Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Primates	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Lemuriformes	ANCESTRAL SPECIES	70	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.a.a.a #28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Lemuriformes_a	ANCESTRAL SPECIES	146			ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.a.a.a #28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Coquerels sifaka	MODERN SPECIES	428	SPINK13 (ENSPCOG00000018652) #7	NSG2 (ENSPCOG00000019558) #8	CPEB4 (ENSPCOG00000004676) #9	ENSPCOG00000017551 #10	STC2 (ENSPCOG00000016688) #11	NKX2-5 (ENSPCOG00000019525) #12	BNIP1 (ENSPCOG00000018899) #13	CREBRF (ENSPCOG00000024235) #14	ATP6V0E1 (ENSPCOG00000022516) #15	RPL26L1 (ENSPCOG00000016409) #16	ERGIC1 (ENSPCOG00000014528) #17	DUSP1 (ENSPCOG00000025861) #18	NEURL1B (ENSPCOG00000025987) #19	SH3PXD2B (ENSPCOG00000021760) #20	ENSPCOG00000023430 #21	UBTD2 (ENSPCOG00000014867) #22	EFCAB9 (ENSPCOG00000015386) #23	STK10 (ENSPCOG00000019111) #24	FBXW11 (ENSPCOG00000017113) #25	SMIM23 (ENSPCOG00000018006) #26	FGF18 (ENSPCOG00000028662) #27	ENSPCOG00000024038 #28	TLX3 (ENSPCOG00000015947) #29	ENSPCOG00000015791 #30	ENSPCOG00000007993 #31	GABRP (ENSPCOG00000017643) #32	KCNMB1 (ENSPCOG00000021448) #33	KCNIP1 (ENSPCOG00000015105) #34	LCP2 (ENSPCOG00000022747) #35	ENSPCOG00000012130 #36	FOXI1 (ENSPCOG00000022931) #37
Greater bamboo lemur	MODERN SPECIES	635															ENSPSMG00000017278	UBTD2 (ENSPSMG00000017274) #22	EFCAB9 (ENSPSMG00000017273) #23	STK10 (ENSPSMG00000017263) #24	FBXW11 (ENSPSMG00000017174) #25	SMIM23 (ENSPSMG00000017034) #26	FGF18 (ENSPSMG00000017028) #27	ENSPSMG00000016994 #28	TLX3 (ENSPSMG00000016978) #29	RANBP17 (ENSPSMG00000016972) #31	GABRP (ENSPSMG00000016887) #32	KCNMB1 (ENSPSMG00000016861) #33	KCNIP1 (ENSPSMG00000016848) #34	LCP2 (ENSPSMG00000016768) #35	C5orf58 (ENSPSMG00000016675)	FOXI1 (ENSPSMG00000016670) #37	INSYN2B (ENSPSMG00000016662)
Mouse lemur	MODERN SPECIES	15	TMEM128 (ENSMICG00000042056)	LYAR (ENSMICG00000000202)	ZBTB49 (ENSMICG00000042304)	NSG1 (ENSMICG00000009553) ##8	STX18 (ENSMICG00000009557)	MSX1 (ENSMICG00000043130)	ENSMICG00000044188	STK32B (ENSMICG00000047439)	EVC2 (ENSMICG00000010507)	EVC (ENSMICG00000010561)	ENSMICG00000032986	CRMP1 (ENSMICG00000005762)	C4orf50 (ENSMICG00000046962)	JAKMIP1 (ENSMICG00000002468)	SH3PXD2B (ENSMICG00000011279) #20	UBTD2 (ENSMICG00000037280) #22	EFCAB9 (ENSMICG00000041945) #23	ENSMICG00000038026	STK10 (ENSMICG00000004517) #24	ENSMICG00000004512 #25	ENSMICG00000029505	ENSMICG00000045663	FOXI1 (ENSMICG00000041455) #37	FGF18 (ENSMICG00000012403) #27	ENSMICG00000002717 ##28	TLX3 (ENSMICG00000045444) #29	ENSMICG00000033249	RANBP17 (ENSMICG00000027710) #31	GABRP (ENSMICG00000012635) #32	KCNMB1 (ENSMICG00000043676) #33	KCNIP1 (ENSMICG00000012622) #34
Bushbaby	MODERN SPECIES	118	DRD1 (ENSOGAG00000000909)	MSX2 (ENSOGAG00000032139)	NSG2 (ENSOGAG00000010238) #8	CPEB4 (ENSOGAG00000004243) #9	ENSOGAG00000001107 #10	STC2 (ENSOGAG00000007539) #11	NKX2-5 (ENSOGAG00000030259) #12	BNIP1 (ENSOGAG00000007537) #13	ENSOGAG00000030210 #14	ATP6V0E1 (ENSOGAG00000017071) #15	ENSOGAG00000032228	ERGIC1 (ENSOGAG00000017066) #17	DUSP1 (ENSOGAG00000017064) #18	NEURL1B (ENSOGAG00000026783) #19	SH3PXD2B (ENSOGAG00000012721) #20	UBTD2 (ENSOGAG00000011997) #22	EFCAB9 (ENSOGAG00000033621) #23	STK10 (ENSOGAG00000011991) #24	FBXW11 (ENSOGAG00000011988) #25	SMIM23 (ENSOGAG00000025446) #26	ENSOGAG00000028434	FGF18 (ENSOGAG00000013617) #27	ENSOGAG00000013616 ##28	TLX3 (ENSOGAG00000029862) #29	RANBP17 (ENSOGAG00000013609) #31	ENSOGAG00000028828	GABRP (ENSOGAG00000013604) #32	KCNIP1 (ENSOGAG00000013599) #34	KCNMB1 (ENSOGAG00000016972) #33	LCP2 (ENSOGAG00000002810) #35	FOXI1 (ENSOGAG00000032689) #37
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00940000163300	ENSGT00390000014165.c.a.a.h.g ##16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	5382														EFNB2 (ENSTSYG00000014456)	ENSTSYG00000029951	ENSTSYG00000028850 #22	EFCAB9 (ENSTSYG00000008293) #23	STK10 (ENSTSYG00000006260) #24
Tarsier	MODERN SPECIES	107																ENSTSYG00000026922 #22
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.s #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.g.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Cebidae	ANCESTRAL SPECIES	24	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.s #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.g.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Marmoset	MODERN SPECIES	11	ENSCJAG00000067799	ENSCJAG00000075851	NSG2 (ENSCJAG00000019152) #8	C5orf47 (ENSCJAG00000076312)	CPEB4 (ENSCJAG00000019166) #9	ENSCJAG00000031971 #10	ENSCJAG00000045816	STC2 (ENSCJAG00000054466) #11	NKX2-5 (ENSCJAG00000078127) #12	BNIP1 (ENSCJAG00000019186) #13	CREBRF (ENSCJAG00000019193) #14	ERGIC1 (ENSCJAG00000019238) #17	DUSP1 (ENSCJAG00000067622) #18	NEURL1B (ENSCJAG00000019254) #19	SH3PXD2B (ENSCJAG00000019258) #20	UBTD2 (ENSCJAG00000046779) #22	ENSCJAG00000047953	EFCAB9 (ENSCJAG00000019273) #23	ENSCJAG00000069421	ENSCJAG00000069688	STK10 (ENSCJAG00000019275) #24	ENSCJAG00000073693	FBXW11 (ENSCJAG00000019297) #25	SMIM23 (ENSCJAG00000019324) #26	FGF18 (ENSCJAG00000019329) #27	ENSCJAG00000019334 ##28	TLX3 (ENSCJAG00000038714) #29	ENSCJAG00000038990	ENSCJAG00000083773	RANBP17 (ENSCJAG00000019368) #31	GABRP (ENSCJAG00000019417) #32
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.s #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.g.b.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Bolivian squirrel monkey	MODERN SPECIES	123	NSG2 (ENSSBOG00000028874) #8	C5orf47 (ENSSBOG00000011758)	CPEB4 (ENSSBOG00000002632) #9	ENSSBOG00000023774 #10	STC2 (ENSSBOG00000035805) #11	NKX2-5 (ENSSBOG00000024121) #12	BNIP1 (ENSSBOG00000029104) #13	ENSSBOG00000026680	CREBRF (ENSSBOG00000031151) #14	ATP6V0E1 (ENSSBOG00000031772) #15	RPL26L1 (ENSSBOG00000027992) #16	ERGIC1 (ENSSBOG00000032967) #17	DUSP1 (ENSSBOG00000027324) #18	NEURL1B (ENSSBOG00000029939) #19	SH3PXD2B (ENSSBOG00000014112) #20	UBTD2 (ENSSBOG00000013274) #22	EFCAB9 (ENSSBOG00000019620) #23	STK10 (ENSSBOG00000033405) #24	FBXW11 (ENSSBOG00000023046) #25	SMIM23 (ENSSBOG00000018130) #26	FGF18 (ENSSBOG00000024519) #27	ENSSBOG00000033634 ##28	TLX3 (ENSSBOG00000034367) #29	RANBP17 (ENSSBOG00000032147) #31	GABRP (ENSSBOG00000028102) #32	KCNIP1 (ENSSBOG00000001622) #34	KCNMB1 (ENSSBOG00000026355) #33	LCP2 (ENSSBOG00000035016) #35	C5orf58 (ENSSBOG00000020509)	FOXI1 (ENSSBOG00000033617) #37	DOCK2 (ENSSBOG00000026287)
Capuchin	MODERN SPECIES	200								ENSCCAG00000036235 #14	ENSCCAG00000030182 #15	RPL26L1 (ENSCCAG00000022572) #16	ERGIC1 (ENSCCAG00000027066) #17	DUSP1 (ENSCCAG00000028115) #18	ENSCCAG00000023304	NEURL1B (ENSCCAG00000024696) #19	SH3PXD2B (ENSCCAG00000018545) #20	UBTD2 (ENSCCAG00000030325) #22	EFCAB9 (ENSCCAG00000030106) #23	STK10 (ENSCCAG00000021548) #24	ENSCCAG00000034903 #25	ENSCCAG00000035992 ##28	SMIM23 (ENSCCAG00000027927) #26	FGF18 (ENSCCAG00000025826) #27	ENSCCAG00000034814 ##28	TLX3 (ENSCCAG00000022971) #29	RANBP17 (ENSCCAG00000021816) #31	GABRP (ENSCCAG00000027392) #32	KCNIP1 (ENSCCAG00000025512) #34	KCNMB1 (ENSCCAG00000029582) #33	LCP2 (ENSCCAG00000014560) #35	ENSCCAG00000019246	FOXI1 (ENSCCAG00000029998) #37
Mas night monkey	MODERN SPECIES	610	C5orf47 (ENSANAG00000026045)	CPEB4 (ENSANAG00000038371) #9	BOD1 (ENSANAG00000025713) #10	STC2 (ENSANAG00000031511) #11	NKX2-5 (ENSANAG00000024360) #12	BNIP1 (ENSANAG00000033155) #13	ENSANAG00000026625	CREBRF (ENSANAG00000029119) #14	ENSANAG00000025907 #15	RPL26L1 (ENSANAG00000034277) #16	ENSANAG00000033316	ERGIC1 (ENSANAG00000037298) #17	DUSP1 (ENSANAG00000027062) #18	NEURL1B (ENSANAG00000038171) #19	SH3PXD2B (ENSANAG00000014072) #20	UBTD2 (ENSANAG00000033217) #22	EFCAB9 (ENSANAG00000032826) #23	STK10 (ENSANAG00000027679) #24	FBXW11 (ENSANAG00000036790) #25	ENSANAG00000024342	SMIM23 (ENSANAG00000018501) #26	FGF18 (ENSANAG00000028876) #27	ENSANAG00000034949 ##28	TLX3 (ENSANAG00000029429) #29	ENSANAG00000021888	ENSANAG00000031950	RANBP17 (ENSANAG00000028172) #31	GABRP (ENSANAG00000029839) #32	KCNMB1 (ENSANAG00000034763) #33	KCNIP1 (ENSANAG00000014990) #34	LCP2 (ENSANAG00000031590) #35
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00910000147916	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00620000089286	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35
Rhinopithecus	ANCESTRAL SPECIES	118	ENSGT00910000147916	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.i.a #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00620000089286	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35
Golden snub-nosed monkey	MODERN SPECIES	1733	ENSRROG00000040238	C5orf47 (ENSRROG00000008119)	NSG2 (ENSRROG00000032380) #8	CPEB4 (ENSRROG00000029196) #9	BOD1 (ENSRROG00000039526) #10	STC2 (ENSRROG00000030679) #11	NKX2-5 (ENSRROG00000043318) #12	BNIP1 (ENSRROG00000035092) #13	CREBRF (ENSRROG00000041689) #14	ATP6V0E1 (ENSRROG00000035355) #15	ENSRROG00000034464 #16	ERGIC1 (ENSRROG00000031072) #17	DUSP1 (ENSRROG00000027680) #18	NEURL1B (ENSRROG00000043630) #19	SH3PXD2B (ENSRROG00000038290) #20	UBTD2 (ENSRROG00000038688) #22	EFCAB9 (ENSRROG00000001287) #23	ENSRROG00000039795	STK10 (ENSRROG00000043810) #24	FBXW11 (ENSRROG00000042640) #25	SMIM23 (ENSRROG00000037550) #26	ENSRROG00000031061	FGF18 (ENSRROG00000044210) #27	NPM1 (ENSRROG00000045149) ##28	TLX3 (ENSRROG00000034639) #29	ENSRROG00000045696	RANBP17 (ENSRROG00000045173) #31
Black snub-nosed monkey	MODERN SPECIES	1977				ENSRBIG00000028275 #9	BOD1 (ENSRBIG00000027366) #10	STC2 (ENSRBIG00000042135) #11	NKX2-5 (ENSRBIG00000007305) #12	BNIP1 (ENSRBIG00000024422) #13	CREBRF (ENSRBIG00000041000) #14	ATP6V0E1 (ENSRBIG00000000223) #15	RPL26L1 (ENSRBIG00000029430) #16	ERGIC1 (ENSRBIG00000032953) #17	DUSP1 (ENSRBIG00000037066) #18	NEURL1B (ENSRBIG00000037294) #19	SH3PXD2B (ENSRBIG00000036914) #20	UBTD2 (ENSRBIG00000037359) #22	EFCAB9 (ENSRBIG00000031355) #23	ENSRBIG00000030762	STK10 (ENSRBIG00000037834) #24
