Gnathostomata	ANCESTRAL SPECIES	703																ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20
Euteleostomi	ANCESTRAL SPECIES	283									ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18
Sarcopterygii	ANCESTRAL SPECIES	47		ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00940000161330	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.b #17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Tetrapoda	ANCESTRAL SPECIES	29	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00940000161330	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.d ##17	ENSGT00390000014165.c.b #17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10
Amniota	ANCESTRAL SPECIES	17	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00940000161330	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00390000014165.c.b #17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10
Mammalia	ANCESTRAL SPECIES	32																ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00390000014165.c.b #17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10
Theria	ANCESTRAL SPECIES	18	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00390000014165.c.a.a ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Primates	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00940000163300	ENSGT00390000014165.c.a.a.h.g ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172 #24	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b.j ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172 #24	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00620000089286	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835
Rhinopithecus	ANCESTRAL SPECIES	118	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b.i.a #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172 #24	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00620000089286	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835
Black snub-nosed monkey	MODERN SPECIES	1977				ENSRBIG00000028275 #10	BOD1 (ENSRBIG00000027366) #11	STC2 (ENSRBIG00000042135) #12	NKX2-5 (ENSRBIG00000007305) #13	BNIP1 (ENSRBIG00000024422) #14	CREBRF (ENSRBIG00000041000) #15	ATP6V0E1 (ENSRBIG00000000223) #16	RPL26L1 (ENSRBIG00000029430) #17	ERGIC1 (ENSRBIG00000032953) #18	DUSP1 (ENSRBIG00000037066) #19	NEURL1B (ENSRBIG00000037294) #20	SH3PXD2B (ENSRBIG00000036914) #21	UBTD2 (ENSRBIG00000037359) #22	EFCAB9 (ENSRBIG00000031355) #23	ENSRBIG00000030762 #24	STK10 (ENSRBIG00000037834) #25
Golden snub-nosed monkey	MODERN SPECIES	1733	ENSRROG00000040238	C5orf47 (ENSRROG00000008119)	NSG2 (ENSRROG00000032380)	CPEB4 (ENSRROG00000029196) #10	BOD1 (ENSRROG00000039526) #11	STC2 (ENSRROG00000030679) #12	NKX2-5 (ENSRROG00000043318) #13	BNIP1 (ENSRROG00000035092) #14	CREBRF (ENSRROG00000041689) #15	ATP6V0E1 (ENSRROG00000035355) #16	ENSRROG00000034464 #17	ERGIC1 (ENSRROG00000031072) #18	DUSP1 (ENSRROG00000027680) #19	NEURL1B (ENSRROG00000043630) #20	SH3PXD2B (ENSRROG00000038290) #21	UBTD2 (ENSRROG00000038688) #22	EFCAB9 (ENSRROG00000001287) #23	ENSRROG00000039795 #24	STK10 (ENSRROG00000043810) #25	FBXW11 (ENSRROG00000042640)	SMIM23 (ENSRROG00000037550)	ENSRROG00000031061	FGF18 (ENSRROG00000044210)	NPM1 (ENSRROG00000045149)	TLX3 (ENSRROG00000034639)	ENSRROG00000045696	RANBP17 (ENSRROG00000045173)
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000159824.c	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b.j ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00620000089286	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Vervet Monkey	MODERN SPECIES	15	MSX2 (ENSCSAG00000009496)	NSG2 (ENSCSAG00000009499)	C5orf47 (ENSCSAG00000009504)	CPEB4 (ENSCSAG00000009516) #10	BOD1 (ENSCSAG00000009522) #11	STC2 (ENSCSAG00000009529) #12	NKX2-5 (ENSCSAG00000009533) #13	BNIP1 (ENSCSAG00000009541) #14	CREBRF (ENSCSAG00000009545) #15	ATP6V0E1 (ENSCSAG00000009548) #16	ENSCSAG00000009551 ##17	ERGIC1 (ENSCSAG00000009579) #18	DUSP1 (ENSCSAG00000009591) #19	NEURL1B (ENSCSAG00000009597) #20	SH3PXD2B (ENSCSAG00000009606) #21	UBTD2 (ENSCSAG00000009612) #22	EFCAB9 (ENSCSAG00000009621) #23	STK10 (ENSCSAG00000009634) #25	FBXW11 (ENSCSAG00000009643)	SMIM23 (ENSCSAG00000009650)	ENSCSAG00000009657	FGF18 (ENSCSAG00000009667)	NPM1 (ENSCSAG00000009697)	TLX3 (ENSCSAG00000009715)	ENSCSAG00000009726	RANBP17 (ENSCSAG00000009868)	GABRP (ENSCSAG00000009945)	KCNIP1 (ENSCSAG00000009958)	KCNMB1 (ENSCSAG00000009964)	LCP2 (ENSCSAG00000010046)	C5orf58 (ENSCSAG00000010070)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b.j ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00620000089286	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Macaca	ANCESTRAL SPECIES	7	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b.i.b ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00620000089286	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000159824.c	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00940000154979.s.b.b ##11	ENSGT00390000005989.a #12	ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.a	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00620000089286	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.a.a.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000062346	MSX2 (ENSMFAG00000056450)	ENSMFAG00000010780	NSG2 (ENSMFAG00000033258)	CPEB4 (ENSMFAG00000003075) #10	ENSMFAG00000003066 ##11	STC2 (ENSMFAG00000048596) #12	ENSMFAG00000060111	NKX2-5 (ENSMFAG00000034569) #13	BNIP1 (ENSMFAG00000037018) #14	CREBRF (ENSMFAG00000036600) #15	ATP6V0E1 (ENSMFAG00000045429) #16	ERGIC1 (ENSMFAG00000037788) #18	DUSP1 (ENSMFAG00000044045) #19	SH3PXD2B (ENSMFAG00000040954) #21	UBTD2 (ENSMFAG00000052150) #22	EFCAB9 (ENSMFAG00000043157) #23	ENSMFAG00000051726	STK10 (ENSMFAG00000033923) #25	ENSMFAG00000057552 #24	ENSMFAG00000047803	FBXW11 (ENSMFAG00000039918)	SMIM23 (ENSMFAG00000039057)	ENSMFAG00000039380	FGF18 (ENSMFAG00000064381)	NPM1 (ENSMFAG00000043579)	ENSMFAG00000062884	TLX3 (ENSMFAG00000048247)	RANBP17 (ENSMFAG00000034347)	GABRP (ENSMFAG00000003571)	KCNMB1 (ENSMFAG00000002422)
Rhesus	MODERN SPECIES	16	MSX2 (ENSMMUG00000004932)	NSG2 (ENSMMUG00000059444)	CPEB4 (ENSMMUG00000019926) #10	BOD1 (ENSMMUG00000013793) #11	ENSMMUG00000054693	STC2 (ENSMMUG00000014782) #12	ENSMMUG00000055739	NKX2-5 (ENSMMUG00000064883) #13	BNIP1 (ENSMMUG00000014607) #14	CREBRF (ENSMMUG00000005909) #15	ATP6V0E1 (ENSMMUG00000059290) #16	ERGIC1 (ENSMMUG00000003067) #18	DUSP1 (ENSMMUG00000059336) #19	NEURL1B (ENSMMUG00000008848) #20	SH3PXD2B (ENSMMUG00000010102) #21	UBTD2 (ENSMMUG00000052139) #22	EFCAB9 (ENSMMUG00000059414) #23	ENSMMUG00000057388	STK10 (ENSMMUG00000006811) #25	FBXW11 (ENSMMUG00000016008)	SMIM23 (ENSMMUG00000057889)	FGF18 (ENSMMUG00000019401)	NPM1 (ENSMMUG00000015781)	ENSMMUG00000056310	TLX3 (ENSMMUG00000057846)	ENSMMUG00000059105	RANBP17 (ENSMMUG00000015840)	GABRP (ENSMMUG00000000570)	KCNIP1 (ENSMMUG00000009171)	KCNMB1 (ENSMMUG00000060800)	LCP2 (ENSMMUG00000014126)
Pig-tailed macaque	MODERN SPECIES	566	NSG2 (ENSMNEG00000030122)	C5orf47 (ENSMNEG00000036162)	CPEB4 (ENSMNEG00000034689) #10	BOD1 (ENSMNEG00000038516) #11	STC2 (ENSMNEG00000032109) #12	NKX2-5 (ENSMNEG00000016498) #13	BNIP1 (ENSMNEG00000033003) #14	CREBRF (ENSMNEG00000032133) #15	ATP6V0E1 (ENSMNEG00000036422) #16	RPL26L1 (ENSMNEG00000029899) ##17	ERGIC1 (ENSMNEG00000031904) #18	DUSP1 (ENSMNEG00000043275) #19	NEURL1B (ENSMNEG00000044968) #20	SH3PXD2B (ENSMNEG00000036165) #21	ENSMNEG00000035122	UBTD2 (ENSMNEG00000031278) #22	EFCAB9 (ENSMNEG00000014910) #23	STK10 (ENSMNEG00000029184) #25	FBXW11 (ENSMNEG00000033472)	SMIM23 (ENSMNEG00000029674)	ENSMNEG00000044745	FGF18 (ENSMNEG00000039895)	NPM1 (ENSMNEG00000039074)	TLX3 (ENSMNEG00000041964)	ENSMNEG00000024836	RANBP17 (ENSMNEG00000045556)	GABRP (ENSMNEG00000043880)	KCNMB1 (ENSMNEG00000038025)	KCNIP1 (ENSMNEG00000037144)	LCP2 (ENSMNEG00000039031)	C5orf58 (ENSMNEG00000045509)
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b.j ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00620000089286	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Olive baboon	MODERN SPECIES	15	MSX2 (ENSPANG00000041175)	ENSPANG00000045766	ENSPANG00000019682	CPEB4 (ENSPANG00000009300) #10	BOD1 (ENSPANG00000005513) #11	STC2 (ENSPANG00000045597) #12	NKX2-5 (ENSPANG00000012362) #13	BNIP1 (ENSPANG00000003761) #14	CREBRF (ENSPANG00000013059) #15	ENSPANG00000011468 #16	RPL26L1 (ENSPANG00000012204) ##17	ERGIC1 (ENSPANG00000023223) #18	ENSPANG00000049887 #19	NEURL1B (ENSPANG00000001624) #20	SH3PXD2B (ENSPANG00000013857) #21	UBTD2 (ENSPANG00000002422) #22	EFCAB9 (ENSPANG00000003762) #23	STK10 (ENSPANG00000009341) #25	FBXW11 (ENSPANG00000006849)	SMIM23 (ENSPANG00000003366)	FGF18 (ENSPANG00000017661)	NPM1 (ENSPANG00000000217)	TLX3 (ENSPANG00000000216)	ENSPANG00000040245	RANBP17 (ENSPANG00000002592)	GABRP (ENSPANG00000013183)	KCNMB1 (ENSPANG00000008079)	KCNIP1 (ENSPANG00000005266)	LCP2 (ENSPANG00000008703)	C5orf58 (ENSPANG00000003590)	FOXI1 (ENSPANG00000035900)
Cercopithecinae_d	ANCESTRAL SPECIES	53	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a.d #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b.j ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00620000089286	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Sooty mangabey	MODERN SPECIES	597	ENSCATG00000011643	NSG2 (ENSCATG00000029990)	C5orf47 (ENSCATG00000012564)	CPEB4 (ENSCATG00000014550) #10	ENSCATG00000005639 #11	STC2 (ENSCATG00000030924) #12	NKX2-5 (ENSCATG00000031410) #13	BNIP1 (ENSCATG00000043162) #14	CREBRF (ENSCATG00000040516) #15	ATP6V0E1 (ENSCATG00000036579) #16	RPL26L1 (ENSCATG00000029601) ##17	ERGIC1 (ENSCATG00000041026) #18	DUSP1 (ENSCATG00000027456) #19	NEURL1B (ENSCATG00000038257) #20	SH3PXD2B (ENSCATG00000043516) #21	UBTD2 (ENSCATG00000032931) #22	EFCAB9 (ENSCATG00000042923) #23	STK10 (ENSCATG00000036488) #25	FBXW11 (ENSCATG00000000142)	SMIM23 (ENSCATG00000031141)	ENSCATG00000040661	FGF18 (ENSCATG00000040646)	NPM1 (ENSCATG00000013107)	TLX3 (ENSCATG00000039358)	ENSCATG00000027225	RANBP17 (ENSCATG00000011884)	GABRP (ENSCATG00000038559)	KCNMB1 (ENSCATG00000029648)	KCNIP1 (ENSCATG00000040305)	LCP2 (ENSCATG00000014913)	C5orf58 (ENSCATG00000034297)
Drill	MODERN SPECIES	960				ENSMLEG00000030320 ##11	STC2 (ENSMLEG00000026461) #12	NKX2-5 (ENSMLEG00000000339) #13	BNIP1 (ENSMLEG00000039126) #14	CREBRF (ENSMLEG00000000513) #15	ATP6V0E1 (ENSMLEG00000030149) #16	ENSMLEG00000037483 ##17	ERGIC1 (ENSMLEG00000029804) #18	ENSMLEG00000040155	DUSP1 (ENSMLEG00000039172) #19	NEURL1B (ENSMLEG00000033205) #20	SH3PXD2B (ENSMLEG00000029587) #21	UBTD2 (ENSMLEG00000038379) #22	EFCAB9 (ENSMLEG00000038052) #23	STK10 (ENSMLEG00000041182) #25	FBXW11 (ENSMLEG00000035049)	SMIM23 (ENSMLEG00000042760)	ENSMLEG00000040662	FGF18 (ENSMLEG00000029867)	NPM1 (ENSMLEG00000030928)	TLX3 (ENSMLEG00000041555)
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172 #24	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316
Gibbon	MODERN SPECIES	11	ENSNLEG00000033959	NSG2 (ENSNLEG00000000522)	C5orf47 (ENSNLEG00000027778)	CPEB4 (ENSNLEG00000000487) #10	BOD1 (ENSNLEG00000000476) #11	STC2 (ENSNLEG00000000463) #12	NKX2-5 (ENSNLEG00000000457) #13	BNIP1 (ENSNLEG00000000453) #14	ENSNLEG00000000442 #15	ENSNLEG00000030031 #16	ERGIC1 (ENSNLEG00000000407) #18	ENSNLEG00000033458	DUSP1 (ENSNLEG00000035887) #19	ENSNLEG00000000392 #20	SH3PXD2B (ENSNLEG00000000384) #21	UBTD2 (ENSNLEG00000000381) #22	EFCAB9 (ENSNLEG00000000378) #23	STK10 (ENSNLEG00000000350) #25	ENSNLEG00000031400	FBXW11 (ENSNLEG00000000338)	ENSNLEG00000000336	ENSNLEG00000000334	NPM1 (ENSNLEG00000000304)	TLX3 (ENSNLEG00000000302)	RANBP17 (ENSNLEG00000000281)	ENSNLEG00000032964	GABRP (ENSNLEG00000000264)	KCNIP1 (ENSNLEG00000000256)	ENSNLEG00000030707	ENSNLEG00000018628	ENSNLEG00000005166
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172 #24	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316
Orangutan	MODERN SPECIES	18	C5orf47 (ENSPPYG00000016059)	ENSPPYG00000031520 #10	ENSPPYG00000016057 #11	STC2 (ENSPPYG00000031955) #12	ENSPPYG00000039258 #13	BNIP1 (ENSPPYG00000016054) #14	CREBRF (ENSPPYG00000016053) #15	ATP6V0E1 (ENSPPYG00000039284) #16	ENSPPYG00000016051	RPL26L1 (ENSPPYG00000025929) #17	ERGIC1 (ENSPPYG00000016049) #18	DUSP1 (ENSPPYG00000016048) #19	ENSPPYG00000016047	NEURL1B (ENSPPYG00000016046) #20	SH3PXD2B (ENSPPYG00000016044) #21	UBTD2 (ENSPPYG00000040678) #22	EFCAB9 (ENSPPYG00000016042) #23	STK10 (ENSPPYG00000016041) #25	FBXW11 (ENSPPYG00000016040)	SMIM23 (ENSPPYG00000016039)	FGF18 (ENSPPYG00000016038)	NPM1 (ENSPPYG00000016037)	TLX3 (ENSPPYG00000016036)	RANBP17 (ENSPPYG00000016035)	GABRP (ENSPPYG00000016147)	ENSPPYG00000034673	KCNMB1 (ENSPPYG00000016033)	KCNIP1 (ENSPPYG00000016034)	LCP2 (ENSPPYG00000016030)	ENSPPYG00000031742	FOXI1 (ENSPPYG00000031912)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172 #24	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000155723.b	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Gorilla	MODERN SPECIES	18	C5orf47 (ENSGGOG00000013448)	CPEB4 (ENSGGOG00000010097) #10	BOD1 (ENSGGOG00000010925) #11	STC2 (ENSGGOG00000013736) #12	NKX2-5 (ENSGGOG00000017092) #13	BNIP1 (ENSGGOG00000002239) #14	CREBRF (ENSGGOG00000011220) #15	ATP6V0E1 (ENSGGOG00000006701) #16	ENSGGOG00000038246	RPL26L1 (ENSGGOG00000025582) #17	ENSGGOG00000044004	ERGIC1 (ENSGGOG00000008455) #18	DUSP1 (ENSGGOG00000007135) #19	ENSGGOG00000004882 #20	SH3PXD2B (ENSGGOG00000008765) #21	UBTD2 (ENSGGOG00000043610) #22	EFCAB9 (ENSGGOG00000011373) #23	STK10 (ENSGGOG00000012427) #25	FBXW11 (ENSGGOG00000007880)	SMIM23 (ENSGGOG00000004301)	FGF18 (ENSGGOG00000007226)	NPM1 (ENSGGOG00000007220)	ENSGGOG00000023662	ENSGGOG00000042599	RANBP17 (ENSGGOG00000010374)	GABRP (ENSGGOG00000003834)	KCNMB1 (ENSGGOG00000007162)	KCNIP1 (ENSGGOG00000007280)	LCP2 (ENSGGOG00000006590)	ENSGGOG00000027265	FOXI1 (ENSGGOG00000015780)
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172 #24	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000155723.b	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Human	MODERN SPECIES	17	MSX2 (ENSG00000120149)	NSG2 (ENSG00000170091)	C5orf47 (ENSG00000185056)	CPEB4 (ENSG00000113742) #10	BOD1 (ENSG00000145919) #11	STC2 (ENSG00000113739) #12	NKX2-5 (ENSG00000183072) #13	BNIP1 (ENSG00000113734) #14	CREBRF (ENSG00000164463) #15	ATP6V0E1 (ENSG00000113732) #16	RPL26L1 (ENSG00000037241) #17	ERGIC1 (ENSG00000113719) #18	DUSP1 (ENSG00000120129) #19	NEURL1B (ENSG00000214357) #20	SH3PXD2B (ENSG00000174705) #21	UBTD2 (ENSG00000168246) #22	EFCAB9 (ENSG00000214360) #23	STK10 (ENSG00000072786) #25	FBXW11 (ENSG00000072803)	SMIM23 (ENSG00000185662)	FGF18 (ENSG00000156427)	NPM1 (ENSG00000181163)	TLX3 (ENSG00000164438)	RANBP17 (ENSG00000204764)	GABRP (ENSG00000094755)	KCNMB1 (ENSG00000145936)	KCNIP1 (ENSG00000182132)	LCP2 (ENSG00000043462)	C5orf58 (ENSG00000234511)	FOXI1 (ENSG00000168269)	INSYN2B (ENSG00000204767)
Pan	ANCESTRAL SPECIES	10	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172 #24	ENSGT00940000156818 #25	ENSGT00940000155898.c	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000160629	ENSGT00940000155723.b	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585
Chimpanzee	MODERN SPECIES	18	CPEB4 (ENSPTRG00000017545) #10	BOD1 (ENSPTRG00000017544) #11	STC2 (ENSPTRG00000017543) #12	NKX2-5 (ENSPTRG00000017542) #13	BNIP1 (ENSPTRG00000017541) #14	CREBRF (ENSPTRG00000017540) #15	ATP6V0E1 (ENSPTRG00000017538) #16	ENSPTRG00000041040	RPL26L1 (ENSPTRG00000043990) #17	ENSPTRG00000046007	ERGIC1 (ENSPTRG00000017535) #18	DUSP1 (ENSPTRG00000017534) #19	ENSPTRG00000046003	NEURL1B (ENSPTRG00000033712) #20	SH3PXD2B (ENSPTRG00000017531) #21	UBTD2 (ENSPTRG00000044878) #22	EFCAB9 (ENSPTRG00000034173) #23	ENSPTRG00000050304 #24	STK10 (ENSPTRG00000017527) #25	FBXW11 (ENSPTRG00000017526)	SMIM23 (ENSPTRG00000017525)	FGF18 (ENSPTRG00000017524)	NPM1 (ENSPTRG00000049153)	TLX3 (ENSPTRG00000017522)	ENSPTRG00000052692	ENSPTRG00000046140	RANBP17 (ENSPTRG00000028506)	GABRP (ENSPTRG00000017520)	KCNMB1 (ENSPTRG00000017518)	KCNIP1 (ENSPTRG00000017519)	LCP2 (ENSPTRG00000017517)
Bonobo	MODERN SPECIES	18	CPEB4 (ENSPPAG00000030599) #10	BOD1 (ENSPPAG00000033401) #11	STC2 (ENSPPAG00000042436) #12	NKX2-5 (ENSPPAG00000031047) #13	BNIP1 (ENSPPAG00000029895) #14	CREBRF (ENSPPAG00000039864) #15	ATP6V0E1 (ENSPPAG00000037191) #16	ENSPPAG00000043282	RPL26L1 (ENSPPAG00000029664) #17	ENSPPAG00000036347	ERGIC1 (ENSPPAG00000030828) #18	DUSP1 (ENSPPAG00000028299) #19	ENSPPAG00000030109	ENSPPAG00000014966 #20	SH3PXD2B (ENSPPAG00000028491) #21	UBTD2 (ENSPPAG00000040436) #22	EFCAB9 (ENSPPAG00000037845) #23	ENSPPAG00000041942 #24	STK10 (ENSPPAG00000017062) #25	FBXW11 (ENSPPAG00000041177)	SMIM23 (ENSPPAG00000006847)	FGF18 (ENSPPAG00000043852)	NPM1 (ENSPPAG00000041884)	TLX3 (ENSPPAG00000035866)	ENSPPAG00000041342	RANBP17 (ENSPPAG00000041600)	GABRP (ENSPPAG00000016335)	KCNIP1 (ENSPPAG00000033996)	KCNMB1 (ENSPPAG00000038648)	LCP2 (ENSPPAG00000035616)	FOXI1 (ENSPPAG00000024818)
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.s #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.g.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Cebidae	ANCESTRAL SPECIES	24	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.s #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.g.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Marmoset	MODERN SPECIES	11	ENSCJAG00000067799	ENSCJAG00000075851	NSG2 (ENSCJAG00000019152)	C5orf47 (ENSCJAG00000076312)	CPEB4 (ENSCJAG00000019166) #10	ENSCJAG00000031971 #11	ENSCJAG00000045816	STC2 (ENSCJAG00000054466) #12	NKX2-5 (ENSCJAG00000078127) #13	BNIP1 (ENSCJAG00000019186) #14	CREBRF (ENSCJAG00000019193) #15	ERGIC1 (ENSCJAG00000019238) #18	DUSP1 (ENSCJAG00000067622) #19	NEURL1B (ENSCJAG00000019254) #20	SH3PXD2B (ENSCJAG00000019258) #21	UBTD2 (ENSCJAG00000046779) #22	ENSCJAG00000047953	EFCAB9 (ENSCJAG00000019273) #23	ENSCJAG00000069421	ENSCJAG00000069688	STK10 (ENSCJAG00000019275) #25	ENSCJAG00000073693	FBXW11 (ENSCJAG00000019297)	SMIM23 (ENSCJAG00000019324)	FGF18 (ENSCJAG00000019329)	ENSCJAG00000019334	TLX3 (ENSCJAG00000038714)	ENSCJAG00000038990	ENSCJAG00000083773	RANBP17 (ENSCJAG00000019368)	GABRP (ENSCJAG00000019417)
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979.s.a.a #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.s #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.g.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Bolivian squirrel monkey	MODERN SPECIES	123	NSG2 (ENSSBOG00000028874)	C5orf47 (ENSSBOG00000011758)	CPEB4 (ENSSBOG00000002632) #10	ENSSBOG00000023774 ##11	STC2 (ENSSBOG00000035805) #12	NKX2-5 (ENSSBOG00000024121) #13	BNIP1 (ENSSBOG00000029104) #14	ENSSBOG00000026680	CREBRF (ENSSBOG00000031151) #15	ATP6V0E1 (ENSSBOG00000031772) #16	RPL26L1 (ENSSBOG00000027992) #17	ERGIC1 (ENSSBOG00000032967) #18	DUSP1 (ENSSBOG00000027324) #19	NEURL1B (ENSSBOG00000029939) #20	SH3PXD2B (ENSSBOG00000014112) #21	UBTD2 (ENSSBOG00000013274) #22	EFCAB9 (ENSSBOG00000019620) #23	STK10 (ENSSBOG00000033405) #25	FBXW11 (ENSSBOG00000023046)	SMIM23 (ENSSBOG00000018130)	FGF18 (ENSSBOG00000024519)	ENSSBOG00000033634	TLX3 (ENSSBOG00000034367)	RANBP17 (ENSSBOG00000032147)	GABRP (ENSSBOG00000028102)	KCNIP1 (ENSSBOG00000001622)	KCNMB1 (ENSSBOG00000026355)	LCP2 (ENSSBOG00000035016)	C5orf58 (ENSSBOG00000020509)	FOXI1 (ENSSBOG00000033617)	DOCK2 (ENSSBOG00000026287)
Capuchin	MODERN SPECIES	200								ENSCCAG00000036235 #15	ENSCCAG00000030182 #16	RPL26L1 (ENSCCAG00000022572) #17	ERGIC1 (ENSCCAG00000027066) #18	DUSP1 (ENSCCAG00000028115) #19	ENSCCAG00000023304	NEURL1B (ENSCCAG00000024696) #20	SH3PXD2B (ENSCCAG00000018545) #21	UBTD2 (ENSCCAG00000030325) #22	EFCAB9 (ENSCCAG00000030106) #23	STK10 (ENSCCAG00000021548) #25	ENSCCAG00000034903	ENSCCAG00000035992	SMIM23 (ENSCCAG00000027927)	FGF18 (ENSCCAG00000025826)	ENSCCAG00000034814	TLX3 (ENSCCAG00000022971)	RANBP17 (ENSCCAG00000021816)	GABRP (ENSCCAG00000027392)	KCNIP1 (ENSCCAG00000025512)	KCNMB1 (ENSCCAG00000029582)	LCP2 (ENSCCAG00000014560)	ENSCCAG00000019246	FOXI1 (ENSCCAG00000029998)
Mas night monkey	MODERN SPECIES	610	C5orf47 (ENSANAG00000026045)	CPEB4 (ENSANAG00000038371) #10	BOD1 (ENSANAG00000025713) #11	STC2 (ENSANAG00000031511) #12	NKX2-5 (ENSANAG00000024360) #13	BNIP1 (ENSANAG00000033155) #14	ENSANAG00000026625	CREBRF (ENSANAG00000029119) #15	ENSANAG00000025907 #16	RPL26L1 (ENSANAG00000034277) #17	ENSANAG00000033316	ERGIC1 (ENSANAG00000037298) #18	DUSP1 (ENSANAG00000027062) #19	NEURL1B (ENSANAG00000038171) #20	SH3PXD2B (ENSANAG00000014072) #21	UBTD2 (ENSANAG00000033217) #22	EFCAB9 (ENSANAG00000032826) #23	STK10 (ENSANAG00000027679) #25	FBXW11 (ENSANAG00000036790)	ENSANAG00000024342	SMIM23 (ENSANAG00000018501)	FGF18 (ENSANAG00000028876)	ENSANAG00000034949	TLX3 (ENSANAG00000029429)	ENSANAG00000021888	ENSANAG00000031950	RANBP17 (ENSANAG00000028172)	GABRP (ENSANAG00000029839)	KCNMB1 (ENSANAG00000034763)	KCNIP1 (ENSANAG00000014990)	LCP2 (ENSANAG00000031590)
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	5382														EFNB2 (ENSTSYG00000014456)	ENSTSYG00000029951	ENSTSYG00000028850 #22	EFCAB9 (ENSTSYG00000008293) #23	STK10 (ENSTSYG00000006260) #25
Tarsier	MODERN SPECIES	107																ENSTSYG00000026922 #22
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Lemuriformes	ANCESTRAL SPECIES	70	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.a.a.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Mouse lemur	MODERN SPECIES	15	TMEM128 (ENSMICG00000042056)	LYAR (ENSMICG00000000202)	ZBTB49 (ENSMICG00000042304)	NSG1 (ENSMICG00000009553)	STX18 (ENSMICG00000009557)	MSX1 (ENSMICG00000043130)	ENSMICG00000044188	STK32B (ENSMICG00000047439)	EVC2 (ENSMICG00000010507)	EVC (ENSMICG00000010561)	ENSMICG00000032986	CRMP1 (ENSMICG00000005762)	C4orf50 (ENSMICG00000046962)	JAKMIP1 (ENSMICG00000002468)	SH3PXD2B (ENSMICG00000011279) #21	UBTD2 (ENSMICG00000037280) #22	EFCAB9 (ENSMICG00000041945) #23	ENSMICG00000038026	STK10 (ENSMICG00000004517) #25	ENSMICG00000004512	ENSMICG00000029505	ENSMICG00000045663	FOXI1 (ENSMICG00000041455)	FGF18 (ENSMICG00000012403)	ENSMICG00000002717	TLX3 (ENSMICG00000045444)	ENSMICG00000033249	RANBP17 (ENSMICG00000027710)	GABRP (ENSMICG00000012635)	KCNMB1 (ENSMICG00000043676)	KCNIP1 (ENSMICG00000012622)
Lemuriformes_a	ANCESTRAL SPECIES	146			ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.a.a.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Coquerels sifaka	MODERN SPECIES	428	SPINK13 (ENSPCOG00000018652)	NSG2 (ENSPCOG00000019558)	CPEB4 (ENSPCOG00000004676) #10	ENSPCOG00000017551 #11	STC2 (ENSPCOG00000016688) #12	NKX2-5 (ENSPCOG00000019525) #13	BNIP1 (ENSPCOG00000018899) #14	CREBRF (ENSPCOG00000024235) #15	ATP6V0E1 (ENSPCOG00000022516) #16	RPL26L1 (ENSPCOG00000016409) #17	ERGIC1 (ENSPCOG00000014528) #18	DUSP1 (ENSPCOG00000025861) #19	NEURL1B (ENSPCOG00000025987) #20	SH3PXD2B (ENSPCOG00000021760) #21	ENSPCOG00000023430	UBTD2 (ENSPCOG00000014867) #22	EFCAB9 (ENSPCOG00000015386) #23	STK10 (ENSPCOG00000019111) #25	FBXW11 (ENSPCOG00000017113)	SMIM23 (ENSPCOG00000018006)	FGF18 (ENSPCOG00000028662)	ENSPCOG00000024038	TLX3 (ENSPCOG00000015947)	ENSPCOG00000015791	ENSPCOG00000007993	GABRP (ENSPCOG00000017643)	KCNMB1 (ENSPCOG00000021448)	KCNIP1 (ENSPCOG00000015105)	LCP2 (ENSPCOG00000022747)	ENSPCOG00000012130	FOXI1 (ENSPCOG00000022931)
Greater bamboo lemur	MODERN SPECIES	635															ENSPSMG00000017278	UBTD2 (ENSPSMG00000017274) #22	EFCAB9 (ENSPSMG00000017273) #23	STK10 (ENSPSMG00000017263) #25	FBXW11 (ENSPSMG00000017174)	SMIM23 (ENSPSMG00000017034)	FGF18 (ENSPSMG00000017028)	ENSPSMG00000016994	TLX3 (ENSPSMG00000016978)	RANBP17 (ENSPSMG00000016972)	GABRP (ENSPSMG00000016887)	KCNMB1 (ENSPSMG00000016861)	KCNIP1 (ENSPSMG00000016848)	LCP2 (ENSPSMG00000016768)	C5orf58 (ENSPSMG00000016675)	FOXI1 (ENSPSMG00000016670)	INSYN2B (ENSPSMG00000016662)
