732)	frem2a (ENSCHAG00000026742)	ENSCHAG00000026753	ENSCHAG00000026755	dnajc18 (ENSCHAG00000026757)	ppp3ca (ENSCHAG00000026774)	ube2d2 (ENSCHAG00000026895)	CXXC5 (ENSCHAG00000026926)	zgc:100829 (ENSCHAG00000026929)	puraa (ENSCHAG00000026931)	nrg2a (ENSCHAG00000026933)	ENSCHAG00000026946	slc22a6l (ENSCHAG00000026948)	pygma (ENSCHAG00000026972) #21	RASGRP2 (ENSCHAG00000027041) #22	NRXN2 (ENSCHAG00000027059) ##23	ENSCHAG00000027172	ENSCHAG00000027183	znf346 (ENSCHAG00000027225)	fgfr4 (ENSCHAG00000027314)	rab24 (ENSCHAG00000000878)	snx12 (ENSCHAG00000000942)	SERPINF2 (ENSCHAG00000000992)	slc13a5a (ENSCHAG00000001061)	MED31 (ENSCHAG00000001214)	slc47a2.1 (ENSCHAG00000001304)	slc47a1 (ENSCHAG00000001782)	tmigd1 (ENSCHAG00000001911)	ENSCHAG00000001927	plrdgb (ENSCHAG00000001965)
Otophysi	ANCESTRAL SPECIES	500															ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23
Characiphysae	ANCESTRAL SPECIES	12	ENSGT00940000156901.A.c	ENSGT00940000165206.c	ENSGT00530000064262.pc.a	ENSGT00940000166356	ENSGT00940000165110.a	ENSGT00940000154108.a.d.e	ENSGT00940000157357.e.a	ENSGT00950000183162.a.a.c	ENSGT00940000158778.c	ENSGT00940000164430.a.a	ENSGT00390000006979.a	ENSGT00390000006255	ENSGT01080000257601	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23	ENSGT00940000158735	ENSGT00940000156392.b	ENSGT00940000159147.b.a	ENSGT00390000005232	ENSGT00940000158605	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000157436.b	ENSGT00940000165459.a.a.b	ENSGT00390000007335	ENSGT00940000168756	ENSGT00940000164878.b	ENSGT00940000166053	ENSGT00940000155031.a.b	ENSGT00940000164485.b
Channel catfish	MODERN SPECIES	9	hbegf (ENSIPUG00000024054)	hnrnph1l (ENSIPUG00000024047)	DNAJC18 (ENSIPUG00000024039)	ENSIPUG00000023498	ppp3ca (ENSIPUG00000023459)	cxxc5 (ENSIPUG00000023455)	zgc:100829 (ENSIPUG00000023435)	puraa (ENSIPUG00000023429)	nrg2 (ENSIPUG00000023409)	ENSIPUG00000021751	otub1a (ENSIPUG00000021718)	ENSIPUG00000021708	rbx1 (ENSIPUG00000021696)	slc22a6l (ENSIPUG00000021676)	pygma (ENSIPUG00000021648) #21	RASGRP2 (ENSIPUG00000021597) #22	NRXN2 (ENSIPUG00000021541) ##23	PCNX3 (ENSIPUG00000021514)	zgc:165604 (ENSIPUG00000021501)	pacs1a (ENSIPUG00000021424)	CAPN1 (ENSIPUG00000021372)	BBS1 (ENSIPUG00000021339)	cfbl (ENSIPUG00000021284)	slc29a2 (ENSIPUG00000021262)	rbm14a (ENSIPUG00000021256)	ENSIPUG00000021244	ENSIPUG00000021234	dpp3 (ENSIPUG00000021182)	hif1al2 (ENSIPUG00000021158)	sart1 (ENSIPUG00000021117)	ENSIPUG00000021112
Characiphysae_b	ANCESTRAL SPECIES	6	ENSGT00940000156901.A.c	ENSGT00940000165206.c	ENSGT00530000064262.pc.a	ENSGT00940000166356	ENSGT00940000165110.a	ENSGT00940000154108.a.d.e	ENSGT00940000157357.e.a	ENSGT00950000183162.a.a.c	ENSGT00940000158778.c	ENSGT00940000164430.a.a	ENSGT00390000006979.a	ENSGT00390000006255	ENSGT01080000257601	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23	ENSGT00940000158735	ENSGT00940000156392.b	ENSGT00940000159147.b.a	ENSGT00390000005232	ENSGT00940000158605	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000157436.b	ENSGT00940000165459.a.a.b	ENSGT00390000007335	ENSGT00390000007071	ENSGT00940000164878.b	ENSGT00940000166053	ENSGT00940000155031.a.b	ENSGT00940000164485.b
Characoidei	ANCESTRAL SPECIES	27	ENSGT00940000156901.A.c	ENSGT00940000165206.c	ENSGT00530000064262.pc.a	ENSGT00940000166356	ENSGT00940000165110.a	ENSGT00940000154108.a.d.e	ENSGT00940000157357.e.a	ENSGT00950000183162.a.a.c	ENSGT00940000158778.c	ENSGT00940000164430.a.a	ENSGT00390000006979.a	ENSGT00390000006255	ENSGT01080000257601	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23	ENSGT01090000260186	ENSGT00940000163749.a.b	ENSGT00940000158735	ENSGT00940000156392.b	ENSGT00940000159147.b.a	ENSGT00390000005232	ENSGT00940000158605	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000157436.b	ENSGT00940000165459.a.a.b	ENSGT00390000007335	ENSGT00940000168756	ENSGT00940000164878.b	ENSGT00940000166053
Red-bellied piranha	MODERN SPECIES	57	hbegfb (ENSPNAG00000002795)	hnrnph1l (ENSPNAG00000002784)	ENSPNAG00000002777	dnajc18 (ENSPNAG00000002764)	ppp3ca (ENSPNAG00000013454)	ENSPNAG00000013356	CXXC5 (ENSPNAG00000013332)	zgc:100829 (ENSPNAG00000013316)	puraa (ENSPNAG00000013278)	nrg2a (ENSPNAG00000013267)	ENSPNAG00000002655	otub1a (ENSPNAG00000002646)	ENSPNAG00000002633	slc22a6l (ENSPNAG00000013213)	pygma (ENSPNAG00000013175) #21	RASGRP2 (ENSPNAG00000013105) #22	NRXN2 (ENSPNAG00000013065) ##23	ENSPNAG00000012925	PCNX3 (ENSPNAG00000002454)	zgc:165604 (ENSPNAG00000012888)	pacs1a (ENSPNAG00000012867)	CAPN1 (ENSPNAG00000012722)	bbs1 (ENSPNAG00000012672)	ENSPNAG00000002312	ENSPNAG00000012571	slc29a2 (ENSPNAG00000012549)	actn3a (ENSPNAG00000012529)	rbm14a (ENSPNAG00000012473)	ENSPNAG00000002262	ENSPNAG00000012446	dpp3 (ENSPNAG00000012426)
Mexicana tetra	MODERN SPECIES	5	hbegfb (ENSAMXG00000005722)	hnrnph1l (ENSAMXG00000030703)	ENSAMXG00000005696	dnajc18 (ENSAMXG00000033735)	ppp3ca (ENSAMXG00000038129)	ENSAMXG00000029447	CXXC5 (ENSAMXG00000005579)	zgc:100829 (ENSAMXG00000043275)	ENSAMXG00000033549	puraa (ENSAMXG00000025364)	nrg2a (ENSAMXG00000020262)	ENSAMXG00000029656	otub1a (ENSAMXG00000020226)	cox8a (ENSAMXG00000034171)	slc22a6l (ENSAMXG00000020208)	RASGRP2 (ENSAMXG00000020174) #22	pygma (ENSAMXG00000020186) #21	ENSAMXG00000040053	ENSAMXG00000034314 ##23	ENSAMXG00000035463	ENSAMXG00000035665	NRXN2 (ENSAMXG00000020839) ##23	ENSAMXG00000034129	nrxn2a (ENSAMXG00000037597)	PCNX3 (ENSAMXG00000020129)	zgc:165604 (ENSAMXG00000020106)	pacs1a (ENSAMXG00000020099)	CAPN1 (ENSAMXG00000020094)	bbs1 (ENSAMXG00000020073)	zgc:162239 (ENSAMXG00000031256)	septin4a (ENSAMXG00000020058)
Electric eel	MODERN SPECIES	428	ccnjl (ENSEEEG00000020693)	slc23a1 (ENSEEEG00000020718)	pfdn1 (ENSEEEG00000021271)	hbegfb (ENSEEEG00000021276)	hnrnph1l (ENSEEEG00000021278)	ENSEEEG00000021282	dnajc18 (ENSEEEG00000021293)	ppp3ca (ENSEEEG00000021304)	zgc:100829 (ENSEEEG00000021352)	puraa (ENSEEEG00000021354)	nrg2a (ENSEEEG00000021357)	ENSEEEG00000021360	otub1a (ENSEEEG00000021380)	slc22a6l (ENSEEEG00000021393)	pygma (ENSEEEG00000021455) #21	ENSEEEG00000021657 #22
Cyprinoidei	ANCESTRAL SPECIES	326															ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	387																ENSGT00940000160483.k.a.a #22	ENSGT00940000155978.a.b.c.a.a ##23	ENSGT00940000158735.a	ENSGT00940000156392.b	ENSGT00950000183209.a.j.g.b	ENSGT00940000159147.b.a.a	ENSGT00390000005232.r	ENSGT00940000158605.k.b	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000153968.a.b.b.b.i.b	ENSGT00940000157436.b.c.a	ENSGT00940000165459.a.a.b.b	ENSGT00390000007335.g	ENSGT00940000156774.hb.b	ENSGT00390000007071.k	ENSGT00940000164878.b.b
Goldfish	MODERN SPECIES	13	ccnjl (ENSCARG00000014427)	slc23a1 (ENSCARG00000014471)	pfdn1 (ENSCARG00000015242)	hbegfb (ENSCARG00000015251)	hnrnph1l (ENSCARG00000015261)	dnajc18 (ENSCARG00000015276)	ppp3ca (ENSCARG00000015380)	CXXC5 (ENSCARG00000018057)	zgc:100829 (ENSCARG00000018062)	puraa (ENSCARG00000018075)	nrg2a (ENSCARG00000018092)	ENSCARG00000018288	otub1a (ENSCARG00000018294)	cox8a (ENSCARG00000018321)	slc22a6l (ENSCARG00000018325)	RASGRP2 (ENSCARG00000018343) #22	NRXN2 (ENSCARG00000018498) ##23	PCNX3 (ENSCARG00000021087)	zgc:165604 (ENSCARG00000021236)	pacs1a (ENSCARG00000021255)	CAPN1 (ENSCARG00000021333)	bbs1 (ENSCARG00000021472)	cfbl (ENSCARG00000022184)	slc29a2 (ENSCARG00000023488)	actn3a (ENSCARG00000023606)	rbm14a (ENSCARG00000023706)	ENSCARG00000023727	dpp3 (ENSCARG00000023765)	hif1al2 (ENSCARG00000024005)	sart1 (ENSCARG00000024039)	ENSCARG00000024102
Cyprininae_a	ANCESTRAL SPECIES	33																ENSGT00940000160483.k.a.a #22	ENSGT00940000155978.a.b.c.a.a ##23	ENSGT00940000158735.a	ENSGT00940000156392.b	ENSGT00950000183209.a.j.g.b	ENSGT00940000159147.b.a.a	ENSGT00390000005232.r	ENSGT00940000158605.k.a.a	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000153968.a.b.b.b.i.b	ENSGT00940000157436.b.c.a	ENSGT00940000165459.a.a.b.b	ENSGT00390000007335.g	ENSGT00940000156774.hb.b	ENSGT00390000007071.k	ENSGT00940000164878.b.a
Golden-line barbel	MODERN SPECIES	736									ENSSGRG00000036048	nrg2a (ENSSGRG00000036050)	ENSSGRG00000036057	otub1a (ENSSGRG00000036059)	cox8a (ENSSGRG00000036084)	slc22a6l (ENSSGRG00000036085)	pygma (ENSSGRG00000036109) #21	ENSSGRG00000036848 #22	ENSSGRG00000036860 ##23	PCNX3 (ENSSGRG00000037215)	zgc:165604 (ENSSGRG00000037216)	pacs1a (ENSSGRG00000037217)	CAPN1 (ENSSGRG00000037319)
Common carp reference	MODERN SPECIES	45	hnrnph1l (ENSCCRG00000055945)	ENSCCRG00000006969	ENSCCRG00000060132	ENSCCRG00000062009	ppp3ca (ENSCCRG00000045206)	zgc:100829 (ENSCCRG00000074805)	puraa (ENSCCRG00000052971)	ENSCCRG00000057868	ENSCCRG00000067626	nrg2a (ENSCCRG00000070403)	ENSCCRG00000058143	otub1a (ENSCCRG00000028976)	cox8a (ENSCCRG00000028969)	slc22a6l (ENSCCRG00000028957)	ENSCCRG00000068374	ENSCCRG00000039456 #22	ENSCCRG00000046431	ENSCCRG00000059802 ##23	zgc:165604 (ENSCCRG00000048490)	ENSCCRG00000048532	pacs1a (ENSCCRG00000039971)	ENSCCRG00000027296	bbs1 (ENSCCRG00000007509)	slc29a2 (ENSCCRG00000010097)	cfbl (ENSCCRG00000007407)	actn3a (ENSCCRG00000010221)	rbm14a (ENSCCRG00000058774)	ENSCCRG00000010474	dpp3 (ENSCCRG00000010502)	hif1al2 (ENSCCRG00000076777)	ENSCCRG00000012120
Cyprininae	ANCESTRAL SPECIES	469	ENSGT00940000156901.A.c.a.a.a	ENSGT00940000165206.c.c	ENSGT00940000166356.c	ENSGT00940000165110.a.a	ENSGT00940000154108.a.d.e.a	ENSGT00940000157357.e.a.a	ENSGT00950000183162.a.a.c.b	ENSGT00940000158778.c.b	ENSGT00940000164430.a.a.c	ENSGT00390000006979.a.o.a	ENSGT00390000006255.c.a	ENSGT00940000154901.C.b.h	ENSGT00390000006255.c.b	ENSGT00940000154901.C.b.g	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a.b #22	ENSGT00940000155978.a.b.d ##23	ENSGT00940000158735.b	ENSGT00950000183209.a.j.g.a	ENSGT00940000159147.b.a.b	ENSGT00390000005232.q	ENSGT00940000158605.k.a.b	ENSGT00940000158605.l.a.a
Goldfish	MODERN SPECIES	40	hbegfb (ENSCARG00000063991)	hnrnph1l (ENSCARG00000064002)	BRD8 (ENSCARG00000064129)	dnajc18 (ENSCARG00000064699)	ppp3ca (ENSCARG00000064795)	ENSCARG00000065381	CXXC5 (ENSCARG00000065388)	zgc:100829 (ENSCARG00000065395)	nrg2a (ENSCARG00000065411)	puraa (ENSCARG00000065545)	ENSCARG00000065549	otub1a (ENSCARG00000065553)	cox8a (ENSCARG00000065582)	slc22a6l (ENSCARG00000065590)	pygma (ENSCARG00000065756) #21	RASGRP2 (ENSCARG00000067249) #22	ENSCARG00000067271	NRXN2 (ENSCARG00000067363) ##23	PCNX3 (ENSCARG00000067908)	ENSCARG00000068905	pacs1a (ENSCARG00000068918)	bbs1 (ENSCARG00000068935)	ENSCARG00000068946	cfbl (ENSCARG00000068956)	ENSCARG00000068976	ENSCARG00000069011	dync2i2 (ENSCARG00000069019)	setb (ENSCARG00000069042)	SPECC1L (ENSCARG00000069095)	ENSCARG00000069206	unc5da (ENSCARG00000069248)
Cyprininae_a	ANCESTRAL SPECIES	410		ENSGT00940000165206.c.c	ENSGT00940000166356.c	ENSGT00940000165110.a.a	ENSGT00940000154108.a.d.e.a	ENSGT00940000157357.e.a.a	ENSGT00950000183162.a.a.c.b	ENSGT00940000158778.c.b	ENSGT00940000164430.a.a.c	ENSGT00390000006979.a.o.a	ENSGT00390000006255.c.a	ENSGT00940000154901.C.b.h	ENSGT00390000006255.c.b	ENSGT00940000154901.C.b.g	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a.b #22	ENSGT00940000155978.a.b.d ##23	ENSGT00940000158735.b	ENSGT00950000183209.a.j.g.a	ENSGT00940000159147.b.a.b	ENSGT00390000005232.q	ENSGT00940000158605.k.a.b	ENSGT00940000158605.l.a.a
Common carp reference	MODERN SPECIES	38	ccnjl (ENSCCRG00000078212)	slc23a1 (ENSCCRG00000018803)	pfdn1 (ENSCCRG00000018839)	hbegfb (ENSCCRG00000063068)	hnrnph1l (ENSCCRG00000003317)	ENSCCRG00000003384	dnajc18 (ENSCCRG00000003827)	ppp3ca (ENSCCRG00000062027)	zgc:100829 (ENSCCRG00000045032)	puraa (ENSCCRG00000069137)	nrg2a (ENSCCRG00000060948)	ENSCCRG00000014878	otub1a (ENSCCRG00000014902)	slc22a6l (ENSCCRG00000014998)	pygma (ENSCCRG00000046978) #21	ENSCCRG00000055308 #22	ENSCCRG00000061299 ##23	ENSCCRG00000042237	pacs1a (ENSCCRG00000080072)	ENSCCRG00000009123	bbs1 (ENSCCRG00000027323)	cfbl (ENSCCRG00000007465)	ENSCCRG00000016320	ENSCCRG00000010112	actn3a (ENSCCRG00000012217)	rbm14a (ENSCCRG00000010472)	ENSCCRG00000072703	dpp3 (ENSCCRG00000017853)	hif1al2 (ENSCCRG00000012066)	sart1 (ENSCCRG00000048957)	ENSCCRG00000048954
Golden-line barbel	MODERN SPECIES	587	fabp6 (ENSSGRG00000014469)	ccnjl (ENSSGRG00000014468)	slc23a1 (ENSSGRG00000014467)	hbegfb (ENSSGRG00000014466)	hnrnph1l (ENSSGRG00000014464)	ppp3ca (ENSSGRG00000014198)	CXXC5 (ENSSGRG00000014197)	zgc:100829 (ENSSGRG00000014196)	puraa (ENSSGRG00000014195)	nrg2a (ENSSGRG00000014068)	ENSSGRG00000014061	otub1a (ENSSGRG00000014060)	cox8a (ENSSGRG00000014059)	slc22a6l (ENSSGRG00000014056)	pygma (ENSSGRG00000006358) #21	RASGRP2 (ENSSGRG00000006123) #22	ENSSGRG00000006120	ENSSGRG00000005785 ##23