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000159824.c	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00620000089286	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Vervet Monkey	MODERN SPECIES	15	MSX2 (ENSCSAG00000009496)	NSG2 (ENSCSAG00000009499) #8	C5orf47 (ENSCSAG00000009504)	CPEB4 (ENSCSAG00000009516) #9	BOD1 (ENSCSAG00000009522) #10	STC2 (ENSCSAG00000009529) #11	NKX2-5 (ENSCSAG00000009533) #12	BNIP1 (ENSCSAG00000009541) #13	CREBRF (ENSCSAG00000009545) #14	ATP6V0E1 (ENSCSAG00000009548) #15	ENSCSAG00000009551 ##16	ERGIC1 (ENSCSAG00000009579) #17	DUSP1 (ENSCSAG00000009591) #18	NEURL1B (ENSCSAG00000009597) #19	SH3PXD2B (ENSCSAG00000009606) #20	UBTD2 (ENSCSAG00000009612) #22	EFCAB9 (ENSCSAG00000009621) #23	STK10 (ENSCSAG00000009634) #24	FBXW11 (ENSCSAG00000009643) #25	SMIM23 (ENSCSAG00000009650) #26	ENSCSAG00000009657	FGF18 (ENSCSAG00000009667) #27	NPM1 (ENSCSAG00000009697) ##28	TLX3 (ENSCSAG00000009715) #29	ENSCSAG00000009726	RANBP17 (ENSCSAG00000009868) #31	GABRP (ENSCSAG00000009945) #32	KCNIP1 (ENSCSAG00000009958) #34	KCNMB1 (ENSCSAG00000009964) #33	LCP2 (ENSCSAG00000010046) #35	C5orf58 (ENSCSAG00000010070)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00910000147916	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00620000089286	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Macaca	ANCESTRAL SPECIES	7	ENSGT00910000147916	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.i.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00620000089286	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000159824.c	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00940000154979.s.b.b #10	ENSGT00390000005989.a #11	ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.a	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00620000089286	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.a.a.a	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000062346	MSX2 (ENSMFAG00000056450)	ENSMFAG00000010780	NSG2 (ENSMFAG00000033258) #8	CPEB4 (ENSMFAG00000003075) #9	ENSMFAG00000003066 #10	STC2 (ENSMFAG00000048596) #11	ENSMFAG00000060111	NKX2-5 (ENSMFAG00000034569) #12	BNIP1 (ENSMFAG00000037018) #13	CREBRF (ENSMFAG00000036600) #14	ATP6V0E1 (ENSMFAG00000045429) #15	ERGIC1 (ENSMFAG00000037788) #17	DUSP1 (ENSMFAG00000044045) #18	SH3PXD2B (ENSMFAG00000040954) #20	UBTD2 (ENSMFAG00000052150) #22	EFCAB9 (ENSMFAG00000043157) #23	ENSMFAG00000051726	STK10 (ENSMFAG00000033923) #24	ENSMFAG00000057552	ENSMFAG00000047803	FBXW11 (ENSMFAG00000039918) #25	SMIM23 (ENSMFAG00000039057) #26	ENSMFAG00000039380	FGF18 (ENSMFAG00000064381) #27	NPM1 (ENSMFAG00000043579) ##28	ENSMFAG00000062884	TLX3 (ENSMFAG00000048247) #29	RANBP17 (ENSMFAG00000034347) #31	GABRP (ENSMFAG00000003571) #32	KCNMB1 (ENSMFAG00000002422) #33
Rhesus	MODERN SPECIES	16	MSX2 (ENSMMUG00000004932)	NSG2 (ENSMMUG00000059444) #8	CPEB4 (ENSMMUG00000019926) #9	BOD1 (ENSMMUG00000013793) #10	ENSMMUG00000054693	STC2 (ENSMMUG00000014782) #11	ENSMMUG00000055739	NKX2-5 (ENSMMUG00000064883) #12	BNIP1 (ENSMMUG00000014607) #13	CREBRF (ENSMMUG00000005909) #14	ATP6V0E1 (ENSMMUG00000059290) #15	ERGIC1 (ENSMMUG00000003067) #17	DUSP1 (ENSMMUG00000059336) #18	NEURL1B (ENSMMUG00000008848) #19	SH3PXD2B (ENSMMUG00000010102) #20	UBTD2 (ENSMMUG00000052139) #22	EFCAB9 (ENSMMUG00000059414) #23	ENSMMUG00000057388	STK10 (ENSMMUG00000006811) #24	FBXW11 (ENSMMUG00000016008) #25	SMIM23 (ENSMMUG00000057889) #26	FGF18 (ENSMMUG00000019401) #27	NPM1 (ENSMMUG00000015781) ##28	ENSMMUG00000056310	TLX3 (ENSMMUG00000057846) #29	ENSMMUG00000059105	RANBP17 (ENSMMUG00000015840) #31	GABRP (ENSMMUG00000000570) #32	KCNIP1 (ENSMMUG00000009171) #34	KCNMB1 (ENSMMUG00000060800) #33	LCP2 (ENSMMUG00000014126) #35
Pig-tailed macaque	MODERN SPECIES	566	NSG2 (ENSMNEG00000030122) #8	C5orf47 (ENSMNEG00000036162)	CPEB4 (ENSMNEG00000034689) #9	BOD1 (ENSMNEG00000038516) #10	STC2 (ENSMNEG00000032109) #11	NKX2-5 (ENSMNEG00000016498) #12	BNIP1 (ENSMNEG00000033003) #13	CREBRF (ENSMNEG00000032133) #14	ATP6V0E1 (ENSMNEG00000036422) #15	RPL26L1 (ENSMNEG00000029899) #16	ERGIC1 (ENSMNEG00000031904) #17	DUSP1 (ENSMNEG00000043275) #18	NEURL1B (ENSMNEG00000044968) #19	SH3PXD2B (ENSMNEG00000036165) #20	ENSMNEG00000035122	UBTD2 (ENSMNEG00000031278) #22	EFCAB9 (ENSMNEG00000014910) #23	STK10 (ENSMNEG00000029184) #24	FBXW11 (ENSMNEG00000033472) #25	SMIM23 (ENSMNEG00000029674) #26	ENSMNEG00000044745	FGF18 (ENSMNEG00000039895) #27	NPM1 (ENSMNEG00000039074) ##28	TLX3 (ENSMNEG00000041964) #29	ENSMNEG00000024836	RANBP17 (ENSMNEG00000045556) #31	GABRP (ENSMNEG00000043880) #32	KCNMB1 (ENSMNEG00000038025) #33	KCNIP1 (ENSMNEG00000037144) #34	LCP2 (ENSMNEG00000039031) #35	C5orf58 (ENSMNEG00000045509)
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00910000147916	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00620000089286	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Olive baboon	MODERN SPECIES	15	MSX2 (ENSPANG00000041175)	ENSPANG00000045766	ENSPANG00000019682	CPEB4 (ENSPANG00000009300) #9	BOD1 (ENSPANG00000005513) #10	STC2 (ENSPANG00000045597) #11	NKX2-5 (ENSPANG00000012362) #12	BNIP1 (ENSPANG00000003761) #13	CREBRF (ENSPANG00000013059) #14	ENSPANG00000011468 #15	RPL26L1 (ENSPANG00000012204) #16	ERGIC1 (ENSPANG00000023223) #17	ENSPANG00000049887 #18	NEURL1B (ENSPANG00000001624) #19	SH3PXD2B (ENSPANG00000013857) #20	UBTD2 (ENSPANG00000002422) #22	EFCAB9 (ENSPANG00000003762) #23	STK10 (ENSPANG00000009341) #24	FBXW11 (ENSPANG00000006849) #25	SMIM23 (ENSPANG00000003366) #26	FGF18 (ENSPANG00000017661) #27	NPM1 (ENSPANG00000000217) ##28	TLX3 (ENSPANG00000000216) #29	ENSPANG00000040245	RANBP17 (ENSPANG00000002592) #31	GABRP (ENSPANG00000013183) #32	KCNMB1 (ENSPANG00000008079) #33	KCNIP1 (ENSPANG00000005266) #34	LCP2 (ENSPANG00000008703) #35	C5orf58 (ENSPANG00000003590)	FOXI1 (ENSPANG00000035900) #37
Cercopithecinae_d	ANCESTRAL SPECIES	53	ENSGT00910000147916	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a.d #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b.j #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00620000089286	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153284.a.h.i.a	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Sooty mangabey	MODERN SPECIES	597	ENSCATG00000011643	NSG2 (ENSCATG00000029990) #8	C5orf47 (ENSCATG00000012564)	CPEB4 (ENSCATG00000014550) #9	ENSCATG00000005639 #10	STC2 (ENSCATG00000030924) #11	NKX2-5 (ENSCATG00000031410) #12	BNIP1 (ENSCATG00000043162) #13	CREBRF (ENSCATG00000040516) #14	ATP6V0E1 (ENSCATG00000036579) #15	RPL26L1 (ENSCATG00000029601) #16	ERGIC1 (ENSCATG00000041026) #17	DUSP1 (ENSCATG00000027456) #18	NEURL1B (ENSCATG00000038257) #19	SH3PXD2B (ENSCATG00000043516) #20	UBTD2 (ENSCATG00000032931) #22	EFCAB9 (ENSCATG00000042923) #23	STK10 (ENSCATG00000036488) #24	FBXW11 (ENSCATG00000000142) #25	SMIM23 (ENSCATG00000031141) #26	ENSCATG00000040661	FGF18 (ENSCATG00000040646) #27	NPM1 (ENSCATG00000013107) ##28	TLX3 (ENSCATG00000039358) #29	ENSCATG00000027225	RANBP17 (ENSCATG00000011884) #31	GABRP (ENSCATG00000038559) #32	KCNMB1 (ENSCATG00000029648) #33	KCNIP1 (ENSCATG00000040305) #34	LCP2 (ENSCATG00000014913) #35	C5orf58 (ENSCATG00000034297)
Drill	MODERN SPECIES	960				ENSMLEG00000030320 #10	STC2 (ENSMLEG00000026461) #11	NKX2-5 (ENSMLEG00000000339) #12	BNIP1 (ENSMLEG00000039126) #13	CREBRF (ENSMLEG00000000513) #14	ATP6V0E1 (ENSMLEG00000030149) #15	ENSMLEG00000037483 ##16	ERGIC1 (ENSMLEG00000029804) #17	ENSMLEG00000040155	DUSP1 (ENSMLEG00000039172) #18	NEURL1B (ENSMLEG00000033205) #19	SH3PXD2B (ENSMLEG00000029587) #20	UBTD2 (ENSMLEG00000038379) #22	EFCAB9 (ENSMLEG00000038052) #23	STK10 (ENSMLEG00000041182) #24	FBXW11 (ENSMLEG00000035049) #25	SMIM23 (ENSMLEG00000042760) #26	ENSMLEG00000040662	FGF18 (ENSMLEG00000029867) #27	NPM1 (ENSMLEG00000030928) ##28	TLX3 (ENSMLEG00000041555) #29
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37
Gibbon	MODERN SPECIES	11	ENSNLEG00000033959	NSG2 (ENSNLEG00000000522) #8	C5orf47 (ENSNLEG00000027778)	CPEB4 (ENSNLEG00000000487) #9	BOD1 (ENSNLEG00000000476) #10	STC2 (ENSNLEG00000000463) #11	NKX2-5 (ENSNLEG00000000457) #12	BNIP1 (ENSNLEG00000000453) #13	ENSNLEG00000000442 #14	ENSNLEG00000030031 #15	ERGIC1 (ENSNLEG00000000407) #17	ENSNLEG00000033458	DUSP1 (ENSNLEG00000035887) #18	ENSNLEG00000000392 #19	SH3PXD2B (ENSNLEG00000000384) #20	UBTD2 (ENSNLEG00000000381) #22	EFCAB9 (ENSNLEG00000000378) #23	STK10 (ENSNLEG00000000350) #24	ENSNLEG00000031400	FBXW11 (ENSNLEG00000000338) #25	ENSNLEG00000000336 #26	ENSNLEG00000000334 #27	NPM1 (ENSNLEG00000000304) ##28	TLX3 (ENSNLEG00000000302) #29	RANBP17 (ENSNLEG00000000281) #31	ENSNLEG00000032964	GABRP (ENSNLEG00000000264) #32	KCNIP1 (ENSNLEG00000000256) #34	ENSNLEG00000030707	ENSNLEG00000018628	ENSNLEG00000005166 #33
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37
Orangutan	MODERN SPECIES	18	C5orf47 (ENSPPYG00000016059)	ENSPPYG00000031520 #9	ENSPPYG00000016057 #10	STC2 (ENSPPYG00000031955) #11	ENSPPYG00000039258 #12	BNIP1 (ENSPPYG00000016054) #13	CREBRF (ENSPPYG00000016053) #14	ATP6V0E1 (ENSPPYG00000039284) #15	ENSPPYG00000016051	RPL26L1 (ENSPPYG00000025929) #16	ERGIC1 (ENSPPYG00000016049) #17	DUSP1 (ENSPPYG00000016048) #18	ENSPPYG00000016047	NEURL1B (ENSPPYG00000016046) #19	SH3PXD2B (ENSPPYG00000016044) #20	UBTD2 (ENSPPYG00000040678) #22	EFCAB9 (ENSPPYG00000016042) #23	STK10 (ENSPPYG00000016041) #24	FBXW11 (ENSPPYG00000016040) #25	SMIM23 (ENSPPYG00000016039) #26	FGF18 (ENSPPYG00000016038) #27	NPM1 (ENSPPYG00000016037) ##28	TLX3 (ENSPPYG00000016036) #29	RANBP17 (ENSPPYG00000016035) #31	GABRP (ENSPPYG00000016147) #32	ENSPPYG00000034673	KCNMB1 (ENSPPYG00000016033) #33	KCNIP1 (ENSPPYG00000016034) #34	LCP2 (ENSPPYG00000016030) #35	ENSPPYG00000031742	FOXI1 (ENSPPYG00000031912) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000155723.b	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Gorilla	MODERN SPECIES	18	C5orf47 (ENSGGOG00000013448)	CPEB4 (ENSGGOG00000010097) #9	BOD1 (ENSGGOG00000010925) #10	STC2 (ENSGGOG00000013736) #11	NKX2-5 (ENSGGOG00000017092) #12	BNIP1 (ENSGGOG00000002239) #13	CREBRF (ENSGGOG00000011220) #14	ATP6V0E1 (ENSGGOG00000006701) #15	ENSGGOG00000038246	RPL26L1 (ENSGGOG00000025582) #16	ENSGGOG00000044004	ERGIC1 (ENSGGOG00000008455) #17	DUSP1 (ENSGGOG00000007135) #18	ENSGGOG00000004882 #19	SH3PXD2B (ENSGGOG00000008765) #20	UBTD2 (ENSGGOG00000043610) #22	EFCAB9 (ENSGGOG00000011373) #23	STK10 (ENSGGOG00000012427) #24	FBXW11 (ENSGGOG00000007880) #25	SMIM23 (ENSGGOG00000004301) #26	FGF18 (ENSGGOG00000007226) #27	NPM1 (ENSGGOG00000007220) ##28	ENSGGOG00000023662 #29	ENSGGOG00000042599	RANBP17 (ENSGGOG00000010374) #31	GABRP (ENSGGOG00000003834) #32	KCNMB1 (ENSGGOG00000007162) #33	KCNIP1 (ENSGGOG00000007280) #34	LCP2 (ENSGGOG00000006590) #35	ENSGGOG00000027265	FOXI1 (ENSGGOG00000015780) #37