Bushbaby	MODERN SPECIES	118	DRD1 (ENSOGAG00000000909)	MSX2 (ENSOGAG00000032139)	NSG2 (ENSOGAG00000010238)	CPEB4 (ENSOGAG00000004243) #10	ENSOGAG00000001107 #11	STC2 (ENSOGAG00000007539) #12	NKX2-5 (ENSOGAG00000030259) #13	BNIP1 (ENSOGAG00000007537) #14	ENSOGAG00000030210 #15	ATP6V0E1 (ENSOGAG00000017071) #16	ENSOGAG00000032228	ERGIC1 (ENSOGAG00000017066) #18	DUSP1 (ENSOGAG00000017064) #19	NEURL1B (ENSOGAG00000026783) #20	SH3PXD2B (ENSOGAG00000012721) #21	UBTD2 (ENSOGAG00000011997) #22	EFCAB9 (ENSOGAG00000033621) #23	STK10 (ENSOGAG00000011991) #25	FBXW11 (ENSOGAG00000011988)	SMIM23 (ENSOGAG00000025446)	ENSOGAG00000028434	FGF18 (ENSOGAG00000013617)	ENSOGAG00000013616	TLX3 (ENSOGAG00000029862)	RANBP17 (ENSOGAG00000013609)	ENSOGAG00000028828	GABRP (ENSOGAG00000013604)	KCNIP1 (ENSOGAG00000013599)	KCNMB1 (ENSOGAG00000016972)	LCP2 (ENSOGAG00000002810)	FOXI1 (ENSOGAG00000032689)
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Tree shrew	MODERN SPECIES	3912																UBTD2 (ENSTBEG00000001787) #22	STK10 (ENSTBEG00000001064) #25	FBXW11 (ENSTBEG00000009311)
Glires	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Lagomorpha	ANCESTRAL SPECIES	32	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.b.d	ENSGT00940000153052.c.b.a.a.b.c.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Pika	MODERN SPECIES	4719															ENSOPRG00000013081 #21	ENSOPRG00000013077 #22	ENSOPRG00000018566 #23
Rabbit	MODERN SPECIES	14	MSX2 (ENSOCUG00000009161)	NSG2 (ENSOCUG00000038430)	CPEB4 (ENSOCUG00000008971) #10	ENSOCUG00000014283 #11	STC2 (ENSOCUG00000007985) #12	NKX2-5 (ENSOCUG00000000041) #13	BNIP1 (ENSOCUG00000000040) #14	CREBRF (ENSOCUG00000000038) #15	ATP6V0E1 (ENSOCUG00000006174) #16	RPL26L1 (ENSOCUG00000006172) #17	ERGIC1 (ENSOCUG00000029231) #18	DUSP1 (ENSOCUG00000007999) #19	NEURL1B (ENSOCUG00000027790) #20	SH3PXD2B (ENSOCUG00000006784) #21	ENSOCUG00000034187	UBTD2 (ENSOCUG00000005108) #22	EFCAB9 (ENSOCUG00000024250) #23	STK10 (ENSOCUG00000005098) #25	FBXW11 (ENSOCUG00000007739)	FGF18 (ENSOCUG00000011124)	ENSOCUG00000011117	TLX3 (ENSOCUG00000000918)	RANBP17 (ENSOCUG00000011100)	GABRP (ENSOCUG00000008191)	KCNMB1 (ENSOCUG00000000539)	KCNIP1 (ENSOCUG00000000540)	LCP2 (ENSOCUG00000000534)	C5orf58 (ENSOCUG00000030888)	FOXI1 (ENSOCUG00000000836)	INSYN2B (ENSOCUG00000000834)	ENSOCUG00000031547
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000167072	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.a.b.b.b.q ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Myomorpha	ANCESTRAL SPECIES	28		ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.a.b.b.b.q ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Muroidea	ANCESTRAL SPECIES	10	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.a.b.b.b.q ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d.d.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d.d.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	15	Parn (ENSMOCG00000022211)	Bfar (ENSMOCG00000015581)	Pla2g10 (ENSMOCG00000005669)	Rrn3 (ENSMOCG00000016697)	Ntan1 (ENSMOCG00000022646)	ENSMOCG00000016638	Mpv17l (ENSMOCG00000016475)	Bmerb1 (ENSMOCG00000018990)	ENSMOCG00000022220	Marf1 (ENSMOCG00000001136)	Nde1 (ENSMOCG00000004322)	Myh11 (ENSMOCG00000001351)	Cep20 (ENSMOCG00000002426)	Abcc1 (ENSMOCG00000001674)	ENSMOCG00000022493 #21	ENSMOCG00000022075 #22	Efcab9 (ENSMOCG00000022547) #23	ENSMOCG00000022759 #25	Fbxw11 (ENSMOCG00000005139)	Smim23 (ENSMOCG00000008049)	Fgf18 (ENSMOCG00000010978)	ENSMOCG00000001485	Tlx3 (ENSMOCG00000013764)	Ranbp17 (ENSMOCG00000007105)	Gabrp (ENSMOCG00000022600)	Kcnip1 (ENSMOCG00000019706)	Kcnmb1 (ENSMOCG00000012254)	Lcp2 (ENSMOCG00000012783)	Foxi1 (ENSMOCG00000004587)	Dock2 (ENSMOCG00000007487)	Insyn2b (ENSMOCG00000022544)
Prairie vole	MODERN SPECIES		Lrr1 (ENSMOCG00000018456)	Rps29 (ENSMOCG00000017681)	Mdga2 (ENSMOCG00000022499)	ENSMOCG00000005109	Rpl10l (ENSMOCG00000009910)	Mis18bp1 (ENSMOCG00000017171)	Fancm (ENSMOCG00000008775)	Fkbp3 (ENSMOCG00000011130)	Prpf39 (ENSMOCG00000009148)	Togaram1 (ENSMOCG00000021755)	Klhl28 (ENSMOCG00000006562)	Gm527 (ENSMOCG00000005543)	ENSMOCG00000015843	Lrfn5 (ENSMOCG00000021045)	ENSMOCG00000014206	ENSMOCG00000013030 #22
Northern American deer mouse	MODERN SPECIES	21	Il9r (ENSPEMG00000015108)	Nsg2 (ENSPEMG00000029190)	4930524B15Rik (ENSPEMG00000016302)	Cpeb4 (ENSPEMG00000025728) #10	ENSPEMG00000030821 #11	Stc2 (ENSPEMG00000031170) #12	Nkx2-5 (ENSPEMG00000012263) #13	Bnip1 (ENSPEMG00000014579) #14	Crebrf (ENSPEMG00000019136) #15	Atp6v0e (ENSPEMG00000016171) #16	Ergic1 (ENSPEMG00000011371) #18	ENSPEMG00000029256	Dusp1 (ENSPEMG00000008974) #19	Neurl1b (ENSPEMG00000018647) #20	Sh3pxd2b (ENSPEMG00000011209) #21	Ubtd2 (ENSPEMG00000028774) #22	Efcab9 (ENSPEMG00000012516) #23	Stk10 (ENSPEMG00000016749) #25	Fbxw11 (ENSPEMG00000014614)	Smim23 (ENSPEMG00000009648)	ENSPEMG00000005862	Fgf18 (ENSPEMG00000027707)	ENSPEMG00000010032	Tlx3 (ENSPEMG00000009002)	Ranbp17 (ENSPEMG00000013086)	Gabrp (ENSPEMG00000008255)	Kcnip1 (ENSPEMG00000007681)	Kcnmb1 (ENSPEMG00000025688)	Lcp2 (ENSPEMG00000011935)	4930469K13Rik (ENSPEMG00000029094)	Foxi1 (ENSPEMG00000015123)
Cricetinae	ANCESTRAL SPECIES		ENSGT00510000049125	ENSGT00940000167072	ENSGT00640000091672	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d.d.a.a.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Chinese hamster chok1gshd	MODERN SPECIES	229	Nsg2 (ENSCGRG00001010888)	ENSCGRG00001013841	4930524B15Rik (ENSCGRG00001017897)	ENSCGRG00001019946	Cpeb4 (ENSCGRG00001021805) #10	Bod1 (ENSCGRG00001023221) #11	Stc2 (ENSCGRG00001023337) #12	Nkx2-5 (ENSCGRG00001024735) #13	Bnip1 (ENSCGRG00001000805) #14	Crebrf (ENSCGRG00001007231) #15	Atp6v0e (ENSCGRG00001022946) #16	Ergic1 (ENSCGRG00001024104) #18	Dusp1 (ENSCGRG00001019246) #19	Neurl1b (ENSCGRG00001022855) #20	Sh3pxd2b (ENSCGRG00001010764) #21	Ubtd2 (ENSCGRG00001022026) #22	Efcab9 (ENSCGRG00001001253) #23	Stk10 (ENSCGRG00001013751) #25	Fbxw11 (ENSCGRG00001016029)	Smim23 (ENSCGRG00001015541)	Fgf18 (ENSCGRG00001017188)	ENSCGRG00001001985	Tlx3 (ENSCGRG00001015510)	Ranbp17 (ENSCGRG00001015450)	ENSCGRG00001012148	Gabrp (ENSCGRG00001018465)	Kcnip1 (ENSCGRG00001012407)	Kcnmb1 (ENSCGRG00001013776)	Lcp2 (ENSCGRG00001017371)	Foxi1 (ENSCGRG00001018922)	ENSCGRG00001024778
Golden Hamster	MODERN SPECIES	861							Stc2 (ENSMAUG00000008254) #12	Nkx2-5 (ENSMAUG00000007694) #13	Bnip1 (ENSMAUG00000016525) #14	Crebrf (ENSMAUG00000016495) #15	Atp6v0e (ENSMAUG00000013929) #16	Ergic1 (ENSMAUG00000019097) #18	Dusp1 (ENSMAUG00000008804) #19	Neurl1b (ENSMAUG00000009175) #20	ENSMAUG00000001948 #21	Ubtd2 (ENSMAUG00000000209) #22	Efcab9 (ENSMAUG00000012647) #23
Murinae	ANCESTRAL SPECIES	7	ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Mus	ANCESTRAL SPECIES	2		ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00640000091672	ENSGT00390000000483.a.a	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00970000195169	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000159080	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00640000091672	ENSGT00390000000483.a.a	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00970000195169	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00640000091672	ENSGT00390000000483.a.a	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000162598.c	ENSGT00940000154590	ENSGT00940000162598.d	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00640000091672	ENSGT00390000000483.a.a	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000162598.c	ENSGT00940000154590	ENSGT00940000162598.d	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.d.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT01060000252083	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316
Steppe mouse	MODERN SPECIES	3235	ENSMSIG00000024561 #11	Cpeb4 (ENSMSIG00000024456) #10	ENSMSIG00000024450	4930524B15Rik (ENSMSIG00000024432)	ENSMSIG00000024413	Il9r (ENSMSIG00000024354)	ENSMSIG00000024344	Rhbdf1 (ENSMSIG00000024323)	Mpg (ENSMSIG00000024316)	Nprl3 (ENSMSIG00000024256)	Hba-x (ENSMSIG00000024240)	ENSMSIG00000024228	ENSMSIG00000024204	Hbq1a (ENSMSIG00000023834)	Sh3pxd2b (ENSMSIG00000023801) #21	Ubtd2 (ENSMSIG00000023792) #22	Efcab9 (ENSMSIG00000023781) #23	Stk10 (ENSMSIG00000023716) #25	Fbxw11 (ENSMSIG00000023614)	Smim23 (ENSMSIG00000023592)	Fgf18 (ENSMSIG00000023572)	Npm1 (ENSMSIG00000023445)	Tlx3 (ENSMSIG00000023425)	ENSMSIG00000023419	Ranbp17 (ENSMSIG00000023281)	Gabrp (ENSMSIG00000023250)	ENSMSIG00000023232	Kcnip1 (ENSMSIG00000023156)	Kcnmb1 (ENSMSIG00000023135)	ENSMSIG00000022989	4930469K13Rik (ENSMSIG00000022972)
spretus	MODERN SPECIES	2	Erlec1 (MGP_SPRETEiJ_G0017012)	Chac2 (MGP_SPRETEiJ_G0017013)	Stc2 (MGP_SPRETEiJ_G0017014) #12	Bod1 (MGP_SPRETEiJ_G0017015) #11	Cpeb4 (MGP_SPRETEiJ_G0017016) #10	4930524B15Rik (MGP_SPRETEiJ_G0017017)	Nsg2 (MGP_SPRETEiJ_G0017018)	MGP_SPRETEiJ_G0017019	Il9r (MGP_SPRETEiJ_G0017020)	MGP_SPRETEiJ_G0017021	Rhbdf1 (MGP_SPRETEiJ_G0017022)	Nprl3 (MGP_SPRETEiJ_G0017023)	Mpg (MGP_SPRETEiJ_G0017024)	MGP_SPRETEiJ_G0017025	Sh3pxd2b (MGP_SPRETEiJ_G0017026) #21	Ubtd2 (MGP_SPRETEiJ_G0017027) #22	Efcab9 (MGP_SPRETEiJ_G0017028) #23	Stk10 (MGP_SPRETEiJ_G0017029) #25	Fbxw11 (MGP_SPRETEiJ_G0017030)	Smim23 (MGP_SPRETEiJ_G0017031)	Fgf18 (MGP_SPRETEiJ_G0017032)	Npm1 (MGP_SPRETEiJ_G0017033)	Tlx3 (MGP_SPRETEiJ_G0017034)	MGP_SPRETEiJ_G0017035	MGP_SPRETEiJ_G0017036	Gabrp (MGP_SPRETEiJ_G0017037)	MGP_SPRETEiJ_G0017038	Kcnip1 (MGP_SPRETEiJ_G0017039)	Kcnmb1 (MGP_SPRETEiJ_G0017040)	Lcp2 (MGP_SPRETEiJ_G0017041)	Foxi1 (MGP_SPRETEiJ_G0017042)
Mouse	MODERN SPECIES	2	Bod1 (ENSMUSG00000044502) #11	Cpeb4 (ENSMUSG00000020300) #10	4930524B15Rik (ENSMUSG00000020299)	Nsg2 (ENSMUSG00000020297)	Il9r (ENSMUSG00000020279)	Snrnp25 (ENSMUSG00000040767)	Rhbdf1 (ENSMUSG00000020282)	Nprl3 (ENSMUSG00000020289)	Mpg (ENSMUSG00000020287)	Hba-x (ENSMUSG00000055609)	Hba-a1 (ENSMUSG00000069919)	Hbq1b (ENSMUSG00000073063)	Hba-a2 (ENSMUSG00000069917)	Hbq1a (ENSMUSG00000020295)	Sh3pxd2b (ENSMUSG00000040711) #21	Ubtd2 (ENSMUSG00000044949) #22	Efcab9 (ENSMUSG00000044056) #23	Stk10 (ENSMUSG00000020272) #25	Fbxw11 (ENSMUSG00000020271)	Smim23 (ENSMUSG00000020270)	Fgf18 (ENSMUSG00000057967)	Npm1 (ENSMUSG00000057113)	Tlx3 (ENSMUSG00000040610)	Ranbp17 (ENSMUSG00000040594)	Gabrp (ENSMUSG00000020159)	Kcnip1 (ENSMUSG00000053519)	Kcnmb1 (ENSMUSG00000020155)	4930469K13Rik (ENSMUSG00000085684)	Lcp2 (ENSMUSG00000002699)	Foxi1 (ENSMUSG00000047861)	Dock2 (ENSMUSG00000020143)
Ryukyu mouse	MODERN SPECIES	2	Bod1 (MGP_CAROLIEiJ_G0016171) #11	Cpeb4 (MGP_CAROLIEiJ_G0016172) #10	4930524B15Rik (MGP_CAROLIEiJ_G0016173)	Nsg2 (MGP_CAROLIEiJ_G0016174)	Il9r (MGP_CAROLIEiJ_G0016175)	MGP_CAROLIEiJ_G0016176	Rhbdf1 (MGP_CAROLIEiJ_G0016177)	Nprl3 (MGP_CAROLIEiJ_G0016178)	Mpg (MGP_CAROLIEiJ_G0016179)	MGP_CAROLIEiJ_G0016180	MGP_CAROLIEiJ_G0016181	MGP_CAROLIEiJ_G0016182	MGP_CAROLIEiJ_G0016183	MGP_CAROLIEiJ_G0016184	Sh3pxd2b (MGP_CAROLIEiJ_G0016185) #21	Ubtd2 (MGP_CAROLIEiJ_G0016186) #22	Efcab9 (MGP_CAROLIEiJ_G0016187) #23	Stk10 (MGP_CAROLIEiJ_G0016188) #25	Fbxw11 (MGP_CAROLIEiJ_G0016189)	Smim23 (MGP_CAROLIEiJ_G0016190)	Fgf18 (MGP_CAROLIEiJ_G0016191)	Npm1 (MGP_CAROLIEiJ_G0016192)	Tlx3 (MGP_CAROLIEiJ_G0016193)	Ranbp17 (MGP_CAROLIEiJ_G0016194)	MGP_CAROLIEiJ_G0016195	Gabrp (MGP_CAROLIEiJ_G0016196)	MGP_CAROLIEiJ_G0016197	Kcnip1 (MGP_CAROLIEiJ_G0016198)	Kcnmb1 (MGP_CAROLIEiJ_G0016199)	Lcp2 (MGP_CAROLIEiJ_G0016200)	Foxi1 (MGP_CAROLIEiJ_G0016201)
Shrew mouse	MODERN SPECIES	5	Cpeb4 (MGP_PahariEiJ_G0017307) #10	4930524B15Rik (MGP_PahariEiJ_G0017308)	Nsg2 (MGP_PahariEiJ_G0017309)	MGP_PahariEiJ_G0017310	Il9r (MGP_PahariEiJ_G0017311)	MGP_PahariEiJ_G0017312	Rhbdf1 (MGP_PahariEiJ_G0017313)	Nprl3 (MGP_PahariEiJ_G0017314)	MGP_PahariEiJ_G0017315	MGP_PahariEiJ_G0017316	MGP_PahariEiJ_G0017317	MGP_PahariEiJ_G0017318	MGP_PahariEiJ_G0017319	MGP_PahariEiJ_G0017320	Sh3pxd2b (MGP_PahariEiJ_G0017321) #21	Ubtd2 (MGP_PahariEiJ_G0017322) #22	Efcab9 (MGP_PahariEiJ_G0017323) #23	Stk10 (MGP_PahariEiJ_G0017324) #25	Fbxw11 (MGP_PahariEiJ_G0017325)	Smim23 (MGP_PahariEiJ_G0017326)	Fgf18 (MGP_PahariEiJ_G0017327)	MGP_PahariEiJ_G0017328	Tlx3 (MGP_PahariEiJ_G0017329)	Ranbp17 (MGP_PahariEiJ_G0017330)	MGP_PahariEiJ_G0017331	Gabrp (MGP_PahariEiJ_G0017332)	MGP_PahariEiJ_G0017333	MGP_PahariEiJ_G0017334	Kcnmb1 (MGP_PahariEiJ_G0017335)	Lcp2 (MGP_PahariEiJ_G0017336)	Foxi1 (MGP_PahariEiJ_G0017337)
Rat	MODERN SPECIES	1	Snrnp25 (ENSRNOG00000020626)	Il9r (ENSRNOG00000020630)	Nsg2 (ENSRNOG00000020644)	RGD1311343 (ENSRNOG00000027852)	Cpeb4 (ENSRNOG00000033169) #10	Bod1 (ENSRNOG00000020717) #11	Stc2 (ENSRNOG00000020729) #12	Nkx2-5 (ENSRNOG00000020747) #13	Bnip1 (ENSRNOG00000020753) #14	Crebrf (ENSRNOG00000020769) #15	Atp6v0e1 (ENSRNOG00000003269) #16	Ergic1 (ENSRNOG00000003508) #18	ENSRNOG00000069024 #19	Neurl1b (ENSRNOG00000027606) #20	Sh3pxd2b (ENSRNOG00000004063) #21	Ubtd2 (ENSRNOG00000004137) #22	Efcab9 (ENSRNOG00000004142) #23	Stk10 (ENSRNOG00000004217) #25	ENSRNOG00000066039	Fbxw11 (ENSRNOG00000004395)	Smim23 (ENSRNOG00000027196)	Fgf18 (ENSRNOG00000048389)	Npm1 (ENSRNOG00000004616)	Tlx3 (ENSRNOG00000004976)	Ranbp17 (ENSRNOG00000005042)	Gabrp (ENSRNOG00000032417)	Kcnip1 (ENSRNOG00000005365)	AABR07029262.1 (ENSRNOG00000029706)	Kcnmb1 (ENSRNOG00000005465)	Lcp2 (ENSRNOG00000005620)	C10H5orf58 (ENSRNOG00000068310)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1546	Nsg2 (ENSNGAG00000013688)	4930524B15Rik (ENSNGAG00000012324)	Cpeb4 (ENSNGAG00000010735) #10	Bod1 (ENSNGAG00000006127) #11	ENSNGAG00000003484	Stc2 (ENSNGAG00000016574) #12	Nkx2-5 (ENSNGAG00000016164) #13	Bnip1 (ENSNGAG00000019475) #14	ENSNGAG00000009349 #15	ENSNGAG00000003294 #16	ENSNGAG00000002828 ##17	Ergic1 (ENSNGAG00000020608) #18	Dusp1 (ENSNGAG00000019520) #19	Neurl1b (ENSNGAG00000018472) #20	Sh3pxd2b (ENSNGAG00000000827) #21	Ubtd2 (ENSNGAG00000000104) #22	Efcab9 (ENSNGAG00000019506) #23	Stk10 (ENSNGAG00000019942) #25	Fbxw11 (ENSNGAG00000006880)	Smim23 (ENSNGAG00000001372)	Fgf18 (ENSNGAG00000001054)	ENSNGAG00000016679	Tlx3 (ENSNGAG00000011712)	Ranbp17 (ENSNGAG00000014221)	Gabrp (ENSNGAG00000017036)	Kcnip1 (ENSNGAG00000010312)	Kcnmb1 (ENSNGAG00000005867)	Lcp2 (ENSNGAG00000008561)	Foxi1 (ENSNGAG00000019108)	Insyn2b (ENSNGAG00000014504)
Lesser Egyptian jerboa	MODERN SPECIES	116	Drd1 (ENSJJAG00000014282)	Dusp1 (ENSJJAG00000010442) #19	Ergic1 (ENSJJAG00000006842) #18	ENSJJAG00000017961 #16	ENSJJAG00000017400 #15	ENSJJAG00000016719 #15	ENSJJAG00000016444 #14	Nkx2-5 (ENSJJAG00000015156) #13	Stc2 (ENSJJAG00000012335) #12	Bod1 (ENSJJAG00000007832) #11	Cpeb4 (ENSJJAG00000021518) #10	Nsg2 (ENSJJAG00000020822)	Msx2 (ENSJJAG00000016806)	Neurl1b (ENSJJAG00000016269) #20	Sh3pxd2b (ENSJJAG00000013982) #21	Ubtd2 (ENSJJAG00000010668) #22	Efcab9 (ENSJJAG00000009458) #23	Stk10 (ENSJJAG00000023041) #25	ENSJJAG00000021804	Smim23 (ENSJJAG00000017456)	Fgf18 (ENSJJAG00000016780)	ENSJJAG00000014455	Tlx3 (ENSJJAG00000010676)	Ranbp17 (ENSJJAG00000004292)	Gabrp (ENSJJAG00000024063)	Kcnip1 (ENSJJAG00000022582)	Kcnmb1 (ENSJJAG00000019472)	Lcp2 (ENSJJAG00000007933)	Foxi1 (ENSJJAG00000022048)
Kangaroo rat	MODERN SPECIES	431															Sh3pxd2b (ENSDORG00000003937) #21	Ubtd2 (ENSDORG00000026096) #22	Efcab9 (ENSDORG00000010658) #23	Stk10 (ENSDORG00000009303) #25	Fbxw11 (ENSDORG00000009769)	ENSDORG00000026619	Fgf18 (ENSDORG00000025835)	ENSDORG00000028337	Ranbp17 (ENSDORG00000001411)	Gabrp (ENSDORG00000012082)	Kcnip1 (ENSDORG00000008211)	Kcnmb1 (ENSDORG00000023698)	ENSDORG00000016444	Dock2 (ENSDORG00000006519)	Insyn2b (ENSDORG00000026025)	Spdl1 (ENSDORG00000006325)	Slit3 (ENSDORG00000024863)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Sciuridae	ANCESTRAL SPECIES	33	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Marmotini	ANCESTRAL SPECIES	38	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00390000010491.f.b	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316
Alpin marmot	MODERN SPECIES	31	SFXN1 (ENSMMMG00000009889)	DRD1 (ENSMMMG00000009915)	MSX2 (ENSMMMG00000009968)	NSG2 (ENSMMMG00000009989)	CPEB4 (ENSMMMG00000010044) #10	ENSMMMG00000010091 #11	STC2 (ENSMMMG00000010105) #12	NKX2-5 (ENSMMMG00000010122) #13	BNIP1 (ENSMMMG00000010131) #14	CREBRF (ENSMMMG00000010165) #15	RPL26L1 (ENSMMMG00000010196) #17	ERGIC1 (ENSMMMG00000010202) #18	ENSMMMG00000010217 #19	NEURL1B (ENSMMMG00000010222) #20	SH3PXD2B (ENSMMMG00000010235) #21	UBTD2 (ENSMMMG00000010264) #22	ENSMMMG00000010272 #23	STK10 (ENSMMMG00000010286) #25	FBXW11 (ENSMMMG00000010309)	SMIM23 (ENSMMMG00000010399)	ENSMMMG00000010418	ENSMMMG00000010435	TLX3 (ENSMMMG00000010459)	RANBP17 (ENSMMMG00000010468)	GABRP (ENSMMMG00000010504)	KCNIP1 (ENSMMMG00000010524)	ENSMMMG00000010588	KCNMB1 (ENSMMMG00000010599)	LCP2 (ENSMMMG00000010608)	C5orf58 (ENSMMMG00000010701)	FOXI1 (ENSMMMG00000010708)
Marmotini_b	ANCESTRAL SPECIES	127	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.b.b.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00390000010491.f.b	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316
Squirrel	MODERN SPECIES	209	DRD1 (ENSSTOG00000029229)	MSX2 (ENSSTOG00000000399)	NSG2 (ENSSTOG00000011148)	CPEB4 (ENSSTOG00000020645) #10	ENSSTOG00000030887 #11	STC2 (ENSSTOG00000004413) #12	NKX2-5 (ENSSTOG00000004407) #13	BNIP1 (ENSSTOG00000004393) #14	CREBRF (ENSSTOG00000004368) #15	ATP6V0E1 (ENSSTOG00000025255) #16	RPL26L1 (ENSSTOG00000026876) #17	ERGIC1 (ENSSTOG00000025246) #18	DUSP1 (ENSSTOG00000023698) #19	NEURL1B (ENSSTOG00000025420) #20	SH3PXD2B (ENSSTOG00000028124) #21	UBTD2 (ENSSTOG00000014298) #22	EFCAB9 (ENSSTOG00000020218) #23	STK10 (ENSSTOG00000026208) #25	FBXW11 (ENSSTOG00000023506)	SMIM23 (ENSSTOG00000024706)	FGF18 (ENSSTOG00000023666)	ENSSTOG00000014732	TLX3 (ENSSTOG00000026927)	RANBP17 (ENSSTOG00000014700)	ENSSTOG00000014692	KCNIP1 (ENSSTOG00000004193)	KCNMB1 (ENSSTOG00000021835)	LCP2 (ENSSTOG00000016525)	FOXI1 (ENSSTOG00000016524)	DOCK2 (ENSSTOG00000028655)	INSYN2B (ENSSTOG00000016521)
Arctic ground squirrel	MODERN SPECIES	242							STC2 (ENSUPAG00010022254) #12	NKX2-5 (ENSUPAG00010022252) #13	BNIP1 (ENSUPAG00010022250) #14	CREBRF (ENSUPAG00010022247) #15	ATP6V0E1 (ENSUPAG00010022244) #16	RPL26L1 (ENSUPAG00010022239) #17	ERGIC1 (ENSUPAG00010022238) #18	NEURL1B (ENSUPAG00010022219) #20	SH3PXD2B (ENSUPAG00010022216) #21	UBTD2 (ENSUPAG00010022213) #22	EFCAB9 (ENSUPAG00010022210) #23	STK10 (ENSUPAG00010022207) #25	ENSUPAG00010022184	SMIM23 (ENSUPAG00010022182)	FGF18 (ENSUPAG00010022179)	NPM1 (ENSUPAG00010022177)	TLX3 (ENSUPAG00010022175)	RANBP17 (ENSUPAG00010022169)	GABRP (ENSUPAG00010022164)	KCNIP1 (ENSUPAG00010022160)	ENSUPAG00010022158	KCNMB1 (ENSUPAG00010022156)	LCP2 (ENSUPAG00010022148)	C5orf58 (ENSUPAG00010022147)	FOXI1 (ENSUPAG00010022146)
Eurasian red squirrel	MODERN SPECIES	15	MSX2 (ENSSVLG00005012101)	NSG2 (ENSSVLG00005012146)	C5orf47 (ENSSVLG00005012218)	CPEB4 (ENSSVLG00005012332) #10	ENSSVLG00005012611 #11	STC2 (ENSSVLG00005012797) #12	NKX2-5 (ENSSVLG00005012867) #13	BNIP1 (ENSSVLG00005012932) #14	CREBRF (ENSSVLG00005013005) #15	ATP6V0E1 (ENSSVLG00005013162) #16	RPL26L1 (ENSSVLG00005013228) #17	ERGIC1 (ENSSVLG00005013430) #18	DUSP1 (ENSSVLG00005013587) #19	NEURL1B (ENSSVLG00005013785) #20	SH3PXD2B (ENSSVLG00005013894) #21	UBTD2 (ENSSVLG00005013934) #22	EFCAB9 (ENSSVLG00005013993) #23	STK10 (ENSSVLG00005014068) #25	FBXW11 (ENSSVLG00005014207)	FGF18 (ENSSVLG00005014519)	ENSSVLG00005014590	TLX3 (ENSSVLG00005014955)	RANBP17 (ENSSVLG00005015018)	GABRP (ENSSVLG00005015323)	KCNIP1 (ENSSVLG00005015593)	KCNMB1 (ENSSVLG00005015902)	LCP2 (ENSSVLG00005015956)	C5orf58 (ENSSVLG00005016377)	FOXI1 (ENSSVLG00005016401)	DOCK2 (ENSSVLG00005016455)	INSYN2B (ENSSVLG00005016909)
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Hystricomorpha_a	ANCESTRAL SPECIES	28	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Guinea pig	MODERN SPECIES	17	DRD1 (ENSCPOG00000039492)	MSX2 (ENSCPOG00000038944)	NSG2 (ENSCPOG00000037038)	CPEB4 (ENSCPOG00000015530) #10	ENSCPOG00000026033 #11	STC2 (ENSCPOG00000034039) #12	NKX2-5 (ENSCPOG00000026347) #13	BNIP1 (ENSCPOG00000006752) #14	CREBRF (ENSCPOG00000014384) #15	ATP6V0E1 (ENSCPOG00000040227) #16	RPL26L1 (ENSCPOG00000012188) #17	ERGIC1 (ENSCPOG00000012183) #18	DUSP1 (ENSCPOG00000013344) #19	NEURL1B (ENSCPOG00000040777) #20	SH3PXD2B (ENSCPOG00000039072) #21	UBTD2 (ENSCPOG00000034425) #22	EFCAB9 (ENSCPOG00000026758) #23	STK10 (ENSCPOG00000006502) #25	FBXW11 (ENSCPOG00000009582)	SMIM23 (ENSCPOG00000006672)	FGF18 (ENSCPOG00000006088)	TLX3 (ENSCPOG00000024190)	ENSCPOG00000032195	RANBP17 (ENSCPOG00000005628)	GABRP (ENSCPOG00000039299)	KCNIP1 (ENSCPOG00000014295)	KCNMB1 (ENSCPOG00000036105)	LCP2 (ENSCPOG00000002851)	FOXI1 (ENSCPOG00000019611)	INSYN2B (ENSCPOG00000010850)	DOCK2 (ENSCPOG00000010822)
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Long-tailed chinchilla	MODERN SPECIES	115	MSX2 (ENSCLAG00000014001)	NSG2 (ENSCLAG00000014316)	CPEB4 (ENSCLAG00000013156) #10	ENSCLAG00000016125 #11	ENSCLAG00000014408	STC2 (ENSCLAG00000013045) #12	NKX2-5 (ENSCLAG00000013992) #13	BNIP1 (ENSCLAG00000015919) #14	CREBRF (ENSCLAG00000014588) #15	ATP6V0E1 (ENSCLAG00000014664) #16	RPL26L1 (ENSCLAG00000014524) #17	ERGIC1 (ENSCLAG00000014304) #18	DUSP1 (ENSCLAG00000013473) #19	NEURL1B (ENSCLAG00000014210) #20	SH3PXD2B (ENSCLAG00000015389) #21	UBTD2 (ENSCLAG00000015134) #22	EFCAB9 (ENSCLAG00000013040) #23	STK10 (ENSCLAG00000015147) #25	FBXW11 (ENSCLAG00000013691)	SMIM23 (ENSCLAG00000012177)	FGF18 (ENSCLAG00000013051)	ENSCLAG00000014392	TLX3 (ENSCLAG00000013094)	RANBP17 (ENSCLAG00000013185)	GABRP (ENSCLAG00000012510)	KCNIP1 (ENSCLAG00000013854)	KCNMB1 (ENSCLAG00000014418)	LCP2 (ENSCLAG00000015940)	FOXI1 (ENSCLAG00000014060)	INSYN2B (ENSCLAG00000013576)	DOCK2 (ENSCLAG00000014012)
Degu	MODERN SPECIES	253	NSG2 (ENSODEG00000001862)	CPEB4 (ENSODEG00000001934) #10	ENSODEG00000001973 #11	ENSODEG00000002042	ENSODEG00000018739	STC2 (ENSODEG00000002102) #12	NKX2-5 (ENSODEG00000002184) #13	BNIP1 (ENSODEG00000002196) #14	CREBRF (ENSODEG00000002364) #15	ATP6V0E1 (ENSODEG00000001083) #16	ERGIC1 (ENSODEG00000001101) #18	DUSP1 (ENSODEG00000001126) #19	NEURL1B (ENSODEG00000001134) #20	ENSODEG00000001166	SH3PXD2B (ENSODEG00000001294) #21	UBTD2 (ENSODEG00000001390) #22	EFCAB9 (ENSODEG00000001416) #23	STK10 (ENSODEG00000001477) #25	FBXW11 (ENSODEG00000001754)	SMIM23 (ENSODEG00000001818)
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000049916	C5orf47 (ENSHGLG00000040572)	CPEB4 (ENSHGLG00000008897) #10	ENSHGLG00000041881 #11	STC2 (ENSHGLG00000017592) #12	NKX2-5 (ENSHGLG00000017269) #13	BNIP1 (ENSHGLG00000018031) #14	ENSHGLG00000017817 #15	ENSHGLG00000021190	ENSHGLG00000018219 #16	ENSHGLG00000017100	ERGIC1 (ENSHGLG00000050911) #18	DUSP1 (ENSHGLG00000012633) #19	NEURL1B (ENSHGLG00000039883) #20	SH3PXD2B (ENSHGLG00000009542) #21	UBTD2 (ENSHGLG00000044520) #22	EFCAB9 (ENSHGLG00000006358) #23	STK10 (ENSHGLG00000007426) #25	ENSHGLG00000048340	FBXW11 (ENSHGLG00000010874)	ENSHGLG00000032517	SMIM23 (ENSHGLG00000009367)	ENSHGLG00000040705	FGF18 (ENSHGLG00000049396)	NPM1 (ENSHGLG00000013669)	ENSHGLG00000015459	TLX3 (ENSHGLG00000014254)	RANBP17 (ENSHGLG00000014605)	ENSHGLG00000035784	GABRP (ENSHGLG00000033733)	KCNIP1 (ENSHGLG00000013570)
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156641 #22
Common shrew	MODERN SPECIES	8720																UBTD2 (ENSSARG00000004915) #22
Hedgehog	MODERN SPECIES	6321																UBTD2 (ENSEEUG00000005461) #22
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Megabat	MODERN SPECIES	2086															SH3PXD2B (ENSPVAG00000001582) #21	UBTD2 (ENSPVAG00000001581) #22
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Microbat	MODERN SPECIES	1479														NEURL1B (ENSMLUG00000026971) #20	ENSMLUG00000015005 #21	UBTD2 (ENSMLUG00000003394) #22	EFCAB9 (ENSMLUG00000030111) #23	STK10 (ENSMLUG00000006311) #25	FBXW11 (ENSMLUG00000006302)