Zebrafish	MODERN SPECIES	13	ENSDARG00000091692	havcr1 (ENSDARG00000040178)	timd4 (ENSDARG00000077257)	ENSDARG00000087457	ppp3ca (ENSDARG00000004988)	CXXC5 (ENSDARG00000078865)	zgc:100829 (ENSDARG00000015557)	puraa (ENSDARG00000067591)	nrg2a (ENSDARG00000077818)	ENSDARG00000117105	ENSDARG00000055539	otub1a (ENSDARG00000055536)	cox8a (ENSDARG00000095273)	slc22a6l (ENSDARG00000055523)	pygma (ENSDARG00000055518) #21	RASGRP2 (ENSDARG00000062328) #22	nrxn2a (ENSDARG00000061454)	pcnx3 (ENSDARG00000019501)	zgc:165604 (ENSDARG00000021241)	pacs1a (ENSDARG00000044556)	CAPN1 (ENSDARG00000055338)	bbs1 (ENSDARG00000075169)	cfbl (ENSDARG00000090730)	bfb (ENSDARG00000005616)	cfb (ENSDARG00000055278)	slc29a2 (ENSDARG00000001767)	actn3a (ENSDARG00000013755)	rbm14a (ENSDARG00000012723)	ENSDARG00000079095	dpp3 (ENSDARG00000020676)	hif1al2 (ENSDARG00000044550)
Euteleosteomorpha	ANCESTRAL SPECIES	278					ENSGT00530000064262.qc	ENSGT00940000166356	ENSGT00940000165110.a	ENSGT00940000154108.a.d	ENSGT00940000157357.e.a	ENSGT00950000183162.a.a.c	ENSGT00940000158778.c	ENSGT00940000164430.a.a	ENSGT01080000257601	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23	ENSGT00940000158735	ENSGT00940000156392.b
Protacanthopterygii	ANCESTRAL SPECIES	83	ENSGT00940000165282.b	ENSGT00950000182950.A	ENSGT00940000156931	ENSGT00530000064262.pc.a	ENSGT00940000166356	ENSGT00940000165110.a	ENSGT00940000154108.a.d	ENSGT00940000157357.e.a	ENSGT00950000183162.a.a.c.c	ENSGT00950000183162.a.a.c.d	ENSGT00940000158778.c	ENSGT00940000164430.a.a	ENSGT01080000257601	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000160483.k.a #22	ENSGT00940000155978.a.b ##23	ENSGT00940000158735	ENSGT00940000156392.b	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000158605.s	ENSGT00390000005232	ENSGT00940000159147.b.a	ENSGT00940000153968.a.b.b.b.p	ENSGT00940000157436.b	ENSGT00940000165459.a.a.b	ENSGT00390000007335	ENSGT00940000156996.f.a.a	ENSGT00940000155078.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	156	ENSGT00940000165282.b.b	ENSGT00950000182950.A.h	ENSGT00940000156931.e	ENSGT00530000064262.pc.a.t	ENSGT00940000166356.b	ENSGT00940000165110.a.e	ENSGT00940000153169.B.n.b	ENSGT00940000154108.a.d.d	ENSGT00940000157357.e.a.c	ENSGT00950000183162.a.a.c.c	ENSGT00940000158778.c.d	ENSGT00940000164430.a.a	ENSGT01080000257601.a	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b.d #21	ENSGT00940000160483.k.a.c #22	ENSGT00940000155978.a.b.b.b ##23	ENSGT00940000158735.d	ENSGT00990000212328	ENSGT00950000182898.a.a.a.a.a.h.b	ENSGT00940000158605.s.b	ENSGT00390000005232	ENSGT00940000159147.b.a	ENSGT00950000183209.a.a.b.c.b
Salmoninae_a	ANCESTRAL SPECIES	12	ENSGT00940000165282.b.b	ENSGT00950000182950.A.h	ENSGT00940000156931.e	ENSGT00530000064262.pc.a.t	ENSGT00940000166356.b	ENSGT00940000165110.a.e.b	ENSGT00940000153169.B.n.b	ENSGT00940000154108.a.d.d	ENSGT00940000157357.e.a.c	ENSGT00950000183162.a.a.c.c	ENSGT00940000158778.c.d	ENSGT00940000164430.a.a	ENSGT01080000257601.a	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b.d #21	ENSGT00940000160483.k.a.c #22	ENSGT00940000155978.a.b.b.b ##23	ENSGT00940000158735.d	ENSGT00950000182898.a.a.a.a.a.h.b	ENSGT00940000158605.s.b	ENSGT00390000005232	ENSGT00940000159147.b.a	ENSGT00950000183209.a.a.b.c.b	ENSGT00940000157436.b.b	ENSGT00940000165459.a.a.b.d	ENSGT00390000007335.d	ENSGT00940000164309.t	ENSGT00940000153460.c.b.c.b	ENSGT00940000154833.a.g.b	ENSGT00940000156341.e.a	ENSGT01100000263502.A.a.a.a.a.b.f
Oncorhynchus	ANCESTRAL SPECIES	18	ENSGT00940000165282.b.b	ENSGT00950000182950.A.h	ENSGT00940000156931.e	ENSGT00530000064262.pc.a.t	ENSGT00940000166356.b	ENSGT00940000165110.a.e.b	ENSGT00940000153169.B.n.b	ENSGT00940000154108.a.d.d	ENSGT00940000157357.e.a.c	ENSGT00950000183162.a.a.c.c	ENSGT00940000158778.c.d	ENSGT00940000164430.a.a	ENSGT01080000257601.a	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b.d #21	ENSGT00940000160483.k.a.c #22	ENSGT00940000155978.a.b.b.b ##23	ENSGT00940000158735.d	ENSGT00950000182898.a.a.a.a.a.h.b	ENSGT00940000158605.s.b	ENSGT00390000005232	ENSGT00940000159147.b.a	ENSGT00950000183209.a.a.b.c.b	ENSGT00940000157436.b.b	ENSGT00940000165459.a.a.b.d	ENSGT00390000007335.d	ENSGT00940000164309.t	ENSGT00940000153460.c.b.c.b	ENSGT00940000154833.a.g.b	ENSGT00940000156341.e.a	ENSGT01100000263502.A.a.a.a.a.b.f
Oncorhynchus_a	ANCESTRAL SPECIES	20	ENSGT00940000161460	ENSGT00940000165282.b.b	ENSGT00950000182950.A.h	ENSGT00940000156931.e	ENSGT00530000064262.pc.a.t	ENSGT00940000166356.b	ENSGT00940000165110.a.e.b	ENSGT00940000153169.B.n.b	ENSGT00940000154108.a.d.d	ENSGT00940000157357.e.a.c	ENSGT00950000183162.a.a.c.c	ENSGT00940000158778.c.d	ENSGT00940000164430.a.a	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b.d #21	ENSGT00940000160483.k.a.c #22	ENSGT00940000155978.a.b.b.b ##23	ENSGT00940000158735.d	ENSGT00950000182898.a.a.a.a.a.h.b	ENSGT00940000158605.s.b	ENSGT00390000005232	ENSGT00940000159147.b.a	ENSGT00950000183209.a.a.b.c.b	ENSGT00940000157436.b.b	ENSGT00940000165459.a.a.b.d	ENSGT00390000007335.d	ENSGT00940000164309.t	ENSGT00940000153460.c.b.c.b	ENSGT00940000154833.a.g.b	ENSGT00940000156341.e.a	ENSGT01100000263502.A.a.a.a.a.b.f
Coho salmon	MODERN SPECIES	21	CDC25C (ENSOKIG00005049286)	ENSOKIG00005049280	cdc23 (ENSOKIG00005049176)	KIF20A (ENSOKIG00005049127)	BRD8 (ENSOKIG00005049118)	ENSOKIG00005049106	ppp3ca (ENSOKIG00005049054)	ENSOKIG00005048862	CXXC5 (ENSOKIG00005048832)	zgc:100829 (ENSOKIG00005048828)	puraa (ENSOKIG00005048823)	nrg2a (ENSOKIG00005048772)	ENSOKIG00005048752	slc22a6l (ENSOKIG00005048627)	pygma (ENSOKIG00005048500) #21	RASGRP2 (ENSOKIG00005048409) #22	ENSOKIG00005048398	NRXN2 (ENSOKIG00005048164) ##23	PCNX3 (ENSOKIG00005046991)	slc29a2 (ENSOKIG00005046909)	ENSOKIG00005046878	bbs1 (ENSOKIG00005046532)	ENSOKIG00005045331	pacs1a (ENSOKIG00005044587)	rbm14a (ENSOKIG00005044504)	ENSOKIG00005044408	dpp3 (ENSOKIG00005044072)	ENSOKIG00005044015	slc9a6b (ENSOKIG00005042626)	fhl1b (ENSOKIG00005042229)	ENSOKIG00005042208
Chinook salmon	MODERN SPECIES	26	ENSOTSG00005037284	wdr55 (ENSOTSG00005037283)	ugdh (ENSOTSG00005037248)	ENSOTSG00005037247	CDC25C (ENSOTSG00005037245)	ENSOTSG00005037244	cdc23 (ENSOTSG00005037233)	kif20a (ENSOTSG00005037229)	BRD8 (ENSOTSG00005037226)	dnajc18 (ENSOTSG00005037222)	ENSOTSG00005037220	nrg2a (ENSOTSG00005037159)	ENSOTSG00005037158	slc22a6l (ENSOTSG00005037152)	pygma (ENSOTSG00005036973) #21	RASGRP2 (ENSOTSG00005036924) #22	NRXN2 (ENSOTSG00005036454) ##23	ENSOTSG00005029677	ENSOTSG00005029671	bbs1 (ENSOTSG00005028335)	CAPN1 (ENSOTSG00005013242)	rbm14a (ENSOTSG00005013175)	ENSOTSG00005013172	dpp3 (ENSOTSG00005011481)	il2rga (ENSOTSG00005011474)	slc9a6b (ENSOTSG00005010740)	fhl1b (ENSOTSG00005010739)	ENSOTSG00005010737	tmtops3b (ENSOTSG00005010736)	ENSOTSG00005010735	fgf13b (ENSOTSG00005010734)
Rainbow trout	MODERN SPECIES	364	ENSOMYG00000023723	ppp3ca (ENSOMYG00000023759)	ENSOMYG00000067480	ENSOMYG00000070735	ENSOMYG00000023934	ENSOMYG00000052381	puraa (ENSOMYG00000077241)	nrg2a (ENSOMYG00000025227)	ENSOMYG00000050364	ENSOMYG00000063212	ENSOMYG00000025820	ENSOMYG00000053845	slc22a6l (ENSOMYG00000025891)	pygma (ENSOMYG00000026264) #21	ENSOMYG00000059402	ENSOMYG00000028008 #22	ENSOMYG00000028233 ##23	ENSOMYG00000028756	cfbl (ENSOMYG00000029511)	bbs1 (ENSOMYG00000029975)	ENSOMYG00000032016	pacs1a (ENSOMYG00000040229)	rbm14a (ENSOMYG00000040313)	ENSOMYG00000040326	dpp3 (ENSOMYG00000040545)	slc9a6b (ENSOMYG00000041463)	il2rc2 (ENSOMYG00000041376)	fhl1b (ENSOMYG00000041803)	ENSOMYG00000041811	tmtops3b (ENSOMYG00000041819)	ENSOMYG00000041821
Salmo	ANCESTRAL SPECIES	1	ENSGT00940000156931.e	ENSGT00530000064262.pc.a.t	ENSGT00940000166356.b	ENSGT00940000165110.a.e.a	ENSGT00940000165110.a.e.b	ENSGT00940000153169.B.n.b	ENSGT00940000154108.a.d.d	ENSGT01100000266631	ENSGT00940000157357.e.a.c	ENSGT00950000183162.a.a.c.c	ENSGT00940000158778.c.d	ENSGT00940000164430.a.a	ENSGT01080000257601.a	ENSGT00940000154901.C.b	ENSGT00950000183148.b.a.g.b.d #21	ENSGT00940000160483.k.a.c #22	ENSGT00940000155978.a.b.b.b ##23	ENSGT00940000158735.d	ENSGT00940000158605.s.b	ENSGT00390000005232	ENSGT00940000159147.b.a	ENSGT00950000183209.a.a.b.c.b	ENSGT00940000157436.b.b	ENSGT00940000165459.a.a.b.d	ENSGT00390000007335.d	ENSGT00940000164309.t	ENSGT00940000153460.c.b.c.b	ENSGT00940000154833.a.g.a	ENSGT01100000263502.A.a.a.a.a.b.f	ENSGT00940000162313.b.d	ENSGT00950000182887.C.b.b.a.e
River trout	MODERN SPECIES	3	kif20a (ENSSTUG00000048645)	BRD8 (ENSSTUG00000048659)	dnajc18 (ENSSTUG00000048690)	ENSSTUG00000048707	ppp3ca (ENSSTUG00000048713)	ENSSTUG00000048861	CXXC5 (ENSSTUG00000048873)	ENSSTUG00000048875	ENSSTUG00000048879	puraa (ENSSTUG00000048881)	nrg2a (ENSSTUG00000048890)	ENSSTUG00000049030	ENSSTUG00000049032	slc22a6l (ENSSTUG00000049039)	pygma (ENSSTUG00000049086) #21	RASGRP2 (ENSSTUG00000049179) #22	NRXN2 (ENSSTUG00000001252) ##23	PCNX3 (ENSSTUG00000002619)	ENSSTUG00000004835	ENSSTUG00000004841	ENSSTUG00000004863	bbs1 (ENSSTUG00000005212)	CAPN1 (ENSSTUG00000007130)	pacs1a (ENSSTUG00000011109)	ENSSTUG00000011360	rbm14a (ENSSTUG00000011379)	ENSSTUG00000011463	dpp3 (ENSSTUG00000011636)	il2rga (ENSSTUG00000012904)	slc9a6b (ENSSTUG00000013042)	fhl1b (ENSSTUG00000013919)
Atlantic salmon	MODERN SPECIES	2	CDC25C (ENSSSAG00000006736)	ENSSSAG00000006766	cdc23 (ENSSSAG00000006796)	kif20a (ENSSSAG00000007082)	BRD8 (ENSSSAG00000007120)	djc18 (ENSSSAG00000007138)	ppp3ca (ENSSSAG00000045428)	UB2D2 (ENSSSAG00000108861)	ENSSSAG00000093928	ENSSSAG00000009630	puraa (ENSSSAG00000116216)	nrg2a (ENSSSAG00000009743)	ENSSSAG00000010021	slc22a6l (ENSSSAG00000010033)	pygma (ENSSSAG00000010242) #21	rasgrp2 (ENSSSAG00000042038) #22	ENSSSAG00000042162 ##23	ENSSSAG00000062791	ENSSSAG00000121391	bbs1 (ENSSSAG00000061521)	ENSSSAG00000053959	pacs1a (ENSSSAG00000053509)	rbm14a (ENSSSAG00000053395)	ENSSSAG00000053299	dpp3 (ENSSSAG00000051920)	ENSSSAG00000042506	ENSSSAG00000051839	ENSSSAG00000062990	ENSSSAG00000062995	ENSSSAG00000063004	arr3a (ENSSSAG00000063188)
Huchen	MODERN SPECIES	2489										nrg2a (ENSHHUG00000035359)	ENSHHUG00000035364	ENSHHUG00000035365	slc22a6l (ENSHHUG00000035367)	ENSHHUG00000035442	pygma (ENSHHUG00000035446) #21	RASGRP2 (ENSHHUG00000035678) #22	ENSHHUG00000035694 ##23
Salmoninae	ANCESTRAL SPECIES	689									ENSGT00940000153169.B.n.a	ENSGT00940000154108.a.d.c	ENSGT00940000157357.e.a.d	ENSGT00950000183162.a.a.c.d	ENSGT00940000158778.c.c	ENSGT01080000257601.b	ENSGT00950000183148.b.a.g.b.c #21	ENSGT00940000160483.k.a.d #22	ENSGT00940000155978.a.b.b.a ##23	ENSGT00940000158735.c	ENSGT00940000156392.b	ENSGT00950000182898.a.a.a.a.a.h.a	ENSGT00940000158605.s.a
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00390000015355.`b.a	ENSGT00940000165282.b.a	ENSGT00950000182950.A.g	ENSGT00940000156931.f	ENSGT00530000064262.pc.a.s	ENSGT00940000166356.a	ENSGT00940000165110.a.f	ENSGT00940000153169.B.n.a	ENSGT00940000154108.a.d.c	ENSGT00940000157357.e.a.d	ENSGT01000000219823	ENSGT00950000183162.a.a.c.d	ENSGT00940000158778.c.c	ENSGT01080000257601.b	ENSGT00950000183148.b.a.g.b.c #21	ENSGT00940000160483.k.a.d #22	ENSGT00940000155978.a.b.b.a ##23	ENSGT00940000158735.c	ENSGT00940000156392.b	ENSGT00940000174752	ENSGT00950000182898.a.a.a.a.a.h.a	ENSGT00940000158605.s.a	ENSGT00950000183209.a.a.b.c.a	ENSGT00940000153968.a.b.b.b.p	ENSGT00940000157436.b.a	ENSGT00940000165459.a.a.b.c	ENSGT00390000007335.c	ENSGT00940000156996.f.a.a.c	ENSGT00940000155078.b	ENSGT00940000161027.a.a	ENSGT00940000153370.a.a.e
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00390000015355.`b.a	ENSGT00940000165282.b.a	ENSGT00950000182950.A.g	ENSGT00940000156931.f	ENSGT00530000064262.pc.a.s	ENSGT00940000166356.a	ENSGT00940000165110.a.f	ENSGT00940000153169.B.n.a	ENSGT00940000154108.a.d.c	ENSGT00940000157357.e.a.d	ENSGT01000000219823	ENSGT00950000183162.a.a.c.d	ENSGT00940000158778.c.c	ENSGT01080000257601.b	ENSGT00950000183148.b.a.g.b.c #21	ENSGT00940000160483.k.a.d #22	ENSGT00940000155978.a.b.b.a ##23	ENSGT00940000158735.c	ENSGT00940000156392.b	ENSGT00940000174752	ENSGT00950000182898.a.a.a.a.a.h.a	ENSGT00940000158605.s.a	ENSGT00950000183209.a.a.b.c.a	ENSGT00940000153968.a.b.b.b.p	ENSGT00940000157436.b.a	ENSGT00940000165459.a.a.b.c	ENSGT00390000007335.c	ENSGT00940000156996.f.a.a.c	ENSGT00940000155078.b	ENSGT00940000161027.a.a	ENSGT00940000153370.a.a.e
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00940000154622.a.b.q.b	ENSGT00390000015355.`b.a	ENSGT00940000165282.b.a	ENSGT00950000182950.A.g	ENSGT00940000156931.f	ENSGT00530000064262.pc.a.s	ENSGT00940000166356.a	ENSGT00940000165110.a.f	ENSGT00940000153169.B.n.a	ENSGT00940000154108.a.d.c	ENSGT00940000157357.e.a.d	ENSGT00950000183162.a.a.c.d	ENSGT00940000158778.c.c	ENSGT01080000257601.b	ENSGT00950000183148.b.a.g.b.c #21	ENSGT00940000160483.k.a.d #22	ENSGT00940000155978.a.b.b.a ##23	ENSGT00940000158735.c	ENSGT00940000156392.b	ENSGT00940000174752	ENSGT00950000182898.a.a.a.a.a.h.a	ENSGT00940000158605.s.a	ENSGT00950000183209.a.a.b.c.a	ENSGT00940000153968.a.b.b.b.p	ENSGT00940000157436.b.a	ENSGT00940000165459.a.a.b.c	ENSGT00390000007335.c	ENSGT00940000156996.f.a.a.c	ENSGT00940000155078.b	ENSGT00940000161027.a.a	ENSGT00940000153370.a.a.e
