Vertebrata ANCESTRAL SPECIES 542 ENSGT00940000158144 #22 ENSGT00940000156102 #24 Gnathostomata ANCESTRAL SPECIES 448 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 Euteleostomi ANCESTRAL SPECIES 1 ENSGT00610000086112 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000165661 ENSGT00390000012355.A.a ENSGT00530000063681.b.a ENSGT00940000154290.b Sarcopterygii ANCESTRAL SPECIES 1 ENSGT00940000165033 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00950000183173.E ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000165661 ENSGT00390000012355.A.a ENSGT00530000063681.b.a Tetrapoda ANCESTRAL SPECIES 2 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT01080000257332.A ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000165661 ENSGT00390000012355.A.a Amniota ANCESTRAL SPECIES 4 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT01080000257332.A ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00960000186730 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Mammalia ANCESTRAL SPECIES 10 ENSGT00940000165033 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00960000186730 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Theria ANCESTRAL SPECIES 11 ENSGT00940000165033 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00960000186730 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Eutheria ANCESTRAL SPECIES 6 ENSGT00610000086112 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.a.b ##30 ENSGT00960000186730 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00960000186730 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.a.b ##30 ENSGT01100000263873 ENSGT00960000186730 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 Glires ANCESTRAL SPECIES 7 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.a.b ##30 ENSGT01100000263873 ENSGT00960000186730 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 Rodentia ANCESTRAL SPECIES 7 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.a.b ##30 ENSGT00960000186730 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 Rodentia_B ANCESTRAL SPECIES 4 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00960000186730 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Myomorpha ANCESTRAL SPECIES 5 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00960000186730 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Muroidea ANCESTRAL SPECIES 4 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00960000186730 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Muroidea_A ANCESTRAL SPECIES 11 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00960000186730.a ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Cricetidae ANCESTRAL SPECIES 11 ENSGT00610000086112 ENSGT00940000164293 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102.c.a #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Cricetidae_B ANCESTRAL SPECIES 40 ENSGT00610000086112 ENSGT00940000164293 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01070000254013 #13 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102.c.a #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Prairie vole MODERN SPECIES 6 ENSMOCG00000020099 #7 ENSMOCG00000015077 #8 Arrdc3 (ENSMOCG00000006099) #9 ENSMOCG00000018170 #10 ENSMOCG00000013307 #11 Lysmd3 (ENSMOCG00000020333) #12 Polr3g (ENSMOCG00000014935) #13 Mblac2 (ENSMOCG00000011064) #14 Cetn3 (ENSMOCG00000009624) #15 Mef2c (ENSMOCG00000010324) #16 Tmem161b (ENSMOCG00000017125) #17 Ccnh (ENSMOCG00000005334) #18 Rasa1 (ENSMOCG00000020205) #19 Cox7c (ENSMOCG00000017709) #20 ENSMOCG00000016800 #21 Edil3 (ENSMOCG00000001973) #22 Hapln1 (ENSMOCG00000018799) #23 ENSMOCG00000000187 #24 Xrcc4 (ENSMOCG00000015137) #25 Tmem167 (ENSMOCG00000013381) #26 ENSMOCG00000010468 #27 ENSMOCG00000002610 #28 Atp6ap1l (ENSMOCG00000020532) #29 ENSMOCG00000017478 #30 Atg10 (ENSMOCG00000014675) #31 ENSMOCG00000011514 #32 Ssbp2 (ENSMOCG00000022756) #33 Acot12 (ENSMOCG00000015615) #34 Zcchc9 (ENSMOCG00000012433) #35 Ckmt2 (ENSMOCG00000003563) #36 Rasgrf2 (ENSMOCG00000015751) #37 Northern American deer mouse MODERN SPECIES 6 ENSPEMG00000008658 Ipo11 (ENSPEMG00000018393) Htr1a (ENSPEMG00000001034) ENSPEMG00000029158 Rnf180 (ENSPEMG00000021397) Nt5el (ENSPEMG00000021072) Rgs7bp (ENSPEMG00000021148) Shisal2b (ENSPEMG00000026910) Srek1ip1 (ENSPEMG00000029903) Cwc27 (ENSPEMG00000018111) Adamts6 (ENSPEMG00000021478) ENSPEMG00000022985 ENSPEMG00000016971 ENSPEMG00000028584 ENSPEMG00000027380 Edil3 (ENSPEMG00000008576) #22 ENSPEMG00000015813 Hapln1 (ENSPEMG00000020377) #23 Vcan (ENSPEMG00000021608) ##24 Xrcc4 (ENSPEMG00000020663) #25 ENSPEMG00000025116 ENSPEMG00000024390 Tmem167 (ENSPEMG00000025163) #26 ENSPEMG00000029490 ENSPEMG00000031253 Atp6ap1l (ENSPEMG00000020422) #29 ENSPEMG00000030615 Rps23 (ENSPEMG00000020618) #30 Atg10 (ENSPEMG00000015489) #31 Ssbp2 (ENSPEMG00000020873) #33 Acot12 (ENSPEMG00000024088) #34 Cricetinae ANCESTRAL SPECIES 7 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.bc #10 ENSGT00940000154880.cc #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102.c.a #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Chinese hamster chok1gshd MODERN SPECIES 1 ENSCGRG00001017247 #10 Lysmd3 (ENSCGRG00001004064) #12 ENSCGRG00001004958 Mblac2 (ENSCGRG00001018393) #14 Cetn3 (ENSCGRG00001000920) #15 ENSCGRG00001003095 ENSCGRG00001007435 Mef2c (ENSCGRG00001006934) #16 Tmem161b (ENSCGRG00001023931) #17 Ccnh (ENSCGRG00001024363) #18 Rasa1 (ENSCGRG00001024641) #19 ENSCGRG00001007486 Cox7c (ENSCGRG00001016442) #20 ENSCGRG00001000944 ENSCGRG00001002366 Edil3 (ENSCGRG00001004897) #22 Hapln1 (ENSCGRG00001024344) #23 ENSCGRG00001014126 #24 Xrcc4 (ENSCGRG00001022340) #25 Tmem167 (ENSCGRG00001013866) #26 Atp6ap1l (ENSCGRG00001003786) #29 Rps23 (ENSCGRG00001005361) #30 Atg10 (ENSCGRG00001012356) #31 Ssbp2 (ENSCGRG00001010940) #33 Acot12 (ENSCGRG00001010985) #34 Zcchc9 (ENSCGRG00001018367) #35 Ckmt2 (ENSCGRG00001019134) #36 Rasgrf2 (ENSCGRG00001001184) #37 Msh3 (ENSCGRG00001012207) DHFR (ENSCGRG00001012555) Ankrd34b (ENSCGRG00001007953) Golden Hamster MODERN SPECIES 620 Nr2f1 (ENSMAUG00000008658) Arrdc3 (ENSMAUG00000010410) #9 ENSMAUG00000010057 ENSMAUG00000008116 #10 ENSMAUG00000021704 #10 Lysmd3 (ENSMAUG00000001625) #12 ENSMAUG00000008528 Mblac2 (ENSMAUG00000019084) #14 Cetn3 (ENSMAUG00000021390) #15 Mef2c (ENSMAUG00000015018) #16 ENSMAUG00000015735 Tmem161b (ENSMAUG00000014575) #17 Ccnh (ENSMAUG00000017406) #18 Rasa1 (ENSMAUG00000011139) #19 Cox7c (ENSMAUG00000005056) #20 Edil3 (ENSMAUG00000009286) #22 ENSMAUG00000022083 ##8 Hapln1 (ENSMAUG00000008810) #23 ENSMAUG00000011125 #24 Xrcc4 (ENSMAUG00000006508) #25 Tmem167 (ENSMAUG00000000975) #26 ENSMAUG00000001668 Atp6ap1l (ENSMAUG00000001232) #29 ENSMAUG00000011243 #30 Atg10 (ENSMAUG00000011026) #31 Ssbp2 (ENSMAUG00000010660) #33 Acot12 (ENSMAUG00000019809) #34 Zcchc9 (ENSMAUG00000022026) #35 Ckmt2 (ENSMAUG00000008773) #36 Rasgrf2 (ENSMAUG00000016036) #37 Msh3 (ENSMAUG00000021619) Murinae ANCESTRAL SPECIES 24 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01070000254013 #13 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Mus ANCESTRAL SPECIES 22 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01070000254013 #13 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Mus_A ANCESTRAL SPECIES 14 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01070000254013 #13 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000165493 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Mus_B ANCESTRAL SPECIES 13 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01070000254013 #13 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634.c #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000165493 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Mouse MODERN SPECIES 4 2210408I21Rik (ENSMUSG00000071252) Fam172a (ENSMUSG00000064138) Pou5f2 (ENSMUSG00000093668) Nr2f1 (ENSMUSG00000069171) Arrdc3 (ENSMUSG00000074794) #9 Adgrv1 (ENSMUSG00000069170) #10 Lysmd3 (ENSMUSG00000035840) #12 Polr3g (ENSMUSG00000035834) #13 Mblac2 (ENSMUSG00000051098) #14 Cetn3 (ENSMUSG00000021537) #15 Mef2c (ENSMUSG00000005583) #16 Tmem161b (ENSMUSG00000035762) #17 Ccnh (ENSMUSG00000021548) #18 Rasa1 (ENSMUSG00000021549) #19 Cox7c (ENSMUSG00000017778) #20 Edil3 (ENSMUSG00000034488) #22 Hapln1 (ENSMUSG00000021613) #23 Vcan (ENSMUSG00000021614) #24 Xrcc4 (ENSMUSG00000021615) #25 Tmem167 (ENSMUSG00000012422) #26 Atp6ap1l (ENSMUSG00000078958) #29 Rps23 (ENSMUSG00000049517) #30 Atg10 (ENSMUSG00000021619) #31 Ssbp2 (ENSMUSG00000003992) #33 Acot12 (ENSMUSG00000021620) #34 Zcchc9 (ENSMUSG00000021621) #35 Ckmt2 (ENSMUSG00000021622) #36 Rasgrf2 (ENSMUSG00000021708) #37 Msh3 (ENSMUSG00000014850) Gm20379 (ENSMUSG00000100622) ##8 Dhfr (ENSMUSG00000021707) Mus_C ANCESTRAL SPECIES 10 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01070000254013 #13 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634.c #18 ENSGT00940000155846 #19 ENSGT01030000235102 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000165493 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Steppe mouse MODERN SPECIES 3223 Edil3 (ENSMSIG00000030959) #22 Hapln1 (ENSMSIG00000030957) #23 Vcan (ENSMSIG00000030941) #24 Xrcc4 (ENSMSIG00000030931) #25 Tmem167 (ENSMSIG00000030926) #26 Atp6ap1l (ENSMSIG00000030916) #29 Rps23 (ENSMSIG00000030911) #30 ENSMSIG00000030909 Atg10 (ENSMSIG00000030903) #31 ENSMSIG00000030895 #33 ENSMSIG00000030893 Acot12 (ENSMSIG00000030887) #34 Zcchc9 (ENSMSIG00000030885) #35 Ckmt2 (ENSMSIG00000030879) #36 Rasgrf2 (ENSMSIG00000029126) #37 spretus MODERN SPECIES 4 2210408I21Rik (MGP_SPRETEiJ_G0019621) Fam172a (MGP_SPRETEiJ_G0019622) Pou5f2 (MGP_SPRETEiJ_G0019623) Nr2f1 (MGP_SPRETEiJ_G0019624) Arrdc3 (MGP_SPRETEiJ_G0019625) #9 Adgrv1 (MGP_SPRETEiJ_G0019626) #10 Lysmd3 (MGP_SPRETEiJ_G0019627) #12 Polr3g (MGP_SPRETEiJ_G0019628) #13 Mblac2 (MGP_SPRETEiJ_G0019629) #14 Cetn3 (MGP_SPRETEiJ_G0019630) #15 Mef2c (MGP_SPRETEiJ_G0019631) #16 Tmem161b (MGP_SPRETEiJ_G0019632) #17 Ccnh (MGP_SPRETEiJ_G0019633) #18 Rasa1 (MGP_SPRETEiJ_G0019634) #19 MGP_SPRETEiJ_G0019635 Edil3 (MGP_SPRETEiJ_G0019636) #22 Hapln1 (MGP_SPRETEiJ_G0019637) #23 Vcan (MGP_SPRETEiJ_G0019638) #24 Xrcc4 (MGP_SPRETEiJ_G0019639) #25 Tmem167 (MGP_SPRETEiJ_G0019640) #26 MGP_SPRETEiJ_G0019641 Atp6ap1l (MGP_SPRETEiJ_G0019642) #29 Rps23 (MGP_SPRETEiJ_G0019643) #30 Atg10 (MGP_SPRETEiJ_G0019644) #31 MGP_SPRETEiJ_G0019645 Ssbp2 (MGP_SPRETEiJ_G0019646) #33 Acot12 (MGP_SPRETEiJ_G0019647) #34 Zcchc9 (MGP_SPRETEiJ_G0019648) #35 Ckmt2 (MGP_SPRETEiJ_G0019649) #36 Rasgrf2 (MGP_SPRETEiJ_G0019650) #37 Msh3 (MGP_SPRETEiJ_G0019651) Ryukyu mouse MODERN SPECIES 4 2210408I21Rik (MGP_CAROLIEiJ_G0018738) Fam172a (MGP_CAROLIEiJ_G0018739) Pou5f2 (MGP_CAROLIEiJ_G0018740) Nr2f1 (MGP_CAROLIEiJ_G0018741) Arrdc3 (MGP_CAROLIEiJ_G0018742) #9 Adgrv1 (MGP_CAROLIEiJ_G0018743) #10 Lysmd3 (MGP_CAROLIEiJ_G0018744) #12 Polr3g (MGP_CAROLIEiJ_G0018745) #13 Mblac2 (MGP_CAROLIEiJ_G0018746) #14 Cetn3 (MGP_CAROLIEiJ_G0018747) #15 Mef2c (MGP_CAROLIEiJ_G0018748) #16 Tmem161b (MGP_CAROLIEiJ_G0018749) #17 Ccnh (MGP_CAROLIEiJ_G0018750) #18 Rasa1 (MGP_CAROLIEiJ_G0018751) #19 Cox7c (MGP_CAROLIEiJ_G0018752) #20 Edil3 (MGP_CAROLIEiJ_G0018753) #22 Hapln1 (MGP_CAROLIEiJ_G0018754) #23 Vcan (MGP_CAROLIEiJ_G0018755) #24 Xrcc4 (MGP_CAROLIEiJ_G0018756) #25 Tmem167 (MGP_CAROLIEiJ_G0018757) #26 MGP_CAROLIEiJ_G0018758 Atp6ap1l (MGP_CAROLIEiJ_G0018759) #29 Rps23 (MGP_CAROLIEiJ_G0018760) #30 Atg10 (MGP_CAROLIEiJ_G0018761) #31 Ssbp2 (MGP_CAROLIEiJ_G0018762) #33 Acot12 (MGP_CAROLIEiJ_G0018763) #34 Zcchc9 (MGP_CAROLIEiJ_G0018764) #35 Ckmt2 (MGP_CAROLIEiJ_G0018765) #36 Rasgrf2 (MGP_CAROLIEiJ_G0018766) #37 Msh3 (MGP_CAROLIEiJ_G0018767) Dhfr (MGP_CAROLIEiJ_G0018768) Shrew mouse MODERN SPECIES 2 MGP_PahariEiJ_G0015817 Fam172a (MGP_PahariEiJ_G0015818) Pou5f2 (MGP_PahariEiJ_G0015819) Nr2f1 (MGP_PahariEiJ_G0015820) Arrdc3 (MGP_PahariEiJ_G0015821) #9 Adgrv1 (MGP_PahariEiJ_G0015822) #10 Lysmd3 (MGP_PahariEiJ_G0015823) #12 Polr3g (MGP_PahariEiJ_G0015824) #13 Mblac2 (MGP_PahariEiJ_G0015825) #14 Cetn3 (MGP_PahariEiJ_G0015826) #15 Mef2c (MGP_PahariEiJ_G0015827) #16 Tmem161b (MGP_PahariEiJ_G0015828) #17 Ccnh (MGP_PahariEiJ_G0015829) #18 Rasa1 (MGP_PahariEiJ_G0015830) #19 Cox7c (MGP_PahariEiJ_G0015831) #20 Edil3 (MGP_PahariEiJ_G0015832) #22 Hapln1 (MGP_PahariEiJ_G0015833) #23 Vcan (MGP_PahariEiJ_G0015834) #24 Xrcc4 (MGP_PahariEiJ_G0015835) #25 Tmem167 (MGP_PahariEiJ_G0015836) #26 Vmn1r75 (MGP_PahariEiJ_G0015837) Atp6ap1l (MGP_PahariEiJ_G0015838) #29 Rps23 (MGP_PahariEiJ_G0015839) #30 Atg10 (MGP_PahariEiJ_G0015840) #31 Ssbp2 (MGP_PahariEiJ_G0015841) #33 Acot12 (MGP_PahariEiJ_G0015842) #34 Zcchc9 (MGP_PahariEiJ_G0015843) #35 Ckmt2 (MGP_PahariEiJ_G0015844) #36 Rasgrf2 (MGP_PahariEiJ_G0015845) #37 Msh3 (MGP_PahariEiJ_G0015846) Dhfr (MGP_PahariEiJ_G0015847) Rat MODERN SPECIES 11 Arrdc3 (ENSRNOG00000045649) #9 ENSRNOG00000069696 Adgrv1 (ENSRNOG00000016306) #10 Lysmd3 (ENSRNOG00000016298) #12 Polr3g (ENSRNOG00000016260) #13 Mblac2 (ENSRNOG00000016252) #14 Cetn3 (ENSRNOG00000050877) #15 LOC120100658 (ENSRNOG00000065778) Mef2c (ENSRNOG00000033134) #16 AABR07007399.1 (ENSRNOG00000049010) Tmem161b (ENSRNOG00000032414) #17 Ccnh (ENSRNOG00000031656) #18 Rasa1 (ENSRNOG00000029185) #19 Cox7c (ENSRNOG00000030237) #20 ENSRNOG00000064811 Edil3 (ENSRNOG00000033064) #22 ENSRNOG00000062828 Hapln1 (ENSRNOG00000032002) #23 Vcan (ENSRNOG00000029212) #24 Xrcc4 (ENSRNOG00000029966) #25 Tmem167a (ENSRNOG00000016686) #26 Atp6ap1l (ENSRNOG00000040201) #29 Rps23 (ENSRNOG00000016580) ##30 Atg10 (ENSRNOG00000016342) #31 Ssbp2 (ENSRNOG00000016213) #33 Acot12 (ENSRNOG00000061414) #34 Zcchc9 (ENSRNOG00000051682) #35 Ckmt2 (ENSRNOG00000055450) #36 Rasgrf2 (ENSRNOG00000056151) #37 ENSRNOG00000064838 ENSRNOG00000069130 Upper Galilee mountains blind mole rat MODERN SPECIES 1658 Edil3 (ENSNGAG00000011097) #22 Hapln1 (ENSNGAG00000001309) #23 ENSNGAG00000003748 #24 Xrcc4 (ENSNGAG00000013424) #25 Tmem167 (ENSNGAG00000018278) #26 Atp6ap1l (ENSNGAG00000000435) #29 Rps23 (ENSNGAG00000006354) #30 Atg10 (ENSNGAG00000011883) #31 Ssbp2 (ENSNGAG00000011787) #33 Acot12 (ENSNGAG00000009467) #34 Zcchc9 (ENSNGAG00000017736) #35 Ckmt2 (ENSNGAG00000020619) #36 Rasgrf2 (ENSNGAG00000008843) #37 Msh3 (ENSNGAG00000014298) Dhfr (ENSNGAG00000018704) ENSNGAG00000019496 Lesser Egyptian jerboa MODERN SPECIES 45 ENSJJAG00000012827 #10 ENSJJAG00000021631 #10 ENSJJAG00000009537 #10 Lysmd3 (ENSJJAG00000023942) #12 ENSJJAG00000001250 Mblac2 (ENSJJAG00000005655) #14 Cetn3 (ENSJJAG00000023827) #15 Mef2c (ENSJJAG00000013244) #16 Tmem161b (ENSJJAG00000024009) #17 ENSJJAG00000011002 #18 Rasa1 (ENSJJAG00000012863) #19 ENSJJAG00000003776 #20 ENSJJAG00000001446 ENSJJAG00000023444 ENSJJAG00000012743 Edil3 (ENSJJAG00000010032) #22 Hapln1 (ENSJJAG00000012871) #23 ENSJJAG00000017589 #24 Xrcc4 (ENSJJAG00000013678) #25 ENSJJAG00000019023 #26 Atp6ap1l (ENSJJAG00000015522) #29 Rps23 (ENSJJAG00000014219) #30 Atg10 (ENSJJAG00000013587) #31 Ssbp2 (ENSJJAG00000010960) #33 Acot12 (ENSJJAG00000010888) #34 Zcchc9 (ENSJJAG00000015479) #35 Ckmt2 (ENSJJAG00000016214) #36 Rasgrf2 (ENSJJAG00000016070) #37 Msh3 (ENSJJAG00000021941) ENSJJAG00000011657 Ankrd34b (ENSJJAG00000000619) Kangaroo rat MODERN SPECIES 347 ENSDORG00000028809 Arrdc3 (ENSDORG00000027054) #9 Adgrv1 (ENSDORG00000006226) #10 Lysmd3 (ENSDORG00000002417) #12 ENSDORG00000002414 Mblac2 (ENSDORG00000002413) #14 Cetn3 (ENSDORG00000007233) #15 Mef2c (ENSDORG00000026015) #16 Tmem161b (ENSDORG00000012482) #17 Ccnh (ENSDORG00000001438) #18 Rasa1 (ENSDORG00000001435) #19 ENSDORG00000004968 Edil3 (ENSDORG00000000456) #22 ENSDORG00000026224 Hapln1 (ENSDORG00000015896) #23 ENSDORG00000023517 #24 Xrcc4 (ENSDORG00000015883) #25 Tmem167 (ENSDORG00000026989) #26 Atp6ap1l (ENSDORG00000025510) #29 Rps23 (ENSDORG00000001813) #30 Atg10 (ENSDORG00000009893) #31 ENSDORG00000024485 Ssbp2 (ENSDORG00000001305) #33 Acot12 (ENSDORG00000001303) #34 Zcchc9 (ENSDORG00000001300) #35 Ckmt2 (ENSDORG00000015691) #36 Rasgrf2 (ENSDORG00000001359) #37 Msh3 (ENSDORG00000005509) Rodentia_A ANCESTRAL SPECIES 7 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.a.b ##30 ENSGT01100000263873 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 Sciuridae ANCESTRAL SPECIES 18 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949.f ENSGT00390000010283 ENSGT00390000012355.A.a Marmotini ANCESTRAL SPECIES 23 ENSGT00610000086112 ENSGT00940000164293 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.hc #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949.f ENSGT00390000010283 ENSGT00390000012355.A.a Marmotini_b ANCESTRAL SPECIES 89 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.hc #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.k #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949.f ENSGT00390000010283 Arctic ground squirrel MODERN SPECIES 140 ENSUPAG00010007089 EDIL3 (ENSUPAG00010006995) #22 HAPLN1 (ENSUPAG00010006988) #23 ENSUPAG00010006947 #24 ENSUPAG00010006939 XRCC4 (ENSUPAG00010006926) #25 TMEM167A (ENSUPAG00010006916) #26 ENSUPAG00010006903 #29 RPS23 (ENSUPAG00010006892) #30 ATG10 (ENSUPAG00010006861) #31 SSBP2 (ENSUPAG00010006805) #33 ACOT12 (ENSUPAG00010006783) #34 CKMT2 (ENSUPAG00010006756) #36 ENSUPAG00010006730 #37 ENSUPAG00010006712 #37 ENSUPAG00010006689 Squirrel MODERN SPECIES 69 ENSSTOG00000019847 ARRDC3 (ENSSTOG00000020450) #9 ENSSTOG00000031315 #10 ENSSTOG00000034589 #10 LYSMD3 (ENSSTOG00000008678) #12 ENSSTOG00000008664 MBLAC2 (ENSSTOG00000023398) #14 CETN3 (ENSSTOG00000012271) #15 MEF2C (ENSSTOG00000001883) #16 ENSSTOG00000011141 #17 CCNH (ENSSTOG00000000659) #18 RASA1 (ENSSTOG00000000649) #19 COX7C (ENSSTOG00000034413) #20 ENSSTOG00000023841 ENSSTOG00000022943 EDIL3 (ENSSTOG00000003893) #22 HAPLN1 (ENSSTOG00000003875) #23 ENSSTOG00000026716 #24 