Greater horseshoe bat	MODERN SPECIES	16	MSX2 (ENSRFEG00010007947)	NSG2 (ENSRFEG00010007915)	C5orf47 (ENSRFEG00010007860)	CPEB4 (ENSRFEG00010007464) #10	ENSRFEG00010007368 #11	STC2 (ENSRFEG00010007301) #12	NKX2-5 (ENSRFEG00010007273) #13	BNIP1 (ENSRFEG00010007189) #14	CREBRF (ENSRFEG00010007123) #15	ENSRFEG00010007076 #16	RPL26L1 (ENSRFEG00010007037) #17	ERGIC1 (ENSRFEG00010006938) #18	DUSP1 (ENSRFEG00010006882) #19	NEURL1B (ENSRFEG00010006802) #20	SH3PXD2B (ENSRFEG00010006731) #21	UBTD2 (ENSRFEG00010006696) #22	EFCAB9 (ENSRFEG00010006675) #23	STK10 (ENSRFEG00010006622) #25	FBXW11 (ENSRFEG00010006429)	FGF18 (ENSRFEG00010006277)	ENSRFEG00010006113	TLX3 (ENSRFEG00010005948)	RANBP17 (ENSRFEG00010005910)	ENSRFEG00010005874	GABRP (ENSRFEG00010005792)	KCNMB1 (ENSRFEG00010020917)	KCNIP1 (ENSRFEG00010020846)	LCP2 (ENSRFEG00010020758)	C5orf58 (ENSRFEG00010020729)	FOXI1 (ENSRFEG00010020710)	INSYN2B (ENSRFEG00010020694)
Equus	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00950000183120.e.b.a.a.b.b.a.b	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.w	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316
Donkey	MODERN SPECIES	29	DRD1 (ENSEASG00005026731)	MSX2 (ENSEASG00005036074)	ENSEASG00005025007	CPEB4 (ENSEASG00005011952) #10	ENSEASG00005011948 #11	STC2 (ENSEASG00005024262) #12	NKX2-5 (ENSEASG00005011942) #13	BNIP1 (ENSEASG00005027404) #14	CREBRF (ENSEASG00005011938) #15	ATP6V0E1 (ENSEASG00005011936) #16	RPL26L1 (ENSEASG00005011935) #17	ERGIC1 (ENSEASG00005011934) #18	DUSP1 (ENSEASG00005011932) #19	NEURL1B (ENSEASG00005028285) #20	SH3PXD2B (ENSEASG00005011927) #21	UBTD2 (ENSEASG00005028770) #22	EFCAB9 (ENSEASG00005011925) #23	STK10 (ENSEASG00005011922) #25	FBXW11 (ENSEASG00005011915)	SMIM23 (ENSEASG00005024362)	ENSEASG00005011908	FGF18 (ENSEASG00005033570)	ENSEASG00005011903	TLX3 (ENSEASG00005011900)	RANBP17 (ENSEASG00005010605)	GABRP (ENSEASG00005013457)	KCNIP1 (ENSEASG00005013452)	KCNMB1 (ENSEASG00005013450)	LCP2 (ENSEASG00005013437)	C5orf58 (ENSEASG00005025476)	FOXI1 (ENSEASG00005036642)
Horse	MODERN SPECIES	5	MSX2 (ENSECAG00000011749)	NSG2 (ENSECAG00000013801)	C14H5orf47 (ENSECAG00000015624)	CPEB4 (ENSECAG00000016921) #10	ENSECAG00000021784 #11	STC2 (ENSECAG00000022263) #12	NKX2-5 (ENSECAG00000023495) #13	BNIP1 (ENSECAG00000023543) #14	CREBRF (ENSECAG00000024559) #15	RPL26L1 (ENSECAG00000000869) #16	ENSECAG00000059561 ##17	ERGIC1 (ENSECAG00000007541) #18	DUSP1 (ENSECAG00000009958) #19	NEURL1B (ENSECAG00000039619) #20	SH3PXD2B (ENSECAG00000009968) #21	UBTD2 (ENSECAG00000038912) #22	EFCAB9 (ENSECAG00000015586) #23	STK10 (ENSECAG00000016265) #25	FBXW11 (ENSECAG00000011756)	SMIM23 (ENSECAG00000018524)	ENSECAG00000049830	ENSECAG00000003655	FGF18 (ENSECAG00000030850)	NPM1 (ENSECAG00000021950)	TLX3 (ENSECAG00000007840)	RANBP17 (ENSECAG00000008393)	GABRP (ENSECAG00000014418)	ENSECAG00000050403	KCNIP1 (ENSECAG00000019400)	KCNMB1 (ENSECAG00000021360)	LCP2 (ENSECAG00000021603)
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Ursidae	ANCESTRAL SPECIES	24	ENSGT00390000000483.a.a	ENSGT00940000167072	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.a.b.b.b ##17	ENSGT00390000014165.d ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501.a #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00510000047951
Ursus	ANCESTRAL SPECIES	10	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00940000167072	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.d ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501.a #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000161316	ENSGT01100000266992	ENSGT00510000047951
Polar bear	MODERN SPECIES	179	CPLX2 (ENSUMAG00000024512)	HRH2 (ENSUMAG00000024513)	SFXN1 (ENSUMAG00000024515)	DRD1 (ENSUMAG00000024516)	MSX2 (ENSUMAG00000024517)	ENSUMAG00000024518	CPEB4 (ENSUMAG00000024519) #10	STC2 (ENSUMAG00000024523) #12	BNIP1 (ENSUMAG00000024525) #14	CREBRF (ENSUMAG00000024526) #15	ATP6V0E1 (ENSUMAG00000024527) #16	ENSUMAG00000024528 ##17	ERGIC1 (ENSUMAG00000024529) #18	DUSP1 (ENSUMAG00000024530) #19	SH3PXD2B (ENSUMAG00000024532) #21	UBTD2 (ENSUMAG00000024535) #22	EFCAB9 (ENSUMAG00000024536) #23	STK10 (ENSUMAG00000024537) #25	FBXW11 (ENSUMAG00000024650)	SMIM23 (ENSUMAG00000024651)	FGF18 (ENSUMAG00000024652)	ENSUMAG00000024653	RANBP17 (ENSUMAG00000024660)	GABRP (ENSUMAG00000024666)	KCNIP1 (ENSUMAG00000024667)	KCNMB1 (ENSUMAG00000024668)	LCP2 (ENSUMAG00000024670)	FOXI1 (ENSUMAG00000024672)	ENSUMAG00000024673	DOCK2 (ENSUMAG00000024674)	INSYN2B (ENSUMAG00000024676)
American black bear	MODERN SPECIES	2323																UBTD2 (ENSUAMG00000000133) #22	EFCAB9 (ENSUAMG00000000052) #23	STK10 (ENSUAMG00000022984) #25
Giant Panda	MODERN SPECIES	13	MSX2 (ENSAMEG00000011380)	NSG2 (ENSAMEG00000011368)	ENSAMEG00000025521	CPEB4 (ENSAMEG00000011342) #10	ENSAMEG00000011333 #11	STC2 (ENSAMEG00000011326) #12	BNIP1 (ENSAMEG00000011310) #14	NKX2-5 (ENSAMEG00000028084) #13	CREBRF (ENSAMEG00000011290) #15	ATP6V0E1 (ENSAMEG00000029545) #16	ENSAMEG00000011270 ##17	ERGIC1 (ENSAMEG00000011244) #18	DUSP1 (ENSAMEG00000011224) #19	NEURL1B (ENSAMEG00000011213) #20	SH3PXD2B (ENSAMEG00000027237) #21	UBTD2 (ENSAMEG00000011190) #22	ENSAMEG00000011187 #23	STK10 (ENSAMEG00000011144) #25	FBXW11 (ENSAMEG00000011107)	SMIM23 (ENSAMEG00000027396)	FGF18 (ENSAMEG00000027271)	ENSAMEG00000003910	TLX3 (ENSAMEG00000003951)	RANBP17 (ENSAMEG00000003955)	GABRP (ENSAMEG00000003979)	KCNIP1 (ENSAMEG00000003998)	KCNMB1 (ENSAMEG00000030560)	LCP2 (ENSAMEG00000004097)	C5orf58 (ENSAMEG00000023780)	FOXI1 (ENSAMEG00000001516)	DOCK2 (ENSAMEG00000008771)
Mustelinae	ANCESTRAL SPECIES	13	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Ferret	MODERN SPECIES	162	MSX2 (ENSMPUG00000012673)	NSG2 (ENSMPUG00000012677)	C5orf47 (ENSMPUG00000012685)	CPEB4 (ENSMPUG00000012687) #10	ENSMPUG00000012689	ENSMPUG00000012693 #11	STC2 (ENSMPUG00000012704) #12	NKX2-5 (ENSMPUG00000012707) #13	BNIP1 (ENSMPUG00000012710) #14	CREBRF (ENSMPUG00000012726) #15	RPL26L1 (ENSMPUG00000012729) #17	ERGIC1 (ENSMPUG00000012743) #18	DUSP1 (ENSMPUG00000012746) #19	NEURL1B (ENSMPUG00000012751) #20	SH3PXD2B (ENSMPUG00000012754) #21	UBTD2 (ENSMPUG00000012758) #22	EFCAB9 (ENSMPUG00000012759) #23	STK10 (ENSMPUG00000012761) #25	ENSMPUG00000012767	FBXW11 (ENSMPUG00000012769)	ENSMPUG00000012839	SMIM23 (ENSMPUG00000012844)	FGF18 (ENSMPUG00000012855)	ENSMPUG00000012858	TLX3 (ENSMPUG00000012862)	RANBP17 (ENSMPUG00000012874)	GABRP (ENSMPUG00000012885)	KCNIP1 (ENSMPUG00000012891)	KCNMB1 (ENSMPUG00000012894)	LCP2 (ENSMPUG00000012897)	FOXI1 (ENSMPUG00000012982)
American mink	MODERN SPECIES	101	MSX2 (ENSNVIG00000021793)	NSG2 (ENSNVIG00000021801)	C5orf47 (ENSNVIG00000021820)	CPEB4 (ENSNVIG00000021827) #10	ENSNVIG00000021892 #11	STC2 (ENSNVIG00000021901) #12	NKX2-5 (ENSNVIG00000021910) #13	SEC20 (ENSNVIG00000021912) #14	CREBRF (ENSNVIG00000021945) #15	ATP6V0E1 (ENSNVIG00000021974) #16	RPL26L1 (ENSNVIG00000022013) #17	ERGIC1 (ENSNVIG00000022026) #18	DUSP1 (ENSNVIG00000022051) #19	NEURL1B (ENSNVIG00000022058) #20	SH3PXD2B (ENSNVIG00000022076) #21	UBTD2 (ENSNVIG00000022111) #22	EFCAB9 (ENSNVIG00000022124) #23	STK10 (ENSNVIG00000022143) #25	FBXW11 (ENSNVIG00000022157)	FGF18 (ENSNVIG00000022241)	ENSNVIG00000022254	TLX3 (ENSNVIG00000022330)	RANBP17 (ENSNVIG00000022334)	GABRP (ENSNVIG00000022383)	KCNIP1 (ENSNVIG00000022447)	KCNMB1 (ENSNVIG00000022481)	LCP2 (ENSNVIG00000022495)	C5orf58 (ENSNVIG00000022567)	FOXI1 (ENSNVIG00000022570)	DOCK2 (ENSNVIG00000022575)	INSYN2B (ENSNVIG00000022610)
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00390000008496.i.a	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.fb #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Red fox	MODERN SPECIES	2	ENSVVUG00000002012	CPEB4 (ENSVVUG00000002022) #10	ENSVVUG00000002062	ENSVVUG00000002071 #11	STC2 (ENSVVUG00000002084) #12	NKX2-5 (ENSVVUG00000002086) #13	BNIP1 (ENSVVUG00000002123) #14	ENSVVUG00000002168	CREBRF (ENSVVUG00000002198) #15	ATP6V0E1 (ENSVVUG00000002213) #16	ENSVVUG00000002223 ##17	ERGIC1 (ENSVVUG00000002261) #18	DUSP1 (ENSVVUG00000002297) #19	ENSVVUG00000002314 #20	SH3PXD2B (ENSVVUG00000002354) #21	UBTD2 (ENSVVUG00000002372) #22	EFCAB9 (ENSVVUG00000002399) #23	STK10 (ENSVVUG00000002418) #25	FBXW11 (ENSVVUG00000002484)	SMIM23 (ENSVVUG00000002597)	FGF18 (ENSVVUG00000002630)	ENSVVUG00000002639	TLX3 (ENSVVUG00000002648)	RANBP17 (ENSVVUG00000002668)	ENSVVUG00000002726	GABRP (ENSVVUG00000002730)	KCNIP1 (ENSVVUG00000002751)	KCNMB1 (ENSVVUG00000002761)	LCP2 (ENSVVUG00000002768)	FOXI1 (ENSVVUG00000002797)	DOCK2 (ENSVVUG00000002823)
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00390000008496.i.a	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.fb #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Dingo	MODERN SPECIES	324	MSX2 (ENSCAFG00020011431)	NSG2 (ENSCAFG00020011410)	C5orf47 (ENSCAFG00020011376)	CPEB4 (ENSCAFG00020011285) #10	ENSCAFG00020011279	ENSCAFG00020011274 #11	STC2 (ENSCAFG00020011270) #12	NKX2-5 (ENSCAFG00020011268) #13	BNIP1 (ENSCAFG00020011264) #14	CREBRF (ENSCAFG00020011261) #15	ENSCAFG00020011259 #16	ERGIC1 (ENSCAFG00020011256) #18	DUSP1 (ENSCAFG00020011252) #19	NEURL1B (ENSCAFG00020011251) #20	SH3PXD2B (ENSCAFG00020011225) #21	UBTD2 (ENSCAFG00020011220) #22	STK10 (ENSCAFG00020009145) #25	FBXW11 (ENSCAFG00020008756)	FGF18 (ENSCAFG00020008729)	ENSCAFG00020008713	TLX3 (ENSCAFG00020008709)	ENSCAFG00020008705	RANBP17 (ENSCAFG00020005518)	GABRP (ENSCAFG00020005355)	KCNIP1 (ENSCAFG00020005302)	KCNMB1 (ENSCAFG00020005273)	LCP2 (ENSCAFG00020005197)	FOXI1 (ENSCAFG00020005155)	INSYN2B (ENSCAFG00020005151)	DOCK2 (ENSCAFG00020004726)	SPDL1 (ENSCAFG00020004634)
Dog	MODERN SPECIES	32	MSX2 (ENSCAFG00845000450)	CPEB4 (ENSCAFG00845000467)	C5orf47 (ENSCAFG00845000487)	CPEB4 (ENSCAFG00845000511) #10	ENSCAFG00845000535	ENSCAFG00845000564 #11	STC2 (ENSCAFG00845000605) #12	NKX2-5 (ENSCAFG00845000634) #13	BNIP1 (ENSCAFG00845000706) #14	CREBRF (ENSCAFG00845000727) #15	ATP6V0E1 (ENSCAFG00845000758) #16	ERGIC1 (ENSCAFG00845000852) #18	DUSP1 (ENSCAFG00845000953) #19	NEURL1B (ENSCAFG00845000993) #20	SH3PXD2B (ENSCAFG00845001080) #21	UBTD2 (ENSCAFG00845001180) #22	EFCAB9 (ENSCAFG00845001213) #23	STK10 (ENSCAFG00845001258) #25	FBXW11 (ENSCAFG00845001422)	SMIM23 (ENSCAFG00845001607)	ENSCAFG00845001623	FGF18 (ENSCAFG00845001658)	NPM1 (ENSCAFG00845001853)	TLX3 (ENSCAFG00845001907)	RANBP17 (ENSCAFG00845002032)	GABRP (ENSCAFG00845002228)	KCNIP1 (ENSCAFG00845002324)	KCNMB1 (ENSCAFG00845002523)	LCP2 (ENSCAFG00845002557)	C5orf58 (ENSCAFG00845002585)	FOXI1 (ENSCAFG00845002600)
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Cat	MODERN SPECIES		MSX2 (ENSFCAG00000033871)	NSG2 (ENSFCAG00000022137)	ENSFCAG00000041207	CPEB4 (ENSFCAG00000031504) #10	ENSFCAG00000021908 #11	STC2 (ENSFCAG00000046627) #12	NKX2-5 (ENSFCAG00000000539) #13	BNIP1 (ENSFCAG00000000536) #14	CREBRF (ENSFCAG00000000534) #15	ATP6V0E1 (ENSFCAG00000031789) #16	RPL26L1 (ENSFCAG00000026949) #17	ERGIC1 (ENSFCAG00000011258) #18	DUSP1 (ENSFCAG00000037697) #19	NEURL1B (ENSFCAG00000031157) #20	SH3PXD2B (ENSFCAG00000038295) #21	UBTD2 (ENSFCAG00000044346) #22	EFCAB9 (ENSFCAG00000016235) #23	STK10 (ENSFCAG00000000434) #25	FBXW11 (ENSFCAG00000027834)	SMIM23 (ENSFCAG00000044613)	FGF18 (ENSFCAG00000007079)	NPM1 (ENSFCAG00000030268)	TLX3 (ENSFCAG00000035960)	RANBP17 (ENSFCAG00000024510)	GABRP (ENSFCAG00000003782)	KCNIP1 (ENSFCAG00000031673)	KCNMB1 (ENSFCAG00000036866)	LCP2 (ENSFCAG00000000836)	ENSFCAG00000046620	FOXI1 (ENSFCAG00000000835)	DOCK2 (ENSFCAG00000000834)
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Tiger	MODERN SPECIES	88													DUSP1 (ENSPTIG00000021330) #19	ENSPTIG00000021333 #20	SH3PXD2B (ENSPTIG00000021346) #21	UBTD2 (ENSPTIG00000021417) #22	EFCAB9 (ENSPTIG00000021425) #23	STK10 (ENSPTIG00000021431) #25	FBXW11 (ENSPTIG00000021490)	SMIM23 (ENSPTIG00000021545)	FGF18 (ENSPTIG00000021564)	ENSPTIG00000021568	RANBP17 (ENSPTIG00000021586)	GABRP (ENSPTIG00000021600)
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
lion	MODERN SPECIES		MSX2 (ENSPLOG00000014575)	NSG2 (ENSPLOG00000014484)	C5orf47 (ENSPLOG00000014426)	CPEB4 (ENSPLOG00000014177) #10	ENSPLOG00000014087 #11	STC2 (ENSPLOG00000014037) #12	NKX2-5 (ENSPLOG00000014000) #13	BNIP1 (ENSPLOG00000013932) #14	CREBRF (ENSPLOG00000013863) #15	ATP6V0E1 (ENSPLOG00000013764) #16	RPL26L1 (ENSPLOG00000013719) #17	ERGIC1 (ENSPLOG00000013645) #18	DUSP1 (ENSPLOG00000013584) #19	NEURL1B (ENSPLOG00000013404) #20	SH3PXD2B (ENSPLOG00000013192) #21	UBTD2 (ENSPLOG00000013141) #22	EFCAB9 (ENSPLOG00000013080) #23	STK10 (ENSPLOG00000013044) #25	FBXW11 (ENSPLOG00000012707)	FGF18 (ENSPLOG00000012527)	ENSPLOG00000012460	TLX3 (ENSPLOG00000012406)	RANBP17 (ENSPLOG00000012173)	GABRP (ENSPLOG00000011935)	KCNMB1 (ENSPLOG00000011886)	KCNIP1 (ENSPLOG00000011622)	LCP2 (ENSPLOG00000011278)	C5orf58 (ENSPLOG00000011213)	FOXI1 (ENSPLOG00000011159)	INSYN2B (ENSPLOG00000011126)	DOCK2 (ENSPLOG00000010942)
leopard	MODERN SPECIES	18	DRD1 (ENSPPRG00000019529)	MSX2 (ENSPPRG00000023106)	NSG2 (ENSPPRG00000000307)	CPEB4 (ENSPPRG00000001603) #10	ENSPPRG00000003207 #11	STC2 (ENSPPRG00000003601) #12	NKX2-5 (ENSPPRG00000004094) #13	BNIP1 (ENSPPRG00000005455) #14	CREBRF (ENSPPRG00000005970) #15	ATP6V0E1 (ENSPPRG00000006470) #16	RPL26L1 (ENSPPRG00000006918) #17	ERGIC1 (ENSPPRG00000008276) #18	DUSP1 (ENSPPRG00000008559) #19	NEURL1B (ENSPPRG00000009165) #20	SH3PXD2B (ENSPPRG00000009689) #21	UBTD2 (ENSPPRG00000010187) #22	EFCAB9 (ENSPPRG00000011345) #23	STK10 (ENSPPRG00000011731) #25	FBXW11 (ENSPPRG00000012730)	SMIM23 (ENSPPRG00000013401)	FGF18 (ENSPPRG00000013778)	ENSPPRG00000014990	TLX3 (ENSPPRG00000015978)	RANBP17 (ENSPPRG00000019041)	GABRP (ENSPPRG00000025082)	KCNMB1 (ENSPPRG00000025063)	KCNIP1 (ENSPPRG00000024956)	LCP2 (ENSPPRG00000024344)	C5orf58 (ENSPPRG00000024140)	FOXI1 (ENSPPRG00000024120)	INSYN2B (ENSPPRG00000024086)
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Suina	ANCESTRAL SPECIES	25	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a.a #16	ENSGT00390000014165.c.b #17	ENSGT00900000143489	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Pig	MODERN SPECIES	7	C5orf47 (ENSSSCG00000035512)	CPEB4 (ENSSSCG00000016981) #10	ENSSSCG00000016982 #11	STC2 (ENSSSCG00000016983) #12	NKX2-5 (ENSSSCG00000036285) #13	BNIP1 (ENSSSCG00000016985) #14	CREBRF (ENSSSCG00000016986) #15	ENSSSCG00000016990 #16	RPL26L1 (ENSSSCG00000016989) #17	ENSSSCG00000035845	ERGIC1 (ENSSSCG00000016988) #18	ENSSSCG00000056851	DUSP1 (ENSSSCG00000016991) #19	NEURL1B (ENSSSCG00000016992) #20	SH3PXD2B (ENSSSCG00000027378) #21	UBTD2 (ENSSSCG00000023948) #22	EFCAB9 (ENSSSCG00000016995) #23	STK10 (ENSSSCG00000022478) #25	FBXW11 (ENSSSCG00000023307)	ENSSSCG00000023757	FGF18 (ENSSSCG00000016997)	ENSSSCG00000016998	TLX3 (ENSSSCG00000016999)	RANBP17 (ENSSSCG00000017000)	GABRP (ENSSSCG00000021902)	KCNIP1 (ENSSSCG00000017003)	KCNMB1 (ENSSSCG00000017005)	LCP2 (ENSSSCG00000017006)	C5orf58 (ENSSSCG00000051265)	FOXI1 (ENSSSCG00000017009)	DOCK2 (ENSSSCG00000017008)
Chacoan peccary	MODERN SPECIES	97			CPEB4 (ENSCWAG00000000128) #10	ENSCWAG00000000497 #11	STC2 (ENSCWAG00000000525) #12	NKX2-5 (ENSCWAG00000000540) #13	BNIP1 (ENSCWAG00000000552) #14	CREBRF (ENSCWAG00000000582) #15	ENSCWAG00000000600 #16	RPL26L1 (ENSCWAG00000000616) #17	ENSCWAG00000000627	ERGIC1 (ENSCWAG00000000647) #18	DUSP1 (ENSCWAG00000000695) #19	NEURL1B (ENSCWAG00000000720) #20	SH3PXD2B (ENSCWAG00000000790) #21	UBTD2 (ENSCWAG00000000837) #22	EFCAB9 (ENSCWAG00000000850) #23	STK10 (ENSCWAG00000000878) #25	FBXW11 (ENSCWAG00000000944)	FGF18 (ENSCWAG00000001037)	NPM1 (ENSCWAG00000001072)	TLX3 (ENSCWAG00000001128)	RANBP17 (ENSCWAG00000001156)	GABRP (ENSCWAG00000001221)	KCNIP1 (ENSCWAG00000001291)	KCNMB1 (ENSCWAG00000001422)	LCP2 (ENSCWAG00000001455)	C5orf58 (ENSCWAG00000001565)	FOXI1 (ENSCWAG00000001576)	DOCK2 (ENSCWAG00000001602)	INSYN2B (ENSCWAG00000001704)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Pecora	ANCESTRAL SPECIES	25	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Percora_a	ANCESTRAL SPECIES	26	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Bovidae	ANCESTRAL SPECIES	26	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Bovinae	ANCESTRAL SPECIES	25	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00420000029792.d	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT01000000218258	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
American bison	MODERN SPECIES	3215						STC2 (ENSBBBG00000011679) #12	NKX2-5 (ENSBBBG00000011682) #13	BNIP1 (ENSBBBG00000011701) #14	CREBRF (ENSBBBG00000011711) #15	ENSBBBG00000011722 #16	RPL26L1 (ENSBBBG00000011726) #17	ERGIC1 (ENSBBBG00000002176) #18	DUSP1 (ENSBBBG00000011749) #19	NEURL1B (ENSBBBG00000011766) #20	SH3PXD2B (ENSBBBG00000011784) #21	UBTD2 (ENSBBBG00000011796) #22	EFCAB9 (ENSBBBG00000002192) #23	STK10 (ENSBBBG00000011816) #25	FBXW11 (ENSBBBG00000011859)	ENSBBBG00000007881	ENSBBBG00000011871	FGF18 (ENSBBBG00000011877)	ENSBBBG00000011930	TLX3 (ENSBBBG00000011939)
Bos	ANCESTRAL SPECIES	26	ENSGT00390000000483.a.a	ENSGT00940000168505	ENSGT00940000154998.a.a #10	ENSGT00420000029792.d	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT01000000218258	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Bos_b	ANCESTRAL SPECIES	29	ENSGT00390000000483.a.a	ENSGT00940000168505	ENSGT00940000154998.a.a #10	ENSGT00420000029792.d	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.d ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT01000000218258	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Cow	MODERN SPECIES	12	ENSBTAG00000048786	NSG2 (ENSBTAG00000000564)	C20H5orf47 (ENSBTAG00000054459)	CPEB4 (ENSBTAG00000009995) #10	BOD1 (ENSBTAG00000034598) #11	STC2 (ENSBTAG00000001823) #12	NKX2-5 (ENSBTAG00000020568) #13	BNIP1 (ENSBTAG00000002021) #14	CREBRF (ENSBTAG00000002020) #15	ATP6V0E1 (ENSBTAG00000015100) #16	RPL26L1 (ENSBTAG00000015099) ##17	ERGIC1 (ENSBTAG00000015955) #18	DUSP1 (ENSBTAG00000013863) #19	NEURL1B (ENSBTAG00000001429) #20	SH3PXD2B (ENSBTAG00000009019) #21	UBTD2 (ENSBTAG00000034659) #22	EFCAB9 (ENSBTAG00000008876) #23	STK10 (ENSBTAG00000017457) #25	FBXW11 (ENSBTAG00000015376)	ENSBTAG00000053610	ENSBTAG00000054615	FGF18 (ENSBTAG00000000128)	NPM1 (ENSBTAG00000015316)	TLX3 (ENSBTAG00000010003)	RANBP17 (ENSBTAG00000024801)	GABRP (ENSBTAG00000002779)	KCNIP1 (ENSBTAG00000002865)	KCNMB1 (ENSBTAG00000002985)	LCP2 (ENSBTAG00000009381)	FOXI1 (ENSBTAG00000014620)	INSYN2B (ENSBTAG00000002134)
Hybrid Bos Indicus	MODERN SPECIES	12	NSG2 (ENSBIXG00005018735)	ENSBIXG00005018775	CPEB4 (ENSBIXG00005018897) #10	ENSBIXG00005018925 #11	STC2 (ENSBIXG00005018970) #12	NKX2-5 (ENSBIXG00005018998) #13	BNIP1 (ENSBIXG00005019018) #14	CREBRF (ENSBIXG00005002650) #15	ENSBIXG00005019047	ENSBIXG00005005519 #16	ENSBIXG00005019189 #18	DUSP1 (ENSBIXG00005007821) #19	NEURL1B (ENSBIXG00005019283) #20	SH3PXD2B (ENSBIXG00005019342) #21	ENSBIXG00005003145	UBTD2 (ENSBIXG00005007823) #22	EFCAB9 (ENSBIXG00005019383) #23	STK10 (ENSBIXG00005019395) #25	FBXW11 (ENSBIXG00005006031)	ENSBIXG00005019479	ENSBIXG00005003177	FGF18 (ENSBIXG00005019550)	ENSBIXG00005019594	TLX3 (ENSBIXG00005019612)	RANBP17 (ENSBIXG00005019712)	GABRP (ENSBIXG00005019798)	KCNMB1 (ENSBIXG00005019845)	KCNIP1 (ENSBIXG00005020080)	LCP2 (ENSBIXG00005003334)	C5orf58 (ENSBIXG00005003342)	FOXI1 (ENSBIXG00005005867)
Bos_a	ANCESTRAL SPECIES	74	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00420000029792.d	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT01000000218258	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00940000154903.b
Wild yak	MODERN SPECIES	2361															SH3PXD2B (ENSBMUG00000017549) #21	UBTD2 (ENSBMUG00000017568) #22	EFCAB9 (ENSBMUG00000017597) #23	STK10 (ENSBMUG00000017627) #25	FBXW11 (ENSBMUG00000017679)	ENSBMUG00000017728
Caprinae	ANCESTRAL SPECIES	24	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000157760.e	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00390000016262.f	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.m	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Goat	MODERN SPECIES	12	C5orf47 (ENSCHIG00000015963)	CPEB4 (ENSCHIG00000011030) #10	ENSCHIG00000014604	ENSCHIG00000021511 #11	STC2 (ENSCHIG00000005361) #12	NKX2-5 (ENSCHIG00000017420) #13	BNIP1 (ENSCHIG00000007910) #14	CREBRF (ENSCHIG00000011720) #15	ENSCHIG00000023731 #16	RPL26L1 (ENSCHIG00000015371) #17	ERGIC1 (ENSCHIG00000000491) #18	DUSP1 (ENSCHIG00000021879) #19	NEURL1B (ENSCHIG00000011973) #20	SH3PXD2B (ENSCHIG00000017285) #21	ENSCHIG00000019482	UBTD2 (ENSCHIG00000008177) #22	STK10 (ENSCHIG00000022275) #25	FBXW11 (ENSCHIG00000015807)	ENSCHIG00000020677	FGF18 (ENSCHIG00000011455)	ENSCHIG00000013986	TLX3 (ENSCHIG00000009023)	ENSCHIG00000007336	GABRP (ENSCHIG00000013304)	KCNIP1 (ENSCHIG00000022505)	ENSCHIG00000019721	KCNMB1 (ENSCHIG00000016254)	LCP2 (ENSCHIG00000020683)	FOXI1 (ENSCHIG00000015541)	INSYN2B (ENSCHIG00000008171)	ENSCHIG00000022506
Rambouillet Sheep	MODERN SPECIES	7	NSG2 (ENSOARG00020020679)	C5orf47 (ENSOARG00020020601)	CPEB4 (ENSOARG00020019809) #10	ENSOARG00020019684 #11	STC2 (ENSOARG00020019635) #12	NKX2-5 (ENSOARG00020019608) #13	BNIP1 (ENSOARG00020019520) #14	CREBRF (ENSOARG00020019431) #15	ATP6V0E1 (ENSOARG00020019362) #16	RPL26L1 (ENSOARG00020019301) #17	ERGIC1 (ENSOARG00020019165) #18	DUSP1 (ENSOARG00020019107) #19	NEURL1B (ENSOARG00020018934) #20	SH3PXD2B (ENSOARG00020018558) #21	ENSOARG00020018509	UBTD2 (ENSOARG00020018478) #22	EFCAB9 (ENSOARG00020018435) #23	STK10 (ENSOARG00020017936) #25	ENSOARG00020017649	FGF18 (ENSOARG00020017567)	ENSOARG00020017428	TLX3 (ENSOARG00020017378)	RANBP17 (ENSOARG00020016041)	GABRP (ENSOARG00020015850)	KCNMB1 (ENSOARG00020015798)	KCNIP1 (ENSOARG00020015228)	LCP2 (ENSOARG00020014665)	C5orf58 (ENSOARG00020014592)	FOXI1 (ENSOARG00020014555)	INSYN2B (ENSOARG00020014497)	DOCK2 (ENSOARG00020014360)
Siberian musk deer	MODERN SPECIES	182	ENSMMSG00000015984	NSG2 (ENSMMSG00000016007)	CPEB4 (ENSMMSG00000016141) #10	ENSMMSG00000016319	ENSMMSG00000016344 #11	STC2 (ENSMMSG00000016387) #12	NKX2-5 (ENSMMSG00000016422) #13	BNIP1 (ENSMMSG00000016447) #14	CREBRF (ENSMMSG00000016494) #15	ENSMMSG00000016537 #16	RPL26L1 (ENSMMSG00000016583) #17	ERGIC1 (ENSMMSG00000016601) #18	DUSP1 (ENSMMSG00000016631) #19	NEURL1B (ENSMMSG00000016666) #20	SH3PXD2B (ENSMMSG00000016746) #21	UBTD2 (ENSMMSG00000016799) #22	EFCAB9 (ENSMMSG00000016840) #23	STK10 (ENSMMSG00000016886) #25	FBXW11 (ENSMMSG00000016966)	FGF18 (ENSMMSG00000017102)	ENSMMSG00000017147	TLX3 (ENSMMSG00000017339)	RANBP17 (ENSMMSG00000017367)	GABRP (ENSMMSG00000017535)	KCNIP1 (ENSMMSG00000017604)	KCNMB1 (ENSMMSG00000018061)	LCP2 (ENSMMSG00000018116)	C5orf58 (ENSMMSG00000018219)	FOXI1 (ENSMMSG00000018248)	DOCK2 (ENSMMSG00000018299)	INSYN2B (ENSMMSG00000018530)
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.b.a.a.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.k.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Blue whale	MODERN SPECIES	14	STC2 (ENSBMSG00010011331) #12	ENSBMSG00010011323	NKX2-5 (ENSBMSG00010011319) #13	ENSBMSG00010011310	ENSBMSG00010011299	BNIP1 (ENSBMSG00010011290) #14	ENSBMSG00010011277	CREBRF (ENSBMSG00010011255) #15	ENSBMSG00010011236 #16	RPL26L1 (ENSBMSG00010011223) #17	ERGIC1 (ENSBMSG00010011201) #18	DUSP1 (ENSBMSG00010011183) #19	NEURL1B (ENSBMSG00010011096) #20	SH3PXD2B (ENSBMSG00010011059) #21	ENSBMSG00010011045	UBTD2 (ENSBMSG00010011030) #22	EFCAB9 (ENSBMSG00010011022) #23	ENSBMSG00010011019	STK10 (ENSBMSG00010011007) #25	ENSBMSG00010010999	FBXW11 (ENSBMSG00010010896)	SMIM23 (ENSBMSG00010010861)	FGF18 (ENSBMSG00010010843)	ENSBMSG00010010827	TLX3 (ENSBMSG00010010805)	RANBP17 (ENSBMSG00010010778)	GABRP (ENSBMSG00010010718)	ENSBMSG00010010657	KCNMB1 (ENSBMSG00010010631)	RNF145 (ENSBMSG00010010449)	ENSBMSG00010010400