Coho salmon	MODERN SPECIES	20	ENSOKIG00005045146	ENSOKIG00005045114	ENSOKIG00005045108	cdc23 (ENSOKIG00005044943)	kif20a (ENSOKIG00005044720)	ENSOKIG00005044687	dnajc18 (ENSOKIG00005044650)	ppp3ca (ENSOKIG00005043976)	ENSOKIG00005043623	CXXC5 (ENSOKIG00005043591)	zgc:100829 (ENSOKIG00005043582)	puraa (ENSOKIG00005043578)	nrg2a (ENSOKIG00005043433)	ENSOKIG00005043394	pygma (ENSOKIG00005043279) #21	ENSOKIG00005043230 #22	NRXN2 (ENSOKIG00005039744) ##23	PCNX3 (ENSOKIG00005039125)	zgc:165604 (ENSOKIG00005039084)	ENSOKIG00005039062	slc29a2 (ENSOKIG00005039041)	ENSOKIG00005038965	ENSOKIG00005038948	PACS1 (ENSOKIG00005038787)	actn3a (ENSOKIG00005037618)	rbm14a (ENSOKIG00005037530)	ENSOKIG00005037357	dpp3 (ENSOKIG00005037118)	ENSOKIG00005048039	ENSOKIG00005048015	ENSOKIG00005047950
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000046755	CDC23 (ENSOMYG00000046759)	KIF20A (ENSOMYG00000046774)	ENSOMYG00000023672	ENSOMYG00000023251	ppp3ca (ENSOMYG00000023439)	ENSOMYG00000023967	ENSOMYG00000074459	ENSOMYG00000051498	zgc:100829 (ENSOMYG00000024306)	ENSOMYG00000024313	puraa (ENSOMYG00000024324)	nrg2a (ENSOMYG00000024433)	ENSOMYG00000025832	pygma (ENSOMYG00000025024) #21	ENSOMYG00000025829 #22	ENSOMYG00000026031 ##23	ENSOMYG00000026420	zgc:165604 (ENSOMYG00000026514)	ENSOMYG00000071473	ENSOMYG00000026521	ENSOMYG00000026579	ENSOMYG00000026641	ENSOMYG00000059554	actn3a (ENSOMYG00000028079)	rbm14a (ENSOMYG00000035897)	ENSOMYG00000035902	dpp3 (ENSOMYG00000035956)	ENSOMYG00000036082	ENSOMYG00000036207	znrd2 (ENSOMYG00000036392)
Northern pike	MODERN SPECIES	6	ENSELUG00000022081	cdc23 (ENSELUG00000022129)	kif20a (ENSELUG00000022152)	BRD8 (ENSELUG00000000956)	dnajc18 (ENSELUG00000022317)	ppp3ca (ENSELUG00000022406)	ENSELUG00000022490	CXXC5 (ENSELUG00000022501)	zgc:100829 (ENSELUG00000022554)	puraa (ENSELUG00000029128)	nrg2a (ENSELUG00000022713)	ENSELUG00000022722	ENSELUG00000027515	slc22a6l (ENSELUG00000022804)	pygma (ENSELUG00000022863) #21	RASGRP2 (ENSELUG00000022875) #22	NRXN2 (ENSELUG00000023105) ##23	ENSELUG00000031238	PCNX3 (ENSELUG00000023270)	zgc:165604 (ENSELUG00000023306)	slc29a2 (ENSELUG00000023361)	ENSELUG00000023391	bbs1 (ENSELUG00000023454)	ENSELUG00000023546	ENSELUG00000023592	pacs1a (ENSELUG00000023598)	actn3a (ENSELUG00000023625)	rbm14a (ENSELUG00000023633)	ENSELUG00000023688	dpp3 (ENSELUG00000000997)	ENSELUG00000023758
Osteoglossiformes	ANCESTRAL SPECIES	116	ENSGT00950000182950.A	ENSGT00940000164485.a	ENSGT00940000157258 #20	ENSGT00950000183148.b.a.g.b #21	ENSGT00940000154901.C.b	ENSGT01080000257601	ENSGT00940000164430.a.a	ENSGT00940000158778.e	ENSGT00950000183162.a.a.c	ENSGT00940000159674.g	ENSGT00940000157357.e.a.f	ENSGT00940000165110.c	ENSGT00940000166356.e	ENSGT00530000064262.pc.a	ENSGT00940000156931.d	ENSGT00940000160483.k.a #22
Asian bonytongue	MODERN SPECIES	19	sf1 (ENSSFOG00015021978) #20	pygma (ENSSFOG00015021894) #21	slc22a6l (ENSSFOG00015021874)	ENSSFOG00015026442	otub1a (ENSSFOG00015031352)	ENSSFOG00015021850	NRG2 (ENSSFOG00015025951)	puraa (ENSSFOG00015029820)	PSD2 (ENSSFOG00015021796)	ENSSFOG00015025909	CXXC5 (ENSSFOG00015028761)	ube2d2 (ENSSFOG00015021755)	ENSSFOG00015021741	dnajc18 (ENSSFOG00015021720)	BRD8 (ENSSFOG00015021698)	RASGRP2 (ENSSFOG00015021580) #22	NRXN2 (ENSSFOG00015021521) ##23	ENSSFOG00015021551	MAP3K11 (ENSSFOG00015024467)	ENSSFOG00015024612	MAP3K11 (ENSSFOG00015021499)	PCNX3 (ENSSFOG00015021443)	zgc:165604 (ENSSFOG00015021420)	drap1 (ENSSFOG00015021405)	rela (ENSSFOG00015021380)	PPP1CB (ENSSFOG00015021367)	SLC29A2 (ENSSFOG00015021337)	cfbl (ENSSFOG00015021195)	bbs1 (ENSSFOG00015021161)	CAPN1 (ENSSFOG00015021141)	sf3b2 (ENSSFOG00015021125)
P. kingsleyae	MODERN SPECIES	573											ube2d2 (ENSPKIG00000013881)	ENSPKIG00000013951	dnajc18 (ENSPKIG00000014018)	BRD8 (ENSPKIG00000014104)	kif20a (ENSPKIG00000014256)	RASGRP2 (ENSPKIG00000014346) #22
Osteoglossocephalai	ANCESTRAL SPECIES	294																ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00390000008727.a.a.c	ENSGT00390000013169	ENSGT00390000007335	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000158605	ENSGT00390000005232	ENSGT00940000159147.b.a
Clupeocephala	ANCESTRAL SPECIES	65	ENSGT00940000158661.b	ENSGT00940000166258	ENSGT00940000163701.b.b	ENSGT00940000163701.b.a.a.a.a	ENSGT00940000166282.C	ENSGT00940000166282.A	ENSGT00950000183136.b.a.b	ENSGT00940000162009.a	ENSGT00940000154589.b	ENSGT00950000183189.a.a	ENSGT00940000163927.a.b	ENSGT00940000165455	ENSGT00940000164485.a.b	ENSGT00940000164485.a.a	ENSGT00940000157258 #20	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g
Euteleosteomorpha	ANCESTRAL SPECIES	78	ENSGT00940000159589	ENSGT00390000005147	ENSGT00650000094910	ENSGT00600000084617	ENSGT00940000157482.e	ENSGT00390000014237 #18	ENSGT00940000166658.b	ENSGT00940000164485.a.b	ENSGT00940000164485.a.a	ENSGT00940000157258 #20	ENSGT00950000183148.b.a.g.a #21	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g
Acanthomorphata	ANCESTRAL SPECIES	100	ENSGT00940000165455.b	ENSGT00940000163927.a.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F	ENSGT00940000154521.A
Euacanthomorphacea	ANCESTRAL SPECIES	17	ENSGT00940000165455.b	ENSGT00940000163927.a.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F	ENSGT00940000154521.A
Percomorphaceae	ANCESTRAL SPECIES	18	ENSGT00940000165455.b	ENSGT00940000163927.a.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F	ENSGT00940000154521.A
Tiger tail seahorse	MODERN SPECIES	93								kirrel1a (ENSHCOG00000003392)	ndufs2 (ENSHCOG00000003370)	ENSHCOG00000003350	ENSHCOG00000003346	otub1b (ENSHCOG00000003339)	cskmt (ENSHCOG00000003322)	epdl1 (ENSHCOG00000003316)	ENSHCOG00000003306	RASGRP2 (ENSHCOG00000003299) #22	NRXN2 (ENSHCOG00000003248) ##23	ENSHCOG00000003218	ENSHCOG00000003206	tdrd7b (ENSHCOG00000003166)	dctn1a (ENSHCOG00000003131)	fam113 (ENSHCOG00000003076)	ENSHCOG00000003057	ENSHCOG00000003042	ENSHCOG00000002745	ENSHCOG00000001572	syt4 (ENSHCOG00000001562)	SEMA4F (ENSHCOG00000001551)	m1ap (ENSHCOG00000001511)	dok1b (ENSHCOG00000001503)	nagk (ENSHCOG00000001499)
Percomorphaceae_B	ANCESTRAL SPECIES	19	ENSGT00940000163927.a.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F
Ovalentaria	ANCESTRAL SPECIES	20	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000178201	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F
Ovalentaria_B	ANCESTRAL SPECIES	19	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000178201	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F
Pomacentridae	ANCESTRAL SPECIES	28	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000178201	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250.h	ENSGT00940000157250.g	ENSGT00940000171869.A	ENSGT00940000171869.B
Pomacentridae_A	ANCESTRAL SPECIES	22	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000178201	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000162871.j	ENSGT00390000018549	ENSGT00940000157250.h	ENSGT00940000157250.g	ENSGT00940000171869.A	ENSGT00940000171869.B
Amphiprion	ANCESTRAL SPECIES	43	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000162871.j	ENSGT00390000018549	ENSGT00940000157250.h	ENSGT00940000171869.A.c	ENSGT00940000171869.A.d	ENSGT00940000171869.B
Clown anemonefish	MODERN SPECIES	3448	rbm4.3 (ENSAOCG00000007992)	fxr2 (ENSAOCG00000007975)	haus4 (ENSAOCG00000007924)	dock11 (ENSAOCG00000007849)	ENSAOCG00000007552	ENSAOCG00000007527	kirrel1a (ENSAOCG00000007505)	ndufs2 (ENSAOCG00000007442)	ENSAOCG00000007390	ENSAOCG00000007379	otub1b (ENSAOCG00000007368)	cskmt (ENSAOCG00000007338)	epdl1 (ENSAOCG00000007332)	ENSAOCG00000007317	ALPK1 (ENSAOCG00000007298)	RASGRP2 (ENSAOCG00000007276) #22	ENSAOCG00000007213	ENSAOCG00000007201	ENSAOCG00000007187 ##23	ENSAOCG00000007176 ##23	ENSAOCG00000007162
Orange clownfish	MODERN SPECIES	15	rbm4.3 (ENSAPEG00000017288)	fxr2 (ENSAPEG00000017208)	haus4 (ENSAPEG00000017183)	dock11 (ENSAPEG00000016858)	ENSAPEG00000016789	ENSAPEG00000016772	kirrel1a (ENSAPEG00000016701)	ndufs2 (ENSAPEG00000016619)	ENSAPEG00000016571	otub1b (ENSAPEG00000016546)	cskmt (ENSAPEG00000016534)	ENSAPEG00000016521	ENSAPEG00000016509	ALPK1 (ENSAPEG00000016466)	ENSAPEG00000016456	RASGRP2 (ENSAPEG00000016380) #22	ENSAPEG00000016347 ##23	ENSAPEG00000016295 ##23	ENSAPEG00000016282	ENSAPEG00000016217	ENSAPEG00000016155	drap1 (ENSAPEG00000016121)	zgc:63470 (ENSAPEG00000016099)	rela (ENSAPEG00000016091)	ENSAPEG00000016060	SLC29A2 (ENSAPEG00000016030)	S100P (ENSAPEG00000016017)	kiaa0232 (ENSAPEG00000015980)	TBC1D14 (ENSAPEG00000015933)	ENSAPEG00000015919	ENSAPEG00000015915
Spiny chromis	MODERN SPECIES	685											otub1b (ENSAPOG00000004286)	cskmt (ENSAPOG00000004295)	ENSAPOG00000004303	ENSAPOG00000004307	ENSAPOG00000000102	RASGRP2 (ENSAPOG00000004435) #22	ENSAPOG00000004455 ##23
Bicolor damselfish	MODERN SPECIES	2310															ALPK1 (ENSSPAG00000009615)	RASGRP2 (ENSSPAG00000009646) #22
Cichlidae	ANCESTRAL SPECIES	31	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871.g	ENSGT01100000263983	ENSGT00940000162871.h	ENSGT00390000018549	ENSGT00940000157250
Pseudocrenilabrinae	ANCESTRAL SPECIES	18	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059.g	ENSGT00940000162871.g	ENSGT00940000162871.h	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F.k
Nile tilapia	MODERN SPECIES	15	rbm4.3 (ENSONIG00000042982)	fxr2 (ENSONIG00000018373)	haus4 (ENSONIG00000018372)	dock11 (ENSONIG00000018344)	ENSONIG00000040403	kirrel1a (ENSONIG00000018341)	ndufs2 (ENSONIG00000018338)	ENSONIG00000029631	ENSONIG00000027901	otub1b (ENSONIG00000018335)	cskmt (ENSONIG00000018334)	ALPK1 (ENSONIG00000035958)	ENSONIG00000018330	epdl1 (ENSONIG00000037510)	ENSONIG00000043115	RASGRP2 (ENSONIG00000018329) #22	STX12 (ENSONIG00000032914)	ENSONIG00000027534 ##23	NRXN2 (ENSONIG00000018327) ##23	ENSONIG00000035842	ENSONIG00000030097	ENSONIG00000035511	ENSONIG00000041844	MAP3K11 (ENSONIG00000001551)	drap1 (ENSONIG00000001546)	zgc:63470 (ENSONIG00000020958)	rela (ENSONIG00000001545)	ENSONIG00000001540	ENSONIG00000038126	S100P (ENSONIG00000001536)	S100P (ENSONIG00000001535)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	23	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059.g	ENSGT00940000162871.g	ENSGT00940000162871.h	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F.k	ENSGT01100000263482.F.l	ENSGT00940000171869.A.g
Lyretail cichlid	MODERN SPECIES	383	rbm4.3 (ENSNBRG00000012372)	fxr2 (ENSNBRG00000012358)	haus4 (ENSNBRG00000012342)	dock11 (ENSNBRG00000012240)	ENSNBRG00000012212	ENSNBRG00000012201	kirrel1a (ENSNBRG00000012154)	ndufs2 (ENSNBRG00000012123)	ENSNBRG00000012104	ENSNBRG00000012080	otub1b (ENSNBRG00000012064)	cskmt (ENSNBRG00000012057)	ENSNBRG00000012044	epdl1 (ENSNBRG00000012034)	ENSNBRG00000012028	ENSNBRG00000012001 #22	ENSNBRG00000011990 ##23	NRXN2 (ENSNBRG00000011787) ##23	MAP3K11 (ENSNBRG00000011726)	drap1 (ENSNBRG00000011701)	zgc:63470 (ENSNBRG00000011689)	rela (ENSNBRG00000011601)	ENSNBRG00000011559	ENSNBRG00000011541	S100P (ENSNBRG00000011395)	S100P (ENSNBRG00000011347)	kiaa0232 (ENSNBRG00000011338)	TBC1D14 (ENSNBRG00000011298)	ENSNBRG00000011286	ENSNBRG00000011259	ccdc96 (ENSNBRG00000011241)
Haplochromini	ANCESTRAL SPECIES	28	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059.g	ENSGT00940000162871.g	ENSGT00940000162871.h	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F.k	ENSGT01100000263482.F.l	ENSGT00940000171869.A.g
Burton s mouthbrooder	MODERN SPECIES	402	rbm4.3 (ENSHBUG00000009051)	fxr2 (ENSHBUG00000009073)	haus4 (ENSHBUG00000009106)	dock11 (ENSHBUG00000009571)	ENSHBUG00000009621	ENSHBUG00000009636	kirrel1a (ENSHBUG00000009748)	ndufs2 (ENSHBUG00000009829)	ENSHBUG00000009855	ENSHBUG00000009869	otub1b (ENSHBUG00000009905)	ENSHBUG00000009937	cskmt (ENSHBUG00000009964)	ENSHBUG00000009942	ALPK1 (ENSHBUG00000010000)	RASGRP2 (ENSHBUG00000010124) #22	ENSHBUG00000010143	NRXN2 (ENSHBUG00000010203) ##23	MAP3K11 (ENSHBUG00000010240)	drap1 (ENSHBUG00000000268)	zgc:63470 (ENSHBUG00000010267)	rela (ENSHBUG00000010305)	ENSHBUG00000010372	ENSHBUG00000010389	ENSHBUG00000010405	S100P (ENSHBUG00000010458)	S100P (ENSHBUG00000010469)	kiaa0232 (ENSHBUG00000010486)	TBC1D14 (ENSHBUG00000010544)
Haplochromini_A	ANCESTRAL SPECIES	62	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059.g	ENSGT00940000162871.g	ENSGT00940000162871.h	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F.k
P. nyererei	MODERN SPECIES	409	rbm4.3 (ENSPNYG00000018564)	fxr2 (ENSPNYG00000018583)	haus4 (ENSPNYG00000018601)	dock11 (ENSPNYG00000018715)	ENSPNYG00000019003	ENSPNYG00000019010	kirrel1a (ENSPNYG00000019020)	ndufs2 (ENSPNYG00000019062)	ENSPNYG00000019098	ENSPNYG00000019111	otub1b (ENSPNYG00000019127)	cskmt (ENSPNYG00000019154)	ENSPNYG00000019163	ENSPNYG00000019177	ALPK1 (ENSPNYG00000019190)	RASGRP2 (ENSPNYG00000019218) #22	ENSPNYG00000019251 ##23	NRXN2 (ENSPNYG00000019318) ##23	ENSPNYG00000019524	ENSPNYG00000019533	MAP3K11 (ENSPNYG00000019544)	drap1 (ENSPNYG00000019568)	rela (ENSPNYG00000019587)	zgc:63470 (ENSPNYG00000019618)	ENSPNYG00000019629	ENSPNYG00000019664	S100P (ENSPNYG00000019702)	S100P (ENSPNYG00000019832)	kiaa0232 (ENSPNYG00000019845)	TBC1D14 (ENSPNYG00000019861)	ENSPNYG00000019902
