Sarcopterygii	ANCESTRAL SPECIES	47		ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00940000161330	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.b #16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Tetrapoda	ANCESTRAL SPECIES	29	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00940000161330	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.d ##16	ENSGT00390000014165.c.b #16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8
Amniota	ANCESTRAL SPECIES	17	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00940000161330	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00390000014165.c.b #16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8
Mammalia	ANCESTRAL SPECIES	32																ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00390000014165.c.b #16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8
Theria	ANCESTRAL SPECIES	18	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00390000014165.c.a.a ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052 #29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Primates	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00940000163300	ENSGT00390000014165.c.a.a.h.g ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.s #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.g.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Mas night monkey	MODERN SPECIES	610	C5orf47 (ENSANAG00000026045) #7	CPEB4 (ENSANAG00000038371) #8	BOD1 (ENSANAG00000025713) #9	STC2 (ENSANAG00000031511) #10	NKX2-5 (ENSANAG00000024360) #11	BNIP1 (ENSANAG00000033155) #12	ENSANAG00000026625 #13	CREBRF (ENSANAG00000029119) #14	ENSANAG00000025907 #15	RPL26L1 (ENSANAG00000034277) #16	ENSANAG00000033316 #17	ERGIC1 (ENSANAG00000037298) #18	DUSP1 (ENSANAG00000027062) #19	NEURL1B (ENSANAG00000038171) #20	SH3PXD2B (ENSANAG00000014072) #21	UBTD2 (ENSANAG00000033217) #22	EFCAB9 (ENSANAG00000032826) #23	STK10 (ENSANAG00000027679) #24	FBXW11 (ENSANAG00000036790) #25	ENSANAG00000024342 #26	SMIM23 (ENSANAG00000018501) #27	FGF18 (ENSANAG00000028876) #28	ENSANAG00000034949 #29	TLX3 (ENSANAG00000029429) #30	ENSANAG00000021888 #31	ENSANAG00000031950 #32	RANBP17 (ENSANAG00000028172) #33	GABRP (ENSANAG00000029839) #34	KCNMB1 (ENSANAG00000034763) #35	KCNIP1 (ENSANAG00000014990) #36	LCP2 (ENSANAG00000031590) #37
Cebidae	ANCESTRAL SPECIES	24	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.s #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.g.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Marmoset	MODERN SPECIES	11	ENSCJAG00000067799	ENSCJAG00000075851	NSG2 (ENSCJAG00000019152)	C5orf47 (ENSCJAG00000076312) #7	CPEB4 (ENSCJAG00000019166) #8	ENSCJAG00000031971 ##9	ENSCJAG00000045816	STC2 (ENSCJAG00000054466) #10	NKX2-5 (ENSCJAG00000078127) #11	BNIP1 (ENSCJAG00000019186) #12	CREBRF (ENSCJAG00000019193) #14	ERGIC1 (ENSCJAG00000019238) #18	DUSP1 (ENSCJAG00000067622) #19	NEURL1B (ENSCJAG00000019254) #20	SH3PXD2B (ENSCJAG00000019258) #21	UBTD2 (ENSCJAG00000046779) #22	ENSCJAG00000047953	EFCAB9 (ENSCJAG00000019273) #23	ENSCJAG00000069421	ENSCJAG00000069688	STK10 (ENSCJAG00000019275) #24	ENSCJAG00000073693	FBXW11 (ENSCJAG00000019297) #25	SMIM23 (ENSCJAG00000019324) #27	FGF18 (ENSCJAG00000019329) #28	ENSCJAG00000019334 ##29	TLX3 (ENSCJAG00000038714) #30	ENSCJAG00000038990	ENSCJAG00000083773	RANBP17 (ENSCJAG00000019368) #33	GABRP (ENSCJAG00000019417) #34
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.s #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.g.b.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Bolivian squirrel monkey	MODERN SPECIES	123	NSG2 (ENSSBOG00000028874)	C5orf47 (ENSSBOG00000011758) #7	CPEB4 (ENSSBOG00000002632) #8	ENSSBOG00000023774 ##9	STC2 (ENSSBOG00000035805) #10	NKX2-5 (ENSSBOG00000024121) #11	BNIP1 (ENSSBOG00000029104) #12	ENSSBOG00000026680 ##13	CREBRF (ENSSBOG00000031151) #14	ATP6V0E1 (ENSSBOG00000031772) #15	RPL26L1 (ENSSBOG00000027992) #16	ERGIC1 (ENSSBOG00000032967) #18	DUSP1 (ENSSBOG00000027324) #19	NEURL1B (ENSSBOG00000029939) #20	SH3PXD2B (ENSSBOG00000014112) #21	UBTD2 (ENSSBOG00000013274) #22	EFCAB9 (ENSSBOG00000019620) #23	STK10 (ENSSBOG00000033405) #24	FBXW11 (ENSSBOG00000023046) #25	SMIM23 (ENSSBOG00000018130) #27	FGF18 (ENSSBOG00000024519) #28	ENSSBOG00000033634 ##29	TLX3 (ENSSBOG00000034367) #30	RANBP17 (ENSSBOG00000032147) #33	GABRP (ENSSBOG00000028102) #34	KCNIP1 (ENSSBOG00000001622) #36	KCNMB1 (ENSSBOG00000026355) #35	LCP2 (ENSSBOG00000035016) #37	C5orf58 (ENSSBOG00000020509)	FOXI1 (ENSSBOG00000033617)	DOCK2 (ENSSBOG00000026287)
Capuchin	MODERN SPECIES	200								ENSCCAG00000036235 #14	ENSCCAG00000030182 #15	RPL26L1 (ENSCCAG00000022572) #16	ERGIC1 (ENSCCAG00000027066) #18	DUSP1 (ENSCCAG00000028115) #19	ENSCCAG00000023304	NEURL1B (ENSCCAG00000024696) #20	SH3PXD2B (ENSCCAG00000018545) #21	UBTD2 (ENSCCAG00000030325) #22	EFCAB9 (ENSCCAG00000030106) #23	STK10 (ENSCCAG00000021548) #24	ENSCCAG00000034903 #25	ENSCCAG00000035992 ##29	SMIM23 (ENSCCAG00000027927) #27	FGF18 (ENSCCAG00000025826) #28	ENSCCAG00000034814 ##29	TLX3 (ENSCCAG00000022971) #30	RANBP17 (ENSCCAG00000021816) #33	GABRP (ENSCCAG00000027392) #34	KCNIP1 (ENSCCAG00000025512) #36	KCNMB1 (ENSCCAG00000029582) #35	LCP2 (ENSCCAG00000014560) #37	ENSCCAG00000019246	FOXI1 (ENSCCAG00000029998)
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00620000089286	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37
Rhinopithecus	ANCESTRAL SPECIES	118	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.i.a #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00620000089286	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37
Golden snub-nosed monkey	MODERN SPECIES	1733	ENSRROG00000040238	C5orf47 (ENSRROG00000008119) #7	NSG2 (ENSRROG00000032380)	CPEB4 (ENSRROG00000029196) #8	BOD1 (ENSRROG00000039526) #9	STC2 (ENSRROG00000030679) #10	NKX2-5 (ENSRROG00000043318) #11	BNIP1 (ENSRROG00000035092) #12	CREBRF (ENSRROG00000041689) #14	ATP6V0E1 (ENSRROG00000035355) #15	ENSRROG00000034464 #16	ERGIC1 (ENSRROG00000031072) #18	DUSP1 (ENSRROG00000027680) #19	NEURL1B (ENSRROG00000043630) #20	SH3PXD2B (ENSRROG00000038290) #21	UBTD2 (ENSRROG00000038688) #22	EFCAB9 (ENSRROG00000001287) #23	ENSRROG00000039795	STK10 (ENSRROG00000043810) #24	FBXW11 (ENSRROG00000042640) #25	SMIM23 (ENSRROG00000037550) #27	ENSRROG00000031061	FGF18 (ENSRROG00000044210) #28	NPM1 (ENSRROG00000045149) ##29	TLX3 (ENSRROG00000034639) #30	ENSRROG00000045696	RANBP17 (ENSRROG00000045173) #33
Black snub-nosed monkey	MODERN SPECIES	1977				ENSRBIG00000028275 #8	BOD1 (ENSRBIG00000027366) #9	STC2 (ENSRBIG00000042135) #10	NKX2-5 (ENSRBIG00000007305) #11	BNIP1 (ENSRBIG00000024422) #12	CREBRF (ENSRBIG00000041000) #14	ATP6V0E1 (ENSRBIG00000000223) #15	RPL26L1 (ENSRBIG00000029430) #16	ERGIC1 (ENSRBIG00000032953) #18	DUSP1 (ENSRBIG00000037066) #19	NEURL1B (ENSRBIG00000037294) #20	SH3PXD2B (ENSRBIG00000036914) #21	UBTD2 (ENSRBIG00000037359) #22	EFCAB9 (ENSRBIG00000031355) #23	ENSRBIG00000030762	STK10 (ENSRBIG00000037834) #24
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000159824.c	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00620000089286	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Vervet Monkey	MODERN SPECIES	15	MSX2 (ENSCSAG00000009496)	NSG2 (ENSCSAG00000009499)	C5orf47 (ENSCSAG00000009504) #7	CPEB4 (ENSCSAG00000009516) #8	BOD1 (ENSCSAG00000009522) #9	STC2 (ENSCSAG00000009529) #10	NKX2-5 (ENSCSAG00000009533) #11	BNIP1 (ENSCSAG00000009541) #12	CREBRF (ENSCSAG00000009545) #14	ATP6V0E1 (ENSCSAG00000009548) #15	ENSCSAG00000009551 ##16	ERGIC1 (ENSCSAG00000009579) #18	DUSP1 (ENSCSAG00000009591) #19	NEURL1B (ENSCSAG00000009597) #20	SH3PXD2B (ENSCSAG00000009606) #21	UBTD2 (ENSCSAG00000009612) #22	EFCAB9 (ENSCSAG00000009621) #23	STK10 (ENSCSAG00000009634) #24	FBXW11 (ENSCSAG00000009643) #25	SMIM23 (ENSCSAG00000009650) #27	ENSCSAG00000009657	FGF18 (ENSCSAG00000009667) #28	NPM1 (ENSCSAG00000009697) ##29	TLX3 (ENSCSAG00000009715) #30	ENSCSAG00000009726	RANBP17 (ENSCSAG00000009868) #33	GABRP (ENSCSAG00000009945) #34	KCNIP1 (ENSCSAG00000009958) #36	KCNMB1 (ENSCSAG00000009964) #35	LCP2 (ENSCSAG00000010046) #37	C5orf58 (ENSCSAG00000010070)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00620000089286	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Macaca	ANCESTRAL SPECIES	7	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.i.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00620000089286	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000159824.c	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00940000154979.s.b.b ##9	ENSGT00390000005989.a #10	ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.a	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00620000089286	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.a.a.a	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000062346	MSX2 (ENSMFAG00000056450)	ENSMFAG00000010780	NSG2 (ENSMFAG00000033258)	CPEB4 (ENSMFAG00000003075) #8	ENSMFAG00000003066 ##9	STC2 (ENSMFAG00000048596) #10	ENSMFAG00000060111	NKX2-5 (ENSMFAG00000034569) #11	BNIP1 (ENSMFAG00000037018) #12	CREBRF (ENSMFAG00000036600) #14	ATP6V0E1 (ENSMFAG00000045429) #15	ERGIC1 (ENSMFAG00000037788) #18	DUSP1 (ENSMFAG00000044045) #19	SH3PXD2B (ENSMFAG00000040954) #21	UBTD2 (ENSMFAG00000052150) #22	EFCAB9 (ENSMFAG00000043157) #23	ENSMFAG00000051726	STK10 (ENSMFAG00000033923) #24	ENSMFAG00000057552	ENSMFAG00000047803	FBXW11 (ENSMFAG00000039918) #25	SMIM23 (ENSMFAG00000039057) #27	ENSMFAG00000039380	FGF18 (ENSMFAG00000064381) #28	NPM1 (ENSMFAG00000043579) ##29	ENSMFAG00000062884	TLX3 (ENSMFAG00000048247) #30	RANBP17 (ENSMFAG00000034347) #33	GABRP (ENSMFAG00000003571) #34	KCNMB1 (ENSMFAG00000002422) #35
Rhesus	MODERN SPECIES	16	MSX2 (ENSMMUG00000004932)	NSG2 (ENSMMUG00000059444)	CPEB4 (ENSMMUG00000019926) #8	BOD1 (ENSMMUG00000013793) #9	ENSMMUG00000054693	STC2 (ENSMMUG00000014782) #10	ENSMMUG00000055739	NKX2-5 (ENSMMUG00000064883) #11	BNIP1 (ENSMMUG00000014607) #12	CREBRF (ENSMMUG00000005909) #14	ATP6V0E1 (ENSMMUG00000059290) #15	ERGIC1 (ENSMMUG00000003067) #18	DUSP1 (ENSMMUG00000059336) #19	NEURL1B (ENSMMUG00000008848) #20	SH3PXD2B (ENSMMUG00000010102) #21	UBTD2 (ENSMMUG00000052139) #22	EFCAB9 (ENSMMUG00000059414) #23	ENSMMUG00000057388	STK10 (ENSMMUG00000006811) #24	FBXW11 (ENSMMUG00000016008) #25	SMIM23 (ENSMMUG00000057889) #27	FGF18 (ENSMMUG00000019401) #28	NPM1 (ENSMMUG00000015781) ##29	ENSMMUG00000056310	TLX3 (ENSMMUG00000057846) #30	ENSMMUG00000059105	RANBP17 (ENSMMUG00000015840) #33	GABRP (ENSMMUG00000000570) #34	KCNIP1 (ENSMMUG00000009171) #36	KCNMB1 (ENSMMUG00000060800) #35	LCP2 (ENSMMUG00000014126) #37
Pig-tailed macaque	MODERN SPECIES	566	NSG2 (ENSMNEG00000030122)	C5orf47 (ENSMNEG00000036162) #7	CPEB4 (ENSMNEG00000034689) #8	BOD1 (ENSMNEG00000038516) #9	STC2 (ENSMNEG00000032109) #10	NKX2-5 (ENSMNEG00000016498) #11	BNIP1 (ENSMNEG00000033003) #12	CREBRF (ENSMNEG00000032133) #14	ATP6V0E1 (ENSMNEG00000036422) #15	RPL26L1 (ENSMNEG00000029899) #16	ERGIC1 (ENSMNEG00000031904) #18	DUSP1 (ENSMNEG00000043275) #19	NEURL1B (ENSMNEG00000044968) #20	SH3PXD2B (ENSMNEG00000036165) #21	ENSMNEG00000035122	UBTD2 (ENSMNEG00000031278) #22	EFCAB9 (ENSMNEG00000014910) #23	STK10 (ENSMNEG00000029184) #24	FBXW11 (ENSMNEG00000033472) #25	SMIM23 (ENSMNEG00000029674) #27	ENSMNEG00000044745	FGF18 (ENSMNEG00000039895) #28	NPM1 (ENSMNEG00000039074) ##29	TLX3 (ENSMNEG00000041964) #30	ENSMNEG00000024836	RANBP17 (ENSMNEG00000045556) #33	GABRP (ENSMNEG00000043880) #34	KCNMB1 (ENSMNEG00000038025) #35	KCNIP1 (ENSMNEG00000037144) #36	LCP2 (ENSMNEG00000039031) #37	C5orf58 (ENSMNEG00000045509)
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00620000089286	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Olive baboon	MODERN SPECIES	15	MSX2 (ENSPANG00000041175)	ENSPANG00000045766	ENSPANG00000019682	CPEB4 (ENSPANG00000009300) #8	BOD1 (ENSPANG00000005513) #9	STC2 (ENSPANG00000045597) #10	NKX2-5 (ENSPANG00000012362) #11	BNIP1 (ENSPANG00000003761) #12	CREBRF (ENSPANG00000013059) #14	ENSPANG00000011468 #15	RPL26L1 (ENSPANG00000012204) #16	ERGIC1 (ENSPANG00000023223) #18	ENSPANG00000049887 #19	NEURL1B (ENSPANG00000001624) #20	SH3PXD2B (ENSPANG00000013857) #21	UBTD2 (ENSPANG00000002422) #22	EFCAB9 (ENSPANG00000003762) #23	STK10 (ENSPANG00000009341) #24	FBXW11 (ENSPANG00000006849) #25	SMIM23 (ENSPANG00000003366) #27	FGF18 (ENSPANG00000017661) #28	NPM1 (ENSPANG00000000217) ##29	TLX3 (ENSPANG00000000216) #30	ENSPANG00000040245	RANBP17 (ENSPANG00000002592) #33	GABRP (ENSPANG00000013183) #34	KCNMB1 (ENSPANG00000008079) #35	KCNIP1 (ENSPANG00000005266) #36	LCP2 (ENSPANG00000008703) #37	C5orf58 (ENSPANG00000003590)	FOXI1 (ENSPANG00000035900)
Cercopithecinae_d	ANCESTRAL SPECIES	53	ENSGT00910000147916	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a.d #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00620000089286	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Sooty mangabey	MODERN SPECIES	597	ENSCATG00000011643	NSG2 (ENSCATG00000029990)	C5orf47 (ENSCATG00000012564) #7	CPEB4 (ENSCATG00000014550) #8	ENSCATG00000005639 #9	STC2 (ENSCATG00000030924) #10	NKX2-5 (ENSCATG00000031410) #11	BNIP1 (ENSCATG00000043162) #12	CREBRF (ENSCATG00000040516) #14	ATP6V0E1 (ENSCATG00000036579) #15	RPL26L1 (ENSCATG00000029601) #16	ERGIC1 (ENSCATG00000041026) #18	DUSP1 (ENSCATG00000027456) #19	NEURL1B (ENSCATG00000038257) #20	SH3PXD2B (ENSCATG00000043516) #21	UBTD2 (ENSCATG00000032931) #22	EFCAB9 (ENSCATG00000042923) #23	STK10 (ENSCATG00000036488) #24	FBXW11 (ENSCATG00000000142) #25	SMIM23 (ENSCATG00000031141) #27	ENSCATG00000040661	FGF18 (ENSCATG00000040646) #28	NPM1 (ENSCATG00000013107) ##29	TLX3 (ENSCATG00000039358) #30	ENSCATG00000027225	RANBP17 (ENSCATG00000011884) #33	GABRP (ENSCATG00000038559) #34	KCNMB1 (ENSCATG00000029648) #35	KCNIP1 (ENSCATG00000040305) #36	LCP2 (ENSCATG00000014913) #37	C5orf58 (ENSCATG00000034297)
Drill	MODERN SPECIES	960				ENSMLEG00000030320 ##9	STC2 (ENSMLEG00000026461) #10	NKX2-5 (ENSMLEG00000000339) #11	BNIP1 (ENSMLEG00000039126) #12	CREBRF (ENSMLEG00000000513) #14	ATP6V0E1 (ENSMLEG00000030149) #15	ENSMLEG00000037483 ##16	ERGIC1 (ENSMLEG00000029804) #18	ENSMLEG00000040155 #17	DUSP1 (ENSMLEG00000039172) #19	NEURL1B (ENSMLEG00000033205) #20	SH3PXD2B (ENSMLEG00000029587) #21	UBTD2 (ENSMLEG00000038379) #22	EFCAB9 (ENSMLEG00000038052) #23	STK10 (ENSMLEG00000041182) #24	FBXW11 (ENSMLEG00000035049) #25	SMIM23 (ENSMLEG00000042760) #27	ENSMLEG00000040662	FGF18 (ENSMLEG00000029867) #28	NPM1 (ENSMLEG00000030928) ##29	TLX3 (ENSMLEG00000041555) #30