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.b.a.a.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.k.a.a.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Sperm whale	MODERN SPECIES	11	MSX2 (ENSPCTG00005002856)	NSG2 (ENSPCTG00005002847)	C5orf47 (ENSPCTG00005002836)	CPEB4 (ENSPCTG00005002819) #10	BOD1 (ENSPCTG00005002798) #11	STC2 (ENSPCTG00005002775) #12	NKX2-5 (ENSPCTG00005002758) #13	BNIP1 (ENSPCTG00005002731) #14	CREBRF (ENSPCTG00005002713) #15	ATP6V0E1 (ENSPCTG00005002688) #16	RPL26L1 (ENSPCTG00005002672) #17	ERGIC1 (ENSPCTG00005002638) #18	DUSP1 (ENSPCTG00005002618) #19	NEURL1B (ENSPCTG00005002578) #20	SH3PXD2B (ENSPCTG00005002536) #21	UBTD2 (ENSPCTG00005002517) #22	EFCAB9 (ENSPCTG00005002503) #23	STK10 (ENSPCTG00005002452) #25	FBXW11 (ENSPCTG00005002420)	SMIM23 (ENSPCTG00005002400)	FGF18 (ENSPCTG00005002388)	NPM1 (ENSPCTG00005002370)	TLX3 (ENSPCTG00005002353)	RANBP17 (ENSPCTG00005002281)	GABRP (ENSPCTG00005002206)	KCNMB1 (ENSPCTG00005002175)	KCNIP1 (ENSPCTG00005002065)	LCP2 (ENSPCTG00005001929)	C2H5orf58 (ENSPCTG00005001891)	FOXI1 (ENSPCTG00005001878)	INSYN2B (ENSPCTG00005001869)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.b.a.a.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.k.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Dolphin	MODERN SPECIES	1756															SH3PXD2B (ENSTTRG00000012935) #21	UBTD2 (ENSTTRG00000012934) #22	EFCAB9 (ENSTTRG00000012933) #23	STK10 (ENSTTRG00000012927) #25
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.b.a.a.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.k.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Vaquita	MODERN SPECIES	14	NSG2 (ENSPSNG00000006661)	ENSPSNG00000006717	C5orf47 (ENSPSNG00000006745)	CPEB4 (ENSPSNG00000006810) #10	ENSPSNG00000006924 #11	STC2 (ENSPSNG00000006970) #12	NKX2-5 (ENSPSNG00000007002) #13	BNIP1 (ENSPSNG00000007042) #14	CREBRF (ENSPSNG00000007099) #15	ENSPSNG00000007148 #16	RPL26L1 (ENSPSNG00000007180) #17	ERGIC1 (ENSPSNG00000007216) #18	DUSP1 (ENSPSNG00000007271) #19	NEURL1B (ENSPSNG00000007317) #20	SH3PXD2B (ENSPSNG00000007402) #21	UBTD2 (ENSPSNG00000007475) #22	EFCAB9 (ENSPSNG00000007521) #23	STK10 (ENSPSNG00000007570) #25	ENSPSNG00000007596	FBXW11 (ENSPSNG00000007701)	SMIM23 (ENSPSNG00000007767)	FGF18 (ENSPSNG00000007820)	ENSPSNG00000007851	TLX3 (ENSPSNG00000007915)	RANBP17 (ENSPSNG00000007956)	GABRP (ENSPSNG00000008024)	KCNIP1 (ENSPSNG00000008231)	KCNMB1 (ENSPSNG00000008456)	LCP2 (ENSPSNG00000008524)	C5orf58 (ENSPSNG00000008844)	FOXI1 (ENSPSNG00000008872)
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.db.b.a.a.a #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b.k.a.a.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Narwhal	MODERN SPECIES	298	C5orf47 (ENSMMNG00015008001)	CPEB4 (ENSMMNG00015007861) #10	ENSMMNG00015007782 #11	STC2 (ENSMMNG00015007763) #12	ENSMMNG00015007753	NKX2-5 (ENSMMNG00015007742) #13	BNIP1 (ENSMMNG00015007725) #14	CREBRF (ENSMMNG00015007693) #15	ENSMMNG00015007663 #16	RPL26L1 (ENSMMNG00015007637) #17	ENSMMNG00015007623	ERGIC1 (ENSMMNG00015007594) #18	DUSP1 (ENSMMNG00015007561) #19	NEURL1B (ENSMMNG00015007510) #20	SH3PXD2B (ENSMMNG00015007447) #21	UBTD2 (ENSMMNG00015007429) #22	EFCAB9 (ENSMMNG00015007406) #23	STK10 (ENSMMNG00015007367) #25	ENSMMNG00015007348	FBXW11 (ENSMMNG00015007223)	SMIM23 (ENSMMNG00015007147)	FGF18 (ENSMMNG00015007127)	ENSMMNG00015007049	TLX3 (ENSMMNG00015007005)	RANBP17 (ENSMMNG00015006966)	GABRP (ENSMMNG00015006917)	KCNMB1 (ENSMMNG00015006894)	KCNIP1 (ENSMMNG00015006810)	LCP2 (ENSMMNG00015006650)	C5orf58 (ENSMMNG00015006620)	FOXI1 (ENSMMNG00015006610)
Beluga whale	MODERN SPECIES	33	NSG2 (ENSDLEG00000011113)	C5orf47 (ENSDLEG00000011128)	CPEB4 (ENSDLEG00000011156) #10	ENSDLEG00000011214 #11	STC2 (ENSDLEG00000011225) #12	NKX2-5 (ENSDLEG00000011239) #13	BNIP1 (ENSDLEG00000011252) #14	CREBRF (ENSDLEG00000011269) #15	ATP6V0E1 (ENSDLEG00000011297) #16	RPL26L1 (ENSDLEG00000011305) #17	ERGIC1 (ENSDLEG00000011315) #18	ENSDLEG00000011343	DUSP1 (ENSDLEG00000011353) #19	NEURL1B (ENSDLEG00000011362) #20	SH3PXD2B (ENSDLEG00000011382) #21	UBTD2 (ENSDLEG00000011425) #22	EFCAB9 (ENSDLEG00000011435) #23	STK10 (ENSDLEG00000011442) #25	FBXW11 (ENSDLEG00000011487)	FGF18 (ENSDLEG00000011572)	ENSDLEG00000011597	TLX3 (ENSDLEG00000011715)	RANBP17 (ENSDLEG00000011734)	GABRP (ENSDLEG00000011916)	KCNIP1 (ENSDLEG00000011937)	KCNMB1 (ENSDLEG00000011951)	LCP2 (ENSDLEG00000011962)	FOXI1 (ENSDLEG00000012032)	DOCK2 (ENSDLEG00000012052)	FAM196B (ENSDLEG00000012141)	SPDL1 (ENSDLEG00000012152)
Camelidae	ANCESTRAL SPECIES	57	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866.eb #16	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00940000159553	ENSGT00940000153052.c.b.a.b	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Alpaca	MODERN SPECIES	6025																ENSVPAG00000002308 #22
Arabian camel	MODERN SPECIES	14	NSG2 (ENSCDRG00005004158)	CPEB4 (ENSCDRG00005004317) #10	ENSCDRG00005004889 #11	STC2 (ENSCDRG00005004904) #12	NKX2-5 (ENSCDRG00005004925) #13	BNIP1 (ENSCDRG00005004968) #14	CREBRF (ENSCDRG00005005000) #15	ENSCDRG00005005036	ENSCDRG00005005054 #16	RPL26L1 (ENSCDRG00005005086) #17	ERGIC1 (ENSCDRG00005005118) #18	ENSCDRG00005005259 #19	DUSP1 (ENSCDRG00005005269) #19	NEURL1B (ENSCDRG00005005289) #20	SH3PXD2B (ENSCDRG00005005308) #21	UBTD2 (ENSCDRG00005005351) #22	EFCAB9 (ENSCDRG00005005368) #23	STK10 (ENSCDRG00005005406) #25	FBXW11 (ENSCDRG00005005462)	FGF18 (ENSCDRG00005005676)	ENSCDRG00005005702	TLX3 (ENSCDRG00005005878)	RANBP17 (ENSCDRG00005005894)	GABRP (ENSCDRG00005005990)	KCNIP1 (ENSCDRG00005006051)	KCNMB1 (ENSCDRG00005006283)	LCP2 (ENSCDRG00005006345)	C5orf58 (ENSCDRG00005006496)	FOXI1 (ENSCDRG00005006523)	DOCK2 (ENSCDRG00005006556)	INSYN2B (ENSCDRG00005006819)
Atlantogenata	ANCESTRAL SPECIES		ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.d	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000161316	ENSGT00940000154903	ENSGT00530000063787.A
Xenarthra	ANCESTRAL SPECIES	369									ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300
Sloth	DUPLICATION
Sloth	MODERN SPECIES	10925																ENSCHOG00000010234 #22
Sloth	MODERN SPECIES	9909																ENSCHOG00000013277 #22
Armadillo	MODERN SPECIES	2167							ENSDNOG00000047902 #14	CREBRF (ENSDNOG00000038335) #15	ENSDNOG00000002470 #17	ERGIC1 (ENSDNOG00000025894) #18	DUSP1 (ENSDNOG00000049169) #19	NEURL1B (ENSDNOG00000030867) #20	ENSDNOG00000032370	ENSDNOG00000049433	SH3PXD2B (ENSDNOG00000046535) #21	UBTD2 (ENSDNOG00000003811) #22	EFCAB9 (ENSDNOG00000023791) #23	STK10 (ENSDNOG00000032482) #25	FBXW11 (ENSDNOG00000008383)	ENSDNOG00000016030
Afrotheria	ANCESTRAL SPECIES	7	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.d	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000161316	ENSGT00510000047951	ENSGT00940000159322
Afrotheria_a	ANCESTRAL SPECIES	7	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00390000014165.c.b #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.d	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000161316	ENSGT00940000154903	ENSGT00530000063787.A
Elephant	MODERN SPECIES	2	DRD1 (ENSLAFG00000010433)	MSX2 (ENSLAFG00000001916)	NSG2 (ENSLAFG00000028103)	CPEB4 (ENSLAFG00000016030) #10	ENSLAFG00000003066 #11	STC2 (ENSLAFG00000006193) #12	NKX2-5 (ENSLAFG00000029311) #13	ENSLAFG00000027511 #14	CREBRF (ENSLAFG00000013690) #15	RPL26L1 (ENSLAFG00000006797) #17	ERGIC1 (ENSLAFG00000006791) #18	DUSP1 (ENSLAFG00000007743) #19	NEURL1B (ENSLAFG00000020677) #20	ENSLAFG00000029644	SH3PXD2B (ENSLAFG00000016210) #21	UBTD2 (ENSLAFG00000011441) #22	EFCAB9 (ENSLAFG00000020630) #23	ENSLAFG00000023319 #25	FBXW11 (ENSLAFG00000006465)	SMIM23 (ENSLAFG00000007608)	FGF18 (ENSLAFG00000021964)	ENSLAFG00000007677	TLX3 (ENSLAFG00000022612)	RANBP17 (ENSLAFG00000006675)	GABRP (ENSLAFG00000016812)	KCNIP1 (ENSLAFG00000016800)	KCNMB1 (ENSLAFG00000000860)	LCP2 (ENSLAFG00000012264)	FOXI1 (ENSLAFG00000026591)	INSYN2B (ENSLAFG00000004326)	DOCK2 (ENSLAFG00000006687)
Hyrax	MODERN SPECIES	7287																UBTD2 (ENSPCAG00000012855) #22	EFCAB9 (ENSPCAG00000012820) #23
Tenrec	MODERN SPECIES	6142																UBTD2 (ENSETEG00000019454) #22
Marsupialia	ANCESTRAL SPECIES	9	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.a.a ##17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Opossum	MODERN SPECIES		MSX2 (ENSMODG00000005933)	ENSMODG00000023086	ENSMODG00000006007	CPEB4 (ENSMODG00000006036) #10	ENSMODG00000006047 #11	STC2 (ENSMODG00000006146) #12	NKX2-5 (ENSMODG00000006154) #13	BNIP1 (ENSMODG00000044680) #14	CREBRF (ENSMODG00000006184) #15	ATP6V0E1 (ENSMODG00000044657) #16	ENSMODG00000006201 ##17	ERGIC1 (ENSMODG00000006214) #18	DUSP1 (ENSMODG00000050204) #19	NEURL1B (ENSMODG00000006234) #20	SH3PXD2B (ENSMODG00000006308) #21	UBTD2 (ENSMODG00000006341) #22	EFCAB9 (ENSMODG00000006348) #23	ENSMODG00000006392	STK10 (ENSMODG00000006383) #25	ENSMODG00000006398	FBXW11 (ENSMODG00000006464)	ENSMODG00000040419	FGF18 (ENSMODG00000042284)	ENSMODG00000006503	TLX3 (ENSMODG00000006508)	RANBP17 (ENSMODG00000006743)	ENSMODG00000006751	GABRP (ENSMODG00000006766)	KCNIP1 (ENSMODG00000006821)	KCNMB1 (ENSMODG00000049950)	ENSMODG00000037702
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.a.a ##17	ENSGT00390000002856	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b	ENSGT00940000160813	ENSGT00940000158048	ENSGT00950000183039.B.b.b	ENSGT00940000156835	ENSGT00940000172454	ENSGT00940000161316	ENSGT00940000154903
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.a.a ##17	ENSGT00390000002856	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b
Wallaby	MODERN SPECIES	7617																UBTD2 (ENSMEUG00000014039) #22
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00940000154576.d	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165.c.a.a ##17	ENSGT00390000002856	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000168748.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000155898	ENSGT00390000017300	ENSGT00940000159553	ENSGT00940000153052.b.a	ENSGT00940000160629	ENSGT00940000153139.B.b
koala	MODERN SPECIES	44															SH3PXD2B (ENSPCIG00000013582) #21	UBTD2 (ENSPCIG00000013586) #22	EFCAB9 (ENSPCIG00000013587) #23	STK10 (ENSPCIG00000013590) #25	FBXW11 (ENSPCIG00000013595)	ENSPCIG00000013606	FGF18 (ENSPCIG00000035812)	ENSPCIG00000013615	TLX3 (ENSPCIG00000013618)	RANBP17 (ENSPCIG00000013624)	ENSPCIG00000035542	GABRP (ENSPCIG00000009201)	KCNIP1 (ENSPCIG00000029587)	KCNMB1 (ENSPCIG00000029591)	LCP2 (ENSPCIG00000029596)	ENSPCIG00000035878	FOXI1 (ENSPCIG00000029606)
Common wonbat	MODERN SPECIES	1087	CPEB4 (ENSVURG00010000453) #10	ENSVURG00010000764 #11	ENSVURG00010000781	STC2 (ENSVURG00010000867) #12	ENSVURG00010000877 #13	BNIP1 (ENSVURG00010000889) #14	ENSVURG00010000900	CREBRF (ENSVURG00010000924) #15	ATP6V0E1 (ENSVURG00010000934) #16	ENSVURG00010000947 ##17	ERGIC1 (ENSVURG00010000991) #18	DUSP1 (ENSVURG00010001003) #19	NEURL1B (ENSVURG00010001019) #20	ENSVURG00010001025	SH3PXD2B (ENSVURG00010001083) #21	UBTD2 (ENSVURG00010001111) #22	EFCAB9 (ENSVURG00010001123) #23	STK10 (ENSVURG00010001138) #25	FBXW11 (ENSVURG00010001229)	FGF18 (ENSVURG00010001447)	ENSVURG00010001462	TLX3 (ENSVURG00010001476)	RANBP17 (ENSVURG00010001640)	ENSVURG00010001683	GABRP (ENSVURG00010001693)	KCNIP1 (ENSVURG00010001747)	KCNMB1 (ENSVURG00010001909)	LCP2 (ENSVURG00010001951)	ENSVURG00010001973	FOXI1 (ENSVURG00010002020)	DOCK2 (ENSVURG00010002112)
Tasmanian devil	MODERN SPECIES	1	NSG2 (ENSSHAG00000026505)	CPEB4 (ENSSHAG00000025977) #10	ENSSHAG00000027063 #11	STC2 (ENSSHAG00000025128) #12	NKX2-5 (ENSSHAG00000008877) #13	BNIP1 (ENSSHAG00000028003) #14	CREBRF (ENSSHAG00000007714) #15	ATP6V0E1 (ENSSHAG00000029538) #16	ENSSHAG00000028181 ##17	ERGIC1 (ENSSHAG00000004451) #18	DUSP1 (ENSSHAG00000002204) #19	ENSSHAG00000025417	NEURL1B (ENSSHAG00000002600) #20	SH3PXD2B (ENSSHAG00000027120) #21	EFCAB9 (ENSSHAG00000022167) #23	UBTD2 (ENSSHAG00000024875) #22	STK10 (ENSSHAG00000012835) #25	FBXW11 (ENSSHAG00000012435)	ENSSHAG00000011730	FGF18 (ENSSHAG00000031040)	NPM1 (ENSSHAG00000009312)	TLX3 (ENSSHAG00000029838)	RANBP17 (ENSSHAG00000000333)	GABRP (ENSSHAG00000001188)	KCNIP1 (ENSSHAG00000031219)	KCNMB1 (ENSSHAG00000018807)	LCP2 (ENSSHAG00000018705)	FOXI1 (ENSSHAG00000018578)	INSYN2B (ENSSHAG00000018341)	DOCK2 (ENSSHAG00000018073)	SPDL1 (ENSSHAG00000018028)
Platypus	MODERN SPECIES	84	RPS14 (ENSOANG00000043895)	ENSOANG00000002309	ENSOANG00000002305	ARSI (ENSOANG00000045896)	CAMK2A (ENSOANG00000002299)	SLC6A7 (ENSOANG00000002296)	CDX1 (ENSOANG00000039377)	PDGFRB (ENSOANG00000002294)	CSF1R (ENSOANG00000002293)	HMGXB3 (ENSOANG00000002292)	ENSOANG00000014966	ENSOANG00000004351	FLT4 (ENSOANG00000001739)	RNF130 (ENSOANG00000020588)	TBC1D9B (ENSOANG00000004120)	UBTD2 (ENSOANG00000006605) #22	ENSOANG00000039699 #23	STK10 (ENSOANG00000010949) #25	SH3PXD2B (ENSOANG00000040007) #21	NEURL1B (ENSOANG00000014559) #20	DUSP1 (ENSOANG00000040425) #19	ERGIC1 (ENSOANG00000040410) #18	ENSOANG00000022022 ##17	ENSOANG00000021011 ##17	CREBRF (ENSOANG00000003984) #15	BNIP1 (ENSOANG00000046862) #14	NKX2-5 (ENSOANG00000037400) #13	STC2 (ENSOANG00000041282) #12	ENSOANG00000045637 #11	CPEB4 (ENSOANG00000047376) #10	NSG2 (ENSOANG00000014066)
Sauria	ANCESTRAL SPECIES	17	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Lepidosauria	ANCESTRAL SPECIES	15	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Episquamata	ANCESTRAL SPECIES	4	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Elapidae	ANCESTRAL SPECIES	2	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818.p #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a.b #10	ENSGT00390000000483.a.a
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818.p #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a.b #10	ENSGT00390000000483.a.a
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818.p #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a.b #10	ENSGT00390000000483.a.a
Eastern brown snake	MODERN SPECIES	6	FBXO38 (ENSPTXG00000009390)	HTR4 (ENSPTXG00000009391)	ENSPTXG00000009392	SLC26A2 (ENSPTXG00000000054)	PPARGC1B (ENSPTXG00000000068)	ARHGEF37 (ENSPTXG00000000222)	ENSPTXG00000000279	CSNK1A1 (ENSPTXG00000000431)	IL17B (ENSPTXG00000000473)	PCYOX1L (ENSPTXG00000000528)	GRPEL2 (ENSPTXG00000000539)	AFAP1L1 (ENSPTXG00000000554)	ABLIM3 (ENSPTXG00000000575)	SH3TC2 (ENSPTXG00000000607)	ADRB2 (ENSPTXG00000000624)	UBTD2 (ENSPTXG00000000628) #22	EFCAB9 (ENSPTXG00000000630) #23	STK10 (ENSPTXG00000000694) #25	SH3PXD2B (ENSPTXG00000001015) #21	NEURL1B (ENSPTXG00000001020) #20	DUSP1 (ENSPTXG00000001023) #19	ERGIC1 (ENSPTXG00000001026) #18	RPL26 (ENSPTXG00000001032) ##17	ATP6V0E1 (ENSPTXG00000001035) #16	CREBRF (ENSPTXG00000001039) #15	BNIP1 (ENSPTXG00000001046) #14	NKX2-5 (ENSPTXG00000001049) #13	STC2 (ENSPTXG00000001061) #12	ENSPTXG00000001067 #11	CPEB4 (ENSPTXG00000001069) #10	NSG2 (ENSPTXG00000001071)
Mainland tiger snake	MODERN SPECIES	4	HTR4 (ENSNSUG00000010865)	ENSNSUG00000010831	SLC26A2 (ENSNSUG00000010802)	PPARGC1B (ENSNSUG00000010762)	ARHGEF37 (ENSNSUG00000010758)	ENSNSUG00000010718	CSNK1A1 (ENSNSUG00000010717)	ENSNSUG00000010716	IL17B (ENSNSUG00000010709)	PCYOX1L (ENSNSUG00000010707)	GRPEL2 (ENSNSUG00000010706)	AFAP1L1 (ENSNSUG00000010596)	ABLIM3 (ENSNSUG00000010584)	SH3TC2 (ENSNSUG00000010581)	ADRB2 (ENSNSUG00000010579)	UBTD2 (ENSNSUG00000010577) #22	EFCAB9 (ENSNSUG00000010573) #23	STK10 (ENSNSUG00000010569) #25	SH3PXD2B (ENSNSUG00000010565) #21	NEURL1B (ENSNSUG00000010551) #20	DUSP1 (ENSNSUG00000010548) #19	ERGIC1 (ENSNSUG00000010544) #18	RPL26 (ENSNSUG00000010543) ##17	ATP6V0E1 (ENSNSUG00000010542) #16	CREBRF (ENSNSUG00000010517) #15	BNIP1 (ENSNSUG00000010509) #14	NKX2-5 (ENSNSUG00000010507) #13	STC2 (ENSNSUG00000010506) #12	ENSNSUG00000010505	ENSNSUG00000010502 #11	CPEB4 (ENSNSUG00000010499) #10
Blue-lipped sea krait	MODERN SPECIES	169																UBTD2 (ENSLLTG00000016496) #22
Indian cobra	MODERN SPECIES	1	ECHS1 (ENSNNAG00000001819)	FBXO38 (ENSNNAG00000001781)	HTR4 (ENSNNAG00000001749)	ENSNNAG00000001656	SLC26A2 (ENSNNAG00000001567)	PPARGC1B (ENSNNAG00000001536)	ARHGEF37 (ENSNNAG00000001335)	CSNK1A1 (ENSNNAG00000001230)	IL17B (ENSNNAG00000001196)	PCYOX1L (ENSNNAG00000001092)	GRPEL2 (ENSNNAG00000001028)	AFAP1L1 (ENSNNAG00000000702)	ABLIM3 (ENSNNAG00000000585)	SH3TC2 (ENSNNAG00000000550)	ADRB2 (ENSNNAG00000000525)	UBTD2 (ENSNNAG00000000511) #22	EFCAB9 (ENSNNAG00000000494) #23	STK10 (ENSNNAG00000000463) #25	SH3PXD2B (ENSNNAG00000000415) #21	NEURL1B (ENSNNAG00000000391) #20	DUSP1 (ENSNNAG00000000362) #19	ERGIC1 (ENSNNAG00000000336) #18	RPL26 (ENSNNAG00000000313) ##17	ATP6V0E1 (ENSNNAG00000000299) #16	CREBRF (ENSNNAG00000014762) #15	BNIP1 (ENSNNAG00000014746) #14	NKX2-5 (ENSNNAG00000014737) #13	STC2 (ENSNNAG00000014718) #12	ENSNNAG00000014713 #11	CPEB4 (ENSNNAG00000014689) #10	NSG2 (ENSNNAG00000014660)
Lizard	MODERN SPECIES	1	PPARGC1B (ENSACAG00000015737)	ENSACAG00000028909	ARHGEF37 (ENSACAG00000015707)	ENSACAG00000028117	ENSACAG00000036989	CSNK1A1 (ENSACAG00000015659)	IL17B (ENSACAG00000015644)	PCYOX1L (ENSACAG00000015622)	GRPEL2 (ENSACAG00000015596)	AFAP1L1 (ENSACAG00000015542)	ABLIM3 (ENSACAG00000015469)	ENSACAG00000039080	SH3TC2 (ENSACAG00000015429)	ADRB2 (ENSACAG00000015418)	ENSACAG00000038795	UBTD2 (ENSACAG00000015415) #22	ENSACAG00000015404 #23	STK10 (ENSACAG00000015294) #25	ENSACAG00000036124	SH3PXD2B (ENSACAG00000042684) #21	ENSACAG00000015261 #20	ENSACAG00000039578	DUSP1 (ENSACAG00000015246) #19	ERGIC1 (ENSACAG00000015210) #18	ENSACAG00000015187 ##17	ATP6V0E1 (ENSACAG00000015183) #16	CREBRF (ENSACAG00000015164) #15	BNIP1 (ENSACAG00000015149) #14	ENSACAG00000035116	ENSACAG00000038558	NKX2-5 (ENSACAG00000015142) #13
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000157609	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Argentine black and white tegu	MODERN SPECIES	1	HTR4 (ENSSMRG00000001233)	ENSSMRG00000001136	SLC26A2 (ENSSMRG00000001051)	PPARGC1B (ENSSMRG00000001032)	ARHGEF37 (ENSSMRG00000000923)	ENSSMRG00000000841	CSNK1A1 (ENSSMRG00000000796)	IL17B (ENSSMRG00000000774)	PCYOX1L (ENSSMRG00000000762)	GRPEL2 (ENSSMRG00000000756)	AFAP1L1 (ENSSMRG00000000709)	ABLIM3 (ENSSMRG00000000668)	SH3TC2 (ENSSMRG00000000562)	ADRB2 (ENSSMRG00000000556)	ENSSMRG00000000551	UBTD2 (ENSSMRG00000000513) #22	EFCAB9 (ENSSMRG00000000510) #23	STK10 (ENSSMRG00000000484) #25	SH3PXD2B (ENSSMRG00000000416) #21	NEURL1B (ENSSMRG00000000401) #20	DUSP1 (ENSSMRG00000000325) #19	ERGIC1 (ENSSMRG00000000312) #18	RPL26 (ENSSMRG00000000294) ##17	ATP6V0E1 (ENSSMRG00000000286) #16	CREBRF (ENSSMRG00000000260) #15	BNIP1 (ENSSMRG00000000231) #14	NKX2-5 (ENSSMRG00000000222) #13	STC2 (ENSSMRG00000000202) #12	ENSSMRG00000000165 #11	CPEB4 (ENSSMRG00000000069) #10	NSG2 (ENSSMRG00000000041)
tuatara	MODERN SPECIES	1232									IL17B (ENSSPUG00000003200)	PCYOX1L (ENSSPUG00000003214)	GRPEL2 (ENSSPUG00000003260)	AFAP1L1 (ENSSPUG00000003405)	ABLIM3 (ENSSPUG00000003470)	SH3TC2 (ENSSPUG00000003515)	ADRB2 (ENSSPUG00000003608)	UBTD2 (ENSSPUG00000003618) #22	EFCAB9 (ENSSPUG00000003620) #23	STK10 (ENSSPUG00000003630) #25	SH3PXD2B (ENSSPUG00000003640) #21
Archelosauria	ANCESTRAL SPECIES	15	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Cryptodira	ANCESTRAL SPECIES	15	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Emydidae	ANCESTRAL SPECIES	11	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Three-toed box turtle	MODERN SPECIES	177	FBXO38 (ENSTMTG00000015153)	HTR4 (ENSTMTG00000015116)	SLC26A2 (ENSTMTG00000015109)	ENSTMTG00000015086	PPARGC1B (ENSTMTG00000015044)	ARHGEF37 (ENSTMTG00000015020)	ENSTMTG00000014993	CSNK1A1 (ENSTMTG00000014973)	IL17B (ENSTMTG00000014942)	PCYOX1L (ENSTMTG00000014925)	GRPEL2 (ENSTMTG00000014920)	AFAP1L1 (ENSTMTG00000014767)	ABLIM3 (ENSTMTG00000013687)	SH3TC2 (ENSTMTG00000013579)	ADRB2 (ENSTMTG00000013564)	UBTD2 (ENSTMTG00000013558) #22	STK10 (ENSTMTG00000013536) #25	SH3PXD2B (ENSTMTG00000013489) #21	NEURL1B (ENSTMTG00000013469) #20	DUSP1 (ENSTMTG00000013458) #19
painted turtle	MODERN SPECIES	2385	HTR4 (ENSCPBG00000007919)	ENSCPBG00000007906	SLC26A2 (ENSCPBG00000007902)	ENSCPBG00000007898	PPARGC1B (ENSCPBG00000007891)	ARHGEF37 (ENSCPBG00000007872)	ENSCPBG00000007862	CSNK1A1 (ENSCPBG00000007854)	IL17B (ENSCPBG00000007844)	PCYOX1L (ENSCPBG00000007839)	GRPEL2 (ENSCPBG00000007831)	AFAP1L1 (ENSCPBG00000007799)	ABLIM3 (ENSCPBG00000007739)	SH3TC2 (ENSCPBG00000007700)	ADRB2 (ENSCPBG00000007688)	UBTD2 (ENSCPBG00000007679) #22	EFCAB9 (ENSCPBG00000007673) #23	STK10 (ENSCPBG00000007660) #25	SH3PXD2B (ENSCPBG00000007639) #21	NEURL1B (ENSCPBG00000007630) #20	DUSP1 (ENSCPBG00000007611) #19	ENSCPBG00000007606	ERGIC1 (ENSCPBG00000007601) #18	RPL26 (ENSCPBG00000007593) ##17	ATP6V0E1 (ENSCPBG00000007589) #16	CREBRF (ENSCPBG00000007577) #15	BNIP1 (ENSCPBG00000007566) #14	NKX2-5 (ENSCPBG00000007563) #13	STC2 (ENSCPBG00000007560) #12	ENSCPBG00000007551 #11	CPEB4 (ENSCPBG00000007535) #10
Testudinidae	ANCESTRAL SPECIES	16	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Goode s thornscrub tortoise	MODERN SPECIES	22	HTR4 (ENSGEVG00005010911)	SLC26A2 (ENSGEVG00005010871)	ENSGEVG00005010816	PPARGC1B (ENSGEVG00005010716)	ARHGEF37 (ENSGEVG00005010677)	ENSGEVG00005010620	CSNK1A1 (ENSGEVG00005010496)	IL17B (ENSGEVG00005010426)	PCYOX1L (ENSGEVG00005010405)	GRPEL2 (ENSGEVG00005010390)	AFAP1L1 (ENSGEVG00005010272)	ENSGEVG00005010177	ENSGEVG00005009824	SH3TC2 (ENSGEVG00005009752)	ADRB2 (ENSGEVG00005009673)	UBTD2 (ENSGEVG00005009650) #22	EFCAB9 (ENSGEVG00005009608) #23	STK10 (ENSGEVG00005009569) #25	ENSGEVG00005009428 #21	ENSGEVG00005009402 #21	NEURL1B (ENSGEVG00005009384) #20	DUSP1 (ENSGEVG00005009360) #19	ERGIC1 (ENSGEVG00005009233) #18	RPL26 (ENSGEVG00005009170) ##17	ATP6V0E1 (ENSGEVG00005009147) #16	CREBRF (ENSGEVG00005009119) #15	BNIP1 (ENSGEVG00005009102) #14	NKX2-5 (ENSGEVG00005009080) #13	STC2 (ENSGEVG00005009015) #12	ENSGEVG00005008890 #11	CPEB4 (ENSGEVG00005008855) #10
Abingdon island giant tortoise	MODERN SPECIES	2182																UBTD2 (ENSCABG00000014580) #22	EFCAB9 (ENSCABG00000014578) #23	STK10 (ENSCABG00000014196) #25	ENSCABG00000014175 #21	ENSCABG00000014173 #21	NEURL1B (ENSCABG00000014167) #20	DUSP1 (ENSCABG00000014155) #19	ERGIC1 (ENSCABG00000014150) #18	RPL26 (ENSCABG00000014147) ##17	ATP6V0E1 (ENSCABG00000014145) #16	CREBRF (ENSCABG00000014125) #15	BNIP1 (ENSCABG00000014124) #14	NKX2-5 (ENSCABG00000014122) #13	STC2 (ENSCABG00000014121) #12	ENSCABG00000014117 #11	CPEB4 (ENSCABG00000014114) #10
Chinese turtle	MODERN SPECIES	2220	IL12B (ENSPSIG00000018025)	FBXO38 (ENSPSIG00000005569)	HTR4 (ENSPSIG00000006016)	SLC26A2 (ENSPSIG00000007690)	PPARGC1B (ENSPSIG00000008358)	ARHGEF37 (ENSPSIG00000011066)	ENSPSIG00000000250	CSNK1A1 (ENSPSIG00000012179)	IL17B (ENSPSIG00000013786)	PCYOX1L (ENSPSIG00000013871)	GRPEL2 (ENSPSIG00000015124)	AFAP1L1 (ENSPSIG00000015614)	ABLIM3 (ENSPSIG00000006198)	SH3TC2 (ENSPSIG00000007989)	ADRB2 (ENSPSIG00000008710)	UBTD2 (ENSPSIG00000009210) #22	EFCAB9 (ENSPSIG00000009216) #23	STK10 (ENSPSIG00000009241) #25	SH3PXD2B (ENSPSIG00000010303) #21	NEURL1B (ENSPSIG00000010315) #20	DUSP1 (ENSPSIG00000011093) #19	ERGIC1 (ENSPSIG00000011786) #18	RPL26 (ENSPSIG00000013153) ##17	ATP6V0E1 (ENSPSIG00000013593) #16	CREBRF (ENSPSIG00000013820) #15	BNIP1 (ENSPSIG00000014624) #14	NKX2-5 (ENSPSIG00000014981) #13	STC2 (ENSPSIG00000015246) #12
Archosauria	ANCESTRAL SPECIES	17	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a