Haplochromini_B	ANCESTRAL SPECIES	82	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00980000198573.a.b.y.b.b.a.b.a.a.b.b	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059.g	ENSGT00940000162871.g	ENSGT00940000162871.h	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F.k
Eastern happy	MODERN SPECIES	15	rbm4.3 (ENSACLG00000010642)	fxr2 (ENSACLG00000010657)	haus4 (ENSACLG00000010683)	dock11 (ENSACLG00000010763)	ENSACLG00000010891	ENSACLG00000010933	kirrel1a (ENSACLG00000010953)	ndufs2 (ENSACLG00000011084)	ENSACLG00000011118	ENSACLG00000011130	otub1b (ENSACLG00000011155)	cskmt (ENSACLG00000011174)	ENSACLG00000011183	ENSACLG00000011191	ALPK1 (ENSACLG00000011218)	RASGRP2 (ENSACLG00000011246) #22	ENSACLG00000011581	ENSACLG00000011588	NRXN2 (ENSACLG00000011961) ##23	ENSACLG00000012094	MAP3K11 (ENSACLG00000012099)	drap1 (ENSACLG00000012111)	rela (ENSACLG00000012132)	zgc:63470 (ENSACLG00000012158)	ENSACLG00000012177	ENSACLG00000012223	ENSACLG00000012228	ENSACLG00000012291	S100P (ENSACLG00000012321)	S100P (ENSACLG00000012327)	kiaa0232 (ENSACLG00000012340)
Zebra mbuna	MODERN SPECIES	1106	fxr2 (ENSMZEG00005007512)	haus4 (ENSMZEG00005007782)	dock11 (ENSMZEG00005007842)	ENSMZEG00005008061	ENSMZEG00005008071	kirrel1a (ENSMZEG00005008091)	ndufs2 (ENSMZEG00005008133)	ENSMZEG00005008155	ENSMZEG00005008167	otub1b (ENSMZEG00005008193)	cskmt (ENSMZEG00005008208)	ENSMZEG00005008226	ENSMZEG00005008254	ENSMZEG00005008269	ENSMZEG00005008276	RASGRP2 (ENSMZEG00005008308) #22	ENSMZEG00005008357 ##23	NRXN2 (ENSMZEG00005008393) ##23	ENSMZEG00005008482	ENSMZEG00005008498	MAP3K11 (ENSMZEG00005008508)	drap1 (ENSMZEG00005008517)	zgc:63470 (ENSMZEG00005008532)	rela (ENSMZEG00005008549)	ENSMZEG00005008610	ENSMZEG00005008662	ENSMZEG00005008709	zcchc4 (ENSMZEG00005008724)	ENSMZEG00005008738	pde5ab (ENSMZEG00005008758)	mad2l1 (ENSMZEG00005008797)
Midas cichlid	MODERN SPECIES	640																RASGRP2 (ENSACIG00000012366) #22	ENSACIG00000012441 ##23	NRXN2 (ENSACIG00000012463) ##23
Atherinomorphae	ANCESTRAL SPECIES	49	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000178201	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT01100000263482.F
Oryzias	ANCESTRAL SPECIES	42	ENSGT00390000014634	ENSGT00940000178201	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000170561.b	ENSGT00940000153669.b	ENSGT00940000154344.a	ENSGT00950000182968.d.a.a.a.d.b.a.a.a.a.b	ENSGT00940000162676.a.b.b.b.a.f.a.b	ENSGT00940000177059
Oryzias_b	ANCESTRAL SPECIES	37	ENSGT00390000014634	ENSGT00940000178201	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000170561.b	ENSGT00940000153669.b	ENSGT00940000154344.a	ENSGT00940000162676.a.b.b.b.a.e.b.a.b	ENSGT00940000162676.a.b.b.b.a.f.a.b	ENSGT00940000177059
Indian medaka	MODERN SPECIES	642														ENSOMEG00000021577	ENSOMEG00000021600	RASGRP2 (ENSOMEG00000021680) #22
Javanese ricefish	MODERN SPECIES	9	rbm4.3 (ENSOJAG00000024061)	fxr2 (ENSOJAG00000024072)	haus4 (ENSOJAG00000024089)	ENSOJAG00000024111	ENSOJAG00000024112	kirrel1a (ENSOJAG00000024114)	ndufs2 (ENSOJAG00000024125)	ENSOJAG00000024127	ENSOJAG00000024128	otub1b (ENSOJAG00000024129)	cskmt (ENSOJAG00000024130)	ENSOJAG00000024131	ENSOJAG00000024132	ENSOJAG00000024133	ENSOJAG00000002011	RASGRP2 (ENSOJAG00000002097) #22	ENSOJAG00000002215 ##23	NRXN2 (ENSOJAG00000002233) ##23	ENSOJAG00000002261	ENSOJAG00000002311	MAP3K11 (ENSOJAG00000002323)	drap1 (ENSOJAG00000002363)	zgc:63470 (ENSOJAG00000002372)	rela (ENSOJAG00000002383)	ENSOJAG00000002441	SLC29A2 (ENSOJAG00000002534)	ENSOJAG00000002560	ENSOJAG00000002571	mtmr1a (ENSOJAG00000002642)	ENSOJAG00000003072	ENSOJAG00000003147
Oryzias_a	ANCESTRAL SPECIES	66	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.c.d.b	ENSGT00940000164430.a.b.a.c.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640.e	ENSGT00390000011640.f	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000170561.b	ENSGT00940000153669.b	ENSGT00940000154344.a	ENSGT00950000182968.d.a.a.a.d.b.a.a.a.a.b	ENSGT00940000162676.a.b.b.b.a.f.a.b.a	ENSGT00940000162871.f
Japanese Medaka HdrR	MODERN SPECIES	9	ENSORLG00000011352	kirrel1a (ENSORLG00000011345)	ndufs2 (ENSORLG00000011324)	ENSORLG00000030189	ENSORLG00000011259	otub1b (ENSORLG00000011248)	cskmt (ENSORLG00000011219)	ENSORLG00000011214	ENSORLG00000018598	ENSORLG00000027363	ENSORLG00000012350	ENSORLG00000011204	ENSORLG00000025308	ENSORLG00000012361	ENSORLG00000022901	RASGRP2 (ENSORLG00000012389) #22	ENSORLG00000022368	ENSORLG00000011183 ##23	ENSORLG00000022292 ##23	ENSORLG00000011144	ENSORLG00000011136	drap1 (ENSORLG00000011115)	zgc:63470 (ENSORLG00000026406)	zgc:63470 (ENSORLG00000011109)	rela (ENSORLG00000011104)	ENSORLG00000011100	SLC29A2 (ENSORLG00000011065)	ENSORLG00000029738	mtmr1a (ENSORLG00000010894)	ENSORLG00000024407	ENSORLG00000025391
Chinese medaka	MODERN SPECIES	58																RASGRP2 (ENSOSIG00000014407) #22	NRXN2 (ENSOSIG00000014410) ##23	ENSOSIG00000014499 ##23	ENSOSIG00000014501
Cyprinodontiformes	ANCESTRAL SPECIES	39	ENSGT00940000165455.a	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064.h	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT01100000263482.F
Cyprinodontoidei	ANCESTRAL SPECIES	50	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT00390000003894	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064.h	ENSGT00940000154292.a.b.c.a	ENSGT00940000161064.g	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250
Poeciliinae	ANCESTRAL SPECIES	40	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064.h	ENSGT00940000154292.a.b.c.a	ENSGT00940000161064.g	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250
Poecilia	ANCESTRAL SPECIES	40	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064.h	ENSGT00940000154292.a.b.c.a	ENSGT00940000161064.g	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250
NAME_6	ANCESTRAL SPECIES	37	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064.h	ENSGT00940000161064.g	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C
Sailfin molly	MODERN SPECIES	14	rbm4.3 (ENSPLAG00000006077)	fxr2 (ENSPLAG00000006074)	haus4 (ENSPLAG00000006064)	dock11 (ENSPLAG00000005976)	ENSPLAG00000004730	ENSPLAG00000004724	kirrel1a (ENSPLAG00000004708)	ENSPLAG00000004674	ENSPLAG00000004665	otub1b (ENSPLAG00000004653)	cskmt (ENSPLAG00000004614)	epdl1 (ENSPLAG00000004608)	ENSPLAG00000004601	ENSPLAG00000004578	ALPK1 (ENSPLAG00000004563)	RASGRP2 (ENSPLAG00000004509) #22
Amazon molly	MODERN SPECIES	324	rbm4.3 (ENSPFOG00000006821)	fxr2 (ENSPFOG00000006858)	haus4 (ENSPFOG00000007084)	dock11 (ENSPFOG00000007208)	ENSPFOG00000008558	ENSPFOG00000008564	kirrel1a (ENSPFOG00000008597)	ndufs2 (ENSPFOG00000008814)	ENSPFOG00000023699	otub1b (ENSPFOG00000008913)	cskmt (ENSPFOG00000020763)	epdl1 (ENSPFOG00000008977)	ENSPFOG00000009028	ENSPFOG00000009033	ALPK1 (ENSPFOG00000009067)	RASGRP2 (ENSPFOG00000009173) #22	ENSPFOG00000009425 ##23	NRXN2 (ENSPFOG00000009439) ##23	ENSPFOG00000023560	MAP3K11 (ENSPFOG00000009712)	ENSPFOG00000024836	drap1 (ENSPFOG00000009825)	rela (ENSPFOG00000009881)	zgc:63470 (ENSPFOG00000020764)	ENSPFOG00000009941	SLC29A2 (ENSPFOG00000010057)	ENSPFOG00000022978	S100P (ENSPFOG00000010270)	kiaa0232 (ENSPFOG00000010281)	TBC1D14 (ENSPFOG00000010338)	ENSPFOG00000010566
Guppy	MODERN SPECIES	448	rbm4.3 (ENSPREG00000002093)	fxr2 (ENSPREG00000002076)	haus4 (ENSPREG00000002010)	dock11 (ENSPREG00000001054)	kirrel1a (ENSPREG00000000886)	ndufs2 (ENSPREG00000000871)	ENSPREG00000000864	ENSPREG00000000818	otub1b (ENSPREG00000000776)	cskmt (ENSPREG00000000773)	epdl1 (ENSPREG00000000739)	ENSPREG00000000696	ENSPREG00000000667	ALPK1 (ENSPREG00000000599)	ENSPREG00000000571	RASGRP2 (ENSPREG00000022093) #22	ENSPREG00000022083 ##23	ENSPREG00000022074	ENSPREG00000022053 ##23	ENSPREG00000022040	ENSPREG00000022028	MAP3K11 (ENSPREG00000022005)	drap1 (ENSPREG00000021987)	zgc:63470 (ENSPREG00000021977)	rela (ENSPREG00000021967)	PPP1CB (ENSPREG00000021947)	SLC29A2 (ENSPREG00000021932)	ENSPREG00000021925	ENSPREG00000021921	S100P (ENSPREG00000021912)	kiaa0232 (ENSPREG00000021904)
Platyfish	MODERN SPECIES	5	rbm4.3 (ENSXMAG00000025173)	fxr2 (ENSXMAG00000011669)	haus4 (ENSXMAG00000011656)	dock11 (ENSXMAG00000011628)	ENSXMAG00000011627	ENSXMAG00000029492	kirrel1a (ENSXMAG00000011602)	ndufs2 (ENSXMAG00000011582)	ENSXMAG00000011569	otub1b (ENSXMAG00000024606)	epdl1 (ENSXMAG00000029180)	cskmt (ENSXMAG00000020830)	ENSXMAG00000011537	ENSXMAG00000028079	ALPK1 (ENSXMAG00000011532)	RASGRP2 (ENSXMAG00000011474) #22	ENSXMAG00000019662 ##23	ENSXMAG00000023855	NRXN2 (ENSXMAG00000011471) ##23	ENSXMAG00000026952	MAP3K11 (ENSXMAG00000011458)	drap1 (ENSXMAG00000011441)	zgc:63470 (ENSXMAG00000019661)	rela (ENSXMAG00000011436)	ENSXMAG00000011416	SLC29A2 (ENSXMAG00000004984)	ENSXMAG00000025499	S100P (ENSXMAG00000011414)	kiaa0232 (ENSXMAG00000011409)	TBC1D14 (ENSXMAG00000011398)	ENSXMAG00000024416
NAME_4	ANCESTRAL SPECIES	197	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT00390000003894	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000177832	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749
Mummichog	MODERN SPECIES	2187	fxr2 (ENSFHEG00000023088)	haus4 (ENSFHEG00000022986)	dock11 (ENSFHEG00000022952)	ENSFHEG00000022719	ENSFHEG00000022709	kirrel1a (ENSFHEG00000022700)	ndufs2 (ENSFHEG00000022619)	ENSFHEG00000022560	ENSFHEG00000022555	otub1b (ENSFHEG00000022545)	cskmt (ENSFHEG00000022529)	epdl1 (ENSFHEG00000022520)	ENSFHEG00000022513	ENSFHEG00000022501	ALPK1 (ENSFHEG00000022485)	RASGRP2 (ENSFHEG00000022431) #22	ENSFHEG00000022296 ##23	ENSFHEG00000022280 ##23	ENSFHEG00000022263	ENSFHEG00000022244	ENSFHEG00000022226	ENSFHEG00000022205	ENSFHEG00000022194	zgc:63470 (ENSFHEG00000022177)	rela (ENSFHEG00000022166)	ENSFHEG00000022150	SLC29A2 (ENSFHEG00000022110)	S100P (ENSFHEG00000022104)	kiaa0232 (ENSFHEG00000022089)	TBC1D14 (ENSFHEG00000022064)	ENSFHEG00000000719
Sheepshead minnow	MODERN SPECIES	1048										ENSCVAG00000008497	otub1b (ENSCVAG00000008522)	cskmt (ENSCVAG00000008527)	ENSCVAG00000008538	ENSCVAG00000008548	ENSCVAG00000008577	RASGRP2 (ENSCVAG00000008614) #22
Aplocheiloidei	ANCESTRAL SPECIES	143	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d.a	ENSGT00940000164430.a.b.a.d.b	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22
Mangrove rivulus	MODERN SPECIES	63				cftr (ENSKMAG00000004497)	ENSKMAG00000004452	kirrel1a (ENSKMAG00000004365)	ndufs2 (ENSKMAG00000004339)	ENSKMAG00000004332	ENSKMAG00000004321	otub1b (ENSKMAG00000004270)	cskmt (ENSKMAG00000004256)	ENSKMAG00000004249	ENSKMAG00000004240	epdl1 (ENSKMAG00000004233)	ENSKMAG00000004167	RASGRP2 (ENSKMAG00000004070) #22	ENSKMAG00000003988	ENSKMAG00000003965 ##23	ENSKMAG00000003946 ##23	ENSKMAG00000003885	ENSKMAG00000003835	drap1 (ENSKMAG00000003806)	zgc:63470 (ENSKMAG00000003796)	rela (ENSKMAG00000003774)	ENSKMAG00000003725	ENSKMAG00000003706	ENSKMAG00000003687	S100P (ENSKMAG00000003636)	kiaa0232 (ENSKMAG00000003615)	TBC1D14 (ENSKMAG00000003592)	ENSKMAG00000003578
Turquoise killifish	MODERN SPECIES	1619	cth1 (ENSNFUG00015022111)	mta2 (ENSNFUG00015022120)	EML3 (ENSNFUG00015022191)	ECSIT (ENSNFUG00015022725)	ENSNFUG00015022741	ENSNFUG00015022746	ndufs2 (ENSNFUG00015022766)	ENSNFUG00015023004	KIRRELA (ENSNFUG00015023029)	ENSNFUG00015023426	ENSNFUG00015023428	dock11 (ENSNFUG00015023567)	ENSNFUG00015024963	FXR2 (ENSNFUG00015025003)	Nfu_g_1_022524 (ENSNFUG00015025135)	ENSNFUG00015025136 #22	ENSNFUG00015025143	ENSNFUG00015025145	rbm4.3 (ENSNFUG00015025147)	ENSNFUG00015025151	epdl1 (ENSNFUG00015025153)	ENSNFUG00015025155	ENSNFUG00015025156	zgc:153383 (ENSNFUG00015025166)	SLC16A10 (ENSNFUG00015025167)	CNIH3 (ENSNFUG00015025169)	FRK (ENSNFUG00015025170)	nt5dc1 (ENSNFUG00015025171)	ENSNFUG00015025172	CCDC71 (ENSNFUG00015025175)	NISCH (ENSNFUG00015025179)
Percomorphaceae_C	ANCESTRAL SPECIES	20	ENSGT00940000163927.a.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C
Eupercaria	ANCESTRAL SPECIES	19	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C
Tetraodontidae	ANCESTRAL SPECIES	47	ENSGT00940000154589.b	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01100000264205	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a
Tetraodon	MODERN SPECIES	26	fam110d (ENSTNIG00000012104)	ENSTNIG00000012105	SLC9A1 (ENSTNIG00000012106)	MAN1C1 (ENSTNIG00000005215)	GJA9 (ENSTNIG00000006130)	rragca (ENSTNIG00000006131)	ENSTNIG00000019794	cnr2 (ENSTNIG00000004059)	kirrel1a (ENSTNIG00000003847)	ndufs2 (ENSTNIG00000003846)	ENSTNIG00000003845	ENSTNIG00000003844	cskmt (ENSTNIG00000001012)	ENSTNIG00000002095	ENSTNIG00000002096	RASGRP2 (ENSTNIG00000002097) #22	ENSTNIG00000004432 ##23	ENSTNIG00000010867 ##23	MAP3K11 (ENSTNIG00000003891)	taf6l (ENSTNIG00000004574)	cth1 (ENSTNIG00000000740)	mta2 (ENSTNIG00000004573)	ecsit (ENSTNIG00000004572)	rtn3 (ENSTNIG00000004819)	men1 (ENSTNIG00000004823) #18	map4k2 (ENSTNIG00000004822)	rbm4.2 (ENSTNIG00000000316)	rbm4.1 (ENSTNIG00000004821)	sf1 (ENSTNIG00000004820) #20	pygmb (ENSTNIG00000003522) #21	ENSTNIG00000005401