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316
Gibbon	MODERN SPECIES	11	ENSNLEG00000033959	NSG2 (ENSNLEG00000000522)	C5orf47 (ENSNLEG00000027778) #7	CPEB4 (ENSNLEG00000000487) #8	BOD1 (ENSNLEG00000000476) #9	STC2 (ENSNLEG00000000463) #10	NKX2-5 (ENSNLEG00000000457) #11	BNIP1 (ENSNLEG00000000453) #12	ENSNLEG00000000442 #14	ENSNLEG00000030031 #15	ERGIC1 (ENSNLEG00000000407) #18	ENSNLEG00000033458 #17	DUSP1 (ENSNLEG00000035887) #19	ENSNLEG00000000392 #20	SH3PXD2B (ENSNLEG00000000384) #21	UBTD2 (ENSNLEG00000000381) #22	EFCAB9 (ENSNLEG00000000378) #23	STK10 (ENSNLEG00000000350) #24	ENSNLEG00000031400	FBXW11 (ENSNLEG00000000338) #25	ENSNLEG00000000336 #27	ENSNLEG00000000334 #28	NPM1 (ENSNLEG00000000304) ##29	TLX3 (ENSNLEG00000000302) #30	RANBP17 (ENSNLEG00000000281) #33	ENSNLEG00000032964 #32	GABRP (ENSNLEG00000000264) #34	KCNIP1 (ENSNLEG00000000256) #36	ENSNLEG00000030707	ENSNLEG00000018628	ENSNLEG00000005166 #35
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316
Orangutan	MODERN SPECIES	18	C5orf47 (ENSPPYG00000016059) #7	ENSPPYG00000031520 #8	ENSPPYG00000016057 #9	STC2 (ENSPPYG00000031955) #10	ENSPPYG00000039258 #11	BNIP1 (ENSPPYG00000016054) #12	CREBRF (ENSPPYG00000016053) #14	ATP6V0E1 (ENSPPYG00000039284) #15	ENSPPYG00000016051	RPL26L1 (ENSPPYG00000025929) #16	ERGIC1 (ENSPPYG00000016049) #18	DUSP1 (ENSPPYG00000016048) #19	ENSPPYG00000016047	NEURL1B (ENSPPYG00000016046) #20	SH3PXD2B (ENSPPYG00000016044) #21	UBTD2 (ENSPPYG00000040678) #22	EFCAB9 (ENSPPYG00000016042) #23	STK10 (ENSPPYG00000016041) #24	FBXW11 (ENSPPYG00000016040) #25	SMIM23 (ENSPPYG00000016039) #27	FGF18 (ENSPPYG00000016038) #28	NPM1 (ENSPPYG00000016037) ##29	TLX3 (ENSPPYG00000016036) #30	RANBP17 (ENSPPYG00000016035) #33	GABRP (ENSPPYG00000016147) #34	ENSPPYG00000034673	KCNMB1 (ENSPPYG00000016033) #35	KCNIP1 (ENSPPYG00000016034) #36	LCP2 (ENSPPYG00000016030) #37	ENSPPYG00000031742	FOXI1 (ENSPPYG00000031912)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000155723.b #32	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Gorilla	MODERN SPECIES	18	C5orf47 (ENSGGOG00000013448) #7	CPEB4 (ENSGGOG00000010097) #8	BOD1 (ENSGGOG00000010925) #9	STC2 (ENSGGOG00000013736) #10	NKX2-5 (ENSGGOG00000017092) #11	BNIP1 (ENSGGOG00000002239) #12	CREBRF (ENSGGOG00000011220) #14	ATP6V0E1 (ENSGGOG00000006701) #15	ENSGGOG00000038246	RPL26L1 (ENSGGOG00000025582) #16	ENSGGOG00000044004 #17	ERGIC1 (ENSGGOG00000008455) #18	DUSP1 (ENSGGOG00000007135) #19	ENSGGOG00000004882 #20	SH3PXD2B (ENSGGOG00000008765) #21	UBTD2 (ENSGGOG00000043610) #22	EFCAB9 (ENSGGOG00000011373) #23	STK10 (ENSGGOG00000012427) #24	FBXW11 (ENSGGOG00000007880) #25	SMIM23 (ENSGGOG00000004301) #27	FGF18 (ENSGGOG00000007226) #28	NPM1 (ENSGGOG00000007220) ##29	ENSGGOG00000023662 #30	ENSGGOG00000042599 #32	RANBP17 (ENSGGOG00000010374) #33	GABRP (ENSGGOG00000003834) #34	KCNMB1 (ENSGGOG00000007162) #35	KCNIP1 (ENSGGOG00000007280) #36	LCP2 (ENSGGOG00000006590) #37	ENSGGOG00000027265	FOXI1 (ENSGGOG00000015780)
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000155723.b #32	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Human	MODERN SPECIES	17	MSX2 (ENSG00000120149)	NSG2 (ENSG00000170091)	C5orf47 (ENSG00000185056) #7	CPEB4 (ENSG00000113742) #8	BOD1 (ENSG00000145919) #9	STC2 (ENSG00000113739) #10	NKX2-5 (ENSG00000183072) #11	BNIP1 (ENSG00000113734) #12	CREBRF (ENSG00000164463) #14	ATP6V0E1 (ENSG00000113732) #15	RPL26L1 (ENSG00000037241) #16	ERGIC1 (ENSG00000113719) #18	DUSP1 (ENSG00000120129) #19	NEURL1B (ENSG00000214357) #20	SH3PXD2B (ENSG00000174705) #21	UBTD2 (ENSG00000168246) #22	EFCAB9 (ENSG00000214360) #23	STK10 (ENSG00000072786) #24	FBXW11 (ENSG00000072803) #25	SMIM23 (ENSG00000185662) #27	FGF18 (ENSG00000156427) #28	NPM1 (ENSG00000181163) ##29	TLX3 (ENSG00000164438) #30	RANBP17 (ENSG00000204764) #33	GABRP (ENSG00000094755) #34	KCNMB1 (ENSG00000145936) #35	KCNIP1 (ENSG00000182132) #36	LCP2 (ENSG00000043462) #37	C5orf58 (ENSG00000234511)	FOXI1 (ENSG00000168269)	INSYN2B (ENSG00000204767)
Pan	ANCESTRAL SPECIES	10	ENSGT00940000154998.a.a #8	ENSGT00940000154979.s.a #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000155723.b #32	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585
Chimpanzee	MODERN SPECIES	18	CPEB4 (ENSPTRG00000017545) #8	BOD1 (ENSPTRG00000017544) #9	STC2 (ENSPTRG00000017543) #10	NKX2-5 (ENSPTRG00000017542) #11	BNIP1 (ENSPTRG00000017541) #12	CREBRF (ENSPTRG00000017540) #14	ATP6V0E1 (ENSPTRG00000017538) #15	ENSPTRG00000041040	RPL26L1 (ENSPTRG00000043990) #16	ENSPTRG00000046007 #17	ERGIC1 (ENSPTRG00000017535) #18	DUSP1 (ENSPTRG00000017534) #19	ENSPTRG00000046003	NEURL1B (ENSPTRG00000033712) #20	SH3PXD2B (ENSPTRG00000017531) #21	UBTD2 (ENSPTRG00000044878) #22	EFCAB9 (ENSPTRG00000034173) #23	ENSPTRG00000050304	STK10 (ENSPTRG00000017527) #24	FBXW11 (ENSPTRG00000017526) #25	SMIM23 (ENSPTRG00000017525) #27	FGF18 (ENSPTRG00000017524) #28	NPM1 (ENSPTRG00000049153) ##29	TLX3 (ENSPTRG00000017522) #30	ENSPTRG00000052692	ENSPTRG00000046140 #32	RANBP17 (ENSPTRG00000028506) #33	GABRP (ENSPTRG00000017520) #34	KCNMB1 (ENSPTRG00000017518) #35	KCNIP1 (ENSPTRG00000017519) #36	LCP2 (ENSPTRG00000017517) #37
Bonobo	MODERN SPECIES	18	CPEB4 (ENSPPAG00000030599) #8	BOD1 (ENSPPAG00000033401) #9	STC2 (ENSPPAG00000042436) #10	NKX2-5 (ENSPPAG00000031047) #11	BNIP1 (ENSPPAG00000029895) #12	CREBRF (ENSPPAG00000039864) #14	ATP6V0E1 (ENSPPAG00000037191) #15	ENSPPAG00000043282	RPL26L1 (ENSPPAG00000029664) #16	ENSPPAG00000036347 #17	ERGIC1 (ENSPPAG00000030828) #18	DUSP1 (ENSPPAG00000028299) #19	ENSPPAG00000030109	ENSPPAG00000014966 #20	SH3PXD2B (ENSPPAG00000028491) #21	UBTD2 (ENSPPAG00000040436) #22	EFCAB9 (ENSPPAG00000037845) #23	ENSPPAG00000041942	STK10 (ENSPPAG00000017062) #24	FBXW11 (ENSPPAG00000041177) #25	SMIM23 (ENSPPAG00000006847) #27	FGF18 (ENSPPAG00000043852) #28	NPM1 (ENSPPAG00000041884) ##29	TLX3 (ENSPPAG00000035866) #30	ENSPPAG00000041342 #32	RANBP17 (ENSPPAG00000041600) #33	GABRP (ENSPPAG00000016335) #34	KCNIP1 (ENSPPAG00000033996) #36	KCNMB1 (ENSPPAG00000038648) #35	LCP2 (ENSPPAG00000035616) #37	FOXI1 (ENSPPAG00000024818)
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	5382														EFNB2 (ENSTSYG00000014456)	ENSTSYG00000029951	ENSTSYG00000028850 #22	EFCAB9 (ENSTSYG00000008293) #23	STK10 (ENSTSYG00000006260) #24
Tarsier	MODERN SPECIES	107																ENSTSYG00000026922 #22
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Lemuriformes	ANCESTRAL SPECIES	70	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.a.a.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Mouse lemur	MODERN SPECIES	15	TMEM128 (ENSMICG00000042056)	LYAR (ENSMICG00000000202)	ZBTB49 (ENSMICG00000042304)	NSG1 (ENSMICG00000009553)	STX18 (ENSMICG00000009557)	MSX1 (ENSMICG00000043130)	ENSMICG00000044188	STK32B (ENSMICG00000047439)	EVC2 (ENSMICG00000010507)	EVC (ENSMICG00000010561)	ENSMICG00000032986	CRMP1 (ENSMICG00000005762)	C4orf50 (ENSMICG00000046962)	JAKMIP1 (ENSMICG00000002468)	SH3PXD2B (ENSMICG00000011279) #21	UBTD2 (ENSMICG00000037280) #22	EFCAB9 (ENSMICG00000041945) #23	ENSMICG00000038026	STK10 (ENSMICG00000004517) #24	ENSMICG00000004512 #25	ENSMICG00000029505	ENSMICG00000045663	FOXI1 (ENSMICG00000041455)	FGF18 (ENSMICG00000012403) #28	ENSMICG00000002717 ##29	TLX3 (ENSMICG00000045444) #30	ENSMICG00000033249	RANBP17 (ENSMICG00000027710) #33	GABRP (ENSMICG00000012635) #34	KCNMB1 (ENSMICG00000043676) #35	KCNIP1 (ENSMICG00000012622) #36
Lemuriformes_a	ANCESTRAL SPECIES	146			ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.a.a.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Coquerels sifaka	MODERN SPECIES	428	SPINK13 (ENSPCOG00000018652)	NSG2 (ENSPCOG00000019558)	CPEB4 (ENSPCOG00000004676) #8	ENSPCOG00000017551 #9	STC2 (ENSPCOG00000016688) #10	NKX2-5 (ENSPCOG00000019525) #11	BNIP1 (ENSPCOG00000018899) #12	CREBRF (ENSPCOG00000024235) #14	ATP6V0E1 (ENSPCOG00000022516) #15	RPL26L1 (ENSPCOG00000016409) #16	ERGIC1 (ENSPCOG00000014528) #18	DUSP1 (ENSPCOG00000025861) #19	NEURL1B (ENSPCOG00000025987) #20	SH3PXD2B (ENSPCOG00000021760) #21	ENSPCOG00000023430	UBTD2 (ENSPCOG00000014867) #22	EFCAB9 (ENSPCOG00000015386) #23	STK10 (ENSPCOG00000019111) #24	FBXW11 (ENSPCOG00000017113) #25	SMIM23 (ENSPCOG00000018006) #27	FGF18 (ENSPCOG00000028662) #28	ENSPCOG00000024038 ##29	TLX3 (ENSPCOG00000015947) #30	ENSPCOG00000015791	ENSPCOG00000007993 #33	GABRP (ENSPCOG00000017643) #34	KCNMB1 (ENSPCOG00000021448) #35	KCNIP1 (ENSPCOG00000015105) #36	LCP2 (ENSPCOG00000022747) #37	ENSPCOG00000012130	FOXI1 (ENSPCOG00000022931)
Greater bamboo lemur	MODERN SPECIES	635															ENSPSMG00000017278	UBTD2 (ENSPSMG00000017274) #22	EFCAB9 (ENSPSMG00000017273) #23	STK10 (ENSPSMG00000017263) #24	FBXW11 (ENSPSMG00000017174) #25	SMIM23 (ENSPSMG00000017034) #27	FGF18 (ENSPSMG00000017028) #28	ENSPSMG00000016994 ##29	TLX3 (ENSPSMG00000016978) #30	RANBP17 (ENSPSMG00000016972) #33	GABRP (ENSPSMG00000016887) #34	KCNMB1 (ENSPSMG00000016861) #35	KCNIP1 (ENSPSMG00000016848) #36	LCP2 (ENSPSMG00000016768) #37	C5orf58 (ENSPSMG00000016675)	FOXI1 (ENSPSMG00000016670)	INSYN2B (ENSPSMG00000016662)
Bushbaby	MODERN SPECIES	118	DRD1 (ENSOGAG00000000909)	MSX2 (ENSOGAG00000032139)	NSG2 (ENSOGAG00000010238)	CPEB4 (ENSOGAG00000004243) #8	ENSOGAG00000001107 #9	STC2 (ENSOGAG00000007539) #10	NKX2-5 (ENSOGAG00000030259) #11	BNIP1 (ENSOGAG00000007537) #12	ENSOGAG00000030210 #14	ATP6V0E1 (ENSOGAG00000017071) #15	ENSOGAG00000032228	ERGIC1 (ENSOGAG00000017066) #18	DUSP1 (ENSOGAG00000017064) #19	NEURL1B (ENSOGAG00000026783) #20	SH3PXD2B (ENSOGAG00000012721) #21	UBTD2 (ENSOGAG00000011997) #22	EFCAB9 (ENSOGAG00000033621) #23	STK10 (ENSOGAG00000011991) #24	FBXW11 (ENSOGAG00000011988) #25	SMIM23 (ENSOGAG00000025446) #27	ENSOGAG00000028434	FGF18 (ENSOGAG00000013617) #28	ENSOGAG00000013616 ##29	TLX3 (ENSOGAG00000029862) #30	RANBP17 (ENSOGAG00000013609) #33	ENSOGAG00000028828	GABRP (ENSOGAG00000013604) #34	KCNIP1 (ENSOGAG00000013599) #36	KCNMB1 (ENSOGAG00000016972) #35	LCP2 (ENSOGAG00000002810) #37	FOXI1 (ENSOGAG00000032689)
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Tree shrew	MODERN SPECIES	3912																UBTD2 (ENSTBEG00000001787) #22	STK10 (ENSTBEG00000001064) #24	FBXW11 (ENSTBEG00000009311) #25
Glires	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Lagomorpha	ANCESTRAL SPECIES	32	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.b.d ##29	ENSGT00940000153052.c.b.a.a.b.c.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Pika	MODERN SPECIES	4719															ENSOPRG00000013081 #21	ENSOPRG00000013077 #22	ENSOPRG00000018566 #23
Rabbit	MODERN SPECIES	14	MSX2 (ENSOCUG00000009161)	NSG2 (ENSOCUG00000038430)	CPEB4 (ENSOCUG00000008971) #8	ENSOCUG00000014283 #9	STC2 (ENSOCUG00000007985) #10	NKX2-5 (ENSOCUG00000000041) #11	BNIP1 (ENSOCUG00000000040) #12	CREBRF (ENSOCUG00000000038) #14	ATP6V0E1 (ENSOCUG00000006174) #15	RPL26L1 (ENSOCUG00000006172) #16	ERGIC1 (ENSOCUG00000029231) #18	DUSP1 (ENSOCUG00000007999) #19	NEURL1B (ENSOCUG00000027790) #20	SH3PXD2B (ENSOCUG00000006784) #21	ENSOCUG00000034187	UBTD2 (ENSOCUG00000005108) #22	EFCAB9 (ENSOCUG00000024250) #23	STK10 (ENSOCUG00000005098) #24	FBXW11 (ENSOCUG00000007739) #25	FGF18 (ENSOCUG00000011124) #28	ENSOCUG00000011117 ##29	TLX3 (ENSOCUG00000000918) #30	RANBP17 (ENSOCUG00000011100) #33	GABRP (ENSOCUG00000008191) #34	KCNMB1 (ENSOCUG00000000539) #35	KCNIP1 (ENSOCUG00000000540) #36	LCP2 (ENSOCUG00000000534) #37	C5orf58 (ENSOCUG00000030888)	FOXI1 (ENSOCUG00000000836)	INSYN2B (ENSOCUG00000000834)	ENSOCUG00000031547
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000167072	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.b.b.b.q ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Myomorpha	ANCESTRAL SPECIES	28		ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.b.b.b.q ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Muroidea	ANCESTRAL SPECIES	10	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.b.b.b.q ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d.d.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d.d.b.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	15	Parn (ENSMOCG00000022211)	Bfar (ENSMOCG00000015581)	Pla2g10 (ENSMOCG00000005669)	Rrn3 (ENSMOCG00000016697)	Ntan1 (ENSMOCG00000022646)	ENSMOCG00000016638	Mpv17l (ENSMOCG00000016475)	Bmerb1 (ENSMOCG00000018990)	ENSMOCG00000022220	Marf1 (ENSMOCG00000001136)	Nde1 (ENSMOCG00000004322)	Myh11 (ENSMOCG00000001351)	Cep20 (ENSMOCG00000002426)	Abcc1 (ENSMOCG00000001674)	ENSMOCG00000022493 #21	ENSMOCG00000022075 #22	Efcab9 (ENSMOCG00000022547) #23	ENSMOCG00000022759 #24	Fbxw11 (ENSMOCG00000005139) #25	Smim23 (ENSMOCG00000008049) #27	Fgf18 (ENSMOCG00000010978) #28	ENSMOCG00000001485 ##29	Tlx3 (ENSMOCG00000013764) #30	Ranbp17 (ENSMOCG00000007105) #33	Gabrp (ENSMOCG00000022600) #34	Kcnip1 (ENSMOCG00000019706) #36	Kcnmb1 (ENSMOCG00000012254) #35	Lcp2 (ENSMOCG00000012783) #37	Foxi1 (ENSMOCG00000004587)	Dock2 (ENSMOCG00000007487)	Insyn2b (ENSMOCG00000022544)
Prairie vole	MODERN SPECIES		Lrr1 (ENSMOCG00000018456)	Rps29 (ENSMOCG00000017681)	Mdga2 (ENSMOCG00000022499)	ENSMOCG00000005109	Rpl10l (ENSMOCG00000009910)	Mis18bp1 (ENSMOCG00000017171)	Fancm (ENSMOCG00000008775)	Fkbp3 (ENSMOCG00000011130)	Prpf39 (ENSMOCG00000009148)	Togaram1 (ENSMOCG00000021755)	Klhl28 (ENSMOCG00000006562)	Gm527 (ENSMOCG00000005543)	ENSMOCG00000015843	Lrfn5 (ENSMOCG00000021045)	ENSMOCG00000014206	ENSMOCG00000013030 #22
Northern American deer mouse	MODERN SPECIES	21	Il9r (ENSPEMG00000015108)	Nsg2 (ENSPEMG00000029190)	4930524B15Rik (ENSPEMG00000016302) #7	Cpeb4 (ENSPEMG00000025728) #8	ENSPEMG00000030821 #9	Stc2 (ENSPEMG00000031170) #10	Nkx2-5 (ENSPEMG00000012263) #11	Bnip1 (ENSPEMG00000014579) #12	Crebrf (ENSPEMG00000019136) #14	Atp6v0e (ENSPEMG00000016171) #15	Ergic1 (ENSPEMG00000011371) #18	ENSPEMG00000029256	Dusp1 (ENSPEMG00000008974) #19	Neurl1b (ENSPEMG00000018647) #20	Sh3pxd2b (ENSPEMG00000011209) #21	Ubtd2 (ENSPEMG00000028774) #22	Efcab9 (ENSPEMG00000012516) #23	Stk10 (ENSPEMG00000016749) #24	Fbxw11 (ENSPEMG00000014614) #25	Smim23 (ENSPEMG00000009648) #27	ENSPEMG00000005862	Fgf18 (ENSPEMG00000027707) #28	ENSPEMG00000010032 ##29	Tlx3 (ENSPEMG00000009002) #30	Ranbp17 (ENSPEMG00000013086) #33	Gabrp (ENSPEMG00000008255) #34	Kcnip1 (ENSPEMG00000007681) #36	Kcnmb1 (ENSPEMG00000025688) #35	Lcp2 (ENSPEMG00000011935) #37	4930469K13Rik (ENSPEMG00000029094)	Foxi1 (ENSPEMG00000015123)