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000155723.b	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Human	MODERN SPECIES	17	MSX2 (ENSG00000120149)	NSG2 (ENSG00000170091) #8	C5orf47 (ENSG00000185056)	CPEB4 (ENSG00000113742) #9	BOD1 (ENSG00000145919) #10	STC2 (ENSG00000113739) #11	NKX2-5 (ENSG00000183072) #12	BNIP1 (ENSG00000113734) #13	CREBRF (ENSG00000164463) #14	ATP6V0E1 (ENSG00000113732) #15	RPL26L1 (ENSG00000037241) #16	ERGIC1 (ENSG00000113719) #17	DUSP1 (ENSG00000120129) #18	NEURL1B (ENSG00000214357) #19	SH3PXD2B (ENSG00000174705) #20	UBTD2 (ENSG00000168246) #22	EFCAB9 (ENSG00000214360) #23	STK10 (ENSG00000072786) #24	FBXW11 (ENSG00000072803) #25	SMIM23 (ENSG00000185662) #26	FGF18 (ENSG00000156427) #27	NPM1 (ENSG00000181163) ##28	TLX3 (ENSG00000164438) #29	RANBP17 (ENSG00000204764) #31	GABRP (ENSG00000094755) #32	KCNMB1 (ENSG00000145936) #33	KCNIP1 (ENSG00000182132) #34	LCP2 (ENSG00000043462) #35	C5orf58 (ENSG00000234511)	FOXI1 (ENSG00000168269) #37	INSYN2B (ENSG00000204767)
Pan	ANCESTRAL SPECIES	10	ENSGT00940000154998.a.a #9	ENSGT00940000154979.s.a #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000017004.a.b.m.a.b	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000155445.e.a.a	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00910000148172	ENSGT00940000156818 #24	ENSGT00940000155898.c #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000155723.b	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585
Chimpanzee	MODERN SPECIES	18	CPEB4 (ENSPTRG00000017545) #9	BOD1 (ENSPTRG00000017544) #10	STC2 (ENSPTRG00000017543) #11	NKX2-5 (ENSPTRG00000017542) #12	BNIP1 (ENSPTRG00000017541) #13	CREBRF (ENSPTRG00000017540) #14	ATP6V0E1 (ENSPTRG00000017538) #15	ENSPTRG00000041040	RPL26L1 (ENSPTRG00000043990) #16	ENSPTRG00000046007	ERGIC1 (ENSPTRG00000017535) #17	DUSP1 (ENSPTRG00000017534) #18	ENSPTRG00000046003	NEURL1B (ENSPTRG00000033712) #19	SH3PXD2B (ENSPTRG00000017531) #20	UBTD2 (ENSPTRG00000044878) #22	EFCAB9 (ENSPTRG00000034173) #23	ENSPTRG00000050304	STK10 (ENSPTRG00000017527) #24	FBXW11 (ENSPTRG00000017526) #25	SMIM23 (ENSPTRG00000017525) #26	FGF18 (ENSPTRG00000017524) #27	NPM1 (ENSPTRG00000049153) ##28	TLX3 (ENSPTRG00000017522) #29	ENSPTRG00000052692 #30	ENSPTRG00000046140	RANBP17 (ENSPTRG00000028506) #31	GABRP (ENSPTRG00000017520) #32	KCNMB1 (ENSPTRG00000017518) #33	KCNIP1 (ENSPTRG00000017519) #34	LCP2 (ENSPTRG00000017517) #35
Bonobo	MODERN SPECIES	18	CPEB4 (ENSPPAG00000030599) #9	BOD1 (ENSPPAG00000033401) #10	STC2 (ENSPPAG00000042436) #11	NKX2-5 (ENSPPAG00000031047) #12	BNIP1 (ENSPPAG00000029895) #13	CREBRF (ENSPPAG00000039864) #14	ATP6V0E1 (ENSPPAG00000037191) #15	ENSPPAG00000043282	RPL26L1 (ENSPPAG00000029664) #16	ENSPPAG00000036347	ERGIC1 (ENSPPAG00000030828) #17	DUSP1 (ENSPPAG00000028299) #18	ENSPPAG00000030109	ENSPPAG00000014966 #19	SH3PXD2B (ENSPPAG00000028491) #20	UBTD2 (ENSPPAG00000040436) #22	EFCAB9 (ENSPPAG00000037845) #23	ENSPPAG00000041942	STK10 (ENSPPAG00000017062) #24	FBXW11 (ENSPPAG00000041177) #25	SMIM23 (ENSPPAG00000006847) #26	FGF18 (ENSPPAG00000043852) #27	NPM1 (ENSPPAG00000041884) ##28	TLX3 (ENSPPAG00000035866) #29	ENSPPAG00000041342	RANBP17 (ENSPPAG00000041600) #31	GABRP (ENSPPAG00000016335) #32	KCNIP1 (ENSPPAG00000033996) #34	KCNMB1 (ENSPPAG00000038648) #33	LCP2 (ENSPPAG00000035616) #35	FOXI1 (ENSPPAG00000024818) #37
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Tree shrew	MODERN SPECIES	3912																UBTD2 (ENSTBEG00000001787) #22	STK10 (ENSTBEG00000001064) #24	FBXW11 (ENSTBEG00000009311) #25
Glires	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Lagomorpha	ANCESTRAL SPECIES	32	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.b.d ##28	ENSGT00940000153052.c.b.a.a.b.c.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Pika	MODERN SPECIES	4719															ENSOPRG00000013081 #20	ENSOPRG00000013077 #22	ENSOPRG00000018566 #23
Rabbit	MODERN SPECIES	14	MSX2 (ENSOCUG00000009161)	NSG2 (ENSOCUG00000038430) #8	CPEB4 (ENSOCUG00000008971) #9	ENSOCUG00000014283 #10	STC2 (ENSOCUG00000007985) #11	NKX2-5 (ENSOCUG00000000041) #12	BNIP1 (ENSOCUG00000000040) #13	CREBRF (ENSOCUG00000000038) #14	ATP6V0E1 (ENSOCUG00000006174) #15	RPL26L1 (ENSOCUG00000006172) #16	ERGIC1 (ENSOCUG00000029231) #17	DUSP1 (ENSOCUG00000007999) #18	NEURL1B (ENSOCUG00000027790) #19	SH3PXD2B (ENSOCUG00000006784) #20	ENSOCUG00000034187	UBTD2 (ENSOCUG00000005108) #22	EFCAB9 (ENSOCUG00000024250) #23	STK10 (ENSOCUG00000005098) #24	FBXW11 (ENSOCUG00000007739) #25	FGF18 (ENSOCUG00000011124) #27	ENSOCUG00000011117 ##28	TLX3 (ENSOCUG00000000918) #29	RANBP17 (ENSOCUG00000011100) #31	GABRP (ENSOCUG00000008191) #32	KCNMB1 (ENSOCUG00000000539) #33	KCNIP1 (ENSOCUG00000000540) #34	LCP2 (ENSOCUG00000000534) #35	C5orf58 (ENSOCUG00000030888)	FOXI1 (ENSOCUG00000000836) #37	INSYN2B (ENSOCUG00000000834)	ENSOCUG00000031547
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000167072	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.b.b.b.q ##16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Myomorpha	ANCESTRAL SPECIES	28		ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.b.b.b.q ##16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Muroidea	ANCESTRAL SPECIES	10	ENSGT00510000049125	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.b.b.b.q ##16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d.d.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d.d.b.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	15	Parn (ENSMOCG00000022211)	Bfar (ENSMOCG00000015581)	Pla2g10 (ENSMOCG00000005669)	Rrn3 (ENSMOCG00000016697)	Ntan1 (ENSMOCG00000022646)	ENSMOCG00000016638	Mpv17l (ENSMOCG00000016475)	Bmerb1 (ENSMOCG00000018990)	ENSMOCG00000022220	Marf1 (ENSMOCG00000001136)	Nde1 (ENSMOCG00000004322)	Myh11 (ENSMOCG00000001351)	Cep20 (ENSMOCG00000002426)	Abcc1 (ENSMOCG00000001674)	ENSMOCG00000022493 #20	ENSMOCG00000022075 #22	Efcab9 (ENSMOCG00000022547) #23	ENSMOCG00000022759 #24	Fbxw11 (ENSMOCG00000005139) #25	Smim23 (ENSMOCG00000008049) #26	Fgf18 (ENSMOCG00000010978) #27	ENSMOCG00000001485 ##28	Tlx3 (ENSMOCG00000013764) #29	Ranbp17 (ENSMOCG00000007105) #31	Gabrp (ENSMOCG00000022600) #32	Kcnip1 (ENSMOCG00000019706) #34	Kcnmb1 (ENSMOCG00000012254) #33	Lcp2 (ENSMOCG00000012783) #35	Foxi1 (ENSMOCG00000004587) #37	Dock2 (ENSMOCG00000007487)	Insyn2b (ENSMOCG00000022544)
Prairie vole	MODERN SPECIES		Lrr1 (ENSMOCG00000018456)	Rps29 (ENSMOCG00000017681)	Mdga2 (ENSMOCG00000022499)	ENSMOCG00000005109	Rpl10l (ENSMOCG00000009910)	Mis18bp1 (ENSMOCG00000017171)	Fancm (ENSMOCG00000008775)	Fkbp3 (ENSMOCG00000011130)	Prpf39 (ENSMOCG00000009148)	Togaram1 (ENSMOCG00000021755)	Klhl28 (ENSMOCG00000006562)	Gm527 (ENSMOCG00000005543)	ENSMOCG00000015843	Lrfn5 (ENSMOCG00000021045)	ENSMOCG00000014206	ENSMOCG00000013030 #22
Northern American deer mouse	MODERN SPECIES	21	Il9r (ENSPEMG00000015108)	Nsg2 (ENSPEMG00000029190) #8	4930524B15Rik (ENSPEMG00000016302)	Cpeb4 (ENSPEMG00000025728) #9	ENSPEMG00000030821 #10	Stc2 (ENSPEMG00000031170) #11	Nkx2-5 (ENSPEMG00000012263) #12	Bnip1 (ENSPEMG00000014579) #13	Crebrf (ENSPEMG00000019136) #14	Atp6v0e (ENSPEMG00000016171) #15	Ergic1 (ENSPEMG00000011371) #17	ENSPEMG00000029256	Dusp1 (ENSPEMG00000008974) #18	Neurl1b (ENSPEMG00000018647) #19	Sh3pxd2b (ENSPEMG00000011209) #20	Ubtd2 (ENSPEMG00000028774) #22	Efcab9 (ENSPEMG00000012516) #23	Stk10 (ENSPEMG00000016749) #24	Fbxw11 (ENSPEMG00000014614) #25	Smim23 (ENSPEMG00000009648) #26	ENSPEMG00000005862	Fgf18 (ENSPEMG00000027707) #27	ENSPEMG00000010032 ##28	Tlx3 (ENSPEMG00000009002) #29	Ranbp17 (ENSPEMG00000013086) #31	Gabrp (ENSPEMG00000008255) #32	Kcnip1 (ENSPEMG00000007681) #34	Kcnmb1 (ENSPEMG00000025688) #33	Lcp2 (ENSPEMG00000011935) #35	4930469K13Rik (ENSPEMG00000029094)	Foxi1 (ENSPEMG00000015123) #37
Cricetinae	ANCESTRAL SPECIES		ENSGT00510000049125	ENSGT00940000167072	ENSGT00640000091672	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d.d.a.a.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Chinese hamster chok1gshd	MODERN SPECIES	229	Nsg2 (ENSCGRG00001010888) #8	ENSCGRG00001013841	4930524B15Rik (ENSCGRG00001017897)	ENSCGRG00001019946	Cpeb4 (ENSCGRG00001021805) #9	Bod1 (ENSCGRG00001023221) #10	Stc2 (ENSCGRG00001023337) #11	Nkx2-5 (ENSCGRG00001024735) #12	Bnip1 (ENSCGRG00001000805) #13	Crebrf (ENSCGRG00001007231) #14	Atp6v0e (ENSCGRG00001022946) #15	Ergic1 (ENSCGRG00001024104) #17	Dusp1 (ENSCGRG00001019246) #18	Neurl1b (ENSCGRG00001022855) #19	Sh3pxd2b (ENSCGRG00001010764) #20	Ubtd2 (ENSCGRG00001022026) #22	Efcab9 (ENSCGRG00001001253) #23	Stk10 (ENSCGRG00001013751) #24	Fbxw11 (ENSCGRG00001016029) #25	Smim23 (ENSCGRG00001015541) #26	Fgf18 (ENSCGRG00001017188) #27	ENSCGRG00001001985 ##28	Tlx3 (ENSCGRG00001015510) #29	Ranbp17 (ENSCGRG00001015450) #31	ENSCGRG00001012148	Gabrp (ENSCGRG00001018465) #32	Kcnip1 (ENSCGRG00001012407) #34	Kcnmb1 (ENSCGRG00001013776) #33	Lcp2 (ENSCGRG00001017371) #35	Foxi1 (ENSCGRG00001018922) #37	ENSCGRG00001024778
Golden Hamster	MODERN SPECIES	861							Stc2 (ENSMAUG00000008254) #11	Nkx2-5 (ENSMAUG00000007694) #12	Bnip1 (ENSMAUG00000016525) #13	Crebrf (ENSMAUG00000016495) #14	Atp6v0e (ENSMAUG00000013929) #15	Ergic1 (ENSMAUG00000019097) #17	Dusp1 (ENSMAUG00000008804) #18	Neurl1b (ENSMAUG00000009175) #19	ENSMAUG00000001948 #20	Ubtd2 (ENSMAUG00000000209) #22	Efcab9 (ENSMAUG00000012647) #23
Murinae	ANCESTRAL SPECIES	7	ENSGT00390000002628	ENSGT00510000049125	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Mus	ANCESTRAL SPECIES	2		ENSGT00390000005989.a #11	ENSGT00940000154979 #10	ENSGT00940000154998.a.a #9	ENSGT00640000091672	ENSGT00390000000483.a.a #8	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00970000195169	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000159080	ENSGT00390000005989.a #11	ENSGT00940000154979 #10	ENSGT00940000154998.a.a #9	ENSGT00640000091672	ENSGT00390000000483.a.a #8	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00970000195169	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000005989.a #11	ENSGT00940000154979 #10	ENSGT00940000154998.a.a #9	ENSGT00640000091672	ENSGT00390000000483.a.a #8	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000162598.c	ENSGT00940000154590	ENSGT00940000162598.d	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37	ENSGT00530000063787.A