XRCC4 (ENSSTOG00000023468) #25 ENSSTOG00000031235 #26 ENSSTOG00000005230 #29 ENSSTOG00000000824 ##30 ATG10 (ENSSTOG00000005212) #31 SSBP2 (ENSSTOG00000001418) #33 ACOT12 (ENSSTOG00000001413) #34 ZCCHC9 (ENSSTOG00000001407) #35 CKMT2 (ENSSTOG00000001399) #36 RASGRF2 (ENSSTOG00000001380) #37 MSH3 (ENSSTOG00000025220) ENSSTOG00000028494 Alpin marmot MODERN SPECIES 48 MEF2C (ENSMMMG00000008360) #16 ENSMMMG00000008337 ENSMMMG00000008322 #17 ENSMMMG00000008314 #17 ENSMMMG00000008302 CCNH (ENSMMMG00000008287) #18 RASA1 (ENSMMMG00000008245) #19 COX7C (ENSMMMG00000008226) #20 EDIL3 (ENSMMMG00000008149) #22 HAPLN1 (ENSMMMG00000008103) #23 ENSMMMG00000008014 #24 XRCC4 (ENSMMMG00000008004) #25 ENSMMMG00000007986 #26 ENSMMMG00000007968 #29 ENSMMMG00000007958 RPS23 (ENSMMMG00000007953) #30 ATG10 (ENSMMMG00000007945) #31 SSBP2 (ENSMMMG00000007897) #33 ACOT12 (ENSMMMG00000007863) #34 ZCCHC9 (ENSMMMG00000007846) #35 CKMT2 (ENSMMMG00000007828) #36 ENSMMMG00000007796 #37 MSH3 (ENSMMMG00000007726) ENSMMMG00000007718 Eurasian red squirrel MODERN SPECIES 15 ARRDC3 (ENSSVLG00005007017) #9 ENSSVLG00005007056 ADGRV1 (ENSSVLG00005007157) #10 ENSSVLG00005007509 LYSMD3 (ENSSVLG00005007523) #12 ENSSVLG00005007556 ENSSVLG00005007572 MBLAC2 (ENSSVLG00005007608) #14 CETN3 (ENSSVLG00005007638) #15 ENSSVLG00005007697 MEF2C (ENSSVLG00005007790) #16 TMEM161B (ENSSVLG00005007974) #17 CCNH (ENSSVLG00005008091) #18 RASA1 (ENSSVLG00005008223) #19 ENSSVLG00005008592 #20 EDIL3 (ENSSVLG00005008647) #22 HAPLN1 (ENSSVLG00005008777) #23 VCAN (ENSSVLG00005008932) #24 XRCC4 (ENSSVLG00005009326) #25 ENSSVLG00005009361 #26 ENSSVLG00005009400 #29 ENSSVLG00005009458 ##30 ATG10 (ENSSVLG00005009563) #31 SSBP2 (ENSSVLG00005009766) #33 ACOT12 (ENSSVLG00005010445) #34 ZCCHC9 (ENSSVLG00005010577) #35 CKMT2 (ENSSVLG00005010620) #36 RASGRF2 (ENSSVLG00005010807) #37 MSH3 (ENSSVLG00005010940) ENSSVLG00005011452 ANKRD34B (ENSSVLG00005011548) Hystricomorpha ANCESTRAL SPECIES 27 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.gc #10 ENSGT00940000158711 #12 ENSGT01100000264660.a ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Hystricomorpha_a ANCESTRAL SPECIES 24 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.gc #10 ENSGT00940000158711 #12 ENSGT01100000264660.a ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Hystricomorpha_b ANCESTRAL SPECIES 50 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.gc #10 ENSGT00940000158711 #12 ENSGT01100000264660.a ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Long-tailed chinchilla MODERN SPECIES 125 NR2F1 (ENSCLAG00000005596) ARRDC3 (ENSCLAG00000005661) #9 ENSCLAG00000005769 #10 ENSCLAG00000005851 #10 ENSCLAG00000006022 #10 LYSMD3 (ENSCLAG00000006052) #12 ENSCLAG00000006118 MBLAC2 (ENSCLAG00000006185) #14 CETN3 (ENSCLAG00000006215) #15 MEF2C (ENSCLAG00000003422) #16 ENSCLAG00000003728 TMEM161B (ENSCLAG00000003850) #17 CCNH (ENSCLAG00000004012) #18 RASA1 (ENSCLAG00000004110) #19 ENSCLAG00000004179 #20 EDIL3 (ENSCLAG00000004305) #22 HAPLN1 (ENSCLAG00000004483) #23 ENSCLAG00000004575 #24 XRCC4 (ENSCLAG00000004677) #25 TMEM167A (ENSCLAG00000004734) #26 Rps23 (ENSCLAG00000004798) #30 ENSCLAG00000004838 ATG10 (ENSCLAG00000004893) #31 SSBP2 (ENSCLAG00000004986) #33 ACOT12 (ENSCLAG00000005180) #34 ZCCHC9 (ENSCLAG00000005289) #35 CKMT2 (ENSCLAG00000005343) #36 RASGRF2 (ENSCLAG00000005490) #37 MSH3 (ENSCLAG00000006074) ENSCLAG00000005365 ANKRD34B (ENSCLAG00000017846) Degu MODERN SPECIES 170 TMEM161B (ENSODEG00000005530) #17 CCNH (ENSODEG00000005505) #18 RASA1 (ENSODEG00000005418) #19 ENSODEG00000019183 ENSODEG00000005383 #20 ENSODEG00000005376 ENSODEG00000005359 EDIL3 (ENSODEG00000005260) #22 HAPLN1 (ENSODEG00000005201) #23 ENSODEG00000005176 #24 ENSODEG00000005159 XRCC4 (ENSODEG00000005147) #25 ENSODEG00000005125 #26 ENSODEG00000005103 #29 RPS23 (ENSODEG00000005092) #30 ATG10 (ENSODEG00000005078) #31 SSBP2 (ENSODEG00000004975) #33 ACOT12 (ENSODEG00000004907) #34 ENSODEG00000004349 #35 CKMT2 (ENSODEG00000004322) #36 RASGRF2 (ENSODEG00000004227) #37 MSH3 (ENSODEG00000004134) FAM151B (ENSODEG00000004092) Guinea pig MODERN SPECIES 1 FAM172A (ENSCPOG00000013935) NR2F1 (ENSCPOG00000005883) ARRDC3 (ENSCPOG00000002749) #9 ENSCPOG00000030916 #10 ENSCPOG00000004008 #10 ENSCPOG00000035017 #10 LYSMD3 (ENSCPOG00000031696) #12 ENSCPOG00000036643 MBLAC2 (ENSCPOG00000036054) #14 CETN3 (ENSCPOG00000023805) #15 MEF2C (ENSCPOG00000035485) #16 TMEM161B (ENSCPOG00000003613) #17 CCNH (ENSCPOG00000007894) #18 RASA1 (ENSCPOG00000007883) #19 COX7C (ENSCPOG00000037322) ##20 EDIL3 (ENSCPOG00000006986) #22 HAPLN1 (ENSCPOG00000037148) #23 ENSCPOG00000039167 #24 XRCC4 (ENSCPOG00000012258) #25 TMEM167A (ENSCPOG00000026186) #26 ENSCPOG00000011131 #29 RPS23 (ENSCPOG00000037620) #30 ENSCPOG00000022705 ATG10 (ENSCPOG00000032098) #31 SSBP2 (ENSCPOG00000001712) #33 ACOT12 (ENSCPOG00000009718) #34 ZCCHC9 (ENSCPOG00000003947) #35 CKMT2 (ENSCPOG00000003941) #36 RASGRF2 (ENSCPOG00000006307) #37 MSH3 (ENSCPOG00000011122) ENSCPOG00000020993 Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000038073 #10 ENSHGLG00000036506 LYSMD3 (ENSHGLG00000039807) #12 ENSHGLG00000039707 MBLAC2 (ENSHGLG00000046616) #14 CETN3 (ENSHGLG00000036397) #15 MEF2C (ENSHGLG00000008715) #16 ENSHGLG00000042125 ENSHGLG00000002953 TMEM161B (ENSHGLG00000016157) #17 ENSHGLG00000012753 CCNH (ENSHGLG00000007779) #18 RASA1 (ENSHGLG00000005734) #19 ENSHGLG00000033884 COX7C (ENSHGLG00000032953) #20 EDIL3 (ENSHGLG00000013218) #22 HAPLN1 (ENSHGLG00000034114) #23 VCAN (ENSHGLG00000010244) #24 XRCC4 (ENSHGLG00000032875) #25 TMEM167A (ENSHGLG00000036731) #26 ENSHGLG00000036000 #29 ENSHGLG00000008165 ##30 ENSHGLG00000007844 #31 Lagomorpha ANCESTRAL SPECIES 52 ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000265337 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.x #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Rabbit MODERN SPECIES 2 LYSMD3 (ENSOCUG00000023323) #12 ENSOCUG00000010624 MBLAC2 (ENSOCUG00000026716) #14 CETN3 (ENSOCUG00000005711) #15 MEF2C (ENSOCUG00000029354) #16 TMEM161B (ENSOCUG00000005147) #17 ENSOCUG00000033164 ENSOCUG00000035816 CCNH (ENSOCUG00000004659) #18 RASA1 (ENSOCUG00000004646) #19 ENSOCUG00000039253 ##20 ENSOCUG00000006715 ENSOCUG00000002319 ENSOCUG00000029582 ENSOCUG00000029665 EDIL3 (ENSOCUG00000017338) #22 HAPLN1 (ENSOCUG00000002630) #23 VCAN (ENSOCUG00000002613) #24 XRCC4 (ENSOCUG00000015052) #25 ENSOCUG00000009326 #26 ENSOCUG00000014110 #29 ENSOCUG00000010363 #30 ENSOCUG00000008736 #31 ENSOCUG00000005365 #33 ACOT12 (ENSOCUG00000005358) #34 ZCCHC9 (ENSOCUG00000011215) #35 CKMT2 (ENSOCUG00000011211) #36 RASGRF2 (ENSOCUG00000003533) #37 MSH3 (ENSOCUG00000016921) ENSOCUG00000005127 ENSOCUG00000023992 Pika MODERN SPECIES 545 ENSOPRG00000016900 #22 ENSOPRG00000016896 #23 ENSOPRG00000016872 #24 Tree shrew MODERN SPECIES 3197 EDIL3 (ENSTBEG00000013547) #22 Primates ANCESTRAL SPECIES 8 ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Lemuriformes ANCESTRAL SPECIES 37 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000013899.a.a.d ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Mouse lemur MODERN SPECIES 3 RIOK2 (ENSMICG00000037437) RGMB (ENSMICG00000046794) CHD1 (ENSMICG00000003914) FAM174A (ENSMICG00000012302) ST8SIA4 (ENSMICG00000048096) SLCO4C1 (ENSMICG00000013545) SLCO6A1 (ENSMICG00000000142) PAM (ENSMICG00000004763) GIN1 (ENSMICG00000029753) PPIP5K2 (ENSMICG00000004779) MACIR (ENSMICG00000047126) ENSMICG00000036226 NUDT12 (ENSMICG00000036782) ENSMICG00000043126 COX7C (ENSMICG00000007888) #20 EDIL3 (ENSMICG00000014682) #22 HAPLN1 (ENSMICG00000034468) #23 VCAN (ENSMICG00000035948) #24 XRCC4 (ENSMICG00000031093) #25 TMEM167A (ENSMICG00000009860) #26 ENSMICG00000033898 ENSMICG00000013969 #29 RPS23 (ENSMICG00000034642) #30 ATG10 (ENSMICG00000032372) #31 SSBP2 (ENSMICG00000035810) #33 ACOT12 (ENSMICG00000047986) #34 ENSMICG00000029554 #35 CKMT2 (ENSMICG00000016259) #36 RASGRF2 (ENSMICG00000016229) #37 ENSMICG00000036427 MSH3 (ENSMICG00000016187) Lemuriformes_a ANCESTRAL SPECIES 43 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000013899.a.a.d ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Coquerels sifaka MODERN SPECIES 139 ADAMTS20 (ENSPCOG00000017667) PRICKLE1 (ENSPCOG00000006371) PPHLN1 (ENSPCOG00000025208) ZCRB1 (ENSPCOG00000022958) YAF2 (ENSPCOG00000021954) GXYLT1 (ENSPCOG00000024287) ENSPCOG00000017779 PDZRN4 (ENSPCOG00000015632) CNTN1 (ENSPCOG00000019694) LRRK2 (ENSPCOG00000024486) ENSPCOG00000008044 SLC2A13 (ENSPCOG00000013347) C12orf40 (ENSPCOG00000023054) ABCD2 (ENSPCOG00000021406) KIF21A (ENSPCOG00000015969) EDIL3 (ENSPCOG00000001568) #22 HAPLN1 (ENSPCOG00000023033) #23 VCAN (ENSPCOG00000028583) #24 RAB28 (ENSPCOG00000015364) NKX3-2 (ENSPCOG00000024252) BOD1L1 (ENSPCOG00000028312) ENSPCOG00000026440 CPEB2 (ENSPCOG00000027324) C1QTNF7 (ENSPCOG00000028186) CC2D2A (ENSPCOG00000027889) FBXL5 (ENSPCOG00000015397) BST1 (ENSPCOG00000021913) CD38 (ENSPCOG00000012225) PROM1 (ENSPCOG00000018268) TAPT1 (ENSPCOG00000000725) ENSPCOG00000004435 Greater bamboo lemur MODERN SPECIES 1770 EDIL3 (ENSPSMG00000015270) #22 Bushbaby MODERN SPECIES 132 ARRDC3 (ENSOGAG00000003067) #9 ADGRV1 (ENSOGAG00000012173) #10 LYSMD3 (ENSOGAG00000005564) #12 ENSOGAG00000005560 MBLAC2 (ENSOGAG00000005559) #14 CETN3 (ENSOGAG00000002383) #15 MEF2C (ENSOGAG00000028682) #16 ENSOGAG00000034873 TMEM161B (ENSOGAG00000009547) #17 ENSOGAG00000031737 ENSOGAG00000027160 CCNH (ENSOGAG00000010421) #18 RASA1 (ENSOGAG00000000055) #19 ENSOGAG00000029577 ENSOGAG00000032711 EDIL3 (ENSOGAG00000015620) #22 HAPLN1 (ENSOGAG00000009053) #23 VCAN (ENSOGAG00000034403) #24 XRCC4 (ENSOGAG00000009045) #25 TMEM167A (ENSOGAG00000009040) #26 ENSOGAG00000008165 #29 ENSOGAG00000008163 ##30 ATG10 (ENSOGAG00000008161) #31 SSBP2 (ENSOGAG00000002548) #33 ACOT12 (ENSOGAG00000002545) #34 ENSOGAG00000002543 #35 CKMT2 (ENSOGAG00000002541) #36 RASGRF2 (ENSOGAG00000002537) #37 MSH3 (ENSOGAG00000011410) ENSOGAG00000025320 ANKRD34B (ENSOGAG00000003348) Haplorrhini ANCESTRAL SPECIES 4 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000262760 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Tarsier MODERN SPECIES 5579 EDIL3 (ENSTSYG00000003269) #22 Simiiformes ANCESTRAL SPECIES 6 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00910000147249 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.a Catarrhini ANCESTRAL SPECIES 7 ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.a Hominoidea ANCESTRAL SPECIES 8 ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00390000007473.h ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.n #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.a Hominidae ANCESTRAL SPECIES 7 ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00390000007473.h ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.n #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00390000007473.h ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.n.a.a #20 ENSGT00390000018509.a.n.b ENSGT00390000018086.n.b #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.a Gorilla MODERN SPECIES 18 ARRDC3 (ENSGGOG00000004294) #9 ENSGGOG00000025546 ENSGGOG00000043133 ADGRV1 (ENSGGOG00000010968) #10 LYSMD3 (ENSGGOG00000043192) #12 POLR3G (ENSGGOG00000000266) MBLAC2 (ENSGGOG00000002845) #14 CETN3 (ENSGGOG00000009598) #15 MEF2C (ENSGGOG00000002856) #16 TMEM161B (ENSGGOG00000005684) #17 CCNH (ENSGGOG00000005172) #18 RASA1 (ENSGGOG00000001591) #19 ENSGGOG00000036539 COX7C (ENSGGOG00000012393) #20 ENSGGOG00000028128 EDIL3 (ENSGGOG00000025465) #22 ENSGGOG00000043369 HAPLN1 (ENSGGOG00000028491) #23 VCAN (ENSGGOG00000016068) #24 ENSGGOG00000040035 XRCC4 (ENSGGOG00000005197) #25 TMEM167A (ENSGGOG00000042218) #26 ENSGGOG00000013925 #29 RPS23 (ENSGGOG00000025014) #30 ENSGGOG00000026751 ATG10 (ENSGGOG00000013109) #31 ENSGGOG00000025646 SSBP2 (ENSGGOG00000026863) #33 ACOT12 (ENSGGOG00000009718) #34 ZCCHC9 (ENSGGOG00000013790) #35 CKMT2 (ENSGGOG00000005929) #36 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.n.a.a #20 ENSGT00390000018509.a.n.b ENSGT00390000018086.n.b #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.a Pan ANCESTRAL SPECIES 21 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000154276.hb.a.e.b.b ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.n.a.a #20 ENSGT00390000018509.a.n.b ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183087.A.a.b.b.g.f ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Chimpanzee MODERN SPECIES 18 ARRDC3 (ENSPTRG00000017072) #9 ENSPTRG00000052572 ADGRV1 (ENSPTRG00000017070) #10 ENSPTRG00000052859 LYSMD3 (ENSPTRG00000017069) #12 POLR3G (ENSPTRG00000017068) MBLAC2 (ENSPTRG00000017067) #14 CETN3 (ENSPTRG00000017066) #15 MEF2C (ENSPTRG00000024214) #16 TMEM161B (ENSPTRG00000017064) #17 CCNH (ENSPTRG00000017063) #18 RASA1 (ENSPTRG00000017062) #19 COX7C (ENSPTRG00000048661) #20 ENSPTRG00000001027 ENSPTRG00000046359 EDIL3 (ENSPTRG00000017057) #22 HAPLN1 (ENSPTRG00000017056) #23 VCAN (ENSPTRG00000017055) #24 ENSPTRG00000045929 XRCC4 (ENSPTRG00000017054) #25 ENSPTRG00000044846 TMEM167A (ENSPTRG00000044250) #26 ATP6AP1L (ENSPTRG00000050446) #29 RPS23 (ENSPTRG00000017052) #30 ATG10 (ENSPTRG00000017050) #31 ENSPTRG00000039784 ENSPTRG00000045633 SSBP2 (ENSPTRG00000017049) #33 ACOT12 (ENSPTRG00000017048) #34 ZCCHC9 (ENSPTRG00000017047) #35 CKMT2 (ENSPTRG00000024170) #36 Bonobo MODERN SPECIES 18 NR2F1 (ENSPPAG00000029692) ARRDC3 (ENSPPAG00000034772) #9 ENSPPAG00000024964 ADGRV1 (ENSPPAG00000034954) #10 ENSPPAG00000035937 LYSMD3 (ENSPPAG00000036100) #12 POLR3G (ENSPPAG00000038891) MBLAC2 (ENSPPAG00000030673) #14 CETN3 (ENSPPAG00000042285) #15 MEF2C (ENSPPAG00000039315) #16 TMEM161B (ENSPPAG00000034458) #17 CCNH (ENSPPAG00000034768) #18 RASA1 (ENSPPAG00000031210) #19 ENSPPAG00000033965 #20 ENSPPAG00000028873 EDIL3 (ENSPPAG00000034784) #22 HAPLN1 (ENSPPAG00000037621) #23 VCAN (ENSPPAG00000026050) #24 ENSPPAG00000015511 XRCC4 (ENSPPAG00000040322) #25 TMEM167A (ENSPPAG00000043917) #26 ENSPPAG00000038667 #29 RPS23 (ENSPPAG00000043006) #30 ATG10 (ENSPPAG00000033287) #31 ENSPPAG00000004621 ENSPPAG00000039772 SSBP2 (ENSPPAG00000030611) #33 ACOT12 (ENSPPAG00000041212) #34 ZCCHC9 (ENSPPAG00000041281) #35 CKMT2 (ENSPPAG00000040035) #36 RASGRF2 (ENSPPAG00000043533) #37 Human MODERN SPECIES 17 KIAA0825 (ENSG00000185261) POU5F2 (ENSG00000248483) FAM172A (ENSG00000113391) NR2F1 (ENSG00000175745) ARRDC3 (ENSG00000113369) #9 ADGRV1 (ENSG00000164199) #10 LYSMD3 (ENSG00000176018) #12 POLR3G (ENSG00000113356) MBLAC2 (ENSG00000176055) #14 CETN3 (ENSG00000153140) #15 MEF2C (ENSG00000081189) #16 TMEM161B (ENSG00000164180) #17 CCNH (ENSG00000134480) #18 RASA1 (ENSG00000145715) #19 COX7C (ENSG00000127184) #20 EDIL3 (ENSG00000164176) #22 HAPLN1 (ENSG00000145681) #23 VCAN (ENSG00000038427) #24 XRCC4 (ENSG00000152422) #25 TMEM167A (ENSG00000174695) #26 RPS23 (ENSG00000186468) #30 ATG10 (ENSG00000152348) #31 SSBP2 (ENSG00000145687) #33 ACOT12 (ENSG00000172497) #34 ZCCHC9 (ENSG00000131732) #35 CKMT2 (ENSG00000131730) #36 RASGRF2 (ENSG00000113319) #37 MSH3 (ENSG00000113318) DHFR (ENSG00000228716) ANKRD34B (ENSG00000189127) FAM151B (ENSG00000152380) Orangutan MODERN SPECIES 18 NR2F1 (ENSPPYG00000015629) ENSPPYG00000031067 ARRDC3 (ENSPPYG00000015628) #9 ENSPPYG00000015627 ADGRV1 (ENSPPYG00000015626) #10 ENSPPYG00000031868 #12 POLR3G (ENSPPYG00000015624) MBLAC2 (ENSPPYG00000033594) #14 CETN3 (ENSPPYG00000015622) #15 MEF2C (ENSPPYG00000033322) #16 TMEM161B (ENSPPYG00000015620) #17 CCNH (ENSPPYG00000015619) #18 RASA1 (ENSPPYG00000015618) #19 ENSPPYG00000030583 COX7C (ENSPPYG00000015616) #20 EDIL3 (ENSPPYG00000015615) #22 HAPLN1 (ENSPPYG00000015614) #23 VCAN (ENSPPYG00000015613) #24 XRCC4 (ENSPPYG00000015612) #25 TMEM167A (ENSPPYG00000031892) #26 ENSPPYG00000015609 #29 RPS23 (ENSPPYG00000030974) #30 ATG10 (ENSPPYG00000015607) #31 SSBP2 (ENSPPYG00000015606) #33 ENSPPYG00000015605 #34 ZCCHC9 (ENSPPYG00000015604) #35 CKMT2 (ENSPPYG00000015603) #36 RASGRF2 (ENSPPYG00000015602) #37 MSH3 (ENSPPYG00000015601) DHFR (ENSPPYG00000036301) ANKRD34B (ENSPPYG00000015599) Gibbon MODERN SPECIES 11 ENSNLEG00000034584 ADGRV1 (ENSNLEG00000013776) #10 LYSMD3 (ENSNLEG00000013761) #12 ENSNLEG00000032117 POLR3G (ENSNLEG00000034746) MBLAC2 (ENSNLEG00000013746) #14 CETN3 (ENSNLEG00000027875) #15 MEF2C (ENSNLEG00000013673) #16 TMEM161B (ENSNLEG00000013645) #17 CCNH (ENSNLEG00000013604) #18 RASA1 (ENSNLEG00000013467) #19 ENSNLEG00000033043 ENSNLEG00000027612 #20 ENSNLEG00000013459 ENSNLEG00000032525 EDIL3 (ENSNLEG00000013418) #22 ENSNLEG00000035592 HAPLN1 (ENSNLEG00000013393) #23 VCAN (ENSNLEG00000013300) #24 ENSNLEG00000032670 XRCC4 (ENSNLEG00000013239) #25 TMEM167A (ENSNLEG00000013231) #26 ENSNLEG00000027406 ENSNLEG00000013214 #29 RPS23 (ENSNLEG00000013203) #30 ATG10 (ENSNLEG00000013189) #31 SSBP2 (ENSNLEG00000013116) #33 ACOT12 (ENSNLEG00000013095) #34 ZCCHC9 (ENSNLEG00000029214) #35 CKMT2 (ENSNLEG00000013077) #36 RASGRF2 (ENSNLEG00000013038) #37 Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.o.b #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00390000012652.ab.b ENSGT00550000074949 Rhinopithecus ANCESTRAL SPECIES 511 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00910000147249 ENSGT00940000156102 #24 ENSGT00940000155367.x ENSGT00390000017079 #25 ENSGT00940000155186.z #26 ENSGT00390000004856.w.a.b.a Black snub-nosed monkey MODERN SPECIES 1135 ENSRBIG00000034034 EDIL3 (ENSRBIG00000037089) #22 ENSRBIG00000007190 ENSRBIG00000005321 ENSRBIG00000041948 HAPLN1 (ENSRBIG00000034867) #23 ENSRBIG00000027612 VCAN (ENSRBIG00000031473) #24 Golden snub-nosed monkey MODERN SPECIES 1935 ENSRROG00000043741 EDIL3 (ENSRROG00000045105) #22 ENSRROG00000001366 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00530000063169.a.b ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.o.b.a #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000004856.w.a.b ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Vervet Monkey MODERN SPECIES 23 POU5F2 (ENSCSAG00000019424) NR2F1 (ENSCSAG00000014638) ENSCSAG00000014656 ARRDC3 (ENSCSAG00000014681) #9 ADGRV1 (ENSCSAG00000014718) #10 LYSMD3 (ENSCSAG00000014732) #12 ENSCSAG00000014737 MBLAC2 (ENSCSAG00000014742) #14 CETN3 (ENSCSAG00000014746) #15 MEF2C (ENSCSAG00000014772) #16 ENSCSAG00000019423 CCNH (ENSCSAG00000014778) #18 RASA1 (ENSCSAG00000014793) #19 ENSCSAG00000014810 #20 ENSCSAG00000014822 EDIL3 (ENSCSAG00000014835) #22 ENSCSAG00000014846 HAPLN1 (ENSCSAG00000014853) #23 VCAN (ENSCSAG00000014887) #24 XRCC4 (ENSCSAG00000014902) #25 TMEM167A (ENSCSAG00000014909) #26 ENSCSAG00000019422 ENSCSAG00000014915 #29 ENSCSAG00000014919 #30 ATG10 (ENSCSAG00000014925) #31 SSBP2 (ENSCSAG00000014933) #33 ACOT12 (ENSCSAG00000014944) #34 ENSCSAG00000014955 #35 CKMT2 (ENSCSAG00000014966) #36 RASGRF2 (ENSCSAG00000014982) #37 MSH3 (ENSCSAG00000015082) Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00530000063169.a.b ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.o.b.a #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000004856.w.a.b ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Macaca ANCESTRAL SPECIES 7 ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.o.b.a #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000004856.w.a.b ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Macaca_a ANCESTRAL SPECIES 8 ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00940000166143.A.a.b.b.b.b.a.b.a.a ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00940000170471.I.b ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.o.b.a #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000004856.w.a.b ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.a.c Crab-eating macaque MODERN SPECIES 16 ADGRV1 (ENSMFAG00000032687) #10 LYSMD3 (ENSMFAG00000034572) #12 POLR3G (ENSMFAG00000057504) MBLAC2 (ENSMFAG00000001314) #14 CETN3 (ENSMFAG00000036901) #15 ENSMFAG00000060678 MEF2C (ENSMFAG00000044479) #16 ENSMFAG00000058851 TMEM161B (ENSMFAG00000043023) #17 CCNH (ENSMFAG00000008721) #18 RASA1 (ENSMFAG00000037698) #19 COX7C (ENSMFAG00000035190) #20 ENSMFAG00000063591 ENSMFAG00000048019 ENSMFAG00000059027 EDIL3 (ENSMFAG00000039875) #22 HAPLN1 (ENSMFAG00000047220) #23 VCAN (ENSMFAG00000032675) #24 XRCC4 (ENSMFAG00000013259) #25 TMEM167A (ENSMFAG00000064295) #26 ENSMFAG00000030373 ENSMFAG00000045507 #29 RPS23 (ENSMFAG00000046092) #30 ATG10 (ENSMFAG00000031807) #31 SSBP2 (ENSMFAG00000044245) #33 ACOT12 (ENSMFAG00000000202) #34 ZCCHC9 (ENSMFAG00000001943) #35 CKMT2 (ENSMFAG00000000490) #36 RASGRF2 (ENSMFAG00000003054) #37 ENSMFAG00000060013 ENSMFAG00000061632 Rhesus MODERN SPECIES 16 ADGRV1 (ENSMMUG00000018976) #10 LYSMD3 (ENSMMUG00000018974) #12 POLR3G (ENSMMUG00000018972) MBLAC2 (ENSMMUG00000056954) #14 CETN3 (ENSMMUG00000020180) #15 MEF2C (ENSMMUG00000019836) #16 ENSMMUG00000053232 ENSMMUG00000062486 TMEM161B (ENSMMUG00000009319) #17 CCNH (ENSMMUG00000003248) #18 RASA1 (ENSMMUG00000003245) #19 COX7C (ENSMMUG00000040409) #20 ENSMMUG00000063160 ENSMMUG00000039961 ENSMMUG00000051689 EDIL3 (ENSMMUG00000007661) #22 HAPLN1 (ENSMMUG00000061282) #23 VCAN (ENSMMUG00000011513) #24 XRCC4 (ENSMMUG00000064265) #25 TMEM167A (ENSMMUG00000046560) #26 ATP6AP1L (ENSMMUG00000029954) #29 RPS23 (ENSMMUG00000003578) #30 ATG10 (ENSMMUG00000003577) #31 SSBP2 (ENSMMUG00000017583) #33 ACOT12 (ENSMMUG00000020656) #34 ZCCHC9 (ENSMMUG00000020655) #35 CKMT2 (ENSMMUG00000006932) #36 RASGRF2 (ENSMMUG00000039944) #37 MSH3 (ENSMMUG00000018284) ENSMMUG00000018283 ANKRD34B (ENSMMUG00000019460) Pig-tailed macaque MODERN SPECIES 533 CCNH (ENSMNEG00000041575) #18 RASA1 (ENSMNEG00000028470) #19 ENSMNEG00000044013 #20 ENSMNEG00000028341 EDIL3 (ENSMNEG00000042863) #22 HAPLN1 (ENSMNEG00000030175) #23 VCAN (ENSMNEG00000036869) #24 ENSMNEG00000043712 XRCC4 (ENSMNEG00000045552) #25 TMEM167A (ENSMNEG00000041326) #26 ENSMNEG00000008902 #29 ENSMNEG00000034342 ##30 ATG10 (ENSMNEG00000042013) #31 SSBP2 (ENSMNEG00000029101) #33 ACOT12 (ENSMNEG00000044852) #34 ZCCHC9 (ENSMNEG00000040582) #35 CKMT2 (ENSMNEG00000029549) #36 RASGRF2 (ENSMNEG00000029381) #37 MSH3 (ENSMNEG00000032256) ENSMNEG00000033103 Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00910000147795 ENSGT00950000183105.B.b ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.o.b.a #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000004856.w.a.b ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 Olive baboon MODERN SPECIES 15 MBLAC2 (ENSPANG00000001530) #14 CETN3 (ENSPANG00000010181) #15 ENSPANG00000046555 ENSPANG00000044443 MEF2C (ENSPANG00000010944) #16 ENSPANG00000037642 ENSPANG00000049972 TMEM161B (ENSPANG00000004600) #17 CCNH (ENSPANG00000023952) #18 RASA1 (ENSPANG00000017878) #19 ENSPANG00000040921 #20 ENSPANG00000051054 ENSPANG00000047004 ENSPANG00000038247 ENSPANG00000046816 EDIL3 (ENSPANG00000002875) #22 HAPLN1 (ENSPANG00000043592) #23 VCAN (ENSPANG00000000300) #24 XRCC4 (ENSPANG00000003281) #25 TMEM167A (ENSPANG00000049105) #26 ENSPANG00000030703 #29 RPS23 (ENSPANG00000013597) #30 ATG10 (ENSPANG00000003860) #31 ENSPANG00000041391 SSBP2 (ENSPANG00000023319) #33 ACOT12 (ENSPANG00000025089) #34 ZCCHC9 (ENSPANG00000013570) #35 CKMT2 (ENSPANG00000011809) #36 RASGRF2 (ENSPANG00000010568) #37 MSH3 (ENSPANG00000017879) ENSPANG00000007428 Cercopithecinae_d ANCESTRAL SPECIES 48 ENSGT00910000147795 ENSGT00950000183105.B.b ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.e.a #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.o.b.a #20 ENSGT00910000147325 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00910000147249 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00390000004856.w.a.b ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Sooty mangabey MODERN SPECIES 296 ENSCATG00000033426 ENSCATG00000037605 ARRDC3 (ENSCATG00000011987) #9 ENSCATG00000013474 ADGRV1 (ENSCATG00000042370) #10 LYSMD3 (ENSCATG00000028915) #12 ENSCATG00000044864 MBLAC2 (ENSCATG00000019268) #14 CETN3 (ENSCATG00000031135) #15 MEF2C (ENSCATG00000041293) #16 TMEM161B (ENSCATG00000042980) #17 CCNH (ENSCATG00000041554) #18 RASA1 (ENSCATG00000014585) #19 ENSCATG00000034062 #20 ENSCATG00000035380 EDIL3 (ENSCATG00000036627) #22 HAPLN1 (ENSCATG00000037967) #23 VCAN (ENSCATG00000033955) #24 ENSCATG00000045056 XRCC4 (ENSCATG00000031467) #25 TMEM167A (ENSCATG00000038227) #26 ENSCATG00000040706 #29 ENSCATG00000041062 ##30 ATG10 (ENSCATG00000032132) #31 SSBP2 (ENSCATG00000042579) #33 ACOT12 (ENSCATG00000041450) #34 ZCCHC9 (ENSCATG00000042586) #35 CKMT2 (ENSCATG00000035078) #36 RASGRF2 (ENSCATG00000030532) #37 MSH3 (ENSCATG00000033755) ENSCATG00000042395 Drill MODERN SPECIES 1209 ENSMLEG00000023884 EDIL3 (ENSMLEG00000032436) #22 HAPLN1 (ENSMLEG00000030540) #23 VCAN (ENSMLEG00000035624) #24 ENSMLEG00000039919 XRCC4 (ENSMLEG00000037000) #25 TMEM167A (ENSMLEG00000028609) #26 ENSMLEG00000022512 ENSMLEG00000038446 #29 ENSMLEG00000034613 ##30 ENSMLEG00000034472 #31 Platyrrhini ANCESTRAL SPECIES 7 ENSGT00390000003924.r ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.q.b #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00910000147249 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.b.a Mas night monkey MODERN SPECIES 992 ENSANAG00000024012 ENSANAG00000033833 ENSANAG00000030581 ARRDC3 (ENSANAG00000025287) #9 ADGRV1 (ENSANAG00000015354) #10 LYSMD3 (ENSANAG00000026299) #12 POLR3G (ENSANAG00000005030) MBLAC2 (ENSANAG00000025030) #14 CETN3 (ENSANAG00000023255) #15 MEF2C (ENSANAG00000037478) #16 ENSANAG00000019321 TMEM161B (ENSANAG00000027071) #17 CCNH (ENSANAG00000037104) #18 RASA1 (ENSANAG00000029874) #19 COX7C (ENSANAG00000030476) #20 EDIL3 (ENSANAG00000024200) #22 HAPLN1 (ENSANAG00000036107) #23 VCAN (ENSANAG00000027105) #24 XRCC4 (ENSANAG00000032084) #25 TMEM167A (ENSANAG00000036200) #26 ENSANAG00000035867 ENSANAG00000027961 ENSANAG00000033330 #29 RPS23 (ENSANAG00000019218) #30 ATG10 (ENSANAG00000029651) #31 SSBP2 (ENSANAG00000021537) #33 ACOT12 (ENSANAG00000032859) #34 ZCCHC9 (ENSANAG00000021689) #35 CKMT2 (ENSANAG00000037627) #36 RASGRF2 (ENSANAG00000028680) #37 ENSANAG00000035978 Cebidae ANCESTRAL SPECIES 6 ENSGT00530000063907.c ENSGT00390000003924.r ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.q.b #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00910000147249 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.`b.a.b.a Marmoset MODERN SPECIES 11 ARRDC3 (ENSCJAG00000010525) #9 ADGRV1 (ENSCJAG00000010578) #10 LYSMD3 (ENSCJAG00000066019) #12 ENSCJAG00000010747 MBLAC2 (ENSCJAG00000039786) #14 CETN3 (ENSCJAG00000010761) #15 MEF2C (ENSCJAG00000010799) #16 ENSCJAG00000084377 TMEM161B (ENSCJAG00000041282) #17 CCNH (ENSCJAG00000010902) #18 RASA1 (ENSCJAG00000010941) #19 ENSCJAG00000087022 #20 ENSCJAG00000083390 ENSCJAG00000072368 ENSCJAG00000073835 EDIL3 (ENSCJAG00000040007) #22 ENSCJAG00000077518 ENSCJAG00000085055 HAPLN1 (ENSCJAG00000063471) #23 ENSCJAG00000078201 VCAN (ENSCJAG00000011161) #24 XRCC4 (ENSCJAG00000011227) #25 ENSCJAG00000077051 #26 ENSCJAG00000042632 #29 RPS23 (ENSCJAG00000011247) #30 ENSCJAG00000072035 ENSCJAG00000062963 SSBP2 (ENSCJAG00000019418) #33 ENSCJAG00000072994 ACOT12 (ENSCJAG00000019453) #34 ENSCJAG00000072298 Cebidae_a ANCESTRAL SPECIES 3 ENSGT00530000063907.c ENSGT00390000003924.r ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00910000146984 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000164875 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.q.b #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00910000147249 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT01100000266943 ENSGT00940000161999.t.a.a.b.b.a ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C.c.a #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 Bolivian squirrel monkey MODERN SPECIES 43 ARRDC3 (ENSSBOG00000022253) #9 ADGRV1 (ENSSBOG00000031018) #10 LYSMD3 (ENSSBOG00000036033) #12 ENSSBOG00000029447 MBLAC2 (ENSSBOG00000022218) #14 CETN3 (ENSSBOG00000033177) #15 MEF2C (ENSSBOG00000018897) #16 ENSSBOG00000031181 ENSSBOG00000019037 TMEM161B (ENSSBOG00000024706) #17 ENSSBOG00000028202 CCNH (ENSSBOG00000019490) #18 RASA1 (ENSSBOG00000024025) #19 COX7C (ENSSBOG00000023483) #20 ENSSBOG00000022503 EDIL3 (ENSSBOG00000034196) #22 HAPLN1 (ENSSBOG00000020151) #23 VCAN (ENSSBOG00000030525) #24 XRCC4 (ENSSBOG00000033444) #25 TMEM167A (ENSSBOG00000031099) #26 ENSSBOG00000033727 ENSSBOG00000035740 ENSSBOG00000034795 ENSSBOG00000025673 ENSSBOG00000019560 #29 RPS23 (ENSSBOG00000025991) #30 ATG10 (ENSSBOG00000032903) #31 ENSSBOG00000032482 SSBP2 (ENSSBOG00000026483) #33 ACOT12 (ENSSBOG00000032766) #34 ENSSBOG00000034293 #35 Capuchin MODERN SPECIES 16 ADGRV1 (ENSCCAG00000034134) #10 LYSMD3 (ENSCCAG00000032472) #12 POLR3G (ENSCCAG00000032288) MBLAC2 (ENSCCAG00000027096) #14 CETN3 (ENSCCAG00000021491) #15 ENSCCAG00000030581 MEF2C (ENSCCAG00000015818) #16 TMEM161B (ENSCCAG00000025610) #17 ENSCCAG00000033383 CCNH (ENSCCAG00000031898) #18 RASA1 (ENSCCAG00000027537) #19 ENSCCAG00000012037 ENSCCAG00000034902 COX7C (ENSCCAG00000021409) #20 ENSCCAG00000036566 EDIL3 (ENSCCAG00000010698) #22 HAPLN1 (ENSCCAG00000023370) #23 ENSCCAG00000029740 VCAN (ENSCCAG00000026158) #24 XRCC4 (ENSCCAG00000021185) #25 TMEM167A (ENSCCAG00000021704) #26 ENSCCAG00000035743 ENSCCAG00000037444 ENSCCAG00000032509 ENSCCAG00000032614 #29 RPS23 (ENSCCAG00000022444) #30 ENSCCAG00000023908 ATG10 (ENSCCAG00000021612) #31 SSBP2 (ENSCCAG00000029743) #33 ACOT12 (ENSCCAG00000010251) #34 ZCCHC9 (ENSCCAG00000034082) #35 Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.a.b ##30 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000158144 #22 Hedgehog MODERN SPECIES 5757 EDIL3 (ENSEEUG00000001730) #22 Common shrew MODERN SPECIES 4474 EDIL3 (ENSSARG00000003465) #22 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.a.b ##30 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 Artiodactyla ANCESTRAL SPECIES 8 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z #20 ENSGT00740000115534.a.b.f.a.b ENSGT00390000018086.y.a #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 Suina ANCESTRAL SPECIES 11 ENSGT00940000164293 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000264016 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z #20 ENSGT00390000018086.y.a #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Pig MODERN SPECIES 10 ARRDC3 (ENSSSCG00000014156) #9 ADGRV1 (ENSSSCG00000035025) #10 LYSMD3 (ENSSSCG00000024193) #12 ENSSSCG00000026233 MBLAC2 (ENSSSCG00000014152) #14 CETN3 (ENSSSCG00000014151) #15 MEF2C (ENSSSCG00000014149) #16 ENSSSCG00000050823 TMEM161B (ENSSSCG00000014148) #17 ENSSSCG00000048763 CCNH (ENSSSCG00000014147) #18 RASA1 (ENSSSCG00000014146) #19 ENSSSCG00000053558 COX7C (ENSSSCG00000040325) #20 ENSSSCG00000061130 EDIL3 (ENSSSCG00000026780) #22 HAPLN1 (ENSSSCG00000014137) #23 ENSSSCG00000038060 VCAN (ENSSSCG00000014136) #24 ENSSSCG00000045510 TMEM167A (ENSSSCG00000056442) #26 ENSSSCG00000057529 ENSSSCG00000047325 ENSSSCG00000014132 #29 RPS23 (ENSSSCG00000014133) #30 ENSSSCG00000049576 ATG10 (ENSSSCG00000025210) #31 SSBP2 (ENSSSCG00000035757) #33 ACOT12 (ENSSSCG00000036095) #34 ZCCHC9 (ENSSSCG00000014129) #35 CKMT2 (ENSSSCG00000014128) #36 Chacoan peccary MODERN SPECIES 204 KIAA0825 (ENSCWAG00000019715) ENSCWAG00000019685 FAM172A (ENSCWAG00000019628) NR2F1 (ENSCWAG00000019554) ARRDC3 (ENSCWAG00000019512) #9 ADGRV1 (ENSCWAG00000019126) #10 LYSMD3 (ENSCWAG00000019073) #12 ENSCWAG00000019055 MBLAC2 (ENSCWAG00000019036) #14 CETN3 (ENSCWAG00000019002) #15 MEF2C (ENSCWAG00000018755) #16 TMEM161B (ENSCWAG00000018662) #17 CCNH (ENSCWAG00000018608) #18 RASA1 (ENSCWAG00000018315) #19 COX7C (ENSCWAG00000018267) #20 EDIL3 (ENSCWAG00000018152) #22 HAPLN1 (ENSCWAG00000018099) #23 VCAN (ENSCWAG00000017930) #24 XRCC4 (ENSCWAG00000017866) #25 TMEM167A (ENSCWAG00000017841) #26 ENSCWAG00000017781 #29 RPS23 (ENSCWAG00000017751) #30 ATG10 (ENSCWAG00000017706) #31 SSBP2 (ENSCWAG00000017558) #33 ACOT12 (ENSCWAG00000017413) #34 ZCCHC9 (ENSCWAG00000017376) #35 CKMT2 (ENSCWAG00000017315) #36 RASGRF2 (ENSCWAG00000017055) #37 MSH3 (ENSCWAG00000013447) ENSCWAG00000013255 ANKRD34B (ENSCWAG00000013240) Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z #20 ENSGT00740000115534.a.b.f.a.b ENSGT00390000018086.y.a #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 Cetacea ANCESTRAL SPECIES 1 ENSGT00940000154925.h ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00960000190376.a ENSGT00940000157995 #15 ENSGT00510000047137.c.b ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.y.a #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.k.a.a Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000155411.c #9 ENSGT01000000220781 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00960000190376.a ENSGT00940000157995 #15 ENSGT00510000047137.c.b ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.y.a #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.k.a.a Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000155411.c #9 ENSGT01000000220781 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00960000190376.a ENSGT00940000157995 #15 ENSGT00510000047137.c.b ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.y.a #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.s.b #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.k.a.a Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000155411.c #9 ENSGT01000000220781 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00960000190376.a ENSGT00940000157995 #15 ENSGT00510000047137.c.b ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.y.a.c #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.s.b #26 ENSGT00940000154612.n ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Monodontidae ANCESTRAL SPECIES 7 ENSGT00940000155411.c #9 ENSGT01000000220781 ENSGT00940000154880.lb #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00960000190376.a ENSGT00940000157995 #15 ENSGT00510000047137.c.b ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.y.a.c #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t #26 ENSGT00940000155186.s.b #26 ENSGT00940000154612.n ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 Narwhal MODERN SPECIES 298 ARRDC3 (ENSMMNG00015006011) #9 ENSMMNG00015006000 ADGRV1 (ENSMMNG00015005901) #10 LYSMD3 (ENSMMNG00015005843) #12 ENSMMNG00015005829 MBLAC2 (ENSMMNG00015005814) #14 ENSMMNG00015005807 CETN3 (ENSMMNG00015005786) #15 ENSMMNG00015005764 MEF2C (ENSMMNG00015005678) #16 ENSMMNG00015005616 TMEM161B (ENSMMNG00015005563) #17 CCNH (ENSMMNG00015005516) #18 RASA1 (ENSMMNG00015005429) #19 ENSMMNG00015005384 #20 EDIL3 (ENSMMNG00015005343) #22 ENSMMNG00015005323 HAPLN1 (ENSMMNG00015005308) #23 VCAN (ENSMMNG00015005267) #24 ENSMMNG00015005224 XRCC4 (ENSMMNG00015005213) #25 ENSMMNG00015005197 #26 ENSMMNG00015009107 ENSMMNG00015009097 #29 ENSMMNG00015009087 #30 ATG10 (ENSMMNG00015009080) #31 SSBP2 (ENSMMNG00015009022) #33 ACOT12 (ENSMMNG00015008974) #34 ZCCHC9 (ENSMMNG00015008963) #35 CKMT2 (ENSMMNG00015008945) #36 RASGRF2 (ENSMMNG00015008907) #37 Beluga whale MODERN SPECIES 71 ARRDC3 (ENSDLEG00000012589) #9 ENSDLEG00000012603 ENSDLEG00000012615 #10 ENSDLEG00000012741 #10 LYSMD3 (ENSDLEG00000012794) #12 POLR3G (ENSDLEG00000012841) MBLAC2 (ENSDLEG00000012852) #14 ENSDLEG00000012856 CETN3 (ENSDLEG00000012868) #15 MEF2C (ENSDLEG00000012940) #16 ENSDLEG00000012966 TMEM161B (ENSDLEG00000012991) #17 CCNH (ENSDLEG00000013031) #18 RASA1 (ENSDLEG00000013059) #19 ENSDLEG00000013150 #20 EDIL3 (ENSDLEG00000013171) #22 HAPLN1 (ENSDLEG00000013237) #23 VCAN (ENSDLEG00000013258) #24 XRCC4 (ENSDLEG00000013308) #25 ENSDLEG00000013342 #26 ENSDLEG00000013363 RPS23 (ENSDLEG00000013381) ##30 