Cricetinae	ANCESTRAL SPECIES		ENSGT00510000049125	ENSGT00940000167072	ENSGT00640000091672 #7	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d.d.a.a.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Chinese hamster chok1gshd	MODERN SPECIES	229	Nsg2 (ENSCGRG00001010888)	ENSCGRG00001013841	4930524B15Rik (ENSCGRG00001017897) #7	ENSCGRG00001019946	Cpeb4 (ENSCGRG00001021805) #8	Bod1 (ENSCGRG00001023221) #9	Stc2 (ENSCGRG00001023337) #10	Nkx2-5 (ENSCGRG00001024735) #11	Bnip1 (ENSCGRG00001000805) #12	Crebrf (ENSCGRG00001007231) #14	Atp6v0e (ENSCGRG00001022946) #15	Ergic1 (ENSCGRG00001024104) #18	Dusp1 (ENSCGRG00001019246) #19	Neurl1b (ENSCGRG00001022855) #20	Sh3pxd2b (ENSCGRG00001010764) #21	Ubtd2 (ENSCGRG00001022026) #22	Efcab9 (ENSCGRG00001001253) #23	Stk10 (ENSCGRG00001013751) #24	Fbxw11 (ENSCGRG00001016029) #25	Smim23 (ENSCGRG00001015541) #27	Fgf18 (ENSCGRG00001017188) #28	ENSCGRG00001001985 ##29	Tlx3 (ENSCGRG00001015510) #30	Ranbp17 (ENSCGRG00001015450) #33	ENSCGRG00001012148	Gabrp (ENSCGRG00001018465) #34	Kcnip1 (ENSCGRG00001012407) #36	Kcnmb1 (ENSCGRG00001013776) #35	Lcp2 (ENSCGRG00001017371) #37	Foxi1 (ENSCGRG00001018922)	ENSCGRG00001024778
Golden Hamster	MODERN SPECIES	861							Stc2 (ENSMAUG00000008254) #10	Nkx2-5 (ENSMAUG00000007694) #11	Bnip1 (ENSMAUG00000016525) #12	Crebrf (ENSMAUG00000016495) #14	Atp6v0e (ENSMAUG00000013929) #15	Ergic1 (ENSMAUG00000019097) #18	Dusp1 (ENSMAUG00000008804) #19	Neurl1b (ENSMAUG00000009175) #20	ENSMAUG00000001948 #21	Ubtd2 (ENSMAUG00000000209) #22	Efcab9 (ENSMAUG00000012647) #23
Murinae	ANCESTRAL SPECIES	7	ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Mus	ANCESTRAL SPECIES	2		ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00640000091672 #7	ENSGT00390000000483.a.a	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00970000195169	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000159080	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00640000091672 #7	ENSGT00390000000483.a.a	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00970000195169	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00640000091672 #7	ENSGT00390000000483.a.a	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000162598.c	ENSGT00940000154590	ENSGT00940000162598.d	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00640000091672 #7	ENSGT00390000000483.a.a	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000162598.c	ENSGT00940000154590	ENSGT00940000162598.d	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.d.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT01060000252083	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316
Steppe mouse	MODERN SPECIES	3235	ENSMSIG00000024561 #9	Cpeb4 (ENSMSIG00000024456) #8	ENSMSIG00000024450	4930524B15Rik (ENSMSIG00000024432) #7	ENSMSIG00000024413	Il9r (ENSMSIG00000024354)	ENSMSIG00000024344	Rhbdf1 (ENSMSIG00000024323)	Mpg (ENSMSIG00000024316)	Nprl3 (ENSMSIG00000024256)	Hba-x (ENSMSIG00000024240)	ENSMSIG00000024228	ENSMSIG00000024204	Hbq1a (ENSMSIG00000023834)	Sh3pxd2b (ENSMSIG00000023801) #21	Ubtd2 (ENSMSIG00000023792) #22	Efcab9 (ENSMSIG00000023781) #23	Stk10 (ENSMSIG00000023716) #24	Fbxw11 (ENSMSIG00000023614) #25	Smim23 (ENSMSIG00000023592) #27	Fgf18 (ENSMSIG00000023572) #28	Npm1 (ENSMSIG00000023445) ##29	Tlx3 (ENSMSIG00000023425) #30	ENSMSIG00000023419	Ranbp17 (ENSMSIG00000023281) #33	Gabrp (ENSMSIG00000023250) #34	ENSMSIG00000023232	Kcnip1 (ENSMSIG00000023156) #36	Kcnmb1 (ENSMSIG00000023135) #35	ENSMSIG00000022989 #37	4930469K13Rik (ENSMSIG00000022972)
spretus	MODERN SPECIES	2	Erlec1 (MGP_SPRETEiJ_G0017012)	Chac2 (MGP_SPRETEiJ_G0017013)	Stc2 (MGP_SPRETEiJ_G0017014) #10	Bod1 (MGP_SPRETEiJ_G0017015) #9	Cpeb4 (MGP_SPRETEiJ_G0017016) #8	4930524B15Rik (MGP_SPRETEiJ_G0017017) #7	Nsg2 (MGP_SPRETEiJ_G0017018)	MGP_SPRETEiJ_G0017019	Il9r (MGP_SPRETEiJ_G0017020)	MGP_SPRETEiJ_G0017021	Rhbdf1 (MGP_SPRETEiJ_G0017022)	Nprl3 (MGP_SPRETEiJ_G0017023)	Mpg (MGP_SPRETEiJ_G0017024)	MGP_SPRETEiJ_G0017025	Sh3pxd2b (MGP_SPRETEiJ_G0017026) #21	Ubtd2 (MGP_SPRETEiJ_G0017027) #22	Efcab9 (MGP_SPRETEiJ_G0017028) #23	Stk10 (MGP_SPRETEiJ_G0017029) #24	Fbxw11 (MGP_SPRETEiJ_G0017030) #25	Smim23 (MGP_SPRETEiJ_G0017031) #27	Fgf18 (MGP_SPRETEiJ_G0017032) #28	Npm1 (MGP_SPRETEiJ_G0017033) ##29	Tlx3 (MGP_SPRETEiJ_G0017034) #30	MGP_SPRETEiJ_G0017035 #33	MGP_SPRETEiJ_G0017036	Gabrp (MGP_SPRETEiJ_G0017037) #34	MGP_SPRETEiJ_G0017038	Kcnip1 (MGP_SPRETEiJ_G0017039) #36	Kcnmb1 (MGP_SPRETEiJ_G0017040) #35	Lcp2 (MGP_SPRETEiJ_G0017041) #37	Foxi1 (MGP_SPRETEiJ_G0017042)
Mouse	MODERN SPECIES	2	Bod1 (ENSMUSG00000044502) #9	Cpeb4 (ENSMUSG00000020300) #8	4930524B15Rik (ENSMUSG00000020299) #7	Nsg2 (ENSMUSG00000020297)	Il9r (ENSMUSG00000020279)	Snrnp25 (ENSMUSG00000040767)	Rhbdf1 (ENSMUSG00000020282)	Nprl3 (ENSMUSG00000020289)	Mpg (ENSMUSG00000020287)	Hba-x (ENSMUSG00000055609)	Hba-a1 (ENSMUSG00000069919)	Hbq1b (ENSMUSG00000073063)	Hba-a2 (ENSMUSG00000069917)	Hbq1a (ENSMUSG00000020295)	Sh3pxd2b (ENSMUSG00000040711) #21	Ubtd2 (ENSMUSG00000044949) #22	Efcab9 (ENSMUSG00000044056) #23	Stk10 (ENSMUSG00000020272) #24	Fbxw11 (ENSMUSG00000020271) #25	Smim23 (ENSMUSG00000020270) #27	Fgf18 (ENSMUSG00000057967) #28	Npm1 (ENSMUSG00000057113) ##29	Tlx3 (ENSMUSG00000040610) #30	Ranbp17 (ENSMUSG00000040594) #33	Gabrp (ENSMUSG00000020159) #34	Kcnip1 (ENSMUSG00000053519) #36	Kcnmb1 (ENSMUSG00000020155) #35	4930469K13Rik (ENSMUSG00000085684)	Lcp2 (ENSMUSG00000002699) #37	Foxi1 (ENSMUSG00000047861)	Dock2 (ENSMUSG00000020143)
Ryukyu mouse	MODERN SPECIES	2	Bod1 (MGP_CAROLIEiJ_G0016171) #9	Cpeb4 (MGP_CAROLIEiJ_G0016172) #8	4930524B15Rik (MGP_CAROLIEiJ_G0016173) #7	Nsg2 (MGP_CAROLIEiJ_G0016174)	Il9r (MGP_CAROLIEiJ_G0016175)	MGP_CAROLIEiJ_G0016176	Rhbdf1 (MGP_CAROLIEiJ_G0016177)	Nprl3 (MGP_CAROLIEiJ_G0016178)	Mpg (MGP_CAROLIEiJ_G0016179)	MGP_CAROLIEiJ_G0016180	MGP_CAROLIEiJ_G0016181	MGP_CAROLIEiJ_G0016182	MGP_CAROLIEiJ_G0016183	MGP_CAROLIEiJ_G0016184	Sh3pxd2b (MGP_CAROLIEiJ_G0016185) #21	Ubtd2 (MGP_CAROLIEiJ_G0016186) #22	Efcab9 (MGP_CAROLIEiJ_G0016187) #23	Stk10 (MGP_CAROLIEiJ_G0016188) #24	Fbxw11 (MGP_CAROLIEiJ_G0016189) #25	Smim23 (MGP_CAROLIEiJ_G0016190) #27	Fgf18 (MGP_CAROLIEiJ_G0016191) #28	Npm1 (MGP_CAROLIEiJ_G0016192) ##29	Tlx3 (MGP_CAROLIEiJ_G0016193) #30	Ranbp17 (MGP_CAROLIEiJ_G0016194) #33	MGP_CAROLIEiJ_G0016195	Gabrp (MGP_CAROLIEiJ_G0016196) #34	MGP_CAROLIEiJ_G0016197	Kcnip1 (MGP_CAROLIEiJ_G0016198) #36	Kcnmb1 (MGP_CAROLIEiJ_G0016199) #35	Lcp2 (MGP_CAROLIEiJ_G0016200) #37	Foxi1 (MGP_CAROLIEiJ_G0016201)
Shrew mouse	MODERN SPECIES	5	Cpeb4 (MGP_PahariEiJ_G0017307) #8	4930524B15Rik (MGP_PahariEiJ_G0017308) #7	Nsg2 (MGP_PahariEiJ_G0017309)	MGP_PahariEiJ_G0017310	Il9r (MGP_PahariEiJ_G0017311)	MGP_PahariEiJ_G0017312	Rhbdf1 (MGP_PahariEiJ_G0017313)	Nprl3 (MGP_PahariEiJ_G0017314)	MGP_PahariEiJ_G0017315	MGP_PahariEiJ_G0017316	MGP_PahariEiJ_G0017317	MGP_PahariEiJ_G0017318	MGP_PahariEiJ_G0017319	MGP_PahariEiJ_G0017320	Sh3pxd2b (MGP_PahariEiJ_G0017321) #21	Ubtd2 (MGP_PahariEiJ_G0017322) #22	Efcab9 (MGP_PahariEiJ_G0017323) #23	Stk10 (MGP_PahariEiJ_G0017324) #24	Fbxw11 (MGP_PahariEiJ_G0017325) #25	Smim23 (MGP_PahariEiJ_G0017326) #27	Fgf18 (MGP_PahariEiJ_G0017327) #28	MGP_PahariEiJ_G0017328 ##29	Tlx3 (MGP_PahariEiJ_G0017329) #30	Ranbp17 (MGP_PahariEiJ_G0017330) #33	MGP_PahariEiJ_G0017331	Gabrp (MGP_PahariEiJ_G0017332) #34	MGP_PahariEiJ_G0017333	MGP_PahariEiJ_G0017334 #36	Kcnmb1 (MGP_PahariEiJ_G0017335) #35	Lcp2 (MGP_PahariEiJ_G0017336) #37	Foxi1 (MGP_PahariEiJ_G0017337)
Rat	MODERN SPECIES	1	Snrnp25 (ENSRNOG00000020626)	Il9r (ENSRNOG00000020630)	Nsg2 (ENSRNOG00000020644)	RGD1311343 (ENSRNOG00000027852) #7	Cpeb4 (ENSRNOG00000033169) #8	Bod1 (ENSRNOG00000020717) #9	Stc2 (ENSRNOG00000020729) #10	Nkx2-5 (ENSRNOG00000020747) #11	Bnip1 (ENSRNOG00000020753) #12	Crebrf (ENSRNOG00000020769) #14	Atp6v0e1 (ENSRNOG00000003269) #15	Ergic1 (ENSRNOG00000003508) #18	ENSRNOG00000069024 #19	Neurl1b (ENSRNOG00000027606) #20	Sh3pxd2b (ENSRNOG00000004063) #21	Ubtd2 (ENSRNOG00000004137) #22	Efcab9 (ENSRNOG00000004142) #23	Stk10 (ENSRNOG00000004217) #24	ENSRNOG00000066039	Fbxw11 (ENSRNOG00000004395) #25	Smim23 (ENSRNOG00000027196) #27	Fgf18 (ENSRNOG00000048389) #28	Npm1 (ENSRNOG00000004616) ##29	Tlx3 (ENSRNOG00000004976) #30	Ranbp17 (ENSRNOG00000005042) #33	Gabrp (ENSRNOG00000032417) #34	Kcnip1 (ENSRNOG00000005365) #36	AABR07029262.1 (ENSRNOG00000029706)	Kcnmb1 (ENSRNOG00000005465) #35	Lcp2 (ENSRNOG00000005620) #37	C10H5orf58 (ENSRNOG00000068310)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1546	Nsg2 (ENSNGAG00000013688)	4930524B15Rik (ENSNGAG00000012324) #7	Cpeb4 (ENSNGAG00000010735) #8	Bod1 (ENSNGAG00000006127) #9	ENSNGAG00000003484	Stc2 (ENSNGAG00000016574) #10	Nkx2-5 (ENSNGAG00000016164) #11	Bnip1 (ENSNGAG00000019475) #12	ENSNGAG00000009349 #14	ENSNGAG00000003294 #15	ENSNGAG00000002828 ##16	Ergic1 (ENSNGAG00000020608) #18	Dusp1 (ENSNGAG00000019520) #19	Neurl1b (ENSNGAG00000018472) #20	Sh3pxd2b (ENSNGAG00000000827) #21	Ubtd2 (ENSNGAG00000000104) #22	Efcab9 (ENSNGAG00000019506) #23	Stk10 (ENSNGAG00000019942) #24	Fbxw11 (ENSNGAG00000006880) #25	Smim23 (ENSNGAG00000001372) #27	Fgf18 (ENSNGAG00000001054) #28	ENSNGAG00000016679 ##29	Tlx3 (ENSNGAG00000011712) #30	Ranbp17 (ENSNGAG00000014221) #33	Gabrp (ENSNGAG00000017036) #34	Kcnip1 (ENSNGAG00000010312) #36	Kcnmb1 (ENSNGAG00000005867) #35	Lcp2 (ENSNGAG00000008561) #37	Foxi1 (ENSNGAG00000019108)	Insyn2b (ENSNGAG00000014504)
Lesser Egyptian jerboa	MODERN SPECIES	116	Drd1 (ENSJJAG00000014282)	Dusp1 (ENSJJAG00000010442) #19	Ergic1 (ENSJJAG00000006842) #18	ENSJJAG00000017961 #15	ENSJJAG00000017400 #14	ENSJJAG00000016719 #14	ENSJJAG00000016444 #12	Nkx2-5 (ENSJJAG00000015156) #11	Stc2 (ENSJJAG00000012335) #10	Bod1 (ENSJJAG00000007832) #9	Cpeb4 (ENSJJAG00000021518) #8	Nsg2 (ENSJJAG00000020822)	Msx2 (ENSJJAG00000016806)	Neurl1b (ENSJJAG00000016269) #20	Sh3pxd2b (ENSJJAG00000013982) #21	Ubtd2 (ENSJJAG00000010668) #22	Efcab9 (ENSJJAG00000009458) #23	Stk10 (ENSJJAG00000023041) #24	ENSJJAG00000021804 #25	Smim23 (ENSJJAG00000017456) #27	Fgf18 (ENSJJAG00000016780) #28	ENSJJAG00000014455 ##29	Tlx3 (ENSJJAG00000010676) #30	Ranbp17 (ENSJJAG00000004292) #33	Gabrp (ENSJJAG00000024063) #34	Kcnip1 (ENSJJAG00000022582) #36	Kcnmb1 (ENSJJAG00000019472) #35	Lcp2 (ENSJJAG00000007933) #37	Foxi1 (ENSJJAG00000022048)
Kangaroo rat	MODERN SPECIES	431															Sh3pxd2b (ENSDORG00000003937) #21	Ubtd2 (ENSDORG00000026096) #22	Efcab9 (ENSDORG00000010658) #23	Stk10 (ENSDORG00000009303) #24	Fbxw11 (ENSDORG00000009769) #25	ENSDORG00000026619	Fgf18 (ENSDORG00000025835) #28	ENSDORG00000028337 ##29	Ranbp17 (ENSDORG00000001411) #33	Gabrp (ENSDORG00000012082) #34	Kcnip1 (ENSDORG00000008211) #36	Kcnmb1 (ENSDORG00000023698) #35	ENSDORG00000016444 #37	Dock2 (ENSDORG00000006519)	Insyn2b (ENSDORG00000026025)	Spdl1 (ENSDORG00000006325)	Slit3 (ENSDORG00000024863)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Sciuridae	ANCESTRAL SPECIES	33	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.b.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Marmotini	ANCESTRAL SPECIES	38	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.b.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00390000010491.f.b	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316
Alpin marmot	MODERN SPECIES	31	SFXN1 (ENSMMMG00000009889)	DRD1 (ENSMMMG00000009915)	MSX2 (ENSMMMG00000009968)	NSG2 (ENSMMMG00000009989)	CPEB4 (ENSMMMG00000010044) #8	ENSMMMG00000010091 #9	STC2 (ENSMMMG00000010105) #10	NKX2-5 (ENSMMMG00000010122) #11	BNIP1 (ENSMMMG00000010131) #12	CREBRF (ENSMMMG00000010165) #14	RPL26L1 (ENSMMMG00000010196) #16	ERGIC1 (ENSMMMG00000010202) #18	ENSMMMG00000010217 #19	NEURL1B (ENSMMMG00000010222) #20	SH3PXD2B (ENSMMMG00000010235) #21	UBTD2 (ENSMMMG00000010264) #22	ENSMMMG00000010272 #23	STK10 (ENSMMMG00000010286) #24	FBXW11 (ENSMMMG00000010309) #25	SMIM23 (ENSMMMG00000010399) #27	ENSMMMG00000010418 #28	ENSMMMG00000010435 ##29	TLX3 (ENSMMMG00000010459) #30	RANBP17 (ENSMMMG00000010468) #33	GABRP (ENSMMMG00000010504) #34	KCNIP1 (ENSMMMG00000010524) #36	ENSMMMG00000010588	KCNMB1 (ENSMMMG00000010599) #35	LCP2 (ENSMMMG00000010608) #37	C5orf58 (ENSMMMG00000010701)	FOXI1 (ENSMMMG00000010708)
Marmotini_b	ANCESTRAL SPECIES	127	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.b.b.b.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00390000010491.f.b	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316
Squirrel	MODERN SPECIES	209	DRD1 (ENSSTOG00000029229)	MSX2 (ENSSTOG00000000399)	NSG2 (ENSSTOG00000011148)	CPEB4 (ENSSTOG00000020645) #8	ENSSTOG00000030887 #9	STC2 (ENSSTOG00000004413) #10	NKX2-5 (ENSSTOG00000004407) #11	BNIP1 (ENSSTOG00000004393) #12	CREBRF (ENSSTOG00000004368) #14	ATP6V0E1 (ENSSTOG00000025255) #15	RPL26L1 (ENSSTOG00000026876) #16	ERGIC1 (ENSSTOG00000025246) #18	DUSP1 (ENSSTOG00000023698) #19	NEURL1B (ENSSTOG00000025420) #20	SH3PXD2B (ENSSTOG00000028124) #21	UBTD2 (ENSSTOG00000014298) #22	EFCAB9 (ENSSTOG00000020218) #23	STK10 (ENSSTOG00000026208) #24	FBXW11 (ENSSTOG00000023506) #25	SMIM23 (ENSSTOG00000024706) #27	FGF18 (ENSSTOG00000023666) #28	ENSSTOG00000014732 ##29	TLX3 (ENSSTOG00000026927) #30	RANBP17 (ENSSTOG00000014700) #33	ENSSTOG00000014692 #34	KCNIP1 (ENSSTOG00000004193) #36	KCNMB1 (ENSSTOG00000021835) #35	LCP2 (ENSSTOG00000016525) #37	FOXI1 (ENSSTOG00000016524)	DOCK2 (ENSSTOG00000028655)	INSYN2B (ENSSTOG00000016521)
Arctic ground squirrel	MODERN SPECIES	242							STC2 (ENSUPAG00010022254) #10	NKX2-5 (ENSUPAG00010022252) #11	BNIP1 (ENSUPAG00010022250) #12	CREBRF (ENSUPAG00010022247) #14	ATP6V0E1 (ENSUPAG00010022244) #15	RPL26L1 (ENSUPAG00010022239) #16	ERGIC1 (ENSUPAG00010022238) #18	NEURL1B (ENSUPAG00010022219) #20	SH3PXD2B (ENSUPAG00010022216) #21	UBTD2 (ENSUPAG00010022213) #22	EFCAB9 (ENSUPAG00010022210) #23	STK10 (ENSUPAG00010022207) #24	ENSUPAG00010022184 #25	SMIM23 (ENSUPAG00010022182) #27	FGF18 (ENSUPAG00010022179) #28	NPM1 (ENSUPAG00010022177) ##29	TLX3 (ENSUPAG00010022175) #30	RANBP17 (ENSUPAG00010022169) #33	GABRP (ENSUPAG00010022164) #34	KCNIP1 (ENSUPAG00010022160) #36	ENSUPAG00010022158	KCNMB1 (ENSUPAG00010022156) #35	LCP2 (ENSUPAG00010022148) #37	C5orf58 (ENSUPAG00010022147)	FOXI1 (ENSUPAG00010022146)