Fugu	MODERN SPECIES	20	TIFA (ENSTRUG00000010683)	rbm4.3 (ENSTRUG00000023874)	fxr2 (ENSTRUG00000010696)	haus4 (ENSTRUG00000011057)	dock11 (ENSTRUG00000011093)	ENSTRUG00000011762	ENSTRUG00000032902	kirrel1a (ENSTRUG00000011778)	ndufs2 (ENSTRUG00000011914)	ENSTRUG00000022687	ENSTRUG00000019818	otub1b (ENSTRUG00000011966)	cskmt (ENSTRUG00000027033)	epdl1 (ENSTRUG00000012059)	ENSTRUG00000012128	RASGRP2 (ENSTRUG00000012150) #22	ENSTRUG00000021449	ENSTRUG00000022261	NRXN2 (ENSTRUG00000012376) ##23	MAP3K11 (ENSTRUG00000012557)	drap1 (ENSTRUG00000012644)	taf6l (ENSTRUG00000012717)	cth1 (ENSTRUG00000012770)	mta2 (ENSTRUG00000012797)	ecsit (ENSTRUG00000013028)	ZFTA (ENSTRUG00000021011)	rnt3 (ENSTRUG00000013072)	men1 (ENSTRUG00000013106) #18	map4k2 (ENSTRUG00000013185)	rbm4.2 (ENSTRUG00000013328)	rbm4.1 (ENSTRUG00000013334)
Eupecaria_A	ANCESTRAL SPECIES	20	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C
Ballan wrasse	MODERN SPECIES	241	rbm4.3 (ENSLBEG00000001071)	haus4 (ENSLBEG00000001087)	dock11 (ENSLBEG00000001111)	ENSLBEG00000001254	kirrel1a (ENSLBEG00000001300)	ndufs2 (ENSLBEG00000001348)	ENSLBEG00000001412	ENSLBEG00000001433	otub1b (ENSLBEG00000001527)	cskmt (ENSLBEG00000001556)	epdl1 (ENSLBEG00000001599)	ENSLBEG00000001668	ENSLBEG00000001770	ENSLBEG00000002102	ALPK1 (ENSLBEG00000002121)	RASGRP2 (ENSLBEG00000002187) #22
Eupecaria_B	ANCESTRAL SPECIES	20	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C
Perciformes	ANCESTRAL SPECIES	19	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT00390000003894	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT00940000156309.B.h	ENSGT00940000153783.b.a.b
Cottioidei	ANCESTRAL SPECIES	20	ENSGT00940000165455.a	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT00390000003894	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT00940000156309.B.h	ENSGT00940000153783.b.a.b	ENSGT00940000165992.a.a
Stickleback	MODERN SPECIES	7	rbm4.3 (ENSGACG00000019980)	ENSGACG00000019982	fxr2 (ENSGACG00000019983)	haus4 (ENSGACG00000019989)	dock11 (ENSGACG00000019991)	ENSGACG00000019997	ENSGACG00000020001	ENSGACG00000020003	kirrel1a (ENSGACG00000020005)	ndufs2 (ENSGACG00000020006)	ENSGACG00000020016	otub1b (ENSGACG00000020018)	cskmt (ENSGACG00000020022)	ENSGACG00000020023	epdl1 (ENSGACG00000020024)	RASGRP2 (ENSGACG00000020027) #22	ENSGACG00000020028 ##23	ENSGACG00000020029	NRXN2 (ENSGACG00000020030) ##23	MAP3K11 (ENSGACG00000020033)	drap1 (ENSGACG00000020035)	zgc:63470 (ENSGACG00000020038)	rela (ENSGACG00000020039)	ENSGACG00000020043	SLC29A2 (ENSGACG00000020057)	S100P (ENSGACG00000020061)	kiaa0232 (ENSGACG00000020062)	kiaa0232 (ENSGACG00000020063)	TBC1D14 (ENSGACG00000020066)	ENSGACG00000020069	senp3b (ENSGACG00000020071)
Lumpfish	MODERN SPECIES	9	ENSCLMG00005016852	rbm4.3 (ENSCLMG00005016851)	fxr2 (ENSCLMG00005012677)	haus4 (ENSCLMG00005012646)	dock11 (ENSCLMG00005003991)	ENSCLMG00005003906	ENSCLMG00005003904	kirrel1a (ENSCLMG00005003896)	ndufs2 (ENSCLMG00005003802)	ENSCLMG00005003797	ENSCLMG00005003795	otub1b (ENSCLMG00005003516)	cskmt (ENSCLMG00005003508)	ENSCLMG00005003506	epdl1 (ENSCLMG00005003505)	RASGRP2 (ENSCLMG00005003342) #22	ENSCLMG00005003331	NRXN2 (ENSCLMG00005003316) ##23	ENSCLMG00005003313	drap1 (ENSCLMG00005003312)	zgc:63470 (ENSCLMG00005003311)	rela (ENSCLMG00005003299)	ENSCLMG00005002658	SLC29A2 (ENSCLMG00005002572)	S100P (ENSCLMG00005002570)	kiaa0232 (ENSCLMG00005002569)	TBC1D14 (ENSCLMG00005001606)	ENSCLMG00005001366	senp3b (ENSCLMG00005020868)	eif4a1a (ENSCLMG00005020514)	sox19b (ENSCLMG00005020513)
Perciformes_a	ANCESTRAL SPECIES	18	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT00940000156309.B.h	ENSGT00940000153783.b.a.b
Channel bull blenny	MODERN SPECIES	9	fxr2 (ENSCGOG00000005897)	haus4 (ENSCGOG00000007880)	dock11 (ENSCGOG00000007926)	ENSCGOG00000010492	ENSCGOG00000010494	ENSCGOG00000010495	kirrel1a (ENSCGOG00000010506)	ndufs2 (ENSCGOG00000011153)	ENSCGOG00000012164	ENSCGOG00000012166	otub1b (ENSCGOG00000012174)	cskmt (ENSCGOG00000012211)	ENSCGOG00000012212	ENSCGOG00000012214	ALPK1 (ENSCGOG00000012217)	RASGRP2 (ENSCGOG00000012244) #22	NRXN2 (ENSCGOG00000012266) ##23	MAP3K11 (ENSCGOG00000012539)	drap1 (ENSCGOG00000012547)	rela (ENSCGOG00000012555)	zgc:63470 (ENSCGOG00000012561)	PPP1CB (ENSCGOG00000012574)	SLC29A2 (ENSCGOG00000013569)	S100P (ENSCGOG00000013791)	kiaa0232 (ENSCGOG00000013792)	TBC1D14 (ENSCGOG00000013824)	ENSCGOG00000014999	senp3b (ENSCGOG00000015001)	eif4a1a (ENSCGOG00000015060)	sox19b (ENSCGOG00000016210)	mpdu1b (ENSCGOG00000016213)
Pike perch	MODERN SPECIES	78	fxr2 (ENSSLUG00000002637)	haus4 (ENSSLUG00000003428)	dock11 (ENSSLUG00000004522)	ENSSLUG00000020681	ENSSLUG00000020685	kirrel1a (ENSSLUG00000020722)	ndufs2 (ENSSLUG00000021054)	ENSSLUG00000022022	ENSSLUG00000022027	otub1b (ENSSLUG00000022045)	cskmt (ENSSLUG00000022069)	ENSSLUG00000022074	ENSSLUG00000022076	ENSSLUG00000022080	ALPK1 (ENSSLUG00000022084)	RASGRP2 (ENSSLUG00000022117) #22
Eupecaria_C	ANCESTRAL SPECIES	20	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F	ENSGT00940000171869.C
Gilthead seabream	MODERN SPECIES	1	rbm4.3 (ENSSAUG00010022530)	fxr2 (ENSSAUG00010022439)	haus4 (ENSSAUG00010022434)	dock11 (ENSSAUG00010008064)	ENSSAUG00010007928	ENSSAUG00010007925	kirrel1a (ENSSAUG00010006684)	NDUFS2 (ENSSAUG00010004779)	ENSSAUG00010004731	ENSSAUG00010004725	otub1b (ENSSAUG00010004443)	cskmt (ENSSAUG00010004439)	ENSSAUG00010004302	ENSSAUG00010004025	ENSSAUG00010003906	RASGRP2 (ENSSAUG00010003883) #22	ENSSAUG00010003871	NRXN2 (ENSSAUG00010001511) ##23	ENSSAUG00010001340	drap1 (ENSSAUG00010001329)	zgc:63470 (ENSSAUG00010001325)	rela (ENSSAUG00010001308)	ENSSAUG00010021908	ENSSAUG00010021906	S100P (ENSSAUG00010021905)	kiaa0232 (ENSSAUG00010021904)	TBC1D14 (ENSSAUG00010021637)	ENSSAUG00010021627	ccdc96 (ENSSAUG00010021624)	tada2b (ENSSAUG00010021620)	grpel1 (ENSSAUG00010021618)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	19	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT01100000263983	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F	ENSGT01100000266235
European seabass	MODERN SPECIES	16	rbm4.3 (ENSDLAG00005026092)	ENSDLAG00005033645	rbm4.3 (ENSDLAG00005027033)	fxr2 (ENSDLAG00005026008)	ENSDLAG00005025981	dock11 (ENSDLAG00005024860)	ENSDLAG00005028151	ENSDLAG00005024630	ndufs2 (ENSDLAG00005024309)	ENSDLAG00005024293	ENSDLAG00005029477	ENSDLAG00005024269	ENSDLAG00005031874	ENSDLAG00005024229	ENSDLAG00005024160	ENSDLAG00005024138 #22	ENSDLAG00005024132	ENSDLAG00005023246 ##23	ENSDLAG00005023190	zgc:63470 (ENSDLAG00005026584)	rela (ENSDLAG00005030281)	ENSDLAG00005023126	ENSDLAG00005023106	ENSDLAG00005023099	ENSDLAG00005023096	S100P (ENSDLAG00005023088)	kiaa0232 (ENSDLAG00005023090)	TBC1D14 (ENSDLAG00005022527)	ENSDLAG00005022497	ENSDLAG00005022490	ENSDLAG00005026719
Large yellow croaker	MODERN SPECIES	485	rbm4.3 (ENSLCRG00005023854)	fxr2 (ENSLCRG00005023851)	haus4 (ENSLCRG00005023850)	dock11 (ENSLCRG00005021731)	ENSLCRG00005020707	ENSLCRG00005020702	kirrel1a (ENSLCRG00005020459)	ndufs2 (ENSLCRG00005019953)	ENSLCRG00005019914	ENSLCRG00005019913	otub1b (ENSLCRG00005019831)	cskmt (ENSLCRG00005019800)	epdl1 (ENSLCRG00005019786)	ENSLCRG00005019759	ALPK1 (ENSLCRG00005019751)	RASGRP2 (ENSLCRG00005019705) #22	ENSLCRG00005019702	NRXN2 (ENSLCRG00005015683) ##23	ENSLCRG00005015372	MAP3K11 (ENSLCRG00005015370)	drap1 (ENSLCRG00005015357)	zgc:63470 (ENSLCRG00005015354)	rela (ENSLCRG00005015346)	ENSLCRG00005014889	SLC29A2 (ENSLCRG00005014811)	S100P (ENSLCRG00005014798)	ENSLCRG00005014795	kiaa0232 (ENSLCRG00005014793)	TBC1D14 (ENSLCRG00005013912)	ENSLCRG00005013784	ccdc96 (ENSLCRG00005013782)
Percomorphaceae_D	ANCESTRAL SPECIES	20	ENSGT00940000163927.a.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT00940000154521.A	ENSGT00940000157318
Carangaria	ANCESTRAL SPECIES	20	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT00940000154521.A
Carangaria_A	ANCESTRAL SPECIES	32	ENSGT00940000154589.b	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F	ENSGT00950000183337
Seriola	ANCESTRAL SPECIES	43	ENSGT00940000165455.a	ENSGT00940000154589.b	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT00940000154521.A	ENSGT00940000157318
Greater amberjack	MODERN SPECIES	69	ENSSDUG00000018448	rbm4.3 (ENSSDUG00000018435)	TIFA (ENSSDUG00000018430)	rbm4.3 (ENSSDUG00000018422)	fxr2 (ENSSDUG00000018392)	haus4 (ENSSDUG00000018377)	dock11 (ENSSDUG00000018282)	ENSSDUG00000018260	ENSSDUG00000018246	kirrel1a (ENSSDUG00000018186)	ENSSDUG00000018170	ENSSDUG00000018150	otub1b (ENSSDUG00000018140)	cskmt (ENSSDUG00000018128)	ENSSDUG00000018081	RASGRP2 (ENSSDUG00000017985) #22	ENSSDUG00000017972 ##23	ENSSDUG00000017967	NRXN2 (ENSSDUG00000017669) ##23	MAP3K11 (ENSSDUG00000017588)	drap1 (ENSSDUG00000017563)	zgc:63470 (ENSSDUG00000017554)	rela (ENSSDUG00000017532)	ENSSDUG00000017502	SLC29A2 (ENSSDUG00000017482)	S100P (ENSSDUG00000017469)	kiaa0232 (ENSSDUG00000017437)	TBC1D14 (ENSSDUG00000017401)	ENSSDUG00000017388	ENSSDUG00000017382	ENSSDUG00000017369
Yellowtail amberjack	MODERN SPECIES	2692														epdl1 (ENSSLDG00000025035)	ENSSLDG00000025031	RASGRP2 (ENSSLDG00000025017) #22	ENSSLDG00000025012 ##23	ENSSLDG00000025010	NRXN2 (ENSSLDG00000024965) ##23	ENSSLDG00000024957
Barramundi perch	MODERN SPECIES	51	ENSLCAG00010008070	rbm4.3 (ENSLCAG00010008072)	fxr2 (ENSLCAG00010008128)	haus4 (ENSLCAG00010008361)	dock11 (ENSLCAG00010008571)	ENSLCAG00010009442	ENSLCAG00010009446	kirrel1a (ENSLCAG00010009504)	ndufs2 (ENSLCAG00010009760)	ENSLCAG00010009933	ENSLCAG00010009936	otub1b (ENSLCAG00010009942)	cskmt (ENSLCAG00010009952)	ENSLCAG00010009958	ALPK1 (ENSLCAG00010009963)	RASGRP2 (ENSLCAG00010009966) #22	NRXN2 (ENSLCAG00010010046) ##23	ENSLCAG00010010205	MAP3K11 (ENSLCAG00010010208)	drap1 (ENSLCAG00010010213)	zgc:63470 (ENSLCAG00010010216)	rela (ENSLCAG00010010220)	PPP1CB (ENSLCAG00010010234)	SLC29A2 (ENSLCAG00010010306)	ENSLCAG00010010313	S100P (ENSLCAG00010010315)	kiaa0232 (ENSLCAG00010010319)	TBC1D14 (ENSLCAG00010010324)	ENSLCAG00010010331	ENSLCAG00010010332	tada2b (ENSLCAG00010010338)
Pleuronectoidei	ANCESTRAL SPECIES	17	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT00940000154521.A	ENSGT00940000157318	ENSGT00390000005589.a.a	ENSGT01030000234563.b.a.a
Turbot	MODERN SPECIES	16	rbm4.3 (ENSSMAG00000013653)	fxr2 (ENSSMAG00000013659)	ENSSMAG00000013696	dock11 (ENSSMAG00000013705)	ENSSMAG00000013806	ENSSMAG00000034669	kirrel1a (ENSSMAG00000013824)	ndufs2 (ENSSMAG00000032900)	ENSSMAG00000013901	ENSSMAG00000013908	ENSSMAG00000013920	ENSSMAG00000029734	ENSSMAG00000013937	ENSSMAG00000013974	ENSSMAG00000013984	ENSSMAG00000014071 #22	ENSSMAG00000036175 ##23	ENSSMAG00000014821	ENSSMAG00000014652 ##23	ENSSMAG00000014828	drap1 (ENSSMAG00000014839)	zgc:63470 (ENSSMAG00000014883)	rela (ENSSMAG00000014895)	PP1cb (ENSSMAG00000002193)	ENSSMAG00000002246	ENSSMAG00000031825	ENSSMAG00000018273	slc1a1 (ENSSMAG00000018285)	ENSSMAG00000018348	tspan5a (ENSSMAG00000018453)	ENSSMAG00000018526
Tongue sole	MODERN SPECIES		rbm4.3 (ENSCSEG00000013659)	ENSCSEG00000013661	fxr2 (ENSCSEG00000013667)	haus4 (ENSCSEG00000013680)	dock11 (ENSCSEG00000013702)	ENSCSEG00000013819	ENSCSEG00000013828	kirrel1a (ENSCSEG00000013842)	ENSCSEG00000013886	ENSCSEG00000013894	cskmt (ENSCSEG00000013910)	ENSCSEG00000013920	ENSCSEG00000013935	ENSCSEG00000013940	ALPK1 (ENSCSEG00000013949)	RASGRP2 (ENSCSEG00000013976) #22	ENSCSEG00000014080 ##23	map4k2 (ENSCSEG00000014269)	ENSCSEG00000014355	rbm4.2 (ENSCSEG00000014359)	rbm4.1 (ENSCSEG00000014365)	sf1 (ENSCSEG00000014375) #20	pygmb (ENSCSEG00000014386) #21	ENSCSEG00000014401	zgc:112271 (ENSCSEG00000014405)	slx1b (ENSCSEG00000014411)	ENSCSEG00000014418	ing2 (ENSCSEG00000014428)	rwdd (ENSCSEG00000014432)	men1 (ENSCSEG00000014453) #18	ENSCSEG00000014511
Anabantaria	ANCESTRAL SPECIES	19	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000177832	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT00940000171869.C	ENSGT00940000154521.A	ENSGT00940000157318
Zig-zag eel	MODERN SPECIES	9	ponzr6 (ENSMAMG00000004671)	fxr2 (ENSMAMG00000004616)	ENSMAMG00000004594	dock11 (ENSMAMG00000004465)	ENSMAMG00000004429	ENSMAMG00000004402	kirrel1a (ENSMAMG00000004335)	ndufs2 (ENSMAMG00000027351)	ENSMAMG00000028058	ENSMAMG00000004319	ENSMAMG00000004313	ENSMAMG00000004291	ENSMAMG00000004277	ENSMAMG00000004210	ENSMAMG00000004262	ENSMAMG00000004095 #22	ENSMAMG00000026249	ENSMAMG00000023009	ENSMAMG00000004007 ##23	ENSMAMG00000003965	drap1 (ENSMAMG00000003926)	zgc:63470 (ENSMAMG00000003915)	rela (ENSMAMG00000003875)	ENSMAMG00000024283	ENSMAMG00000003823	ENSMAMG00000028030	ENSMAMG00000025378	S100P (ENSMAMG00000026011)	kiaa0232 (ENSMAMG00000003775)	TBC1D14 (ENSMAMG00000003758)	ENSMAMG00000003751