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000005989.a #11	ENSGT00940000154979 #10	ENSGT00940000154998.a.a #9	ENSGT00640000091672	ENSGT00390000000483.a.a #8	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000162598.c	ENSGT00940000154590	ENSGT00940000162598.d	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.d.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT01060000252083	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000172454	ENSGT00940000161316 #37
Steppe mouse	MODERN SPECIES	3235	ENSMSIG00000024561 #10	Cpeb4 (ENSMSIG00000024456) #9	ENSMSIG00000024450	4930524B15Rik (ENSMSIG00000024432)	ENSMSIG00000024413	Il9r (ENSMSIG00000024354)	ENSMSIG00000024344	Rhbdf1 (ENSMSIG00000024323)	Mpg (ENSMSIG00000024316)	Nprl3 (ENSMSIG00000024256)	Hba-x (ENSMSIG00000024240)	ENSMSIG00000024228	ENSMSIG00000024204	Hbq1a (ENSMSIG00000023834)	Sh3pxd2b (ENSMSIG00000023801) #20	Ubtd2 (ENSMSIG00000023792) #22	Efcab9 (ENSMSIG00000023781) #23	Stk10 (ENSMSIG00000023716) #24	Fbxw11 (ENSMSIG00000023614) #25	Smim23 (ENSMSIG00000023592) #26	Fgf18 (ENSMSIG00000023572) #27	Npm1 (ENSMSIG00000023445) ##28	Tlx3 (ENSMSIG00000023425) #29	ENSMSIG00000023419	Ranbp17 (ENSMSIG00000023281) #31	Gabrp (ENSMSIG00000023250) #32	ENSMSIG00000023232	Kcnip1 (ENSMSIG00000023156) #34	Kcnmb1 (ENSMSIG00000023135) #33	ENSMSIG00000022989 #35	4930469K13Rik (ENSMSIG00000022972)
spretus	MODERN SPECIES	2	Erlec1 (MGP_SPRETEiJ_G0017012)	Chac2 (MGP_SPRETEiJ_G0017013)	Stc2 (MGP_SPRETEiJ_G0017014) #11	Bod1 (MGP_SPRETEiJ_G0017015) #10	Cpeb4 (MGP_SPRETEiJ_G0017016) #9	4930524B15Rik (MGP_SPRETEiJ_G0017017)	Nsg2 (MGP_SPRETEiJ_G0017018) #8	MGP_SPRETEiJ_G0017019	Il9r (MGP_SPRETEiJ_G0017020)	MGP_SPRETEiJ_G0017021	Rhbdf1 (MGP_SPRETEiJ_G0017022)	Nprl3 (MGP_SPRETEiJ_G0017023)	Mpg (MGP_SPRETEiJ_G0017024)	MGP_SPRETEiJ_G0017025	Sh3pxd2b (MGP_SPRETEiJ_G0017026) #20	Ubtd2 (MGP_SPRETEiJ_G0017027) #22	Efcab9 (MGP_SPRETEiJ_G0017028) #23	Stk10 (MGP_SPRETEiJ_G0017029) #24	Fbxw11 (MGP_SPRETEiJ_G0017030) #25	Smim23 (MGP_SPRETEiJ_G0017031) #26	Fgf18 (MGP_SPRETEiJ_G0017032) #27	Npm1 (MGP_SPRETEiJ_G0017033) ##28	Tlx3 (MGP_SPRETEiJ_G0017034) #29	MGP_SPRETEiJ_G0017035 #31	MGP_SPRETEiJ_G0017036	Gabrp (MGP_SPRETEiJ_G0017037) #32	MGP_SPRETEiJ_G0017038	Kcnip1 (MGP_SPRETEiJ_G0017039) #34	Kcnmb1 (MGP_SPRETEiJ_G0017040) #33	Lcp2 (MGP_SPRETEiJ_G0017041) #35	Foxi1 (MGP_SPRETEiJ_G0017042) #37
Mouse	MODERN SPECIES	2	Bod1 (ENSMUSG00000044502) #10	Cpeb4 (ENSMUSG00000020300) #9	4930524B15Rik (ENSMUSG00000020299)	Nsg2 (ENSMUSG00000020297) #8	Il9r (ENSMUSG00000020279)	Snrnp25 (ENSMUSG00000040767)	Rhbdf1 (ENSMUSG00000020282)	Nprl3 (ENSMUSG00000020289)	Mpg (ENSMUSG00000020287)	Hba-x (ENSMUSG00000055609)	Hba-a1 (ENSMUSG00000069919)	Hbq1b (ENSMUSG00000073063)	Hba-a2 (ENSMUSG00000069917)	Hbq1a (ENSMUSG00000020295)	Sh3pxd2b (ENSMUSG00000040711) #20	Ubtd2 (ENSMUSG00000044949) #22	Efcab9 (ENSMUSG00000044056) #23	Stk10 (ENSMUSG00000020272) #24	Fbxw11 (ENSMUSG00000020271) #25	Smim23 (ENSMUSG00000020270) #26	Fgf18 (ENSMUSG00000057967) #27	Npm1 (ENSMUSG00000057113) ##28	Tlx3 (ENSMUSG00000040610) #29	Ranbp17 (ENSMUSG00000040594) #31	Gabrp (ENSMUSG00000020159) #32	Kcnip1 (ENSMUSG00000053519) #34	Kcnmb1 (ENSMUSG00000020155) #33	4930469K13Rik (ENSMUSG00000085684)	Lcp2 (ENSMUSG00000002699) #35	Foxi1 (ENSMUSG00000047861) #37	Dock2 (ENSMUSG00000020143)
Ryukyu mouse	MODERN SPECIES	2	Bod1 (MGP_CAROLIEiJ_G0016171) #10	Cpeb4 (MGP_CAROLIEiJ_G0016172) #9	4930524B15Rik (MGP_CAROLIEiJ_G0016173)	Nsg2 (MGP_CAROLIEiJ_G0016174) #8	Il9r (MGP_CAROLIEiJ_G0016175)	MGP_CAROLIEiJ_G0016176	Rhbdf1 (MGP_CAROLIEiJ_G0016177)	Nprl3 (MGP_CAROLIEiJ_G0016178)	Mpg (MGP_CAROLIEiJ_G0016179)	MGP_CAROLIEiJ_G0016180	MGP_CAROLIEiJ_G0016181	MGP_CAROLIEiJ_G0016182	MGP_CAROLIEiJ_G0016183	MGP_CAROLIEiJ_G0016184	Sh3pxd2b (MGP_CAROLIEiJ_G0016185) #20	Ubtd2 (MGP_CAROLIEiJ_G0016186) #22	Efcab9 (MGP_CAROLIEiJ_G0016187) #23	Stk10 (MGP_CAROLIEiJ_G0016188) #24	Fbxw11 (MGP_CAROLIEiJ_G0016189) #25	Smim23 (MGP_CAROLIEiJ_G0016190) #26	Fgf18 (MGP_CAROLIEiJ_G0016191) #27	Npm1 (MGP_CAROLIEiJ_G0016192) ##28	Tlx3 (MGP_CAROLIEiJ_G0016193) #29	Ranbp17 (MGP_CAROLIEiJ_G0016194) #31	MGP_CAROLIEiJ_G0016195	Gabrp (MGP_CAROLIEiJ_G0016196) #32	MGP_CAROLIEiJ_G0016197	Kcnip1 (MGP_CAROLIEiJ_G0016198) #34	Kcnmb1 (MGP_CAROLIEiJ_G0016199) #33	Lcp2 (MGP_CAROLIEiJ_G0016200) #35	Foxi1 (MGP_CAROLIEiJ_G0016201) #37
Shrew mouse	MODERN SPECIES	5	Cpeb4 (MGP_PahariEiJ_G0017307) #9	4930524B15Rik (MGP_PahariEiJ_G0017308)	Nsg2 (MGP_PahariEiJ_G0017309) #8	MGP_PahariEiJ_G0017310	Il9r (MGP_PahariEiJ_G0017311)	MGP_PahariEiJ_G0017312	Rhbdf1 (MGP_PahariEiJ_G0017313)	Nprl3 (MGP_PahariEiJ_G0017314)	MGP_PahariEiJ_G0017315	MGP_PahariEiJ_G0017316	MGP_PahariEiJ_G0017317	MGP_PahariEiJ_G0017318	MGP_PahariEiJ_G0017319	MGP_PahariEiJ_G0017320	Sh3pxd2b (MGP_PahariEiJ_G0017321) #20	Ubtd2 (MGP_PahariEiJ_G0017322) #22	Efcab9 (MGP_PahariEiJ_G0017323) #23	Stk10 (MGP_PahariEiJ_G0017324) #24	Fbxw11 (MGP_PahariEiJ_G0017325) #25	Smim23 (MGP_PahariEiJ_G0017326) #26	Fgf18 (MGP_PahariEiJ_G0017327) #27	MGP_PahariEiJ_G0017328 ##28	Tlx3 (MGP_PahariEiJ_G0017329) #29	Ranbp17 (MGP_PahariEiJ_G0017330) #31	MGP_PahariEiJ_G0017331	Gabrp (MGP_PahariEiJ_G0017332) #32	MGP_PahariEiJ_G0017333	MGP_PahariEiJ_G0017334 #34	Kcnmb1 (MGP_PahariEiJ_G0017335) #33	Lcp2 (MGP_PahariEiJ_G0017336) #35	Foxi1 (MGP_PahariEiJ_G0017337) #37
Rat	MODERN SPECIES	1	Snrnp25 (ENSRNOG00000020626)	Il9r (ENSRNOG00000020630)	Nsg2 (ENSRNOG00000020644) #8	RGD1311343 (ENSRNOG00000027852)	Cpeb4 (ENSRNOG00000033169) #9	Bod1 (ENSRNOG00000020717) #10	Stc2 (ENSRNOG00000020729) #11	Nkx2-5 (ENSRNOG00000020747) #12	Bnip1 (ENSRNOG00000020753) #13	Crebrf (ENSRNOG00000020769) #14	Atp6v0e1 (ENSRNOG00000003269) #15	Ergic1 (ENSRNOG00000003508) #17	ENSRNOG00000069024 #18	Neurl1b (ENSRNOG00000027606) #19	Sh3pxd2b (ENSRNOG00000004063) #20	Ubtd2 (ENSRNOG00000004137) #22	Efcab9 (ENSRNOG00000004142) #23	Stk10 (ENSRNOG00000004217) #24	ENSRNOG00000066039	Fbxw11 (ENSRNOG00000004395) #25	Smim23 (ENSRNOG00000027196) #26	Fgf18 (ENSRNOG00000048389) #27	Npm1 (ENSRNOG00000004616) ##28	Tlx3 (ENSRNOG00000004976) #29	Ranbp17 (ENSRNOG00000005042) #31	Gabrp (ENSRNOG00000032417) #32	Kcnip1 (ENSRNOG00000005365) #34	AABR07029262.1 (ENSRNOG00000029706)	Kcnmb1 (ENSRNOG00000005465) #33	Lcp2 (ENSRNOG00000005620) #35	C10H5orf58 (ENSRNOG00000068310)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1546	Nsg2 (ENSNGAG00000013688) #8	4930524B15Rik (ENSNGAG00000012324)	Cpeb4 (ENSNGAG00000010735) #9	Bod1 (ENSNGAG00000006127) #10	ENSNGAG00000003484	Stc2 (ENSNGAG00000016574) #11	Nkx2-5 (ENSNGAG00000016164) #12	Bnip1 (ENSNGAG00000019475) #13	ENSNGAG00000009349 #14	ENSNGAG00000003294 #15	ENSNGAG00000002828 ##16	Ergic1 (ENSNGAG00000020608) #17	Dusp1 (ENSNGAG00000019520) #18	Neurl1b (ENSNGAG00000018472) #19	Sh3pxd2b (ENSNGAG00000000827) #20	Ubtd2 (ENSNGAG00000000104) #22	Efcab9 (ENSNGAG00000019506) #23	Stk10 (ENSNGAG00000019942) #24	Fbxw11 (ENSNGAG00000006880) #25	Smim23 (ENSNGAG00000001372) #26	Fgf18 (ENSNGAG00000001054) #27	ENSNGAG00000016679 #28	Tlx3 (ENSNGAG00000011712) #29	Ranbp17 (ENSNGAG00000014221) #31	Gabrp (ENSNGAG00000017036) #32	Kcnip1 (ENSNGAG00000010312) #34	Kcnmb1 (ENSNGAG00000005867) #33	Lcp2 (ENSNGAG00000008561) #35	Foxi1 (ENSNGAG00000019108) #37	Insyn2b (ENSNGAG00000014504)
Lesser Egyptian jerboa	MODERN SPECIES	116	Drd1 (ENSJJAG00000014282)	Dusp1 (ENSJJAG00000010442) #18	Ergic1 (ENSJJAG00000006842) #17	ENSJJAG00000017961 #15	ENSJJAG00000017400 #14	ENSJJAG00000016719 #14	ENSJJAG00000016444 #13	Nkx2-5 (ENSJJAG00000015156) #12	Stc2 (ENSJJAG00000012335) #11	Bod1 (ENSJJAG00000007832) #10	Cpeb4 (ENSJJAG00000021518) #9	Nsg2 (ENSJJAG00000020822) #8	Msx2 (ENSJJAG00000016806)	Neurl1b (ENSJJAG00000016269) #19	Sh3pxd2b (ENSJJAG00000013982) #20	Ubtd2 (ENSJJAG00000010668) #22	Efcab9 (ENSJJAG00000009458) #23	Stk10 (ENSJJAG00000023041) #24	ENSJJAG00000021804 #25	Smim23 (ENSJJAG00000017456) #26	Fgf18 (ENSJJAG00000016780) #27	ENSJJAG00000014455 ##28	Tlx3 (ENSJJAG00000010676) #29	Ranbp17 (ENSJJAG00000004292) #31	Gabrp (ENSJJAG00000024063) #32	Kcnip1 (ENSJJAG00000022582) #34	Kcnmb1 (ENSJJAG00000019472) #33	Lcp2 (ENSJJAG00000007933) #35	Foxi1 (ENSJJAG00000022048) #37
Kangaroo rat	MODERN SPECIES	431															Sh3pxd2b (ENSDORG00000003937) #20	Ubtd2 (ENSDORG00000026096) #22	Efcab9 (ENSDORG00000010658) #23	Stk10 (ENSDORG00000009303) #24	Fbxw11 (ENSDORG00000009769) #25	ENSDORG00000026619	Fgf18 (ENSDORG00000025835) #27	ENSDORG00000028337 ##28	Ranbp17 (ENSDORG00000001411) #31	Gabrp (ENSDORG00000012082) #32	Kcnip1 (ENSDORG00000008211) #34	Kcnmb1 (ENSDORG00000023698) #33	ENSDORG00000016444 #35	Dock2 (ENSDORG00000006519)	Insyn2b (ENSDORG00000026025)	Spdl1 (ENSDORG00000006325)	Slit3 (ENSDORG00000024863)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Sciuridae	ANCESTRAL SPECIES	33	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.b.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Marmotini	ANCESTRAL SPECIES	38	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.b.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00390000010491.f.b	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37
Alpin marmot	MODERN SPECIES	31	SFXN1 (ENSMMMG00000009889)	DRD1 (ENSMMMG00000009915)	MSX2 (ENSMMMG00000009968)	NSG2 (ENSMMMG00000009989) #8	CPEB4 (ENSMMMG00000010044) #9	ENSMMMG00000010091 #10	STC2 (ENSMMMG00000010105) #11	NKX2-5 (ENSMMMG00000010122) #12	BNIP1 (ENSMMMG00000010131) #13	CREBRF (ENSMMMG00000010165) #14	RPL26L1 (ENSMMMG00000010196) #16	ERGIC1 (ENSMMMG00000010202) #17	ENSMMMG00000010217 #18	NEURL1B (ENSMMMG00000010222) #19	SH3PXD2B (ENSMMMG00000010235) #20	UBTD2 (ENSMMMG00000010264) #22	ENSMMMG00000010272 #23	STK10 (ENSMMMG00000010286) #24	FBXW11 (ENSMMMG00000010309) #25	SMIM23 (ENSMMMG00000010399) #26	ENSMMMG00000010418 #27	ENSMMMG00000010435 ##28	TLX3 (ENSMMMG00000010459) #29	RANBP17 (ENSMMMG00000010468) #31	GABRP (ENSMMMG00000010504) #32	KCNIP1 (ENSMMMG00000010524) #34	ENSMMMG00000010588	KCNMB1 (ENSMMMG00000010599) #33	LCP2 (ENSMMMG00000010608) #35	C5orf58 (ENSMMMG00000010701)	FOXI1 (ENSMMMG00000010708) #37