Australian saltwater crocodile	MODERN SPECIES	34	ENSCPRG00005007158	SLC26A2 (ENSCPRG00005007205)	ENSCPRG00005007213	ENSCPRG00005007214	PPARGC1B (ENSCPRG00005007224)	ARHGEF37 (ENSCPRG00005007253)	ENSCPRG00005007347	CSNK1A1 (ENSCPRG00005007410)	IL17B (ENSCPRG00005007697)	PCYOX1L (ENSCPRG00005007700)	GRPEL2 (ENSCPRG00005007705)	AFAP1L1 (ENSCPRG00005007715)	ABLIM3 (ENSCPRG00005007745)	SH3TC2 (ENSCPRG00005007768)	ADRB2 (ENSCPRG00005007778)	UBTD2 (ENSCPRG00005007804) #22	EFCAB9 (ENSCPRG00005007806) #23	STK10 (ENSCPRG00005007810) #25	SH3PXD2B (ENSCPRG00005007836) #21	NEURL1B (ENSCPRG00005007875) #20	DUSP1 (ENSCPRG00005007884) #19	ERGIC1 (ENSCPRG00005007890) #18	RPL26 (ENSCPRG00005007902) ##17	ATP6V0E1 (ENSCPRG00005007904) #16	CREBRF (ENSCPRG00005007915) #15	BNIP1 (ENSCPRG00005007919) #14	NKX2-5 (ENSCPRG00005007932) #13	STC2 (ENSCPRG00005007937) #12	ENSCPRG00005007939 #11	CPEB4 (ENSCPRG00005007956) #10	NSG2 (ENSCPRG00005007959)
Aves	ANCESTRAL SPECIES	15	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a	ENSGT00940000159824
African ostrich	MODERN SPECIES	151	ENSSCUG00000002920	ENSSCUG00000002919	ARSI (ENSSCUG00000002918)	ENSSCUG00000002917	CD74 (ENSSCUG00000002916)	ARHGEF37 (ENSSCUG00000002913)	ENSSCUG00000002910	ENSSCUG00000002909	IL17B (ENSSCUG00000002907)	PCYOX1L (ENSSCUG00000002906)	GRPEL2 (ENSSCUG00000002905)	AFAP1L1 (ENSSCUG00000002902)	ABLIM3 (ENSSCUG00000002892)	SH3TC2 (ENSSCUG00000002891)	ADRB2 (ENSSCUG00000002887)	UBTD2 (ENSSCUG00000002885) #22	STK10 (ENSSCUG00000002883) #25	SH3PXD2B (ENSSCUG00000002881) #21	NEURL1B (ENSSCUG00000002876) #20	DUSP1 (ENSSCUG00000002873) #19	ERGIC1 (ENSSCUG00000002870) #18	RPL26 (ENSSCUG00000002868) ##17	ENSSCUG00000002866	CREBRF (ENSSCUG00000002864) #15	BNIP1 (ENSSCUG00000002862) #14	NKX2-5 (ENSSCUG00000002861) #13
Neognathae	ANCESTRAL SPECIES	14	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00960000189351	ENSGT00390000000483.a.a
Galloanserae	ANCESTRAL SPECIES	14	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00960000189351	ENSGT00390000000483.a.a
Anatidae	ANCESTRAL SPECIES	15	ENSGT00390000008582	ENSGT00940000153169.A.b.a	ENSGT00940000154108.a	ENSGT00940000159674.c	ENSGT00940000158778	ENSGT00950000183162.a.a	ENSGT00940000165340	ENSGT00390000009786	ENSGT00940000156901.A	ENSGT00940000160970	ENSGT00940000153768.b	ENSGT00940000163328	ENSGT00390000001803	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396.i #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00960000189351	ENSGT00390000000483.a.a
Pink-footed goose	MODERN SPECIES	9	UBE2D2 (ENSABRG00000014309)	CXXC5 (ENSABRG00000014324)	PSD2 (ENSABRG00000014335)	NRG2 (ENSABRG00000014354)	PURA (ENSABRG00000014361)	ENSABRG00000014366	PFDN1 (ENSABRG00000014368)	HBEGF (ENSABRG00000014370)	SLC4A9 (ENSABRG00000014373)	ANKHD1 (ENSABRG00000014545)	SRA1 (ENSABRG00000014976)	ENSABRG00000014986	ENSABRG00000014990	SH3TC2 (ENSABRG00000014994)	ADRB2 (ENSABRG00000015003)	UBTD2 (ENSABRG00000015011) #22	STK10 (ENSABRG00000015024) #25	SH3PXD2B (ENSABRG00000015043) #21	NEURL1B (ENSABRG00000015049) #20	DUSP1 (ENSABRG00000015058) #19	ERGIC1 (ENSABRG00000015062) #18	RPL26 (ENSABRG00000015065) ##17	ATP6V0E1 (ENSABRG00000015067) #16	CREBRF (ENSABRG00000015069) #15	BNIP1 (ENSABRG00000015071) #14	NKX2-5 (ENSABRG00000015089) #13	STC2 (ENSABRG00000015092) #12	ENSABRG00000015097 #11	CPEB4 (ENSABRG00000015105) #10	ENSABRG00000015107	NSG2 (ENSABRG00000015110)
Duck	MODERN SPECIES	5	PCDHAC1 (ENSAPLG00000029593)	PCDHAC2 (ENSAPLG00000003839)	ENSAPLG00000023692	ENSAPLG00000014766	NRG2 (ENSAPLG00000015077)	ENSAPLG00000019867	PFDN1 (ENSAPLG00000015211)	HBEGF (ENSAPLG00000015272)	SLC4A9 (ENSAPLG00000015338)	ENSAPLG00000002418	ENSAPLG00000024900	EIF4EBP3 (ENSAPLG00000021696)	ENSAPLG00000002721	SH3TC2 (ENSAPLG00000002842)	ADRB2 (ENSAPLG00000001729)	UBTD2 (ENSAPLG00000003246) #22	ENSAPLG00000023824	STK10 (ENSAPLG00000003252) #25	ENSAPLG00000003738 #21	ENSAPLG00000027587 #21	NEURL1B (ENSAPLG00000014967) #20	DUSP1 (ENSAPLG00000015094) #19	ERGIC1 (ENSAPLG00000015229) #18	RPL26 (ENSAPLG00000015384) ##17	ATP6V0E1 (ENSAPLG00000015489) #16	CREBRF (ENSAPLG00000015493) #15	BNIP1 (ENSAPLG00000019770) #14	NKX2-5 (ENSAPLG00000027109) #13	STC2 (ENSAPLG00000002303) #12	ENSAPLG00000002435 #11	CPEB4 (ENSAPLG00000022911) #10
Phasianidae	ANCESTRAL SPECIES	14	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b.h	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00960000189351	ENSGT00390000000483.a.a
Japanese quail	MODERN SPECIES	4	FBXO38 (ENSCJPG00005008781)	HTR4 (ENSCJPG00005008783)	ENSCJPG00005008787	SLC26A2 (ENSCJPG00005008790)	ENSCJPG00005008791	PPARGC1B (ENSCJPG00005008794)	ARHGEF37 (ENSCJPG00005008801)	CSNK1A1 (ENSCJPG00005008802)	IL17B (ENSCJPG00005008805)	PCYOX1L (ENSCJPG00005008806)	GRPEL2 (ENSCJPG00005008807)	AFAP1L1 (ENSCJPG00005008808)	ABLIM3 (ENSCJPG00005008809)	SH3TC2 (ENSCJPG00005008812)	ADRB2 (ENSCJPG00005008819)	UBTD2 (ENSCJPG00005008822) #22	STK10 (ENSCJPG00005008823) #25	SH3PXD2B (ENSCJPG00005008824) #21	NEURL1B (ENSCJPG00005008825) #20	DUSP1 (ENSCJPG00005008826) #19	ERGIC1 (ENSCJPG00005008827) #18	RPL26 (ENSCJPG00005008829) ##17	ATP6V0E1 (ENSCJPG00005008830) #16	CREBRF (ENSCJPG00005008833) #15	BNIP1 (ENSCJPG00005008834) #14	NKX2-5 (ENSCJPG00005008835) #13	STC2 (ENSCJPG00005008836) #12	ENSCJPG00005008838 #11	CPEB4 (ENSCJPG00005008840) #10	ENSCJPG00005008841	NSG2 (ENSCJPG00005008842)
Phasianidae_b	ANCESTRAL SPECIES	18	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b.h	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00960000189351	ENSGT00390000000483.a.a
Chicken	MODERN SPECIES	4	HTR4 (ENSGALG00010008169)	ENSGALG00010008173	SLC26A2 (ENSGALG00010008174)	ENSGALG00010008187	ENSGALG00010008195	PPARGC1B (ENSGALG00010008209)	ARHGEF37 (ENSGALG00010008217)	CSNK1A1 (ENSGALG00010011991)	IL17B (ENSGALG00010011754)	PCYOX1L (ENSGALG00010011764)	GRPEL2 (ENSGALG00010011784)	AFAP1L1 (ENSGALG00010011745)	ABLIM3 (ENSGALG00010012297)	SH3TC2 (ENSGALG00010012312)	ADRB2 (ENSGALG00010012314)	UBTD2 (ENSGALG00010012327) #22	STK10 (ENSGALG00010012358) #25	SH3PXD2B (ENSGALG00010012382) #21	NEURL1B (ENSGALG00010012391) #20	DUSP1 (ENSGALG00010008227) #19	ERGIC1 (ENSGALG00010009117) #18	RPL26L1 (ENSGALG00010009170) ##17	ATP6V0E1 (ENSGALG00010009228) #16	CREBRF (ENSGALG00010009256) #15	BNIP1 (ENSGALG00010009311) #14	NKX2-5 (ENSGALG00010009324) #13	STC2 (ENSGALG00010009346) #12	ENSGALG00010009378 #11	CPEB4 (ENSGALG00010009389) #10	ENSGALG00010009397	HMP19 (ENSGALG00010009415)
Turkey	MODERN SPECIES	6	IL12B (ENSMGAG00000003001)	ENSMGAG00000018749	ENSMGAG00000003033	ENSMGAG00000003088	ENSMGAG00000003112	SLC26A2 (ENSMGAG00000003118)	ENSMGAG00000022852	ENSMGAG00000003134	ARHGEF37 (ENSMGAG00000003214)	CSNK1A1 (ENSMGAG00000003239)	ENSMGAG00000021310	PCYOX1L (ENSMGAG00000003301)	AFAP1L1 (ENSMGAG00000003323)	ENSMGAG00000003360	ADRB2 (ENSMGAG00000022062)	ENSMGAG00000003447 #22	ENSMGAG00000003464 #25	SH3PXD2B (ENSMGAG00000003508) #21	ENSMGAG00000003546 #20	DUSP1 (ENSMGAG00000003557) #19	ERGIC1 (ENSMGAG00000003565) #18	ENSMGAG00000003585 ##17	CREBRF (ENSMGAG00000003597) #15	BNIP1 (ENSMGAG00000003611) #14	NKX2-5 (ENSMGAG00000021311) #13	STC2 (ENSMGAG00000019072) #12	ENSMGAG00000003652 #11	CPEB4 (ENSMGAG00000003660) #10	NSG2 (ENSMGAG00000003692)	MSX2 (ENSMGAG00000003712)	DRD1 (ENSMGAG00000015442)
Neognathae_b	ANCESTRAL SPECIES	16	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00960000189351	ENSGT00390000000483.a.a
Neognathae_c	ANCESTRAL SPECIES	19	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a	ENSGT00940000159824	ENSGT00940000155857
Golden eagle	MODERN SPECIES	14	HTR4 (ENSACCG00020016661)	ENSACCG00020011572	SLC26A2 (ENSACCG00020011604)	ENSACCG00020011626	ENSACCG00020011667	PPARGC1B (ENSACCG00020011712)	ARHGEF37 (ENSACCG00020011768)	CSNK1A1 (ENSACCG00020011837)	IL17B (ENSACCG00020011884)	PCYOX1L (ENSACCG00020011932)	GRPEL2 (ENSACCG00020011972)	AFAP1L1 (ENSACCG00020012061)	ABLIM3 (ENSACCG00020012238)	SH3TC2 (ENSACCG00020012431)	ADRB2 (ENSACCG00020012531)	UBTD2 (ENSACCG00020012552) #22	STK10 (ENSACCG00020012579) #25	SH3PXD2B (ENSACCG00020012626) #21	NEURL1B (ENSACCG00020012648) #20	DUSP1 (ENSACCG00020012672) #19	ENSACCG00020012686	ERGIC1 (ENSACCG00020012710) #18	RPL26 (ENSACCG00020012774) ##17	CREBRF (ENSACCG00020012815) #15	BNIP1 (ENSACCG00020012856) #14	NKX2-5 (ENSACCG00020012874) #13	STC2 (ENSACCG00020012896) #12	ENSACCG00020012917 #11	CPEB4 (ENSACCG00020012959) #10	NSG2 (ENSACCG00020012980)	MSX2 (ENSACCG00020012994)
Kakapo	MODERN SPECIES	6	ENSSHBG00005018064	SLC26A2 (ENSSHBG00005018055)	ENSSHBG00005018051	ENSSHBG00005018047	PPARGC1B (ENSSHBG00005018033)	ARHGEF37 (ENSSHBG00005018029)	ENSSHBG00005018025	CSNK1A1 (ENSSHBG00005018017)	IL17B (ENSSHBG00005018010)	PCYOX1L (ENSSHBG00005018008)	GRPEL2 (ENSSHBG00005018006)	AFAP1L1 (ENSSHBG00005018003)	ABLIM3 (ENSSHBG00005018000)	SH3TC2 (ENSSHBG00005017984)	ADRB2 (ENSSHBG00005017975)	UBTD2 (ENSSHBG00005017971) #22	STK10 (ENSSHBG00005016343) #25	SH3PXD2B (ENSSHBG00005016219) #21	NEURL1B (ENSSHBG00005016201) #20	DUSP1 (ENSSHBG00005016192) #19	ERGIC1 (ENSSHBG00005016189) #18	RPL26 (ENSSHBG00005016182) ##17	CREBRF (ENSSHBG00005016175) #15	BNIP1 (ENSSHBG00005016165) #14	NKX2-5 (ENSSHBG00005016162) #13	STC2 (ENSSHBG00005016156) #12	ENSSHBG00005016151 #11	CPEB4 (ENSSHBG00005016128) #10	NSG2 (ENSSHBG00005016125)	MSX2 (ENSSHBG00005016120)	DRD1 (ENSSHBG00005016119)
Passeriformes	ANCESTRAL SPECIES	14	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00960000189351	ENSGT00390000000483.a.a
Great tit	MODERN SPECIES	4	ENSPMJG00000006344	SLC26A2 (ENSPMJG00000006346)	ENSPMJG00000006348	ENSPMJG00000006353	ENSPMJG00000006357	PPARGC1B (ENSPMJG00000006359)	ARHGEF37 (ENSPMJG00000006361)	CSNK1A1 (ENSPMJG00000006380)	IL17B (ENSPMJG00000006386)	PCYOX1L (ENSPMJG00000006393)	GRPEL2 (ENSPMJG00000006401)	AFAP1L1 (ENSPMJG00000006405)	ABLIM3 (ENSPMJG00000006419)	SH3TC2 (ENSPMJG00000006424)	ADRB2 (ENSPMJG00000006425)	UBTD2 (ENSPMJG00000006444) #22	STK10 (ENSPMJG00000006445) #25	SH3PXD2B (ENSPMJG00000006447) #21	NEURL1B (ENSPMJG00000006456) #20	DUSP1 (ENSPMJG00000006458) #19	ERGIC1 (ENSPMJG00000006461) #18	RPL26 (ENSPMJG00000006464) ##17	CREBRF (ENSPMJG00000006480) #15	BNIP1 (ENSPMJG00000006485) #14	NKX2-5 (ENSPMJG00000006487) #13	STC2 (ENSPMJG00000006490) #12	ENSPMJG00000006523 #11	CPEB4 (ENSPMJG00000006528) #10	ENSPMJG00000006535	NSG2 (ENSPMJG00000006538)	MSX2 (ENSPMJG00000006547)
Passeriformes_d	ANCESTRAL SPECIES	15	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a	ENSGT00940000159824
Flycatcher	MODERN SPECIES	4	ENSFALG00000028330	ENSFALG00000026287	PPARGC1B (ENSFALG00000008858)	ARHGEF37 (ENSFALG00000008850)	ENSFALG00000008853	ENSFALG00000025562	CSNK1A1 (ENSFALG00000028539)	ENSFALG00000025781	IL17B (ENSFALG00000025253)	PCYOX1L (ENSFALG00000008842)	GRPEL2 (ENSFALG00000008841)	AFAP1L1 (ENSFALG00000008840)	ABLIM3 (ENSFALG00000008837)	SH3TC2 (ENSFALG00000008835)	ADRB2 (ENSFALG00000014433)	ENSFALG00000008833 #22	ENSFALG00000008830 #25	SH3PXD2B (ENSFALG00000008827) #21	ENSFALG00000008824 #20	DUSP1 (ENSFALG00000008823) #19	ERGIC1 (ENSFALG00000008820) #18	ENSFALG00000008818 ##17	ATP6V0E1 (ENSFALG00000008817) #16	CREBRF (ENSFALG00000008816) #15	ENSFALG00000008815	NKX2-5 (ENSFALG00000008813) #13	STC2 (ENSFALG00000025551) #12	ENSFALG00000008811 #11	CPEB4 (ENSFALG00000008809) #10	NSG2 (ENSFALG00000027426)	MSX2 (ENSFALG00000014415)
Passeriformes_g	ANCESTRAL SPECIES	15	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a	ENSGT00940000159824
Medium ground finch	MODERN SPECIES	11	ENSGFOG00000010669	SLC26A2 (ENSGFOG00000010656)	ENSGFOG00000010647	ENSGFOG00000010644	PPARGC1B (ENSGFOG00000010638)	ARHGEF37 (ENSGFOG00000010621)	CSNK1A1 (ENSGFOG00000010614)	ENSGFOG00000010610	IL17B (ENSGFOG00000010605)	PCYOX1L (ENSGFOG00000010603)	GRPEL2 (ENSGFOG00000010597)	AFAP1L1 (ENSGFOG00000010583)	ABLIM3 (ENSGFOG00000010564)	ENSGFOG00000010556	ADRB2 (ENSGFOG00000010549)	UBTD2 (ENSGFOG00000010545) #22	STK10 (ENSGFOG00000007164) #25	SH3PXD2B (ENSGFOG00000007045) #21	NEURL1B (ENSGFOG00000007039) #20	DUSP1 (ENSGFOG00000007032) #19	ERGIC1 (ENSGFOG00000007022) #18	RPL26 (ENSGFOG00000007011) ##17	ATP6V0E1 (ENSGFOG00000007006) #16	CREBRF (ENSGFOG00000006997) #15	BNIP1 (ENSGFOG00000006991) #14	NKX2-5 (ENSGFOG00000006986) #13	STC2 (ENSGFOG00000006981) #12	CPEB4 (ENSGFOG00000006967) #10	NSG2 (ENSGFOG00000006955)	ENSGFOG00000006950	MSX2 (ENSGFOG00000006943)
Passeroidea	ANCESTRAL SPECIES	15	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##17	ENSGT00940000156866 #16	ENSGT00390000007125.b #15	ENSGT00390000014412 #14	ENSGT00940000158996 #13	ENSGT00390000005989.a #12	ENSGT00940000154979 #11	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a	ENSGT00940000159824
Zebra finch	MODERN SPECIES	4	FBXO38 (ENSTGUG00000000212)	HTR4 (ENSTGUG00000000218)	ENSTGUG00000000226	SLC26A2 (ENSTGUG00000000228)	ENSTGUG00000020371	PPARGC1B (ENSTGUG00000000232)	ARHGEF37 (ENSTGUG00000000241)	CSNK1A1 (ENSTGUG00000000243)	IL17B (ENSTGUG00000000251)	PCYOX1L (ENSTGUG00000000252)	GRPEL2 (ENSTGUG00000027926)	AFAP1L1 (ENSTGUG00000000263)	ABLIM3 (ENSTGUG00000000269)	SH3TC2 (ENSTGUG00000000277)	ADRB2 (ENSTGUG00000000286)	UBTD2 (ENSTGUG00000029278) #22	STK10 (ENSTGUG00000000289) #25	SH3PXD2B (ENSTGUG00000022640) #21	NEURL1B (ENSTGUG00000000298) #20	DUSP1 (ENSTGUG00000000299) #19	ERGIC1 (ENSTGUG00000000300) #18	RPL26 (ENSTGUG00000000309) ##17	ENSTGUG00000026118	CREBRF (ENSTGUG00000000314) #15	BNIP1 (ENSTGUG00000000316) #14	NKX2-5 (ENSTGUG00000020969) #13	STC2 (ENSTGUG00000029550) #12	ENSTGUG00000000324 #11	CPEB4 (ENSTGUG00000000329) #10	ENSTGUG00000021029	NSG2 (ENSTGUG00000000333)
Common canary	MODERN SPECIES	16	FBXO38 (ENSSCAG00000001522)	HTR4 (ENSSCAG00000001475)	ENSSCAG00000001469	SLC26A2 (ENSSCAG00000001463)	ENSSCAG00000001456	PPARGC1B (ENSSCAG00000001426)	ARHGEF37 (ENSSCAG00000001410)	CSNK1A1 (ENSSCAG00000001399)	IL17B (ENSSCAG00000001387)	PCYOX1L (ENSSCAG00000001381)	GRPEL2 (ENSSCAG00000001377)	AFAP1L1 (ENSSCAG00000001363)	ABLIM3 (ENSSCAG00000001170)	SH3TC2 (ENSSCAG00000001099)	ADRB2 (ENSSCAG00000001083)	UBTD2 (ENSSCAG00000001079) #22	STK10 (ENSSCAG00000000397) #25	SH3PXD2B (ENSSCAG00000000168) #21	NEURL1B (ENSSCAG00000000152) #20	SFXN1 (ENSSCAG00000000132)	KIF20A (ENSSCAG00000000091)	BRD8 (ENSSCAG00000000078)	ENSSCAG00000000068	NHP2 (ENSSCAG00000000066)	N4BP3 (ENSSCAG00000000064)	LMAN2 (ENSSCAG00000000058)	ENSSCAG00000000054	RGS14 (ENSSCAG00000000049)	ENSSCAG00000000046	SLC34A1 (ENSSCAG00000000044)	ENSSCAG00000000041
Anura	ANCESTRAL SPECIES		ENSGT01090000260260	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00940000161330	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #25	ENSGT00390000004149	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00940000154909	ENSGT00510000049083	ENSGT00950000182953.C.c	ENSGT00390000008694.b.b
Leishan spiny toad	MODERN SPECIES	6	ARHGEF37 (ENSLLEG00000010958)	ENSLLEG00000010913	CSNK1A1 (ENSLLEG00000010398)	IL17B (ENSLLEG00000010266)	PCYOX1L (ENSLLEG00000010203)	GRPEL2 (ENSLLEG00000010154)	AFAP1L1 (ENSLLEG00000009809)	ABLIM3 (ENSLLEG00000008655)	ENSLLEG00000008540	ENSLLEG00000008519	SH3TC2 (ENSLLEG00000008218)	ENSLLEG00000008172	ENSLLEG00000008163	ADRB2 (ENSLLEG00000008145)	ENSLLEG00000008087	UBTD2 (ENSLLEG00000008051) #22	STK10 (ENSLLEG00000007889) #25	SH3PXD2B (ENSLLEG00000007755) #21	NEURL1B (ENSLLEG00000007712) #20	ENSLLEG00000007700	ENSLLEG00000007690	ENSLLEG00000007678	DUSP1 (ENSLLEG00000007651) #19	ERGIC1 (ENSLLEG00000007494) #18	ENSLLEG00000007449 ##17	ATP6V0E1 (ENSLLEG00000007416) #16	CREBRF (ENSLLEG00000007256) #15	BNIP1 (ENSLLEG00000007209) #14	NKX2-5 (ENSLLEG00000007176) #13	STC2 (ENSLLEG00000007140) #12	ENSLLEG00000007121
Frog	MODERN SPECIES	3	ENSXETG00000045329	pou4f3 (ENSXETG00000041097)	GPR151 (ENSXETG00000002325)	ENSXETG00000046970	ppp2r2b (ENSXETG00000020864)	csnk1a1 (ENSXETG00000020861)	pcyox1l (ENSXETG00000033269)	ENSXETG00000048140	grpel2 (ENSXETG00000020835)	afap1l1 (ENSXETG00000032942)	ablim3 (ENSXETG00000030469)	ENSXETG00000047343	sh3tc2 (ENSXETG00000030692)	ENSXETG00000045119	adrb2 (ENSXETG00000037096)	ubtd2 (ENSXETG00000014428) #22	ENSXETG00000042783	stk10 (ENSXETG00000014423) #25	pole4 (ENSXETG00000014422)	sh3pxd2b (ENSXETG00000038056) #21	ENSXETG00000042376	ENSXETG00000040995	neurl1b (ENSXETG00000001703) #20	ergic1 (ENSXETG00000018301) #18	dusp1 (ENSXETG00000027880) #19	tlr22 (ENSXETG00000046119)	sfxn1 (ENSXETG00000035035)	drd1 (ENSXETG00000013921)	msx2 (ENSXETG00000009168)	ENSXETG00000041565	nsg2 (ENSXETG00000009166)
Coelacanth	MODERN SPECIES	350														ADRB2 (ENSLACG00000003531)	ENSLACG00000006931	UBTD2 (ENSLACG00000008618) #22	EFCAB9 (ENSLACG00000009380) #23	STK10 (ENSLACG00000010317) #25	SH3PXD2B (ENSLACG00000011512) #21	ENSLACG00000022527	NEURL1B (ENSLACG00000012188) #20	DUSP1 (ENSLACG00000013873) #19	ERGIC1 (ENSLACG00000014277) #18	ATP6V0E1 (ENSLACG00000014424) #16	ENSLACG00000014584 #15	BNIP1 (ENSLACG00000014693) #14	NKX2-5 (ENSLACG00000014905) #13	STC2 (ENSLACG00000015101) #12	ENSLACG00000015630 #11	CPEB4 (ENSLACG00000016073) #10	MSX2 (ENSLACG00000016991)
Actinopterygii	ANCESTRAL SPECIES	103	ENSGT00940000154998.a.a #10	ENSGT00940000154979 #11	ENSGT00390000005989.a #12	ENSGT00940000158996 #13	ENSGT00390000014412 #14	ENSGT00390000007125.b #15	ENSGT00940000156866 #16	ENSGT00390000014165 #17	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00390000012630.A	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b	ENSGT00950000182859.A.a.a.a	ENSGT00940000156141.C	ENSGT00950000182932.A.b.a.a.a	ENSGT00950000182859.A.a.b.a.b	ENSGT00940000155650	ENSGT00390000012944	ENSGT00390000011705	ENSGT00940000159624
Reedfish	MODERN SPECIES	2	BOD1 (ENSECRG00000012812) #11	stc2a (ENSECRG00000012818) #12	nkx2.5 (ENSECRG00000012831) #13	BNIP1 (ENSECRG00000012841) #14	BNIP1 (ENSECRG00000012851) #14	CREBRF (ENSECRG00000012865) #15	ATP6V0E1 (ENSECRG00000012875) #16	rpl26 (ENSECRG00000012885) #17	IL17B (ENSECRG00000012898)	PCYOX1L (ENSECRG00000012911)	grpel2 (ENSECRG00000012927)	afap1l1a (ENSECRG00000012954)	ablim3 (ENSECRG00000012996)	SH3TC2 (ENSECRG00000013029)	adrb2a (ENSECRG00000013059)	ubtd2 (ENSECRG00000013076) #22	ENSECRG00000013124	ENSECRG00000013178	sfxn1 (ENSECRG00000013247)	JAKMIP2 (ENSECRG00000013354)	dpysl3 (ENSECRG00000013511)	STK32A (ENSECRG00000013551)	stk10 (ENSECRG00000013572) #25	SH3PXD2B (ENSECRG00000013596) #21	ENSECRG00000013610	ATP10B (ENSECRG00000013627)	mgst3a (ENSECRG00000013670)	gabrb2a (ENSECRG00000013694)	ENSECRG00000013748	gabra1 (ENSECRG00000013884)	GABRG2 (ENSECRG00000014086)
Neopterygii	ANCESTRAL SPECIES	24											ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538.g	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00390000012630.A	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b	ENSGT00950000182859.A.a.a.a	ENSGT00940000156141.C	ENSGT00950000182932.A.b.a.b	ENSGT00950000182859.A.a.b.a.b	ENSGT00940000155650	ENSGT00390000012944	ENSGT00390000011705	ENSGT00940000159624	ENSGT00940000157770	ENSGT01030000234518.A.a.b
Osteoglossocephalai	ANCESTRAL SPECIES	77	ENSGT00940000157061.b	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00730000112008	ENSGT00950000183067.a.b.a.d	ENSGT00940000156835	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000159538.g.b	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b	ENSGT00940000155650.a.a	ENSGT00390000012944	ENSGT00390000011705	ENSGT00940000159624	ENSGT00950000182859.A.a.b.a.b	ENSGT00940000155650.a.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b
Osteoglossiformes	ANCESTRAL SPECIES	23	ENSGT00500000044831.a.a.b.a	ENSGT00940000158850	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000164576.b.a.a	ENSGT00550000074939	ENSGT00390000005589.a.b.n	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.k	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000156641 #22	ENSGT00390000012630.A.b	ENSGT00940000157281.x	ENSGT00950000182859.A.a.b.b.a	ENSGT00940000155650.a.a	ENSGT00390000012944	ENSGT00390000011705	ENSGT00940000159624.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00940000160854	ENSGT00390000014165 #17	ENSGT00940000156866 #16	ENSGT01030000238653	ENSGT00390000007125.b.h #15
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	102	ENSPKIG00000017948	ENSPKIG00000017935	ENSPKIG00000017927	timd4 (ENSPKIG00000017892)	ENSPKIG00000017864	ENSPKIG00000017830	fam53c (ENSPKIG00000017801)	zmat2 (ENSPKIG00000017778)	lcp2a (ENSPKIG00000017751)	ENSPKIG00000017711	grpel2 (ENSPKIG00000017691)	afap1l1b (ENSPKIG00000017659)	ablim3 (ENSPKIG00000017594)	adrb2b (ENSPKIG00000017550)	ENSPKIG00000017541	ubtd2 (ENSPKIG00000017530) #22	ENSPKIG00000017501	ublcp1 (ENSPKIG00000017480)	RNF145 (ENSPKIG00000017449)	EBF1 (ENSPKIG00000017357)
P. kingsleyae	MODERN SPECIES	407																ubtd2 (ENSPKIG00000002109) #22	il12ba (ENSPKIG00000002145)	RNF145 (ENSPKIG00000002192)	EBF1 (ENSPKIG00000002259)	clint1a (ENSPKIG00000002366)	LSM11 (ENSPKIG00000002386)	thg1l (ENSPKIG00000002407)	ENSPKIG00000002429	ENSPKIG00000002484	tcerg1a (ENSPKIG00000002573)	GPR151 (ENSPKIG00000002624)	PPP2R2B (ENSPKIG00000002647)	IL17B (ENSPKIG00000002711)	rpl26 (ENSPKIG00000002725) #17	atp6v0e1 (ENSPKIG00000002748) #16	CREBRF (ENSPKIG00000002819) #15
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	19	PWWP2A (ENSSFOG00015022869)	ENSSFOG00015029758	ENSSFOG00015022917	timd4 (ENSSFOG00015022926)	ENSSFOG00015022932	ENSSFOG00015022938	fam53c (ENSSFOG00015033270)	ENSSFOG00015022968	zmat2 (ENSSFOG00015022982)	lcp2a (ENSSFOG00015022992)	foxi3a (ENSSFOG00015028060)	grpel2 (ENSSFOG00015030367)	afap1l1b (ENSSFOG00015023026)	ablim3 (ENSSFOG00015023081)	adrb2b (ENSSFOG00015030060)	ubtd2 (ENSSFOG00015030397) #22	ENSSFOG00015024617	ublcp1 (ENSSFOG00015023175)	RNF145 (ENSSFOG00015023193)	EBF1 (ENSSFOG00015023208)	ENSSFOG00015023239	CLINT1 (ENSSFOG00015023249)	TCERG1 (ENSSFOG00015023283)	ENSSFOG00015000086	PCYOX1L (ENSSFOG00015024935)	atp6v0e1 (ENSSFOG00015026286) #16	CREBRF (ENSSFOG00015000199) #15	stc2a (ENSSFOG00015000247) #12	bod1 (ENSSFOG00015000254)	CPEB4 (ENSSFOG00015000264) #10	nsg2 (ENSSFOG00015000318)
Asian bonytongue	MODERN SPECIES	4	ENSSFOG00015016829	gria1a (ENSSFOG00015016777)	ENSSFOG00015027769	WNT8A (ENSSFOG00015016952)	ENSSFOG00015016865	ENSSFOG00015027779	foxi3b (ENSSFOG00015017028)	nhp2 (ENSSFOG00015032223)	ENSSFOG00015017077	pttg1 (ENSSFOG00015017097)	grpel2 (ENSSFOG00015017109)	afap1l1a (ENSSFOG00015017127)	ablim3 (ENSSFOG00015017193)	SH3TC2 (ENSSFOG00015017275)	adrb2a (ENSSFOG00015017309)	ENSSFOG00015017328 #22	RNF145 (ENSSFOG00015017406)	EBF1 (ENSSFOG00015017450)	clint1a (ENSSFOG00015017553)	LSM11 (ENSSFOG00015025495)	thg1l (ENSSFOG00015017619)	ADAM19 (ENSSFOG00015017640)	tcerg1a (ENSSFOG00015017666)	GPR151 (ENSSFOG00015017703)	PPP2R2B (ENSSFOG00015031806)	IL17B (ENSSFOG00015017749)	rpl26 (ENSSFOG00015026723) #17	ENSSFOG00015017779	CREBRF (ENSSFOG00015017854) #15	BNIP1 (ENSSFOG00015026362) #14	nkx2.5 (ENSSFOG00015017890) #13
Clupeocephala	ANCESTRAL SPECIES	11	ENSGT00940000159349	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00950000182934.b	ENSGT00940000156944.a.b	ENSGT00940000161609	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k	ENSGT00940000161176	ENSGT00940000156835.l.b	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00940000159538.g.b	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d	ENSGT00940000155650.a.a	ENSGT00390000012944	ENSGT00390000011705	ENSGT00940000159624	ENSGT00950000182859.A.a.b.b.c.a	ENSGT00940000155650.a.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b
Otomorpha	ANCESTRAL SPECIES	181	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00950000182934.b	ENSGT00940000156944.a.a	ENSGT00940000159345	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b.m	ENSGT00940000159538.g.b	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107
Clupeiformes	ANCESTRAL SPECIES	115	ENSGT00950000182934.b	ENSGT00940000156944.a.a	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b.m	ENSGT00940000159538.g.b	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000164917