Anabantoidei	ANCESTRAL SPECIES	22	ENSGT00940000163927.a.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529	ENSGT01090000260120	ENSGT00940000157535.m.a	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a.d	ENSGT00940000164430.a.b.a.c	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT01030000234819	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000177059	ENSGT00940000162871	ENSGT00390000018549	ENSGT00940000157250	ENSGT01100000263482.F	ENSGT00940000154521.A	ENSGT00940000157318
Siamese fighting fish	MODERN SPECIES	10	rbm4.3 (ENSBSLG00000011869)	fxr2 (ENSBSLG00000012107)	haus4 (ENSBSLG00000014997)	dock11 (ENSBSLG00000015449)	ENSBSLG00000018539	ENSBSLG00000018780	kirrel1a (ENSBSLG00000018885)	ndufs2 (ENSBSLG00000019392)	ENSBSLG00000019772	otub1b (ENSBSLG00000019823)	cskmt (ENSBSLG00000019950)	ENSBSLG00000019957	epdl1 (ENSBSLG00000020052)	ENSBSLG00000020156	ALPK1 (ENSBSLG00000020208)	RASGRP2 (ENSBSLG00000021093) #22	ENSBSLG00000021268	ENSBSLG00000021367	NRXN2 (ENSBSLG00000021456) ##23	MAP3K11 (ENSBSLG00000022808)	drap1 (ENSBSLG00000022831)	zgc:63470 (ENSBSLG00000022856)	rela (ENSBSLG00000022881)	ENSBSLG00000022973	ENSBSLG00000023170	ENSBSLG00000023259	ENSBSLG00000023266	S100P (ENSBSLG00000023271)	kiaa0232 (ENSBSLG00000023282)	TBC1D14 (ENSBSLG00000023306)	ENSBSLG00000023590
Climbing perch	MODERN SPECIES	9	fxr2 (ENSATEG00000019423)	ENSATEG00000019439	dock11 (ENSATEG00000019459)	ENSATEG00000019542	ENSATEG00000019557	kirrel1a (ENSATEG00000019566)	ndufs2 (ENSATEG00000019620)	ENSATEG00000019639	ENSATEG00000019650	ENSATEG00000019674	ENSATEG00000019700	ENSATEG00000019719	ENSATEG00000019805	ENSATEG00000019848	ENSATEG00000019838	ENSATEG00000019889 #22	ENSATEG00000019952 ##23	ENSATEG00000019983	ENSATEG00000019991	drap1 (ENSATEG00000020031)	zgc:63470 (ENSATEG00000020036)	rela (ENSATEG00000020042)	ENSATEG00000020081	ENSATEG00000020120	S100P (ENSATEG00000020133)	kiaa0232 (ENSATEG00000020142)	TBC1D14 (ENSATEG00000020180)	ENSATEG00000020260	ENSATEG00000029963	ENSATEG00000020297	ENSATEG00000020313
Pinecone sodierfish	MODERN SPECIES	9	fxr2 (ENSMMDG00005014133)	haus4 (ENSMMDG00005014076)	ENSMMDG00005014075	dock11 (ENSMMDG00005014005)	ENSMMDG00005013979	ENSMMDG00005013969	kirrel1a (ENSMMDG00005013955)	ndufs2 (ENSMMDG00005010958)	ENSMMDG00005010930	ENSMMDG00005010929	otub1b (ENSMMDG00005010923)	cskmt (ENSMMDG00005010922)	epdl1 (ENSMMDG00005010921)	epdl1 (ENSMMDG00005010919)	ENSMMDG00005010914	RASGRP2 (ENSMMDG00005010911) #22	ENSMMDG00005010909 ##23	ENSMMDG00005010908 ##23	ENSMMDG00005010905	MAP3K11 (ENSMMDG00005010901)	drap1 (ENSMMDG00005010899)	zgc:63470 (ENSMMDG00005010895)	rela (ENSMMDG00005010771)	ENSMMDG00005010148	SLC29A2 (ENSMMDG00005010045)	ENSMMDG00005010042	kiaa0232 (ENSMMDG00005010040)	TBC1D14 (ENSMMDG00005009054)	ENSMMDG00005009031	NAT16 (ENSMMDG00005009025)	ENSMMDG00005009018
Cod	MODERN SPECIES	8	hdac8 (ENSGMOG00000019012)	cited1 (ENSGMOG00000033891)	rps4x (ENSGMOG00000019004)	arhgap36 (ENSGMOG00000036826)	ENSGMOG00000013713	rasl11a (ENSGMOG00000013698)	gc2 (ENSGMOG00000013666)	ENSGMOG00000032493	col4a5 (ENSGMOG00000004625)	ENSGMOG00000024150	ankrd46b (ENSGMOG00000026423)	ENSGMOG00000019668	ENSGMOG00000024903	ENSGMOG00000011396	ENSGMOG00000011438	ENSGMOG00000011473 #22	ENSGMOG00000028602	ENSGMOG00000011867 ##23	ENSGMOG00000003592	drap1 (ENSGMOG00000016768)	zgc:63470 (ENSGMOG00000020392)	rela (ENSGMOG00000016783)	ENSGMOG00000014228	ENSGMOG00000014249	ENSGMOG00000018268	ENSGMOG00000018292	ENSGMOG00000023366	ENSGMOG00000029013	ENSGMOG00000026367	ENSGMOG00000028538	ENSGMOG00000028635
Protacanthopterygii	ANCESTRAL SPECIES	57	ENSGT00940000159589	ENSGT00390000005147	ENSGT00600000084617	ENSGT00940000157482.e	ENSGT00390000014237 #18	ENSGT00940000166658.b	ENSGT00940000164485.a.b	ENSGT00940000164485.a.a	ENSGT00940000157258 #20	ENSGT00950000183148.b.a.g.a #21	ENSGT01080000257510	ENSGT00390000006979.a	ENSGT00510000049875	ENSGT00940000164430.a.b.a	ENSGT00940000159753	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01030000234819.c	ENSGT00940000163749	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000164797.b.d	ENSGT00940000153212	ENSGT00940000155803	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000012898
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	638			ENSGT00600000084617.d	ENSGT00940000157482.e.d	ENSGT00390000014237.e #18	ENSGT00940000166658.b.f	ENSGT00940000164485.a.b	ENSGT00940000164485.a.a.b	ENSGT00940000157258.c #20	ENSGT00950000183148.b.a.g.a.a #21	ENSGT01080000257510	ENSGT00390000006979.a.e	ENSGT00940000164430.a.b.a.f	ENSGT01050000244868.c.b.d	ENSGT00940000154826	ENSGT00940000160483.k.b.a #22
Salmoninae_a	ANCESTRAL SPECIES	20	ENSGT00640000091486.a	ENSGT00940000166499	ENSGT01030000234573.B.c.b.b.j	ENSGT00940000159589.e	ENSGT00390000005147.d	ENSGT00600000084617.d	ENSGT00940000157482.e.d	ENSGT00390000014237.e #18	ENSGT00940000166658.b.f	ENSGT00940000164485.a.b	ENSGT00940000164485.a.a.b	ENSGT00940000157258.c #20	ENSGT00950000183148.b.a.g.a.a #21	ENSGT01080000257510	ENSGT00390000006979.a.e	ENSGT00940000160483.k.b.a #22	ENSGT00940000155978.a.a.`d.c.b ##23	ENSGT01030000234819.c	ENSGT00940000155978.a.a.yc.b ##23	ENSGT00940000163749.c.b	ENSGT00940000161064.e	ENSGT00390000012424.a.h	ENSGT00390000011640.g	ENSGT00940000159867.m	ENSGT00940000154644.jb.a.b	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000164797.b.d	ENSGT00940000153212.u	ENSGT00940000161268.i	ENSGT00930000151033.d	ENSGT00940000159305.p
Salmo	ANCESTRAL SPECIES	49	ENSGT01030000234573.B.c.b.b.j	ENSGT00940000159589.e	ENSGT00390000005147.d	ENSGT00600000084617.d	ENSGT00940000157482.e.d	ENSGT00390000014237.e #18	ENSGT00940000166658.b.f	ENSGT00940000164485.a.b	ENSGT00940000164485.a.a.b	ENSGT00940000157258.c #20	ENSGT00950000183148.b.a.g.a.a #21	ENSGT01080000257510	ENSGT00390000006979.a.e	ENSGT00940000164430.a.b.a.f	ENSGT00940000154826	ENSGT00940000160483.k.b.a #22	ENSGT00940000155978.a.a.yc.b ##23	ENSGT00940000161064.e	ENSGT00390000012424.a.h	ENSGT00390000011640.g	ENSGT00940000159867.m	ENSGT00940000154644.jb.a.b	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000164797.b.d	ENSGT00940000153212.u	ENSGT00940000161268.i	ENSGT00930000151033.d	ENSGT00940000159305.p	ENSGT00940000163587.a.b.b.e.b.e	ENSGT00950000183153.c.a.r.e	ENSGT00940000160688.k
Atlantic salmon	MODERN SPECIES	26	ENSSSAG00000110046	ENSSSAG00000040466	cth1 (ENSSSAG00000116914)	mta2 (ENSSSAG00000040519)	ENSSSAG00000041754	ENSSSAG00000045643	ENSSSAG00000045676	ENSSSAG00000045686	map4k2 (ENSSSAG00000045830)	rbm4.2 (ENSSSAG00000002269)	ENSSSAG00000100657	pygmb (ENSSSAG00000002459) #21	ENSSSAG00000002669	ENSSSAG00000002679	ENSSSAG00000002728	ENSSSAG00000002749 #22	ENSSSAG00000080472 ##23	ENSSSAG00000118017	drap1 (ENSSSAG00000084483)	cssa07h11orf68 (ENSSSAG00000003320)	rela (ENSSSAG00000003329)	ENSSSAG00000003352	ENSSSAG00000003437	ENSSSAG00000003456	ENSSSAG00000003463	ENSSSAG00000003469	ENSSSAG00000003493	ENSSSAG00000003660	ENSSSAG00000092063	ENSSSAG00000083890	SLC2A4 (ENSSSAG00000093053)
River trout	MODERN SPECIES	38	cth1 (ENSSTUG00000009105)	mta2 (ENSSTUG00000009123)	EML3 (ENSSTUG00000009613)	ecsit (ENSSTUG00000011798)	ZFTA (ENSSTUG00000011808)	ENSSTUG00000011814	men1 (ENSSTUG00000011843) #18	map4k2 (ENSSTUG00000011910)	rbm4.1 (ENSSTUG00000012314)	sf1 (ENSSTUG00000012346) #20	pygmb (ENSSTUG00000012643) #21	ENSSTUG00000013479	otub1b (ENSSTUG00000013492)	epdl1 (ENSSTUG00000013542)	cst14a.1 (ENSSTUG00000013559)	RASGRP2 (ENSSTUG00000013569) #22	ENSSTUG00000013676	ENSSTUG00000013683	ENSSTUG00000013691 ##23	ENSSTUG00000030538	ENSSTUG00000030566	MAP3K11 (ENSSTUG00000030573)	drap1 (ENSSTUG00000030606)	zgc:63470 (ENSSTUG00000030630)	rela (ENSSTUG00000030641)	ENSSTUG00000030659	SLC29A2 (ENSSTUG00000030750)	ENSSTUG00000030773	ENSSTUG00000030789	ENSSTUG00000030799	ENSSTUG00000030813
Oncorhynchus	ANCESTRAL SPECIES	9	ENSGT00940000166499	ENSGT01030000234573.B.c.b.b.j	ENSGT00940000159589.e	ENSGT00390000005147.d	ENSGT00600000084617.d	ENSGT00940000157482.e.d	ENSGT00390000014237.e #18	ENSGT00940000166658.b.f	ENSGT00940000164485.a.a.b	ENSGT00940000157258.c #20	ENSGT00950000183148.b.a.g.a.a #21	ENSGT01080000257510	ENSGT00390000006979.a.e	ENSGT00940000164430.a.b.a.f	ENSGT00940000154826	ENSGT00940000160483.k.b.a #22	ENSGT00940000155978.a.a.`d.c.b ##23	ENSGT01030000234819.c	ENSGT00940000155978.a.a.yc.b ##23	ENSGT00940000163749.c.b	ENSGT00940000161064.e	ENSGT00390000012424.a.h	ENSGT00390000011640.g	ENSGT00940000159867.m	ENSGT00940000154644.jb.a.b	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000164797.b.d	ENSGT00940000153212.u	ENSGT00940000161268.i	ENSGT00930000151033.d	ENSGT00940000159305.p.b
Rainbow trout	MODERN SPECIES	13	cth1 (ENSOMYG00000015684)	mta2 (ENSOMYG00000037904)	ENSOMYG00000032894	ENSOMYG00000032240	ENSOMYG00000032230	men1 (ENSOMYG00000032204) #18	map4k2 (ENSOMYG00000032177)	ENSOMYG00000032121	ENSOMYG00000031973 #21	ENSOMYG00000031841	ENSOMYG00000031833	ENSOMYG00000031812	ENSOMYG00000059530	ENSOMYG00000062096	ENSOMYG00000059230	ENSOMYG00000031769 #22	ENSOMYG00000075034 ##23	ENSOMYG00000031746	ENSOMYG00000031713	drap1 (ENSOMYG00000031686)	zgc:63470 (ENSOMYG00000031670)	rela (ENSOMYG00000031656)	ENSOMYG00000071951	ENSOMYG00000071733	ENSOMYG00000031631	ENSOMYG00000031618	ENSOMYG00000031600	ENSOMYG00000031498	capgb (ENSOMYG00000031438)	ENSOMYG00000031433	ENSOMYG00000031377
Oncorhynchus_a	ANCESTRAL SPECIES	16	ENSGT00940000166499	ENSGT01030000234573.B.c.b.b.j	ENSGT00940000159589.e	ENSGT00390000005147.d	ENSGT00600000084617.d	ENSGT00940000157482.e.d	ENSGT00390000014237.e #18	ENSGT00940000166658.b.f	ENSGT00940000164485.a.a.b	ENSGT00940000157258.c #20	ENSGT00950000183148.b.a.g.a.a #21	ENSGT01080000257510	ENSGT00390000006979.a.e	ENSGT00940000164430.a.b.a.f	ENSGT00940000154826	ENSGT00940000160483.k.b.a #22	ENSGT00940000155978.a.a.`d.c.b ##23	ENSGT01030000234819.c	ENSGT00940000155978.a.a.yc.b ##23	ENSGT00940000163749.c.b	ENSGT00940000160483.l #22	ENSGT00940000155978.a.a.`d.d ##23	ENSGT00940000161064.e	ENSGT00390000012424.a.h	ENSGT00390000011640.g	ENSGT00940000159867.m	ENSGT00940000154644.jb.a.b	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000164797.b.d	ENSGT00940000153212.u	ENSGT00940000161268.i
Chinook salmon	MODERN SPECIES	6	ENSOTSG00005037953	ENSOTSG00005037952	cth1 (ENSOTSG00005037951)	mta2 (ENSOTSG00005027087)	EML3 (ENSOTSG00005014451)	ecsit (ENSOTSG00005014360)	ZFTA (ENSOTSG00005014357)	ENSOTSG00005014355	men1 (ENSOTSG00005014353) #18	rbm4.1 (ENSOTSG00005014349)	sf1 (ENSOTSG00005014346) #20	ENSOTSG00005014345	otub1b (ENSOTSG00005014343)	ENSOTSG00005014339	cst14a.1 (ENSOTSG00005014337)	RASGRP2 (ENSOTSG00005014285) #22	ENSOTSG00005014283 ##23	ENSOTSG00005014282	ENSOTSG00005014281	NRXN2 (ENSOTSG00005014280) ##23	ENSOTSG00005014274 ##23	ENSOTSG00005014272	drap1 (ENSOTSG00005014271)	zgc:63470 (ENSOTSG00005014270)	rela (ENSOTSG00005014269)	ENSOTSG00005013950	ENSOTSG00005013944	ENSOTSG00005013943	ENSOTSG00005013939	ENSOTSG00005013938	ENSOTSG00005013936
Coho salmon	MODERN SPECIES	29	cth1 (ENSOKIG00005016538)	mta2 (ENSOKIG00005016425)	EML3 (ENSOKIG00005015814)	ENSOKIG00005015712	ENSOKIG00005015701	ENSOKIG00005015664	men1 (ENSOKIG00005015655) #18	map4k2 (ENSOKIG00005015627)	rbm4.1 (ENSOKIG00005015598)	sf1 (ENSOKIG00005015513) #20	pygmb (ENSOKIG00005015349) #21	ENSOKIG00005015291	otub1b (ENSOKIG00005015177)	ENSOKIG00005011189	ENSOKIG00005011176	RASGRP2 (ENSOKIG00005011133) #22	ENSOKIG00005011105 ##23	ENSOKIG00005011099	ENSOKIG00005011086	ENSOKIG00005011013	MAP3K11 (ENSOKIG00005010962)	drap1 (ENSOKIG00005010931)	zgc:63470 (ENSOKIG00005010925)	rela (ENSOKIG00005010910)	ENSOKIG00005010522	ENSOKIG00005010500	SLC29A2 (ENSOKIG00005010490)	ENSOKIG00005010483	ENSOKIG00005010477	POLR2A (ENSOKIG00005010460)	capgb (ENSOKIG00005010439)
Huchen	MODERN SPECIES	3967										sf1 (ENSHHUG00000049792) #20	pygmb (ENSHHUG00000049558) #21	ENSHHUG00000049553	otub1b (ENSHHUG00000049544)	ENSHHUG00000049507	ENSHHUG00000049499	RASGRP2 (ENSHHUG00000049491) #22
Salmoninae	ANCESTRAL SPECIES	570		ENSGT01030000234573.B.c.b.b.i	ENSGT00940000159589.f	ENSGT00390000005147	ENSGT00600000084617.c	ENSGT00940000157482.e.c	ENSGT00390000014237.f #18	ENSGT00940000166658.b.e	ENSGT00940000164485.a.a.a	ENSGT00940000157258.d #20	ENSGT00950000183148.b.a.g.a.b #21	ENSGT00390000006979.a.f	ENSGT00510000049875	ENSGT00940000164430.a.b.a.e	ENSGT00940000159753	ENSGT00940000160483.k.b.b #22	ENSGT00940000155978.a.a.yc.a ##23	ENSGT00940000163749
Huchen	MODERN SPECIES	67	mta2 (ENSHHUG00000023450)	EML3 (ENSHHUG00000024124)	ecsit (ENSHHUG00000025075)	ZFTA (ENSHHUG00000025078)	ENSHHUG00000025086	men1 (ENSHHUG00000025116) #18	map4k2 (ENSHHUG00000025141)	rbm4.1 (ENSHHUG00000025238)	sf1 (ENSHHUG00000025258) #20	pygmb (ENSHHUG00000025287) #21	ENSHHUG00000025446	otub1b (ENSHHUG00000025451)	cskmt (ENSHHUG00000025461)	ENSHHUG00000025467	ALPK1 (ENSHHUG00000025496)	RASGRP2 (ENSHHUG00000025516) #22