Marmotini_b	ANCESTRAL SPECIES	127	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.b.b.b.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00390000010491.f.b	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37
Squirrel	MODERN SPECIES	209	DRD1 (ENSSTOG00000029229)	MSX2 (ENSSTOG00000000399)	NSG2 (ENSSTOG00000011148) #8	CPEB4 (ENSSTOG00000020645) #9	ENSSTOG00000030887 #10	STC2 (ENSSTOG00000004413) #11	NKX2-5 (ENSSTOG00000004407) #12	BNIP1 (ENSSTOG00000004393) #13	CREBRF (ENSSTOG00000004368) #14	ATP6V0E1 (ENSSTOG00000025255) #15	RPL26L1 (ENSSTOG00000026876) #16	ERGIC1 (ENSSTOG00000025246) #17	DUSP1 (ENSSTOG00000023698) #18	NEURL1B (ENSSTOG00000025420) #19	SH3PXD2B (ENSSTOG00000028124) #20	UBTD2 (ENSSTOG00000014298) #22	EFCAB9 (ENSSTOG00000020218) #23	STK10 (ENSSTOG00000026208) #24	FBXW11 (ENSSTOG00000023506) #25	SMIM23 (ENSSTOG00000024706) #26	FGF18 (ENSSTOG00000023666) #27	ENSSTOG00000014732 ##28	TLX3 (ENSSTOG00000026927) #29	RANBP17 (ENSSTOG00000014700) #31	ENSSTOG00000014692 #32	KCNIP1 (ENSSTOG00000004193) #34	KCNMB1 (ENSSTOG00000021835) #33	LCP2 (ENSSTOG00000016525) #35	FOXI1 (ENSSTOG00000016524) #37	DOCK2 (ENSSTOG00000028655)	INSYN2B (ENSSTOG00000016521)
Arctic ground squirrel	MODERN SPECIES	242							STC2 (ENSUPAG00010022254) #11	NKX2-5 (ENSUPAG00010022252) #12	BNIP1 (ENSUPAG00010022250) #13	CREBRF (ENSUPAG00010022247) #14	ATP6V0E1 (ENSUPAG00010022244) #15	RPL26L1 (ENSUPAG00010022239) #16	ERGIC1 (ENSUPAG00010022238) #17	NEURL1B (ENSUPAG00010022219) #19	SH3PXD2B (ENSUPAG00010022216) #20	UBTD2 (ENSUPAG00010022213) #22	EFCAB9 (ENSUPAG00010022210) #23	STK10 (ENSUPAG00010022207) #24	ENSUPAG00010022184 #25	SMIM23 (ENSUPAG00010022182) #26	FGF18 (ENSUPAG00010022179) #27	NPM1 (ENSUPAG00010022177) ##28	TLX3 (ENSUPAG00010022175) #29	RANBP17 (ENSUPAG00010022169) #31	GABRP (ENSUPAG00010022164) #32	KCNIP1 (ENSUPAG00010022160) #34	ENSUPAG00010022158	KCNMB1 (ENSUPAG00010022156) #33	LCP2 (ENSUPAG00010022148) #35	C5orf58 (ENSUPAG00010022147)	FOXI1 (ENSUPAG00010022146) #37
Eurasian red squirrel	MODERN SPECIES	15	MSX2 (ENSSVLG00005012101)	NSG2 (ENSSVLG00005012146) #8	C5orf47 (ENSSVLG00005012218)	CPEB4 (ENSSVLG00005012332) #9	ENSSVLG00005012611 #10	STC2 (ENSSVLG00005012797) #11	NKX2-5 (ENSSVLG00005012867) #12	BNIP1 (ENSSVLG00005012932) #13	CREBRF (ENSSVLG00005013005) #14	ATP6V0E1 (ENSSVLG00005013162) #15	RPL26L1 (ENSSVLG00005013228) #16	ERGIC1 (ENSSVLG00005013430) #17	DUSP1 (ENSSVLG00005013587) #18	NEURL1B (ENSSVLG00005013785) #19	SH3PXD2B (ENSSVLG00005013894) #20	UBTD2 (ENSSVLG00005013934) #22	EFCAB9 (ENSSVLG00005013993) #23	STK10 (ENSSVLG00005014068) #24	FBXW11 (ENSSVLG00005014207) #25	FGF18 (ENSSVLG00005014519) #27	ENSSVLG00005014590 ##28	TLX3 (ENSSVLG00005014955) #29	RANBP17 (ENSSVLG00005015018) #31	GABRP (ENSSVLG00005015323) #32	KCNIP1 (ENSSVLG00005015593) #34	KCNMB1 (ENSSVLG00005015902) #33	LCP2 (ENSSVLG00005015956) #35	C5orf58 (ENSSVLG00005016377)	FOXI1 (ENSSVLG00005016401) #37	DOCK2 (ENSSVLG00005016455)	INSYN2B (ENSSVLG00005016909)
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Hystricomorpha_a	ANCESTRAL SPECIES	28	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Guinea pig	MODERN SPECIES	17	DRD1 (ENSCPOG00000039492)	MSX2 (ENSCPOG00000038944)	NSG2 (ENSCPOG00000037038) #8	CPEB4 (ENSCPOG00000015530) #9	ENSCPOG00000026033 #10	STC2 (ENSCPOG00000034039) #11	NKX2-5 (ENSCPOG00000026347) #12	BNIP1 (ENSCPOG00000006752) #13	CREBRF (ENSCPOG00000014384) #14	ATP6V0E1 (ENSCPOG00000040227) #15	RPL26L1 (ENSCPOG00000012188) #16	ERGIC1 (ENSCPOG00000012183) #17	DUSP1 (ENSCPOG00000013344) #18	NEURL1B (ENSCPOG00000040777) #19	SH3PXD2B (ENSCPOG00000039072) #20	UBTD2 (ENSCPOG00000034425) #22	EFCAB9 (ENSCPOG00000026758) #23	STK10 (ENSCPOG00000006502) #24	FBXW11 (ENSCPOG00000009582) #25	SMIM23 (ENSCPOG00000006672) #26	FGF18 (ENSCPOG00000006088) #27	TLX3 (ENSCPOG00000024190) #29	ENSCPOG00000032195	RANBP17 (ENSCPOG00000005628) #31	GABRP (ENSCPOG00000039299) #32	KCNIP1 (ENSCPOG00000014295) #34	KCNMB1 (ENSCPOG00000036105) #33	LCP2 (ENSCPOG00000002851) #35	FOXI1 (ENSCPOG00000019611) #37	INSYN2B (ENSCPOG00000010850)	DOCK2 (ENSCPOG00000010822)
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Long-tailed chinchilla	MODERN SPECIES	115	MSX2 (ENSCLAG00000014001)	NSG2 (ENSCLAG00000014316) #8	CPEB4 (ENSCLAG00000013156) #9	ENSCLAG00000016125 #10	ENSCLAG00000014408	STC2 (ENSCLAG00000013045) #11	NKX2-5 (ENSCLAG00000013992) #12	BNIP1 (ENSCLAG00000015919) #13	CREBRF (ENSCLAG00000014588) #14	ATP6V0E1 (ENSCLAG00000014664) #15	RPL26L1 (ENSCLAG00000014524) #16	ERGIC1 (ENSCLAG00000014304) #17	DUSP1 (ENSCLAG00000013473) #18	NEURL1B (ENSCLAG00000014210) #19	SH3PXD2B (ENSCLAG00000015389) #20	UBTD2 (ENSCLAG00000015134) #22	EFCAB9 (ENSCLAG00000013040) #23	STK10 (ENSCLAG00000015147) #24	FBXW11 (ENSCLAG00000013691) #25	SMIM23 (ENSCLAG00000012177) #26	FGF18 (ENSCLAG00000013051) #27	ENSCLAG00000014392 ##28	TLX3 (ENSCLAG00000013094) #29	RANBP17 (ENSCLAG00000013185) #31	GABRP (ENSCLAG00000012510) #32	KCNIP1 (ENSCLAG00000013854) #34	KCNMB1 (ENSCLAG00000014418) #33	LCP2 (ENSCLAG00000015940) #35	FOXI1 (ENSCLAG00000014060) #37	INSYN2B (ENSCLAG00000013576)	DOCK2 (ENSCLAG00000014012)
Degu	MODERN SPECIES	253	NSG2 (ENSODEG00000001862) #8	CPEB4 (ENSODEG00000001934) #9	ENSODEG00000001973 #10	ENSODEG00000002042	ENSODEG00000018739	STC2 (ENSODEG00000002102) #11	NKX2-5 (ENSODEG00000002184) #12	BNIP1 (ENSODEG00000002196) #13	CREBRF (ENSODEG00000002364) #14	ATP6V0E1 (ENSODEG00000001083) #15	ERGIC1 (ENSODEG00000001101) #17	DUSP1 (ENSODEG00000001126) #18	NEURL1B (ENSODEG00000001134) #19	ENSODEG00000001166	SH3PXD2B (ENSODEG00000001294) #20	UBTD2 (ENSODEG00000001390) #22	EFCAB9 (ENSODEG00000001416) #23	STK10 (ENSODEG00000001477) #24	FBXW11 (ENSODEG00000001754) #25	SMIM23 (ENSODEG00000001818) #26
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000049916	C5orf47 (ENSHGLG00000040572)	CPEB4 (ENSHGLG00000008897) #9	ENSHGLG00000041881 #10	STC2 (ENSHGLG00000017592) #11	NKX2-5 (ENSHGLG00000017269) #12	BNIP1 (ENSHGLG00000018031) #13	ENSHGLG00000017817 #14	ENSHGLG00000021190	ENSHGLG00000018219 #15	ENSHGLG00000017100	ERGIC1 (ENSHGLG00000050911) #17	DUSP1 (ENSHGLG00000012633) #18	NEURL1B (ENSHGLG00000039883) #19	SH3PXD2B (ENSHGLG00000009542) #20	UBTD2 (ENSHGLG00000044520) #22	EFCAB9 (ENSHGLG00000006358) #23	STK10 (ENSHGLG00000007426) #24	ENSHGLG00000048340	FBXW11 (ENSHGLG00000010874) #25	ENSHGLG00000032517	SMIM23 (ENSHGLG00000009367) #26	ENSHGLG00000040705	FGF18 (ENSHGLG00000049396) #27	NPM1 (ENSHGLG00000013669) ##28	ENSHGLG00000015459	TLX3 (ENSHGLG00000014254) #29	RANBP17 (ENSHGLG00000014605) #31	ENSHGLG00000035784	GABRP (ENSHGLG00000033733) #32	KCNIP1 (ENSHGLG00000013570) #34
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156641 #22
Common shrew	MODERN SPECIES	8720																UBTD2 (ENSSARG00000004915) #22
Hedgehog	MODERN SPECIES	6321																UBTD2 (ENSEEUG00000005461) #22
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Megabat	MODERN SPECIES	2086															SH3PXD2B (ENSPVAG00000001582) #20	UBTD2 (ENSPVAG00000001581) #22
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Microbat	MODERN SPECIES	1479														NEURL1B (ENSMLUG00000026971) #19	ENSMLUG00000015005 #20	UBTD2 (ENSMLUG00000003394) #22	EFCAB9 (ENSMLUG00000030111) #23	STK10 (ENSMLUG00000006311) #24	FBXW11 (ENSMLUG00000006302) #25
Greater horseshoe bat	MODERN SPECIES	16	MSX2 (ENSRFEG00010007947)	NSG2 (ENSRFEG00010007915) #8	C5orf47 (ENSRFEG00010007860)	CPEB4 (ENSRFEG00010007464) #9	ENSRFEG00010007368 #10	STC2 (ENSRFEG00010007301) #11	NKX2-5 (ENSRFEG00010007273) #12	BNIP1 (ENSRFEG00010007189) #13	CREBRF (ENSRFEG00010007123) #14	ENSRFEG00010007076 #15	RPL26L1 (ENSRFEG00010007037) #16	ERGIC1 (ENSRFEG00010006938) #17	DUSP1 (ENSRFEG00010006882) #18	NEURL1B (ENSRFEG00010006802) #19	SH3PXD2B (ENSRFEG00010006731) #20	UBTD2 (ENSRFEG00010006696) #22	EFCAB9 (ENSRFEG00010006675) #23	STK10 (ENSRFEG00010006622) #24	FBXW11 (ENSRFEG00010006429) #25	FGF18 (ENSRFEG00010006277) #27	ENSRFEG00010006113 ##28	TLX3 (ENSRFEG00010005948) #29	RANBP17 (ENSRFEG00010005910) #31	ENSRFEG00010005874	GABRP (ENSRFEG00010005792) #32	KCNMB1 (ENSRFEG00010020917) #33	KCNIP1 (ENSRFEG00010020846) #34	LCP2 (ENSRFEG00010020758) #35	C5orf58 (ENSRFEG00010020729)	FOXI1 (ENSRFEG00010020710) #37	INSYN2B (ENSRFEG00010020694)
Equus	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00950000183120.e.b.a.a.b.b.a.b	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.w ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37
Donkey	MODERN SPECIES	29	DRD1 (ENSEASG00005026731)	MSX2 (ENSEASG00005036074)	ENSEASG00005025007	CPEB4 (ENSEASG00005011952) #9	ENSEASG00005011948 #10	STC2 (ENSEASG00005024262) #11	NKX2-5 (ENSEASG00005011942) #12	BNIP1 (ENSEASG00005027404) #13	CREBRF (ENSEASG00005011938) #14	ATP6V0E1 (ENSEASG00005011936) #15	RPL26L1 (ENSEASG00005011935) #16	ERGIC1 (ENSEASG00005011934) #17	DUSP1 (ENSEASG00005011932) #18	NEURL1B (ENSEASG00005028285) #19	SH3PXD2B (ENSEASG00005011927) #20	UBTD2 (ENSEASG00005028770) #22	EFCAB9 (ENSEASG00005011925) #23	STK10 (ENSEASG00005011922) #24	FBXW11 (ENSEASG00005011915) #25	SMIM23 (ENSEASG00005024362) #26	ENSEASG00005011908	FGF18 (ENSEASG00005033570) #27	ENSEASG00005011903 ##28	TLX3 (ENSEASG00005011900) #29	RANBP17 (ENSEASG00005010605) #31	GABRP (ENSEASG00005013457) #32	KCNIP1 (ENSEASG00005013452) #34	KCNMB1 (ENSEASG00005013450) #33	LCP2 (ENSEASG00005013437) #35	C5orf58 (ENSEASG00005025476)	FOXI1 (ENSEASG00005036642) #37
Horse	MODERN SPECIES	5	MSX2 (ENSECAG00000011749)	NSG2 (ENSECAG00000013801) #8	C14H5orf47 (ENSECAG00000015624)	CPEB4 (ENSECAG00000016921) #9	ENSECAG00000021784 #10	STC2 (ENSECAG00000022263) #11	NKX2-5 (ENSECAG00000023495) #12	BNIP1 (ENSECAG00000023543) #13	CREBRF (ENSECAG00000024559) #14	RPL26L1 (ENSECAG00000000869) #15	ENSECAG00000059561 ##16	ERGIC1 (ENSECAG00000007541) #17	DUSP1 (ENSECAG00000009958) #18	NEURL1B (ENSECAG00000039619) #19	SH3PXD2B (ENSECAG00000009968) #20	UBTD2 (ENSECAG00000038912) #22	EFCAB9 (ENSECAG00000015586) #23	STK10 (ENSECAG00000016265) #24	FBXW11 (ENSECAG00000011756) #25	SMIM23 (ENSECAG00000018524) #26	ENSECAG00000049830	ENSECAG00000003655	FGF18 (ENSECAG00000030850) #27	NPM1 (ENSECAG00000021950) ##28	TLX3 (ENSECAG00000007840) #29	RANBP17 (ENSECAG00000008393) #31	GABRP (ENSECAG00000014418) #32	ENSECAG00000050403	KCNIP1 (ENSECAG00000019400) #34	KCNMB1 (ENSECAG00000021360) #33	LCP2 (ENSECAG00000021603) #35