Atlantic herring	MODERN SPECIES	24	pfdn1 (ENSCHAG00000015113)	slc23a1 (ENSCHAG00000012939)	fabp6 (ENSCHAG00000012886)	PWWP2A (ENSCHAG00000012878)	ttc1 (ENSCHAG00000012861)	ADRA1B (ENSCHAG00000012797)	havcr1 (ENSCHAG00000012784)	timd4 (ENSCHAG00000012771)	ENSCHAG00000012401	fam53c (ENSCHAG00000012371)	foxi3a (ENSCHAG00000012354)	grpel2 (ENSCHAG00000012344)	afap1l1b (ENSCHAG00000012303)	ablim3 (ENSCHAG00000010763)	adrb2b (ENSCHAG00000010726)	ubtd2 (ENSCHAG00000010707) #22	ENSCHAG00000009567	ublcp1 (ENSCHAG00000009533)	zgc:110540 (ENSCHAG00000009506)	ankhd1 (ENSCHAG00000007635)	eif4ebp3 (ENSCHAG00000007456)	mat2b (ENSCHAG00000007316)	zgc:165573 (ENSCHAG00000007303)	TENM2 (ENSCHAG00000001976)	nipal4 (ENSCHAG00000001747)	gria1b (ENSCHAG00000001190)	hnrnpabb (ENSCHAG00000000894)	ENSCHAG00000015877	ENSCHAG00000015870	ENSCHAG00000015014	ENSCHAG00000014994
Denticle herring	MODERN SPECIES	16	ENSDCDG00000032668	ENSDCDG00000032669	timd4 (ENSDCDG00000032670)	ENSDCDG00000032671	ENSDCDG00000032678	fam53c (ENSDCDG00000032849)	slbp2 (ENSDCDG00000032851)	zmat2 (ENSDCDG00000032855)	lcp2a (ENSDCDG00000032859)	foxi3a (ENSDCDG00000032861)	nhp2 (ENSDCDG00000032863)	grpel2 (ENSDCDG00000032864)	afap1l1b (ENSDCDG00000032866)	ablim3 (ENSDCDG00000032880)	adrb2b (ENSDCDG00000033033)	ubtd2 (ENSDCDG00000033035) #22	ENSDCDG00000033037	ublcp1 (ENSDCDG00000033040)	zgc:110540 (ENSDCDG00000033043)	ankhd1 (ENSDCDG00000033117)	mat2b (ENSDCDG00000013937)	zgc:165573 (ENSDCDG00000014000)	TENM2 (ENSDCDG00000014499)	nipal4 (ENSDCDG00000021407)	gria1b (ENSDCDG00000021440)	ENSDCDG00000022074	ENSDCDG00000022078	PAK3 (ENSDCDG00000022088)	ENSDCDG00000022119	her7 (ENSDCDG00000022120)	her7 (ENSDCDG00000022122)
Otophysi	DUPLICATION
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES	123														ENSGT00950000182850.a.b.a.b.b.m	ENSGT00940000159538.g.b	ENSGT00940000156641.k.a #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00530000063407.b	ENSGT00950000183061.a.a.a.a.a.a.a	ENSGT00940000158509	ENSGT00390000002110	ENSGT00620000088064	ENSGT00390000000080.a.b	ENSGT00410000025556.a.a.a.a	ENSGT00940000160017	ENSGT00390000003426	ENSGT00940000158544	ENSGT00950000183109.c.a.b	ENSGT00940000159431	ENSGT00940000163584.b.a.a
Characiphysae	ANCESTRAL SPECIES	60	ENSGT00390000007430	ENSGT00940000154783	ENSGT00390000012647	ENSGT00390000000360	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT01060000248589.C.h	ENSGT00940000158744	ENSGT00510000047092	ENSGT00530000063582.a	ENSGT00950000183018.a.d.b	ENSGT00940000156339	ENSGT00950000182850.a.b.a.b.b.m	ENSGT00940000159538.g.b	ENSGT00940000156641.k.a #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00530000063407.b	ENSGT00950000183061.a.a.a.a.a.a.a	ENSGT00940000158509	ENSGT00390000002110	ENSGT00620000088064	ENSGT00390000000080.a.b	ENSGT00410000025556.a.a.a.a	ENSGT00940000160017	ENSGT00390000003426	ENSGT00940000158544	ENSGT00950000183109.c.a.b	ENSGT00940000159431	ENSGT00940000163584.b.a.a
Channel catfish	MODERN SPECIES	9	cmc4 (ENSIPUG00000010593)	FUNDC1 (ENSIPUG00000010565)	brcc3 (ENSIPUG00000010538)	ENSIPUG00000010521	GABRA3 (ENSIPUG00000010510)	ENSIPUG00000010479	ENSIPUG00000010448	ENSIPUG00000010427	mpp1 (ENSIPUG00000010364)	dkc1 (ENSIPUG00000010309)	tmlhe (ENSIPUG00000010290)	NIPSNAP2 (ENSIPUG00000010266)	cct6a (ENSIPUG00000010208)	ABLIM3 (ENSIPUG00000010168)	adrb2b (ENSIPUG00000010148)	ubtd2 (ENSIPUG00000010146) #22	il12b (ENSIPUG00000010114)	ublcp1 (ENSIPUG00000009968)	ENSIPUG00000009948	plrdgb (ENSIPUG00000009808)	ENSIPUG00000009776	tmigd1 (ENSIPUG00000009744)	slc47a1 (ENSIPUG00000009665)	slc47a1 (ENSIPUG00000009645)	med31 (ENSIPUG00000009602)	SLC13A5 (ENSIPUG00000009531)	Serpinf2 (ENSIPUG00000009487)	SERPINF1 (ENSIPUG00000009470)	slco2b1 (ENSIPUG00000009338)	ENSIPUG00000009250	ENSIPUG00000009198
Characiphysae_b	ANCESTRAL SPECIES	6	ENSGT00390000007430	ENSGT00940000154783	ENSGT00390000012647	ENSGT00390000000360	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT01060000248589.C.h	ENSGT00940000158744	ENSGT00510000047092	ENSGT00530000063582.a	ENSGT00950000183018.a.d.b	ENSGT00940000156339	ENSGT00950000182850.a.b.a.b.b.m	ENSGT00940000159538.g.b	ENSGT00940000156641.k.a #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00530000063407.b	ENSGT00950000183061.a.a.a.a.a.a.a	ENSGT00940000158509	ENSGT00390000002110	ENSGT00620000088064	ENSGT00390000000080.a.b	ENSGT00410000025556.a.a.a.a	ENSGT00940000160017	ENSGT00390000003426	ENSGT00940000158544	ENSGT00950000183109.c.a.b	ENSGT00940000159431	ENSGT00940000163584.b.a.a
Electric eel	MODERN SPECIES	40	rbm22 (ENSEEEG00000019104)	ndst1b (ENSEEEG00000019115)	rps14 (ENSEEEG00000019195)	cd74b (ENSEEEG00000019197)	ENSEEEG00000019199	ENSEEEG00000019202	pomp (ENSEEEG00000019207)	ccdc82 (ENSEEEG00000019220)	ENSEEEG00000019221	ARX (ENSEEEG00000019222)	TMLHE (ENSEEEG00000019227)	NIPSNAP2 (ENSEEEG00000019233)	cct6a (ENSEEEG00000019256)	ABLIM3 (ENSEEEG00000019270)	adrb2b (ENSEEEG00000019275)	ubtd2 (ENSEEEG00000019276) #22	ENSEEEG00000019278	ublcp1 (ENSEEEG00000019281)	rars1 (ENSEEEG00000019288)	ENSEEEG00000019295	sgcd (ENSEEEG00000019299)	ENSEEEG00000019300	mrpl22 (ENSEEEG00000019302)	GEMIN5 (ENSEEEG00000019305)	cnot8 (ENSEEEG00000019307)	WWC1 (ENSEEEG00000019308)	ARL10 (ENSEEEG00000019309)	nop16 (ENSEEEG00000019310)	GRK6 (ENSEEEG00000019333)	ENSEEEG00000020837	DBN1 (ENSEEEG00000020838)
Characoidei	ANCESTRAL SPECIES	17	ENSGT00390000007430	ENSGT00940000154783	ENSGT00390000012647	ENSGT00390000000360	ENSGT00940000159444	ENSGT00940000164188	ENSGT00940000160507	ENSGT01060000248589.C.h	ENSGT00940000158744	ENSGT00510000047092	ENSGT00530000063582.a	ENSGT00950000183018.a.d.b	ENSGT00940000156339	ENSGT00950000182850.a.b.a.b.b.m	ENSGT00940000159538.g.b	ENSGT00940000156641.k.a #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00530000063407.b	ENSGT00950000183061.a.a.a.a.a.a.a	ENSGT00940000158509	ENSGT00390000002110	ENSGT00620000088064	ENSGT00390000000080.a.b	ENSGT00410000025556.a.a.a.a	ENSGT00940000160017	ENSGT00390000003426	ENSGT00940000158544	ENSGT00950000183109.c.a.b	ENSGT00940000159431	ENSGT00940000163584.b.a.a
Red-bellied piranha	MODERN SPECIES	107	prdm8b (ENSPNAG00000019414)	antxr2a (ENSPNAG00000019395)	paqr3a (ENSPNAG00000019318)	bmp2k (ENSPNAG00000019284)	fras1 (ENSPNAG00000019185)	mrpl1 (ENSPNAG00000018662)	cnot6l (ENSPNAG00000003537)	ENSPNAG00000018545	ENSPNAG00000006131	ENSPNAG00000018507	cxcl11.1 (ENSPNAG00000006645)	NIPSNAP2 (ENSPNAG00000018459)	cct6a (ENSPNAG00000018405)	ABLIM3 (ENSPNAG00000018341)	adrb2b (ENSPNAG00000018285)	ubtd2 (ENSPNAG00000018276) #22	ENSPNAG00000003516	ublcp1 (ENSPNAG00000018236)	rars1 (ENSPNAG00000018183)	ENSPNAG00000018112	sgcd (ENSPNAG00000018054)	ENSPNAG00000018026	ENSPNAG00000018016	rps6 (ENSPNAG00000017985)	ENSPNAG00000017960	dnaja1 (ENSPNAG00000017951)	patl1 (ENSPNAG00000017907)	ENSPNAG00000017895	ENSPNAG00000017874	ENSPNAG00000017734
Mexicana tetra	MODERN SPECIES	5	fundc2 (ENSAMXG00000043151)	cmc4 (ENSAMXG00000042179)	BRCC3 (ENSAMXG00000036716)	GABRA3 (ENSAMXG00000020340)	ENSAMXG00000017014	ENSAMXG00000032194	ENSAMXG00000017046	ENSAMXG00000025829	MPP1 (ENSAMXG00000034396)	dkc1 (ENSAMXG00000017108)	TMLHE (ENSAMXG00000029827)	ENSAMXG00000041512	cct6a (ENSAMXG00000017185)	ABLIM3 (ENSAMXG00000017208)	adrb2b (ENSAMXG00000025830)	ubtd2 (ENSAMXG00000017243) #22	ENSAMXG00000017264	ublcp1 (ENSAMXG00000017277)	rars1 (ENSAMXG00000017290)	ENSAMXG00000017310	sgcd (ENSAMXG00000006747)	ENSAMXG00000042573	ENSAMXG00000036186	mrpl22 (ENSAMXG00000006753)	GEMIN5 (ENSAMXG00000006771)	cnot8 (ENSAMXG00000041098)	WWC1 (ENSAMXG00000006817)	ENSAMXG00000036791	nop16 (ENSAMXG00000006843)	GRK6 (ENSAMXG00000006854)	ENSAMXG00000039122
Cyprinoidei	ANCESTRAL SPECIES	94															ENSGT00940000159538.g.b	ENSGT00940000156641.k.a #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00530000063407.b	ENSGT00950000183061.a.a.a.a.a.a.a	ENSGT00940000158509	ENSGT00390000002110	ENSGT00620000088064	ENSGT00390000000080.a.b	ENSGT00410000025556.a.a.a.a	ENSGT00940000160017	ENSGT00390000003426	ENSGT00940000158544	ENSGT00950000183109.c.a.b	ENSGT00940000159431	ENSGT00940000163584.b.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	1409																ENSGT00940000156641.k.a.a #22	ENSGT00390000012630.A.a.c
Cyprininae_a	ANCESTRAL SPECIES	1066																ENSGT00940000156641.k.a.a #22	ENSGT00390000012630.A.a.c
Golden-line barbel	MODERN SPECIES	106	ENSSGRG00000045625	ENSSGRG00000045621	ENSSGRG00000045619	ENSSGRG00000045618	ENSSGRG00000045617	or70a4 (ENSSGRG00000045604)	slco2b1 (ENSSGRG00000045577)	ENSSGRG00000045571	slc13a5a (ENSSGRG00000045570)	med31 (ENSSGRG00000045567)	txnrd3 (ENSSGRG00000045564)	tmigd1 (ENSSGRG00000045563)	ENSSGRG00000045562	ENSSGRG00000045560	kif4 (ENSSGRG00000044970)	ubtd2 (ENSSGRG00000044966) #22	ENSSGRG00000044965
Common carp reference	MODERN SPECIES	45	ENSCCRG00000080091	serpinf1 (ENSCCRG00000027902)	ENSCCRG00000039421	slc13a5a (ENSCCRG00000039433)	med31 (ENSCCRG00000053041)	slc47a2.1 (ENSCCRG00000022901)	ENSCCRG00000056554	slc47a1 (ENSCCRG00000035022)	tmigd1 (ENSCCRG00000046415)	ENSCCRG00000002141	ENSCCRG00000056228	ENSCCRG00000057960	ENSCCRG00000043426	ENSCCRG00000068410	ENSCCRG00000041286	ubtd2 (ENSCCRG00000067158) #22	ENSCCRG00000057253	ENSCCRG00000063596	ENSCCRG00000064553	rars1 (ENSCCRG00000057371)	ENSCCRG00000006801	ENSCCRG00000058722	sgcd (ENSCCRG00000079985)	ENSCCRG00000078695	ENSCCRG00000034910	ENSCCRG00000068831	ENSCCRG00000067026	ENSCCRG00000059788	ENSCCRG00000054532	ENSCCRG00000069887	ENSCCRG00000078443
Cyprininae	ANCESTRAL SPECIES	1148																ENSGT00940000156641.k.a.b #22	ENSGT00390000012630.A.a.d	ENSGT00390000010107.q.b
Goldfish	MODERN SPECIES	19	klhl18 (ENSCARG00000042181)	bfsp2 (ENSCARG00000042105)	zgc:136930 (ENSCARG00000042043)	ccr9a (ENSCARG00000042032)	PRPF4B (ENSCARG00000041580)	ENSCARG00000041545	ENSCARG00000041513	tmem53 (ENSCARG00000041383)	rnf220a (ENSCARG00000040957)	klf17 (ENSCARG00000040900)	slc6a9 (ENSCARG00000040309)	ENSCARG00000040243	ENSCARG00000040226	ENSCARG00000040224	ENSCARG00000040219	ubtd2 (ENSCARG00000040202) #22	ENSCARG00000040165	UBLCP1 (ENSCARG00000040141)	ENSCARG00000040132	ENSCARG00000040125	ENSCARG00000040119	cryz (ENSCARG00000040106)	ENSCARG00000040094	fam151a (ENSCARG00000040012)	fam151a (ENSCARG00000039966)	acot11a (ENSCARG00000039746)	ssbp3a (ENSCARG00000038776)	mrpl37 (ENSCARG00000038712)	CDCP2 (ENSCARG00000038697)	tceanc2 (ENSCARG00000038688)	cdc7 (ENSCARG00000038522)
Cyprininae_a	ANCESTRAL SPECIES	846																ENSGT00940000156641.k.a.b #22	ENSGT00390000012630.A.a.d	ENSGT00390000010107.q.b
Golden-line barbel	MODERN SPECIES	1495															ENSSGRG00000014896	ubtd2 (ENSSGRG00000014897) #22	ENSSGRG00000014898	UBLCP1 (ENSSGRG00000014904)
Common carp reference	MODERN SPECIES	38	ENSCCRG00000065202	ENSCCRG00000030289	coro6 (ENSCCRG00000031806)	ssh2b (ENSCCRG00000031795)	nsrp1 (ENSCCRG00000041578)	nup98 (ENSCCRG00000056949)	ENSCCRG00000027239	ENSCCRG00000067003	ENSCCRG00000061766	ENSCCRG00000061949	ENSCCRG00000080690	ENSCCRG00000055577	ENSCCRG00000067070	ENSCCRG00000072957	ENSCCRG00000026737	ENSCCRG00000072832 #22	ENSCCRG00000004312	ENSCCRG00000060971	cnot8 (ENSCCRG00000013807)	ENSCCRG00000048791	ENSCCRG00000048785	ENSCCRG00000048783	GRK6 (ENSCCRG00000079918)	ENSCCRG00000076857	DBN1 (ENSCCRG00000039424)	zgc:77151 (ENSCCRG00000016088)	ENSCCRG00000024925	ENSCCRG00000075998	znf346 (ENSCCRG00000076424)	fgfr4 (ENSCCRG00000062769)	NSD1 (ENSCCRG00000015941)
Zebrafish	MODERN SPECIES	13	hmgb3b (ENSDARG00000006408)	TRPC5 (ENSDARG00000060837)	alg13 (ENSDARG00000054374)	dacha (ENSDARG00000010132)	chm (ENSDARG00000003845)	wdr55 (ENSDARG00000007217)	zgc:56585 (ENSDARG00000026236)	cdc23 (ENSDARG00000044484)	kif20a (ENSDARG00000044491)	ENSDARG00000094753	lipia (ENSDARG00000007108)	ENSDARG00000090202	ENSDARG00000079393	poglut3 (ENSDARG00000021408)	adrb2b (ENSDARG00000054510)	ubtd2 (ENSDARG00000069184) #22	ENSDARG00000054542	ublcp1 (ENSDARG00000044492)	rars1 (ENSDARG00000054530)	ENSDARG00000074819	sgcd (ENSDARG00000098573)	GEMIN5 (ENSDARG00000079257)	mrpl22 (ENSDARG00000109961)	cnot8 (ENSDARG00000020043)	WWC1 (ENSDARG00000076041)	ENSDARG00000117130	nop16 (ENSDARG00000044402)	GRK6 (ENSDARG00000032157)	ENSDARG00000089800	ENSDARG00000069113	zgc:77151 (ENSDARG00000054307)
Otophysi	ANCESTRAL SPECIES	22	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000179769	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00390000009693	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.n	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000156641.k.b #22	ENSGT00390000007501 #23	ENSGT00390000012630.A.b
Characiphysae	ANCESTRAL SPECIES	7	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000179769	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00390000009693	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.n	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000156641.k.b #22	ENSGT00390000007501 #23	ENSGT00390000012630.A.b	ENSGT00950000182859.A.a.b.b.d.b	ENSGT00940000155650.a.a	ENSGT00390000012944	ENSGT00940000161486	ENSGT00940000166023	ENSGT00940000153304.A	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00940000153737.a	ENSGT00940000158987	ENSGT00940000165729	ENSGT00390000003231.a
Characiphysae_b	ANCESTRAL SPECIES	7	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000179769	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00390000009693	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.n	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000156641.k.b #22	ENSGT00390000007501 #23	ENSGT00390000012630.A.b
Electric eel	MODERN SPECIES	550			SEMA6B (ENSEEEG00000002799)	ENSEEEG00000002798	ENSEEEG00000002797	WNT8A (ENSEEEG00000002796)	ENSEEEG00000002721	zgc:194246 (ENSEEEG00000002712)	foxi3b (ENSEEEG00000002710)	ENSEEEG00000002708	pttg1 (ENSEEEG00000002706)	afap1l1a (ENSEEEG00000002697)	ablim3 (ENSEEEG00000002692)	SH3TC2 (ENSEEEG00000002619)	adrb2a (ENSEEEG00000002610)	UBTD2 (ENSEEEG00000002601) #22	ENSEEEG00000002597 #23	ENSEEEG00000002591
Characoidei	ANCESTRAL SPECIES	2	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000179769	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00390000009693	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.n	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000156641.k.b #22	ENSGT00390000012630.A.b	ENSGT00940000166658.a	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.b	ENSGT00940000155650.a.a	ENSGT00390000012944	ENSGT00940000161486	ENSGT00940000166023	ENSGT00940000153304.A	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00940000153737.a	ENSGT00940000158987	ENSGT00940000165729
Red-bellied piranha	MODERN SPECIES	56	ENSPNAG00000020292	gria1a (ENSPNAG00000020218)	ENSPNAG00000020157	ENSPNAG00000020146	WNT8A (ENSPNAG00000020116)	ENSPNAG00000020109	ENSPNAG00000020065	zgc:194246 (ENSPNAG00000020055)	foxi3b (ENSPNAG00000020052)	ENSPNAG00000020045	pttg1 (ENSPNAG00000020030)	afap1l1a (ENSPNAG00000020021)	ablim3 (ENSPNAG00000019976)	SH3TC2 (ENSPNAG00000006468)	adrb2a (ENSPNAG00000019838)	UBTD2 (ENSPNAG00000019833) #22	il12ba (ENSPNAG00000005879)	RNF145 (ENSPNAG00000019400)	ebf3a (ENSPNAG00000019350)	clint1a (ENSPNAG00000019182)	LSM11 (ENSPNAG00000019128)	ZBTB3 (ENSPNAG00000019119)	rnaseh2c (ENSPNAG00000019111)	trmt12 (ENSPNAG00000019028)	sytl4 (ENSPNAG00000005144)	SRPX2 (ENSPNAG00000019001)	tspan7 (ENSPNAG00000018991)	ENSPNAG00000018925	cstf2 (ENSPNAG00000018887)	nox1 (ENSPNAG00000018857)	xkrx (ENSPNAG00000018809)
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000156641.l #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000156641.l #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000156641.l #22
Goldfish	MODERN SPECIES	2205																UBTD2 (ENSCARG00000037203) #22
Euteleosteomorpha	ANCESTRAL SPECIES	25	ENSGT00940000157061.b	ENSGT00530000063371.C.b	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k	ENSGT00940000161176	ENSGT00940000164576.b.b	ENSGT00940000156835.l.b	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00940000159538.g.b	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.a.b	ENSGT00390000011206.b	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a #10	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880
Protacanthopterygii	ANCESTRAL SPECIES	44						ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.l.b	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00940000159538.g.b	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.c.a	ENSGT00940000155650.a.b.c	ENSGT00940000161042	ENSGT00940000157770	ENSGT00950000182864.a.b.b.a.b.a.b.a	ENSGT00390000011206.b	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a.w #10	ENSGT00940000154998.a.a.x #10
Northern pike	MODERN SPECIES	6	havcr1 (ENSELUG00000032372)	timd4 (ENSELUG00000021681)	ENSELUG00000028611	ENSELUG00000021690	ENSELUG00000021723	fam53c (ENSELUG00000021751)	slbp2 (ENSELUG00000021799)	zmat2 (ENSELUG00000021857)	ENSELUG00000021946	foxi3a (ENSELUG00000021971)	nhp2 (ENSELUG00000021981)	grpel2 (ENSELUG00000022001)	afap1l1b (ENSELUG00000022026)	ablim3 (ENSELUG00000022091)	adrb2b (ENSELUG00000022105)	ubtd2 (ENSELUG00000022138) #22	IL12B (ENSELUG00000022176)	ublcp1 (ENSELUG00000022212)	rnf145b (ENSELUG00000022258)	EBF1 (ENSELUG00000022383)	CLINT1 (ENSELUG00000022458)	ENSELUG00000022471	TCERG1 (ENSELUG00000022544)	PPP2R2B (ENSELUG00000022606)	PCYOX1L (ENSELUG00000022655)	ATP6V0E1 (ENSELUG00000025753) #16	CREBRF (ENSELUG00000022756) #15	BNIP1 (ENSELUG00000028774) #14	STC2 (ENSELUG00000029462) #12	bod1 (ENSELUG00000022818)	CPEB4 (ENSELUG00000033579) #10
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	584						ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000164705.e	ENSGT00940000156835.l.b.a	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a #22	ENSGT00390000012630.A.a.a	ENSGT00390000010107.u	ENSGT00940000157281.u	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.b	ENSGT00950000182859.A.a.a.a.e
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00940000156944.a.a.h	ENSGT00940000159345	ENSGT00940000163509.a.a.a.q.b	ENSGT00940000163509.b.h	ENSGT00940000165075.a.b.a.b	ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000164705.e	ENSGT00940000156835.l.b.a	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a #22	ENSGT00390000012630.A.a.a	ENSGT00390000010107.u	ENSGT00940000157281.u	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.b	ENSGT00950000182859.A.a.a.a.e	ENSGT00950000182859.A.a.b.b.c.a.a	ENSGT00940000155650.a.b.c.a	ENSGT00940000161042	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00990000214210	ENSGT00390000007125.b.b #15	ENSGT00390000014412.k.b #14	ENSGT00390000005989.a.b.a.b.b #12
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00940000157213.m	ENSGT00940000156944.a.a.h	ENSGT00940000159345	ENSGT00940000163509.a.a.a.q.b	ENSGT00940000163509.b.h	ENSGT00940000165075.a.b.a.b	ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000156835.l.b.a	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a #22	ENSGT00390000012630.A.a.a	ENSGT00390000010107.u	ENSGT00940000157281.u	ENSGT00950000182859.A.a.b.b.c.a.a	ENSGT00940000155650.a.b.c.a	ENSGT00940000161042.d	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00990000214210	ENSGT00390000007125.b.b #15	ENSGT00390000014412.k.b #14	ENSGT00390000005989.a.b.a.b.b #12	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x #10
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00940000157692.s	ENSGT00940000157213.m	ENSGT00940000156944.a.a.h	ENSGT00940000159345	ENSGT00940000163509.a.a.a.q.b	ENSGT00940000163509.b.h	ENSGT00940000165075.a.b.a.b	ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a #22	ENSGT00390000012630.A.a.a	ENSGT00390000010107.u	ENSGT00940000157281.u	ENSGT00950000182859.A.a.b.b.c.a.a	ENSGT00940000155650.a.b.c.a	ENSGT00940000161042.d	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00390000007125.b.b #15	ENSGT00390000014412.k.b #14	ENSGT00390000005989.a.b.a.b.b #12	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x #10	ENSGT00390000000483.a.a.c
Coho salmon	MODERN SPECIES	26	fabp6 (ENSOKIG00005002935)	PWWP2A (ENSOKIG00005002931)	ttc1 (ENSOKIG00005002924)	ADRA1B (ENSOKIG00005002911)	ENSOKIG00005002899	ENSOKIG00005002891	timd4 (ENSOKIG00005002884)	ENSOKIG00005002877	ENSOKIG00005002826	ENSOKIG00005002814	foxi3a (ENSOKIG00005002795)	ENSOKIG00005002782	afap1l1b (ENSOKIG00005002733)	ABLIM3 (ENSOKIG00005002317)	adrb2b (ENSOKIG00005002209)	ubtd2 (ENSOKIG00005002179) #22	IL12B (ENSOKIG00005002154)	UBLCP1 (ENSOKIG00005002126)	RNF145 (ENSOKIG00005002040)	EBF1 (ENSOKIG00005001939)	CLINT1 (ENSOKIG00005001894)	ENSOKIG00005001865	TCERG1 (ENSOKIG00005001795)	ENSOKIG00005001711	PCYOX1L (ENSOKIG00005001695)	CREBRF (ENSOKIG00005001682) #15	BNIP1 (ENSOKIG00005050293) #14	STC2 (ENSOKIG00005050291) #12	bod1 (ENSOKIG00005050285)	CPEB4 (ENSOKIG00005050275) #10	nsg2 (ENSOKIG00005050268)
Chinook salmon	MODERN SPECIES	33	ADRA1B (ENSOTSG00005007743)	ENSOTSG00005007741	ENSOTSG00005007740	havcr1 (ENSOTSG00005007738)	timd4 (ENSOTSG00005007736)	ENSOTSG00005007735	ENSOTSG00005007480	fam53c (ENSOTSG00005007473)	foxi3a (ENSOTSG00005007472)	nhp2 (ENSOTSG00005007470)	grpel2 (ENSOTSG00005007469)	ENSOTSG00005007466	afap1l1b (ENSOTSG00005007463)	ablim3 (ENSOTSG00005006050)	adrb2b (ENSOTSG00005006040)	ubtd2 (ENSOTSG00005006038) #22	IL12B (ENSOTSG00005006037)	UBLCP1 (ENSOTSG00005006034)	RNF145 (ENSOTSG00005005977)	EBF1 (ENSOTSG00005005972)	CLINT1 (ENSOTSG00005005969)	ENSOTSG00005005967	TCERG1 (ENSOTSG00005005804)	ENSOTSG00005005782	PCYOX1L (ENSOTSG00005005777)	ENSOTSG00005005747	CREBRF (ENSOTSG00005005738) #15	BNIP1 (ENSOTSG00005005730) #14	STC2 (ENSOTSG00005047595) #12	bod1 (ENSOTSG00005047594)	CPEB4 (ENSOTSG00005047591) #10
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000017713	timd4 (ENSOMYG00000017656)	havcr1 (ENSOMYG00000017688)	ENSOMYG00000052705	ENSOMYG00000017514	ENSOMYG00000017464	ENSOMYG00000017430	foxi3a (ENSOMYG00000017410)	ENSOMYG00000017396	nhp2 (ENSOMYG00000075157)	ENSOMYG00000071550	grpel2 (ENSOMYG00000017377)	afap1l1b (ENSOMYG00000017287)	ABLIM3 (ENSOMYG00000017213)	adrb2b (ENSOMYG00000017194)	ubtd2 (ENSOMYG00000017184) #22	ENSOMYG00000049547	il-12B2 (ENSOMYG00000017163)	UBLCP1 (ENSOMYG00000017128)	RNF145 (ENSOMYG00000017078)	ENSOMYG00000053188	EBF1 (ENSOMYG00000016373)	CLINT1 (ENSOMYG00000016310)	ENSOMYG00000016303	ENSOMYG00000016176	ENSOMYG00000016167	ENSOMYG00000016147	ENSOMYG00000016135	CREBRF (ENSOMYG00000016119) #15	sec20 (ENSOMYG00000016108) #14	STC2 (ENSOMYG00000016097) #12
Salmo	ANCESTRAL SPECIES	44	ENSGT00940000156944.a.a.h	ENSGT00940000159345	ENSGT00940000163509.a.a.a.q.b	ENSGT00940000163509.b.h	ENSGT00940000165075.a.b.a.b	ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000164705.e	ENSGT00940000156835.l.b.a	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a #22	ENSGT00390000012630.A.a.a	ENSGT00390000010107.u	ENSGT00940000157281.u	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.b	ENSGT00950000182859.A.a.a.a.e	ENSGT00950000182859.A.a.b.b.c.a.a	ENSGT00940000155650.a.b.c.a	ENSGT00940000161042	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00990000214210	ENSGT00390000007125.b.b #15	ENSGT00390000014412.k.b #14	ENSGT00390000005989.a.b.a.b.b #12
Atlantic salmon	MODERN SPECIES	4	ADRA1B (ENSSSAG00000069371)	ENSSSAG00000069377	havcr1 (ENSSSAG00000069384)	havcr1 (ENSSSAG00000120312)	timd4 (ENSSSAG00000116308)	ENSSSAG00000069406	ctbp2 (ENSSSAG00000069412)	fam53c (ENSSSAG00000095597)	ENSSSAG00000069491	lcp2 (ENSSSAG00000069494)	foxi3a (ENSSSAG00000090123)	nola2 (ENSSSAG00000069506)	afap1l1b (ENSSSAG00000069515)	ABLIM3 (ENSSSAG00000069535)	adrb2b (ENSSSAG00000100403)	ubtd2 (ENSSSAG00000069624) #22	IL12p40b2 (ENSSSAG00000069633)	UBLCP1 (ENSSSAG00000069642)	RNF145 (ENSSSAG00000069680)	ebf1 (ENSSSAG00000070298)	CLINT1 (ENSSSAG00000072862)	ENSSSAG00000072867	ENSSSAG00000072917	ENSSSAG00000073861	ENSSSAG00000103687	ENSSSAG00000086568	ENSSSAG00000073883	CREBRF (ENSSSAG00000073887) #15	BNIP1 (ENSSSAG00000108295) #14	STC2 (ENSSSAG00000073897) #12	fa44b (ENSSSAG00000073900)