Salmoninae_a	ANCESTRAL SPECIES	34		ENSGT01030000234573.B.c.b.b.i	ENSGT00940000159589.f	ENSGT00390000005147.c	ENSGT00600000084617.c	ENSGT00940000157482.e.c	ENSGT00390000014237.f #18	ENSGT00940000166658.b.e	ENSGT00940000164485.a.a.a	ENSGT00940000157258.d #20	ENSGT00950000183148.b.a.g.a.b #21	ENSGT00390000006979.a.f	ENSGT00510000049875	ENSGT00940000164430.a.b.a.e	ENSGT00940000159753	ENSGT00940000160483.k.b.b #22	ENSGT00940000155978.a.a.yc.a ##23	ENSGT00940000163749.c.a	ENSGT00940000161064.f	ENSGT00390000012424.a.g	ENSGT00390000011640.h	ENSGT00940000159867.n	ENSGT00940000154644.jb.a.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154035.a	ENSGT00940000161268.j	ENSGT00930000151033.c	ENSGT00940000159305.o	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00950000183153.c.a.r.f	ENSGT00940000160688.l
Salmo	ANCESTRAL SPECIES	18	ENSGT00940000166499.c	ENSGT01030000234573.B.c.b.b.i	ENSGT00940000159589.f	ENSGT00390000005147.c	ENSGT00600000084617.c	ENSGT00940000157482.e.c	ENSGT00390000014237.f #18	ENSGT00940000166658.b.e	ENSGT00940000164485.a.a.a	ENSGT00940000157258.d #20	ENSGT00950000183148.b.a.g.a.b #21	ENSGT00390000006979.a.f	ENSGT00510000049875	ENSGT00940000164430.a.b.a.e	ENSGT00940000159753	ENSGT00940000160483.k.b.b #22	ENSGT00940000155978.a.a.yc.a ##23	ENSGT00940000163749.c.a	ENSGT00940000161064.f	ENSGT00390000012424.a.g	ENSGT00390000011640.h	ENSGT00940000159867.n.a	ENSGT00940000154644.jb.a.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154035.a	ENSGT00940000161268.j	ENSGT00930000151033.c	ENSGT00940000159305.o	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00950000183153.c.a.r.f	ENSGT00940000160688.l
River trout	MODERN SPECIES	35	taf6l (ENSSTUG00000037768)	mta2 (ENSSTUG00000038004)	EML3 (ENSSTUG00000044484)	ecsit (ENSSTUG00000045002)	ZFTA (ENSSTUG00000045009)	ENSSTUG00000045023	men1 (ENSSTUG00000045053) #18	map4k2 (ENSSTUG00000045144)	rbm4.1 (ENSSTUG00000046013)	sf1 (ENSSTUG00000046027) #20	pygmb (ENSSTUG00000046145) #21	otub1b (ENSSTUG00000046772)	cskmt (ENSSTUG00000046828)	ENSSTUG00000046837	ALPK1 (ENSSTUG00000046864)	RASGRP2 (ENSSTUG00000046926) #22	ENSSTUG00000046951 ##23	NRXN2 (ENSSTUG00000046957) ##23	ENSSTUG00000046980	MAP3K11 (ENSSTUG00000046999)	drap1 (ENSSTUG00000047028)	ENSSTUG00000047046	rela (ENSSTUG00000047072)	rela (ENSSTUG00000047129)	ENSSTUG00000047183	ENSSTUG00000047342	ENSSTUG00000047350	ENSSTUG00000047359	POLR2A (ENSSTUG00000047363)	capgb (ENSSTUG00000047391)	ENSSTUG00000047403
Atlantic salmon	MODERN SPECIES	9	taf6l (ENSSSAG00000078280)	cth1 (ENSSSAG00000078286)	mta2 (ENSSSAG00000107932)	ENSSSAG00000078466	ecsit (ENSSSAG00000080215)	ENSSSAG00000080218	ENSSSAG00000080223	ENSSSAG00000105872	men1 (ENSSSAG00000045698) #18	map4k2 (ENSSSAG00000080268)	ENSSSAG00000080358	ENSSSAG00000080379 #21	ENSSSAG00000080415	ENSSSAG00000080427	ENSSSAG00000080430	rasgrp2 (ENSSSAG00000080445) #22	ENSSSAG00000121366	ENSSSAG00000002870 ##23	ENSSSAG00000091770	ENSSSAG00000103658	drap1 (ENSSSAG00000080557)	zgc:63470 (ENSSSAG00000080559)	ENSSSAG00000080638	rela (ENSSSAG00000080575)	ENSSSAG00000098177	ENSSSAG00000080654	ENSSSAG00000082400	ENSSSAG00000080678	capgb (ENSSSAG00000080701)	ENSSSAG00000003690	ENSSSAG00000110730
Oncorhynchus	ANCESTRAL SPECIES	31	ENSGT01030000234573.B.c.b.b.i	ENSGT00940000159589.f	ENSGT00390000005147.c	ENSGT00600000084617.c	ENSGT00940000157482.e.c	ENSGT00390000014237.f #18	ENSGT00940000166658.b.e	ENSGT00940000164485.a.b	ENSGT00940000164485.a.a.a	ENSGT00940000168082	ENSGT00950000183148.b.a.g.a.b #21	ENSGT00390000006979.a.f	ENSGT00510000049875	ENSGT00940000164430.a.b.a.e	ENSGT00940000159753	ENSGT00940000160483.k.b.b #22	ENSGT00940000155978.a.a.yc.a ##23	ENSGT00940000163749.c.a	ENSGT00940000161064.f	ENSGT00390000012424.a.g	ENSGT00390000011640.h	ENSGT00940000159867.n	ENSGT00940000154644.jb.a.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154035.a	ENSGT00940000161268.j	ENSGT00930000151033.c	ENSGT00940000159305.o	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00950000183153.c.a.r.f	ENSGT00940000160688.l
Rainbow trout	MODERN SPECIES	30	ecsit (ENSOMYG00000001668)	ENSOMYG00000001624	ENSOMYG00000001581	men1 (ENSOMYG00000001453) #18	ENSOMYG00000057330	map4k2 (ENSOMYG00000011094)	rbm4.2 (ENSOMYG00000010788)	ENSOMYG00000010778	pygmb (ENSOMYG00000010287) #21	ENSOMYG00000009840	ENSOMYG00000009824	ENSOMYG00000009788	ENSOMYG00000069818	ENSOMYG00000009699	ENSOMYG00000060030	ENSOMYG00000009455 #22	ENSOMYG00000074905	ENSOMYG00000077566 ##23	ENSOMYG00000063662	ENSOMYG00000009395	ENSOMYG00000074351	ENSOMYG00000009350	drap1 (ENSOMYG00000009261)	zgc:63470 (ENSOMYG00000009212)	rela (ENSOMYG00000009183)	ENSOMYG00000008999	ENSOMYG00000068872	ENSOMYG00000008807	ENSOMYG00000060402	ENSOMYG00000008724	ENSOMYG00000062841
Oncorhynchus_a	ANCESTRAL SPECIES	30	ENSGT01030000234573.B.c.b.b.i	ENSGT00940000159589.f	ENSGT00390000005147.c	ENSGT00600000084617.c	ENSGT00940000157482.e.c	ENSGT00390000014237.f #18	ENSGT00940000166658.b.e	ENSGT00940000164485.a.a.a	ENSGT00940000167937	ENSGT00940000168082	ENSGT00950000183148.b.a.g.a.b #21	ENSGT00390000006979.a.f	ENSGT00510000049875	ENSGT00940000164430.a.b.a.e	ENSGT00940000159753	ENSGT00940000160483.k.b.b #22	ENSGT00940000155978.a.a.yc.a ##23	ENSGT00940000163749.c.a	ENSGT00940000161064.f	ENSGT00390000012424.a.g	ENSGT01000000221816	ENSGT00940000159867.n	ENSGT00940000154644.jb.a.a	ENSGT00950000182898.a.a.a.a.a.g.j.b	ENSGT00940000154035.a	ENSGT00940000161268.j	ENSGT00930000151033.c	ENSGT00940000159305.o	ENSGT00940000163587.a.b.b.e.b.f	ENSGT00950000183153.c.a.r.f	ENSGT00940000160688.l
Coho salmon	MODERN SPECIES	7	ENSOKIG00005038035	mta2 (ENSOKIG00005037542)	EML3 (ENSOKIG00005030734)	ecsit (ENSOKIG00005030280)	ENSOKIG00005030261	ENSOKIG00005030207	men1 (ENSOKIG00005030145) #18	map4k2 (ENSOKIG00005029988)	ENSOKIG00005029937	ENSOKIG00005029844	PYGM (ENSOKIG00005029655) #21	OTUB1 (ENSOKIG00005029576)	cskmt (ENSOKIG00005029568)	ENSOKIG00005029556	ALPK1 (ENSOKIG00005029538)	RASGRP2 (ENSOKIG00005029448) #22	ENSOKIG00005029426	ENSOKIG00005029415 ##23	ENSOKIG00005029395	ENSOKIG00005029389	MAP3K11 (ENSOKIG00005029344)	drap1 (ENSOKIG00005029318)	ENSOKIG00005029306	rela (ENSOKIG00005029154)	ENSOKIG00005029040	ENSOKIG00005028957	ENSOKIG00005028931	ENSOKIG00005028922	POLR2A (ENSOKIG00005028872)	capgb (ENSOKIG00005028821)	ENSOKIG00005028809
Chinook salmon	MODERN SPECIES	1	taf6l (ENSOTSG00005017433)	mta2 (ENSOTSG00005017375)	EML3 (ENSOTSG00005008826)	ecsit (ENSOTSG00005008791)	ZFTA (ENSOTSG00005008789)	ENSOTSG00005008772	men1 (ENSOTSG00005008770) #18	map4k2 (ENSOTSG00005008483)	rbm4.1 (ENSOTSG00005008480)	ENSOTSG00005008479	pygmb (ENSOTSG00005008439) #21	otub1b (ENSOTSG00005008424)	cskmt (ENSOTSG00005008421)	epdl1 (ENSOTSG00005008390)	ALPK1 (ENSOTSG00005008385)	RASGRP2 (ENSOTSG00005008378) #22	ENSOTSG00005008375 ##23	NRXN2 (ENSOTSG00005008292) ##23	ENSOTSG00005008284	ENSOTSG00005008281	ENSOTSG00005008280 ##23	MAP3K11 (ENSOTSG00005008279)	drap1 (ENSOTSG00005008277)	ENSOTSG00005008276	rela (ENSOTSG00005008273)	ENSOTSG00005007001	SLC29A2 (ENSOTSG00005006998)	ENSOTSG00005006996	ENSOTSG00005006995	POLR2A (ENSOTSG00005006991)	capgb (ENSOTSG00005006989)
Northern pike	MODERN SPECIES	23	mta2 (ENSELUG00000012856)	ecsit (ENSELUG00000000475)	ZFTA (ENSELUG00000013015)	ENSELUG00000013044	men1 (ENSELUG00000013101) #18	map4k2 (ENSELUG00000013174)	rbm4.2 (ENSELUG00000030301)	rbm4.1 (ENSELUG00000013205)	sf1 (ENSELUG00000013225) #20	pygmb (ENSELUG00000013289) #21	ENSELUG00000013310	otub1 (ENSELUG00000013376)	cskmt (ENSELUG00000013394)	ENSELUG00000013408	ALPK1 (ENSELUG00000013554)	RASGRP2 (ENSELUG00000000505) #22	NRXN2 (ENSELUG00000013764) ##23	ENSELUG00000013710	MAP3K11 (ENSELUG00000013820)	drap1 (ENSELUG00000013878)	zgc:63470 (ENSELUG00000013893)	rela (ENSELUG00000013915)	ENSELUG00000013965	SLC29A2 (ENSELUG00000014061)	ENSELUG00000034692	ugt2a5 (ENSELUG00000000516)	ENSELUG00000014170	ENSELUG00000014212	POLR2A (ENSELUG00000014284)	capgb (ENSELUG00000014302)	ENSELUG00000014343
Otomorpha	ANCESTRAL SPECIES	506																ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.a	ENSGT00950000182898.a.a.a.a.a.g
Clupeiformes	ANCESTRAL SPECIES	399							ENSGT00890000139482.a	ENSGT00550000074944	ENSGT00940000158006	ENSGT00950000182916.a.b.a.b	ENSGT00390000008787.a	ENSGT00940000156306	ENSGT00530000063652.a.a	ENSGT00900000140979.a.a	ENSGT00940000157535.m.a	ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT01090000260186
Atlantic herring	MODERN SPECIES	9	PEA15 (ENSCHAG00000015946)	ENSCHAG00000015964	ENSCHAG00000015978	ENSCHAG00000015984	ENSCHAG00000016029	ENSCHAG00000016070	ENSCHAG00000016075	tdrd7b (ENSCHAG00000016110)	plaa (ENSCHAG00000016260)	zdhhc21 (ENSCHAG00000016598)	NFIB (ENSCHAG00000016612)	PPP3CA (ENSCHAG00000001172)	DDIT4L (ENSCHAG00000002255)	H2AZ1 (ENSCHAG00000002270)	ENSCHAG00000002410	RASGRP2 (ENSCHAG00000002534) #22	ENSCHAG00000003065 ##23	ENSCHAG00000003097	NRXN2 (ENSCHAG00000003236) ##23	ENSCHAG00000006527	ENSCHAG00000006540	ENSCHAG00000006560	ENSCHAG00000006594	ENSCHAG00000006621	ENSCHAG00000006663	ENSCHAG00000006671	kirrel1a (ENSCHAG00000006715)	ndufs2 (ENSCHAG00000007869)	hacd4 (ENSCHAG00000010111)	ENSCHAG00000010170	mllt3 (ENSCHAG00000011337)
Denticle herring	MODERN SPECIES		ostc (ENSDCDG00000030602)	rpl34 (ENSDCDG00000030603)	trmt44 (ENSDCDG00000030606)	GPR78 (ENSDCDG00000030610)	CPZ (ENSDCDG00000030611)	HMX1 (ENSDCDG00000030613)	tdrd7b (ENSDCDG00000030623)	plaa (ENSDCDG00000030671)	zdhhc21 (ENSDCDG00000030694)	NFIB (ENSDCDG00000030705)	BANK1 (ENSDCDG00000030753)	PPP3CA (ENSDCDG00000030774)	DDIT4L (ENSDCDG00000031026)	H2AZ1 (ENSDCDG00000031029)	ENSDCDG00000031038	RASGRP2 (ENSDCDG00000031048) #22	NRXN2 (ENSDCDG00000031126) ##23	ENSDCDG00000031305	SLC24A2 (ENSDCDG00000031308)	ENSDCDG00000031359	ENSDCDG00000031441	ENSDCDG00000031443	ENSDCDG00000031518	MPDZ (ENSDCDG00000034214)	LURAP1L (ENSDCDG00000034558)	TYRP1 (ENSDCDG00000034559)	PTPRD (ENSDCDG00000034628)	ENSDCDG00000003979	CAAP1 (ENSDCDG00000003981)	SHPRH (ENSDCDG00000004007)	elavl2 (ENSDCDG00000004298)
Otophysi	ANCESTRAL SPECIES	9																ENSGT00940000160483.k.b #22	ENSGT00940000155978.a.a ##23	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000159796.a.b	ENSGT01070000253822.D.b	ENSGT00980000198603.A	ENSGT00540000073610.B	ENSGT00940000155378.c.b	ENSGT00940000164430.a.b.a	ENSGT00940000159753	ENSGT01040000240385.B	ENSGT00940000164991.a.a	ENSGT00940000160206.e
Characiphysae	ANCESTRAL SPECIES	58	ENSGT00390000006970	ENSGT01100000263644	ENSGT00390000018123.a.b	ENSGT00940000159445	ENSGT00940000161519	ENSGT00940000160206.e	ENSGT00940000164991.a.a	ENSGT01040000240385.B	ENSGT00940000161707.a.b	ENSGT00390000015386.b	ENSGT00940000159778.a	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000160483.k.b #22	ENSGT00940000163149.b.c.b.b.a.a.a	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749.a.a	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.b.g.b	ENSGT00530000063790.b	ENSGT00940000155804.k.a	ENSGT00940000153617.B	ENSGT01060000248862	ENSGT00390000017010	ENSGT00940000156823.e
Channel catfish	MODERN SPECIES	21	ENSIPUG00000009996	ENSIPUG00000010064	ENSIPUG00000010080	ENSIPUG00000010092	ENSIPUG00000010122	ENSIPUG00000010145	ENSIPUG00000010152	adra2c (ENSIPUG00000010180)	DOK7 (ENSIPUG00000010189)	hgfac (ENSIPUG00000010221)	ENSIPUG00000010251	adgrl3 (ENSIPUG00000010583)	MPDZ (ENSIPUG00000011101)	SLC29A2 (ENSIPUG00000011173)	SLC29A2 (ENSIPUG00000011209)	RASGRP2 (ENSIPUG00000011247) #22	crgm2 (ENSIPUG00000011305)	ENSIPUG00000011337 ##23	NRXN2 (ENSIPUG00000011361) ##23	ENSIPUG00000011439	ENSIPUG00000011448	ENSIPUG00000011460	MAP3K11 (ENSIPUG00000011483)	drap1 (ENSIPUG00000011518)	zgc:63470 (ENSIPUG00000011545)	rela (ENSIPUG00000011563)	pp1b (ENSIPUG00000011678)	lurap1l (ENSIPUG00000011753)	TYRP1 (ENSIPUG00000011768)	ENSIPUG00000011825	ENSIPUG00000011842
Characiphysae_b	ANCESTRAL SPECIES	148									ENSGT00940000161707.a.b	ENSGT00390000015386.b	ENSGT00940000159778.a	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000160483.k.b #22	ENSGT00940000163149.b.c.b.b.a.a.a	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749.a.a	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.b.g.b	ENSGT00530000063790.b	ENSGT00940000155804.k.a	ENSGT00940000153617.B	ENSGT01060000248862	ENSGT00390000017010	ENSGT00940000156823.e
Characoidei	ANCESTRAL SPECIES	168									ENSGT00940000161707.a.b	ENSGT00390000015386.b	ENSGT00940000159778.a	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000160483.k.b #22	ENSGT00940000163149.b.c.b.b.a.a.a	ENSGT00940000155978.a.a ##23	ENSGT01030000234819	ENSGT00940000163749.a.a	ENSGT00940000161064	ENSGT00390000012424.a	ENSGT00390000011640	ENSGT00940000159867	ENSGT00940000154644.jb.b.g.b	ENSGT00530000063790.b	ENSGT00940000155804.k.a	ENSGT00940000153617.B	ENSGT01060000248862	ENSGT00390000017010	ENSGT00940000156823.e