Eurasian red squirrel	MODERN SPECIES	15	MSX2 (ENSSVLG00005012101)	NSG2 (ENSSVLG00005012146)	C5orf47 (ENSSVLG00005012218) #7	CPEB4 (ENSSVLG00005012332) #8	ENSSVLG00005012611 #9	STC2 (ENSSVLG00005012797) #10	NKX2-5 (ENSSVLG00005012867) #11	BNIP1 (ENSSVLG00005012932) #12	CREBRF (ENSSVLG00005013005) #14	ATP6V0E1 (ENSSVLG00005013162) #15	RPL26L1 (ENSSVLG00005013228) #16	ERGIC1 (ENSSVLG00005013430) #18	DUSP1 (ENSSVLG00005013587) #19	NEURL1B (ENSSVLG00005013785) #20	SH3PXD2B (ENSSVLG00005013894) #21	UBTD2 (ENSSVLG00005013934) #22	EFCAB9 (ENSSVLG00005013993) #23	STK10 (ENSSVLG00005014068) #24	FBXW11 (ENSSVLG00005014207) #25	FGF18 (ENSSVLG00005014519) #28	ENSSVLG00005014590 ##29	TLX3 (ENSSVLG00005014955) #30	RANBP17 (ENSSVLG00005015018) #33	GABRP (ENSSVLG00005015323) #34	KCNIP1 (ENSSVLG00005015593) #36	KCNMB1 (ENSSVLG00005015902) #35	LCP2 (ENSSVLG00005015956) #37	C5orf58 (ENSSVLG00005016377)	FOXI1 (ENSSVLG00005016401)	DOCK2 (ENSSVLG00005016455)	INSYN2B (ENSSVLG00005016909)
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Hystricomorpha_a	ANCESTRAL SPECIES	28	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Guinea pig	MODERN SPECIES	17	DRD1 (ENSCPOG00000039492)	MSX2 (ENSCPOG00000038944)	NSG2 (ENSCPOG00000037038)	CPEB4 (ENSCPOG00000015530) #8	ENSCPOG00000026033 #9	STC2 (ENSCPOG00000034039) #10	NKX2-5 (ENSCPOG00000026347) #11	BNIP1 (ENSCPOG00000006752) #12	CREBRF (ENSCPOG00000014384) #14	ATP6V0E1 (ENSCPOG00000040227) #15	RPL26L1 (ENSCPOG00000012188) #16	ERGIC1 (ENSCPOG00000012183) #18	DUSP1 (ENSCPOG00000013344) #19	NEURL1B (ENSCPOG00000040777) #20	SH3PXD2B (ENSCPOG00000039072) #21	UBTD2 (ENSCPOG00000034425) #22	EFCAB9 (ENSCPOG00000026758) #23	STK10 (ENSCPOG00000006502) #24	FBXW11 (ENSCPOG00000009582) #25	SMIM23 (ENSCPOG00000006672) #27	FGF18 (ENSCPOG00000006088) #28	TLX3 (ENSCPOG00000024190) #30	ENSCPOG00000032195	RANBP17 (ENSCPOG00000005628) #33	GABRP (ENSCPOG00000039299) #34	KCNIP1 (ENSCPOG00000014295) #36	KCNMB1 (ENSCPOG00000036105) #35	LCP2 (ENSCPOG00000002851) #37	FOXI1 (ENSCPOG00000019611)	INSYN2B (ENSCPOG00000010850)	DOCK2 (ENSCPOG00000010822)
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Long-tailed chinchilla	MODERN SPECIES	115	MSX2 (ENSCLAG00000014001)	NSG2 (ENSCLAG00000014316)	CPEB4 (ENSCLAG00000013156) #8	ENSCLAG00000016125 #9	ENSCLAG00000014408	STC2 (ENSCLAG00000013045) #10	NKX2-5 (ENSCLAG00000013992) #11	BNIP1 (ENSCLAG00000015919) #12	CREBRF (ENSCLAG00000014588) #14	ATP6V0E1 (ENSCLAG00000014664) #15	RPL26L1 (ENSCLAG00000014524) #16	ERGIC1 (ENSCLAG00000014304) #18	DUSP1 (ENSCLAG00000013473) #19	NEURL1B (ENSCLAG00000014210) #20	SH3PXD2B (ENSCLAG00000015389) #21	UBTD2 (ENSCLAG00000015134) #22	EFCAB9 (ENSCLAG00000013040) #23	STK10 (ENSCLAG00000015147) #24	FBXW11 (ENSCLAG00000013691) #25	SMIM23 (ENSCLAG00000012177) #27	FGF18 (ENSCLAG00000013051) #28	ENSCLAG00000014392 ##29	TLX3 (ENSCLAG00000013094) #30	RANBP17 (ENSCLAG00000013185) #33	GABRP (ENSCLAG00000012510) #34	KCNIP1 (ENSCLAG00000013854) #36	KCNMB1 (ENSCLAG00000014418) #35	LCP2 (ENSCLAG00000015940) #37	FOXI1 (ENSCLAG00000014060)	INSYN2B (ENSCLAG00000013576)	DOCK2 (ENSCLAG00000014012)
Degu	MODERN SPECIES	253	NSG2 (ENSODEG00000001862)	CPEB4 (ENSODEG00000001934) #8	ENSODEG00000001973 #9	ENSODEG00000002042	ENSODEG00000018739	STC2 (ENSODEG00000002102) #10	NKX2-5 (ENSODEG00000002184) #11	BNIP1 (ENSODEG00000002196) #12	CREBRF (ENSODEG00000002364) #14	ATP6V0E1 (ENSODEG00000001083) #15	ERGIC1 (ENSODEG00000001101) #18	DUSP1 (ENSODEG00000001126) #19	NEURL1B (ENSODEG00000001134) #20	ENSODEG00000001166	SH3PXD2B (ENSODEG00000001294) #21	UBTD2 (ENSODEG00000001390) #22	EFCAB9 (ENSODEG00000001416) #23	STK10 (ENSODEG00000001477) #24	FBXW11 (ENSODEG00000001754) #25	SMIM23 (ENSODEG00000001818) #27
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000049916	C5orf47 (ENSHGLG00000040572) #7	CPEB4 (ENSHGLG00000008897) #8	ENSHGLG00000041881 #9	STC2 (ENSHGLG00000017592) #10	NKX2-5 (ENSHGLG00000017269) #11	BNIP1 (ENSHGLG00000018031) #12	ENSHGLG00000017817 #14	ENSHGLG00000021190	ENSHGLG00000018219 #15	ENSHGLG00000017100	ERGIC1 (ENSHGLG00000050911) #18	DUSP1 (ENSHGLG00000012633) #19	NEURL1B (ENSHGLG00000039883) #20	SH3PXD2B (ENSHGLG00000009542) #21	UBTD2 (ENSHGLG00000044520) #22	EFCAB9 (ENSHGLG00000006358) #23	STK10 (ENSHGLG00000007426) #24	ENSHGLG00000048340	FBXW11 (ENSHGLG00000010874) #25	ENSHGLG00000032517	SMIM23 (ENSHGLG00000009367) #27	ENSHGLG00000040705	FGF18 (ENSHGLG00000049396) #28	NPM1 (ENSHGLG00000013669) ##29	ENSHGLG00000015459	TLX3 (ENSHGLG00000014254) #30	RANBP17 (ENSHGLG00000014605) #33	ENSHGLG00000035784	GABRP (ENSHGLG00000033733) #34	KCNIP1 (ENSHGLG00000013570) #36
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156641 #22
Common shrew	MODERN SPECIES	8720																UBTD2 (ENSSARG00000004915) #22
Hedgehog	MODERN SPECIES	6321																UBTD2 (ENSEEUG00000005461) #22
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Megabat	MODERN SPECIES	2086															SH3PXD2B (ENSPVAG00000001582) #21	UBTD2 (ENSPVAG00000001581) #22
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Microbat	MODERN SPECIES	1479														NEURL1B (ENSMLUG00000026971) #20	ENSMLUG00000015005 #21	UBTD2 (ENSMLUG00000003394) #22	EFCAB9 (ENSMLUG00000030111) #23	STK10 (ENSMLUG00000006311) #24	FBXW11 (ENSMLUG00000006302) #25
Greater horseshoe bat	MODERN SPECIES	16	MSX2 (ENSRFEG00010007947)	NSG2 (ENSRFEG00010007915)	C5orf47 (ENSRFEG00010007860) #7	CPEB4 (ENSRFEG00010007464) #8	ENSRFEG00010007368 #9	STC2 (ENSRFEG00010007301) #10	NKX2-5 (ENSRFEG00010007273) #11	BNIP1 (ENSRFEG00010007189) #12	CREBRF (ENSRFEG00010007123) #14	ENSRFEG00010007076 #15	RPL26L1 (ENSRFEG00010007037) #16	ERGIC1 (ENSRFEG00010006938) #18	DUSP1 (ENSRFEG00010006882) #19	NEURL1B (ENSRFEG00010006802) #20	SH3PXD2B (ENSRFEG00010006731) #21	UBTD2 (ENSRFEG00010006696) #22	EFCAB9 (ENSRFEG00010006675) #23	STK10 (ENSRFEG00010006622) #24	FBXW11 (ENSRFEG00010006429) #25	FGF18 (ENSRFEG00010006277) #28	ENSRFEG00010006113 ##29	TLX3 (ENSRFEG00010005948) #30	RANBP17 (ENSRFEG00010005910) #33	ENSRFEG00010005874	GABRP (ENSRFEG00010005792) #34	KCNMB1 (ENSRFEG00010020917) #35	KCNIP1 (ENSRFEG00010020846) #36	LCP2 (ENSRFEG00010020758) #37	C5orf58 (ENSRFEG00010020729)	FOXI1 (ENSRFEG00010020710)	INSYN2B (ENSRFEG00010020694)
Equus	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00950000183120.e.b.a.a.b.b.a.b	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.w ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316
Donkey	MODERN SPECIES	29	DRD1 (ENSEASG00005026731)	MSX2 (ENSEASG00005036074)	ENSEASG00005025007 #7	CPEB4 (ENSEASG00005011952) #8	ENSEASG00005011948 #9	STC2 (ENSEASG00005024262) #10	NKX2-5 (ENSEASG00005011942) #11	BNIP1 (ENSEASG00005027404) #12	CREBRF (ENSEASG00005011938) #14	ATP6V0E1 (ENSEASG00005011936) #15	RPL26L1 (ENSEASG00005011935) #16	ERGIC1 (ENSEASG00005011934) #18	DUSP1 (ENSEASG00005011932) #19	NEURL1B (ENSEASG00005028285) #20	SH3PXD2B (ENSEASG00005011927) #21	UBTD2 (ENSEASG00005028770) #22	EFCAB9 (ENSEASG00005011925) #23	STK10 (ENSEASG00005011922) #24	FBXW11 (ENSEASG00005011915) #25	SMIM23 (ENSEASG00005024362) #27	ENSEASG00005011908	FGF18 (ENSEASG00005033570) #28	ENSEASG00005011903 ##29	TLX3 (ENSEASG00005011900) #30	RANBP17 (ENSEASG00005010605) #33	GABRP (ENSEASG00005013457) #34	KCNIP1 (ENSEASG00005013452) #36	KCNMB1 (ENSEASG00005013450) #35	LCP2 (ENSEASG00005013437) #37	C5orf58 (ENSEASG00005025476)	FOXI1 (ENSEASG00005036642)
Horse	MODERN SPECIES	5	MSX2 (ENSECAG00000011749)	NSG2 (ENSECAG00000013801)	C14H5orf47 (ENSECAG00000015624) #7	CPEB4 (ENSECAG00000016921) #8	ENSECAG00000021784 #9	STC2 (ENSECAG00000022263) #10	NKX2-5 (ENSECAG00000023495) #11	BNIP1 (ENSECAG00000023543) #12	CREBRF (ENSECAG00000024559) #14	RPL26L1 (ENSECAG00000000869) #15	ENSECAG00000059561 ##16	ERGIC1 (ENSECAG00000007541) #18	DUSP1 (ENSECAG00000009958) #19	NEURL1B (ENSECAG00000039619) #20	SH3PXD2B (ENSECAG00000009968) #21	UBTD2 (ENSECAG00000038912) #22	EFCAB9 (ENSECAG00000015586) #23	STK10 (ENSECAG00000016265) #24	FBXW11 (ENSECAG00000011756) #25	SMIM23 (ENSECAG00000018524) #27	ENSECAG00000049830	ENSECAG00000003655	FGF18 (ENSECAG00000030850) #28	NPM1 (ENSECAG00000021950) ##29	TLX3 (ENSECAG00000007840) #30	RANBP17 (ENSECAG00000008393) #33	GABRP (ENSECAG00000014418) #34	ENSECAG00000050403	KCNIP1 (ENSECAG00000019400) #36	KCNMB1 (ENSECAG00000021360) #35	LCP2 (ENSECAG00000021603) #37
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Ursidae	ANCESTRAL SPECIES	24	ENSGT00390000000483.a.a	ENSGT00940000167072	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.b.b.b ##16	ENSGT00390000014165.d ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501.a #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00510000047951
Ursus	ANCESTRAL SPECIES	10	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00940000167072	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.d ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501.a #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000161316	ENSGT01100000266992	ENSGT00510000047951
Polar bear	MODERN SPECIES	179	CPLX2 (ENSUMAG00000024512)	HRH2 (ENSUMAG00000024513)	SFXN1 (ENSUMAG00000024515)	DRD1 (ENSUMAG00000024516)	MSX2 (ENSUMAG00000024517)	ENSUMAG00000024518	CPEB4 (ENSUMAG00000024519) #8	STC2 (ENSUMAG00000024523) #10	BNIP1 (ENSUMAG00000024525) #12	CREBRF (ENSUMAG00000024526) #14	ATP6V0E1 (ENSUMAG00000024527) #15	ENSUMAG00000024528 ##16	ERGIC1 (ENSUMAG00000024529) #18	DUSP1 (ENSUMAG00000024530) #19	SH3PXD2B (ENSUMAG00000024532) #21	UBTD2 (ENSUMAG00000024535) #22	EFCAB9 (ENSUMAG00000024536) #23	STK10 (ENSUMAG00000024537) #24	FBXW11 (ENSUMAG00000024650) #25	SMIM23 (ENSUMAG00000024651) #27	FGF18 (ENSUMAG00000024652) #28	ENSUMAG00000024653 ##29	RANBP17 (ENSUMAG00000024660) #33	GABRP (ENSUMAG00000024666) #34	KCNIP1 (ENSUMAG00000024667) #36	KCNMB1 (ENSUMAG00000024668) #35	LCP2 (ENSUMAG00000024670) #37	FOXI1 (ENSUMAG00000024672)	ENSUMAG00000024673	DOCK2 (ENSUMAG00000024674)	INSYN2B (ENSUMAG00000024676)
American black bear	MODERN SPECIES	2323																UBTD2 (ENSUAMG00000000133) #22	EFCAB9 (ENSUAMG00000000052) #23	STK10 (ENSUAMG00000022984) #24
Giant Panda	MODERN SPECIES	13	MSX2 (ENSAMEG00000011380)	NSG2 (ENSAMEG00000011368)	ENSAMEG00000025521	CPEB4 (ENSAMEG00000011342) #8	ENSAMEG00000011333 #9	STC2 (ENSAMEG00000011326) #10	BNIP1 (ENSAMEG00000011310) #12	NKX2-5 (ENSAMEG00000028084) #11	CREBRF (ENSAMEG00000011290) #14	ATP6V0E1 (ENSAMEG00000029545) #15	ENSAMEG00000011270 ##16	ERGIC1 (ENSAMEG00000011244) #18	DUSP1 (ENSAMEG00000011224) #19	NEURL1B (ENSAMEG00000011213) #20	SH3PXD2B (ENSAMEG00000027237) #21	UBTD2 (ENSAMEG00000011190) #22	ENSAMEG00000011187 #23	STK10 (ENSAMEG00000011144) #24	FBXW11 (ENSAMEG00000011107) #25	SMIM23 (ENSAMEG00000027396) #27	FGF18 (ENSAMEG00000027271) #28	ENSAMEG00000003910 ##29	TLX3 (ENSAMEG00000003951) #30	RANBP17 (ENSAMEG00000003955) #33	GABRP (ENSAMEG00000003979) #34	KCNIP1 (ENSAMEG00000003998) #36	KCNMB1 (ENSAMEG00000030560) #35	LCP2 (ENSAMEG00000004097) #37	C5orf58 (ENSAMEG00000023780)	FOXI1 (ENSAMEG00000001516)	DOCK2 (ENSAMEG00000008771)
Mustelinae	ANCESTRAL SPECIES	13	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Ferret	MODERN SPECIES	162	MSX2 (ENSMPUG00000012673)	NSG2 (ENSMPUG00000012677)	C5orf47 (ENSMPUG00000012685) #7	CPEB4 (ENSMPUG00000012687) #8	ENSMPUG00000012689	ENSMPUG00000012693 #9	STC2 (ENSMPUG00000012704) #10	NKX2-5 (ENSMPUG00000012707) #11	BNIP1 (ENSMPUG00000012710) #12	CREBRF (ENSMPUG00000012726) #14	RPL26L1 (ENSMPUG00000012729) #16	ERGIC1 (ENSMPUG00000012743) #18	DUSP1 (ENSMPUG00000012746) #19	NEURL1B (ENSMPUG00000012751) #20	SH3PXD2B (ENSMPUG00000012754) #21	UBTD2 (ENSMPUG00000012758) #22	EFCAB9 (ENSMPUG00000012759) #23	STK10 (ENSMPUG00000012761) #24	ENSMPUG00000012767	FBXW11 (ENSMPUG00000012769) #25	ENSMPUG00000012839	SMIM23 (ENSMPUG00000012844) #27	FGF18 (ENSMPUG00000012855) #28	ENSMPUG00000012858 ##29	TLX3 (ENSMPUG00000012862) #30	RANBP17 (ENSMPUG00000012874) #33	GABRP (ENSMPUG00000012885) #34	KCNIP1 (ENSMPUG00000012891) #36	KCNMB1 (ENSMPUG00000012894) #35	LCP2 (ENSMPUG00000012897) #37	FOXI1 (ENSMPUG00000012982)
American mink	MODERN SPECIES	101	MSX2 (ENSNVIG00000021793)	NSG2 (ENSNVIG00000021801)	C5orf47 (ENSNVIG00000021820) #7	CPEB4 (ENSNVIG00000021827) #8	ENSNVIG00000021892 #9	STC2 (ENSNVIG00000021901) #10	NKX2-5 (ENSNVIG00000021910) #11	SEC20 (ENSNVIG00000021912) #12	CREBRF (ENSNVIG00000021945) #14	ATP6V0E1 (ENSNVIG00000021974) #15	RPL26L1 (ENSNVIG00000022013) #16	ERGIC1 (ENSNVIG00000022026) #18	DUSP1 (ENSNVIG00000022051) #19	NEURL1B (ENSNVIG00000022058) #20	SH3PXD2B (ENSNVIG00000022076) #21	UBTD2 (ENSNVIG00000022111) #22	EFCAB9 (ENSNVIG00000022124) #23	STK10 (ENSNVIG00000022143) #24	FBXW11 (ENSNVIG00000022157) #25	FGF18 (ENSNVIG00000022241) #28	ENSNVIG00000022254 ##29	TLX3 (ENSNVIG00000022330) #30	RANBP17 (ENSNVIG00000022334) #33	GABRP (ENSNVIG00000022383) #34	KCNIP1 (ENSNVIG00000022447) #36	KCNMB1 (ENSNVIG00000022481) #35	LCP2 (ENSNVIG00000022495) #37	C5orf58 (ENSNVIG00000022567)	FOXI1 (ENSNVIG00000022570)	DOCK2 (ENSNVIG00000022575)	INSYN2B (ENSNVIG00000022610)
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00390000008496.i.a	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.fb #15	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Red fox	MODERN SPECIES	2	ENSVVUG00000002012	CPEB4 (ENSVVUG00000002022) #8	ENSVVUG00000002062	ENSVVUG00000002071 #9	STC2 (ENSVVUG00000002084) #10	NKX2-5 (ENSVVUG00000002086) #11	BNIP1 (ENSVVUG00000002123) #12	ENSVVUG00000002168	CREBRF (ENSVVUG00000002198) #14	ATP6V0E1 (ENSVVUG00000002213) #15	ENSVVUG00000002223 ##16	ERGIC1 (ENSVVUG00000002261) #18	DUSP1 (ENSVVUG00000002297) #19	ENSVVUG00000002314 #20	SH3PXD2B (ENSVVUG00000002354) #21	UBTD2 (ENSVVUG00000002372) #22	EFCAB9 (ENSVVUG00000002399) #23	STK10 (ENSVVUG00000002418) #24	FBXW11 (ENSVVUG00000002484) #25	SMIM23 (ENSVVUG00000002597) #27	FGF18 (ENSVVUG00000002630) #28	ENSVVUG00000002639 ##29	TLX3 (ENSVVUG00000002648) #30	RANBP17 (ENSVVUG00000002668) #33	ENSVVUG00000002726	GABRP (ENSVVUG00000002730) #34	KCNIP1 (ENSVVUG00000002751) #36	KCNMB1 (ENSVVUG00000002761) #35	LCP2 (ENSVVUG00000002768) #37	FOXI1 (ENSVVUG00000002797)	DOCK2 (ENSVVUG00000002823)