ATG10 (ENSDLEG00000013394) #31 SSBP2 (ENSDLEG00000013445) #33 ACOT12 (ENSDLEG00000013510) #34 ZCCHC9 (ENSDLEG00000013535) #35 CKMT2 (ENSDLEG00000013554) #36 RASGRF2 (ENSDLEG00000013582) #37 MSH3 (ENSDLEG00000013710) DHFR (ENSDLEG00000013740) ANKRD34B (ENSDLEG00000013781) Vaquita MODERN SPECIES 14 ENSPSNG00000001514 ENSPSNG00000001530 ARRDC3 (ENSPSNG00000001549) #9 ADGRV1 (ENSPSNG00000001637) #10 LYSMD3 (ENSPSNG00000001854) #12 ENSPSNG00000001891 MBLAC2 (ENSPSNG00000001913) #14 ENSPSNG00000001923 CETN3 (ENSPSNG00000001948) #15 MEF2C (ENSPSNG00000002155) #16 ENSPSNG00000002482 TMEM161B (ENSPSNG00000002519) #17 CCNH (ENSPSNG00000002571) #18 RASA1 (ENSPSNG00000002638) #19 ENSPSNG00000002806 #20 EDIL3 (ENSPSNG00000002853) #22 ENSPSNG00000002915 HAPLN1 (ENSPSNG00000002928) #23 VCAN (ENSPSNG00000002974) #24 XRCC4 (ENSPSNG00000003042) #25 ENSPSNG00000003056 TMEM167A (ENSPSNG00000003071) #26 ENSPSNG00000003094 RPS23 (ENSPSNG00000003143) #30 ATG10 (ENSPSNG00000003163) #31 SSBP2 (ENSPSNG00000003238) #33 ACOT12 (ENSPSNG00000003353) #34 ZCCHC9 (ENSPSNG00000003398) #35 CKMT2 (ENSPSNG00000003429) #36 RASGRF2 (ENSPSNG00000003476) #37 MSH3 (ENSPSNG00000003545) Dolphin MODERN SPECIES 1509 EDIL3 (ENSTTRG00000013008) #22 Sperm whale MODERN SPECIES 19 ENSPCTG00005007095 ADGRV1 (ENSPCTG00005006712) #10 LYSMD3 (ENSPCTG00005006625) #12 POLR3G (ENSPCTG00005006608) MBLAC2 (ENSPCTG00005006581) #14 CETN3 (ENSPCTG00005006544) #15 MEF2C (ENSPCTG00005006331) #16 ENSPCTG00005006281 TMEM161B (ENSPCTG00005006187) #17 ENSPCTG00005006131 ENSPCTG00005006111 CCNH (ENSPCTG00005006072) #18 RASA1 (ENSPCTG00005005901) #19 COX7C (ENSPCTG00005005822) #20 ENSPCTG00005005787 EDIL3 (ENSPCTG00005005744) #22 ENSPCTG00005005670 HAPLN1 (ENSPCTG00005005652) #23 VCAN (ENSPCTG00005005066) #24 XRCC4 (ENSPCTG00005004952) #25 ENSPCTG00005004922 #26 ENSPCTG00005004898 #29 RPS23 (ENSPCTG00005004877) #30 ENSPCTG00005004844 ATG10 (ENSPCTG00005004830) #31 SSBP2 (ENSPCTG00005004708) #33 ACOT12 (ENSPCTG00005004589) #34 ZCCHC9 (ENSPCTG00005004543) #35 MiCK (ENSPCTG00005004510) #36 RASGRF2 (ENSPCTG00005004383) #37 MSH3 (ENSPCTG00005004305) Blue whale MODERN SPECIES 14 ENSBMSG00010001567 ENSBMSG00010001561 ADGRV1 (ENSBMSG00010001495) #10 LYSMD3 (ENSBMSG00010001422) #12 ENSBMSG00010001406 MBLAC2 (ENSBMSG00010001393) #14 ENSBMSG00010001381 CETN3 (ENSBMSG00010001364) #15 ENSBMSG00010001350 MEF2C (ENSBMSG00010000526) #16 TMEM161B (ENSBMSG00010000201) #17 ENSBMSG00010000148 CCNH (ENSBMSG00010000119) #18 RASA1 (ENSBMSG00010000084) #19 ENSBMSG00010000023 #20 EDIL3 (ENSBMSG00010007186) #22 ENSBMSG00010007170 HAPLN1 (ENSBMSG00010007160) #23 VCAN (ENSBMSG00010007115) #24 XRCC4 (ENSBMSG00010007092) #25 ENSBMSG00010007076 #26 RPS23 (ENSBMSG00010007033) #30 ATG10 (ENSBMSG00010007011) #31 SSBP2 (ENSBMSG00010006966) #33 ACOT12 (ENSBMSG00010006914) #34 ENSBMSG00010006899 #35 CKMT2 (ENSBMSG00010006888) #36 RASGRF2 (ENSBMSG00010006843) #37 MSH3 (ENSBMSG00010006814) ENSBMSG00010006789 ANKRD34B (ENSBMSG00010006782) Pecora ANCESTRAL SPECIES ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.h.a.b.a.a #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 ENSGT00390000010283 Percora_a ANCESTRAL SPECIES ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.h.a.b.a.a.a #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 ENSGT00390000010283.i Bovidae ANCESTRAL SPECIES ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00960000192799 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.h.a.b.a.a.a #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 ENSGT00390000010283.i Bovinae ANCESTRAL SPECIES 2 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00390000013276.o.b ENSGT00940000157492.b #16 ENSGT00960000192799 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00940000153147.m.a.a.a.a.a ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000011776.i.b.a ENSGT00390000018086.z.h.a.b.a.a.a.c #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t.c.a #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 ENSGT00390000010283.i Bos ANCESTRAL SPECIES 3 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00390000013276.o.b ENSGT00940000157492.b #16 ENSGT00960000192799 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00940000153147.m.a.a.a.a.a ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000011776.i.b.a ENSGT00390000018086.z.h.a.b.a.a.a.c #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t.c.a #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 ENSGT00390000010283.i Bos_a ANCESTRAL SPECIES 2 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00390000013276.o.b ENSGT00940000157492.b #16 ENSGT00960000192799 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00940000153147.m.a.a.a.a.a ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000011776.i.b.a ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t.c.a #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 ENSGT00390000010283.i Wild yak MODERN SPECIES 1555 ENSBMUG00000007634 EDIL3 (ENSBMUG00000007651) #22 ENSBMUG00000007659 HAPLN1 (ENSBMUG00000007663) #23 VCAN (ENSBMUG00000007694) #24 XRCC4 (ENSBMUG00000007761) #25 ENSBMUG00000007771 ENSBMUG00000007780 #26 ENSBMUG00000007795 #29 RPS23 (ENSBMUG00000007812) #30 ATG10 (ENSBMUG00000007821) #31 Domestic yak MODERN SPECIES 27 ADGRV1 (ENSBGRG00000005790) #10 LYSMD3 (ENSBGRG00000005743) #12 ENSBGRG00000005682 MBLAC2 (ENSBGRG00000005658) #14 CETN3 (ENSBGRG00000005546) #15 ENSBGRG00000005517 ENSBGRG00000005495 MEF2C (ENSBGRG00000003562) #16 TMEM161B (ENSBGRG00000003465) #17 ENSBGRG00000003441 CCNH (ENSBGRG00000003393) #18 RASA1 (ENSBGRG00000003000) #19 ENSBGRG00000002911 ENSBGRG00000002891 #20 ENSBGRG00000002876 EDIL3 (ENSBGRG00000002823) #22 HAPLN1 (ENSBGRG00000002793) #23 ENSBGRG00000002717 #24 XRCC4 (ENSBGRG00000002672) #25 ENSBGRG00000002643 #26 ENSBGRG00000002629 #29 RPS23 (ENSBGRG00000002552) #30 ENSBGRG00000002531 ATG10 (ENSBGRG00000002509) #31 ENSBGRG00000002331 #33 ACOT12 (ENSBGRG00000002226) #34 ZCCHC9 (ENSBGRG00000002188) #35 CKMT2 (ENSBGRG00000002164) #36 RASGRF2 (ENSBGRG00000002055) #37 MSH3 (ENSBGRG00000001953) ENSBGRG00000001927 Bos_b ANCESTRAL SPECIES 2 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00390000013276.o.b ENSGT00940000157492.b #16 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00940000153147.m.a.a.a.a.a ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000011776.i.b.a ENSGT00390000018086.z.h.a.b.a.a.a.c #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.t.c.a #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.i ENSGT00390000012355.A.a Cow MODERN SPECIES 26 POLR3G (ENSBTAG00000044077) MBLAC2 (ENSBTAG00000013612) #14 ENSBTAG00000049440 CETN3 (ENSBTAG00000014373) #15 ENSBTAG00000050847 ENSBTAG00000003258 MEF2C (ENSBTAG00000020701) #16 ENSBTAG00000050008 TMEM161B (ENSBTAG00000008484) #17 ENSBTAG00000022762 CCNH (ENSBTAG00000009566) #18 ENSBTAG00000039523 RASA1 (ENSBTAG00000009565) #19 ENSBTAG00000037434 ENSBTAG00000039555 #20 EDIL3 (ENSBTAG00000044033) #22 HAPLN1 (ENSBTAG00000012411) #23 VCAN (ENSBTAG00000014906) #24 XRCC4 (ENSBTAG00000024275) #25 TMEM167A (ENSBTAG00000039591) #26 ATP6AP1L (ENSBTAG00000050733) #29 RPS23 (ENSBTAG00000013358) #30 ATG10 (ENSBTAG00000038117) #31 SSBP2 (ENSBTAG00000013856) #33 ACOT12 (ENSBTAG00000011110) #34 ZCCHC9 (ENSBTAG00000005265) #35 CKMT2 (ENSBTAG00000001003) #36 RASGRF2 (ENSBTAG00000030259) #37 MSH3 (ENSBTAG00000007684) DHFR (ENSBTAG00000007681) ANKRD34B (ENSBTAG00000007633) Hybrid Bos Indicus MODERN SPECIES 26 LYSMD3 (ENSBIXG00005031273) #12 ENSBIXG00005031282 MBLAC2 (ENSBIXG00005031285) #14 CETN3 (ENSBIXG00005001585) #15 ENSBIXG00005001676 MEF2C (ENSBIXG00005005207) #16 TMEM161B (ENSBIXG00005028965) #17 ENSBIXG00005005066 CCNH (ENSBIXG00005028904) #18 RASA1 (ENSBIXG00005028839) #19 ENSBIXG00005006645 ENSBIXG00005002359 ENSBIXG00005002395 #20 ENSBIXG00005004944 ENSBIXG00005004939 EDIL3 (ENSBIXG00005028476) #22 HAPLN1 (ENSBIXG00005028378) #23 VCAN (ENSBIXG00005028318) #24 XRCC4 (ENSBIXG00005006967) #25 ENSBIXG00005028035 #26 ENSBIXG00005007595 #29 RPS23 (ENSBIXG00005027957) #30 ATG10 (ENSBIXG00005027902) #31 SSBP2 (ENSBIXG00005027806) #33 ACOT12 (ENSBIXG00005027646) #34 ZCCHC9 (ENSBIXG00005027597) #35 CKMT2 (ENSBIXG00005027530) #36 RASGRF2 (ENSBIXG00005027490) #37 MSH3 (ENSBIXG00005027416) ENSBIXG00005027356 ANKRD34B (ENSBIXG00005004705) American bison MODERN SPECIES 3347 ENSBBBG00000003562 EDIL3 (ENSBBBG00000014711) #22 HAPLN1 (ENSBBBG00000014722) #23 VCAN (ENSBBBG00000014864) #24 XRCC4 (ENSBBBG00000008154) #25 ENSBBBG00000014913 #26 ENSBBBG00000001222 #29 RPS23 (ENSBBBG00000001192) #30 ATG10 (ENSBBBG00000001167) #31 SSBP2 (ENSBBBG00000000825) #33 ACOT12 (ENSBBBG00000003637) #34 ZCCHC9 (ENSBBBG00000003607) #35 CKMT2 (ENSBBBG00000000814) #36 RASGRF2 (ENSBBBG00000014983) #37 MSH3 (ENSBBBG00000002773) ENSBBBG00000003536 ANKRD34B (ENSBBBG00000015166) Caprinae ANCESTRAL SPECIES 3 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253.a ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00960000192799 ENSGT00910000147866 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.h.a.b.a.a.a.b #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed.g #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.i ENSGT00390000012355.A.a ENSGT00530000063681.b.a Goat MODERN SPECIES 26 ARRDC3 (ENSCHIG00000026437) #9 ADGRV1 (ENSCHIG00000025783) #10 LYSMD3 (ENSCHIG00000003504) #12 ENSCHIG00000018071 MBLAC2 (ENSCHIG00000023453) #14 CETN3 (ENSCHIG00000016019) #15 ENSCHIG00000020592 MEF2C (ENSCHIG00000016206) #16 TMEM161B (ENSCHIG00000026629) #17 ENSCHIG00000009148 ENSCHIG00000011671 CCNH (ENSCHIG00000023767) #18 RASA1 (ENSCHIG00000014118) #19 ENSCHIG00000026992 #20 ENSCHIG00000018614 EDIL3 (ENSCHIG00000020190) #22 HAPLN1 (ENSCHIG00000023635) #23 VCAN (ENSCHIG00000026117) #24 XRCC4 (ENSCHIG00000015879) #25 ENSCHIG00000010267 ENSCHIG00000012625 #26 ENSCHIG00000026375 #29 RPS23 (ENSCHIG00000014944) #30 ATG10 (ENSCHIG00000023237) #31 ENSCHIG00000013647 ENSCHIG00000020381 #33 ACOT12 (ENSCHIG00000018595) #34 ZCCHC9 (ENSCHIG00000024514) #35 CKMT2 (ENSCHIG00000018578) #36 RASGRF2 (ENSCHIG00000027194) #37 MSH3 (ENSCHIG00000026585) Rambouillet Sheep MODERN SPECIES 21 ARRDC3 (ENSOARG00020023796) #9 ENSOARG00020023738 #10 ENSOARG00020023494 #10 LYSMD3 (ENSOARG00020023468) #12 POLR3G (ENSOARG00020023448) MBLAC2 (ENSOARG00020023430) #14 CETN3 (ENSOARG00020023394) #15 MEF2C (ENSOARG00020023218) #16 ENSOARG00020023187 ENSOARG00020023175 TMEM161B (ENSOARG00020022987) #17 CCNH (ENSOARG00020022925) #18 RASA1 (ENSOARG00020021922) #19 ENSOARG00020021822 #20 ENSOARG00020021797 EDIL3 (ENSOARG00020021700) #22 HAPLN1 (ENSOARG00020021646) #23 VCAN (ENSOARG00020021234) #24 XRCC4 (ENSOARG00020021156) #25 ENSOARG00020021132 TMEM167A (ENSOARG00020021065) #26 RPS23 (ENSOARG00020020958) #30 ENSOARG00020020926 ATG10 (ENSOARG00020020709) #31 SSBP2 (ENSOARG00020017360) #33 ACOT12 (ENSOARG00020017094) #34 ENSOARG00020017025 #35 CKMT2 (ENSOARG00020016978) #36 RASGRF2 (ENSOARG00020016662) #37 MSH3 (ENSOARG00020016326) DHFR (ENSOARG00020016220) Siberian musk deer MODERN SPECIES 64 MEF2C (ENSMMSG00000010714) #16 ENSMMSG00000010663 TMEM161B (ENSMMSG00000010530) #17 CCNH (ENSMMSG00000010425) #18 RASA1 (ENSMMSG00000009941) #19 ENSMMSG00000009859 #20 ENSMMSG00000009810 EDIL3 (ENSMMSG00000009709) #22 HAPLN1 (ENSMMSG00000009670) #23 VCAN (ENSMMSG00000009492) #24 XRCC4 (ENSMMSG00000009442) #25 TMEM167A (ENSMMSG00000009408) #26 ENSMMSG00000009376 #29 RPS23 (ENSMMSG00000009338) #30 ATG10 (ENSMMSG00000009261) #31 ENSMMSG00000009140 #33 ACOT12 (ENSMMSG00000008994) #34 ZCCHC9 (ENSMMSG00000008961) #35 CKMT2 (ENSMMSG00000008923) #36 RASGRF2 (ENSMMSG00000008773) #37 MSH3 (ENSMMSG00000008280) ENSMMSG00000008196 ANKRD34B (ENSMMSG00000008176) Yarkand deer MODERN SPECIES 32 FAM172A (ENSCHYG00000004013) ARRDC3 (ENSCHYG00000003906) #9 ADGRV1 (ENSCHYG00000003763) #10 LYSMD3 (ENSCHYG00000003721) #12 ENSCHYG00000003644 MBLAC2 (ENSCHYG00000003631) #14 CETN3 (ENSCHYG00000003610) #15 ENSCHYG00000003593 ENSCHYG00000003578 MEF2C (ENSCHYG00000003492) #16 ENSCHYG00000003464 TMEM161B (ENSCHYG00000003346) #17 CCNH (ENSCHYG00000003238) #18 RASA1 (ENSCHYG00000003079) #19 ENSCHYG00000003033 #20 EDIL3 (ENSCHYG00000002937) #22 HAPLN1 (ENSCHYG00000002889) #23 VCAN (ENSCHYG00000002720) #24 XRCC4 (ENSCHYG00000002672) #25 ENSCHYG00000002651 #26 ENSCHYG00000002635 ENSCHYG00000002627 #29 RPS23 (ENSCHYG00000002604) #30 ATG10 (ENSCHYG00000002572) #31 ENSCHYG00000002550 ENSCHYG00000002539 SSBP2 (ENSCHYG00000002111) #33 ACOT12 (ENSCHYG00000001923) #34 ZCCHC9 (ENSCHYG00000001898) #35 CKMT2 (ENSCHYG00000001872) #36 RASGRF2 (ENSCHYG00000001777) #37 Camelidae ANCESTRAL SPECIES 1 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a.ed #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Arabian camel MODERN SPECIES 22 FAM172A (ENSCDRG00005013822) POU5F2 (ENSCDRG00005013944) NR2F1 (ENSCDRG00005014004) ENSCDRG00005014036 ARRDC3 (ENSCDRG00005014088) #9 ADGRV1 (ENSCDRG00005014220) #10 LYSMD3 (ENSCDRG00005014481) #12 ENSCDRG00005014536 MBLAC2 (ENSCDRG00005014578) #14 CETN3 (ENSCDRG00005014609) #15 MEF2C (ENSCDRG00005014686) #16 TMEM161B (ENSCDRG00005015359) #17 CCNH (ENSCDRG00005015934) #18 RASA1 (ENSCDRG00005016008) #19 ENSCDRG00005016325 #20 EDIL3 (ENSCDRG00005016390) #22 ENSCDRG00005016462 HAPLN1 (ENSCDRG00005016491) #23 VCAN (ENSCDRG00005016571) #24 XRCC4 (ENSCDRG00005016772) #25 TMEM167A (ENSCDRG00005016802) #26 ENSCDRG00005016847 #29 RPS23 (ENSCDRG00005016870) ##30 ATG10 (ENSCDRG00005016936) #31 SSBP2 (ENSCDRG00005017010) #33 ACOT12 (ENSCDRG00005017206) #34 ZCCHC9 (ENSCDRG00005017268) #35 CKMT2 (ENSCDRG00005017343) #36 RASGRF2 (ENSCDRG00005017402) #37 MSH3 (ENSCDRG00005017666) ENSCDRG00005018379 Alpaca MODERN SPECIES 2100 EDIL3 (ENSVPAG00000001371) #22 HAPLN1 (ENSVPAG00000001370) #23 VCAN (ENSVPAG00000001368) #24 XRCC4 (ENSVPAG00000001366) #25 TMEM167A (ENSVPAG00000001365) #26 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k #20 ENSGT00990000209137 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT01030000234916 ENSGT00550000074784.a.b ##30 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 Carnivora ANCESTRAL SPECIES 8 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00940000153064.b.d ENSGT00950000183016.E.b.b.b ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k #20 ENSGT00990000209137 ENSGT00390000018086.z.j.b #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.b #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Caniformia ANCESTRAL SPECIES 5 ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.a #17 ENSGT00390000000672.a.b.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.j.b.a.a #20 ENSGT00390000018086.z.j.b.a.b #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.a #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Caniformia_b ANCESTRAL SPECIES 4 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.a #17 ENSGT00390000000672.a.b.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.j.b.a.b #20 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.a #26 ENSGT00940000155186.q.b #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A.b #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 Ursidae ANCESTRAL SPECIES 16 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.rb #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.a #17 ENSGT00390000000672.a.b.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.j.b.a.b #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.a #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A.b #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Ursus ANCESTRAL SPECIES 298 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.a #26 Polar bear MODERN SPECIES 289 EDIL3 (ENSUMAG00000000738) #22 HAPLN1 (ENSUMAG00000000692) #23 VCAN (ENSUMAG00000000664) #24 XRCC4 (ENSUMAG00000000649) #25 TMEM167A (ENSUMAG00000000641) #26 American black bear MODERN SPECIES 4017 EDIL3 (ENSUAMG00000021162) #22 Giant Panda MODERN SPECIES 13 FAM172A (ENSAMEG00000006805) NR2F1 (ENSAMEG00000003437) ARRDC3 (ENSAMEG00000010468) #9 ENSAMEG00000027330 ADGRV1 (ENSAMEG00000013179) #10 ENSAMEG00000028431 LYSMD3 (ENSAMEG00000013235) #12 MBLAC2 (ENSAMEG00000026891) #14 ENSAMEG00000013240 CETN3 (ENSAMEG00000013258) #15 MEF2C (ENSAMEG00000013271) #16 TMEM161B (ENSAMEG00000013309) #17 CCNH (ENSAMEG00000013328) #18 RASA1 (ENSAMEG00000013362) #19 COX7C (ENSAMEG00000013441) #20 EDIL3 (ENSAMEG00000004721) #22 HAPLN1 (ENSAMEG00000007517) #23 VCAN (ENSAMEG00000007464) #24 XRCC4 (ENSAMEG00000007459) #25 TMEM167A (ENSAMEG00000023466) #26 ENSAMEG00000027104 #29 RPS23 (ENSAMEG00000015966) #30 ENSAMEG00000028746 ATG10 (ENSAMEG00000015949) #31 SSBP2 (ENSAMEG00000015913) #33 ACOT12 (ENSAMEG00000015867) #34 CKMT2 (ENSAMEG00000015838) #36 ENSAMEG00000028748 RASGRF2 (ENSAMEG00000015782) #37 MSH3 (ENSAMEG00000015754) ENSAMEG00000015750 Mustelinae ANCESTRAL SPECIES 38 ENSGT00530000063907.c ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000165378 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000264971 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00990000209137 ENSGT00940000158144 #22 ENSGT01010000224334 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.b #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A.b #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000170977 American mink MODERN SPECIES 303 ENSNVIG00000023054 ENSNVIG00000023057 EDIL3 (ENSNVIG00000023059) #22 ENSNVIG00000023066 HAPLN1 (ENSNVIG00000023067) #23 VCAN (ENSNVIG00000023075) #24 XRCC4 (ENSNVIG00000023103) #25 TMEM167A (ENSNVIG00000023109) #26 ENSNVIG00000023119 #29 Ferret MODERN SPECIES 231 ARRDC3 (ENSMPUG00000007709) #9 ADGRV1 (ENSMPUG00000007722) #10 LYSMD3 (ENSMPUG00000007898) #12 ENSMPUG00000007905 MBLAC2 (ENSMPUG00000007938) #14 CETN3 (ENSMPUG00000007940) #15 ENSMPUG00000019825 MEF2C (ENSMPUG00000007964) #16 ENSMPUG00000019826 TMEM161B (ENSMPUG00000007974) #17 CCNH (ENSMPUG00000007985) #18 RASA1 (ENSMPUG00000007995) #19 ENSMPUG00000008011 EDIL3 (ENSMPUG00000008054) #22 ENSMPUG00000008068 HAPLN1 (ENSMPUG00000008073) #23 VCAN (ENSMPUG00000008080) #24 XRCC4 (ENSMPUG00000008093) #25 ENSMPUG00000008101 #29 RPS23 (ENSMPUG00000008114) #30 ATG10 (ENSMPUG00000008122) #31 ENSMPUG00000008145 #33 ACOT12 (ENSMPUG00000008154) #34 ZCCHC9 (ENSMPUG00000008276) #35 CKMT2 (ENSMPUG00000008281) #36 RASGRF2 (ENSMPUG00000008451) #37 ENSMPUG00000008654 MSH3 (ENSMPUG00000008661) ENSMPUG00000008702 Canidae ANCESTRAL SPECIES 52 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129.a ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.a #17 ENSGT00390000000672.a.b.