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Ursidae	ANCESTRAL SPECIES	24	ENSGT00390000000483.a.a #8	ENSGT00940000167072	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.a.b.b.b ##16	ENSGT00390000014165.d ##16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501.a #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00510000047951
Ursus	ANCESTRAL SPECIES	10	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00940000167072	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.d ##16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501.a #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000161316 #37	ENSGT01100000266992	ENSGT00510000047951
Polar bear	MODERN SPECIES	179	CPLX2 (ENSUMAG00000024512)	HRH2 (ENSUMAG00000024513)	SFXN1 (ENSUMAG00000024515)	DRD1 (ENSUMAG00000024516)	MSX2 (ENSUMAG00000024517)	ENSUMAG00000024518	CPEB4 (ENSUMAG00000024519) #9	STC2 (ENSUMAG00000024523) #11	BNIP1 (ENSUMAG00000024525) #13	CREBRF (ENSUMAG00000024526) #14	ATP6V0E1 (ENSUMAG00000024527) #15	ENSUMAG00000024528 ##16	ERGIC1 (ENSUMAG00000024529) #17	DUSP1 (ENSUMAG00000024530) #18	SH3PXD2B (ENSUMAG00000024532) #20	UBTD2 (ENSUMAG00000024535) #22	EFCAB9 (ENSUMAG00000024536) #23	STK10 (ENSUMAG00000024537) #24	FBXW11 (ENSUMAG00000024650) #25	SMIM23 (ENSUMAG00000024651) #26	FGF18 (ENSUMAG00000024652) #27	ENSUMAG00000024653 ##28	RANBP17 (ENSUMAG00000024660) #31	GABRP (ENSUMAG00000024666) #32	KCNIP1 (ENSUMAG00000024667) #34	KCNMB1 (ENSUMAG00000024668) #33	LCP2 (ENSUMAG00000024670) #35	FOXI1 (ENSUMAG00000024672) #37	ENSUMAG00000024673	DOCK2 (ENSUMAG00000024674)	INSYN2B (ENSUMAG00000024676)
American black bear	MODERN SPECIES	2323																UBTD2 (ENSUAMG00000000133) #22	EFCAB9 (ENSUAMG00000000052) #23	STK10 (ENSUAMG00000022984) #24
Giant Panda	MODERN SPECIES	13	MSX2 (ENSAMEG00000011380)	NSG2 (ENSAMEG00000011368) #8	ENSAMEG00000025521	CPEB4 (ENSAMEG00000011342) #9	ENSAMEG00000011333 #10	STC2 (ENSAMEG00000011326) #11	BNIP1 (ENSAMEG00000011310) #13	NKX2-5 (ENSAMEG00000028084) #12	CREBRF (ENSAMEG00000011290) #14	ATP6V0E1 (ENSAMEG00000029545) #15	ENSAMEG00000011270 ##16	ERGIC1 (ENSAMEG00000011244) #17	DUSP1 (ENSAMEG00000011224) #18	NEURL1B (ENSAMEG00000011213) #19	SH3PXD2B (ENSAMEG00000027237) #20	UBTD2 (ENSAMEG00000011190) #22	ENSAMEG00000011187 #23	STK10 (ENSAMEG00000011144) #24	FBXW11 (ENSAMEG00000011107) #25	SMIM23 (ENSAMEG00000027396) #26	FGF18 (ENSAMEG00000027271) #27	ENSAMEG00000003910 ##28	TLX3 (ENSAMEG00000003951) #29	RANBP17 (ENSAMEG00000003955) #31	GABRP (ENSAMEG00000003979) #32	KCNIP1 (ENSAMEG00000003998) #34	KCNMB1 (ENSAMEG00000030560) #33	LCP2 (ENSAMEG00000004097) #35	C5orf58 (ENSAMEG00000023780)	FOXI1 (ENSAMEG00000001516) #37	DOCK2 (ENSAMEG00000008771)
Mustelinae	ANCESTRAL SPECIES	13	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Ferret	MODERN SPECIES	162	MSX2 (ENSMPUG00000012673)	NSG2 (ENSMPUG00000012677) #8	C5orf47 (ENSMPUG00000012685)	CPEB4 (ENSMPUG00000012687) #9	ENSMPUG00000012689	ENSMPUG00000012693 #10	STC2 (ENSMPUG00000012704) #11	NKX2-5 (ENSMPUG00000012707) #12	BNIP1 (ENSMPUG00000012710) #13	CREBRF (ENSMPUG00000012726) #14	RPL26L1 (ENSMPUG00000012729) #16	ERGIC1 (ENSMPUG00000012743) #17	DUSP1 (ENSMPUG00000012746) #18	NEURL1B (ENSMPUG00000012751) #19	SH3PXD2B (ENSMPUG00000012754) #20	UBTD2 (ENSMPUG00000012758) #22	EFCAB9 (ENSMPUG00000012759) #23	STK10 (ENSMPUG00000012761) #24	ENSMPUG00000012767	FBXW11 (ENSMPUG00000012769) #25	ENSMPUG00000012839	SMIM23 (ENSMPUG00000012844) #26	FGF18 (ENSMPUG00000012855) #27	ENSMPUG00000012858 ##28	TLX3 (ENSMPUG00000012862) #29	RANBP17 (ENSMPUG00000012874) #31	GABRP (ENSMPUG00000012885) #32	KCNIP1 (ENSMPUG00000012891) #34	KCNMB1 (ENSMPUG00000012894) #33	LCP2 (ENSMPUG00000012897) #35	FOXI1 (ENSMPUG00000012982) #37
American mink	MODERN SPECIES	101	MSX2 (ENSNVIG00000021793)	NSG2 (ENSNVIG00000021801) #8	C5orf47 (ENSNVIG00000021820)	CPEB4 (ENSNVIG00000021827) #9	ENSNVIG00000021892 #10	STC2 (ENSNVIG00000021901) #11	NKX2-5 (ENSNVIG00000021910) #12	SEC20 (ENSNVIG00000021912) #13	CREBRF (ENSNVIG00000021945) #14	ATP6V0E1 (ENSNVIG00000021974) #15	RPL26L1 (ENSNVIG00000022013) #16	ERGIC1 (ENSNVIG00000022026) #17	DUSP1 (ENSNVIG00000022051) #18	NEURL1B (ENSNVIG00000022058) #19	SH3PXD2B (ENSNVIG00000022076) #20	UBTD2 (ENSNVIG00000022111) #22	EFCAB9 (ENSNVIG00000022124) #23	STK10 (ENSNVIG00000022143) #24	FBXW11 (ENSNVIG00000022157) #25	FGF18 (ENSNVIG00000022241) #27	ENSNVIG00000022254 ##28	TLX3 (ENSNVIG00000022330) #29	RANBP17 (ENSNVIG00000022334) #31	GABRP (ENSNVIG00000022383) #32	KCNIP1 (ENSNVIG00000022447) #34	KCNMB1 (ENSNVIG00000022481) #33	LCP2 (ENSNVIG00000022495) #35	C5orf58 (ENSNVIG00000022567)	FOXI1 (ENSNVIG00000022570) #37	DOCK2 (ENSNVIG00000022575)	INSYN2B (ENSNVIG00000022610)
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00390000008496.i.a	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.fb #15	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Red fox	MODERN SPECIES	2	ENSVVUG00000002012	CPEB4 (ENSVVUG00000002022) #9	ENSVVUG00000002062	ENSVVUG00000002071 #10	STC2 (ENSVVUG00000002084) #11	NKX2-5 (ENSVVUG00000002086) #12	BNIP1 (ENSVVUG00000002123) #13	ENSVVUG00000002168	CREBRF (ENSVVUG00000002198) #14	ATP6V0E1 (ENSVVUG00000002213) #15	ENSVVUG00000002223 ##16	ERGIC1 (ENSVVUG00000002261) #17	DUSP1 (ENSVVUG00000002297) #18	ENSVVUG00000002314 #19	SH3PXD2B (ENSVVUG00000002354) #20	UBTD2 (ENSVVUG00000002372) #22	EFCAB9 (ENSVVUG00000002399) #23	STK10 (ENSVVUG00000002418) #24	FBXW11 (ENSVVUG00000002484) #25	SMIM23 (ENSVVUG00000002597) #26	FGF18 (ENSVVUG00000002630) #27	ENSVVUG00000002639 ##28	TLX3 (ENSVVUG00000002648) #29	RANBP17 (ENSVVUG00000002668) #31	ENSVVUG00000002726	GABRP (ENSVVUG00000002730) #32	KCNIP1 (ENSVVUG00000002751) #34	KCNMB1 (ENSVVUG00000002761) #33	LCP2 (ENSVVUG00000002768) #35	FOXI1 (ENSVVUG00000002797) #37	DOCK2 (ENSVVUG00000002823)
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00390000008496.i.a	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.fb #15	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Dingo	MODERN SPECIES	324	MSX2 (ENSCAFG00020011431)	NSG2 (ENSCAFG00020011410) #8	C5orf47 (ENSCAFG00020011376)	CPEB4 (ENSCAFG00020011285) #9	ENSCAFG00020011279	ENSCAFG00020011274 #10	STC2 (ENSCAFG00020011270) #11	NKX2-5 (ENSCAFG00020011268) #12	BNIP1 (ENSCAFG00020011264) #13	CREBRF (ENSCAFG00020011261) #14	ENSCAFG00020011259 #15	ERGIC1 (ENSCAFG00020011256) #17	DUSP1 (ENSCAFG00020011252) #18	NEURL1B (ENSCAFG00020011251) #19	SH3PXD2B (ENSCAFG00020011225) #20	UBTD2 (ENSCAFG00020011220) #22	STK10 (ENSCAFG00020009145) #24	FBXW11 (ENSCAFG00020008756) #25	FGF18 (ENSCAFG00020008729) #27	ENSCAFG00020008713 ##28	TLX3 (ENSCAFG00020008709) #29	ENSCAFG00020008705	RANBP17 (ENSCAFG00020005518) #31	GABRP (ENSCAFG00020005355) #32	KCNIP1 (ENSCAFG00020005302) #34	KCNMB1 (ENSCAFG00020005273) #33	LCP2 (ENSCAFG00020005197) #35	FOXI1 (ENSCAFG00020005155) #37	INSYN2B (ENSCAFG00020005151)	DOCK2 (ENSCAFG00020004726)	SPDL1 (ENSCAFG00020004634)
Dog	MODERN SPECIES	32	MSX2 (ENSCAFG00845000450)	CPEB4 (ENSCAFG00845000467) #8	C5orf47 (ENSCAFG00845000487)	CPEB4 (ENSCAFG00845000511) #9	ENSCAFG00845000535	ENSCAFG00845000564 #10	STC2 (ENSCAFG00845000605) #11	NKX2-5 (ENSCAFG00845000634) #12	BNIP1 (ENSCAFG00845000706) #13	CREBRF (ENSCAFG00845000727) #14	ATP6V0E1 (ENSCAFG00845000758) #15	ERGIC1 (ENSCAFG00845000852) #17	DUSP1 (ENSCAFG00845000953) #18	NEURL1B (ENSCAFG00845000993) #19	SH3PXD2B (ENSCAFG00845001080) #20	UBTD2 (ENSCAFG00845001180) #22	EFCAB9 (ENSCAFG00845001213) #23	STK10 (ENSCAFG00845001258) #24	FBXW11 (ENSCAFG00845001422) #25	SMIM23 (ENSCAFG00845001607) #26	ENSCAFG00845001623	FGF18 (ENSCAFG00845001658) #27	NPM1 (ENSCAFG00845001853) ##28	TLX3 (ENSCAFG00845001907) #29	RANBP17 (ENSCAFG00845002032) #31	GABRP (ENSCAFG00845002228) #32	KCNIP1 (ENSCAFG00845002324) #34	KCNMB1 (ENSCAFG00845002523) #33	LCP2 (ENSCAFG00845002557) #35	C5orf58 (ENSCAFG00845002585)	FOXI1 (ENSCAFG00845002600) #37
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Cat	MODERN SPECIES		MSX2 (ENSFCAG00000033871)	NSG2 (ENSFCAG00000022137) #8	ENSFCAG00000041207	CPEB4 (ENSFCAG00000031504) #9	ENSFCAG00000021908 #10	STC2 (ENSFCAG00000046627) #11	NKX2-5 (ENSFCAG00000000539) #12	BNIP1 (ENSFCAG00000000536) #13	CREBRF (ENSFCAG00000000534) #14	ATP6V0E1 (ENSFCAG00000031789) #15	RPL26L1 (ENSFCAG00000026949) #16	ERGIC1 (ENSFCAG00000011258) #17	DUSP1 (ENSFCAG00000037697) #18	NEURL1B (ENSFCAG00000031157) #19	SH3PXD2B (ENSFCAG00000038295) #20	UBTD2 (ENSFCAG00000044346) #22	EFCAB9 (ENSFCAG00000016235) #23	STK10 (ENSFCAG00000000434) #24	FBXW11 (ENSFCAG00000027834) #25	SMIM23 (ENSFCAG00000044613) #26	FGF18 (ENSFCAG00000007079) #27	NPM1 (ENSFCAG00000030268) ##28	TLX3 (ENSFCAG00000035960) #29	RANBP17 (ENSFCAG00000024510) #31	GABRP (ENSFCAG00000003782) #32	KCNIP1 (ENSFCAG00000031673) #34	KCNMB1 (ENSFCAG00000036866) #33	LCP2 (ENSFCAG00000000836) #35	ENSFCAG00000046620 #36	FOXI1 (ENSFCAG00000000835) #37	DOCK2 (ENSFCAG00000000834)
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Tiger	MODERN SPECIES	88													DUSP1 (ENSPTIG00000021330) #18	ENSPTIG00000021333 #19	SH3PXD2B (ENSPTIG00000021346) #20	UBTD2 (ENSPTIG00000021417) #22	EFCAB9 (ENSPTIG00000021425) #23	STK10 (ENSPTIG00000021431) #24	FBXW11 (ENSPTIG00000021490) #25	SMIM23 (ENSPTIG00000021545) #26	FGF18 (ENSPTIG00000021564) #27	ENSPTIG00000021568 ##28	RANBP17 (ENSPTIG00000021586) #31	GABRP (ENSPTIG00000021600) #32
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866 #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
lion	MODERN SPECIES		MSX2 (ENSPLOG00000014575)	NSG2 (ENSPLOG00000014484) #8	C5orf47 (ENSPLOG00000014426)	CPEB4 (ENSPLOG00000014177) #9	ENSPLOG00000014087 #10	STC2 (ENSPLOG00000014037) #11	NKX2-5 (ENSPLOG00000014000) #12	BNIP1 (ENSPLOG00000013932) #13	CREBRF (ENSPLOG00000013863) #14	ATP6V0E1 (ENSPLOG00000013764) #15	RPL26L1 (ENSPLOG00000013719) #16	ERGIC1 (ENSPLOG00000013645) #17	DUSP1 (ENSPLOG00000013584) #18	NEURL1B (ENSPLOG00000013404) #19	SH3PXD2B (ENSPLOG00000013192) #20	UBTD2 (ENSPLOG00000013141) #22	EFCAB9 (ENSPLOG00000013080) #23	STK10 (ENSPLOG00000013044) #24	FBXW11 (ENSPLOG00000012707) #25	FGF18 (ENSPLOG00000012527) #27	ENSPLOG00000012460 ##28	TLX3 (ENSPLOG00000012406) #29	RANBP17 (ENSPLOG00000012173) #31	GABRP (ENSPLOG00000011935) #32	KCNMB1 (ENSPLOG00000011886) #33	KCNIP1 (ENSPLOG00000011622) #34	LCP2 (ENSPLOG00000011278) #35	C5orf58 (ENSPLOG00000011213)	FOXI1 (ENSPLOG00000011159) #37	INSYN2B (ENSPLOG00000011126)	DOCK2 (ENSPLOG00000010942)