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00390000008496.i.a	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.fb #15	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Dingo	MODERN SPECIES	324	MSX2 (ENSCAFG00020011431)	NSG2 (ENSCAFG00020011410)	C5orf47 (ENSCAFG00020011376) #7	CPEB4 (ENSCAFG00020011285) #8	ENSCAFG00020011279	ENSCAFG00020011274 #9	STC2 (ENSCAFG00020011270) #10	NKX2-5 (ENSCAFG00020011268) #11	BNIP1 (ENSCAFG00020011264) #12	CREBRF (ENSCAFG00020011261) #14	ENSCAFG00020011259 #15	ERGIC1 (ENSCAFG00020011256) #18	DUSP1 (ENSCAFG00020011252) #19	NEURL1B (ENSCAFG00020011251) #20	SH3PXD2B (ENSCAFG00020011225) #21	UBTD2 (ENSCAFG00020011220) #22	STK10 (ENSCAFG00020009145) #24	FBXW11 (ENSCAFG00020008756) #25	FGF18 (ENSCAFG00020008729) #28	ENSCAFG00020008713 ##29	TLX3 (ENSCAFG00020008709) #30	ENSCAFG00020008705	RANBP17 (ENSCAFG00020005518) #33	GABRP (ENSCAFG00020005355) #34	KCNIP1 (ENSCAFG00020005302) #36	KCNMB1 (ENSCAFG00020005273) #35	LCP2 (ENSCAFG00020005197) #37	FOXI1 (ENSCAFG00020005155)	INSYN2B (ENSCAFG00020005151)	DOCK2 (ENSCAFG00020004726)	SPDL1 (ENSCAFG00020004634)
Dog	MODERN SPECIES	32	MSX2 (ENSCAFG00845000450)	CPEB4 (ENSCAFG00845000467)	C5orf47 (ENSCAFG00845000487) #7	CPEB4 (ENSCAFG00845000511) #8	ENSCAFG00845000535	ENSCAFG00845000564 #9	STC2 (ENSCAFG00845000605) #10	NKX2-5 (ENSCAFG00845000634) #11	BNIP1 (ENSCAFG00845000706) #12	CREBRF (ENSCAFG00845000727) #14	ATP6V0E1 (ENSCAFG00845000758) #15	ERGIC1 (ENSCAFG00845000852) #18	DUSP1 (ENSCAFG00845000953) #19	NEURL1B (ENSCAFG00845000993) #20	SH3PXD2B (ENSCAFG00845001080) #21	UBTD2 (ENSCAFG00845001180) #22	EFCAB9 (ENSCAFG00845001213) #23	STK10 (ENSCAFG00845001258) #24	FBXW11 (ENSCAFG00845001422) #25	SMIM23 (ENSCAFG00845001607) #27	ENSCAFG00845001623	FGF18 (ENSCAFG00845001658) #28	NPM1 (ENSCAFG00845001853) ##29	TLX3 (ENSCAFG00845001907) #30	RANBP17 (ENSCAFG00845002032) #33	GABRP (ENSCAFG00845002228) #34	KCNIP1 (ENSCAFG00845002324) #36	KCNMB1 (ENSCAFG00845002523) #35	LCP2 (ENSCAFG00845002557) #37	C5orf58 (ENSCAFG00845002585)	FOXI1 (ENSCAFG00845002600)
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Cat	MODERN SPECIES		MSX2 (ENSFCAG00000033871)	NSG2 (ENSFCAG00000022137)	ENSFCAG00000041207 #7	CPEB4 (ENSFCAG00000031504) #8	ENSFCAG00000021908 #9	STC2 (ENSFCAG00000046627) #10	NKX2-5 (ENSFCAG00000000539) #11	BNIP1 (ENSFCAG00000000536) #12	CREBRF (ENSFCAG00000000534) #14	ATP6V0E1 (ENSFCAG00000031789) #15	RPL26L1 (ENSFCAG00000026949) #16	ERGIC1 (ENSFCAG00000011258) #18	DUSP1 (ENSFCAG00000037697) #19	NEURL1B (ENSFCAG00000031157) #20	SH3PXD2B (ENSFCAG00000038295) #21	UBTD2 (ENSFCAG00000044346) #22	EFCAB9 (ENSFCAG00000016235) #23	STK10 (ENSFCAG00000000434) #24	FBXW11 (ENSFCAG00000027834) #25	SMIM23 (ENSFCAG00000044613) #27	FGF18 (ENSFCAG00000007079) #28	NPM1 (ENSFCAG00000030268) ##29	TLX3 (ENSFCAG00000035960) #30	RANBP17 (ENSFCAG00000024510) #33	GABRP (ENSFCAG00000003782) #34	KCNIP1 (ENSFCAG00000031673) #36	KCNMB1 (ENSFCAG00000036866) #35	LCP2 (ENSFCAG00000000836) #37	ENSFCAG00000046620	FOXI1 (ENSFCAG00000000835)	DOCK2 (ENSFCAG00000000834)
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Tiger	MODERN SPECIES	88													DUSP1 (ENSPTIG00000021330) #19	ENSPTIG00000021333 #20	SH3PXD2B (ENSPTIG00000021346) #21	UBTD2 (ENSPTIG00000021417) #22	EFCAB9 (ENSPTIG00000021425) #23	STK10 (ENSPTIG00000021431) #24	FBXW11 (ENSPTIG00000021490) #25	SMIM23 (ENSPTIG00000021545) #27	FGF18 (ENSPTIG00000021564) #28	ENSPTIG00000021568 ##29	RANBP17 (ENSPTIG00000021586) #33	GABRP (ENSPTIG00000021600) #34
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
lion	MODERN SPECIES		MSX2 (ENSPLOG00000014575)	NSG2 (ENSPLOG00000014484)	C5orf47 (ENSPLOG00000014426) #7	CPEB4 (ENSPLOG00000014177) #8	ENSPLOG00000014087 #9	STC2 (ENSPLOG00000014037) #10	NKX2-5 (ENSPLOG00000014000) #11	BNIP1 (ENSPLOG00000013932) #12	CREBRF (ENSPLOG00000013863) #14	ATP6V0E1 (ENSPLOG00000013764) #15	RPL26L1 (ENSPLOG00000013719) #16	ERGIC1 (ENSPLOG00000013645) #18	DUSP1 (ENSPLOG00000013584) #19	NEURL1B (ENSPLOG00000013404) #20	SH3PXD2B (ENSPLOG00000013192) #21	UBTD2 (ENSPLOG00000013141) #22	EFCAB9 (ENSPLOG00000013080) #23	STK10 (ENSPLOG00000013044) #24	FBXW11 (ENSPLOG00000012707) #25	FGF18 (ENSPLOG00000012527) #28	ENSPLOG00000012460 ##29	TLX3 (ENSPLOG00000012406) #30	RANBP17 (ENSPLOG00000012173) #33	GABRP (ENSPLOG00000011935) #34	KCNMB1 (ENSPLOG00000011886) #35	KCNIP1 (ENSPLOG00000011622) #36	LCP2 (ENSPLOG00000011278) #37	C5orf58 (ENSPLOG00000011213)	FOXI1 (ENSPLOG00000011159)	INSYN2B (ENSPLOG00000011126)	DOCK2 (ENSPLOG00000010942)
leopard	MODERN SPECIES	18	DRD1 (ENSPPRG00000019529)	MSX2 (ENSPPRG00000023106)	NSG2 (ENSPPRG00000000307)	CPEB4 (ENSPPRG00000001603) #8	ENSPPRG00000003207 #9	STC2 (ENSPPRG00000003601) #10	NKX2-5 (ENSPPRG00000004094) #11	BNIP1 (ENSPPRG00000005455) #12	CREBRF (ENSPPRG00000005970) #14	ATP6V0E1 (ENSPPRG00000006470) #15	RPL26L1 (ENSPPRG00000006918) #16	ERGIC1 (ENSPPRG00000008276) #18	DUSP1 (ENSPPRG00000008559) #19	NEURL1B (ENSPPRG00000009165) #20	SH3PXD2B (ENSPPRG00000009689) #21	UBTD2 (ENSPPRG00000010187) #22	EFCAB9 (ENSPPRG00000011345) #23	STK10 (ENSPPRG00000011731) #24	FBXW11 (ENSPPRG00000012730) #25	SMIM23 (ENSPPRG00000013401) #27	FGF18 (ENSPPRG00000013778) #28	ENSPPRG00000014990 ##29	TLX3 (ENSPPRG00000015978) #30	RANBP17 (ENSPPRG00000019041) #33	GABRP (ENSPPRG00000025082) #34	KCNMB1 (ENSPPRG00000025063) #35	KCNIP1 (ENSPPRG00000024956) #36	LCP2 (ENSPPRG00000024344) #37	C5orf58 (ENSPPRG00000024140)	FOXI1 (ENSPPRG00000024120)	INSYN2B (ENSPPRG00000024086)
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Suina	ANCESTRAL SPECIES	25	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489 #17	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Pig	MODERN SPECIES	7	C5orf47 (ENSSSCG00000035512) #7	CPEB4 (ENSSSCG00000016981) #8	ENSSSCG00000016982 #9	STC2 (ENSSSCG00000016983) #10	NKX2-5 (ENSSSCG00000036285) #11	BNIP1 (ENSSSCG00000016985) #12	CREBRF (ENSSSCG00000016986) #14	ENSSSCG00000016990 #15	RPL26L1 (ENSSSCG00000016989) #16	ENSSSCG00000035845 #17	ERGIC1 (ENSSSCG00000016988) #18	ENSSSCG00000056851	DUSP1 (ENSSSCG00000016991) #19	NEURL1B (ENSSSCG00000016992) #20	SH3PXD2B (ENSSSCG00000027378) #21	UBTD2 (ENSSSCG00000023948) #22	EFCAB9 (ENSSSCG00000016995) #23	STK10 (ENSSSCG00000022478) #24	FBXW11 (ENSSSCG00000023307) #25	ENSSSCG00000023757	FGF18 (ENSSSCG00000016997) #28	ENSSSCG00000016998 ##29	TLX3 (ENSSSCG00000016999) #30	RANBP17 (ENSSSCG00000017000) #33	GABRP (ENSSSCG00000021902) #34	KCNIP1 (ENSSSCG00000017003) #36	KCNMB1 (ENSSSCG00000017005) #35	LCP2 (ENSSSCG00000017006) #37	C5orf58 (ENSSSCG00000051265)	FOXI1 (ENSSSCG00000017009)	DOCK2 (ENSSSCG00000017008)
Chacoan peccary	MODERN SPECIES	97			CPEB4 (ENSCWAG00000000128) #8	ENSCWAG00000000497 #9	STC2 (ENSCWAG00000000525) #10	NKX2-5 (ENSCWAG00000000540) #11	BNIP1 (ENSCWAG00000000552) #12	CREBRF (ENSCWAG00000000582) #14	ENSCWAG00000000600 #15	RPL26L1 (ENSCWAG00000000616) #16	ENSCWAG00000000627 #17	ERGIC1 (ENSCWAG00000000647) #18	DUSP1 (ENSCWAG00000000695) #19	NEURL1B (ENSCWAG00000000720) #20	SH3PXD2B (ENSCWAG00000000790) #21	UBTD2 (ENSCWAG00000000837) #22	EFCAB9 (ENSCWAG00000000850) #23	STK10 (ENSCWAG00000000878) #24	FBXW11 (ENSCWAG00000000944) #25	FGF18 (ENSCWAG00000001037) #28	NPM1 (ENSCWAG00000001072) ##29	TLX3 (ENSCWAG00000001128) #30	RANBP17 (ENSCWAG00000001156) #33	GABRP (ENSCWAG00000001221) #34	KCNIP1 (ENSCWAG00000001291) #36	KCNMB1 (ENSCWAG00000001422) #35	LCP2 (ENSCWAG00000001455) #37	C5orf58 (ENSCWAG00000001565)	FOXI1 (ENSCWAG00000001576)	DOCK2 (ENSCWAG00000001602)	INSYN2B (ENSCWAG00000001704)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Pecora	ANCESTRAL SPECIES	25	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Percora_a	ANCESTRAL SPECIES	26	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.m ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Bovidae	ANCESTRAL SPECIES	26	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.m ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Bovinae	ANCESTRAL SPECIES	25	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00420000029792.d	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT01000000218258	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.m ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
American bison	MODERN SPECIES	3215						STC2 (ENSBBBG00000011679) #10	NKX2-5 (ENSBBBG00000011682) #11	BNIP1 (ENSBBBG00000011701) #12	CREBRF (ENSBBBG00000011711) #14	ENSBBBG00000011722 #15	RPL26L1 (ENSBBBG00000011726) #16	ERGIC1 (ENSBBBG00000002176) #18	DUSP1 (ENSBBBG00000011749) #19	NEURL1B (ENSBBBG00000011766) #20	SH3PXD2B (ENSBBBG00000011784) #21	UBTD2 (ENSBBBG00000011796) #22	EFCAB9 (ENSBBBG00000002192) #23	STK10 (ENSBBBG00000011816) #24	FBXW11 (ENSBBBG00000011859) #25	ENSBBBG00000007881	ENSBBBG00000011871	FGF18 (ENSBBBG00000011877) #28	ENSBBBG00000011930 ##29	TLX3 (ENSBBBG00000011939) #30
Bos	ANCESTRAL SPECIES	26	ENSGT00390000000483.a.a	ENSGT00940000168505	ENSGT00940000154998.a.a #8	ENSGT00420000029792.d	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT01000000218258	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.m ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Bos_b	ANCESTRAL SPECIES	29	ENSGT00390000000483.a.a	ENSGT00940000168505	ENSGT00940000154998.a.a #8	ENSGT00420000029792.d	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.d ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT01000000218258	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.m ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Cow	MODERN SPECIES	12	ENSBTAG00000048786	NSG2 (ENSBTAG00000000564)	C20H5orf47 (ENSBTAG00000054459)	CPEB4 (ENSBTAG00000009995) #8	BOD1 (ENSBTAG00000034598) #9	STC2 (ENSBTAG00000001823) #10	NKX2-5 (ENSBTAG00000020568) #11	BNIP1 (ENSBTAG00000002021) #12	CREBRF (ENSBTAG00000002020) #14	ATP6V0E1 (ENSBTAG00000015100) #15	RPL26L1 (ENSBTAG00000015099) ##16	ERGIC1 (ENSBTAG00000015955) #18	DUSP1 (ENSBTAG00000013863) #19	NEURL1B (ENSBTAG00000001429) #20	SH3PXD2B (ENSBTAG00000009019) #21	UBTD2 (ENSBTAG00000034659) #22	EFCAB9 (ENSBTAG00000008876) #23	STK10 (ENSBTAG00000017457) #24	FBXW11 (ENSBTAG00000015376) #25	ENSBTAG00000053610	ENSBTAG00000054615	FGF18 (ENSBTAG00000000128) #28	NPM1 (ENSBTAG00000015316) ##29	TLX3 (ENSBTAG00000010003) #30	RANBP17 (ENSBTAG00000024801) #33	GABRP (ENSBTAG00000002779) #34	KCNIP1 (ENSBTAG00000002865) #36	KCNMB1 (ENSBTAG00000002985) #35	LCP2 (ENSBTAG00000009381) #37	FOXI1 (ENSBTAG00000014620)	INSYN2B (ENSBTAG00000002134)
Hybrid Bos Indicus	MODERN SPECIES	12	NSG2 (ENSBIXG00005018735)	ENSBIXG00005018775	CPEB4 (ENSBIXG00005018897) #8	ENSBIXG00005018925 #9	STC2 (ENSBIXG00005018970) #10	NKX2-5 (ENSBIXG00005018998) #11	BNIP1 (ENSBIXG00005019018) #12	CREBRF (ENSBIXG00005002650) #14	ENSBIXG00005019047	ENSBIXG00005005519 #15	ENSBIXG00005019189 #18	DUSP1 (ENSBIXG00005007821) #19	NEURL1B (ENSBIXG00005019283) #20	SH3PXD2B (ENSBIXG00005019342) #21	ENSBIXG00005003145	UBTD2 (ENSBIXG00005007823) #22	EFCAB9 (ENSBIXG00005019383) #23	STK10 (ENSBIXG00005019395) #24	FBXW11 (ENSBIXG00005006031) #25	ENSBIXG00005019479	ENSBIXG00005003177	FGF18 (ENSBIXG00005019550) #28	ENSBIXG00005019594 ##29	TLX3 (ENSBIXG00005019612) #30	RANBP17 (ENSBIXG00005019712) #33	GABRP (ENSBIXG00005019798) #34	KCNMB1 (ENSBIXG00005019845) #35	KCNIP1 (ENSBIXG00005020080) #36	LCP2 (ENSBIXG00005003334) #37	C5orf58 (ENSBIXG00005003342)	FOXI1 (ENSBIXG00005005867)
Bos_a	ANCESTRAL SPECIES	74	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00420000029792.d	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT01000000218258	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.m ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00940000154903.b
Wild yak	MODERN SPECIES	2361															SH3PXD2B (ENSBMUG00000017549) #21	UBTD2 (ENSBMUG00000017568) #22	EFCAB9 (ENSBMUG00000017597) #23	STK10 (ENSBMUG00000017627) #24	FBXW11 (ENSBMUG00000017679) #25	ENSBMUG00000017728
Caprinae	ANCESTRAL SPECIES	24	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000157760.e	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00390000016262.f	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.m ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Goat	MODERN SPECIES	12	C5orf47 (ENSCHIG00000015963) #7	CPEB4 (ENSCHIG00000011030) #8	ENSCHIG00000014604	ENSCHIG00000021511 #9	STC2 (ENSCHIG00000005361) #10	NKX2-5 (ENSCHIG00000017420) #11	BNIP1 (ENSCHIG00000007910) #12	CREBRF (ENSCHIG00000011720) #14	ENSCHIG00000023731 #15	RPL26L1 (ENSCHIG00000015371) #16	ERGIC1 (ENSCHIG00000000491) #18	DUSP1 (ENSCHIG00000021879) #19	NEURL1B (ENSCHIG00000011973) #20	SH3PXD2B (ENSCHIG00000017285) #21	ENSCHIG00000019482	UBTD2 (ENSCHIG00000008177) #22	STK10 (ENSCHIG00000022275) #24	FBXW11 (ENSCHIG00000015807) #25	ENSCHIG00000020677	FGF18 (ENSCHIG00000011455) #28	ENSCHIG00000013986 ##29	TLX3 (ENSCHIG00000009023) #30	ENSCHIG00000007336 #33	GABRP (ENSCHIG00000013304) #34	KCNIP1 (ENSCHIG00000022505) #36	ENSCHIG00000019721	KCNMB1 (ENSCHIG00000016254) #35	LCP2 (ENSCHIG00000020683) #37	FOXI1 (ENSCHIG00000015541)	INSYN2B (ENSCHIG00000008171)	ENSCHIG00000022506
Rambouillet Sheep	MODERN SPECIES	7	NSG2 (ENSOARG00020020679)	C5orf47 (ENSOARG00020020601) #7	CPEB4 (ENSOARG00020019809) #8	ENSOARG00020019684 #9	STC2 (ENSOARG00020019635) #10	NKX2-5 (ENSOARG00020019608) #11	BNIP1 (ENSOARG00020019520) #12	CREBRF (ENSOARG00020019431) #14	ATP6V0E1 (ENSOARG00020019362) #15	RPL26L1 (ENSOARG00020019301) #16	ERGIC1 (ENSOARG00020019165) #18	DUSP1 (ENSOARG00020019107) #19	NEURL1B (ENSOARG00020018934) #20	SH3PXD2B (ENSOARG00020018558) #21	ENSOARG00020018509	UBTD2 (ENSOARG00020018478) #22	EFCAB9 (ENSOARG00020018435) #23	STK10 (ENSOARG00020017936) #24	ENSOARG00020017649 #25	FGF18 (ENSOARG00020017567) #28	ENSOARG00020017428 ##29	TLX3 (ENSOARG00020017378) #30	RANBP17 (ENSOARG00020016041) #33	GABRP (ENSOARG00020015850) #34	KCNMB1 (ENSOARG00020015798) #35	KCNIP1 (ENSOARG00020015228) #36	LCP2 (ENSOARG00020014665) #37	C5orf58 (ENSOARG00020014592)	FOXI1 (ENSOARG00020014555)	INSYN2B (ENSOARG00020014497)	DOCK2 (ENSOARG00020014360)
Siberian musk deer	MODERN SPECIES	182	ENSMMSG00000015984	NSG2 (ENSMMSG00000016007)	CPEB4 (ENSMMSG00000016141) #8	ENSMMSG00000016319	ENSMMSG00000016344 #9	STC2 (ENSMMSG00000016387) #10	NKX2-5 (ENSMMSG00000016422) #11	BNIP1 (ENSMMSG00000016447) #12	CREBRF (ENSMMSG00000016494) #14	ENSMMSG00000016537 #15	RPL26L1 (ENSMMSG00000016583) #16	ERGIC1 (ENSMMSG00000016601) #18	DUSP1 (ENSMMSG00000016631) #19	NEURL1B (ENSMMSG00000016666) #20	SH3PXD2B (ENSMMSG00000016746) #21	UBTD2 (ENSMMSG00000016799) #22	EFCAB9 (ENSMMSG00000016840) #23	STK10 (ENSMMSG00000016886) #24	FBXW11 (ENSMMSG00000016966) #25	FGF18 (ENSMMSG00000017102) #28	ENSMMSG00000017147 ##29	TLX3 (ENSMMSG00000017339) #30	RANBP17 (ENSMMSG00000017367) #33	GABRP (ENSMMSG00000017535) #34	KCNIP1 (ENSMMSG00000017604) #36	KCNMB1 (ENSMMSG00000018061) #35	LCP2 (ENSMMSG00000018116) #37	C5orf58 (ENSMMSG00000018219)	FOXI1 (ENSMMSG00000018248)	DOCK2 (ENSMMSG00000018299)	INSYN2B (ENSMMSG00000018530)