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.j.b.a.a #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.a #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Canis_lupus ANCESTRAL SPECIES 9 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129.a ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b.a #17 ENSGT00390000000672.a.b.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.j.b.a.a #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.a #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00950000182901.a.a.b.b.a.b.a.b.b.b ENSGT00940000155679 #37 ENSGT00550000074949 Dingo MODERN SPECIES 138 MBLAC2 (ENSCAFG00020005995) #14 CETN3 (ENSCAFG00020005994) #15 MEF2C (ENSCAFG00020005345) #16 ENSCAFG00020005193 #17 ENSCAFG00020005076 #17 ENSCAFG00020005035 ENSCAFG00020005033 CCNH (ENSCAFG00020004794) #18 RASA1 (ENSCAFG00020003475) #19 ENSCAFG00020003332 #20 ENSCAFG00020003329 ENSCAFG00020003311 ENSCAFG00020003308 ENSCAFG00020003294 ENSCAFG00020003272 EDIL3 (ENSCAFG00020003249) #22 HAPLN1 (ENSCAFG00020003233) #23 ENSCAFG00020003203 #24 ENSCAFG00020003191 XRCC4 (ENSCAFG00020003038) #25 ENSCAFG00020003023 ENSCAFG00020003017 #29 ENSCAFG00020003016 ENSCAFG00020002993 ##30 ATG10 (ENSCAFG00020002977) #31 SSBP2 (ENSCAFG00020002937) #33 ACOT12 (ENSCAFG00020002922) #34 ZCCHC9 (ENSCAFG00020002911) #35 CKMT2 (ENSCAFG00020002898) #36 ENSCAFG00020002891 RASGRF2 (ENSCAFG00020001341) #37 Dog MODERN SPECIES 22 FAM172A (ENSCAFG00845015282) NR2F1 (ENSCAFG00845015564) ARRDC3 (ENSCAFG00845015988) #9 ADGRV1 (ENSCAFG00845016226) #10 LYSMD3 (ENSCAFG00845016559) #12 POLR3G (ENSCAFG00845016615) MBLAC2 (ENSCAFG00845016669) #14 CETN3 (ENSCAFG00845016793) #15 MEF2C (ENSCAFG00845017289) #16 TMEM161B (ENSCAFG00845018131) #17 CCNH (ENSCAFG00845018630) #18 RASA1 (ENSCAFG00845018838) #19 ENSCAFG00845019491 #20 ENSCAFG00845019654 ENSCAFG00845019702 EDIL3 (ENSCAFG00845019823) #22 HAPLN1 (ENSCAFG00845019962) #23 VCAN (ENSCAFG00845020098) #24 XRCC4 (ENSCAFG00845020506) #25 TMEM167A (ENSCAFG00845020637) #26 ENSCAFG00845020741 #29 RPS23 (ENSCAFG00845020943) ##30 ENSCAFG00845021041 ENSCAFG00845021100 #31 SSBP2 (ENSCAFG00845021264) #33 ACOT12 (ENSCAFG00845021525) #34 ZCCHC9 (ENSCAFG00845021627) #35 CKMT2 (ENSCAFG00845021668) #36 RASGRF2 (ENSCAFG00845021795) #37 ENSCAFG00845022211 MSH3 (ENSCAFG00845022317) Red fox MODERN SPECIES 11 NR2F1 (ENSVVUG00000022129) ENSVVUG00000022154 ENSVVUG00000022156 ARRDC3 (ENSVVUG00000022162) #9 ADGRV1 (ENSVVUG00000022179) #10 LYSMD3 (ENSVVUG00000022480) #12 POLR3G (ENSVVUG00000022482) MBLAC2 (ENSVVUG00000022485) #14 CETN3 (ENSVVUG00000022496) #15 MEF2C (ENSVVUG00000022531) #16 TMEM161B (ENSVVUG00000022547) #17 CCNH (ENSVVUG00000022568) #18 RASA1 (ENSVVUG00000022666) #19 ENSVVUG00000023203 ENSVVUG00000023210 #20 EDIL3 (ENSVVUG00000023242) #22 HAPLN1 (ENSVVUG00000023246) #23 VCAN (ENSVVUG00000023253) #24 XRCC4 (ENSVVUG00000023262) #25 ENSVVUG00000023272 #26 ENSVVUG00000023284 #29 RPS23 (ENSVVUG00000023287) #30 ENSVVUG00000023289 ATG10 (ENSVVUG00000023291) #31 SSBP2 (ENSVVUG00000023314) #33 ACOT12 (ENSVVUG00000023325) #34 ZCCHC9 (ENSVVUG00000023331) #35 SEPT11 (ENSVVUG00000023346) ENSVVUG00000023386 SHROOM3 (ENSVVUG00000023389) CCDC158 (ENSVVUG00000023403) Felidae ANCESTRAL SPECIES 6 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00940000153064.b.d.f.b.a ENSGT00950000183016.E.b.b.b.o ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k.f #20 ENSGT00990000209137 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.b #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Panthera ANCESTRAL SPECIES 6 ENSGT00940000164293 ENSGT00940000157876 ENSGT00910000147795 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k.f #20 ENSGT00990000209137 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.b #26 ENSGT01000000215143 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00950000184259 Panthera_a ANCESTRAL SPECIES 3 ENSGT00940000164293 ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00940000164415 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k.f #20 ENSGT00990000209137 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.q.b #26 ENSGT01000000215143 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01100000263873 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00950000184259 lion MODERN SPECIES ENSPLOG00000011209 ARRDC3 (ENSPLOG00000011242) #9 ADGRV1 (ENSPLOG00000011381) #10 LYSMD3 (ENSPLOG00000012246) #12 ENSPLOG00000012266 MBLAC2 (ENSPLOG00000012299) #14 ENSPLOG00000012328 CETN3 (ENSPLOG00000012412) #15 MEF2C (ENSPLOG00000012545) #16 ENSPLOG00000012737 TMEM161B (ENSPLOG00000012789) #17 CCNH (ENSPLOG00000012933) #18 RASA1 (ENSPLOG00000013077) #19 COX7C (ENSPLOG00000013360) #20 ENSPLOG00000013409 EDIL3 (ENSPLOG00000013439) #22 HAPLN1 (ENSPLOG00000013633) #23 VCAN (ENSPLOG00000013768) #24 ENSPLOG00000013906 XRCC4 (ENSPLOG00000013925) #25 ENSPLOG00000013980 #26 ENSPLOG00000014059 #29 ENSPLOG00000014144 #30 ATG10 (ENSPLOG00000014220) #31 SSBP2 (ENSPLOG00000000026) #33 ACOT12 (ENSPLOG00000000044) #34 ZCCHC9 (ENSPLOG00000000050) #35 CKMT2 (ENSPLOG00000000058) #36 RASGRF2 (ENSPLOG00000000068) #37 MSH3 (ENSPLOG00000000131) ENSPLOG00000000207 leopard MODERN SPECIES 40 ARRDC3 (ENSPPRG00000024372) #9 ADGRV1 (ENSPPRG00000019300) #10 LYSMD3 (ENSPPRG00000006547) #12 ENSPPRG00000006320 MBLAC2 (ENSPPRG00000006169) #14 CETN3 (ENSPPRG00000005808) #15 MEF2C (ENSPPRG00000004433) #16 ENSPPRG00000025023 TMEM161B (ENSPPRG00000025054) #17 CCNH (ENSPPRG00000019964) #18 RASA1 (ENSPPRG00000018762) #19 COX7C (ENSPPRG00000013235) #20 ENSPPRG00000013140 EDIL3 (ENSPPRG00000012668) #22 HAPLN1 (ENSPPRG00000011520) #23 ENSPPRG00000010678 #24 XRCC4 (ENSPPRG00000008800) #25 ENSPPRG00000008129 #26 ENSPPRG00000007337 ENSPPRG00000007261 #29 RPS23 (ENSPPRG00000006877) #30 ENSPPRG00000005949 ATG10 (ENSPPRG00000005547) #31 SSBP2 (ENSPPRG00000004684) #33 ACOT12 (ENSPPRG00000022908) #34 ZCCHC9 (ENSPPRG00000023474) #35 CKMT2 (ENSPPRG00000023587) #36 RASGRF2 (ENSPPRG00000024375) #37 ENSPPRG00000019187 Tiger MODERN SPECIES 134 ARRDC3 (ENSPTIG00000017076) #9 ENSPTIG00000017493 #10 ENSPTIG00000020703 #10 LYSMD3 (ENSPTIG00000018455) #12 ENSPTIG00000018989 MBLAC2 (ENSPTIG00000019976) #14 CETN3 (ENSPTIG00000020886) #15 MEF2C (ENSPTIG00000021723) #16 TMEM161B (ENSPTIG00000016989) #17 CCNH (ENSPTIG00000019590) #18 RASA1 (ENSPTIG00000001406) #19 COX7C (ENSPTIG00000012097) #20 EDIL3 (ENSPTIG00000013147) #22 HAPLN1 (ENSPTIG00000015518) #23 ENSPTIG00000015827 #24 XRCC4 (ENSPTIG00000018886) #25 TMEM167A (ENSPTIG00000020380) #26 ENSPTIG00000020576 ENSPTIG00000020744 #29 RPS23 (ENSPTIG00000021170) #30 ENSPTIG00000006771 ATG10 (ENSPTIG00000007429) #31 SSBP2 (ENSPTIG00000010302) #33 ACOT12 (ENSPTIG00000016875) #34 ZCCHC9 (ENSPTIG00000017303) #35 CKMT2 (ENSPTIG00000018190) #36 RASGRF2 (ENSPTIG00000021051) #37 ENSPTIG00000021977 Cat MODERN SPECIES ADGRV1 (ENSFCAG00000012405) #10 LYSMD3 (ENSFCAG00000029406) #12 ENSFCAG00000032444 MBLAC2 (ENSFCAG00000029005) #14 ENSFCAG00000024204 CETN3 (ENSFCAG00000022808) #15 MEF2C (ENSFCAG00000011595) #16 TMEM161B (ENSFCAG00000031564) #17 ENSFCAG00000050982 ENSFCAG00000048547 CCNH (ENSFCAG00000004828) #18 RASA1 (ENSFCAG00000004825) #19 COX7C (ENSFCAG00000034705) #20 ENSFCAG00000022528 ENSFCAG00000050071 EDIL3 (ENSFCAG00000002497) #22 HAPLN1 (ENSFCAG00000037432) #23 VCAN (ENSFCAG00000023191) #24 XRCC4 (ENSFCAG00000029944) #25 ENSFCAG00000045423 #26 ENSFCAG00000046011 #29 RPS23 (ENSFCAG00000008839) #30 ENSFCAG00000022315 ATG10 (ENSFCAG00000036397) #31 SSBP2 (ENSFCAG00000011841) #33 ACOT12 (ENSFCAG00000009827) #34 ZCCHC9 (ENSFCAG00000033419) #35 CKMT2 (ENSFCAG00000004820) #36 RASGRF2 (ENSFCAG00000022975) #37 MSH3 (ENSFCAG00000005686) ENSFCAG00000026745 Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00940000164293 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k #20 ENSGT00990000209137 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.p #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Chiroptera ANCESTRAL SPECIES 1 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k #20 ENSGT00990000209137 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.p #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Microchiroptera ANCESTRAL SPECIES 3 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k #20 ENSGT00990000209137 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.p #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Greater horseshoe bat MODERN SPECIES 25 FAM172A (ENSRFEG00010021303) NR2F1 (ENSRFEG00010021267) ARRDC3 (ENSRFEG00010021249) #9 ENSRFEG00010021237 ADGRV1 (ENSRFEG00010021104) #10 LYSMD3 (ENSRFEG00010021070) #12 ENSRFEG00010021057 MBLAC2 (ENSRFEG00010021048) #14 CETN3 (ENSRFEG00010021029) #15 MEF2C (ENSRFEG00010020935) #16 TMEM161B (ENSRFEG00010020897) #17 CCNH (ENSRFEG00010020861) #18 RASA1 (ENSRFEG00010020705) #19 ENSRFEG00010020642 #20 ENSRFEG00010020631 EDIL3 (ENSRFEG00010020588) #22 HAPLN1 (ENSRFEG00010020554) #23 VCAN (ENSRFEG00010020306) #24 XRCC4 (ENSRFEG00010020264) #25 ENSRFEG00010020237 #26 ENSRFEG00010020195 #29 RPS23 (ENSRFEG00010020074) #30 ATG10 (ENSRFEG00010020034) #31 ENSRFEG00010019999 SSBP2 (ENSRFEG00010019877) #33 ZCCHC9 (ENSRFEG00010019818) #35 ACOT12 (ENSRFEG00010019759) #34 CKMT2 (ENSRFEG00010019715) #36 RASGRF2 (ENSRFEG00010019626) #37 ENSRFEG00010019598 MSH3 (ENSRFEG00010019541) Microbat MODERN SPECIES 937 ENSMLUG00000025001 ADGRV1 (ENSMLUG00000000281) #10 LYSMD3 (ENSMLUG00000030107) #12 ENSMLUG00000014954 #13 MBLAC2 (ENSMLUG00000014952) #14 CETN3 (ENSMLUG00000029475) #15 MEF2C (ENSMLUG00000008230) #16 TMEM161B (ENSMLUG00000008633) #17 CCNH (ENSMLUG00000011533) #18 RASA1 (ENSMLUG00000011486) #19 ENSMLUG00000025365 ENSMLUG00000030456 COX7C (ENSMLUG00000026041) #20 ENSMLUG00000024030 ENSMLUG00000023755 EDIL3 (ENSMLUG00000011587) #22 HAPLN1 (ENSMLUG00000001603) #23 VCAN (ENSMLUG00000013757) #24 XRCC4 (ENSMLUG00000013754) #25 TMEM167A (ENSMLUG00000008924) #26 ENSMLUG00000013943 #29 ENSMLUG00000013939 ##30 ATG10 (ENSMLUG00000013935) #31 SSBP2 (ENSMLUG00000001897) #33 ACOT12 (ENSMLUG00000001890) #34 ZCCHC9 (ENSMLUG00000001886) #35 CKMT2 (ENSMLUG00000001884) #36 RASGRF2 (ENSMLUG00000001877) #37 MSH3 (ENSMLUG00000001865) ENSMLUG00000012200 ANKRD34B (ENSMLUG00000002857) Megabat MODERN SPECIES 1149 EDIL3 (ENSPVAG00000002658) #22 HAPLN1 (ENSPVAG00000002655) #23 Equus ANCESTRAL SPECIES 6 ENSGT00610000086112 ENSGT00940000164293 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260253 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086.z.k #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186.p #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.b ##30 ENSGT01100000266343 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Donkey MODERN SPECIES 29 ARHGEF37 (ENSEASG00005002843) CSNK1A1 (ENSEASG00005002855) IL17B (ENSEASG00005034663) PCYOX1L (ENSEASG00005002869) GRPEL2 (ENSEASG00005029186) AFAP1L1 (ENSEASG00005002876) ABLIM3 (ENSEASG00005002886) SH3TC2 (ENSEASG00005002925) ADRB2 (ENSEASG00005035523) HTR4 (ENSEASG00005002941) FBXO38 (ENSEASG00005002952) SPINK9 (ENSEASG00005026461) SPINK7 (ENSEASG00005031369) ENSEASG00005027718 ENSEASG00005024880 ENSEASG00005004576 #22 HAPLN1 (ENSEASG00005004559) #23 VCAN (ENSEASG00005004200) #24 XRCC4 (ENSEASG00005004152) #25 TMEM167A (ENSEASG00005035583) #26 ENSEASG00005004142 #29 RPS23 (ENSEASG00005004140) ##30 ENSEASG00005004133 ATG10 (ENSEASG00005004128) #31 ENSEASG00005032025 ##33 SSBP2 (ENSEASG00005004112) #33 ENSEASG00005032079 #34 ZCCHC9 (ENSEASG00005004088) #35 CKMT2 (ENSEASG00005004085) #36 RASGRF2 (ENSEASG00005002852) #37 MSH3 (ENSEASG00005002611) Horse MODERN SPECIES 5 KIAA0825 (ENSECAG00000018095) FAM172A (ENSECAG00000018274) NR2F1 (ENSECAG00000018508) ARRDC3 (ENSECAG00000019506) #9 ADGRV1 (ENSECAG00000021057) #10 LYSMD3 (ENSECAG00000024495) #12 POLR3G (ENSECAG00000024548) MBLAC2 (ENSECAG00000024647) #14 CETN3 (ENSECAG00000024704) #15 MEF2C (ENSECAG00000024716) #16 ENSECAG00000049214 TMEM161B (ENSECAG00000025094) #17 RASA1 (ENSECAG00000005203) #19 CCNH (ENSECAG00000001853) #18 ENSECAG00000030211 #20 EDIL3 (ENSECAG00000015388) #22 HAPLN1 (ENSECAG00000016477) #23 VCAN (ENSECAG00000019596) #24 XRCC4 (ENSECAG00000020269) #25 TMEM167A (ENSECAG00000026834) #26 ATP6AP1L (ENSECAG00000020318) #29 RPS23 (ENSECAG00000031968) ##30 ENSECAG00000035044 ATG10 (ENSECAG00000026970) #31 SSBP2 (ENSECAG00000020782) #33 ACOT12 (ENSECAG00000021196) #34 ZCCHC9 (ENSECAG00000023186) #35 CKMT2 (ENSECAG00000024226) #36 RASGRF2 (ENSECAG00000000903) #37 MSH3 (ENSECAG00000009962) ENSECAG00000026827 Atlantogenata ANCESTRAL SPECIES ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Afrotheria ANCESTRAL SPECIES 12 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a ENSGT00530000063681.b.a Tenrec MODERN SPECIES 5604 EDIL3 (ENSETEG00000013089) #22 Afrotheria_a ANCESTRAL SPECIES 12 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a ENSGT00530000063681.b.a Elephant MODERN SPECIES 526 MEF2C (ENSLAFG00000013761) #16 TMEM161B (ENSLAFG00000011097) #17 CCNH (ENSLAFG00000028032) #18 RASA1 (ENSLAFG00000011060) #19 COX7C (ENSLAFG00000017502) #20 EDIL3 (ENSLAFG00000017730) #22 HAPLN1 (ENSLAFG00000010769) #23 VCAN (ENSLAFG00000002716) #24 ENSLAFG00000011855 TMEM167A (ENSLAFG00000009206) #26 ENSLAFG00000013186 #29 RPS23 (ENSLAFG00000031506) ##30 ATG10 (ENSLAFG00000013183) #31 SSBP2 (ENSLAFG00000012776) #33 ACOT12 (ENSLAFG00000012765) #34 ZCCHC9 (ENSLAFG00000012763) #35 CKMT2 (ENSLAFG00000011587) #36 ENSLAFG00000028067 RASGRF2 (ENSLAFG00000011576) #37 ENSLAFG00000029236 ENSLAFG00000015797 Hyrax MODERN SPECIES 4731 EDIL3 (ENSPCAG00000002787) #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000158144 #22 Sloth MODERN SPECIES 5127 EDIL3 (ENSCHOG00000001449) #22 Armadillo MODERN SPECIES 3617 EDIL3 (ENSDNOG00000001497) #22 Marsupialia ANCESTRAL SPECIES 1 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00390000001347.t ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.a Opossum MODERN SPECIES 2 ADGRV1 (ENSMODG00000020196) #10 ENSMODG00000020220 #12 ENSMODG00000020218 ENSMODG00000020221 #14 CETN3 (ENSMODG00000020222) #15 ENSMODG00000042795 MEF2C (ENSMODG00000020223) #16 ENSMODG00000020225 TMEM161B (ENSMODG00000020226) #17 CCNH (ENSMODG00000020228) #18 RASA1 (ENSMODG00000020235) #19 COX7C (ENSMODG00000037063) #20 ENSMODG00000024868 ENSMODG00000041038 ENSMODG00000045346 EDIL3 (ENSMODG00000020246) #22 HAPLN1 (ENSMODG00000038203) #23 ENSMODG00000020252 #24 XRCC4 (ENSMODG00000020253) #25 ENSMODG00000040896 #26 ENSMODG00000037212 #29 RPS23 (ENSMODG00000020255) #30 ENSMODG00000024865 #31 ENSMODG00000044614 SSBP2 (ENSMODG00000020258) #33 ACOT12 (ENSMODG00000020260) #34 ZCCHC9 (ENSMODG00000020261) #35 CKMT2 (ENSMODG00000020259) #36 RASGRF2 (ENSMODG00000020263) #37 MSH3 (ENSMODG00000020264) ENSMODG00000024860 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00390000001347.t ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.a ENSGT00390000012355.A.a Diprotodontia ANCESTRAL SPECIES 1 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.kb #10 ENSGT00940000154880.jb #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00390000001347.t ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.a ENSGT00390000012355.A.a Diprotodontia_a ANCESTRAL SPECIES ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.kb #10 ENSGT00940000154880.jb #10 ENSGT00940000158711 #12 ENSGT01090000260129 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00390000001347.t ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283.a ENSGT00390000012355.A.a Common wonbat MODERN SPECIES 1013 ARRDC3 (ENSVURG00010017623) #9 ENSVURG00010017634 #10 ENSVURG00010017653 #10 LYSMD3 (ENSVURG00010017677) #12 ENSVURG00010017685 MBLAC2 (ENSVURG00010017691) #14 CETN3 (ENSVURG00010017696) #15 MEF2C (ENSVURG00010017717) #16 TMEM161B (ENSVURG00010017759) #17 CCNH (ENSVURG00010017770) #18 RASA1 (ENSVURG00010017779) #19 ENSVURG00010017797 #20 ENSVURG00010017806 ENSVURG00010017815 ENSVURG00010017826 EDIL3 (ENSVURG00010017835) #22 HAPLN1 (ENSVURG00010017842) #23 ENSVURG00010017848 #24 XRCC4 (ENSVURG00010017856) #25 ENSVURG00010017862 #26 ENSVURG00010017874 #30 ATG10 (ENSVURG00010017892) #31 ENSVURG00010017901 SSBP2 (ENSVURG00010017922) #33 ACOT12 (ENSVURG00010017946) #34 ZCCHC9 (ENSVURG00010017952) #35 CKMT2 (ENSVURG00010017961) #36 RASGRF2 (ENSVURG00010018013) #37 ENSVURG00010018314 ENSVURG00010018365 ANKRD34B (ENSVURG00010018370) koala MODERN SPECIES 5 ARRDC3 (ENSPCIG00000025721) #9 ENSPCIG00000000909 #10 ENSPCIG00000010004 #10 LYSMD3 (ENSPCIG00000004346) #12 ENSPCIG00000004353 MBLAC2 (ENSPCIG00000004357) #14 CETN3 (ENSPCIG00000004360) #15 MEF2C (ENSPCIG00000029504) #16 TMEM161B (ENSPCIG00000029514) #17 CCNH (ENSPCIG00000029526) #18 RASA1 (ENSPCIG00000029535) #19 ENSPCIG00000002439 #20 ENSPCIG00000003752 ENSPCIG00000002455 ENSPCIG00000036658 EDIL3 (ENSPCIG00000006442) #22 HAPLN1 (ENSPCIG00000007780) #23 ENSPCIG00000029893 #24 XRCC4 (ENSPCIG00000029896) #25 ENSPCIG00000032700 #26 ENSPCIG00000029898 ENSPCIG00000029899 ENSPCIG00000029901 #29 ENSPCIG00000029902 #30 RPS23 (ENSPCIG00000029904) #30 ENSPCIG00000029909 ATG10 (ENSPCIG00000029907) #31 SSBP2 (ENSPCIG00000013205) #33 ACOT12 (ENSPCIG00000013207) #34 ZCCHC9 (ENSPCIG00000013208) #35 CKMT2 (ENSPCIG00000013210) #36 Wallaby MODERN SPECIES 6973 ENSMEUG00000007893 #22 Tasmanian devil MODERN SPECIES ENSSHAG00000001791 ENSSHAG00000002123 ENSSHAG00000028977 #10 LYSMD3 (ENSSHAG00000030429) #12 ENSSHAG00000006647 ENSSHAG00000024161 #14 CETN3 (ENSSHAG00000026337) #15 ENSSHAG00000023543 MEF2C (ENSSHAG00000010347) #16 TMEM161B (ENSSHAG00000032244) #17 ENSSHAG00000030553 CCNH (ENSSHAG00000016764) #18 RASA1 (ENSSHAG00000016807) #19 COX7C (ENSSHAG00000026810) #20 ENSSHAG00000006286 EDIL3 (ENSSHAG00000005209) #22 HAPLN1 (ENSSHAG00000022951) #23 ENSSHAG00000007330 #24 XRCC4 (ENSSHAG00000009690) #25 TMEM167A (ENSSHAG00000029456) #26 ENSSHAG00000007765 #29 ENSSHAG00000030156 ENSSHAG00000008347 ##30 ENSSHAG00000028481 #30 ENSSHAG00000008505 #31 SSBP2 (ENSSHAG00000013397) #33 ACOT12 (ENSSHAG00000014213) #34 ZCCHC9 (ENSSHAG00000014504) #35 CKMT2 (ENSSHAG00000014606) #36 RASGRF2 (ENSSHAG00000014847) #37 MSH3 (ENSSHAG00000016015) Platypus MODERN SPECIES FAM172A (ENSOANG00000011068) NR2F1 (ENSOANG00000046139) ARRDC3 (ENSOANG00000011069) #9 ENSOANG00000043317 #10 ENSOANG00000011071 #10 LYSMD3 (ENSOANG00000011072) #12 ENSOANG00000046173 MBLAC2 (ENSOANG00000047148) #14 ENSOANG00000011075 #15 MEF2C (ENSOANG00000011076) #16 TMEM161B (ENSOANG00000011078) #17 CCNH (ENSOANG00000014752) #18 RASA1 (ENSOANG00000014753) #19 COX7C (ENSOANG00000014755) #20 ENSOANG00000048884 EDIL3 (ENSOANG00000014759) #22 HAPLN1 (ENSOANG00000014760) #23 ENSOANG00000014761 #24 ENSOANG00000014765 #25 TMEM167A (ENSOANG00000014766) #26 ENSOANG00000031637 #29 ATG10 (ENSOANG00000020641) #31 SSBP2 (ENSOANG00000014767) #33 ACOT12 (ENSOANG00000014768) #34 ZCCHC9 (ENSOANG00000014769) #35 CKMT2 (ENSOANG00000014771) #36 RASGRF2 (ENSOANG00000001603) #37 MSH3 (ENSOANG00000001605) ENSOANG00000001607 ANKRD34B (ENSOANG00000001609) FAM151B (ENSOANG00000001610) Sauria ANCESTRAL SPECIES 5 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT01080000257332.A ENSGT00390000000672.a.b #17 ENSGT00940000154136 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01040000241481 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT01040000240833 ENSGT00550000074784.a.