Red-bellied piranha	MODERN SPECIES	51				SLC44A1 (ENSPNAG00000016046)	aptx (ENSPNAG00000015984)	ENSPNAG00000015957	ADRA2C (ENSPNAG00000015848)	DOK7 (ENSPNAG00000015834)	HGFAC (ENSPNAG00000015800)	ENSPNAG00000015779	ADGRL3 (ENSPNAG00000015641)	ENSPNAG00000015457	ENSPNAG00000015448	MPDZ (ENSPNAG00000015412)	ENSPNAG00000015310	RASGRP2 (ENSPNAG00000015291) #22	ENSPNAG00000015200 ##23	NRXN2 (ENSPNAG00000015184) ##23	ENSPNAG00000003345	ENSPNAG00000015026	MAP3K11 (ENSPNAG00000015016)	drap1 (ENSPNAG00000015008)	zgc:63470 (ENSPNAG00000014971)	rela (ENSPNAG00000005984)	ppp1cb (ENSPNAG00000014924)	LURAP1L (ENSPNAG00000014904)	TYRP1 (ENSPNAG00000014893)	ENSPNAG00000003307	ENSPNAG00000014870	MED9 (ENSPNAG00000003299)	PTPRD (ENSPNAG00000003278)
Mexicana tetra	MODERN SPECIES	13	ltb4r2a (ENSAMXG00000029069)	ltb4r (ENSAMXG00000030787)	SLC24A2 (ENSAMXG00000021601)	ENSAMXG00000031293	ENSAMXG00000042568	ADRA2C (ENSAMXG00000025266)	DOK7 (ENSAMXG00000021597)	HGFAC (ENSAMXG00000021594)	ENSAMXG00000031940	ENSAMXG00000021540	ENSAMXG00000030987	ENSAMXG00000035435	ADGRL3 (ENSAMXG00000021273)	MPDZ (ENSAMXG00000021159)	ENSAMXG00000020980	RASGRP2 (ENSAMXG00000020940) #22	ENSAMXG00000041855	ENSAMXG00000040772	ENSAMXG00000025265 ##23	ENSAMXG00000031515 ##23	ENSAMXG00000031439	ENSAMXG00000039087	ENSAMXG00000036963	ENSAMXG00000020741	PNPT1 (ENSAMXG00000042321)	PPP4R3C (ENSAMXG00000020618)	CCDC88A (ENSAMXG00000020481)	prorsd1 (ENSAMXG00000025264)	ppp1r21 (ENSAMXG00000020345)	ENSAMXG00000040046	ENSAMXG00000042185
Electric eel	MODERN SPECIES	1025														MPDZ (ENSEEEG00000011153)	SLC29A2 (ENSEEEG00000011152)	ENSEEEG00000011151 #22
Cyprinoidei	ANCESTRAL SPECIES	41	ENSGT00940000155586.B	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000157089.B	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b	ENSGT00940000157468.a.a.a	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000156076.b	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000177923	ENSGT00940000163235.A.a.b	ENSGT00940000162219.x	ENSGT00390000013104	ENSGT00390000013315	ENSGT00940000160483.k.b #22	ENSGT00940000160644	ENSGT00390000004147	ENSGT00940000158287	ENSGT00950000182837.a.b.a	ENSGT00940000155370	ENSGT00940000155458.f	ENSGT00940000153607.b	ENSGT00940000154982.c	ENSGT01030000234633.B.a.c	ENSGT00390000006950	ENSGT00390000016237	ENSGT00950000183154.b.a.b	ENSGT00390000014786	ENSGT00730000110920.b.a.b.b	ENSGT00940000153289.a.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	188															ENSGT00390000013315.a.b	ENSGT00940000160483.k.b.c #22	ENSGT00940000160644.c	ENSGT01030000234532.A.a.a.a.a.a.b	ENSGT00940000160644.d	ENSGT01030000234532.A.a.a.a.a.a.a.a	ENSGT01090000260061.c.b.ud	ENSGT00390000004147.h	ENSGT00940000158287	ENSGT00950000182837.a.b.a.o.a	ENSGT00950000182837.a.b.a.o.b	ENSGT00940000155370	ENSGT00940000155458.f	ENSGT00940000154982.c.d	ENSGT01030000234633.B.a.c.d	ENSGT00390000006950.l	ENSGT00940000153607.b
Goldfish	MODERN SPECIES	25	ENSCARG00000036359	ENSCARG00000036325	DOK7 (ENSCARG00000036310)	ENSCARG00000036201	ENSCARG00000036171	ADGRL3 (ENSCARG00000034602)	MPDZ (ENSCARG00000029634)	ENSCARG00000029360	MAPK8IP1 (ENSCARG00000029315)	HECTD4 (ENSCARG00000028420)	ENSCARG00000028369	RPH3A (ENSCARG00000028220)	ENSCARG00000028141	tollip (ENSCARG00000028096)	slc35c1 (ENSCARG00000028088)	RASGRP2 (ENSCARG00000027971) #22	SIPA1 (ENSCARG00000027900)	ENSCARG00000027850	ywhae2 (ENSCARG00000027749)	psmd9 (ENSCARG00000027725)	lrp4 (ENSCARG00000026352)	cacnb2a (ENSCARG00000022899)	ENSCARG00000022801	SMCHD1 (ENSCARG00000022493)	METTL4 (ENSCARG00000022455)	adcyap1a (ENSCARG00000022450)	ppp1r15a (ENSCARG00000022446)	ENSCARG00000022435	ENSCARG00000022429	ACO1 (ENSCARG00000022132)	ENSCARG00000022114
Cyprininae_a	ANCESTRAL SPECIES	358							ENSGT00940000156076.a.a.a.a.c	ENSGT00940000156076.b	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000177923	ENSGT01040000240558.a	ENSGT00390000013104.c	ENSGT00940000162219.x	ENSGT00390000013104.d.a	ENSGT00390000013315.a.b	ENSGT00940000160483.k.b.c #22	ENSGT00940000160644.c	ENSGT01030000234532.A.a.a.a.a.a.b	ENSGT01030000234532.A.a.a.a.a.a.a.a	ENSGT01090000260061.c.b.ud.c.a	ENSGT00390000004147.h	ENSGT00940000158287.a	ENSGT00950000182837.a.b.a.o.b	ENSGT00940000153607.b	ENSGT00940000154982.c.c	ENSGT01030000234633.B.a.c.c	ENSGT00390000006950.k	ENSGT00390000016237	ENSGT00950000183154.b.a.b	ENSGT00390000014786	ENSGT00730000110920.b.a.b.b.a.b
Golden-line barbel	MODERN SPECIES	389	ENSSGRG00000032468	ENSSGRG00000032477	ENSSGRG00000032489	MAPK8IP1 (ENSSGRG00000032571)	ENSSGRG00000032592	ENSSGRG00000032596	ENSSGRG00000032598	ENSSGRG00000032601	ENSSGRG00000032604	ENSSGRG00000032607	ENSSGRG00000032611	tollip (ENSSGRG00000032618)	TOLLIP (ENSSGRG00000032653)	ENSSGRG00000032654	slc35c1 (ENSSGRG00000032655)	RASGRP2 (ENSSGRG00000032656) #22	ENSSGRG00000032658	ENSSGRG00000032659	ywhae2 (ENSSGRG00000032713)	psmd9 (ENSSGRG00000032738)	lrp4 (ENSSGRG00000032739)
Common carp reference	MODERN SPECIES	6	ENSCCRG00000054764	ENSCCRG00000077346	ENSCCRG00000043081	ENSCCRG00000043098	ENSCCRG00000045044	ENSCCRG00000071847	ENSCCRG00000066362	ENSCCRG00000080579	ENSCCRG00000080446	ENSCCRG00000001161	ENSCCRG00000061890	ENSCCRG00000041593	ENSCCRG00000077788	tollip (ENSCCRG00000066323)	slc35c1 (ENSCCRG00000066984)	ENSCCRG00000069042 #22	ENSCCRG00000057719	ENSCCRG00000061648	ywhae2 (ENSCCRG00000065575)	psmd9 (ENSCCRG00000081299)	lrp4 (ENSCCRG00000015632)	cacnb2a (ENSCCRG00000011606)	myl12.1 (ENSCCRG00000067896)	MYOM1 (ENSCCRG00000044950)	EMILIN2 (ENSCCRG00000044568)	SMCHD1 (ENSCCRG00000033743)	ENSCCRG00000076711	ENSCCRG00000071654	METTL4 (ENSCCRG00000026868)	adcyap1a (ENSCCRG00000032905)	tyms (ENSCCRG00000081381)
Cyprininae	ANCESTRAL SPECIES	290	ENSGT00940000157089.B	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b.a.b	ENSGT00940000157468.a.a.a.e	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000156076.b	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000177923	ENSGT01040000240558.a	ENSGT00940000164871.b.e.b.a	ENSGT00940000163235.E	ENSGT00940000162219.x	ENSGT00390000013104	ENSGT00390000013315.a.a	ENSGT00940000160483.k.b.d #22
Goldfish	MODERN SPECIES	47	ENSCARG00000039427	ENSCARG00000039440	ENSCARG00000039445	ENSCARG00000039467	ENSCARG00000039474	mrpl21 (ENSCARG00000039552)	HECTD4 (ENSCARG00000039804)	ENSCARG00000044376	ENSCARG00000044435	ENSCARG00000044608	ENSCARG00000044632	ENSCARG00000044646	ENSCARG00000044658	tollip (ENSCARG00000044691)	slc35c1 (ENSCARG00000044803)	RASGRP2 (ENSCARG00000044820) #22	ENSCARG00000045529	ywhae2 (ENSCARG00000045609)	psmd9 (ENSCARG00000045701)	lrp4 (ENSCARG00000045769)	cacnb2a (ENSCARG00000047584)	ENSCARG00000054374	ENSCARG00000054524	myl12.1 (ENSCARG00000054533)	MYOM1 (ENSCARG00000054786)	ENSCARG00000060513	SMCHD1 (ENSCARG00000060669)	adcyap1a (ENSCARG00000062847)	tyms (ENSCARG00000062865)	ACER2 (ENSCARG00000062899)	ppp1r15a (ENSCARG00000062920)
Cyprininae_a	ANCESTRAL SPECIES	141	ENSGT00940000159778.a.b	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B.e.a	ENSGT00940000156348.B.n	ENSGT00940000155586.B.f	ENSGT00950000182898.a.a.a.a.a.g.f	ENSGT00950000182898.a.a.a.a.a.g.e	ENSGT00940000157089.B	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b.a.a	ENSGT00940000157468.a.a.a.f	ENSGT00390000013104.d.b	ENSGT00390000013315.a.a	ENSGT00940000160483.k.b.d #22	ENSGT00940000160644.d	ENSGT01030000234532.A.a.a.a.a.a.a.b	ENSGT01090000260061.c.b.ud.c.b	ENSGT00390000004147.g	ENSGT00940000158287.b	ENSGT00950000182837.a.b.a.o.a	ENSGT00940000155370	ENSGT00940000155458.f	ENSGT00940000154982.c.d	ENSGT01030000234633.B.a.c.d	ENSGT00390000006950.l	ENSGT00730000110920.b.a.b.b.a.a	ENSGT00940000154404.b.i.a	ENSGT00940000153289.a.a.b.a	ENSGT00940000153289.a.a.b.b
Golden-line barbel	MODERN SPECIES	299									ENSSGRG00000031082	ENSSGRG00000031079	ENSSGRG00000031076	ENSSGRG00000031074	ENSSGRG00000031072	tollip (ENSSGRG00000031069)	slc35c1 (ENSSGRG00000031067)	RASGRP2 (ENSSGRG00000031059) #22	SIPA1 (ENSSGRG00000030902)	ENSSGRG00000030900	lrp4 (ENSSGRG00000030740)	ENSSGRG00000030735	ENSSGRG00000030733	ENSSGRG00000030728	myl12.1 (ENSSGRG00000030663)	MYOM1 (ENSSGRG00000030320)	ENSSGRG00000030310	SMCHD1 (ENSSGRG00000030256)	adcyap1a (ENSSGRG00000030240)	adcyap1a (ENSSGRG00000030233)	ENSSGRG00000030231	ppp1r15a (ENSSGRG00000030230)	ENSSGRG00000030229
Common carp reference	MODERN SPECIES		ENSCCRG00000082189	ENSCCRG00000056466	ENSCCRG00000075826	ENSCCRG00000080023	ENSCCRG00000081606	ENSCCRG00000063445	ENSCCRG00000061685	mrpl21 (ENSCCRG00000000488)	ENSCCRG00000073285	ENSCCRG00000074248	ENSCCRG00000082617	ENSCCRG00000071859	ENSCCRG00000056257	tollip (ENSCCRG00000020513)	slc35c1 (ENSCCRG00000067739)	ENSCCRG00000075515 #22	ENSCCRG00000040406	ENSCCRG00000003971	ywhae2 (ENSCCRG00000061887)	psmd9 (ENSCCRG00000003936)	lrp4 (ENSCCRG00000016152)	cacnb2a (ENSCCRG00000054723)	ENSCCRG00000054700	myl12.1 (ENSCCRG00000029974)	MYOM1 (ENSCCRG00000044425)	ENSCCRG00000040510	SMCHD1 (ENSCCRG00000044629)	tyms (ENSCCRG00000048229)	ENSCCRG00000064784	ppp1r15a (ENSCCRG00000081796)	ENSCCRG00000016546
Zebrafish	MODERN SPECIES	22	ENSDARG00000105782	ENSDARG00000105714	ADGRL3 (ENSDARG00000090624)	ENSDARG00000099078	MAPK8IP1 (ENSDARG00000090326)	mrpl21 (ENSDARG00000003846)	HECTD4 (ENSDARG00000101079)	ENSDARG00000098989	ENSDARG00000105490	ENSDARG00000109688	ENSDARG00000104914	ENSDARG00000099470	tollip (ENSDARG00000098486)	slc35c1 (ENSDARG00000104669)	ENSDARG00000102247	RASGRP2 (ENSDARG00000099092) #22	SIPA1 (ENSDARG00000076697)	ENSDARG00000041086	ywhae2 (ENSDARG00000017014)	psmd9 (ENSDARG00000006300)	lrp4 (ENSDARG00000116353)	ENSDARG00000116356	cacnb2a (ENSDARG00000099045)	NSUN6 (ENSDARG00000103478)	myl12.1 (ENSDARG00000099766)	MYOM1 (ENSDARG00000104836)	ENSDARG00000102178	SMCHD1 (ENSDARG00000104374)	METTL4 (ENSDARG00000088999)	adcyap1a (ENSDARG00000004015)	tyms (ENSDARG00000042894)
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000160483.k.b #22
P. kingsleyae	MODERN SPECIES	230											ENSPKIG00000006845	zgc:152774 (ENSPKIG00000006862)	pmt (ENSPKIG00000006894)	rbm4.3 (ENSPKIG00000007001)	ENSPKIG00000007024	RASGRP2 (ENSPKIG00000007043) #22	ENSPKIG00000007075	ENSPKIG00000007089	ENSPKIG00000007105 ##23	NRXN2 (ENSPKIG00000007201) ##23	ENSPKIG00000007374	MAP3K11 (ENSPKIG00000007405)	drap1 (ENSPKIG00000007478)	zgc:63470 (ENSPKIG00000007550)	ENSPKIG00000007574
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000160483.l #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000160483.l #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000160483.l #22
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000160483.l #22
Salmoninae	ANCESTRAL SPECIES	737																ENSGT00940000160483.l #22	ENSGT00940000155978.a.a.`d ##23	ENSGT01030000234819.c	ENSGT00940000155978.a.a.yc.b ##23	ENSGT00940000161064.e	ENSGT00390000012424.a.h	ENSGT00390000011640.g	ENSGT00940000159867.m	ENSGT00940000154644.jb.a.b	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000164797.b.d
Salmoninae_a	ANCESTRAL SPECIES	984																ENSGT00940000160483.l #22	ENSGT00940000155978.a.a.`d.d ##23
Oncorhynchus	ANCESTRAL SPECIES	824																ENSGT00940000160483.l #22	ENSGT00940000155978.a.a.`d.d ##23
Oncorhynchus_a	ANCESTRAL SPECIES	16	ENSGT00940000157482.e.d	ENSGT00390000014237.e #18	ENSGT00940000166658.b.f	ENSGT00940000164485.a.a.b	ENSGT00940000157258.c #20	ENSGT00950000183148.b.a.g.a.a #21	ENSGT01080000257510	ENSGT00390000006979.a.e	ENSGT00940000164430.a.b.a.f	ENSGT00940000154826	ENSGT00940000160483.k.b.a #22	ENSGT00940000155978.a.a.`d.c.b ##23	ENSGT01030000234819.c	ENSGT00940000155978.a.a.yc.b ##23	ENSGT00940000163749.c.b	ENSGT00940000160483.l #22	ENSGT00940000155978.a.a.`d.d ##23	ENSGT00940000161064.e	ENSGT00390000012424.a.h	ENSGT00390000011640.g	ENSGT00940000159867.m	ENSGT00940000154644.jb.a.b	ENSGT00950000182898.a.a.a.a.a.g.j.a	ENSGT00940000164797.b.d	ENSGT00940000153212.u	ENSGT00940000161268.i	ENSGT00980000203069	ENSGT00930000151033.d	ENSGT00940000159305.p.b	ENSGT00940000163587.a.b.b.e.b.e	ENSGT00940000168324.c.a
Chinook salmon	MODERN SPECIES	23	ZIC3 (ENSOTSG00005026519)	htatsf1 (ENSOTSG00005026520)	ENSOTSG00005026524	snx12 (ENSOTSG00005026528)	slc7a3a (ENSOTSG00005026530)	RAB39B (ENSOTSG00005002686)	ENSOTSG00005002789	ENSOTSG00005002934	ENSOTSG00005003167	CLCN5 (ENSOTSG00005011392)	ENSOTSG00005011395	puraa (ENSOTSG00005011397)	nrg2a (ENSOTSG00005011398)	ENSOTSG00005011408	pygma (ENSOTSG00005011413) #21	ENSOTSG00005012075 #22	ENSOTSG00005012079 ##23	FIS1 (ENSOTSG00005012080)	ENSOTSG00005012082	ENSOTSG00005012083	SPNS2 (ENSOTSG00005012084)	ruvbl2 (ENSOTSG00005012124)	ftr83 (ENSOTSG00005012126)	ftr82 (ENSOTSG00005012128)	ift22 (ENSOTSG00005012130)	atp5l (ENSOTSG00005012131)	ENSOTSG00005012132	ABCG4 (ENSOTSG00005012133)	hinfp (ENSOTSG00005012176)	dpagt1 (ENSOTSG00005012179)	c2cd2l (ENSOTSG00005012180)