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.k.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Blue whale	MODERN SPECIES	14	STC2 (ENSBMSG00010011331) #10	ENSBMSG00010011323	NKX2-5 (ENSBMSG00010011319) #11	ENSBMSG00010011310	ENSBMSG00010011299	BNIP1 (ENSBMSG00010011290) #12	ENSBMSG00010011277	CREBRF (ENSBMSG00010011255) #14	ENSBMSG00010011236 #15	RPL26L1 (ENSBMSG00010011223) #16	ERGIC1 (ENSBMSG00010011201) #18	DUSP1 (ENSBMSG00010011183) #19	NEURL1B (ENSBMSG00010011096) #20	SH3PXD2B (ENSBMSG00010011059) #21	ENSBMSG00010011045	UBTD2 (ENSBMSG00010011030) #22	EFCAB9 (ENSBMSG00010011022) #23	ENSBMSG00010011019	STK10 (ENSBMSG00010011007) #24	ENSBMSG00010010999	FBXW11 (ENSBMSG00010010896) #25	SMIM23 (ENSBMSG00010010861) #27	FGF18 (ENSBMSG00010010843) #28	ENSBMSG00010010827 ##29	TLX3 (ENSBMSG00010010805) #30	RANBP17 (ENSBMSG00010010778) #33	GABRP (ENSBMSG00010010718) #34	ENSBMSG00010010657 #36	KCNMB1 (ENSBMSG00010010631) #35	RNF145 (ENSBMSG00010010449)	ENSBMSG00010010400
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.k.a.a.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Sperm whale	MODERN SPECIES	11	MSX2 (ENSPCTG00005002856)	NSG2 (ENSPCTG00005002847)	C5orf47 (ENSPCTG00005002836) #7	CPEB4 (ENSPCTG00005002819) #8	BOD1 (ENSPCTG00005002798) #9	STC2 (ENSPCTG00005002775) #10	NKX2-5 (ENSPCTG00005002758) #11	BNIP1 (ENSPCTG00005002731) #12	CREBRF (ENSPCTG00005002713) #14	ATP6V0E1 (ENSPCTG00005002688) #15	RPL26L1 (ENSPCTG00005002672) #16	ERGIC1 (ENSPCTG00005002638) #18	DUSP1 (ENSPCTG00005002618) #19	NEURL1B (ENSPCTG00005002578) #20	SH3PXD2B (ENSPCTG00005002536) #21	UBTD2 (ENSPCTG00005002517) #22	EFCAB9 (ENSPCTG00005002503) #23	STK10 (ENSPCTG00005002452) #24	FBXW11 (ENSPCTG00005002420) #25	SMIM23 (ENSPCTG00005002400) #27	FGF18 (ENSPCTG00005002388) #28	NPM1 (ENSPCTG00005002370) ##29	TLX3 (ENSPCTG00005002353) #30	RANBP17 (ENSPCTG00005002281) #33	GABRP (ENSPCTG00005002206) #34	KCNMB1 (ENSPCTG00005002175) #35	KCNIP1 (ENSPCTG00005002065) #36	LCP2 (ENSPCTG00005001929) #37	C2H5orf58 (ENSPCTG00005001891)	FOXI1 (ENSPCTG00005001878)	INSYN2B (ENSPCTG00005001869)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.k.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Dolphin	MODERN SPECIES	1756															SH3PXD2B (ENSTTRG00000012935) #21	UBTD2 (ENSTTRG00000012934) #22	EFCAB9 (ENSTTRG00000012933) #23	STK10 (ENSTTRG00000012927) #24
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.k.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Vaquita	MODERN SPECIES	14	NSG2 (ENSPSNG00000006661)	ENSPSNG00000006717	C5orf47 (ENSPSNG00000006745) #7	CPEB4 (ENSPSNG00000006810) #8	ENSPSNG00000006924 #9	STC2 (ENSPSNG00000006970) #10	NKX2-5 (ENSPSNG00000007002) #11	BNIP1 (ENSPSNG00000007042) #12	CREBRF (ENSPSNG00000007099) #14	ENSPSNG00000007148 #15	RPL26L1 (ENSPSNG00000007180) #16	ERGIC1 (ENSPSNG00000007216) #18	DUSP1 (ENSPSNG00000007271) #19	NEURL1B (ENSPSNG00000007317) #20	SH3PXD2B (ENSPSNG00000007402) #21	UBTD2 (ENSPSNG00000007475) #22	EFCAB9 (ENSPSNG00000007521) #23	STK10 (ENSPSNG00000007570) #24	ENSPSNG00000007596	FBXW11 (ENSPSNG00000007701) #25	SMIM23 (ENSPSNG00000007767) #27	FGF18 (ENSPSNG00000007820) #28	ENSPSNG00000007851 ##29	TLX3 (ENSPSNG00000007915) #30	RANBP17 (ENSPSNG00000007956) #33	GABRP (ENSPSNG00000008024) #34	KCNIP1 (ENSPSNG00000008231) #36	KCNMB1 (ENSPSNG00000008456) #35	LCP2 (ENSPSNG00000008524) #37	C5orf58 (ENSPSNG00000008844)	FOXI1 (ENSPSNG00000008872)
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00640000091672 #7	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b.k.a.a.a ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A
Narwhal	MODERN SPECIES	298	C5orf47 (ENSMMNG00015008001) #7	CPEB4 (ENSMMNG00015007861) #8	ENSMMNG00015007782 #9	STC2 (ENSMMNG00015007763) #10	ENSMMNG00015007753	NKX2-5 (ENSMMNG00015007742) #11	BNIP1 (ENSMMNG00015007725) #12	CREBRF (ENSMMNG00015007693) #14	ENSMMNG00015007663 #15	RPL26L1 (ENSMMNG00015007637) #16	ENSMMNG00015007623	ERGIC1 (ENSMMNG00015007594) #18	DUSP1 (ENSMMNG00015007561) #19	NEURL1B (ENSMMNG00015007510) #20	SH3PXD2B (ENSMMNG00015007447) #21	UBTD2 (ENSMMNG00015007429) #22	EFCAB9 (ENSMMNG00015007406) #23	STK10 (ENSMMNG00015007367) #24	ENSMMNG00015007348	FBXW11 (ENSMMNG00015007223) #25	SMIM23 (ENSMMNG00015007147) #27	FGF18 (ENSMMNG00015007127) #28	ENSMMNG00015007049 ##29	TLX3 (ENSMMNG00015007005) #30	RANBP17 (ENSMMNG00015006966) #33	GABRP (ENSMMNG00015006917) #34	KCNMB1 (ENSMMNG00015006894) #35	KCNIP1 (ENSMMNG00015006810) #36	LCP2 (ENSMMNG00015006650) #37	C5orf58 (ENSMMNG00015006620)	FOXI1 (ENSMMNG00015006610)
Beluga whale	MODERN SPECIES	33	NSG2 (ENSDLEG00000011113)	C5orf47 (ENSDLEG00000011128) #7	CPEB4 (ENSDLEG00000011156) #8	ENSDLEG00000011214 #9	STC2 (ENSDLEG00000011225) #10	NKX2-5 (ENSDLEG00000011239) #11	BNIP1 (ENSDLEG00000011252) #12	CREBRF (ENSDLEG00000011269) #14	ATP6V0E1 (ENSDLEG00000011297) #15	RPL26L1 (ENSDLEG00000011305) #16	ERGIC1 (ENSDLEG00000011315) #18	ENSDLEG00000011343	DUSP1 (ENSDLEG00000011353) #19	NEURL1B (ENSDLEG00000011362) #20	SH3PXD2B (ENSDLEG00000011382) #21	UBTD2 (ENSDLEG00000011425) #22	EFCAB9 (ENSDLEG00000011435) #23	STK10 (ENSDLEG00000011442) #24	FBXW11 (ENSDLEG00000011487) #25	FGF18 (ENSDLEG00000011572) #28	ENSDLEG00000011597 ##29	TLX3 (ENSDLEG00000011715) #30	RANBP17 (ENSDLEG00000011734) #33	GABRP (ENSDLEG00000011916) #34	KCNIP1 (ENSDLEG00000011937) #36	KCNMB1 (ENSDLEG00000011951) #35	LCP2 (ENSDLEG00000011962) #37	FOXI1 (ENSDLEG00000012032)	DOCK2 (ENSDLEG00000012052)	FAM196B (ENSDLEG00000012141)	SPDL1 (ENSDLEG00000012152)
Camelidae	ANCESTRAL SPECIES	57	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866.eb #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #28	ENSGT00940000153052.c.b.a.b ##29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00560000078585	ENSGT00940000161316	ENSGT00530000063787.A	ENSGT00940000154903
Alpaca	MODERN SPECIES	6025																ENSVPAG00000002308 #22
Arabian camel	MODERN SPECIES	14	NSG2 (ENSCDRG00005004158)	CPEB4 (ENSCDRG00005004317) #8	ENSCDRG00005004889 #9	STC2 (ENSCDRG00005004904) #10	NKX2-5 (ENSCDRG00005004925) #11	BNIP1 (ENSCDRG00005004968) #12	CREBRF (ENSCDRG00005005000) #14	ENSCDRG00005005036	ENSCDRG00005005054 #15	RPL26L1 (ENSCDRG00005005086) #16	ERGIC1 (ENSCDRG00005005118) #18	ENSCDRG00005005259 #19	DUSP1 (ENSCDRG00005005269) #19	NEURL1B (ENSCDRG00005005289) #20	SH3PXD2B (ENSCDRG00005005308) #21	UBTD2 (ENSCDRG00005005351) #22	EFCAB9 (ENSCDRG00005005368) #23	STK10 (ENSCDRG00005005406) #24	FBXW11 (ENSCDRG00005005462) #25	FGF18 (ENSCDRG00005005676) #28	ENSCDRG00005005702 ##29	TLX3 (ENSCDRG00005005878) #30	RANBP17 (ENSCDRG00005005894) #33	GABRP (ENSCDRG00005005990) #34	KCNIP1 (ENSCDRG00005006051) #36	KCNMB1 (ENSCDRG00005006283) #35	LCP2 (ENSCDRG00005006345) #37	C5orf58 (ENSCDRG00005006496)	FOXI1 (ENSCDRG00005006523)	DOCK2 (ENSCDRG00005006556)	INSYN2B (ENSCDRG00005006819)
Atlantogenata	ANCESTRAL SPECIES		ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.d #29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000161316	ENSGT00940000154903	ENSGT00530000063787.A
Xenarthra	ANCESTRAL SPECIES	369									ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27
Sloth	DUPLICATION
Sloth	MODERN SPECIES	10925																ENSCHOG00000010234 #22
Sloth	MODERN SPECIES	9909																ENSCHOG00000013277 #22
Armadillo	MODERN SPECIES	2167							ENSDNOG00000047902 #12	CREBRF (ENSDNOG00000038335) #14	ENSDNOG00000002470 #16	ERGIC1 (ENSDNOG00000025894) #18	DUSP1 (ENSDNOG00000049169) #19	NEURL1B (ENSDNOG00000030867) #20	ENSDNOG00000032370	ENSDNOG00000049433	SH3PXD2B (ENSDNOG00000046535) #21	UBTD2 (ENSDNOG00000003811) #22	EFCAB9 (ENSDNOG00000023791) #23	STK10 (ENSDNOG00000032482) #24	FBXW11 (ENSDNOG00000008383) #25	ENSDNOG00000016030 #27
Afrotheria	ANCESTRAL SPECIES	7	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.d #29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000161316	ENSGT00510000047951	ENSGT00940000159322
Afrotheria_a	ANCESTRAL SPECIES	7	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.d #29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000161316	ENSGT00940000154903	ENSGT00530000063787.A
Elephant	MODERN SPECIES	2	DRD1 (ENSLAFG00000010433)	MSX2 (ENSLAFG00000001916)	NSG2 (ENSLAFG00000028103)	CPEB4 (ENSLAFG00000016030) #8	ENSLAFG00000003066 #9	STC2 (ENSLAFG00000006193) #10	NKX2-5 (ENSLAFG00000029311) #11	ENSLAFG00000027511 #12	CREBRF (ENSLAFG00000013690) #14	RPL26L1 (ENSLAFG00000006797) #16	ERGIC1 (ENSLAFG00000006791) #18	DUSP1 (ENSLAFG00000007743) #19	NEURL1B (ENSLAFG00000020677) #20	ENSLAFG00000029644	SH3PXD2B (ENSLAFG00000016210) #21	UBTD2 (ENSLAFG00000011441) #22	EFCAB9 (ENSLAFG00000020630) #23	ENSLAFG00000023319 #24	FBXW11 (ENSLAFG00000006465) #25	SMIM23 (ENSLAFG00000007608) #27	FGF18 (ENSLAFG00000021964) #28	ENSLAFG00000007677 #29	TLX3 (ENSLAFG00000022612) #30	RANBP17 (ENSLAFG00000006675) #33	GABRP (ENSLAFG00000016812) #34	KCNIP1 (ENSLAFG00000016800) #36	KCNMB1 (ENSLAFG00000000860) #35	LCP2 (ENSLAFG00000012264) #37	FOXI1 (ENSLAFG00000026591)	INSYN2B (ENSLAFG00000004326)	DOCK2 (ENSLAFG00000006687)
Hyrax	MODERN SPECIES	7287																UBTD2 (ENSPCAG00000012855) #22	EFCAB9 (ENSPCAG00000012820) #23
Tenrec	MODERN SPECIES	6142																UBTD2 (ENSETEG00000019454) #22
Marsupialia	ANCESTRAL SPECIES	9	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.a ##16	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.b.a #29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00530000063787.A
Opossum	MODERN SPECIES		MSX2 (ENSMODG00000005933)	ENSMODG00000023086	ENSMODG00000006007	CPEB4 (ENSMODG00000006036) #8	ENSMODG00000006047 #9	STC2 (ENSMODG00000006146) #10	NKX2-5 (ENSMODG00000006154) #11	BNIP1 (ENSMODG00000044680) #12	CREBRF (ENSMODG00000006184) #14	ATP6V0E1 (ENSMODG00000044657) #15	ENSMODG00000006201 ##16	ERGIC1 (ENSMODG00000006214) #18	DUSP1 (ENSMODG00000050204) #19	NEURL1B (ENSMODG00000006234) #20	SH3PXD2B (ENSMODG00000006308) #21	UBTD2 (ENSMODG00000006341) #22	EFCAB9 (ENSMODG00000006348) #23	ENSMODG00000006392	STK10 (ENSMODG00000006383) #24	ENSMODG00000006398	FBXW11 (ENSMODG00000006464) #25	ENSMODG00000040419	FGF18 (ENSMODG00000042284) #28	ENSMODG00000006503 #29	TLX3 (ENSMODG00000006508) #30	RANBP17 (ENSMODG00000006743) #33	ENSMODG00000006751	GABRP (ENSMODG00000006766) #34	KCNIP1 (ENSMODG00000006821) #36	KCNMB1 (ENSMODG00000049950) #35	ENSMODG00000037702 #37
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.a ##16	ENSGT00390000002856	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.b.a #29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33	ENSGT00940000160813 #34	ENSGT00940000158048 #36	ENSGT00950000183039.B.b.b #35	ENSGT00940000156835 #37	ENSGT00940000172454	ENSGT00940000161316	ENSGT00940000154903
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000159824	ENSGT00390000000483.a.a	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.a ##16	ENSGT00390000002856	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.b.a #29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33
Wallaby	MODERN SPECIES	7617																UBTD2 (ENSMEUG00000014039) #22
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000154998.a.a #8	ENSGT00940000154979 #9	ENSGT00940000154576.d	ENSGT00390000005989.a #10	ENSGT00940000158996 #11	ENSGT00390000014412 #12	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.a ##16	ENSGT00390000002856	ENSGT00530000063113.C #18	ENSGT00940000159044 #19	ENSGT00940000168748.a.a	ENSGT00940000157079.a #20	ENSGT00940000158396 #21	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #27	ENSGT00940000159553 #28	ENSGT00940000153052.b.a #29	ENSGT00940000160629 #30	ENSGT00940000153139.B.b #33
koala	MODERN SPECIES	44															SH3PXD2B (ENSPCIG00000013582) #21	UBTD2 (ENSPCIG00000013586) #22	EFCAB9 (ENSPCIG00000013587) #23	STK10 (ENSPCIG00000013590) #24	FBXW11 (ENSPCIG00000013595) #25	ENSPCIG00000013606 #27	FGF18 (ENSPCIG00000035812) #28	ENSPCIG00000013615 #29	TLX3 (ENSPCIG00000013618) #30	RANBP17 (ENSPCIG00000013624) #33	ENSPCIG00000035542	GABRP (ENSPCIG00000009201) #34	KCNIP1 (ENSPCIG00000029587) #36	KCNMB1 (ENSPCIG00000029591) #35	LCP2 (ENSPCIG00000029596) #37	ENSPCIG00000035878	FOXI1 (ENSPCIG00000029606)
Common wonbat	MODERN SPECIES	1087	CPEB4 (ENSVURG00010000453) #8	ENSVURG00010000764 #9	ENSVURG00010000781	STC2 (ENSVURG00010000867) #10	ENSVURG00010000877 #11	BNIP1 (ENSVURG00010000889) #12	ENSVURG00010000900	CREBRF (ENSVURG00010000924) #14	ATP6V0E1 (ENSVURG00010000934) #15	ENSVURG00010000947 ##16	ERGIC1 (ENSVURG00010000991) #18	DUSP1 (ENSVURG00010001003) #19	NEURL1B (ENSVURG00010001019) #20	ENSVURG00010001025	SH3PXD2B (ENSVURG00010001083) #21	UBTD2 (ENSVURG00010001111) #22	EFCAB9 (ENSVURG00010001123) #23	STK10 (ENSVURG00010001138) #24	FBXW11 (ENSVURG00010001229) #25	FGF18 (ENSVURG00010001447) #28	ENSVURG00010001462 #29	TLX3 (ENSVURG00010001476) #30	RANBP17 (ENSVURG00010001640) #33	ENSVURG00010001683	GABRP (ENSVURG00010001693) #34	KCNIP1 (ENSVURG00010001747) #36	KCNMB1 (ENSVURG00010001909) #35	LCP2 (ENSVURG00010001951) #37	ENSVURG00010001973	FOXI1 (ENSVURG00010002020)	DOCK2 (ENSVURG00010002112)
Tasmanian devil	MODERN SPECIES	1	NSG2 (ENSSHAG00000026505)	CPEB4 (ENSSHAG00000025977) #8	ENSSHAG00000027063 #9	STC2 (ENSSHAG00000025128) #10	NKX2-5 (ENSSHAG00000008877) #11	BNIP1 (ENSSHAG00000028003) #12	CREBRF (ENSSHAG00000007714) #14	ATP6V0E1 (ENSSHAG00000029538) #15	ENSSHAG00000028181 ##16	ERGIC1 (ENSSHAG00000004451) #18	DUSP1 (ENSSHAG00000002204) #19	ENSSHAG00000025417	NEURL1B (ENSSHAG00000002600) #20	SH3PXD2B (ENSSHAG00000027120) #21	EFCAB9 (ENSSHAG00000022167) #23	UBTD2 (ENSSHAG00000024875) #22	STK10 (ENSSHAG00000012835) #24	FBXW11 (ENSSHAG00000012435) #25	ENSSHAG00000011730 #27	FGF18 (ENSSHAG00000031040) #28	NPM1 (ENSSHAG00000009312) #29	TLX3 (ENSSHAG00000029838) #30	RANBP17 (ENSSHAG00000000333) #33	GABRP (ENSSHAG00000001188) #34	KCNIP1 (ENSSHAG00000031219) #36	KCNMB1 (ENSSHAG00000018807) #35	LCP2 (ENSSHAG00000018705) #37	FOXI1 (ENSSHAG00000018578)	INSYN2B (ENSSHAG00000018341)	DOCK2 (ENSSHAG00000018073)	SPDL1 (ENSSHAG00000018028)