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000154136 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01040000241481 ENSGT00550000074784.a.a #30 ENSGT01040000240833 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 Episquamata ANCESTRAL SPECIES 6 ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01040000241481 ENSGT00550000074784.a.a #30 ENSGT01040000240833 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 Laterata ANCESTRAL SPECIES 8 ENSGT00940000165033 ENSGT00940000165983 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a ENSGT00530000063681.b.a Argentine black and white tegu MODERN SPECIES 10 FAM172A (ENSSMRG00000007712) NR2F1 (ENSSMRG00000007704) CETN3 (ENSSMRG00000007661) #15 ARRDC3 (ENSSMRG00000007657) #9 ADGRV1 (ENSSMRG00000007551) #10 LYSMD3 (ENSSMRG00000007513) #12 ENSSMRG00000007509 MBLAC2 (ENSSMRG00000007505) #14 ENSSMRG00000007503 MEF2C (ENSSMRG00000007471) #16 TMEM161B (ENSSMRG00000007438) #17 ENSSMRG00000007433 CCNH (ENSSMRG00000007424) #18 RASA1 (ENSSMRG00000007402) #19 COX7C (ENSSMRG00000007352) #20 EDIL3 (ENSSMRG00000007329) #22 ENSSMRG00000007280 HAPLN1 (ENSSMRG00000007276) #23 VCAN (ENSSMRG00000006719) #24 XRCC4 (ENSSMRG00000006677) #25 TMEM167A (ENSSMRG00000006663) #26 ENSSMRG00000006636 #29 ENSSMRG00000006627 ENSSMRG00000006633 RPS23 (ENSSMRG00000006623) #30 ATG10 (ENSSMRG00000006616) #31 ENSSMRG00000006600 SSBP2 (ENSSMRG00000006585) #33 ENSSMRG00000006560 ZCCHC9 (ENSSMRG00000006556) #35 CKMT2 (ENSSMRG00000006550) #36 Common wall lizard MODERN SPECIES 2 FAM172A (ENSPMRG00000012980) NR2F1 (ENSPMRG00000012967) ARRDC3 (ENSPMRG00000012951) #9 ADGRV1 (ENSPMRG00000012759) #10 LYSMD3 (ENSPMRG00000012703) #12 ENSPMRG00000012701 MBLAC2 (ENSPMRG00000012699) #14 CETN3 (ENSPMRG00000012695) #15 ENSPMRG00000012694 MEF2C (ENSPMRG00000012686) #16 ENSPMRG00000012673 TMEM161B (ENSPMRG00000012659) #17 CCNH (ENSPMRG00000012638) #18 RASA1 (ENSPMRG00000012629) #19 COX7C (ENSPMRG00000012625) #20 EDIL3 (ENSPMRG00000012616) #22 HAPLN1 (ENSPMRG00000012609) #23 ENSPMRG00000012606 ENSPMRG00000012576 #24 ENSPMRG00000012564 #24 XRCC4 (ENSPMRG00000012553) #25 TMEM167A (ENSPMRG00000012546) #26 ENSPMRG00000012542 #29 ENSPMRG00000012537 ENSPMRG00000012535 ##30 RPS23 (ENSPMRG00000012532) #30 ENSPMRG00000012529 ENSPMRG00000012528 ATG10 (ENSPMRG00000012525) #31 SSBP2 (ENSPMRG00000012480) #33 ACOT12 (ENSPMRG00000012439) #34 Toxicofera ANCESTRAL SPECIES 6 ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT01030000235102 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01040000240833 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Elapidae ANCESTRAL SPECIES 7 ENSGT00940000156031 ENSGT00940000158953.g ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT01030000235102 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b.b ##30 ENSGT00550000074784.b.a.a ##30 ENSGT01040000240833 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Elapidae_a ANCESTRAL SPECIES 9 ENSGT00940000156031 ENSGT00940000158953.g ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT01030000235102 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b.b ##30 ENSGT00550000074784.b.a.a ##30 ENSGT01040000240833.e ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Acanthophiinae ANCESTRAL SPECIES 9 ENSGT00940000156031 ENSGT00940000158953.g ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT01030000235102 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b.b ##30 ENSGT00550000074784.b.a.a ##30 ENSGT01040000240833.e ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Mainland tiger snake MODERN SPECIES 1 KIAA0825 (ENSNSUG00000006158) FAM172A (ENSNSUG00000006156) NR2F1 (ENSNSUG00000006155) ARRDC3 (ENSNSUG00000006123) #9 ENSNSUG00000006121 #10 ENSNSUG00000006114 #10 LYSMD3 (ENSNSUG00000006111) #12 MBLAC2 (ENSNSUG00000006110) #14 CETN3 (ENSNSUG00000006108) #15 MEF2C (ENSNSUG00000005871) #16 TMEM161B (ENSNSUG00000005819) #17 CCNH (ENSNSUG00000005790) #18 RASA1 (ENSNSUG00000004867) #19 ENSNSUG00000004862 ENSNSUG00000004860 EDIL3 (ENSNSUG00000004852) #22 HAPLN1 (ENSNSUG00000004848) #23 ENSNSUG00000004844 #24 XRCC4 (ENSNSUG00000004725) #25 TMEM167A (ENSNSUG00000004709) #26 ENSNSUG00000004706 #29 ENSNSUG00000004701 ##30 ENSNSUG00000004696 ATG10 (ENSNSUG00000004695) #31 SSBP2 (ENSNSUG00000004681) #33 ENSNSUG00000004679 ZCCHC9 (ENSNSUG00000004677) #35 CKMT2 (ENSNSUG00000004674) #36 RASGRF2 (ENSNSUG00000004672) #37 MSH3 (ENSNSUG00000004670) ENSNSUG00000004669 Eastern brown snake MODERN SPECIES 2 KIAA0825 (ENSPTXG00000005117) FAM172A (ENSPTXG00000005114) NR2F1 (ENSPTXG00000005112) ENSPTXG00000005110 ARRDC3 (ENSPTXG00000005107) #9 ENSPTXG00000005106 #10 ENSPTXG00000005103 #10 LYSMD3 (ENSPTXG00000005102) #12 MBLAC2 (ENSPTXG00000005101) #14 CETN3 (ENSPTXG00000005100) #15 MEF2C (ENSPTXG00000005099) #16 TMEM161B (ENSPTXG00000005097) #17 CCNH (ENSPTXG00000005096) #18 RASA1 (ENSPTXG00000005095) #19 ENSPTXG00000005093 EDIL3 (ENSPTXG00000004710) #22 HAPLN1 (ENSPTXG00000004709) #23 ENSPTXG00000004708 #24 XRCC4 (ENSPTXG00000004688) #25 TMEM167A (ENSPTXG00000004687) #26 ENSPTXG00000004686 ENSPTXG00000004685 #29 ENSPTXG00000004684 ENSPTXG00000004683 ##30 ENSPTXG00000004682 ##30 ENSPTXG00000004681 ATG10 (ENSPTXG00000004680) #31 SSBP2 (ENSPTXG00000004679) #33 ACOT12 (ENSPTXG00000004678) #34 ZCCHC9 (ENSPTXG00000004677) #35 CKMT2 (ENSPTXG00000004676) #36 Indian cobra MODERN SPECIES 1 MSH3 (ENSNNAG00000002548) RASGRF2 (ENSNNAG00000002418) #37 CKMT2 (ENSNNAG00000002396) #36 ZCCHC9 (ENSNNAG00000002384) #35 SSBP2 (ENSNNAG00000002360) #33 ATG10 (ENSNNAG00000002344) #31 ENSNNAG00000002336 ##30 ENSNNAG00000002327 ##30 ENSNNAG00000002308 ENSNNAG00000002292 #29 ENSNNAG00000002286 TMEM167A (ENSNNAG00000002280) #26 XRCC4 (ENSNNAG00000002227) #25 ENSNNAG00000002196 #24 HAPLN1 (ENSNNAG00000002181) #23 EDIL3 (ENSNNAG00000002046) #22 ENSNNAG00000002013 RASA1 (ENSNNAG00000001568) #19 CCNH (ENSNNAG00000001430) #18 ENSNNAG00000001415 #17 ENSNNAG00000001402 #17 MEF2C (ENSNNAG00000001372) #16 CETN3 (ENSNNAG00000001354) #15 MBLAC2 (ENSNNAG00000001338) #14 LYSMD3 (ENSNNAG00000001322) #12 ADGRV1 (ENSNNAG00000001181) #10 ARRDC3 (ENSNNAG00000001125) #9 NR2F1 (ENSNNAG00000001101) FAM172A (ENSNNAG00000001060) KIAA0825 (ENSNNAG00000000974) ENSNNAG00000000954 Lizard MODERN SPECIES 1 NR2F1 (ENSACAG00000013324) ARRDC3 (ENSACAG00000013384) #9 ADGRV1 (ENSACAG00000013431) #10 LYSMD3 (ENSACAG00000035122) #12 MBLAC2 (ENSACAG00000013646) #14 ENSACAG00000038915 ENSACAG00000041753 MEF2C (ENSACAG00000000488) #16 TMEM161B (ENSACAG00000000583) #17 ENSACAG00000044209 CCNH (ENSACAG00000000627) #18 RASA1 (ENSACAG00000000769) #19 COX7C (ENSACAG00000001016) #20 ENSACAG00000009101 ENSACAG00000038280 EDIL3 (ENSACAG00000011454) #22 HAPLN1 (ENSACAG00000011432) #23 ENSACAG00000037910 VCAN (ENSACAG00000011195) #24 ENSACAG00000037657 XRCC4 (ENSACAG00000011160) #25 TMEM167A (ENSACAG00000011153) #26 ENSACAG00000037915 #29 ENSACAG00000011136 RPS23 (ENSACAG00000044983) #30 ENSACAG00000035602 ATG10 (ENSACAG00000038343) #31 ENSACAG00000045454 SSBP2 (ENSACAG00000029227) #33 ACOT12 (ENSACAG00000010998) #34 ZCCHC9 (ENSACAG00000010965) #35 tuatara MODERN SPECIES 1902 EDIL3 (ENSSPUG00000018658) #22 Archelosauria ANCESTRAL SPECIES 7 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT01080000257332.A.b ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01040000241481 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT01040000240833 ENSGT00550000074784.a.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 Cryptodira ANCESTRAL SPECIES 9 ENSGT00940000165033 ENSGT00940000165983 ENSGT00530000063907.c.a.a ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00550000074784.a.a #30 ENSGT01040000240833 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00940000165033 ENSGT00940000165983 ENSGT00530000063907.c.a.a ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01040000240833 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Emydidae ANCESTRAL SPECIES 7 ENSGT00610000086112 ENSGT00530000063907.c.a.b ENSGT00530000063907.c.a.a ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880.gb #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01040000240833 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 painted turtle MODERN SPECIES 695 ENSCPBG00000010563 #10 ENSCPBG00000010580 ENSCPBG00000010585 #10 RHOA (ENSCPBG00000010596) LYSMD3 (ENSCPBG00000010597) #12 ENSCPBG00000010601 MBLAC2 (ENSCPBG00000010603) #14 CETN3 (ENSCPBG00000010605) #15 MEF2C (ENSCPBG00000010619) #16 TMEM161B (ENSCPBG00000010638) #17 CCNH (ENSCPBG00000010650) #18 RASA1 (ENSCPBG00000010658) #19 ENSCPBG00000010666 COX7C (ENSCPBG00000010669) #20 ENSCPBG00000010674 EDIL3 (ENSCPBG00000010684) #22 HAPLN1 (ENSCPBG00000010699) #23 VCAN (ENSCPBG00000010709) #24 XRCC4 (ENSCPBG00000010726) #25 TMEM167A (ENSCPBG00000010731) #26 ENSCPBG00000010740 #29 ENSCPBG00000010746 ##30 ENSCPBG00000010748 RPS23 (ENSCPBG00000010751) #30 ENSCPBG00000010753 ATG10 (ENSCPBG00000010761) #31 SSBP2 (ENSCPBG00000010799) #33 ACOT12 (ENSCPBG00000010812) #34 ZCCHC9 (ENSCPBG00000010819) #35 CKMT2 (ENSCPBG00000010825) #36 RASGRF2 (ENSCPBG00000010831) #37 Three-toed box turtle MODERN SPECIES 29 KIAA0825 (ENSTMTG00000013360) FAM172A (ENSTMTG00000013334) NR2F1 (ENSTMTG00000013324) ARRDC3 (ENSTMTG00000013310) #9 ENSTMTG00000013290 #10 ENSTMTG00000013154 #10 LYSMD3 (ENSTMTG00000013133) #12 ENSTMTG00000013128 MBLAC2 (ENSTMTG00000013121) #14 CETN3 (ENSTMTG00000013112) #15 MEF2C (ENSTMTG00000013068) #16 ENSTMTG00000013044 #17 CCNH (ENSTMTG00000013023) #18 RASA1 (ENSTMTG00000012988) #19 COX7C (ENSTMTG00000012967) #20 EDIL3 (ENSTMTG00000012653) #22 HAPLN1 (ENSTMTG00000012604) #23 ENSTMTG00000012578 #24 ENSTMTG00000012555 #24 XRCC4 (ENSTMTG00000012541) #25 TMEM167A (ENSTMTG00000012521) #26 ENSTMTG00000012494 ENSTMTG00000012480 #29 ENSTMTG00000012462 #30 ATG10 (ENSTMTG00000012339) #31 SSBP2 (ENSTMTG00000012293) #33 ENSTMTG00000012276 ZCCHC9 (ENSTMTG00000012264) #35 CKMT2 (ENSTMTG00000012229) #36 RASGRF2 (ENSTMTG00000012030) #37 MSH3 (ENSTMTG00000011972) Testudinidae ANCESTRAL SPECIES 15 ENSGT00940000165033 ENSGT00940000165983 ENSGT00530000063907.c.a.a ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT01040000240833.a ENSGT00550000074784.a.a #30 ENSGT01040000240833.b ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 Abingdon island giant tortoise MODERN SPECIES 328 EDIL3 (ENSCABG00000019077) #22 SARM1 (ENSCABG00000019078) VTN (ENSCABG00000019080) ENSCABG00000019081 SEBOX (ENSCABG00000019082) ENSCABG00000019085 POLDIP2 (ENSCABG00000019093) Goode s thornscrub tortoise MODERN SPECIES 20 ENSGEVG00005006220 FAM172A (ENSGEVG00005006265) NR2F1 (ENSGEVG00005006372) ARRDC3 (ENSGEVG00005006404) #9 ENSGEVG00005006434 ADGRV1 (ENSGEVG00005006505) #10 LYSMD3 (ENSGEVG00005006783) #12 ENSGEVG00005006802 MBLAC2 (ENSGEVG00005006820) #14 CETN3 (ENSGEVG00005006845) #15 MEF2C (ENSGEVG00005006877) #16 TMEM161B (ENSGEVG00005006912) #17 CCNH (ENSGEVG00005006937) #18 RASA1 (ENSGEVG00005007316) #19 COX7C (ENSGEVG00005009127) #20 EDIL3 (ENSGEVG00005009290) #22 HAPLN1 (ENSGEVG00005010002) #23 ENSGEVG00005010195 #24 ENSGEVG00005010286 #24 XRCC4 (ENSGEVG00005010349) #25 TMEM167A (ENSGEVG00005010408) #26 ENSGEVG00005010430 #29 ENSGEVG00005010461 RPS23 (ENSGEVG00005010591) #30 ENSGEVG00005010649 ##30 ENSGEVG00005010746 ATG10 (ENSGEVG00005010800) #31 SSBP2 (ENSGEVG00005010855) #33 ACOT12 (ENSGEVG00005010989) #34 ZCCHC9 (ENSGEVG00005011427) #35 CKMT2 (ENSGEVG00005011478) #36 Chinese turtle MODERN SPECIES 1168 EDIL3 (ENSPSIG00000016123) #22 HAPLN1 (ENSPSIG00000016121) #23 VCAN (ENSPSIG00000016053) #24 XRCC4 (ENSPSIG00000016043) #25 TMEM167A (ENSPSIG00000016032) #26 ENSPSIG00000016026 #29 ENSPSIG00000016011 ##30 RPS23 (ENSPSIG00000016006) #30 ATG10 (ENSPSIG00000015998) #31 SSBP2 (ENSPSIG00000015983) #33 ACOT12 (ENSPSIG00000015897) #34 ZCCHC9 (ENSPSIG00000015854) #35 CKMT2 (ENSPSIG00000015748) #36 RASGRF2 (ENSPSIG00000015555) #37 ENSPSIG00000015542 MSH3 (ENSPSIG00000015278) Archosauria ANCESTRAL SPECIES 1 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT01080000257332.A.b ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT01040000241481 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Aves ANCESTRAL SPECIES 4 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT01080000257332.A.b ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846.q #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Neognathae ANCESTRAL SPECIES 19 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c.b #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT01080000257332.A.b ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846.q #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Galloanserae ANCESTRAL SPECIES 18 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c.b #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT01080000257332.A.b.a.a ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846.q #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Phasianidae ANCESTRAL SPECIES 5 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c.b #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846.q #19 ENSGT00390000018086 #20 ENSGT01070000254325.a.b.a ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102.k.a #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c.b #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846.q #19 ENSGT00390000018086 #20 ENSGT01070000254325.a.b.a ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102.k.a #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT01030000234916 ENSGT00550000074784.