leopard	MODERN SPECIES	18	DRD1 (ENSPPRG00000019529)	MSX2 (ENSPPRG00000023106)	NSG2 (ENSPPRG00000000307) #8	CPEB4 (ENSPPRG00000001603) #9	ENSPPRG00000003207 #10	STC2 (ENSPPRG00000003601) #11	NKX2-5 (ENSPPRG00000004094) #12	BNIP1 (ENSPPRG00000005455) #13	CREBRF (ENSPPRG00000005970) #14	ATP6V0E1 (ENSPPRG00000006470) #15	RPL26L1 (ENSPPRG00000006918) #16	ERGIC1 (ENSPPRG00000008276) #17	DUSP1 (ENSPPRG00000008559) #18	NEURL1B (ENSPPRG00000009165) #19	SH3PXD2B (ENSPPRG00000009689) #20	UBTD2 (ENSPPRG00000010187) #22	EFCAB9 (ENSPPRG00000011345) #23	STK10 (ENSPPRG00000011731) #24	FBXW11 (ENSPPRG00000012730) #25	SMIM23 (ENSPPRG00000013401) #26	FGF18 (ENSPPRG00000013778) #27	ENSPPRG00000014990 ##28	TLX3 (ENSPPRG00000015978) #29	RANBP17 (ENSPPRG00000019041) #31	GABRP (ENSPPRG00000025082) #32	KCNMB1 (ENSPPRG00000025063) #33	KCNIP1 (ENSPPRG00000024956) #34	LCP2 (ENSPPRG00000024344) #35	C5orf58 (ENSPPRG00000024140)	FOXI1 (ENSPPRG00000024120) #37	INSYN2B (ENSPPRG00000024086)
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Suina	ANCESTRAL SPECIES	25	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00900000143489	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Pig	MODERN SPECIES	7	C5orf47 (ENSSSCG00000035512)	CPEB4 (ENSSSCG00000016981) #9	ENSSSCG00000016982 #10	STC2 (ENSSSCG00000016983) #11	NKX2-5 (ENSSSCG00000036285) #12	BNIP1 (ENSSSCG00000016985) #13	CREBRF (ENSSSCG00000016986) #14	ENSSSCG00000016990 #15	RPL26L1 (ENSSSCG00000016989) #16	ENSSSCG00000035845	ERGIC1 (ENSSSCG00000016988) #17	ENSSSCG00000056851	DUSP1 (ENSSSCG00000016991) #18	NEURL1B (ENSSSCG00000016992) #19	SH3PXD2B (ENSSSCG00000027378) #20	UBTD2 (ENSSSCG00000023948) #22	EFCAB9 (ENSSSCG00000016995) #23	STK10 (ENSSSCG00000022478) #24	FBXW11 (ENSSSCG00000023307) #25	ENSSSCG00000023757	FGF18 (ENSSSCG00000016997) #27	ENSSSCG00000016998 ##28	TLX3 (ENSSSCG00000016999) #29	RANBP17 (ENSSSCG00000017000) #31	GABRP (ENSSSCG00000021902) #32	KCNIP1 (ENSSSCG00000017003) #34	KCNMB1 (ENSSSCG00000017005) #33	LCP2 (ENSSSCG00000017006) #35	C5orf58 (ENSSSCG00000051265)	FOXI1 (ENSSSCG00000017009) #37	DOCK2 (ENSSSCG00000017008)
Chacoan peccary	MODERN SPECIES	97			CPEB4 (ENSCWAG00000000128) #9	ENSCWAG00000000497 #10	STC2 (ENSCWAG00000000525) #11	NKX2-5 (ENSCWAG00000000540) #12	BNIP1 (ENSCWAG00000000552) #13	CREBRF (ENSCWAG00000000582) #14	ENSCWAG00000000600 #15	RPL26L1 (ENSCWAG00000000616) #16	ENSCWAG00000000627	ERGIC1 (ENSCWAG00000000647) #17	DUSP1 (ENSCWAG00000000695) #18	NEURL1B (ENSCWAG00000000720) #19	SH3PXD2B (ENSCWAG00000000790) #20	UBTD2 (ENSCWAG00000000837) #22	EFCAB9 (ENSCWAG00000000850) #23	STK10 (ENSCWAG00000000878) #24	FBXW11 (ENSCWAG00000000944) #25	FGF18 (ENSCWAG00000001037) #27	NPM1 (ENSCWAG00000001072) ##28	TLX3 (ENSCWAG00000001128) #29	RANBP17 (ENSCWAG00000001156) #31	GABRP (ENSCWAG00000001221) #32	KCNIP1 (ENSCWAG00000001291) #34	KCNMB1 (ENSCWAG00000001422) #33	LCP2 (ENSCWAG00000001455) #35	C5orf58 (ENSCWAG00000001565)	FOXI1 (ENSCWAG00000001576) #37	DOCK2 (ENSCWAG00000001602)	INSYN2B (ENSCWAG00000001704)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Pecora	ANCESTRAL SPECIES	25	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Percora_a	ANCESTRAL SPECIES	26	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.m ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Bovidae	ANCESTRAL SPECIES	26	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.m ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Bovinae	ANCESTRAL SPECIES	25	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00420000029792.d	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT01000000218258	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.m ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
American bison	MODERN SPECIES	3215						STC2 (ENSBBBG00000011679) #11	NKX2-5 (ENSBBBG00000011682) #12	BNIP1 (ENSBBBG00000011701) #13	CREBRF (ENSBBBG00000011711) #14	ENSBBBG00000011722 #15	RPL26L1 (ENSBBBG00000011726) #16	ERGIC1 (ENSBBBG00000002176) #17	DUSP1 (ENSBBBG00000011749) #18	NEURL1B (ENSBBBG00000011766) #19	SH3PXD2B (ENSBBBG00000011784) #20	UBTD2 (ENSBBBG00000011796) #22	EFCAB9 (ENSBBBG00000002192) #23	STK10 (ENSBBBG00000011816) #24	FBXW11 (ENSBBBG00000011859) #25	ENSBBBG00000007881	ENSBBBG00000011871	FGF18 (ENSBBBG00000011877) #27	ENSBBBG00000011930 ##28	TLX3 (ENSBBBG00000011939) #29
Bos	ANCESTRAL SPECIES	26	ENSGT00390000000483.a.a #8	ENSGT00940000168505	ENSGT00940000154998.a.a #9	ENSGT00420000029792.d	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT01000000218258	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.m ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Bos_b	ANCESTRAL SPECIES	29	ENSGT00390000000483.a.a #8	ENSGT00940000168505	ENSGT00940000154998.a.a #9	ENSGT00420000029792.d	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.d ##16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT01000000218258	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.m ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Cow	MODERN SPECIES	12	ENSBTAG00000048786	NSG2 (ENSBTAG00000000564) #8	C20H5orf47 (ENSBTAG00000054459)	CPEB4 (ENSBTAG00000009995) #9	BOD1 (ENSBTAG00000034598) #10	STC2 (ENSBTAG00000001823) #11	NKX2-5 (ENSBTAG00000020568) #12	BNIP1 (ENSBTAG00000002021) #13	CREBRF (ENSBTAG00000002020) #14	ATP6V0E1 (ENSBTAG00000015100) #15	RPL26L1 (ENSBTAG00000015099) ##16	ERGIC1 (ENSBTAG00000015955) #17	DUSP1 (ENSBTAG00000013863) #18	NEURL1B (ENSBTAG00000001429) #19	SH3PXD2B (ENSBTAG00000009019) #20	UBTD2 (ENSBTAG00000034659) #22	EFCAB9 (ENSBTAG00000008876) #23	STK10 (ENSBTAG00000017457) #24	FBXW11 (ENSBTAG00000015376) #25	ENSBTAG00000053610	ENSBTAG00000054615	FGF18 (ENSBTAG00000000128) #27	NPM1 (ENSBTAG00000015316) ##28	TLX3 (ENSBTAG00000010003) #29	RANBP17 (ENSBTAG00000024801) #31	GABRP (ENSBTAG00000002779) #32	KCNIP1 (ENSBTAG00000002865) #34	KCNMB1 (ENSBTAG00000002985) #33	LCP2 (ENSBTAG00000009381) #35	FOXI1 (ENSBTAG00000014620) #37	INSYN2B (ENSBTAG00000002134)
Hybrid Bos Indicus	MODERN SPECIES	12	NSG2 (ENSBIXG00005018735) #8	ENSBIXG00005018775	CPEB4 (ENSBIXG00005018897) #9	ENSBIXG00005018925 #10	STC2 (ENSBIXG00005018970) #11	NKX2-5 (ENSBIXG00005018998) #12	BNIP1 (ENSBIXG00005019018) #13	CREBRF (ENSBIXG00005002650) #14	ENSBIXG00005019047	ENSBIXG00005005519 #15	ENSBIXG00005019189 #17	DUSP1 (ENSBIXG00005007821) #18	NEURL1B (ENSBIXG00005019283) #19	SH3PXD2B (ENSBIXG00005019342) #20	ENSBIXG00005003145	UBTD2 (ENSBIXG00005007823) #22	EFCAB9 (ENSBIXG00005019383) #23	STK10 (ENSBIXG00005019395) #24	FBXW11 (ENSBIXG00005006031) #25	ENSBIXG00005019479	ENSBIXG00005003177	FGF18 (ENSBIXG00005019550) #27	ENSBIXG00005019594 ##28	TLX3 (ENSBIXG00005019612) #29	RANBP17 (ENSBIXG00005019712) #31	GABRP (ENSBIXG00005019798) #32	KCNMB1 (ENSBIXG00005019845) #33	KCNIP1 (ENSBIXG00005020080) #34	LCP2 (ENSBIXG00005003334) #35	C5orf58 (ENSBIXG00005003342)	FOXI1 (ENSBIXG00005005867) #37
Bos_a	ANCESTRAL SPECIES	74	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00420000029792.d	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT01000000218258	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.m ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00940000154903.b
Wild yak	MODERN SPECIES	2361															SH3PXD2B (ENSBMUG00000017549) #20	UBTD2 (ENSBMUG00000017568) #22	EFCAB9 (ENSBMUG00000017597) #23	STK10 (ENSBMUG00000017627) #24	FBXW11 (ENSBMUG00000017679) #25	ENSBMUG00000017728
Caprinae	ANCESTRAL SPECIES	24	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000157760.e	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00390000016262.f	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.m ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Goat	MODERN SPECIES	12	C5orf47 (ENSCHIG00000015963)	CPEB4 (ENSCHIG00000011030) #9	ENSCHIG00000014604	ENSCHIG00000021511 #10	STC2 (ENSCHIG00000005361) #11	NKX2-5 (ENSCHIG00000017420) #12	BNIP1 (ENSCHIG00000007910) #13	CREBRF (ENSCHIG00000011720) #14	ENSCHIG00000023731 #15	RPL26L1 (ENSCHIG00000015371) #16	ERGIC1 (ENSCHIG00000000491) #17	DUSP1 (ENSCHIG00000021879) #18	NEURL1B (ENSCHIG00000011973) #19	SH3PXD2B (ENSCHIG00000017285) #20	ENSCHIG00000019482	UBTD2 (ENSCHIG00000008177) #22	STK10 (ENSCHIG00000022275) #24	FBXW11 (ENSCHIG00000015807) #25	ENSCHIG00000020677	FGF18 (ENSCHIG00000011455) #27	ENSCHIG00000013986 ##28	TLX3 (ENSCHIG00000009023) #29	ENSCHIG00000007336 #31	GABRP (ENSCHIG00000013304) #32	KCNIP1 (ENSCHIG00000022505) #34	ENSCHIG00000019721	KCNMB1 (ENSCHIG00000016254) #33	LCP2 (ENSCHIG00000020683) #35	FOXI1 (ENSCHIG00000015541) #37	INSYN2B (ENSCHIG00000008171)	ENSCHIG00000022506
Rambouillet Sheep	MODERN SPECIES	7	NSG2 (ENSOARG00020020679) #8	C5orf47 (ENSOARG00020020601)	CPEB4 (ENSOARG00020019809) #9	ENSOARG00020019684 #10	STC2 (ENSOARG00020019635) #11	NKX2-5 (ENSOARG00020019608) #12	BNIP1 (ENSOARG00020019520) #13	CREBRF (ENSOARG00020019431) #14	ATP6V0E1 (ENSOARG00020019362) #15	RPL26L1 (ENSOARG00020019301) #16	ERGIC1 (ENSOARG00020019165) #17	DUSP1 (ENSOARG00020019107) #18	NEURL1B (ENSOARG00020018934) #19	SH3PXD2B (ENSOARG00020018558) #20	ENSOARG00020018509	UBTD2 (ENSOARG00020018478) #22	EFCAB9 (ENSOARG00020018435) #23	STK10 (ENSOARG00020017936) #24	ENSOARG00020017649 #25	FGF18 (ENSOARG00020017567) #27	ENSOARG00020017428 ##28	TLX3 (ENSOARG00020017378) #29	RANBP17 (ENSOARG00020016041) #31	GABRP (ENSOARG00020015850) #32	KCNMB1 (ENSOARG00020015798) #33	KCNIP1 (ENSOARG00020015228) #34	LCP2 (ENSOARG00020014665) #35	C5orf58 (ENSOARG00020014592)	FOXI1 (ENSOARG00020014555) #37	INSYN2B (ENSOARG00020014497)	DOCK2 (ENSOARG00020014360)
Siberian musk deer	MODERN SPECIES	182	ENSMMSG00000015984	NSG2 (ENSMMSG00000016007) #8	CPEB4 (ENSMMSG00000016141) #9	ENSMMSG00000016319	ENSMMSG00000016344 #10	STC2 (ENSMMSG00000016387) #11	NKX2-5 (ENSMMSG00000016422) #12	BNIP1 (ENSMMSG00000016447) #13	CREBRF (ENSMMSG00000016494) #14	ENSMMSG00000016537 #15	RPL26L1 (ENSMMSG00000016583) #16	ERGIC1 (ENSMMSG00000016601) #17	DUSP1 (ENSMMSG00000016631) #18	NEURL1B (ENSMMSG00000016666) #19	SH3PXD2B (ENSMMSG00000016746) #20	UBTD2 (ENSMMSG00000016799) #22	EFCAB9 (ENSMMSG00000016840) #23	STK10 (ENSMMSG00000016886) #24	FBXW11 (ENSMMSG00000016966) #25	FGF18 (ENSMMSG00000017102) #27	ENSMMSG00000017147 ##28	TLX3 (ENSMMSG00000017339) #29	RANBP17 (ENSMMSG00000017367) #31	GABRP (ENSMMSG00000017535) #32	KCNIP1 (ENSMMSG00000017604) #34	KCNMB1 (ENSMMSG00000018061) #33	LCP2 (ENSMMSG00000018116) #35	C5orf58 (ENSMMSG00000018219)	FOXI1 (ENSMMSG00000018248) #37	DOCK2 (ENSMMSG00000018299)	INSYN2B (ENSMMSG00000018530)