Platypus	MODERN SPECIES	84	RPS14 (ENSOANG00000043895)	ENSOANG00000002309	ENSOANG00000002305	ARSI (ENSOANG00000045896)	CAMK2A (ENSOANG00000002299)	SLC6A7 (ENSOANG00000002296)	CDX1 (ENSOANG00000039377)	PDGFRB (ENSOANG00000002294)	CSF1R (ENSOANG00000002293)	HMGXB3 (ENSOANG00000002292)	ENSOANG00000014966	ENSOANG00000004351	FLT4 (ENSOANG00000001739)	RNF130 (ENSOANG00000020588)	TBC1D9B (ENSOANG00000004120)	UBTD2 (ENSOANG00000006605) #22	ENSOANG00000039699 #23	STK10 (ENSOANG00000010949) #24	SH3PXD2B (ENSOANG00000040007) #21	NEURL1B (ENSOANG00000014559) #20	DUSP1 (ENSOANG00000040425) #19	ERGIC1 (ENSOANG00000040410) #18	ENSOANG00000022022 ##16	ENSOANG00000021011 ##16	CREBRF (ENSOANG00000003984) #14	BNIP1 (ENSOANG00000046862) #12	NKX2-5 (ENSOANG00000037400) #11	STC2 (ENSOANG00000041282) #10	ENSOANG00000045637 #9	CPEB4 (ENSOANG00000047376) #8	NSG2 (ENSOANG00000014066)
Sauria	ANCESTRAL SPECIES	17	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Lepidosauria	ANCESTRAL SPECIES	15	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Episquamata	ANCESTRAL SPECIES	4	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Elapidae	ANCESTRAL SPECIES	2	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818.p #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a.b #8	ENSGT00390000000483.a.a
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818.p #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a.b #8	ENSGT00390000000483.a.a
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00900000143729	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818.p #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a.b #8	ENSGT00390000000483.a.a
Eastern brown snake	MODERN SPECIES	6	FBXO38 (ENSPTXG00000009390)	HTR4 (ENSPTXG00000009391)	ENSPTXG00000009392	SLC26A2 (ENSPTXG00000000054)	PPARGC1B (ENSPTXG00000000068)	ARHGEF37 (ENSPTXG00000000222)	ENSPTXG00000000279	CSNK1A1 (ENSPTXG00000000431)	IL17B (ENSPTXG00000000473)	PCYOX1L (ENSPTXG00000000528)	GRPEL2 (ENSPTXG00000000539)	AFAP1L1 (ENSPTXG00000000554)	ABLIM3 (ENSPTXG00000000575)	SH3TC2 (ENSPTXG00000000607)	ADRB2 (ENSPTXG00000000624)	UBTD2 (ENSPTXG00000000628) #22	EFCAB9 (ENSPTXG00000000630) #23	STK10 (ENSPTXG00000000694) #24	SH3PXD2B (ENSPTXG00000001015) #21	NEURL1B (ENSPTXG00000001020) #20	DUSP1 (ENSPTXG00000001023) #19	ERGIC1 (ENSPTXG00000001026) #18	RPL26 (ENSPTXG00000001032) ##16	ATP6V0E1 (ENSPTXG00000001035) #15	CREBRF (ENSPTXG00000001039) #14	BNIP1 (ENSPTXG00000001046) #12	NKX2-5 (ENSPTXG00000001049) #11	STC2 (ENSPTXG00000001061) #10	ENSPTXG00000001067 #9	CPEB4 (ENSPTXG00000001069) #8	NSG2 (ENSPTXG00000001071)
Mainland tiger snake	MODERN SPECIES	4	HTR4 (ENSNSUG00000010865)	ENSNSUG00000010831	SLC26A2 (ENSNSUG00000010802)	PPARGC1B (ENSNSUG00000010762)	ARHGEF37 (ENSNSUG00000010758)	ENSNSUG00000010718	CSNK1A1 (ENSNSUG00000010717)	ENSNSUG00000010716	IL17B (ENSNSUG00000010709)	PCYOX1L (ENSNSUG00000010707)	GRPEL2 (ENSNSUG00000010706)	AFAP1L1 (ENSNSUG00000010596)	ABLIM3 (ENSNSUG00000010584)	SH3TC2 (ENSNSUG00000010581)	ADRB2 (ENSNSUG00000010579)	UBTD2 (ENSNSUG00000010577) #22	EFCAB9 (ENSNSUG00000010573) #23	STK10 (ENSNSUG00000010569) #24	SH3PXD2B (ENSNSUG00000010565) #21	NEURL1B (ENSNSUG00000010551) #20	DUSP1 (ENSNSUG00000010548) #19	ERGIC1 (ENSNSUG00000010544) #18	RPL26 (ENSNSUG00000010543) ##16	ATP6V0E1 (ENSNSUG00000010542) #15	CREBRF (ENSNSUG00000010517) #14	BNIP1 (ENSNSUG00000010509) #12	NKX2-5 (ENSNSUG00000010507) #11	STC2 (ENSNSUG00000010506) #10	ENSNSUG00000010505	ENSNSUG00000010502 #9	CPEB4 (ENSNSUG00000010499) #8
Blue-lipped sea krait	MODERN SPECIES	169																UBTD2 (ENSLLTG00000016496) #22
Indian cobra	MODERN SPECIES	1	ECHS1 (ENSNNAG00000001819)	FBXO38 (ENSNNAG00000001781)	HTR4 (ENSNNAG00000001749)	ENSNNAG00000001656	SLC26A2 (ENSNNAG00000001567)	PPARGC1B (ENSNNAG00000001536)	ARHGEF37 (ENSNNAG00000001335)	CSNK1A1 (ENSNNAG00000001230)	IL17B (ENSNNAG00000001196)	PCYOX1L (ENSNNAG00000001092)	GRPEL2 (ENSNNAG00000001028)	AFAP1L1 (ENSNNAG00000000702)	ABLIM3 (ENSNNAG00000000585)	SH3TC2 (ENSNNAG00000000550)	ADRB2 (ENSNNAG00000000525)	UBTD2 (ENSNNAG00000000511) #22	EFCAB9 (ENSNNAG00000000494) #23	STK10 (ENSNNAG00000000463) #24	SH3PXD2B (ENSNNAG00000000415) #21	NEURL1B (ENSNNAG00000000391) #20	DUSP1 (ENSNNAG00000000362) #19	ERGIC1 (ENSNNAG00000000336) #18	RPL26 (ENSNNAG00000000313) ##16	ATP6V0E1 (ENSNNAG00000000299) #15	CREBRF (ENSNNAG00000014762) #14	BNIP1 (ENSNNAG00000014746) #12	NKX2-5 (ENSNNAG00000014737) #11	STC2 (ENSNNAG00000014718) #10	ENSNNAG00000014713 #9	CPEB4 (ENSNNAG00000014689) #8	NSG2 (ENSNNAG00000014660)
Lizard	MODERN SPECIES	1	PPARGC1B (ENSACAG00000015737)	ENSACAG00000028909	ARHGEF37 (ENSACAG00000015707)	ENSACAG00000028117	ENSACAG00000036989	CSNK1A1 (ENSACAG00000015659)	IL17B (ENSACAG00000015644)	PCYOX1L (ENSACAG00000015622)	GRPEL2 (ENSACAG00000015596)	AFAP1L1 (ENSACAG00000015542)	ABLIM3 (ENSACAG00000015469)	ENSACAG00000039080	SH3TC2 (ENSACAG00000015429)	ADRB2 (ENSACAG00000015418)	ENSACAG00000038795	UBTD2 (ENSACAG00000015415) #22	ENSACAG00000015404 #23	STK10 (ENSACAG00000015294) #24	ENSACAG00000036124	SH3PXD2B (ENSACAG00000042684) #21	ENSACAG00000015261 #20	ENSACAG00000039578	DUSP1 (ENSACAG00000015246) #19	ERGIC1 (ENSACAG00000015210) #18	ENSACAG00000015187 ##16	ATP6V0E1 (ENSACAG00000015183) #15	CREBRF (ENSACAG00000015164) #14	BNIP1 (ENSACAG00000015149) #12	ENSACAG00000035116	ENSACAG00000038558	NKX2-5 (ENSACAG00000015142) #11
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000157609	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Argentine black and white tegu	MODERN SPECIES	1	HTR4 (ENSSMRG00000001233)	ENSSMRG00000001136	SLC26A2 (ENSSMRG00000001051)	PPARGC1B (ENSSMRG00000001032)	ARHGEF37 (ENSSMRG00000000923)	ENSSMRG00000000841	CSNK1A1 (ENSSMRG00000000796)	IL17B (ENSSMRG00000000774)	PCYOX1L (ENSSMRG00000000762)	GRPEL2 (ENSSMRG00000000756)	AFAP1L1 (ENSSMRG00000000709)	ABLIM3 (ENSSMRG00000000668)	SH3TC2 (ENSSMRG00000000562)	ADRB2 (ENSSMRG00000000556)	ENSSMRG00000000551	UBTD2 (ENSSMRG00000000513) #22	EFCAB9 (ENSSMRG00000000510) #23	STK10 (ENSSMRG00000000484) #24	SH3PXD2B (ENSSMRG00000000416) #21	NEURL1B (ENSSMRG00000000401) #20	DUSP1 (ENSSMRG00000000325) #19	ERGIC1 (ENSSMRG00000000312) #18	RPL26 (ENSSMRG00000000294) ##16	ATP6V0E1 (ENSSMRG00000000286) #15	CREBRF (ENSSMRG00000000260) #14	BNIP1 (ENSSMRG00000000231) #12	NKX2-5 (ENSSMRG00000000222) #11	STC2 (ENSSMRG00000000202) #10	ENSSMRG00000000165 #9	CPEB4 (ENSSMRG00000000069) #8	NSG2 (ENSSMRG00000000041)
tuatara	MODERN SPECIES	1232									IL17B (ENSSPUG00000003200)	PCYOX1L (ENSSPUG00000003214)	GRPEL2 (ENSSPUG00000003260)	AFAP1L1 (ENSSPUG00000003405)	ABLIM3 (ENSSPUG00000003470)	SH3TC2 (ENSSPUG00000003515)	ADRB2 (ENSSPUG00000003608)	UBTD2 (ENSSPUG00000003618) #22	EFCAB9 (ENSSPUG00000003620) #23	STK10 (ENSSPUG00000003630) #24	SH3PXD2B (ENSSPUG00000003640) #21
Archelosauria	ANCESTRAL SPECIES	15	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Cryptodira	ANCESTRAL SPECIES	15	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Emydidae	ANCESTRAL SPECIES	11	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Three-toed box turtle	MODERN SPECIES	177	FBXO38 (ENSTMTG00000015153)	HTR4 (ENSTMTG00000015116)	SLC26A2 (ENSTMTG00000015109)	ENSTMTG00000015086	PPARGC1B (ENSTMTG00000015044)	ARHGEF37 (ENSTMTG00000015020)	ENSTMTG00000014993	CSNK1A1 (ENSTMTG00000014973)	IL17B (ENSTMTG00000014942)	PCYOX1L (ENSTMTG00000014925)	GRPEL2 (ENSTMTG00000014920)	AFAP1L1 (ENSTMTG00000014767)	ABLIM3 (ENSTMTG00000013687)	SH3TC2 (ENSTMTG00000013579)	ADRB2 (ENSTMTG00000013564)	UBTD2 (ENSTMTG00000013558) #22	STK10 (ENSTMTG00000013536) #24	SH3PXD2B (ENSTMTG00000013489) #21	NEURL1B (ENSTMTG00000013469) #20	DUSP1 (ENSTMTG00000013458) #19
painted turtle	MODERN SPECIES	2385	HTR4 (ENSCPBG00000007919)	ENSCPBG00000007906	SLC26A2 (ENSCPBG00000007902)	ENSCPBG00000007898	PPARGC1B (ENSCPBG00000007891)	ARHGEF37 (ENSCPBG00000007872)	ENSCPBG00000007862	CSNK1A1 (ENSCPBG00000007854)	IL17B (ENSCPBG00000007844)	PCYOX1L (ENSCPBG00000007839)	GRPEL2 (ENSCPBG00000007831)	AFAP1L1 (ENSCPBG00000007799)	ABLIM3 (ENSCPBG00000007739)	SH3TC2 (ENSCPBG00000007700)	ADRB2 (ENSCPBG00000007688)	UBTD2 (ENSCPBG00000007679) #22	EFCAB9 (ENSCPBG00000007673) #23	STK10 (ENSCPBG00000007660) #24	SH3PXD2B (ENSCPBG00000007639) #21	NEURL1B (ENSCPBG00000007630) #20	DUSP1 (ENSCPBG00000007611) #19	ENSCPBG00000007606	ERGIC1 (ENSCPBG00000007601) #18	RPL26 (ENSCPBG00000007593) ##16	ATP6V0E1 (ENSCPBG00000007589) #15	CREBRF (ENSCPBG00000007577) #14	BNIP1 (ENSCPBG00000007566) #12	NKX2-5 (ENSCPBG00000007563) #11	STC2 (ENSCPBG00000007560) #10	ENSCPBG00000007551 #9	CPEB4 (ENSCPBG00000007535) #8
Testudinidae	ANCESTRAL SPECIES	16	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Goode s thornscrub tortoise	MODERN SPECIES	22	HTR4 (ENSGEVG00005010911)	SLC26A2 (ENSGEVG00005010871)	ENSGEVG00005010816	PPARGC1B (ENSGEVG00005010716)	ARHGEF37 (ENSGEVG00005010677)	ENSGEVG00005010620	CSNK1A1 (ENSGEVG00005010496)	IL17B (ENSGEVG00005010426)	PCYOX1L (ENSGEVG00005010405)	GRPEL2 (ENSGEVG00005010390)	AFAP1L1 (ENSGEVG00005010272)	ENSGEVG00005010177	ENSGEVG00005009824	SH3TC2 (ENSGEVG00005009752)	ADRB2 (ENSGEVG00005009673)	UBTD2 (ENSGEVG00005009650) #22	EFCAB9 (ENSGEVG00005009608) #23	STK10 (ENSGEVG00005009569) #24	ENSGEVG00005009428 #21	ENSGEVG00005009402 #21	NEURL1B (ENSGEVG00005009384) #20	DUSP1 (ENSGEVG00005009360) #19	ERGIC1 (ENSGEVG00005009233) #18	RPL26 (ENSGEVG00005009170) ##16	ATP6V0E1 (ENSGEVG00005009147) #15	CREBRF (ENSGEVG00005009119) #14	BNIP1 (ENSGEVG00005009102) #12	NKX2-5 (ENSGEVG00005009080) #11	STC2 (ENSGEVG00005009015) #10	ENSGEVG00005008890 #9	CPEB4 (ENSGEVG00005008855) #8
Abingdon island giant tortoise	MODERN SPECIES	2182																UBTD2 (ENSCABG00000014580) #22	EFCAB9 (ENSCABG00000014578) #23	STK10 (ENSCABG00000014196) #24	ENSCABG00000014175 #21	ENSCABG00000014173 #21	NEURL1B (ENSCABG00000014167) #20	DUSP1 (ENSCABG00000014155) #19	ERGIC1 (ENSCABG00000014150) #18	RPL26 (ENSCABG00000014147) ##16	ATP6V0E1 (ENSCABG00000014145) #15	CREBRF (ENSCABG00000014125) #14	BNIP1 (ENSCABG00000014124) #12	NKX2-5 (ENSCABG00000014122) #11	STC2 (ENSCABG00000014121) #10	ENSCABG00000014117 #9	CPEB4 (ENSCABG00000014114) #8
Chinese turtle	MODERN SPECIES	2220	IL12B (ENSPSIG00000018025)	FBXO38 (ENSPSIG00000005569)	HTR4 (ENSPSIG00000006016)	SLC26A2 (ENSPSIG00000007690)	PPARGC1B (ENSPSIG00000008358)	ARHGEF37 (ENSPSIG00000011066)	ENSPSIG00000000250	CSNK1A1 (ENSPSIG00000012179)	IL17B (ENSPSIG00000013786)	PCYOX1L (ENSPSIG00000013871)	GRPEL2 (ENSPSIG00000015124)	AFAP1L1 (ENSPSIG00000015614)	ABLIM3 (ENSPSIG00000006198)	SH3TC2 (ENSPSIG00000007989)	ADRB2 (ENSPSIG00000008710)	UBTD2 (ENSPSIG00000009210) #22	EFCAB9 (ENSPSIG00000009216) #23	STK10 (ENSPSIG00000009241) #24	SH3PXD2B (ENSPSIG00000010303) #21	NEURL1B (ENSPSIG00000010315) #20	DUSP1 (ENSPSIG00000011093) #19	ERGIC1 (ENSPSIG00000011786) #18	RPL26 (ENSPSIG00000013153) ##16	ATP6V0E1 (ENSPSIG00000013593) #15	CREBRF (ENSPSIG00000013820) #14	BNIP1 (ENSPSIG00000014624) #12	NKX2-5 (ENSPSIG00000014981) #11	STC2 (ENSPSIG00000015246) #10
Archosauria	ANCESTRAL SPECIES	17	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000163999.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a
Australian saltwater crocodile	MODERN SPECIES	34	ENSCPRG00005007158	SLC26A2 (ENSCPRG00005007205)	ENSCPRG00005007213	ENSCPRG00005007214	PPARGC1B (ENSCPRG00005007224)	ARHGEF37 (ENSCPRG00005007253)	ENSCPRG00005007347	CSNK1A1 (ENSCPRG00005007410)	IL17B (ENSCPRG00005007697)	PCYOX1L (ENSCPRG00005007700)	GRPEL2 (ENSCPRG00005007705)	AFAP1L1 (ENSCPRG00005007715)	ABLIM3 (ENSCPRG00005007745)	SH3TC2 (ENSCPRG00005007768)	ADRB2 (ENSCPRG00005007778)	UBTD2 (ENSCPRG00005007804) #22	EFCAB9 (ENSCPRG00005007806) #23	STK10 (ENSCPRG00005007810) #24	SH3PXD2B (ENSCPRG00005007836) #21	NEURL1B (ENSCPRG00005007875) #20	DUSP1 (ENSCPRG00005007884) #19	ERGIC1 (ENSCPRG00005007890) #18	RPL26 (ENSCPRG00005007902) ##16	ATP6V0E1 (ENSCPRG00005007904) #15	CREBRF (ENSCPRG00005007915) #14	BNIP1 (ENSCPRG00005007919) #12	NKX2-5 (ENSCPRG00005007932) #11	STC2 (ENSCPRG00005007937) #10	ENSCPRG00005007939 #9	CPEB4 (ENSCPRG00005007956) #8	NSG2 (ENSCPRG00005007959)
Aves	ANCESTRAL SPECIES	15	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a	ENSGT00940000159824
African ostrich	MODERN SPECIES	151	ENSSCUG00000002920	ENSSCUG00000002919	ARSI (ENSSCUG00000002918)	ENSSCUG00000002917	CD74 (ENSSCUG00000002916)	ARHGEF37 (ENSSCUG00000002913)	ENSSCUG00000002910	ENSSCUG00000002909	IL17B (ENSSCUG00000002907)	PCYOX1L (ENSSCUG00000002906)	GRPEL2 (ENSSCUG00000002905)	AFAP1L1 (ENSSCUG00000002902)	ABLIM3 (ENSSCUG00000002892)	SH3TC2 (ENSSCUG00000002891)	ADRB2 (ENSSCUG00000002887)	UBTD2 (ENSSCUG00000002885) #22	STK10 (ENSSCUG00000002883) #24	SH3PXD2B (ENSSCUG00000002881) #21	NEURL1B (ENSSCUG00000002876) #20	DUSP1 (ENSSCUG00000002873) #19	ERGIC1 (ENSSCUG00000002870) #18	RPL26 (ENSSCUG00000002868) ##16	ENSSCUG00000002866	CREBRF (ENSSCUG00000002864) #14	BNIP1 (ENSSCUG00000002862) #12	NKX2-5 (ENSSCUG00000002861) #11
Neognathae	ANCESTRAL SPECIES	14	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00960000189351	ENSGT00390000000483.a.a
Galloanserae	ANCESTRAL SPECIES	14	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00960000189351	ENSGT00390000000483.a.a
Anatidae	ANCESTRAL SPECIES	15	ENSGT00390000008582	ENSGT00940000153169.A.b.a	ENSGT00940000154108.a	ENSGT00940000159674.c	ENSGT00940000158778	ENSGT00950000183162.a.a	ENSGT00940000165340	ENSGT00390000009786	ENSGT00940000156901.A	ENSGT00940000160970	ENSGT00940000153768.b	ENSGT00940000163328	ENSGT00390000001803	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396.i #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00960000189351	ENSGT00390000000483.a.a
Pink-footed goose	MODERN SPECIES	9	UBE2D2 (ENSABRG00000014309)	CXXC5 (ENSABRG00000014324)	PSD2 (ENSABRG00000014335)	NRG2 (ENSABRG00000014354)	PURA (ENSABRG00000014361)	ENSABRG00000014366	PFDN1 (ENSABRG00000014368)	HBEGF (ENSABRG00000014370)	SLC4A9 (ENSABRG00000014373)	ANKHD1 (ENSABRG00000014545)	SRA1 (ENSABRG00000014976)	ENSABRG00000014986	ENSABRG00000014990	SH3TC2 (ENSABRG00000014994)	ADRB2 (ENSABRG00000015003)	UBTD2 (ENSABRG00000015011) #22	STK10 (ENSABRG00000015024) #24	SH3PXD2B (ENSABRG00000015043) #21	NEURL1B (ENSABRG00000015049) #20	DUSP1 (ENSABRG00000015058) #19	ERGIC1 (ENSABRG00000015062) #18	RPL26 (ENSABRG00000015065) ##16	ATP6V0E1 (ENSABRG00000015067) #15	CREBRF (ENSABRG00000015069) #14	BNIP1 (ENSABRG00000015071) #12	NKX2-5 (ENSABRG00000015089) #11	STC2 (ENSABRG00000015092) #10	ENSABRG00000015097 #9	CPEB4 (ENSABRG00000015105) #8	ENSABRG00000015107	NSG2 (ENSABRG00000015110)