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 Chicken MODERN SPECIES 131 ENSGALG00010006074 ENSGALG00010006600 ENSGALG00010006034 ENSGALG00010005451 ENSGALG00010005976 ENSGALG00010006265 ENSGALG00010005947 ENSGALG00010006364 ENSGALG00010005908 ENSGALG00010006044 CCNH (ENSGALG00010005887) #18 ENSGALG00010005899 #19 COX7C (ENSGALG00010006252) #20 ENSGALG00010006257 ENSGALG00010005481 EDIL3 (ENSGALG00010006096) #22 HAPLN1 (ENSGALG00010006730) #23 VCAN (ENSGALG00010006739) #24 XRCC4 (ENSGALG00010006821) #25 TMEM167A (ENSGALG00010006851) #26 ENSGALG00010006923 ATP6AP1L (ENSGALG00010006121) #29 RPS23 (ENSGALG00010006178) ##30 ATG10 (ENSGALG00010006223) #31 SSBP2 (ENSGALG00010006575) #33 ACOT12 (ENSGALG00010006588) #34 ZCCHC9 (ENSGALG00010007097) #35 CKMT2 (ENSGALG00010007143) #36 RASGRF2 (ENSGALG00010007166) #37 MSH3 (ENSGALG00010007217) DHFR (ENSGALG00010007224) Turkey MODERN SPECIES 1299 KIAA0825 (ENSMGAG00000008159) FAM172A (ENSMGAG00000018212) ENSMGAG00000021056 #10 ENSMGAG00000004687 #9 ENSMGAG00000022052 #10 LYSMD3 (ENSMGAG00000008206) #12 ENSMGAG00000008203 MBLAC2 (ENSMGAG00000020818) #14 CETN3 (ENSMGAG00000016928) #15 MEF2C (ENSMGAG00000021783) #16 TMEM161B (ENSMGAG00000008210) #17 CCNH (ENSMGAG00000008253) #18 RASA1 (ENSMGAG00000008292) #19 COX7C (ENSMGAG00000019652) #20 ENSMGAG00000008654 EDIL3 (ENSMGAG00000022807) #22 HAPLN1 (ENSMGAG00000020012) #23 ENSMGAG00000020049 #24 ENSMGAG00000020009 #24 ENSMGAG00000017132 #24 XRCC4 (ENSMGAG00000018677) #25 ENSMGAG00000003952 #29 RPS23 (ENSMGAG00000016932) #30 ENSMGAG00000020585 SSBP2 (ENSMGAG00000020044) #33 ACOT12 (ENSMGAG00000021238) #34 ZCCHC9 (ENSMGAG00000006841) #35 CKMT2 (ENSMGAG00000007813) #36 RASGRF2 (ENSMGAG00000008333) #37 MSH3 (ENSMGAG00000008310) ENSMGAG00000002698 Japanese quail MODERN SPECIES 699 FAM172A (ENSCJPG00005000113) NR2F1 (ENSCJPG00005000146) ARRDC3 (ENSCJPG00005000230) #9 ADGRV1 (ENSCJPG00005000279) #10 LYSMD3 (ENSCJPG00005000389) #12 ENSCJPG00005000390 CETN3 (ENSCJPG00005000396) #15 MEF2C (ENSCJPG00005000422) #16 TMEM161B (ENSCJPG00005000442) #17 CCNH (ENSCJPG00005000482) #18 RASA1 (ENSCJPG00005000488) #19 COX7C (ENSCJPG00005000502) #20 ENSCJPG00005000513 ENSCJPG00005000521 #29 RPS23 (ENSCJPG00005000525) #30 EDIL3 (ENSCJPG00005000531) #22 HAPLN1 (ENSCJPG00005000544) #23 VCAN (ENSCJPG00005000555) #24 XRCC4 (ENSCJPG00005000577) #25 TMEM167A (ENSCJPG00005000681) #26 ATG10 (ENSCJPG00005000682) #31 SSBP2 (ENSCJPG00005000692) #33 ACOT12 (ENSCJPG00005000706) #34 ZCCHC9 (ENSCJPG00005000711) #35 CKMT2 (ENSCJPG00005000716) #36 RASGRF2 (ENSCJPG00005000719) #37 MSH3 (ENSCJPG00005000723) ENSCJPG00005000728 ANKRD34B (ENSCJPG00005000731) FAM151B (ENSCJPG00005000734) ENSCJPG00005000738 Anatidae ANCESTRAL SPECIES 91 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00440000039046 ENSGT00390000015930 ENSGT00440000039958 ENSGT00940000154290.b ENSGT00530000063681.b.a Pink-footed goose MODERN SPECIES 141 ENSABRG00000009024 EDIL3 (ENSABRG00000008986) #22 ENSABRG00000008976 HAPLN1 (ENSABRG00000008967) #23 VCAN (ENSABRG00000008943) #24 XRCC4 (ENSABRG00000008920) #25 TMEM167A (ENSABRG00000008918) #26 ENSABRG00000008899 #29 RPS23 (ENSABRG00000008885) #30 ATG10 (ENSABRG00000008857) #31 SSBP2 (ENSABRG00000008433) #33 ACOT12 (ENSABRG00000008346) #34 ENSABRG00000008304 RAD17 (ENSABRG00000008290) AK6 (ENSABRG00000008278) CCDC125 (ENSABRG00000008267) ENSABRG00000008241 Duck MODERN SPECIES 4281 GNG10 (ENSAPLG00000027672) DNAJC25 (ENSAPLG00000006443) ECPAS (ENSAPLG00000006453) SMC2 (ENSAPLG00000007236) ENSAPLG00000008339 PTGR1 (ENSAPLG00000008342) TXN (ENSAPLG00000008771) SVEP1 (ENSAPLG00000008787) MUSK (ENSAPLG00000009215) LPAR1 (ENSAPLG00000010035) ENSAPLG00000010110 TMEM215 (ENSAPLG00000028116) ELAVL2 (ENSAPLG00000010429) ENSAPLG00000022392 ENSAPLG00000030914 EDIL3 (ENSAPLG00000016364) #22 HAPLN1 (ENSAPLG00000016285) #23 VCAN (ENSAPLG00000016034) #24 XRCC4 (ENSAPLG00000016008) #25 TMEM167A (ENSAPLG00000015984) #26 ENSAPLG00000005367 #29 RPS23 (ENSAPLG00000023076) #30 ATG10 (ENSAPLG00000005440) #31 SSBP2 (ENSAPLG00000005451) #33 ACOT12 (ENSAPLG00000005659) #34 ZCCHC9 (ENSAPLG00000005968) #35 RAD17 (ENSAPLG00000006015) AK6 (ENSAPLG00000024406) CCDC125 (ENSAPLG00000006296) ENSAPLG00000006547 FAM151B (ENSAPLG00000026983) Neognathae_b ANCESTRAL SPECIES 5 ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c.b #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846.q #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a.f #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Passeriformes ANCESTRAL SPECIES 44 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a.f #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Great tit MODERN SPECIES 642 ENSPMJG00000001288 MSH3 (ENSPMJG00000000269) RASGRF2 (ENSPMJG00000000142) #37 CKMT2 (ENSPMJG00000014299) #36 ZCCHC9 (ENSPMJG00000014297) #35 ACOT12 (ENSPMJG00000014296) #34 SSBP2 (ENSPMJG00000014294) #33 ATG10 (ENSPMJG00000014291) #31 ENSPMJG00000014290 ENSPMJG00000014289 ##30 ENSPMJG00000014288 #29 TMEM167A (ENSPMJG00000014283) #26 XRCC4 (ENSPMJG00000014280) #25 VCAN (ENSPMJG00000014262) #24 HAPLN1 (ENSPMJG00000014261) #23 EDIL3 (ENSPMJG00000014240) #22 COX7C (ENSPMJG00000014193) #20 MEGF10 (ENSPMJG00000014184) PRRC1 (ENSPMJG00000014182) C1QL1 (ENSPMJG00000014176) SLC12A2 (ENSPMJG00000014165) FBN2 (ENSPMJG00000012768) FN3KRP (ENSPMJG00000012767) ENSPMJG00000012766 MARCHF3 (ENSPMJG00000012765) ENSPMJG00000012764 PHAX (ENSPMJG00000012763) KLF4 (ENSPMJG00000012759) RAD23B (ENSPMJG00000012758) ZNF462 (ENSPMJG00000012754) ENSPMJG00000012753 Passeriformes_d ANCESTRAL SPECIES 40 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a.f #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Passeriformes_g ANCESTRAL SPECIES 48 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a.f #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Medium ground finch MODERN SPECIES 134 EDIL3 (ENSGFOG00000003723) #22 HAPLN1 (ENSGFOG00000003764) #23 VCAN (ENSGFOG00000003782) #24 XRCC4 (ENSGFOG00000003823) #25 TMEM167A (ENSGFOG00000003850) #26 ENSGFOG00000003856 #29 RPS23 (ENSGFOG00000003868) ##30 ENSGFOG00000003887 ATG10 (ENSGFOG00000003901) #31 SSBP2 (ENSGFOG00000003918) #33 ACOT12 (ENSGFOG00000003959) #34 ZCCHC9 (ENSGFOG00000004014) #35 ENSGFOG00000004036 #36 RASGRF2 (ENSGFOG00000004158) #37 MSH3 (ENSGFOG00000004209) ENSGFOG00000004376 Passeroidea ANCESTRAL SPECIES 47 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.a.a #30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a.f #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 ENSGT00390000012355.A.a Zebra finch MODERN SPECIES 104 ZNF462 (ENSTGUG00000006352) RAD23B (ENSTGUG00000006372) KLF4 (ENSTGUG00000006403) ENSTGUG00000026787 PHAX (ENSTGUG00000006427) LMNB1 (ENSTGUG00000006435) MARCHF3 (ENSTGUG00000006489) ENSTGUG00000006493 MEGF10 (ENSTGUG00000006496) PRRC1 (ENSTGUG00000006537) SLC12A2 (ENSTGUG00000006546) FBN2 (ENSTGUG00000006641) ENSTGUG00000027830 ENSTGUG00000020662 COX7C (ENSTGUG00000006814) #20 EDIL3 (ENSTGUG00000006826) #22 HAPLN1 (ENSTGUG00000006865) #23 VCAN (ENSTGUG00000006883) #24 XRCC4 (ENSTGUG00000006911) #25 TMEM167A (ENSTGUG00000019292) #26 ENSTGUG00000021524 ENSTGUG00000006935 #29 RPS23 (ENSTGUG00000017554) #30 ENSTGUG00000006821 ATG10 (ENSTGUG00000006943) #31 SSBP2 (ENSTGUG00000006949) #33 ACOT12 (ENSTGUG00000006971) #34 ZCCHC9 (ENSTGUG00000006994) #35 CKMT2 (ENSTGUG00000007005) #36 RASGRF2 (ENSTGUG00000007037) #37 MSH3 (ENSTGUG00000007066) Common canary MODERN SPECIES 56 AK6 (ENSSCAG00000009418) CCDC125 (ENSSCAG00000009413) ENSSCAG00000009404 FAM151B (ENSSCAG00000009398) ENSSCAG00000009394 ENSSCAG00000009393 MSH3 (ENSSCAG00000009385) RASGRF2 (ENSSCAG00000008895) #37 ENSSCAG00000008780 #36 ZCCHC9 (ENSSCAG00000008749) #35 ACOT12 (ENSSCAG00000008727) #34 SSBP2 (ENSSCAG00000008712) #33 ATG10 (ENSSCAG00000008706) #31 RPS23 (ENSSCAG00000008698) #30 ENSSCAG00000008690 #29 EDIL3 (ENSSCAG00000008613) #22 HAPLN1 (ENSSCAG00000008587) #23 VCAN (ENSSCAG00000008575) #24 XRCC4 (ENSSCAG00000008554) #25 TMEM167A (ENSSCAG00000008549) #26 Flycatcher MODERN SPECIES 561 ENSFALG00000000833 ENSFALG00000000816 CETN3 (ENSFALG00000009026) #15 LYSMD3 (ENSFALG00000026089) #12 ADGRV1 (ENSFALG00000009043) #10 ARRDC3 (ENSFALG00000009068) #9 NR2F1 (ENSFALG00000025548) FAM172A (ENSFALG00000009072) KIAA0825 (ENSFALG00000009074) SLF1 (ENSFALG00000009078) MCTP1 (ENSFALG00000009081) SKIC3 (ENSFALG00000009093) ARSK (ENSFALG00000009095) ENSFALG00000009108 ENSFALG00000027608 EDIL3 (ENSFALG00000023958) #22 HAPLN1 (ENSFALG00000012880) #23 VCAN (ENSFALG00000012891) #24 XRCC4 (ENSFALG00000012903) #25 TMEM167A (ENSFALG00000025743) #26 ENSFALG00000012660 #29 RPS23 (ENSFALG00000012668) #30 ATG10 (ENSFALG00000012675) #31 SSBP2 (ENSFALG00000012689) #33 ENSFALG00000012745 #36 ACOT12 (ENSFALG00000012700) #34 ZCCHC9 (ENSFALG00000012709) #35 RASGRF2 (ENSFALG00000012784) #37 MSH3 (ENSFALG00000012814) ENSFALG00000012822 ANKRD34B (ENSFALG00000012833) Neognathae_c ANCESTRAL SPECIES 2 ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c.b ENSGT00940000157876 ENSGT00940000155411.c.b #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846.q #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT00550000074784.b ##30 ENSGT00550000074784.a.b ##30 ENSGT00390000000924 #31 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a.f #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00390000010283 Kakapo MODERN SPECIES 19 SLF1 (ENSSHBG00005003296) KIAA0825 (ENSSHBG00005003330) FAM172A (ENSSHBG00005003361) NR2F1 (ENSSHBG00005003375) ENSSHBG00005003420 #9 ADGRV1 (ENSSHBG00005003448) #10 LYSMD3 (ENSSHBG00005003517) #12 ENSSHBG00005003528 MBLAC2 (ENSSHBG00005003534) #14 CETN3 (ENSSHBG00005003545) #15 MEF2C (ENSSHBG00005003556) #16 TMEM161B (ENSSHBG00005003651) #17 CCNH (ENSSHBG00005003674) #18 ENSSHBG00005003804 #19 COX7C (ENSSHBG00005004373) #20 EDIL3 (ENSSHBG00005001414) #22 ENSSHBG00005001456 HAPLN1 (ENSSHBG00005001483) #23 VCAN (ENSSHBG00005001512) #24 XRCC4 (ENSSHBG00005001575) #25 ENSSHBG00005001705 ENSSHBG00005001734 #29 RPS23 (ENSSHBG00005001774) ##30 ENSSHBG00005001802 ATG10 (ENSSHBG00005001819) #31 SSBP2 (ENSSHBG00005001883) #33 ENSSHBG00005001901 ACOT12 (ENSSHBG00005001923) #34 ZCCHC9 (ENSSHBG00005001941) #35 ENSSHBG00005001986 #36 RASGRF2 (ENSSHBG00005002079) #37 Golden eagle MODERN SPECIES 91 ENSACCG00020012920 FAM172A (ENSACCG00020013051) NR2F1 (ENSACCG00020013131) ARRDC3 (ENSACCG00020013149) #9 ENSACCG00020013174 #10 ENSACCG00020013302 #10 LYSMD3 (ENSACCG00020013378) #12 ENSACCG00020013396 MBLAC2 (ENSACCG00020013405) #14 CETN3 (ENSACCG00020013416) #15 MEF2C (ENSACCG00020013466) #16 TMEM161B (ENSACCG00020013554) #17 CCNH (ENSACCG00020013615) #18 RASA1 (ENSACCG00020013845) #19 COX7C (ENSACCG00020013971) #20 EDIL3 (ENSACCG00020013998) #22 HAPLN1 (ENSACCG00020014033) #23 VCAN (ENSACCG00020014055) #24 XRCC4 (ENSACCG00020014071) #25 TMEM167A (ENSACCG00020014094) #26 ENSACCG00020014107 #29 ENSACCG00020014125 ENSACCG00020014140 ##30 ATG10 (ENSACCG00020014163) #31 SSBP2 (ENSACCG00020014198) #33 ACOT12 (ENSACCG00020014240) #34 ZCCHC9 (ENSACCG00020014264) #35 CKMT2 (ENSACCG00020014280) #36 RASGRF2 (ENSACCG00020014507) #37 MSH3 (ENSACCG00020014684) ENSACCG00020014707 African ostrich MODERN SPECIES 651 EDIL3 (ENSSCUG00000009760) #22 HAPLN1 (ENSSCUG00000009758) #23 Australian saltwater crocodile MODERN SPECIES 29 KIAA0825 (ENSCPRG00005002937) FAM172A (ENSCPRG00005002912) NR2F1 (ENSCPRG00005002896) ARRDC3 (ENSCPRG00005002885) #9 ADGRV1 (ENSCPRG00005002739) #10 LYSMD3 (ENSCPRG00005002691) #12 ENSCPRG00005002687 MBLAC2 (ENSCPRG00005002685) #14 CETN3 (ENSCPRG00005002682) #15 MEF2C (ENSCPRG00005002661) #16 TMEM161B (ENSCPRG00005002646) #17 CCNH (ENSCPRG00005002621) #18 RASA1 (ENSCPRG00005002296) #19 COX7C (ENSCPRG00005002239) #20 ENSCPRG00005002231 EDIL3 (ENSCPRG00005002211) #22 HAPLN1 (ENSCPRG00005002178) #23 VCAN (ENSCPRG00005002150) #24 XRCC4 (ENSCPRG00005002138) #25 TMEM167A (ENSCPRG00005002127) #26 ENSCPRG00005002117 #29 ENSCPRG00005002110 ##30 ENSCPRG00005002107 RPS23 (ENSCPRG00005002101) #30 ENSCPRG00005002095 ATG10 (ENSCPRG00005002089) #31 ENSCPRG00005002080 ENSCPRG00005002064 SSBP2 (ENSCPRG00005001899) #33 ACOT12 (ENSCPRG00005001874) #34 ZCCHC9 (ENSCPRG00005001871) #35 Anura ANCESTRAL SPECIES 9 ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01090000262566 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00390000017079 #25 ENSGT00940000155186 #26 ENSGT00940000158156 #29 ENSGT01090000262138 ENSGT00550000074784.b ##30 ENSGT00950000183049.A #33 ENSGT00940000160328 #34 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000165661 ENSGT00390000012355.A.a ENSGT00530000063681.b.a ENSGT00940000154290.b Frog MODERN SPECIES arrdc3 (ENSXETG00000018085) #9 adgrv1 (ENSXETG00000019628) #10 lysmd3 (ENSXETG00000019627) #12 polr3g (ENSXETG00000037832) ENSXETG00000047093 cetn3 (ENSXETG00000039666) #14 mef2c (ENSXETG00000007038) #16 ENSXETG00000042997 tmem161b (ENSXETG00000011719) #17 ccnh (ENSXETG00000011718) #18 rasa1 (ENSXETG00000011717) #19 ENSXETG00000040223 ENSXETG00000049068 cox7c (ENSXETG00000025081) #20 ENSXETG00000035340 edil3 (ENSXETG00000019793) #22 hapln1 (ENSXETG00000019797) #23 vcan (ENSXETG00000027815) #24 xrcc4 (ENSXETG00000027814) #25 tmem167a (ENSXETG00000027813) #26 ENSXETG00000039925 atp6ap1l (ENSXETG00000030377) #29 rps23 (ENSXETG00000027811) ##30 ENSXETG00000039289 ssbp2 (ENSXETG00000027809) #33 acot12 (ENSXETG00000027806) #34 zcchc9 (ENSXETG00000027804) #35 avd (ENSXETG00000033506) ENSXETG00000041782 rasgrf2 (ENSXETG00000022942) #37 msh3 (ENSXETG00000022941) Leishan spiny toad MODERN SPECIES ENSLLEG00000002604 MBLAC2 (ENSLLEG00000002593) #14 CETN3 (ENSLLEG00000002555) #15 ENSLLEG00000002534 MEF2C (ENSLLEG00000002434) #16 ENSLLEG00000002375 TMEM161B (ENSLLEG00000002331) #17 ENSLLEG00000002303 CCNH (ENSLLEG00000002231) #18 RASA1 (ENSLLEG00000002067) #19 ENSLLEG00000002025 ENSLLEG00000002019 COX7C (ENSLLEG00000001998) #20 ENSLLEG00000001989 ENSLLEG00000001981 EDIL3 (ENSLLEG00000001894) #22 ENSLLEG00000001869 HAPLN1 (ENSLLEG00000001856) #23 ENSLLEG00000001847 ENSLLEG00000001829 #24 ENSLLEG00000001820 ENSLLEG00000001812 ENSLLEG00000001808 XRCC4 (ENSLLEG00000001793) #25 TMEM167A (ENSLLEG00000001776) #26 ENSLLEG00000001761 ENSLLEG00000001752 ENSLLEG00000001745 ENSLLEG00000001725 #29 ENSLLEG00000001707 ENSLLEG00000001694 ##30 Coelacanth MODERN SPECIES 1306 ENSLACG00000010672 EDIL3 (ENSLACG00000012141) #22 Actinopterygii ANCESTRAL SPECIES 67 ENSGT00610000086112 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01030000235264 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00950000183049.E ##33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000165661 ENSGT00390000012355.A.a ENSGT00530000063681.b.a ENSGT00940000154290.b Neopterygii ANCESTRAL SPECIES 46 ENSGT00610000086112 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000165856 ENSGT00390000017819 #14 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144 #22 ENSGT00940000159267 #23 ENSGT00940000156102 #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00390000000924 #31 ENSGT00950000183049.E ##33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679 #37 ENSGT00550000074949 ENSGT00940000165661 ENSGT00390000012355.A.a ENSGT00530000063681.b.a Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 132 ENSGT00610000086112 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000165856 ENSGT01040000240520 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00390000000924 #31 ENSGT00950000183049.E ##33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679.d #37 ENSGT00390000012355.A.a.a.b ENSGT00940000154290.b ENSGT00940000163574 Osteoglossiformes ANCESTRAL SPECIES 142 ENSGT00940000161418 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372.b ENSGT00940000160516.h ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000156031.e.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000158711 #12 ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00390000000672.a.b #17 ENSGT00940000158144.b #22 ENSGT00940000158144.a #22 ENSGT00940000159267 #23 ENSGT00940000156102.q #24 ENSGT00940000155186.a #26 ENSGT00940000166014 ENSGT00950000183049.E.a ##33 ENSGT00940000155679.c #37 ENSGT00550000074949 ENSGT00940000165661.b ENSGT00390000012355.A.a.b ENSGT00530000063681.b.a ENSGT00940000166823 ENSGT00390000015930 ENSGT00940000155771.d ENSGT00730000110989.c.b ENSGT00490000043395 Asian bonytongue MODERN SPECIES 8 KIAA0825 (ENSSFOG00015016407) fam172a (ENSSFOG00015016507) nr2f1a (ENSSFOG00015031204) si:ch211-130m23.2 (ENSSFOG00015016568) ENSSFOG00015032332 ENSSFOG00015016595 arrdc3a (ENSSFOG00015031305) #9 adgrv1 (ENSSFOG00015016679) #10 ENSSFOG00015016864 mblac2 (ENSSFOG00015016878) #14 mef2cb (ENSSFOG00015025515) #16 ccnh (ENSSFOG00015017003) #18 RASA1 (ENSSFOG00015017031) #19 ENSSFOG00015017108 cox7c (ENSSFOG00015017124) #20 EDIL3 (ENSSFOG00015017142) #22 HAPLN1 (ENSSFOG00015017192) #23 ENSSFOG00015031558 #24 TMEM167A (ENSSFOG00015030289) #26 ENSSFOG00015030000 ENSSFOG00015009338 ENSSFOG00015009357 ##33 ckmt2b (ENSSFOG00015009404) #36 rasgrf2b (ENSSFOG00015009458) #37 msh3 (ENSSFOG00015009599) dhfr (ENSSFOG00015009724) ankrd34bb (ENSSFOG00015009825) fam151b (ENSSFOG00015009848) ccdc125 (ENSSFOG00015009880) zgc:86811 (ENSSFOG00015009920) marveld2b (ENSSFOG00015009959) P. kingsleyae MODERN SPECIES 202 EDIL3 (ENSPKIG00000013774) #22 HAPLN1 (ENSPKIG00000013849) #23 ENSPKIG00000013902 #24 ENSPKIG00000013920 #24 TMEM167A (ENSPKIG00000013964) #26 ENSPKIG00000014040 ENSPKIG00000014072 ##33 ckmt2b (ENSPKIG00000014137) #36 rasgrf2b (ENSPKIG00000014205) #37 msh3 (ENSPKIG00000014339) ANKRD34B (ENSPKIG00000014386) fam151b (ENSPKIG00000014403) ccdc125 (ENSPKIG00000014452) zgc:86811 (ENSPKIG00000014514) marveld2b (ENSPKIG00000014545) oclnb (ENSPKIG00000014568) Clupeocephala ANCESTRAL SPECIES 130 ENSGT00940000167566 ENSGT00610000086112 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000263701 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b #24 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000164012.C ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a ENSGT00940000174521 ENSGT00950000182940.b.b.e Euteleosteomorpha ANCESTRAL SPECIES 32 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b #24 ENSGT00940000166544.b ENSGT00940000156102.q.a.a #24 ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C ENSGT00950000183049.E ##33 ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a Protacanthopterygii ANCESTRAL SPECIES 26 ENSGT00940000153601.a.a.e.a ENSGT00940000160987 ENSGT00940000155853.d.b ENSGT00950000183180.a.a ENSGT00940000161076 ENSGT00940000155976.b.a.a ENSGT00940000159976 ENSGT00940000170611 ENSGT00950000183047.d.f ENSGT00940000154745.a ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544.a ENSGT00390000000924 #31 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00940000161915.b ENSGT00940000155657 ENSGT00940000155864.b.c.a ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00390000005989.b.b ENSGT00940000155860.b ENSGT00940000154314.a ENSGT00390000009948.d Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 943 ENSGT00390000008634.o #18 ENSGT00940000155846.a #19 ENSGT00390000018086.a #20 ENSGT00940000158144.a.a #22 ENSGT00940000166906.e ENSGT00940000156102.q.b.d #24 Huchen MODERN SPECIES 1131 EDIL3 (ENSHHUG00000021371) #22 hapln1a (ENSHHUG00000021405) Salmoninae_a ANCESTRAL SPECIES 70 ENSGT00940000153601.a.a.e.a.b ENSGT00940000155853.d.b.d ENSGT00950000183180.a.a.o ENSGT00940000155976.b.a.a.f ENSGT00950000183047.d.f.a ENSGT01000000218408 ENSGT00940000156959.A.l.a