River trout	MODERN SPECIES	6	ENSSTUG00000011032	havcr1 (ENSSTUG00000011041)	timd4 (ENSSTUG00000011064)	ENSSTUG00000011068	ENSSTUG00000011077	ENSSTUG00000011088	fam53c (ENSSTUG00000011224)	slbp2 (ENSSTUG00000011232)	ENSSTUG00000011244	foxi3a (ENSSTUG00000011289)	nhp2 (ENSSTUG00000011301)	grpel2 (ENSSTUG00000011320)	afap1l1b (ENSSTUG00000011335)	ablim3 (ENSSTUG00000011402)	adrb2b (ENSSTUG00000011494)	ubtd2 (ENSSTUG00000011499) #22	ENSSTUG00000011515	IL12B (ENSSTUG00000011518)	UBLCP1 (ENSSTUG00000011536)	RNF145 (ENSSTUG00000011631)	EBF1 (ENSSTUG00000011739)	ENSSTUG00000011744	CLINT1 (ENSSTUG00000011752)	ENSSTUG00000011800	TCERG1 (ENSSTUG00000011818)	ENSSTUG00000012111	PCYOX1L (ENSSTUG00000012245)	ENSSTUG00000012264	CREBRF (ENSSTUG00000012271) #15	BNIP1 (ENSSTUG00000012299) #14	STC2 (ENSSTUG00000012322) #12
Huchen	MODERN SPECIES	2845															ENSHHUG00000020440	ubtd2 (ENSHHUG00000020422) #22	IL12B (ENSHHUG00000020409)	UBLCP1 (ENSHHUG00000020386)	RNF145 (ENSHHUG00000020354)	EBF1 (ENSHHUG00000020350)
Salmoninae	ANCESTRAL SPECIES	39	ENSGT00940000163509.a.a.a.q.a	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b #22	ENSGT00390000012630.A.a.b	ENSGT00390000010107.v	ENSGT00940000157281.v	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.a	ENSGT00940000155650.a.b.c.b	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b #16	ENSGT00390000007125.b.a #15	ENSGT00390000014412.k.a #14	ENSGT00390000005989.a.b.a.b.a #12	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w #10	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00940000163509.a.a.a.q.a	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b #22	ENSGT00390000012630.A.a.b	ENSGT00390000010107.v	ENSGT00940000157281.v	ENSGT00950000182859.A.a.b.b.c.a.b	ENSGT00940000155650.a.b.c.b	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b #16	ENSGT00390000007125.b.a #15	ENSGT00390000014412.k.a #14	ENSGT00390000005989.a.b.a.b.a #12	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w #10	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a
Salmo	ANCESTRAL SPECIES	17	ENSGT00940000163509.a.a.a.q.a	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b #22	ENSGT00390000012630.A.a.b	ENSGT00390000010107.v	ENSGT00940000157281.v	ENSGT00950000182859.A.a.b.b.c.a.b	ENSGT00940000155650.a.b.c.b	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b #16	ENSGT00390000007125.b.a #15	ENSGT00390000014412.k.a #14	ENSGT00390000005989.a.b.a.b.a #12	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w #10	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a
River trout	MODERN SPECIES	10	ENSSTUG00000036228	timd4 (ENSSTUG00000036245)	ENSSTUG00000036253	ENSSTUG00000036268	ENSSTUG00000036388	fam53c (ENSSTUG00000036624)	slbp2 (ENSSTUG00000002198)	zmat2 (ENSSTUG00000002672)	ENSSTUG00000002942	foxi3a (ENSSTUG00000003014)	nhp2 (ENSSTUG00000003023)	grpel2 (ENSSTUG00000003032)	afap1l1b (ENSSTUG00000003044)	ablim3 (ENSSTUG00000003154)	adrb2b (ENSSTUG00000004048)	ubtd2 (ENSSTUG00000004054) #22	IL12B (ENSSTUG00000004099)	UBLCP1 (ENSSTUG00000004208)	RNF145 (ENSSTUG00000004290)	CLINT1 (ENSSTUG00000004381)	TCERG1 (ENSSTUG00000004428)	ENSSTUG00000004656	ENSSTUG00000004825	ATP6V0E1 (ENSSTUG00000004829) #16	CREBRF (ENSSTUG00000004839) #15	BNIP1 (ENSSTUG00000004871) #14	STC2 (ENSSTUG00000004904) #12	bod1 (ENSSTUG00000004914)	CPEB4 (ENSSTUG00000004949) #10	nsg2 (ENSSTUG00000005361)	msx2b (ENSSTUG00000005380)
Atlantic salmon	MODERN SPECIES	23	havcr1 (ENSSSAG00000080172)	timd4 (ENSSSAG00000087400)	ENSSSAG00000080169	ENSSSAG00000080159	ENSSSAG00000089832	fam53c (ENSSSAG00000079951)	slbp2 (ENSSSAG00000079947)	zmat2 (ENSSSAG00000079943)	LCP2 (ENSSSAG00000079937)	foxi3a (ENSSSAG00000092072)	nhp2 (ENSSSAG00000098655)	grpel2 (ENSSSAG00000079928)	afap1l1b (ENSSSAG00000079915)	ABLIM3 (ENSSSAG00000079852)	adrb2b (ENSSSAG00000110588)	ubtd2 (ENSSSAG00000096167) #22	IL12B (ENSSSAG00000079839)	UBLCP1 (ENSSSAG00000079817)	RNF145 (ENSSSAG00000079811)	EBF1 (ENSSSAG00000079780)	CLINT1 (ENSSSAG00000079767)	ENSSSAG00000079669	ENSSSAG00000106518	ATP6V0E1 (ENSSSAG00000115307) #16	CREBRF (ENSSSAG00000079350) #15	BNIP1 (ENSSSAG00000079340) #14	STC2 (ENSSSAG00000079338) #12	FA44B (ENSSSAG00000079334)	CPEB4 (ENSSSAG00000079086) #10	nsg2 (ENSSSAG00000117002)	msx2b (ENSSSAG00000117200)
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00990000211609.b.b	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b #22	ENSGT00390000012630.A.a.b	ENSGT00390000010107.v	ENSGT00940000157281.v	ENSGT00950000182859.A.a.b.b.c.a.b	ENSGT00950000182859.A.a.b.b.c.b	ENSGT00950000182859.A.a.a.a.e	ENSGT00940000155650.a.b.c.b	ENSGT00940000161042.c	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b #16	ENSGT00390000007125.b.a #15	ENSGT00390000014412.k.a #14	ENSGT00390000005989.a.b.a.b.a #12	ENSGT00940000156198.c.b.d
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000017961	ENSOMYG00000049711	ENSOMYG00000056702	ENSOMYG00000017991	ENSOMYG00000018078	ENSOMYG00000018199	zmat2 (ENSOMYG00000018246)	slbp2 (ENSOMYG00000018216)	ENSOMYG00000018338	foxi3a (ENSOMYG00000018364)	nhp2 (ENSOMYG00000018371)	grpel2 (ENSOMYG00000018397)	afap1l1b (ENSOMYG00000018410)	ABLIM3 (ENSOMYG00000065012)	adrb2b (ENSOMYG00000012647)	ubtd2 (ENSOMYG00000064167) #22	ENSOMYG00000068494	IL12B (ENSOMYG00000017650)	UBLCP1 (ENSOMYG00000017671)	RNF145 (ENSOMYG00000017690)	EBF1 (ENSOMYG00000075841)	ENSOMYG00000075590	ENSOMYG00000068243	CLINT1 (ENSOMYG00000069962)	ENSOMYG00000030826	ENSOMYG00000031043	ATP6V0E1 (ENSOMYG00000052848) #16	CREBRF (ENSOMYG00000031280) #15	BNIP1 (ENSOMYG00000031293) #14	STC2 (ENSOMYG00000031300) #12	ENSOMYG00000071622
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT00940000165075.a.b.a.a	ENSGT00990000211609.b.b	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.a.b.g.b.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b #22	ENSGT00390000012630.A.a.b	ENSGT00390000010107.v	ENSGT00940000157281.v	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.a	ENSGT00950000182859.A.a.b.b.c.b	ENSGT00950000182859.A.a.a.a.e	ENSGT00940000155650.a.b.c.b	ENSGT00940000161042.c	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b #16	ENSGT00390000007125.b.a #15	ENSGT00390000014412.k.a #14	ENSGT00390000005989.a.b.a.b.a #12	ENSGT00940000156198.c.b.d
Coho salmon	MODERN SPECIES	20	ENSOKIG00005038054	ENSOKIG00005037894	ENSOKIG00005037784	fam53c (ENSOKIG00005037756)	slbp2 (ENSOKIG00005037748)	zmat2 (ENSOKIG00005037681)	ENSOKIG00005037642	ENSOKIG00005037572	foxi3a (ENSOKIG00005037555)	nhp2 (ENSOKIG00005037534)	grpel2 (ENSOKIG00005037510)	afap1l1b (ENSOKIG00005037475)	ENSOKIG00005037461	ABLIM3 (ENSOKIG00005037308)	adrb2b (ENSOKIG00005037279)	ubtd2 (ENSOKIG00005037269) #22	ENSOKIG00005037259	ENSOKIG00005037227	UBLCP1 (ENSOKIG00005037194)	RNF145 (ENSOKIG00005037114)	ENSOKIG00005037103	EBF1 (ENSOKIG00005037089)	EBF1 (ENSOKIG00005037083)	ENSOKIG00005037071	CLINT1 (ENSOKIG00005037005)	TCERG1 (ENSOKIG00005036688)	DLX6 (ENSOKIG00005036642)	ENSOKIG00005036438	ATP6V0E1 (ENSOKIG00005036389) #16	CREBRF (ENSOKIG00005036368) #15	BNIP1 (ENSOKIG00005036339) #14
Chinook salmon	MODERN SPECIES	23	GABRB2 (ENSOTSG00005007421)	GABRA6 (ENSOTSG00005007420)	gabra1 (ENSOTSG00005007419)	GABRG2 (ENSOTSG00005007418)	ENSOTSG00005007417	septin8a (ENSOTSG00005005081)	SOWAHA (ENSOTSG00005005073)	ENSOTSG00005005072	AFF4 (ENSOTSG00005005070)	zcchc10 (ENSOTSG00005005069)	hspa4a (ENSOTSG00005004283)	ENSOTSG00005004266	endou2 (ENSOTSG00005004263)	NDFIP1 (ENSOTSG00005004020)	adrb2b (ENSOTSG00005004018)	ubtd2 (ENSOTSG00005004017) #22	ENSOTSG00005004014	UBLCP1 (ENSOTSG00005004012)	RNF145 (ENSOTSG00005003879)	ENSOTSG00005003874	spry4 (ENSOTSG00005003872)	fgf1b (ENSOTSG00005003871)	ARHGAP26 (ENSOTSG00005003868)	NR3C1 (ENSOTSG00005003629)	yipf5 (ENSOTSG00005003618)	kctd16b (ENSOTSG00005003616)	GRXCR2 (ENSOTSG00005003615)	ENSOTSG00005003614	ENSOTSG00005003611	RBM27 (ENSOTSG00005003606)	pou4f3 (ENSOTSG00005003603)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000156641.n #22
Huchen	MODERN SPECIES	4837																ENSHHUG00000010975 #22
Acanthomorphata	ANCESTRAL SPECIES	10	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00940000155650.a.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Cod	MODERN SPECIES	20	ENSGMOG00000010840	ENSGMOG00000034818	ENSGMOG00000030070	ENSGMOG00000036016	ENSGMOG00000010874	ENSGMOG00000010941	znrd2 (ENSGMOG00000033688)	arr3a (ENSGMOG00000010969)	MCF2 (ENSGMOG00000010978)	f9b (ENSGMOG00000022348)	fgf13b (ENSGMOG00000011012)	ENSGMOG00000011023	ENSGMOG00000011042	ENSGMOG00000011065	ENSGMOG00000032640	ubtd2 (ENSGMOG00000023849) #22	ENSGMOG00000011082	ublcp1 (ENSGMOG00000011094)	RNF145 (ENSGMOG00000011104)	ENSGMOG00000023755	ENSGMOG00000036187	ENSGMOG00000016505	ENSGMOG00000016493	CREBRF (ENSGMOG00000025090) #15	ENSGMOG00000016467 #14	STC2 (ENSGMOG00000024586) #12	bod1 (ENSGMOG00000016460)	ENSGMOG00000016444	tpst1l (ENSGMOG00000012504)	ENSGMOG00000034946	crcp (ENSGMOG00000011351)
Euacanthomorphacea	ANCESTRAL SPECIES	20	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00940000155650.a.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Pinecone sodierfish	MODERN SPECIES	5	ENSMMDG00005012990	dpp3 (ENSMMDG00005013042)	ENSMMDG00005014507	ENSMMDG00005014511	ENSMMDG00005014515	FAM89B (ENSMMDG00005014550)	znrd2 (ENSMMDG00005014553)	ENSMMDG00005014557	arr3a (ENSMMDG00005014566)	MCF2 (ENSMMDG00005014684)	f9b (ENSMMDG00005014696)	fgf13b (ENSMMDG00005014772)	afap1l1b (ENSMMDG00005014778)	ablim3 (ENSMMDG00005014796)	ENSMMDG00005014873	ubtd2 (ENSMMDG00005014952) #22	ENSMMDG00005014953	ublcp1 (ENSMMDG00005014958)	RNF145 (ENSMMDG00005014960)	EBF1 (ENSMMDG00005015002)	CLINT1 (ENSMMDG00005015146)	ENSMMDG00005015150	TCERG1 (ENSMMDG00005015160)	PCYOX1L (ENSMMDG00005016352)	CREBRF (ENSMMDG00005016358) #15	BNIP1 (ENSMMDG00005016363) #14	STC2 (ENSMMDG00005016367) #12	bod1 (ENSMMDG00005016372)	htatsf1 (ENSMMDG00005016373)	tmtops3b (ENSMMDG00005016399)	tpst1l (ENSMMDG00005016405)
Percomorphaceae	ANCESTRAL SPECIES	9	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00940000155650.a.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Tiger tail seahorse	MODERN SPECIES	408	zgc:92664 (ENSHCOG00000008797)	rnasekb (ENSHCOG00000008838)	ENSHCOG00000000284	ENSHCOG00000008867	ENSHCOG00000008921	TRAPPC14 (ENSHCOG00000008955)	ENSHCOG00000008979	ENSHCOG00000008991	znrd2 (ENSHCOG00000009015)	glo1 (ENSHCOG00000009034)	AFAP1L1 (ENSHCOG00000009048)	fgf13b (ENSHCOG00000009068)	f9b (ENSHCOG00000009166)	ENSHCOG00000000289	arr3a (ENSHCOG00000009213)	ubtd2 (ENSHCOG00000009229) #22	ublcp1 (ENSHCOG00000009253)	RNF145 (ENSHCOG00000009281)
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b.e	ENSGT00940000161042	ENSGT00940000155650.a.b.f	ENSGT00390000006030.d.a.a
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000021324	ENSMAMG00000021319	ENSMAMG00000021313	ENSMAMG00000021310	ENSMAMG00000021308	ENSMAMG00000021306	ENSMAMG00000021305	ENSMAMG00000026960	znrd2 (ENSMAMG00000021302)	arr3a (ENSMAMG00000021288)	f9b (ENSMAMG00000021280)	fgf13b (ENSMAMG00000021278)	ENSMAMG00000021277	ENSMAMG00000021268	ENSMAMG00000028249	ubtd2 (ENSMAMG00000021262) #22	ENSMAMG00000021258	ublcp1 (ENSMAMG00000021251)	RNF145 (ENSMAMG00000021243)	EBF1 (ENSMAMG00000021229)	ENSMAMG00000021225	bod1 (ENSMAMG00000021222)	STC2 (ENSMAMG00000028227) #12	ENSMAMG00000021210 #14	CREBRF (ENSMAMG00000021202) #15	ENSMAMG00000021200	ENSMAMG00000021183	ENSMAMG00000021172	tpst1l (ENSMAMG00000021169)	crcp (ENSMAMG00000021168)	ENSMAMG00000021167
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00940000165121.a	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b.e	ENSGT00940000161042	ENSGT00940000155650.a.b.f	ENSGT00390000006030.d.a.a
Siamese fighting fish	MODERN SPECIES	5	ENSBSLG00000004933	rbm14a (ENSBSLG00000005705)	ENSBSLG00000005721	dpp3 (ENSBSLG00000005747)	ENSBSLG00000005847	ENSBSLG00000006527	ENSBSLG00000006904	arr3a (ENSBSLG00000006943)	MCF2 (ENSBSLG00000007277)	f9b (ENSBSLG00000007295)	fgf13b (ENSBSLG00000007304)	fgf13b (ENSBSLG00000007364)	afap1l1b (ENSBSLG00000007409)	ablim3 (ENSBSLG00000007431)	ENSBSLG00000007652	ubtd2 (ENSBSLG00000007655) #22	ENSBSLG00000007661	ublcp1 (ENSBSLG00000007663)	RNF145 (ENSBSLG00000007668)	EBF1 (ENSBSLG00000007687)	htatsf1 (ENSBSLG00000008470)	ENSBSLG00000008662	bod1 (ENSBSLG00000008667)	STC2 (ENSBSLG00000008679) #12	STC2 (ENSBSLG00000008694) #12	BNIP1 (ENSBSLG00000008712) #14	CREBRF (ENSBSLG00000008717) #15	PCYOX1L (ENSBSLG00000008733)	ENSBSLG00000008743	ENSBSLG00000008751	ENSBSLG00000008764
Climbing perch	MODERN SPECIES	5	ENSATEG00000009786	ENSATEG00000009742	ENSATEG00000009700	ENSATEG00000009685	ENSATEG00000009590	ENSATEG00000009572	ENSATEG00000009536	znrd2 (ENSATEG00000009457)	arr3a (ENSATEG00000009399)	ENSATEG00000029303	f9b (ENSATEG00000009307)	fgf13b (ENSATEG00000009279)	ENSATEG00000009262	ENSATEG00000009150	ENSATEG00000026283	ubtd2 (ENSATEG00000009133) #22	IL12B (ENSATEG00000009107)	ublcp1 (ENSATEG00000009067)	RNF145 (ENSATEG00000009011)	EBF1 (ENSATEG00000008930)	ENSATEG00000008903	bod1 (ENSATEG00000028746)	STC2 (ENSATEG00000008869) #12	ENSATEG00000025959 #14	CREBRF (ENSATEG00000008829) #15	ENSATEG00000008819	ENSATEG00000008799	ENSATEG00000026150	ENSATEG00000008713	tpst1l (ENSATEG00000008696)	crcp (ENSATEG00000008670)
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Barramundi perch	MODERN SPECIES	94	ENSLCAG00010020506	ENSLCAG00010020508	ENSLCAG00010020510	EHBP1L1 (ENSLCAG00010020515)	ENSLCAG00010020519	FAM89B (ENSLCAG00010020520)	znrd2 (ENSLCAG00010020521)	arr3a (ENSLCAG00010020523)	MCF2 (ENSLCAG00010020530)	f9b (ENSLCAG00010020548)	fgf13b (ENSLCAG00010020552)	afap1l1b (ENSLCAG00010020555)	ablim3 (ENSLCAG00010020559)	ENSLCAG00010020565	ADRB2 (ENSLCAG00010020568)	ubtd2 (ENSLCAG00010020575) #22	IL12B (ENSLCAG00010020580)	ublcp1 (ENSLCAG00010020583)	RNF145 (ENSLCAG00010020593)	EBF1 (ENSLCAG00010020655)	CLINT1 (ENSLCAG00010020851)	ENSLCAG00010020854	TCERG1 (ENSLCAG00010020910)	PCYOX1L (ENSLCAG00010021088)	CREBRF (ENSLCAG00010021095) #15	BNIP1 (ENSLCAG00010021103) #14	STC2 (ENSLCAG00010021108) #12	bod1 (ENSLCAG00010021113)	htatsf1 (ENSLCAG00010021118)	tmtops3b (ENSLCAG00010021127)	tpst1l (ENSLCAG00010021131)
Seriola	ANCESTRAL SPECIES	2	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k
Yellowtail amberjack	MODERN SPECIES	3182	rbm14a (ENSSLDG00000006311)	ENSSLDG00000006297	dpp3 (ENSSLDG00000006251)	ENSSLDG00000006236	ENSSLDG00000006214	ENSSLDG00000006034	FAM89B (ENSSLDG00000005992)	znrd2 (ENSSLDG00000005954)	arr3a (ENSSLDG00000005892)	MCF2 (ENSSLDG00000005831)	f9b (ENSSLDG00000005785)	fgf13b (ENSSLDG00000005756)	afap1l1b (ENSSLDG00000005707)	ablim3 (ENSSLDG00000005644)	ADRB2 (ENSSLDG00000005630)	ubtd2 (ENSSLDG00000005600) #22	IL12B (ENSSLDG00000005564)	ublcp1 (ENSSLDG00000005505)	RNF145 (ENSSLDG00000005450)	EBF1 (ENSSLDG00000005360)
Greater amberjack	MODERN SPECIES	15	rbm14a (ENSSDUG00000020756)	ENSSDUG00000020744	dpp3 (ENSSDUG00000020699)	ENSSDUG00000020686	ENSSDUG00000020670	ENSSDUG00000020657	FAM89B (ENSSDUG00000020652)	znrd2 (ENSSDUG00000020640)	arr3a (ENSSDUG00000020460)	MCF2 (ENSSDUG00000020394)	f9b (ENSSDUG00000020377)	fgf13b (ENSSDUG00000020368)	afap1l1b (ENSSDUG00000020317)	ablim3 (ENSSDUG00000020212)	ADRB2 (ENSSDUG00000020160)	ubtd2 (ENSSDUG00000020150) #22	IL12B (ENSSDUG00000020130)	ublcp1 (ENSSDUG00000020092)	RNF145 (ENSSDUG00000020056)	EBF1 (ENSSDUG00000020020)	htatsf1 (ENSSDUG00000020002)	ENSSDUG00000019984	STC2 (ENSSDUG00000019965) #12	BNIP1 (ENSSDUG00000019948) #14	CREBRF (ENSSDUG00000019886) #15	PCYOX1L (ENSSDUG00000019862)	TCERG1 (ENSSDUG00000019753)	ENSSDUG00000019725	CLINT1 (ENSSDUG00000019673)	tpst1l (ENSSDUG00000019645)	crcp (ENSSDUG00000019628)
Pleuronectoidei	ANCESTRAL SPECIES	23	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b
Turbot	MODERN SPECIES	16	RFXAP (ENSSMAG00000003100)	ENSSMAG00000003066	ENSSMAG00000003042	CREBRF (ENSSMAG00000003032) #15	ENSSMAG00000021794 #14	STC2 (ENSSMAG00000002986) #12	ENSSMAG00000002865	ENSSMAG00000002970	znrd2 (ENSSMAG00000002957)	arr3a (ENSSMAG00000002928)	ENSSMAG00000002888	fgf13b (ENSSMAG00000002856)	ENSSMAG00000002828	ENSSMAG00000002722	ENSSMAG00000002705	ubtd2 (ENSSMAG00000002687) #22	IL12B (ENSSMAG00000002666)	ublcp1 (ENSSMAG00000002625)	RNF145 (ENSSMAG00000002608)	EBF1 (ENSSMAG00000002578)	ENSSMAG00000002279	ENSSMAG00000033947	ENSSMAG00000002252	ENSSMAG00000002154	ENSSMAG00000002131	ENSSMAG00000002055	ENSSMAG00000001983	ENSSMAG00000001966	ENSSMAG00000001953	slc7a3a (ENSSMAG00000001935)	snx12 (ENSSMAG00000001920)
Tongue sole	MODERN SPECIES	10	ENSCSEG00000019720	RAB39B (ENSCSEG00000019722)	ENSCSEG00000019727	dpp3 (ENSCSEG00000019735)	ENSCSEG00000019756	ENSCSEG00000019760	ENSCSEG00000019780	znrd2 (ENSCSEG00000019789)	arr3a (ENSCSEG00000019793)	MCF2 (ENSCSEG00000019810)	f9b (ENSCSEG00000019826)	fgf13b (ENSCSEG00000019840)	afap1l1b (ENSCSEG00000019859)	ablim3 (ENSCSEG00000019869)	ENSCSEG00000019904	ubtd2 (ENSCSEG00000019907) #22	IL12B (ENSCSEG00000019912)	ublcp1 (ENSCSEG00000019918)	RNF145 (ENSCSEG00000019927)	EBF1 (ENSCSEG00000019931)	thoc2 (ENSCSEG00000019946)	stag2a (ENSCSEG00000019962)	ENSCSEG00000019978	ENSCSEG00000019987	ENSCSEG00000019993	myo1ca (ENSCSEG00000020002)	ENSCSEG00000020025	DSCAML1 (ENSCSEG00000020036)	LTBP3 (ENSCSEG00000020073)	ENSCSEG00000020103	ENSCSEG00000020107
Eupercaria	ANCESTRAL SPECIES	17	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Tetraodontidae	ANCESTRAL SPECIES	6	ENSGT00950000182902.b.b.a	ENSGT00390000011517.a.a.c.a.a	ENSGT00940000159328	ENSGT00940000157430.a.a	ENSGT00940000154049.a	ENSGT00940000160421.j	ENSGT00940000163922.a.e	ENSGT00940000166536	ENSGT00510000047446	ENSGT00940000158885	ENSGT00940000159212.b	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.b.a.a	ENSGT00530000063975.j.b	ENSGT01020000230354.B.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00940000155650.a.b	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189
Tetraodon	MODERN SPECIES	22	smg6 (ENSTNIG00000016164)	coro6 (ENSTNIG00000016163)	ssh2b (ENSTNIG00000016162)	nsrp1 (ENSTNIG00000016161)	ENSTNIG00000016160	slc47a1 (ENSTNIG00000016159)	ENSTNIG00000016158	supt6h (ENSTNIG00000016157)	sdf2 (ENSTNIG00000000130)	ENSTNIG00000016156	ENSTNIG00000000974	ENSTNIG00000016155	mettl27 (ENSTNIG00000016154)	nf2b (ENSTNIG00000016153)	ADRB2 (ENSTNIG00000016152)	ubtd2 (ENSTNIG00000016151) #22	IL12B (ENSTNIG00000001795)	ublcp1 (ENSTNIG00000016150)	RNF145 (ENSTNIG00000016149)	EBF1 (ENSTNIG00000016148)	CLINT1 (ENSTNIG00000016147)	TCERG1 (ENSTNIG00000016146)	ENSTNIG00000016145	CREBRF (ENSTNIG00000016144) #15	BNIP1 (ENSTNIG00000016143) #14	STC2 (ENSTNIG00000016142) #12	bod1 (ENSTNIG00000016141)	htatsf1 (ENSTNIG00000016140)	tmtops3b (ENSTNIG00000016139)	tpst1l (ENSTNIG00000016138)	crcp (ENSTNIG00000016137)
Fugu	MODERN SPECIES	6	ssh2b (ENSTRUG00000020830)	nsrp1 (ENSTRUG00000000226)	ENSTRUG00000000168	slc47a1 (ENSTRUG00000000140)	ENSTRUG00000014481	supt6h (ENSTRUG00000014399)	sdf2 (ENSTRUG00000014371)	ENSTRUG00000014343	cbln17 (ENSTRUG00000030847)	cbln17 (ENSTRUG00000030103)	cbln17 (ENSTRUG00000014339)	cbln17 (ENSTRUG00000030547)	mettl27 (ENSTRUG00000014311)	nf2b (ENSTRUG00000014195)	ADRB2 (ENSTRUG00000014131)	ubtd2 (ENSTRUG00000020332) #22	ENSTRUG00000014071	ublcp1 (ENSTRUG00000014010)	RNF145 (ENSTRUG00000013909)	EBF1 (ENSTRUG00000013805)	CLINT1 (ENSTRUG00000013748)	TCERG1 (ENSTRUG00000013639)	PCYOX1L (ENSTRUG00000013590)	CREBRF (ENSTRUG00000013514) #15	BNIP1 (ENSTRUG00000027694) #14	STC2 (ENSTRUG00000013474) #12	htatsf1 (ENSTRUG00000013383)	tmtops3b (ENSTRUG00000013247)	tpst1l (ENSTRUG00000013179)	crcp (ENSTRUG00000025161)	asl (ENSTRUG00000012953)
Eupecaria_A	ANCESTRAL SPECIES	17	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	79														ENSLBEG00000001592	ADRB2 (ENSLBEG00000001430)	ubtd2 (ENSLBEG00000001406) #22	ENSLBEG00000001365	ublcp1 (ENSLBEG00000001310)	RNF145 (ENSLBEG00000001256)	EBF1 (ENSLBEG00000001189)	htatsf1 (ENSLBEG00000001154)	ENSLBEG00000001137	BNIP1 (ENSLBEG00000001098) #14	CREBRF (ENSLBEG00000001041) #15	PCYOX1L (ENSLBEG00000000989)	TCERG1 (ENSLBEG00000000954)	ENSLBEG00000000880	tpst1l (ENSLBEG00000000840)	crcp (ENSLBEG00000000804)	ENSLBEG00000000790	asl (ENSLBEG00000000732)
Ballan wrasse	MODERN SPECIES	4000																ubtd2 (ENSLBEG00000002386) #22
Eupecaria_B	ANCESTRAL SPECIES	17	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Eupecaria_C	ANCESTRAL SPECIES	15	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	12	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189
European seabass	MODERN SPECIES	4	ENSDLAG00005002017	ENSDLAG00005001969	ENSDLAG00005001966	ENSDLAG00005001861	ENSDLAG00005001837	ENSDLAG00005001826	ENSDLAG00005029223	ENSDLAG00005027186	arr3a (ENSDLAG00005001553)	MCF2 (ENSDLAG00005001180)	f9b (ENSDLAG00005028462)	fgf13b (ENSDLAG00005001154)	ENSDLAG00005001131	ENSDLAG00005001118	ENSDLAG00005001112	ubtd2 (ENSDLAG00005034075) #22	IL12B (ENSDLAG00005001099)	ublcp1 (ENSDLAG00005001095)	RNF145 (ENSDLAG00005001084)	EBF1 (ENSDLAG00005001006)	ENSDLAG00005000984	ENSDLAG00005029702	BNIP1 (ENSDLAG00005028746) #14	ENSDLAG00005034378 #12	ENSDLAG00005031176 #15	ENSDLAG00005000752	ENSDLAG00005000723	ENSDLAG00005000717	ENSDLAG00005000699	tpst1l (ENSDLAG00005000690)	ENSDLAG00005000684
Large yellow croaker	MODERN SPECIES	493																ubtd2 (ENSLCRG00005012927) #22	IL12B (ENSLCRG00005012929)	ublcp1 (ENSLCRG00005012930)	ENSLCRG00005012932	RNF145 (ENSLCRG00005012936)	EBF1 (ENSLCRG00005012955)	ENSLCRG00005013046	CLINT1 (ENSLCRG00005013049)	TCERG1 (ENSLCRG00005013055)	CREBRF (ENSLCRG00005013069) #15	BNIP1 (ENSLCRG00005013071) #14	STC2 (ENSLCRG00005013074) #12	bod1 (ENSLCRG00005013076)	htatsf1 (ENSLCRG00005013078)	tmtops3b (ENSLCRG00005013082)	tpst1l (ENSLCRG00005013083)
Gilthead seabream	MODERN SPECIES	4	rbm14a (ENSSAUG00010011259)	ENSSAUG00010011260	dpp3 (ENSSAUG00010011265)	ENSSAUG00010011359	ENSSAUG00010011361	ENSSAUG00010011366	FAM89B (ENSSAUG00010011372)	znrd2 (ENSSAUG00010011373)	arr3a (ENSSAUG00010011383)	ENSSAUG00010011795	fgf13b (ENSSAUG00010011799)	afap1l1b (ENSSAUG00010011804)	ablim3 (ENSSAUG00010011815)	ENSSAUG00010011821	ADRB2 (ENSSAUG00010011822)	ubtd2 (ENSSAUG00010011825) #22	IL12B (ENSSAUG00010011827)	ublcp1 (ENSSAUG00010011828)	RNF145 (ENSSAUG00010011831)	EBF1 (ENSSAUG00010011838)	crcp (ENSSAUG00010011882)	CLINT1 (ENSSAUG00010011892)	TCERG1 (ENSSAUG00010011896)	PCYOX1L (ENSSAUG00010011914)	CREBRF (ENSSAUG00010011917) #15	BNIP1 (ENSSAUG00010011920) #14	STC2 (ENSSAUG00010011922) #12	bod1 (ENSSAUG00010011927)	tmtops3b (ENSSAUG00010011929)	tpst1l (ENSSAUG00010011935)	ENSSAUG00010011937
Perciformes	ANCESTRAL SPECIES	22	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Cottioidei	ANCESTRAL SPECIES	10	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189
Lumpfish	MODERN SPECIES	5	rbm14a (ENSCLMG00005005605)	ENSCLMG00005005604	dpp3 (ENSCLMG00005005471)	ENSCLMG00005005451	ENSCLMG00005005288	EHBP1L1 (ENSCLMG00005005276)	FAM89B (ENSCLMG00005005274)	znrd2 (ENSCLMG00005005273)	arr3a (ENSCLMG00005005270)	MCF2 (ENSCLMG00005005267)	f9b (ENSCLMG00005005044)	fgf13b (ENSCLMG00005005005)	afap1l1b (ENSCLMG00005004996)	ABLIM3 (ENSCLMG00005004981)	ADRB2 (ENSCLMG00005004873)	ubtd2 (ENSCLMG00005004863) #22	IL12B (ENSCLMG00005004829)	ublcp1 (ENSCLMG00005004823)	RNF145 (ENSCLMG00005004819)	EBF1 (ENSCLMG00005004801)	htatsf1 (ENSCLMG00005004701)	bod1 (ENSCLMG00005004676)	STC2 (ENSCLMG00005004659) #12	BNIP1 (ENSCLMG00005004636) #14	CREBRF (ENSCLMG00005004612) #15	PCYOX1L (ENSCLMG00005004338)	TCERG1 (ENSCLMG00005014974)	ENSCLMG00005014951	tmtops3b (ENSCLMG00005014888)	tpst1l (ENSCLMG00005014883)	crcp (ENSCLMG00005014880)