Duck	MODERN SPECIES	5	PCDHAC1 (ENSAPLG00000029593)	PCDHAC2 (ENSAPLG00000003839)	ENSAPLG00000023692	ENSAPLG00000014766	NRG2 (ENSAPLG00000015077)	ENSAPLG00000019867	PFDN1 (ENSAPLG00000015211)	HBEGF (ENSAPLG00000015272)	SLC4A9 (ENSAPLG00000015338)	ENSAPLG00000002418	ENSAPLG00000024900	EIF4EBP3 (ENSAPLG00000021696)	ENSAPLG00000002721	SH3TC2 (ENSAPLG00000002842)	ADRB2 (ENSAPLG00000001729)	UBTD2 (ENSAPLG00000003246) #22	ENSAPLG00000023824	STK10 (ENSAPLG00000003252) #24	ENSAPLG00000003738 #21	ENSAPLG00000027587 #21	NEURL1B (ENSAPLG00000014967) #20	DUSP1 (ENSAPLG00000015094) #19	ERGIC1 (ENSAPLG00000015229) #18	RPL26 (ENSAPLG00000015384) ##16	ATP6V0E1 (ENSAPLG00000015489) #15	CREBRF (ENSAPLG00000015493) #14	BNIP1 (ENSAPLG00000019770) #12	NKX2-5 (ENSAPLG00000027109) #11	STC2 (ENSAPLG00000002303) #10	ENSAPLG00000002435 #9	CPEB4 (ENSAPLG00000022911) #8
Phasianidae	ANCESTRAL SPECIES	14	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b.h	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00960000189351	ENSGT00390000000483.a.a
Japanese quail	MODERN SPECIES	4	FBXO38 (ENSCJPG00005008781)	HTR4 (ENSCJPG00005008783)	ENSCJPG00005008787	SLC26A2 (ENSCJPG00005008790)	ENSCJPG00005008791	PPARGC1B (ENSCJPG00005008794)	ARHGEF37 (ENSCJPG00005008801)	CSNK1A1 (ENSCJPG00005008802)	IL17B (ENSCJPG00005008805)	PCYOX1L (ENSCJPG00005008806)	GRPEL2 (ENSCJPG00005008807)	AFAP1L1 (ENSCJPG00005008808)	ABLIM3 (ENSCJPG00005008809)	SH3TC2 (ENSCJPG00005008812)	ADRB2 (ENSCJPG00005008819)	UBTD2 (ENSCJPG00005008822) #22	STK10 (ENSCJPG00005008823) #24	SH3PXD2B (ENSCJPG00005008824) #21	NEURL1B (ENSCJPG00005008825) #20	DUSP1 (ENSCJPG00005008826) #19	ERGIC1 (ENSCJPG00005008827) #18	RPL26 (ENSCJPG00005008829) ##16	ATP6V0E1 (ENSCJPG00005008830) #15	CREBRF (ENSCJPG00005008833) #14	BNIP1 (ENSCJPG00005008834) #12	NKX2-5 (ENSCJPG00005008835) #11	STC2 (ENSCJPG00005008836) #10	ENSCJPG00005008838 #9	CPEB4 (ENSCJPG00005008840) #8	ENSCJPG00005008841	NSG2 (ENSCJPG00005008842)
Phasianidae_b	ANCESTRAL SPECIES	18	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b.h	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00960000189351	ENSGT00390000000483.a.a
Chicken	MODERN SPECIES	4	HTR4 (ENSGALG00010008169)	ENSGALG00010008173	SLC26A2 (ENSGALG00010008174)	ENSGALG00010008187	ENSGALG00010008195	PPARGC1B (ENSGALG00010008209)	ARHGEF37 (ENSGALG00010008217)	CSNK1A1 (ENSGALG00010011991)	IL17B (ENSGALG00010011754)	PCYOX1L (ENSGALG00010011764)	GRPEL2 (ENSGALG00010011784)	AFAP1L1 (ENSGALG00010011745)	ABLIM3 (ENSGALG00010012297)	SH3TC2 (ENSGALG00010012312)	ADRB2 (ENSGALG00010012314)	UBTD2 (ENSGALG00010012327) #22	STK10 (ENSGALG00010012358) #24	SH3PXD2B (ENSGALG00010012382) #21	NEURL1B (ENSGALG00010012391) #20	DUSP1 (ENSGALG00010008227) #19	ERGIC1 (ENSGALG00010009117) #18	RPL26L1 (ENSGALG00010009170) ##16	ATP6V0E1 (ENSGALG00010009228) #15	CREBRF (ENSGALG00010009256) #14	BNIP1 (ENSGALG00010009311) #12	NKX2-5 (ENSGALG00010009324) #11	STC2 (ENSGALG00010009346) #10	ENSGALG00010009378 #9	CPEB4 (ENSGALG00010009389) #8	ENSGALG00010009397	HMP19 (ENSGALG00010009415)
Turkey	MODERN SPECIES	6	IL12B (ENSMGAG00000003001)	ENSMGAG00000018749	ENSMGAG00000003033	ENSMGAG00000003088	ENSMGAG00000003112	SLC26A2 (ENSMGAG00000003118)	ENSMGAG00000022852	ENSMGAG00000003134	ARHGEF37 (ENSMGAG00000003214)	CSNK1A1 (ENSMGAG00000003239)	ENSMGAG00000021310	PCYOX1L (ENSMGAG00000003301)	AFAP1L1 (ENSMGAG00000003323)	ENSMGAG00000003360	ADRB2 (ENSMGAG00000022062)	ENSMGAG00000003447 #22	ENSMGAG00000003464 #24	SH3PXD2B (ENSMGAG00000003508) #21	ENSMGAG00000003546 #20	DUSP1 (ENSMGAG00000003557) #19	ERGIC1 (ENSMGAG00000003565) #18	ENSMGAG00000003585 ##16	CREBRF (ENSMGAG00000003597) #14	BNIP1 (ENSMGAG00000003611) #12	NKX2-5 (ENSMGAG00000021311) #11	STC2 (ENSMGAG00000019072) #10	ENSMGAG00000003652 #9	CPEB4 (ENSMGAG00000003660) #8	NSG2 (ENSMGAG00000003692)	MSX2 (ENSMGAG00000003712)	DRD1 (ENSMGAG00000015442)
Neognathae_b	ANCESTRAL SPECIES	16	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00960000189351	ENSGT00390000000483.a.a
Neognathae_c	ANCESTRAL SPECIES	19	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a	ENSGT00940000159824	ENSGT00940000155857
Golden eagle	MODERN SPECIES	14	HTR4 (ENSACCG00020016661)	ENSACCG00020011572	SLC26A2 (ENSACCG00020011604)	ENSACCG00020011626	ENSACCG00020011667	PPARGC1B (ENSACCG00020011712)	ARHGEF37 (ENSACCG00020011768)	CSNK1A1 (ENSACCG00020011837)	IL17B (ENSACCG00020011884)	PCYOX1L (ENSACCG00020011932)	GRPEL2 (ENSACCG00020011972)	AFAP1L1 (ENSACCG00020012061)	ABLIM3 (ENSACCG00020012238)	SH3TC2 (ENSACCG00020012431)	ADRB2 (ENSACCG00020012531)	UBTD2 (ENSACCG00020012552) #22	STK10 (ENSACCG00020012579) #24	SH3PXD2B (ENSACCG00020012626) #21	NEURL1B (ENSACCG00020012648) #20	DUSP1 (ENSACCG00020012672) #19	ENSACCG00020012686	ERGIC1 (ENSACCG00020012710) #18	RPL26 (ENSACCG00020012774) ##16	CREBRF (ENSACCG00020012815) #14	BNIP1 (ENSACCG00020012856) #12	NKX2-5 (ENSACCG00020012874) #11	STC2 (ENSACCG00020012896) #10	ENSACCG00020012917 #9	CPEB4 (ENSACCG00020012959) #8	NSG2 (ENSACCG00020012980)	MSX2 (ENSACCG00020012994)
Kakapo	MODERN SPECIES	6	ENSSHBG00005018064	SLC26A2 (ENSSHBG00005018055)	ENSSHBG00005018051	ENSSHBG00005018047	PPARGC1B (ENSSHBG00005018033)	ARHGEF37 (ENSSHBG00005018029)	ENSSHBG00005018025	CSNK1A1 (ENSSHBG00005018017)	IL17B (ENSSHBG00005018010)	PCYOX1L (ENSSHBG00005018008)	GRPEL2 (ENSSHBG00005018006)	AFAP1L1 (ENSSHBG00005018003)	ABLIM3 (ENSSHBG00005018000)	SH3TC2 (ENSSHBG00005017984)	ADRB2 (ENSSHBG00005017975)	UBTD2 (ENSSHBG00005017971) #22	STK10 (ENSSHBG00005016343) #24	SH3PXD2B (ENSSHBG00005016219) #21	NEURL1B (ENSSHBG00005016201) #20	DUSP1 (ENSSHBG00005016192) #19	ERGIC1 (ENSSHBG00005016189) #18	RPL26 (ENSSHBG00005016182) ##16	CREBRF (ENSSHBG00005016175) #14	BNIP1 (ENSSHBG00005016165) #12	NKX2-5 (ENSSHBG00005016162) #11	STC2 (ENSSHBG00005016156) #10	ENSSHBG00005016151 #9	CPEB4 (ENSSHBG00005016128) #8	NSG2 (ENSSHBG00005016125)	MSX2 (ENSSHBG00005016120)	DRD1 (ENSSHBG00005016119)
Passeriformes	ANCESTRAL SPECIES	14	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00960000189351	ENSGT00390000000483.a.a
Great tit	MODERN SPECIES	4	ENSPMJG00000006344	SLC26A2 (ENSPMJG00000006346)	ENSPMJG00000006348	ENSPMJG00000006353	ENSPMJG00000006357	PPARGC1B (ENSPMJG00000006359)	ARHGEF37 (ENSPMJG00000006361)	CSNK1A1 (ENSPMJG00000006380)	IL17B (ENSPMJG00000006386)	PCYOX1L (ENSPMJG00000006393)	GRPEL2 (ENSPMJG00000006401)	AFAP1L1 (ENSPMJG00000006405)	ABLIM3 (ENSPMJG00000006419)	SH3TC2 (ENSPMJG00000006424)	ADRB2 (ENSPMJG00000006425)	UBTD2 (ENSPMJG00000006444) #22	STK10 (ENSPMJG00000006445) #24	SH3PXD2B (ENSPMJG00000006447) #21	NEURL1B (ENSPMJG00000006456) #20	DUSP1 (ENSPMJG00000006458) #19	ERGIC1 (ENSPMJG00000006461) #18	RPL26 (ENSPMJG00000006464) ##16	CREBRF (ENSPMJG00000006480) #14	BNIP1 (ENSPMJG00000006485) #12	NKX2-5 (ENSPMJG00000006487) #11	STC2 (ENSPMJG00000006490) #10	ENSPMJG00000006523 #9	CPEB4 (ENSPMJG00000006528) #8	ENSPMJG00000006535	NSG2 (ENSPMJG00000006538)	MSX2 (ENSPMJG00000006547)
Passeriformes_d	ANCESTRAL SPECIES	15	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a	ENSGT00940000159824
Flycatcher	MODERN SPECIES	4	ENSFALG00000028330	ENSFALG00000026287	PPARGC1B (ENSFALG00000008858)	ARHGEF37 (ENSFALG00000008850)	ENSFALG00000008853	ENSFALG00000025562	CSNK1A1 (ENSFALG00000028539)	ENSFALG00000025781	IL17B (ENSFALG00000025253)	PCYOX1L (ENSFALG00000008842)	GRPEL2 (ENSFALG00000008841)	AFAP1L1 (ENSFALG00000008840)	ABLIM3 (ENSFALG00000008837)	SH3TC2 (ENSFALG00000008835)	ADRB2 (ENSFALG00000014433)	ENSFALG00000008833 #22	ENSFALG00000008830 #24	SH3PXD2B (ENSFALG00000008827) #21	ENSFALG00000008824 #20	DUSP1 (ENSFALG00000008823) #19	ERGIC1 (ENSFALG00000008820) #18	ENSFALG00000008818 ##16	ATP6V0E1 (ENSFALG00000008817) #15	CREBRF (ENSFALG00000008816) #14	ENSFALG00000008815	NKX2-5 (ENSFALG00000008813) #11	STC2 (ENSFALG00000025551) #10	ENSFALG00000008811 #9	CPEB4 (ENSFALG00000008809) #8	NSG2 (ENSFALG00000027426)	MSX2 (ENSFALG00000014415)
Passeriformes_g	ANCESTRAL SPECIES	15	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a	ENSGT00940000159824
Medium ground finch	MODERN SPECIES	11	ENSGFOG00000010669	SLC26A2 (ENSGFOG00000010656)	ENSGFOG00000010647	ENSGFOG00000010644	PPARGC1B (ENSGFOG00000010638)	ARHGEF37 (ENSGFOG00000010621)	CSNK1A1 (ENSGFOG00000010614)	ENSGFOG00000010610	IL17B (ENSGFOG00000010605)	PCYOX1L (ENSGFOG00000010603)	GRPEL2 (ENSGFOG00000010597)	AFAP1L1 (ENSGFOG00000010583)	ABLIM3 (ENSGFOG00000010564)	ENSGFOG00000010556	ADRB2 (ENSGFOG00000010549)	UBTD2 (ENSGFOG00000010545) #22	STK10 (ENSGFOG00000007164) #24	SH3PXD2B (ENSGFOG00000007045) #21	NEURL1B (ENSGFOG00000007039) #20	DUSP1 (ENSGFOG00000007032) #19	ERGIC1 (ENSGFOG00000007022) #18	RPL26 (ENSGFOG00000007011) ##16	ATP6V0E1 (ENSGFOG00000007006) #15	CREBRF (ENSGFOG00000006997) #14	BNIP1 (ENSGFOG00000006991) #12	NKX2-5 (ENSGFOG00000006986) #11	STC2 (ENSGFOG00000006981) #10	CPEB4 (ENSGFOG00000006967) #8	NSG2 (ENSGFOG00000006955)	ENSGFOG00000006950	MSX2 (ENSGFOG00000006943)
Passeroidea	ANCESTRAL SPECIES	15	ENSGT00960000189299	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT01030000234583.a.b.b.f.b	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00940000158396 #21	ENSGT00940000157079.a #20	ENSGT00940000159044 #19	ENSGT00530000063113.C #18	ENSGT00390000014165.c.a.a ##16	ENSGT00940000156866 #15	ENSGT00390000007125.b #14	ENSGT00390000014412 #12	ENSGT00940000158996 #11	ENSGT00390000005989.a #10	ENSGT00940000154979 #9	ENSGT00940000154998.a.a #8	ENSGT00390000000483.a.a	ENSGT00940000159824
Zebra finch	MODERN SPECIES	4	FBXO38 (ENSTGUG00000000212)	HTR4 (ENSTGUG00000000218)	ENSTGUG00000000226	SLC26A2 (ENSTGUG00000000228)	ENSTGUG00000020371	PPARGC1B (ENSTGUG00000000232)	ARHGEF37 (ENSTGUG00000000241)	CSNK1A1 (ENSTGUG00000000243)	IL17B (ENSTGUG00000000251)	PCYOX1L (ENSTGUG00000000252)	GRPEL2 (ENSTGUG00000027926)	AFAP1L1 (ENSTGUG00000000263)	ABLIM3 (ENSTGUG00000000269)	SH3TC2 (ENSTGUG00000000277)	ADRB2 (ENSTGUG00000000286)	UBTD2 (ENSTGUG00000029278) #22	STK10 (ENSTGUG00000000289) #24	SH3PXD2B (ENSTGUG00000022640) #21	NEURL1B (ENSTGUG00000000298) #20	DUSP1 (ENSTGUG00000000299) #19	ERGIC1 (ENSTGUG00000000300) #18	RPL26 (ENSTGUG00000000309) ##16	ENSTGUG00000026118	CREBRF (ENSTGUG00000000314) #14	BNIP1 (ENSTGUG00000000316) #12	NKX2-5 (ENSTGUG00000020969) #11	STC2 (ENSTGUG00000029550) #10	ENSTGUG00000000324 #9	CPEB4 (ENSTGUG00000000329) #8	ENSTGUG00000021029	NSG2 (ENSTGUG00000000333)
Common canary	MODERN SPECIES	16	FBXO38 (ENSSCAG00000001522)	HTR4 (ENSSCAG00000001475)	ENSSCAG00000001469	SLC26A2 (ENSSCAG00000001463)	ENSSCAG00000001456	PPARGC1B (ENSSCAG00000001426)	ARHGEF37 (ENSSCAG00000001410)	CSNK1A1 (ENSSCAG00000001399)	IL17B (ENSSCAG00000001387)	PCYOX1L (ENSSCAG00000001381)	GRPEL2 (ENSSCAG00000001377)	AFAP1L1 (ENSSCAG00000001363)	ABLIM3 (ENSSCAG00000001170)	SH3TC2 (ENSSCAG00000001099)	ADRB2 (ENSSCAG00000001083)	UBTD2 (ENSSCAG00000001079) #22	STK10 (ENSSCAG00000000397) #24	SH3PXD2B (ENSSCAG00000000168) #21	NEURL1B (ENSSCAG00000000152) #20	SFXN1 (ENSSCAG00000000132)	KIF20A (ENSSCAG00000000091)	BRD8 (ENSSCAG00000000078)	ENSSCAG00000000068	NHP2 (ENSSCAG00000000066)	N4BP3 (ENSSCAG00000000064)	LMAN2 (ENSSCAG00000000058)	ENSSCAG00000000054	RGS14 (ENSSCAG00000000049)	ENSSCAG00000000046	SLC34A1 (ENSSCAG00000000044)	ENSSCAG00000000041
Anura	ANCESTRAL SPECIES		ENSGT01090000260260	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT01100000263544.c.a.a.a	ENSGT00940000161330	ENSGT00950000183137.b.b	ENSGT00950000183088.a.a	ENSGT00940000153700	ENSGT00940000160854	ENSGT00390000011206.b	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641 #22	ENSGT00940000156818 #24	ENSGT00390000004149	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856	ENSGT00940000154856.A.a	ENSGT00940000161915	ENSGT00520000055570.A.b	ENSGT00940000160571	ENSGT00940000158782	ENSGT00940000154909	ENSGT00510000049083	ENSGT00950000182953.C.c	ENSGT00390000008694.b.b
Leishan spiny toad	MODERN SPECIES	6	ARHGEF37 (ENSLLEG00000010958)	ENSLLEG00000010913	CSNK1A1 (ENSLLEG00000010398)	IL17B (ENSLLEG00000010266)	PCYOX1L (ENSLLEG00000010203)	GRPEL2 (ENSLLEG00000010154)	AFAP1L1 (ENSLLEG00000009809)	ABLIM3 (ENSLLEG00000008655)	ENSLLEG00000008540	ENSLLEG00000008519	SH3TC2 (ENSLLEG00000008218)	ENSLLEG00000008172	ENSLLEG00000008163	ADRB2 (ENSLLEG00000008145)	ENSLLEG00000008087	UBTD2 (ENSLLEG00000008051) #22	STK10 (ENSLLEG00000007889) #24	SH3PXD2B (ENSLLEG00000007755) #21	NEURL1B (ENSLLEG00000007712) #20	ENSLLEG00000007700	ENSLLEG00000007690	ENSLLEG00000007678	DUSP1 (ENSLLEG00000007651) #19	ERGIC1 (ENSLLEG00000007494) #18	ENSLLEG00000007449 ##16	ATP6V0E1 (ENSLLEG00000007416) #15	CREBRF (ENSLLEG00000007256) #14	BNIP1 (ENSLLEG00000007209) #12	NKX2-5 (ENSLLEG00000007176) #11	STC2 (ENSLLEG00000007140) #10	ENSLLEG00000007121
Frog	MODERN SPECIES	3	ENSXETG00000045329	pou4f3 (ENSXETG00000041097)	GPR151 (ENSXETG00000002325)	ENSXETG00000046970	ppp2r2b (ENSXETG00000020864)	csnk1a1 (ENSXETG00000020861)	pcyox1l (ENSXETG00000033269)	ENSXETG00000048140	grpel2 (ENSXETG00000020835)	afap1l1 (ENSXETG00000032942)	ablim3 (ENSXETG00000030469)	ENSXETG00000047343	sh3tc2 (ENSXETG00000030692)	ENSXETG00000045119	adrb2 (ENSXETG00000037096)	ubtd2 (ENSXETG00000014428) #22	ENSXETG00000042783	stk10 (ENSXETG00000014423) #24	pole4 (ENSXETG00000014422)	sh3pxd2b (ENSXETG00000038056) #21	ENSXETG00000042376	ENSXETG00000040995	neurl1b (ENSXETG00000001703) #20	ergic1 (ENSXETG00000018301) #18	dusp1 (ENSXETG00000027880) #19	tlr22 (ENSXETG00000046119)	sfxn1 (ENSXETG00000035035)	drd1 (ENSXETG00000013921)	msx2 (ENSXETG00000009168)	ENSXETG00000041565	nsg2 (ENSXETG00000009166)
Coelacanth	MODERN SPECIES	350														ADRB2 (ENSLACG00000003531)	ENSLACG00000006931	UBTD2 (ENSLACG00000008618) #22	EFCAB9 (ENSLACG00000009380) #23	STK10 (ENSLACG00000010317) #24	SH3PXD2B (ENSLACG00000011512) #21	ENSLACG00000022527	NEURL1B (ENSLACG00000012188) #20	DUSP1 (ENSLACG00000013873) #19	ERGIC1 (ENSLACG00000014277) #18	ATP6V0E1 (ENSLACG00000014424) #15	ENSLACG00000014584 #14	BNIP1 (ENSLACG00000014693) #12	NKX2-5 (ENSLACG00000014905) #11	STC2 (ENSLACG00000015101) #10	ENSLACG00000015630 #9	CPEB4 (ENSLACG00000016073) #8	MSX2 (ENSLACG00000016991)