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.k.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Blue whale	MODERN SPECIES	14	STC2 (ENSBMSG00010011331) #11	ENSBMSG00010011323	NKX2-5 (ENSBMSG00010011319) #12	ENSBMSG00010011310	ENSBMSG00010011299	BNIP1 (ENSBMSG00010011290) #13	ENSBMSG00010011277	CREBRF (ENSBMSG00010011255) #14	ENSBMSG00010011236 #15	RPL26L1 (ENSBMSG00010011223) #16	ERGIC1 (ENSBMSG00010011201) #17	DUSP1 (ENSBMSG00010011183) #18	NEURL1B (ENSBMSG00010011096) #19	SH3PXD2B (ENSBMSG00010011059) #20	ENSBMSG00010011045	UBTD2 (ENSBMSG00010011030) #22	EFCAB9 (ENSBMSG00010011022) #23	ENSBMSG00010011019	STK10 (ENSBMSG00010011007) #24	ENSBMSG00010010999	FBXW11 (ENSBMSG00010010896) #25	SMIM23 (ENSBMSG00010010861) #26	FGF18 (ENSBMSG00010010843) #27	ENSBMSG00010010827 ##28	TLX3 (ENSBMSG00010010805) #29	RANBP17 (ENSBMSG00010010778) #31	GABRP (ENSBMSG00010010718) #32	ENSBMSG00010010657 #34	KCNMB1 (ENSBMSG00010010631) #33	RNF145 (ENSBMSG00010010449)	ENSBMSG00010010400
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.k.a.a.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Sperm whale	MODERN SPECIES	11	MSX2 (ENSPCTG00005002856)	NSG2 (ENSPCTG00005002847) #8	C5orf47 (ENSPCTG00005002836)	CPEB4 (ENSPCTG00005002819) #9	BOD1 (ENSPCTG00005002798) #10	STC2 (ENSPCTG00005002775) #11	NKX2-5 (ENSPCTG00005002758) #12	BNIP1 (ENSPCTG00005002731) #13	CREBRF (ENSPCTG00005002713) #14	ATP6V0E1 (ENSPCTG00005002688) #15	RPL26L1 (ENSPCTG00005002672) #16	ERGIC1 (ENSPCTG00005002638) #17	DUSP1 (ENSPCTG00005002618) #18	NEURL1B (ENSPCTG00005002578) #19	SH3PXD2B (ENSPCTG00005002536) #20	UBTD2 (ENSPCTG00005002517) #22	EFCAB9 (ENSPCTG00005002503) #23	STK10 (ENSPCTG00005002452) #24	FBXW11 (ENSPCTG00005002420) #25	SMIM23 (ENSPCTG00005002400) #26	FGF18 (ENSPCTG00005002388) #27	NPM1 (ENSPCTG00005002370) ##28	TLX3 (ENSPCTG00005002353) #29	RANBP17 (ENSPCTG00005002281) #31	GABRP (ENSPCTG00005002206) #32	KCNMB1 (ENSPCTG00005002175) #33	KCNIP1 (ENSPCTG00005002065) #34	LCP2 (ENSPCTG00005001929) #35	C2H5orf58 (ENSPCTG00005001891)	FOXI1 (ENSPCTG00005001878) #37	INSYN2B (ENSPCTG00005001869)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.k.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Dolphin	MODERN SPECIES	1756															SH3PXD2B (ENSTTRG00000012935) #20	UBTD2 (ENSTTRG00000012934) #22	EFCAB9 (ENSTTRG00000012933) #23	STK10 (ENSTTRG00000012927) #24
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.k.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Vaquita	MODERN SPECIES	14	NSG2 (ENSPSNG00000006661) #8	ENSPSNG00000006717	C5orf47 (ENSPSNG00000006745)	CPEB4 (ENSPSNG00000006810) #9	ENSPSNG00000006924 #10	STC2 (ENSPSNG00000006970) #11	NKX2-5 (ENSPSNG00000007002) #12	BNIP1 (ENSPSNG00000007042) #13	CREBRF (ENSPSNG00000007099) #14	ENSPSNG00000007148 #15	RPL26L1 (ENSPSNG00000007180) #16	ERGIC1 (ENSPSNG00000007216) #17	DUSP1 (ENSPSNG00000007271) #18	NEURL1B (ENSPSNG00000007317) #19	SH3PXD2B (ENSPSNG00000007402) #20	UBTD2 (ENSPSNG00000007475) #22	EFCAB9 (ENSPSNG00000007521) #23	STK10 (ENSPSNG00000007570) #24	ENSPSNG00000007596	FBXW11 (ENSPSNG00000007701) #25	SMIM23 (ENSPSNG00000007767) #26	FGF18 (ENSPSNG00000007820) #27	ENSPSNG00000007851 ##28	TLX3 (ENSPSNG00000007915) #29	RANBP17 (ENSPSNG00000007956) #31	GABRP (ENSPSNG00000008024) #32	KCNIP1 (ENSPSNG00000008231) #34	KCNMB1 (ENSPSNG00000008456) #33	LCP2 (ENSPSNG00000008524) #35	C5orf58 (ENSPSNG00000008844)	FOXI1 (ENSPSNG00000008872) #37
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00640000091672	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.db.b.a.a.a #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b.k.a.a.a ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A
Narwhal	MODERN SPECIES	298	C5orf47 (ENSMMNG00015008001)	CPEB4 (ENSMMNG00015007861) #9	ENSMMNG00015007782 #10	STC2 (ENSMMNG00015007763) #11	ENSMMNG00015007753	NKX2-5 (ENSMMNG00015007742) #12	BNIP1 (ENSMMNG00015007725) #13	CREBRF (ENSMMNG00015007693) #14	ENSMMNG00015007663 #15	RPL26L1 (ENSMMNG00015007637) #16	ENSMMNG00015007623	ERGIC1 (ENSMMNG00015007594) #17	DUSP1 (ENSMMNG00015007561) #18	NEURL1B (ENSMMNG00015007510) #19	SH3PXD2B (ENSMMNG00015007447) #20	UBTD2 (ENSMMNG00015007429) #22	EFCAB9 (ENSMMNG00015007406) #23	STK10 (ENSMMNG00015007367) #24	ENSMMNG00015007348	FBXW11 (ENSMMNG00015007223) #25	SMIM23 (ENSMMNG00015007147) #26	FGF18 (ENSMMNG00015007127) #27	ENSMMNG00015007049 ##28	TLX3 (ENSMMNG00015007005) #29	RANBP17 (ENSMMNG00015006966) #31	GABRP (ENSMMNG00015006917) #32	KCNMB1 (ENSMMNG00015006894) #33	KCNIP1 (ENSMMNG00015006810) #34	LCP2 (ENSMMNG00015006650) #35	C5orf58 (ENSMMNG00015006620)	FOXI1 (ENSMMNG00015006610) #37
Beluga whale	MODERN SPECIES	33	NSG2 (ENSDLEG00000011113) #8	C5orf47 (ENSDLEG00000011128)	CPEB4 (ENSDLEG00000011156) #9	ENSDLEG00000011214 #10	STC2 (ENSDLEG00000011225) #11	NKX2-5 (ENSDLEG00000011239) #12	BNIP1 (ENSDLEG00000011252) #13	CREBRF (ENSDLEG00000011269) #14	ATP6V0E1 (ENSDLEG00000011297) #15	RPL26L1 (ENSDLEG00000011305) #16	ERGIC1 (ENSDLEG00000011315) #17	ENSDLEG00000011343	DUSP1 (ENSDLEG00000011353) #18	NEURL1B (ENSDLEG00000011362) #19	SH3PXD2B (ENSDLEG00000011382) #20	UBTD2 (ENSDLEG00000011425) #22	EFCAB9 (ENSDLEG00000011435) #23	STK10 (ENSDLEG00000011442) #24	FBXW11 (ENSDLEG00000011487) #25	FGF18 (ENSDLEG00000011572) #27	ENSDLEG00000011597 ##28	TLX3 (ENSDLEG00000011715) #29	RANBP17 (ENSDLEG00000011734) #31	GABRP (ENSDLEG00000011916) #32	KCNIP1 (ENSDLEG00000011937) #34	KCNMB1 (ENSDLEG00000011951) #33	LCP2 (ENSDLEG00000011962) #35	FOXI1 (ENSDLEG00000012032) #37	DOCK2 (ENSDLEG00000012052)	FAM196B (ENSDLEG00000012141)	SPDL1 (ENSDLEG00000012152)
Camelidae	ANCESTRAL SPECIES	57	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00940000156866.eb #15	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00940000159553 #27	ENSGT00940000153052.c.b.a.b ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00560000078585	ENSGT00940000161316 #37	ENSGT00530000063787.A	ENSGT00940000154903
Alpaca	MODERN SPECIES	6025																ENSVPAG00000002308 #22
Arabian camel	MODERN SPECIES	14	NSG2 (ENSCDRG00005004158) #8	CPEB4 (ENSCDRG00005004317) #9	ENSCDRG00005004889 #10	STC2 (ENSCDRG00005004904) #11	NKX2-5 (ENSCDRG00005004925) #12	BNIP1 (ENSCDRG00005004968) #13	CREBRF (ENSCDRG00005005000) #14	ENSCDRG00005005036	ENSCDRG00005005054 #15	RPL26L1 (ENSCDRG00005005086) #16	ERGIC1 (ENSCDRG00005005118) #17	ENSCDRG00005005259 #18	DUSP1 (ENSCDRG00005005269) #18	NEURL1B (ENSCDRG00005005289) #19	SH3PXD2B (ENSCDRG00005005308) #20	UBTD2 (ENSCDRG00005005351) #22	EFCAB9 (ENSCDRG00005005368) #23	STK10 (ENSCDRG00005005406) #24	FBXW11 (ENSCDRG00005005462) #25	FGF18 (ENSCDRG00005005676) #27	ENSCDRG00005005702 ##28	TLX3 (ENSCDRG00005005878) #29	RANBP17 (ENSCDRG00005005894) #31	GABRP (ENSCDRG00005005990) #32	KCNIP1 (ENSCDRG00005006051) #34	KCNMB1 (ENSCDRG00005006283) #33	LCP2 (ENSCDRG00005006345) #35	C5orf58 (ENSCDRG00005006496)	FOXI1 (ENSCDRG00005006523) #37	DOCK2 (ENSCDRG00005006556)	INSYN2B (ENSCDRG00005006819)
Atlantogenata	ANCESTRAL SPECIES		ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.d ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000161316 #37	ENSGT00940000154903	ENSGT00530000063787.A
Xenarthra	ANCESTRAL SPECIES	369									ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26
Sloth	DUPLICATION
Sloth	MODERN SPECIES	10925																ENSCHOG00000010234 #22
Sloth	MODERN SPECIES	9909																ENSCHOG00000013277 #22
Armadillo	MODERN SPECIES	2167							ENSDNOG00000047902 #13	CREBRF (ENSDNOG00000038335) #14	ENSDNOG00000002470 #16	ERGIC1 (ENSDNOG00000025894) #17	DUSP1 (ENSDNOG00000049169) #18	NEURL1B (ENSDNOG00000030867) #19	ENSDNOG00000032370	ENSDNOG00000049433	SH3PXD2B (ENSDNOG00000046535) #20	UBTD2 (ENSDNOG00000003811) #22	EFCAB9 (ENSDNOG00000023791) #23	STK10 (ENSDNOG00000032482) #24	FBXW11 (ENSDNOG00000008383) #25	ENSDNOG00000016030 #26
Afrotheria	ANCESTRAL SPECIES	7	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.d ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000161316 #37	ENSGT00510000047951	ENSGT00940000159322
Afrotheria_a	ANCESTRAL SPECIES	7	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159824	ENSGT00390000000483.a.a #8	ENSGT00940000154998.a.a #9	ENSGT00940000154979 #10	ENSGT00390000005989.a #11	ENSGT00940000158996 #12	ENSGT00390000014412 #13	ENSGT00390000007125.b #14	ENSGT00390000014165.c.b #16	ENSGT00530000063113.C #17	ENSGT00940000159044 #18	ENSGT00940000157079.a #19	ENSGT00940000158396 #20	ENSGT00940000156641 #22	ENSGT00390000007501 #23	ENSGT00940000156818 #24	ENSGT00940000155898 #25	ENSGT00390000017300 #26	ENSGT00940000159553 #27	ENSGT00940000153052.d ##28	ENSGT00940000160629 #29	ENSGT00940000153139.B.b #31	ENSGT00940000160813 #32	ENSGT00940000158048 #34	ENSGT00950000183039.B.b.b #33	ENSGT00940000156835 #35	ENSGT00940000161316 #37	ENSGT00940000154903	ENSGT00530000063787.A
Elephant	MODERN SPECIES	2	DRD1 (ENSLAFG00000010433)	MSX2 (ENSLAFG00000001916)	NSG2 (ENSLAFG00000028103) #8	CPEB4 (ENSLAFG00000016030) #9	ENSLAFG00000003066 #10	STC2 (ENSLAFG00000006193) #11	NKX2-5 (ENSLAFG00000029311) #12	ENSLAFG00000027511 #13	CREBRF (ENSLAFG00000013690) #14	RPL26L1 (ENSLAFG00000006797) #16	ERGIC1 (ENSLAFG00000006791) #17	DUSP1 (ENSLAFG00000007743) #18	NEURL1B (ENSLAFG00000020677) #19	ENSLAFG00000029644	SH3PXD2B (ENSLAFG00000016210) #20	UBTD2 (ENSLAFG00000011441) #22	EFCAB9 (ENSLAFG00000020630) #23	ENSLAFG00000023319 #24	FBXW11 (ENSLAFG00000006465) #25	SMIM23 (ENSLAFG00000007608) #26	FGF18 (ENSLAFG00000021964) #27	ENSLAFG00000007677 ##28	TLX3 (ENSLAFG00000022612) #29	RANBP17 (ENSLAFG00000006675) #31	GABRP (ENSLAFG00000016812) #32	KCNIP1 (ENSLAFG00000016800) #34	KCNMB1 (ENSLAFG00000000860) #33	LCP2 (ENSLAFG00000012264) #35	FOXI1 (ENSLAFG00000026591) #37	INSYN2B (ENSLAFG00000004326)	DOCK2 (ENSLAFG00000006687)
Hyrax	MODERN SPECIES	7287																UBTD2 (ENSPCAG00000012855) #22	EFCAB9 (ENSPCAG00000012820) #23
Tenrec	MODERN SPECIES	6142																UBTD2 (ENSETEG00000019454) #22