Stickleback	MODERN SPECIES	7	ENSGACG00000020439	rbm14a (ENSGACG00000020440)	dpp3 (ENSGACG00000020441)	ENSGACG00000020442	ENSGACG00000020443	ENSGACG00000020444	znrd2 (ENSGACG00000020445)	arr3a (ENSGACG00000020446)	MCF2 (ENSGACG00000020447)	ENSGACG00000020448	f9b (ENSGACG00000020449)	fgf13b (ENSGACG00000020450)	afap1l1b (ENSGACG00000020451)	ablim3 (ENSGACG00000020452)	ADRB2 (ENSGACG00000020453)	ubtd2 (ENSGACG00000020454) #22	IL12B (ENSGACG00000020455)	ublcp1 (ENSGACG00000020456)	RNF145 (ENSGACG00000020457)	EBF1 (ENSGACG00000020458)	htatsf1 (ENSGACG00000020459)	bod1 (ENSGACG00000020460)	BNIP1 (ENSGACG00000020461) #14	CREBRF (ENSGACG00000020462) #15	PCYOX1L (ENSGACG00000020463)	TCERG1 (ENSGACG00000020464)	ENSGACG00000020465	tmtops3b (ENSGACG00000020466)	tpst1l (ENSGACG00000020467)	crcp (ENSGACG00000020468)	ENSGACG00000020469
Perciformes_a	ANCESTRAL SPECIES	20	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Channel bull blenny	MODERN SPECIES	5	rbm14a (ENSCGOG00000003732)	ENSCGOG00000003731	dpp3 (ENSCGOG00000002275)	ENSCGOG00000002251	ENSCGOG00000002218	ENSCGOG00000002205	FAM89B (ENSCGOG00000002201)	znrd2 (ENSCGOG00000002199)	arr3a (ENSCGOG00000002149)	MCF2 (ENSCGOG00000002108)	f9b (ENSCGOG00000002069)	fgf13b (ENSCGOG00000002054)	afap1l1b (ENSCGOG00000002048)	ablim3 (ENSCGOG00000002042)	ADRB2 (ENSCGOG00000002027)	ubtd2 (ENSCGOG00000002024) #22	IL12B (ENSCGOG00000002018)	ublcp1 (ENSCGOG00000001909)	RNF145 (ENSCGOG00000001840)	EBF1 (ENSCGOG00000001634)	htatsf1 (ENSCGOG00000014980)	bod1 (ENSCGOG00000014976)	STC2 (ENSCGOG00000014964) #12	BNIP1 (ENSCGOG00000014957) #14	CREBRF (ENSCGOG00000014949) #15	PCYOX1L (ENSCGOG00000014943)	TCERG1 (ENSCGOG00000014714)	ENSCGOG00000014707	ENSCGOG00000014705	tmtops3b (ENSCGOG00000014693)	tpst1l (ENSCGOG00000014692)
Pike perch	MODERN SPECIES	54	ENSSLUG00000001536	dpp3 (ENSSLUG00000001703)	ENSSLUG00000001803	ENSSLUG00000001816	ENSSLUG00000001820	ENSSLUG00000001830	FAM89B (ENSSLUG00000001839)	znrd2 (ENSSLUG00000001844)	arr3a (ENSSLUG00000001877)	MCF2 (ENSSLUG00000001968)	f9b (ENSSLUG00000001995)	fgf13b (ENSSLUG00000002001)	afap1l1b (ENSSLUG00000002083)	ablim3 (ENSSLUG00000002122)	ADRB2 (ENSSLUG00000002154)	ubtd2 (ENSSLUG00000002159) #22	IL12B (ENSSLUG00000002170)	ublcp1 (ENSSLUG00000002180)	RNF145 (ENSSLUG00000002193)	EBF1 (ENSSLUG00000002218)	htatsf1 (ENSSLUG00000002251)	bod1 (ENSSLUG00000002291)	STC2 (ENSSLUG00000002300) #12	BNIP1 (ENSSLUG00000002323) #14	CREBRF (ENSSLUG00000002328) #15	PCYOX1L (ENSSLUG00000002331)	TCERG1 (ENSSLUG00000002376)	ENSSLUG00000002914	ENSSLUG00000002966	tmtops3b (ENSSLUG00000003282)	tpst1l (ENSSLUG00000003289)
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Oryzias	ANCESTRAL SPECIES	14	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k
Oryzias_b	ANCESTRAL SPECIES	13	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k
Indian medaka	MODERN SPECIES	4	rbm14a (ENSOMEG00000006508)	ENSOMEG00000006537	dpp3 (ENSOMEG00000006610)	ENSOMEG00000006620	ENSOMEG00000006664	ENSOMEG00000006734	znrd2 (ENSOMEG00000006765)	arr3a (ENSOMEG00000006803)	MCF2 (ENSOMEG00000006840)	tert (ENSOMEG00000006967)	f9b (ENSOMEG00000007003)	fgf13b (ENSOMEG00000007025)	afap1l1b (ENSOMEG00000007075)	ablim3 (ENSOMEG00000007193)	ADRB2 (ENSOMEG00000007249)	ubtd2 (ENSOMEG00000007255) #22	IL12B (ENSOMEG00000007298)	ublcp1 (ENSOMEG00000007357)	RNF145 (ENSOMEG00000007416)	EBF1 (ENSOMEG00000007507)	htatsf1 (ENSOMEG00000007564)	bod1 (ENSOMEG00000007588)	BNIP1 (ENSOMEG00000007608) #14	CREBRF (ENSOMEG00000000190) #15	PCYOX1L (ENSOMEG00000007716)	TCERG1 (ENSOMEG00000007795)	CLINT1 (ENSOMEG00000007904)	tmtops3b (ENSOMEG00000007938)	tpst1l (ENSOMEG00000007967)	crcp (ENSOMEG00000008006)	asl (ENSOMEG00000008092)
Javanese ricefish	MODERN SPECIES	5	ENSOJAG00000009868	dpp3 (ENSOJAG00000009649)	ENSOJAG00000009612	ENSOJAG00000009588	ENSOJAG00000009568	ENSOJAG00000009559	znrd2 (ENSOJAG00000009555)	arr3a (ENSOJAG00000009086)	MCF2 (ENSOJAG00000008879)	ENSOJAG00000008845	f9b (ENSOJAG00000008834)	fgf13b (ENSOJAG00000008788)	afap1l1b (ENSOJAG00000008773)	ablim3 (ENSOJAG00000008739)	ADRB2 (ENSOJAG00000008607)	ubtd2 (ENSOJAG00000008586) #22	ENSOJAG00000008524	ublcp1 (ENSOJAG00000008495)	RNF145 (ENSOJAG00000008356)	EBF1 (ENSOJAG00000006781)	htatsf1 (ENSOJAG00000006497)	bod1 (ENSOJAG00000006467)	ENSOJAG00000006455	BNIP1 (ENSOJAG00000006433) #14	CREBRF (ENSOJAG00000006413) #15	PCYOX1L (ENSOJAG00000006386)	TCERG1 (ENSOJAG00000006210)	CLINT1 (ENSOJAG00000006155)	tmtops3b (ENSOJAG00000006034)	tpst1l (ENSOJAG00000006013)	crcp (ENSOJAG00000005969)
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k
Japanese Medaka HdrR	MODERN SPECIES	5	dpp3 (ENSORLG00000001951)	ENSORLG00000024145	ENSORLG00000001955	ENSORLG00000024591	ENSORLG00000030006	ENSORLG00000028902	znrd2 (ENSORLG00000023825)	arr3a (ENSORLG00000001983)	MCF2 (ENSORLG00000002026)	ENSORLG00000024912	f9b (ENSORLG00000024715)	fgf13b (ENSORLG00000002061)	afap1l1b (ENSORLG00000002101)	ENSORLG00000002194	ENSORLG00000002214	ubtd2 (ENSORLG00000025523) #22	IL12B (ENSORLG00000002238)	ublcp1 (ENSORLG00000002261)	RNF145 (ENSORLG00000002282)	EBF1 (ENSORLG00000002342)	htatsf1 (ENSORLG00000002356)	bod1 (ENSORLG00000025671)	BNIP1 (ENSORLG00000002369) #14	CREBRF (ENSORLG00000002384) #15	PCYOX1L (ENSORLG00000002404)	TCERG1 (ENSORLG00000002439)	CLINT1 (ENSORLG00000002460)	tmtops3b (ENSORLG00000023227)	tpst1l (ENSORLG00000002471)	crcp (ENSORLG00000028784)	ENSORLG00000002486
Chinese medaka	MODERN SPECIES	423																ubtd2 (ENSOSIG00000008721) #22	IL12B (ENSOSIG00000008720)	ublcp1 (ENSOSIG00000008719)	RNF145 (ENSOSIG00000008718)	EBF1 (ENSOSIG00000007782)	htatsf1 (ENSOSIG00000007772)	bod1 (ENSOSIG00000007771)	BNIP1 (ENSOSIG00000007770) #14	CREBRF (ENSOSIG00000007769) #15	PCYOX1L (ENSOSIG00000007768)	TCERG1 (ENSOSIG00000007745)	CLINT1 (ENSOSIG00000007730)	tmtops3b (ENSOSIG00000007728)	tpst1l (ENSOSIG00000007726)	crcp (ENSOSIG00000007723)	ENSOSIG00000007720
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Aplocheiloidei	ANCESTRAL SPECIES	35	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i.b	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189
Mangrove rivulus	MODERN SPECIES	58	rbm14a (ENSKMAG00000008514)	ENSKMAG00000008499	dpp3 (ENSKMAG00000008424)	ENSKMAG00000008389	ENSKMAG00000008349	ENSKMAG00000008225	znrd2 (ENSKMAG00000008182)	arr3a (ENSKMAG00000008151)	MCF2 (ENSKMAG00000008123)	f9b (ENSKMAG00000008098)	fgf13b (ENSKMAG00000008064)	afap1l1b (ENSKMAG00000008026)	ablim3 (ENSKMAG00000007970)	ENSKMAG00000007935	ADRB2 (ENSKMAG00000007924)	ubtd2 (ENSKMAG00000007896) #22	IL12B (ENSKMAG00000007875)	ublcp1 (ENSKMAG00000007828)	RNF145 (ENSKMAG00000007773)	EBF1 (ENSKMAG00000007667)	htatsf1 (ENSKMAG00000007622)	bod1 (ENSKMAG00000007608)	STC2 (ENSKMAG00000007593) #12	BNIP1 (ENSKMAG00000007566) #14	CREBRF (ENSKMAG00000007522) #15	PCYOX1L (ENSKMAG00000007492)	TCERG1 (ENSKMAG00000007448)	ENSKMAG00000007423	ENSKMAG00000007406	tmtops3b (ENSKMAG00000007352)	tpst1l (ENSKMAG00000007322)
Turquoise killifish	MODERN SPECIES	1620	ENSNFUG00015007927	DPP3 (ENSNFUG00015007938)	Nfu_g_1_005373 (ENSNFUG00015007966)	ENSNFUG00015007991	ENSNFUG00015008094	ENSNFUG00015008095	SSSCA1 (ENSNFUG00015008104)	ARR3A (ENSNFUG00015008125)	MCF2B (ENSNFUG00015008350)	ENSNFUG00015008634	f9b (ENSNFUG00015008636)	OLA.13760 (ENSNFUG00015008638)	AFAP1L1B (ENSNFUG00015008640)	ablim3 (ENSNFUG00015008641)	ADRB2B (ENSNFUG00015008648)	UBTD2 (ENSNFUG00015008654) #22	IL12BB (ENSNFUG00015008661)	UBLCP1 (ENSNFUG00015008670)	RNF145 (ENSNFUG00015008678)	ENSNFUG00015008691	ENSNFUG00015008696	EBF1 (ENSNFUG00015008709)	HTATSF1 (ENSNFUG00015008749)	BOD1 (ENSNFUG00015008836)	CABZ01034707.1 (ENSNFUG00015008839) #12	BNIP1 (ENSNFUG00015008846) #14	CREBRF (ENSNFUG00015008855) #15	PCYOX1L (ENSNFUG00015008860)	TCERG1 (ENSNFUG00015008923)	TPST1L (ENSNFUG00015009341)	ENSNFUG00015009369
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
NAME_4	ANCESTRAL SPECIES	12	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Mummichog	MODERN SPECIES	403	ENSFHEG00000020925	dpp3 (ENSFHEG00000020932)	ENSFHEG00000000520	RCE1 (ENSFHEG00000020964)	ENSFHEG00000020974	ENSFHEG00000020980	znrd2 (ENSFHEG00000020993)	arr3a (ENSFHEG00000021032)	MCF2 (ENSFHEG00000022230)	f9b (ENSFHEG00000022273)	fgf13b (ENSFHEG00000022293)	afap1l1b (ENSFHEG00000022326)	ENSFHEG00000022350	ENSFHEG00000022362	ADRB2 (ENSFHEG00000022386)	ubtd2 (ENSFHEG00000022399) #22
Sheepshead minnow	MODERN SPECIES	206	ENSCVAG00000014790	dpp3 (ENSCVAG00000014773)	ENSCVAG00000014702	ENSCVAG00000014695	ENSCVAG00000000370	ENSCVAG00000014598	FAM89B (ENSCVAG00000014584)	znrd2 (ENSCVAG00000014581)	arr3a (ENSCVAG00000014576)	MCF2 (ENSCVAG00000014560)	f9b (ENSCVAG00000014495)	fgf13b (ENSCVAG00000014484)	afap1l1b (ENSCVAG00000014453)	ablim3 (ENSCVAG00000014437)	ADRB2 (ENSCVAG00000014254)	ubtd2 (ENSCVAG00000014249) #22	IL12B (ENSCVAG00000014229)	ublcp1 (ENSCVAG00000014220)	RNF145 (ENSCVAG00000014162)	EBF1 (ENSCVAG00000014113)	htatsf1 (ENSCVAG00000014070)	bod1 (ENSCVAG00000014044)	STC2 (ENSCVAG00000013998) #12	BNIP1 (ENSCVAG00000013923) #14	CREBRF (ENSCVAG00000013884) #15	PCYOX1L (ENSCVAG00000013866)	TCERG1 (ENSCVAG00000013825)	ENSCVAG00000013673	tpst1l (ENSCVAG00000013647)	crcp (ENSCVAG00000013625)	ENSCVAG00000013607
Poeciliinae	ANCESTRAL SPECIES	17	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189
Platyfish	MODERN SPECIES	2	ENSXMAG00000000328	ENSXMAG00000023871	rbm14a (ENSXMAG00000000338)	dpp3 (ENSXMAG00000000342)	ENSXMAG00000027013	ENSXMAG00000028134	FAM89B (ENSXMAG00000000383)	znrd2 (ENSXMAG00000000384)	arr3a (ENSXMAG00000000387)	MCF2 (ENSXMAG00000000404)	f9b (ENSXMAG00000000424)	fgf13b (ENSXMAG00000000441)	afap1l1b (ENSXMAG00000000445)	ablim3 (ENSXMAG00000000456)	ADRB2 (ENSXMAG00000000470)	ubtd2 (ENSXMAG00000026332) #22	IL12B (ENSXMAG00000000474)	ublcp1 (ENSXMAG00000025933)	RNF145 (ENSXMAG00000000480)	EBF1 (ENSXMAG00000000489)	htatsf1 (ENSXMAG00000000490)	bod1 (ENSXMAG00000022469)	STC2 (ENSXMAG00000000495) #12	BNIP1 (ENSXMAG00000000497) #14	CREBRF (ENSXMAG00000000504) #15	PCYOX1L (ENSXMAG00000027639)	TCERG1 (ENSXMAG00000000519)	ENSXMAG00000000532	ENSXMAG00000027186	tmtops3b (ENSXMAG00000007891)	tpst1l (ENSXMAG00000007886)
Poecilia	ANCESTRAL SPECIES	7	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189
Guppy	MODERN SPECIES	444	ENSPREG00000007082	slc7a3a (ENSPREG00000007114)	RAB39B (ENSPREG00000007129)	ENSPREG00000007150	ENSPREG00000007181	rbm14a (ENSPREG00000007274)	dpp3 (ENSPREG00000007298)	ENSPREG00000007366	ENSPREG00000007374	znrd2 (ENSPREG00000007391)	f9b (ENSPREG00000007455)	fgf13b (ENSPREG00000007543)	ENSPREG00000007561	ABLIM3 (ENSPREG00000007581)	ENSPREG00000007607	ubtd2 (ENSPREG00000007621) #22	IL12B (ENSPREG00000007646)	ublcp1 (ENSPREG00000007679)	RNF145 (ENSPREG00000007712)	EBF1 (ENSPREG00000007760)	htatsf1 (ENSPREG00000007811)	bod1 (ENSPREG00000007838)	BNIP1 (ENSPREG00000007862) #14	CREBRF (ENSPREG00000007884) #15	PCYOX1L (ENSPREG00000007899)	TCERG1 (ENSPREG00000007921)	ENSPREG00000008013	tmtops3b (ENSPREG00000008102)	tpst1l (ENSPREG00000008413)	ENSPREG00000008478	crcp (ENSPREG00000008487)
NAME_6	ANCESTRAL SPECIES	1	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189
Amazon molly	MODERN SPECIES	255	ENSPFOG00000004534	ENSPFOG00000004606	rbm14a (ENSPFOG00000004843)	dpp3 (ENSPFOG00000004916)	ENSPFOG00000005048	EHBP1L1 (ENSPFOG00000005065)	FAM89B (ENSPFOG00000005167)	znrd2 (ENSPFOG00000005175)	arr3a (ENSPFOG00000005241)	MCF2 (ENSPFOG00000005613)	f9b (ENSPFOG00000006072)	fgf13b (ENSPFOG00000006203)	afap1l1b (ENSPFOG00000006277)	ABLIM3 (ENSPFOG00000006596)	ADRB2 (ENSPFOG00000007036)	ubtd2 (ENSPFOG00000007096) #22	IL12B (ENSPFOG00000007116)	ublcp1 (ENSPFOG00000007186)	RNF145 (ENSPFOG00000007292)	EBF1 (ENSPFOG00000007531)	htatsf1 (ENSPFOG00000007871)	bod1 (ENSPFOG00000008031)	STC2 (ENSPFOG00000023652) #12	STC2 (ENSPFOG00000008043) #12	BNIP1 (ENSPFOG00000008074) #14	CREBRF (ENSPFOG00000008174) #15	PCYOX1L (ENSPFOG00000008275)	TCERG1 (ENSPFOG00000008374)	tmtops3b (ENSPFOG00000008567)	tpst1l (ENSPFOG00000008572)	crcp (ENSPFOG00000008626)
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	756															ENSPLAG00000007699 #22	ubtd2 (ENSPLAG00000007678) #22	IL12B (ENSPLAG00000007657)	ublcp1 (ENSPLAG00000007624)	RNF145 (ENSPLAG00000007598)	EBF1 (ENSPLAG00000007567)	htatsf1 (ENSPLAG00000007532)	ENSPLAG00000007517	BNIP1 (ENSPLAG00000007496) #14	CREBRF (ENSPLAG00000007488) #15	PCYOX1L (ENSPLAG00000007478)	ENSPLAG00000007469
Sailfin molly	MODERN SPECIES	756																ENSPLAG00000007699 #22	ubtd2 (ENSPLAG00000007678) #22	IL12B (ENSPLAG00000007657)	ublcp1 (ENSPLAG00000007624)	RNF145 (ENSPLAG00000007598)	EBF1 (ENSPLAG00000007567)	htatsf1 (ENSPLAG00000007532)	ENSPLAG00000007517	BNIP1 (ENSPLAG00000007496) #14	CREBRF (ENSPLAG00000007488) #15	PCYOX1L (ENSPLAG00000007478)	ENSPLAG00000007469
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Pomacentridae	ANCESTRAL SPECIES	10	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00940000155650.a.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Pomacentridae_A	ANCESTRAL SPECIES	3	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00940000155650.a.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Amphiprion	ANCESTRAL SPECIES	3	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00940000181697	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00940000181131	ENSGT00940000155650.a.b	ENSGT00940000161042	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT01090000259997.a.d.b.b.b.b.b.c	ENSGT00390000007125.b #15	ENSGT00390000014412.k #14	ENSGT00390000005989.a.b.a.b #12	ENSGT00940000156198.c.b
Clown anemonefish	MODERN SPECIES	739					ENSAOCG00000022607	ENSAOCG00000001958	FAM89B (ENSAOCG00000022438)	znrd2 (ENSAOCG00000022428)	arr3a (ENSAOCG00000022413)	MCF2 (ENSAOCG00000022360)	f9b (ENSAOCG00000022262)	fgf13b (ENSAOCG00000022246)	afap1l1b (ENSAOCG00000022210)	ablim3 (ENSAOCG00000022137)	ADRB2 (ENSAOCG00000021933)	ubtd2 (ENSAOCG00000021918) #22	IL12B (ENSAOCG00000021887)	ublcp1 (ENSAOCG00000021854)	RNF145 (ENSAOCG00000021805)	ENSAOCG00000021742	EBF1 (ENSAOCG00000021715)	ENSAOCG00000021673
Orange clownfish	MODERN SPECIES	6	VMP1 (ENSAPEG00000014734)	ENSAPEG00000014767	ENSAPEG00000014775	rnft1 (ENSAPEG00000014829)	med13a (ENSAPEG00000014866)	ints2 (ENSAPEG00000015071)	AUTS2 (ENSAPEG00000015219)	cxadr (ENSAPEG00000015699)	btg3 (ENSAPEG00000015710)	ENSAPEG00000015722	fgf13b (ENSAPEG00000015730)	ENSAPEG00000015745	afap1l1b (ENSAPEG00000015760)	ablim3 (ENSAPEG00000015796)	ADRB2 (ENSAPEG00000015923)	ubtd2 (ENSAPEG00000015929) #22	IL12B (ENSAPEG00000015946)	ublcp1 (ENSAPEG00000015991)	RNF145 (ENSAPEG00000016047)	ENSAPEG00000016088	EBF1 (ENSAPEG00000016110)	ENSAPEG00000016158	CLINT1 (ENSAPEG00000016192)	TCERG1 (ENSAPEG00000016260)	PCYOX1L (ENSAPEG00000016324)	ENSAPEG00000016336	CREBRF (ENSAPEG00000016349) #15	BNIP1 (ENSAPEG00000016372) #14	STC2 (ENSAPEG00000016395) #12	htatsf1 (ENSAPEG00000016432)	tmtops3b (ENSAPEG00000016478)
Spiny chromis	MODERN SPECIES	673																ubtd2 (ENSAPOG00000009308) #22	ENSAPOG00000009345	ublcp1 (ENSAPOG00000009397)	RNF145 (ENSAPOG00000009468)	EBF1 (ENSAPOG00000009533)	CLINT1 (ENSAPOG00000009588)	TCERG1 (ENSAPOG00000009625)	ENSAPOG00000009654	PCYOX1L (ENSAPOG00000000273)	CREBRF (ENSAPOG00000009721) #15	BNIP1 (ENSAPOG00000009776) #14	htatsf1 (ENSAPOG00000009823)	ENSAPOG00000009867 #12	tmtops3b (ENSAPOG00000001074)	tpst1l (ENSAPOG00000009884)
Bicolor damselfish	MODERN SPECIES	1581															ADRB2 (ENSSPAG00000004532)	ubtd2 (ENSSPAG00000004555) #22	ENSSPAG00000004568	ublcp1 (ENSSPAG00000004604)	RNF145 (ENSSPAG00000004634)	EBF1 (ENSSPAG00000004674)
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Midas cichlid	MODERN SPECIES	60	ENSACIG00000021202	rbm14a (ENSACIG00000021173)	ENSACIG00000021158	dpp3 (ENSACIG00000021133)	ENSACIG00000021111	ENSACIG00000021037	ENSACIG00000020997	znrd2 (ENSACIG00000020951)	arr3a (ENSACIG00000020924)	MCF2 (ENSACIG00000020888)	f9b (ENSACIG00000020872)	fgf13b (ENSACIG00000020858)	afap1l1b (ENSACIG00000020759)	ablim3 (ENSACIG00000020709)	ADRB2 (ENSACIG00000020563)	ubtd2 (ENSACIG00000020544) #22	IL12B (ENSACIG00000020532)	ublcp1 (ENSACIG00000020518)	RNF145 (ENSACIG00000020500)	EBF1 (ENSACIG00000020484)	htatsf1 (ENSACIG00000020459)	ENSACIG00000020454	ENSACIG00000020412	BNIP1 (ENSACIG00000020392) #14	CREBRF (ENSACIG00000020364) #15	PCYOX1L (ENSACIG00000020354)	TCERG1 (ENSACIG00000020318)	ENSACIG00000020307	CLINT1 (ENSACIG00000020282)	tmtops3b (ENSACIG00000020275)	tpst1l (ENSACIG00000020259)
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Burton s mouthbrooder	MODERN SPECIES	347	ENSHBUG00000000085	rbm14a (ENSHBUG00000003665)	ENSHBUG00000003675	dpp3 (ENSHBUG00000003735)	ENSHBUG00000003750	ENSHBUG00000003762	ENSHBUG00000003820	znrd2 (ENSHBUG00000003845)	arr3a (ENSHBUG00000003900)	MCF2 (ENSHBUG00000003923)	f9b (ENSHBUG00000003960)	fgf13b (ENSHBUG00000003999)	afap1l1b (ENSHBUG00000004020)	ablim3 (ENSHBUG00000004111)	ADRB2 (ENSHBUG00000004125)	ubtd2 (ENSHBUG00000004137) #22	IL12B (ENSHBUG00000004166)	ublcp1 (ENSHBUG00000000106)	RNF145 (ENSHBUG00000004241)	EBF1 (ENSHBUG00000004347)	htatsf1 (ENSHBUG00000004392)	ENSHBUG00000004421	BNIP1 (ENSHBUG00000004466) #14	CREBRF (ENSHBUG00000004512) #15	PCYOX1L (ENSHBUG00000004569)	TCERG1 (ENSHBUG00000004587)	ENSHBUG00000004619	ENSHBUG00000004665	tmtops3b (ENSHBUG00000004742)	tpst1l (ENSHBUG00000004760)	crcp (ENSHBUG00000004779)
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000179094	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
P. nyererei	MODERN SPECIES	321	ENSPNYG00000015920	dpp3 (ENSPNYG00000015935)	ENSPNYG00000015996	ENSPNYG00000016023	ENSPNYG00000016038	ENSPNYG00000016088	znrd2 (ENSPNYG00000016233)	arr3a (ENSPNYG00000016254)	MCF2 (ENSPNYG00000016299)	f9b (ENSPNYG00000016364)	fgf13b (ENSPNYG00000016380)	afap1l1b (ENSPNYG00000016417)	ENSPNYG00000016458	ABLIM3 (ENSPNYG00000016482)	ADRB2 (ENSPNYG00000016532)	ubtd2 (ENSPNYG00000016542) #22	IL12B (ENSPNYG00000016585)	ublcp1 (ENSPNYG00000016605)	EBF1 (ENSPNYG00000016643)	htatsf1 (ENSPNYG00000016693)	ENSPNYG00000016725	BNIP1 (ENSPNYG00000016750) #14	CREBRF (ENSPNYG00000016767) #15	PCYOX1L (ENSPNYG00000016803)	TCERG1 (ENSPNYG00000016818)	ENSPNYG00000016846	ENSPNYG00000016867	tmtops3b (ENSPNYG00000016902)	tpst1l (ENSPNYG00000016957)	crcp (ENSPNYG00000016988)	ENSPNYG00000017143
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00950000183068.a.a.a.a	ENSGT00940000157436.b	ENSGT00940000165459.b	ENSGT00390000007335	ENSGT00940000156996.f.b	ENSGT00390000004124.i	ENSGT00940000161027.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641 #22	ENSGT00390000012630.A.a	ENSGT00390000010107	ENSGT00940000157281	ENSGT00950000182859.A.a.b.b.d.c.b	ENSGT00390000009902	ENSGT00940000156198.c.b	ENSGT00390000005989.a.b.a.b #12	ENSGT00390000014412.k #14	ENSGT00390000007125.b #15	ENSGT00390000011206.b	ENSGT00940000157770	ENSGT00940000161042	ENSGT00940000155650.a.b	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a
Zebra mbuna	MODERN SPECIES	1092	rbm14a (ENSMZEG00005001201)	ENSMZEG00005001186	dpp3 (ENSMZEG00005001130)	ENSMZEG00005001121	ENSMZEG00005001114	ENSMZEG00005000973	znrd2 (ENSMZEG00005000923)	arr3a (ENSMZEG00005000912)	MCF2 (ENSMZEG00005000848)	f9b (ENSMZEG00005000838)	fgf13b (ENSMZEG00005000828)	afap1l1b (ENSMZEG00005000815)	ENSMZEG00005000796	ABLIM3 (ENSMZEG00005000761)	ADRB2 (ENSMZEG00005000756)	ubtd2 (ENSMZEG00005000741) #22	IL12B (ENSMZEG00005000714)	ublcp1 (ENSMZEG00005000662)	RNF145 (ENSMZEG00005000588)	EBF1 (ENSMZEG00005000538)	htatsf1 (ENSMZEG00005000485)	bod1 (ENSMZEG00005000477)	STC2 (ENSMZEG00005000115) #12	BNIP1 (ENSMZEG00005025287) #14	CREBRF (ENSMZEG00005025280) #15	PCYOX1L (ENSMZEG00005025274)	TCERG1 (ENSMZEG00005025267)	ENSMZEG00005025265	ENSMZEG00005025262	tmtops3b (ENSMZEG00005025258)	tpst1l (ENSMZEG00005025257)
Eastern happy	MODERN SPECIES	1	ENSACLG00000009386	rbm14a (ENSACLG00000009112)	ENSACLG00000009093	dpp3 (ENSACLG00000009003)	ENSACLG00000008998	ENSACLG00000008975	ENSACLG00000008688	znrd2 (ENSACLG00000008671)	arr3a (ENSACLG00000008617)	MCF2 (ENSACLG00000008594)	f9b (ENSACLG00000008559)	fgf13b (ENSACLG00000008552)	afap1l1b (ENSACLG00000008529)	ablim3 (ENSACLG00000008513)	ADRB2 (ENSACLG00000008511)	ubtd2 (ENSACLG00000008197) #22	IL12B (ENSACLG00000008190)	ublcp1 (ENSACLG00000008166)	RNF145 (ENSACLG00000008134)	ENSACLG00000008130	ENSACLG00000008129	EBF1 (ENSACLG00000008113)	htatsf1 (ENSACLG00000008096)	ENSACLG00000008086	BNIP1 (ENSACLG00000007807) #14	CREBRF (ENSACLG00000007766) #15	PCYOX1L (ENSACLG00000007754)	TCERG1 (ENSACLG00000007702)	ENSACLG00000007689	ENSACLG00000007659	tmtops3b (ENSACLG00000007618)
Lyretail cichlid	MODERN SPECIES	297	ENSNBRG00000004992	rbm14a (ENSNBRG00000004960)	ENSNBRG00000004929	dpp3 (ENSNBRG00000004854)	ENSNBRG00000004809	ENSNBRG00000004786	ENSNBRG00000004721	znrd2 (ENSNBRG00000004693)	arr3a (ENSNBRG00000004388)	MCF2 (ENSNBRG00000004320)	f9b (ENSNBRG00000004304)	fgf13b (ENSNBRG00000004284)	afap1l1b (ENSNBRG00000004182)	ablim3 (ENSNBRG00000004085)	ADRB2 (ENSNBRG00000004061)	ubtd2 (ENSNBRG00000004032) #22	IL12B (ENSNBRG00000004011)	ublcp1 (ENSNBRG00000003982)	RNF145 (ENSNBRG00000003907)	EBF1 (ENSNBRG00000003853)	htatsf1 (ENSNBRG00000003818)	ENSNBRG00000003779	BNIP1 (ENSNBRG00000003746) #14	CREBRF (ENSNBRG00000003698) #15	PCYOX1L (ENSNBRG00000003661)	TCERG1 (ENSNBRG00000003409)	ENSNBRG00000003369	ENSNBRG00000003331	tmtops3b (ENSNBRG00000003163)	tpst1l (ENSNBRG00000003122)	crcp (ENSNBRG00000003094)
Nile tilapia	MODERN SPECIES	1	rbm14a (ENSONIG00000008557)	ENSONIG00000041478	dpp3 (ENSONIG00000008558)	ENSONIG00000027324	ENSONIG00000028970	ENSONIG00000032804	znrd2 (ENSONIG00000028216)	ENSONIG00000031227	arr3a (ENSONIG00000008570)	MCF2 (ENSONIG00000008583)	f9b (ENSONIG00000008591)	fgf13b (ENSONIG00000028040)	afap1l1b (ENSONIG00000008601)	ablim3 (ENSONIG00000008605)	ADRB2 (ENSONIG00000036346)	ubtd2 (ENSONIG00000008615) #22	IL12B (ENSONIG00000008618)	ublcp1 (ENSONIG00000008623)	RNF145 (ENSONIG00000008627)	EBF1 (ENSONIG00000008631)	htatsf1 (ENSONIG00000008638)	bod1 (ENSONIG00000042231)	STC2 (ENSONIG00000008645) #12	BNIP1 (ENSONIG00000008646) #14	CREBRF (ENSONIG00000008647) #15	PCYOX1L (ENSONIG00000008650)	TCERG1 (ENSONIG00000008655)	ENSONIG00000008664	ENSONIG00000008668	tmtops3b (ENSONIG00000008673)	tpst1l (ENSONIG00000008675)
Spotted gar	MODERN SPECIES	672	ENSLOCG00000009487	ENSLOCG00000009482	ENSLOCG00000009475	adra1bb (ENSLOCG00000009467)	ttc1 (ENSLOCG00000009457)	PWWP2A (ENSLOCG00000009452)	fabp6 (ENSLOCG00000009437)	ccnjl (ENSLOCG00000009433)	C1QTNF2 (ENSLOCG00000009423)	slu7 (ENSLOCG00000009410)	grpel2 (ENSLOCG00000009404)	afap1l1a (ENSLOCG00000009385)	ablim3 (ENSLOCG00000009374)	SH3TC2 (ENSLOCG00000009362)	adrb2a (ENSLOCG00000009352)	ubtd2 (ENSLOCG00000009340) #22	EFCAB9 (ENSLOCG00000009328) #23	il12ba (ENSLOCG00000009317)	ublcp1 (ENSLOCG00000009305)	rnf145b (ENSLOCG00000009293)	ebf3a (ENSLOCG00000009282)	clint1a (ENSLOCG00000009271)	LSM11 (ENSLOCG00000009264)	thg1l (ENSLOCG00000009255)	ADAM19 (ENSLOCG00000009244)	ENSLOCG00000009227	GPR151 (ENSLOCG00000018302)	ppp2r2bb (ENSLOCG00000009212)	PCYOX1L (ENSLOCG00000009203)	IL17B (ENSLOCG00000009196)	rpl26 (ENSLOCG00000009189) #17
Elephant shark	MODERN SPECIES	1572	cdkn2aipnl (ENSCMIG00000006324)	ENSCMIG00000006290	ppp2cab (ENSCMIG00000006272)	SKP1 (ENSCMIG00000006268)	ENSCMIG00000006266	ENSCMIG00000006265	cyp2u1 (ENSCMIG00000006261)	vdac1 (ENSCMIG00000006252)	ENSCMIG00000006248	FSTL4 (ENSCMIG00000006230)	RAPGEF6 (ENSCMIG00000005650)	ENSCMIG00000004631	ENSCMIG00000004338	ENSCMIG00000004323	pdlim4 (ENSCMIG00000004312)	ubtd2 (ENSCMIG00000004309) #22	ENSCMIG00000004306 #23	STK10 (ENSCMIG00000003838) #25	SH3PXD2B (ENSCMIG00000003689) #21	neurl1b (ENSCMIG00000003684) #20