ENSGT01040000240838.a ENSGT01040000240838.b.a ENSGT00670000098480.z ENSGT00940000157492.b.j #16 ENSGT00390000000672.a.b.w #17 ENSGT00390000008634.o #18 ENSGT00940000155846.a #19 ENSGT00390000018086.a #20 ENSGT00940000158144.a.a #22 ENSGT00940000166906.e ENSGT00940000156102.q.b.d #24 ENSGT00950000183007.b.f.g ENSGT01040000240838.b.b ENSGT00390000004985.a ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 Salmo ANCESTRAL SPECIES 58 ENSGT00390000012207.a.a.c ENSGT00940000153601.a.a.e.a.b ENSGT00940000155853.d.b.d ENSGT00950000183180.a.a.o ENSGT00940000155976.b.a.a.f ENSGT00950000183047.d.f.a ENSGT00940000156959.A.l.a ENSGT01040000240838.a ENSGT01040000240838.b.a ENSGT00670000098480.z ENSGT00940000157492.b.j #16 ENSGT00390000000672.a.b.w #17 ENSGT00390000008634.o #18 ENSGT00940000155846.a #19 ENSGT00390000018086.a #20 ENSGT00940000158144.a.a #22 ENSGT00940000166906.e ENSGT00940000156102.q.b.d #24 ENSGT00950000183007.b.f.g.a ENSGT00390000004985.a ENSGT00990000211620 ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c.h ENSGT00940000157876.f ENSGT00940000157242.a.a.b ENSGT00940000164944.h ENSGT00940000166263.i.a ENSGT00940000153352.A.i ENSGT00940000158491.a.e Atlantic salmon MODERN SPECIES 12 RAPGEF1 (ENSSSAG00000060409) med27 (ENSSSAG00000059995) ntng2 (ENSSSAG00000059962) ENSSSAG00000049134 phf19 (ENSSSAG00000048760) fibcd1 (ENSSSAG00000048747) ENSSSAG00000039962 NOE1 (ENSSSAG00000039458) ENSSSAG00000100298 ENSSSAG00000039404 mef2cb (ENSSSAG00000032249) #16 tmem161b (ENSSSAG00000103342) #17 ccnh (ENSSSAG00000031250) #18 RASA1 (ENSSSAG00000009918) #19 ENSSSAG00000115116 EDIL3 (ENSSSAG00000009561) #22 ENSSSAG00000092916 hapln1a (ENSSSAG00000009509) ENSSSAG00000121084 ENSSSAG00000095308 #24 ENSSSAG00000009292 #24 ENSSSAG00000009251 ENSSSAG00000090195 fam81b (ENSSSAG00000009202) ENSSSAG00000009183 MCTP1 (ENSSSAG00000008495) SLF1 (ENSSSAG00000008460) KIAA0825 (ENSSSAG00000008450) fam172a (ENSSSAG00000008425) nr2f1a (ENSSSAG00000008392) ENSSSAG00000008375 River trout MODERN SPECIES 39 phf19 (ENSSTUG00000007470) FIBCD1 (ENSSTUG00000007456) fnbp1a (ENSSTUG00000007174) olfm1a (ENSSTUG00000007118) ENSSTUG00000007109 ENSSTUG00000007103 ENSSTUG00000007088 mef2cb (ENSSTUG00000006634) #16 ENSSTUG00000006612 tmem161b (ENSSTUG00000006267) #17 ccnh (ENSSTUG00000006226) #18 RASA1 (ENSSTUG00000005102) #19 cox7c (ENSSTUG00000005033) #20 ENSSTUG00000005027 ENSSTUG00000005009 EDIL3 (ENSSTUG00000004155) #22 ENSSTUG00000004108 hapln1a (ENSSTUG00000004092) ENSSTUG00000004076 #24 ENSSTUG00000004059 #24 irgf1 (ENSSTUG00000004015) ENSSTUG00000004003 FAM81B (ENSSTUG00000003976) ENSSTUG00000003958 MCTP1 (ENSSTUG00000002819) SLF1 (ENSSTUG00000002746) KIAA0825 (ENSSTUG00000002603) fam172a (ENSSTUG00000017498) nr2f1a (ENSSTUG00000017416) aqp3a (ENSSTUG00000017375) ENSSTUG00000017358 Oncorhynchus ANCESTRAL SPECIES 12 ENSGT00940000153601.a.a.e.a.b ENSGT00940000155853.d.b.d ENSGT00950000183180.a.a.o ENSGT00940000155976.b.a.a.f ENSGT00950000183047.d.f.a ENSGT01000000218408 ENSGT00940000156959.A.l.a ENSGT01100000265546 ENSGT01040000240838.b.a ENSGT00670000098480.z ENSGT00940000157492.b.j #16 ENSGT00390000000672.a.b.w #17 ENSGT00390000008634.o #18 ENSGT00940000155846.a #19 ENSGT00390000018086.a #20 ENSGT00940000158144.a.a #22 ENSGT00940000166906.e ENSGT00940000156102.q.b.d #24 ENSGT00950000183007.b.f.g ENSGT01040000240838.b.b ENSGT00390000004985.a ENSGT00660000097118 ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 Rainbow trout MODERN SPECIES 2 phf19 (ENSOMYG00000010103) ENSOMYG00000009980 ENSOMYG00000009842 ENSOMYG00000071256 ENSOMYG00000009660 ENSOMYG00000009617 ENSOMYG00000073008 ENSOMYG00000055540 ENSOMYG00000009586 mef2cb (ENSOMYG00000009387) #16 tmem161b (ENSOMYG00000009002) #17 ccnh (ENSOMYG00000008859) #18 RASA1 (ENSOMYG00000008497) #19 ENSOMYG00000017501 COX7C (ENSOMYG00000007745) #20 EDIL3 (ENSOMYG00000007683) #22 ENSOMYG00000007455 ENSOMYG00000007399 #24 ENSOMYG00000071820 ENSOMYG00000063779 ENSOMYG00000007122 ENSOMYG00000007054 ENSOMYG00000072659 FAM81B (ENSOMYG00000007040) ENSOMYG00000067786 ENSOMYG00000049638 MCTP1 (ENSOMYG00000006980) SLF1 (ENSOMYG00000006870) ENSOMYG00000048823 KIAA0825 (ENSOMYG00000006716) fam172a (ENSOMYG00000006567) Oncorhynchus_a ANCESTRAL SPECIES 15 ENSGT00940000156235.c.b.c ENSGT00390000012207.a.a.c ENSGT00940000153601.a.a.e.a.b ENSGT00940000155853.d.b.d ENSGT00950000183180.a.a.o ENSGT00940000155976.b.a.a.f ENSGT00950000183047.d.f.a ENSGT01000000218408 ENSGT00940000156959.A.l.a ENSGT01100000265546 ENSGT00940000157492.b.j #16 ENSGT00390000000672.a.b.w #17 ENSGT00390000008634.o #18 ENSGT00940000155846.a #19 ENSGT00390000018086.a #20 ENSGT00940000158144.a.a #22 ENSGT00940000166906.e ENSGT00940000156102.q.b.d #24 ENSGT00950000183007.b.f.g ENSGT01040000240838.b.b ENSGT00390000004985.a ENSGT00660000097118 ENSGT00940000156031.e.g ENSGT00940000158953 ENSGT00610000086112 Coho salmon MODERN SPECIES 28 med27 (ENSOKIG00005048351) NTNG2 (ENSOKIG00005048372) DAB2IP (ENSOKIG00005048502) phf19 (ENSOKIG00005049378) FIBCD1 (ENSOKIG00005049426) fnbp1a (ENSOKIG00005049465) ENSOKIG00005049596 olfm1a (ENSOKIG00005031027) ENSOKIG00005031113 ENSOKIG00005031135 mef2cb (ENSOKIG00005031185) #16 tmem161b (ENSOKIG00005031517) #17 ccnh (ENSOKIG00005031684) #18 RASA1 (ENSOKIG00005031754) #19 cox7c (ENSOKIG00005031987) #20 EDIL3 (ENSOKIG00005032037) #22 ENSOKIG00005032330 hapln1a (ENSOKIG00005032336) ENSOKIG00005032357 #24 ENSOKIG00005032475 IRGC (ENSOKIG00005032485) ENSOKIG00005032500 FAM81B (ENSOKIG00005032506) MCTP1 (ENSOKIG00005032549) ENSOKIG00005033055 SLF1 (ENSOKIG00005033059) KIAA0825 (ENSOKIG00005033067) fam172a (ENSOKIG00005033090) nr2f1a (ENSOKIG00005033128) AQP3 (ENSOKIG00005033228) ENSOKIG00005033257 Chinook salmon MODERN SPECIES 3 ENSOTSG00005047110 SEMA3C (ENSOTSG00005047119) cd36 (ENSOTSG00005047121) ENSOTSG00005047129 phf19 (ENSOTSG00005047133) FIBCD1 (ENSOTSG00005047136) fnbp1a (ENSOTSG00005047142) ENSOTSG00005047163 olfm1a (ENSOTSG00005047164) ENSOTSG00005033015 mef2cb (ENSOTSG00005033029) #16 tmem161b (ENSOTSG00005035253) #17 ccnh (ENSOTSG00005035254) #18 RASA1 (ENSOTSG00005035259) #19 cox7c (ENSOTSG00005035400) #20 EDIL3 (ENSOTSG00005035431) #22 hapln1a (ENSOTSG00005036651) ENSOTSG00005036652 #24 ENSOTSG00005036654 ENSOTSG00005036656 FAM81B (ENSOTSG00005036657) zgc:194908 (ENSOTSG00005036659) SLF1 (ENSOTSG00005036661) KIAA0825 (ENSOTSG00005036662) ENSOTSG00005036663 fam172a (ENSOTSG00005036666) nr2f1a (ENSOTSG00005036667) aqp3a (ENSOTSG00005036697) ENSOTSG00005036698 rhobtb4 (ENSOTSG00005036699) ENSOTSG00005037153 Salmoninae ANCESTRAL SPECIES 253 ENSGT00940000157492.b.i #16 ENSGT00390000000672.a.b.x #17 ENSGT00390000008634.p #18 ENSGT00940000155846.b #19 ENSGT00390000018086.b #20 ENSGT00940000158144.a.b #22 ENSGT00940000166906.f ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b.c #24 ENSGT00940000166544.b ENSGT00940000155186.j #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C ENSGT00390000016407 ENSGT00940000163496.b.a ENSGT00660000097118 ENSGT00940000156031.e.h ENSGT00530000063907.c.g.a.b ENSGT00940000165983 Salmoninae_a ANCESTRAL SPECIES 10 ENSGT00940000155853.d.b.c ENSGT00950000183180.a.a.p ENSGT00940000161076 ENSGT00940000155976.b.a.a.e ENSGT00940000159976 ENSGT00940000170611 ENSGT00950000183047.d.f.b ENSGT00940000154745.a ENSGT00940000156959.A.l.b ENSGT00940000159789.t ENSGT00940000157492.b.i #16 ENSGT00390000000672.a.b.x #17 ENSGT00390000008634.p #18 ENSGT00940000155846.b #19 ENSGT00390000018086.b #20 ENSGT00940000158144.a.b #22 ENSGT00940000166906.f ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b.c #24 ENSGT00940000166544.b ENSGT00940000155186.j #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C ENSGT00390000016407 ENSGT00940000163496.b.a ENSGT00660000097118 ENSGT00940000156031.e.h ENSGT00530000063907.c.g.a.b ENSGT00530000063907.c.h Oncorhynchus ANCESTRAL SPECIES 58 ENSGT00940000153246.b ENSGT00390000012207.a.a.d ENSGT00940000153601.a.a.e.a.a ENSGT00940000160987 ENSGT00940000155853.d.b.c ENSGT00950000183180.a.a.p ENSGT00940000161076 ENSGT00940000155976.b.a.a.e ENSGT00940000159976 ENSGT00390000018038 ENSGT00940000157492.b.i #16 ENSGT00390000000672.a.b.x #17 ENSGT00390000008634.p #18 ENSGT00940000155846.b #19 ENSGT00390000018086.b #20 ENSGT00940000158144.a.b #22 ENSGT00940000156102.q.b.c #24 ENSGT00940000166544.b ENSGT00940000155186.j #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C ENSGT00390000016407 ENSGT00940000163496.b.a ENSGT01060000248830.a.a.a.a.a.a ENSGT00940000156031.e.h ENSGT00530000063907.c.g.a.b ENSGT00940000157876.e.b ENSGT00530000063907.c.h ENSGT00940000157876.f Oncorhynchus_a ANCESTRAL SPECIES 61 ENSGT00940000156235.c.b.d ENSGT00390000012207.a.a.d ENSGT00940000153601.a.a.e.a.a ENSGT00940000160987 ENSGT00940000155853.d.b.c ENSGT00950000183180.a.a.p ENSGT00940000161076 ENSGT00940000155976.b.a.a.e ENSGT00940000159976 ENSGT00390000018038 ENSGT00940000157492.b.i #16 ENSGT00390000000672.a.b.x #17 ENSGT00390000008634.p #18 ENSGT00940000155846.b #19 ENSGT00390000018086.b #20 ENSGT00940000158144.a.b #22 ENSGT00940000156102.q.b.c #24 ENSGT00940000166544.b ENSGT00940000155186.j #26 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C ENSGT00390000016407 ENSGT00940000163496.b.a ENSGT01060000248830.a.a.a.a.a.a ENSGT00940000156031.e.h ENSGT00530000063907.c.g.a.b ENSGT00940000157876.e.b ENSGT00530000063907.c.h ENSGT00940000157876.f ENSGT00940000157242.a.a.b Chinook salmon MODERN SPECIES 28 ENSOTSG00005016446 #10 arrdc3a (ENSOTSG00005016445) #9 gkap1 (ENSOTSG00005016439) UBQLN1 (ENSOTSG00005016436) IDNK (ENSOTSG00005016434) FRMD3 (ENSOTSG00005016430) RASEF (ENSOTSG00005016424) ENSOTSG00005015165 mapkapk5 (ENSOTSG00005015054) atxn2 (ENSOTSG00005015052) mef2cb (ENSOTSG00005015048) #16 tmem161b (ENSOTSG00005015029) #17 ccnh (ENSOTSG00005015023) #18 RASA1 (ENSOTSG00005010628) #19 cox7c (ENSOTSG00005010611) #20 EDIL3 (ENSOTSG00005010610) #22 HAPLN1 (ENSOTSG00005010609) #23 ENSOTSG00005010608 #24 xrcc4 (ENSOTSG00005010606) TMEM167A (ENSOTSG00005010604) #26 ENSOTSG00005010603 ENSOTSG00005010602 ENSOTSG00005010601 SKIC3 (ENSOTSG00005010594) gig2p (ENSOTSG00005010592) MCTP1 (ENSOTSG00005010590) ENSOTSG00005010589 ENSOTSG00005010588 fam172a (ENSOTSG00005010585) ENSOTSG00005010583 ENSOTSG00005010582 Coho salmon MODERN SPECIES 22 FIBCD1 (ENSOKIG00005002441) SLC2A6 (ENSOKIG00005002423) ENSOKIG00005002390 FNBP1 (ENSOKIG00005002121) si:ch211-248e11.2 (ENSOKIG00005001999) ENSOKIG00005001961 ENSOKIG00005001820 ENSOKIG00005001790 mef2cb (ENSOKIG00005001781) #16 tmem161b (ENSOKIG00005001756) #17 ccnh (ENSOKIG00005001741) #18 RASA1 (ENSOKIG00005001658) #19 ENSOKIG00005001608 COX7C (ENSOKIG00005001602) #20 ENSOKIG00005001598 EDIL3 (ENSOKIG00005001579) #22 HAPLN1 (ENSOKIG00005001572) #23 ENSOKIG00005001562 #24 ENSOKIG00005001561 ENSOKIG00005001556 TMEM167A (ENSOKIG00005001553) #26 ENSOKIG00005001549 ENSOKIG00005001546 ENSOKIG00005001543 SKIC3 (ENSOKIG00005001473) gig2p (ENSOKIG00005001415) ENSOKIG00005001410 MCTP1 (ENSOKIG00005001198) ENSOKIG00005001109 ENSOKIG00005001041 nr2f1a (ENSOKIG00005001020) Rainbow trout MODERN SPECIES 27 phf19 (ENSOMYG00000001306) ENSOMYG00000070167 traf1 (ENSOMYG00000001227) ENSOMYG00000042070 ENSOMYG00000042045 ENSOMYG00000041837 ENSOMYG00000041799 ENSOMYG00000041784 ENSOMYG00000041403 ENSOMYG00000020726 mef2cb (ENSOMYG00000041252) #16 tmem161b (ENSOMYG00000041228) #17 ccnh (ENSOMYG00000041216) #18 RASA1 (ENSOMYG00000037530) #19 COX7C (ENSOMYG00000068821) #20 EDIL3 (ENSOMYG00000037063) #22 HAPLN1 (ENSOMYG00000036994) #23 ENSOMYG00000036961 #24 ENSOMYG00000036933 TMEM167A (ENSOMYG00000036913) #26 ENSOMYG00000036899 ENSOMYG00000036883 ENSOMYG00000059198 ENSOMYG00000036849 ENSOMYG00000060754 ENSOMYG00000036792 ENSOMYG00000036699 ENSOMYG00000055463 ENSOMYG00000036570 ENSOMYG00000061650 ENSOMYG00000036448 Salmo ANCESTRAL SPECIES ENSGT00940000155853.d.b.c ENSGT00950000183180.a.a.p ENSGT00940000161076 ENSGT00940000155976.b.a.a.e ENSGT00940000159976 ENSGT00940000170611 ENSGT00950000183047.d.f.b ENSGT00940000154745.a ENSGT00940000156959.A.l.b ENSGT00940000159789.t ENSGT00940000157492.b.i #16 ENSGT00390000000672.a.b.x #17 ENSGT00390000008634.p #18 ENSGT00940000155846.b #19 ENSGT00390000018086.b #20 ENSGT00940000158144.a.b #22 ENSGT00940000166906.f ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b.c #24 ENSGT00940000166544.b ENSGT00940000155186.j #26 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C ENSGT00390000016407 ENSGT00940000163496.b.a ENSGT00660000097118 ENSGT00940000156031.e.h ENSGT00530000063907.c.g.b ENSGT00940000157876.e ENSGT00940000164012.A.g Atlantic salmon MODERN SPECIES 16 phf19 (ENSSSAG00000065521) traf1 (ENSSSAG00000065546) ENSSSAG00000091162 ENSSSAG00000092470 ENSSSAG00000065605 ENSSSAG00000065674 ENSSSAG00000065708 cssa24h9orf116 (ENSSSAG00000066519) olfm1 (ENSSSAG00000066530) rxra (ENSSSAG00000066548) mef2cb (ENSSSAG00000066626) #16 tmem161b (ENSSSAG00000107181) #17 ccnh (ENSSSAG00000121523) #18 RASA1 (ENSSSAG00000068355) #19 COX7C (ENSSSAG00000072903) #20 EDIL3 (ENSSSAG00000072918) #22 ENSSSAG00000093421 ENSSSAG00000072968 #24 ENSSSAG00000072995 TMEM167A (ENSSSAG00000106471) #26 ENSSSAG00000084920 ENSSSAG00000096838 ENSSSAG00000073082 ENSSSAG00000074688 zgc:194908 (ENSSSAG00000106005) ENSSSAG00000074711 ENSSSAG00000089739 fam172a (ENSSSAG00000074769) ENSSSAG00000089581 ENSSSAG00000117500 ENSSSAG00000085177 River trout MODERN SPECIES 19 phf19 (ENSSTUG00000035545) traf1 (ENSSTUG00000035612) FIBCD1 (ENSSTUG00000035619) SLC2A6 (ENSSTUG00000035628) ENSSTUG00000035642 fnbp1a (ENSSTUG00000035702) si:ch211-248e11.2 (ENSSTUG00000036131) olfm1a (ENSSTUG00000036142) ENSSTUG00000036175 mef2cb (ENSSTUG00000036286) #16 tmem161b (ENSSTUG00000036506) #17 ENSSTUG00000036590 ccnh (ENSSTUG00000036596) #18 RASA1 (ENSSTUG00000036727) #19 cox7c (ENSSTUG00000040824) #20 EDIL3 (ENSSTUG00000040836) #22 HAPLN1 (ENSSTUG00000040931) #23 ENSSTUG00000040941 #24 ENSSTUG00000041014 #24 ENSSTUG00000041051 TMEM167A (ENSSTUG00000041062) #26 ENSSTUG00000041094 ENSSTUG00000041138 zgc:110626 (ENSSTUG00000041162) SKIC3 (ENSSTUG00000041193) gig2p (ENSSTUG00000041462) MCTP1 (ENSSTUG00000041521) ENSSTUG00000043018 fam172a (ENSSTUG00000043063) nr2f1a (ENSSTUG00000043412) ENSSTUG00000043503 Huchen MODERN SPECIES 2647 EDIL3 (ENSHHUG00000025859) #22 Northern pike MODERN SPECIES 12 endog (ENSELUG00000015964) DAB2IP (ENSELUG00000016051) phf19 (ENSELUG00000000604) traf1 (ENSELUG00000016128) FIBCD1 (ENSELUG00000016156) SLC2A6 (ENSELUG00000016201) fnbp1a (ENSELUG00000016272) lg13h9orf116 (ENSELUG00000028330) olfm1a (ENSELUG00000016325) ENSELUG00000016364 mef2cb (ENSELUG00000016439) #16 tmem161b (ENSELUG00000016532) #17 ccnh (ENSELUG00000016575) #18 RASA1 (ENSELUG00000016793) #19 cox7c (ENSELUG00000016842) #20 EDIL3 (ENSELUG00000016915) #22 HAPLN1 (ENSELUG00000016967) #23 ENSELUG00000017037 #24 ENSELUG00000017082 TMEM167A (ENSELUG00000017116) #26 ENSELUG00000017125 ENSELUG00000017136 ENSELUG00000000647 zgc:110626 (ENSELUG00000017159) ENSELUG00000031559 SKIC3 (ENSELUG00000000666) gig2p (ENSELUG00000017477) MCTP1 (ENSELUG00000017521) ENSELUG00000017534 KIAA0825 (ENSELUG00000017598) fam172a (ENSELUG00000017647) Acanthomorphata ANCESTRAL SPECIES 29 ENSGT00940000164012.A ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT01030000240301 ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000167385 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a Euacanthomorphacea ANCESTRAL SPECIES 14 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a ENSGT00940000174521 Percomorphaceae ANCESTRAL SPECIES 2 ENSGT00940000164012.A.i ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a Tiger tail seahorse MODERN SPECIES 270 ccnh (ENSHCOG00000017060) #18 RASA1 (ENSHCOG00000017107) #19 cox7c (ENSHCOG00000017118) #20 EDIL3 (ENSHCOG00000017169) #22 hapln1a (ENSHCOG00000017205) ENSHCOG00000017247 #24 ENSHCOG00000017256 tmem167a (ENSHCOG00000017265) #26 ENSHCOG00000017303 ENSHCOG00000017368 ENSHCOG00000017380 ENSHCOG00000017421 ENSHCOG00000017448 ENSHCOG00000017462 GNA14 (ENSHCOG00000017473) ENSHCOG00000017497 tfa (ENSHCOG00000017505) wdr31 (ENSHCOG00000017528) bri3bp (ENSHCOG00000017539) Percomorphaceae_B ANCESTRAL SPECIES 7 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000167385 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000165930.B ENSGT01100000264020 ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e Ovalentaria ANCESTRAL SPECIES 4 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000164012.C.i.a ENSGT00940000165930.B ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Ovalentaria_B ANCESTRAL SPECIES 9 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Pomacentridae ANCESTRAL SPECIES ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b.e ENSGT00940000164012.C.i.b.f ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Pomacentridae_A ANCESTRAL SPECIES 1 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b.e ENSGT00940000164012.C.i.b.f ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Amphiprion ANCESTRAL SPECIES 10 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619.o ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b.e ENSGT00940000164012.C.i.b.f ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Orange clownfish MODERN SPECIES 19 ENSAPEG00000017633 ENSAPEG00000017654 aqp3a (ENSAPEG00000017666) nol6 (ENSAPEG00000017733) ENSAPEG00000018094 ENSAPEG00000018106 ENSAPEG00000018112 wdr54 (ENSAPEG00000018143) rhobtb4 (ENSAPEG00000018250) ENSAPEG00000018272 mef2cb (ENSAPEG00000018311) #16 tmem161b (ENSAPEG00000018387) #17 ccnh (ENSAPEG00000018429) #18 RASA1 (ENSAPEG00000018456) #19 cox7c (ENSAPEG00000018515) #20 EDIL3 (ENSAPEG00000018562) #22 hapln1a (ENSAPEG00000018597) ENSAPEG00000018625 #24 ENSAPEG00000018692 tmem167a (ENSAPEG00000018721) #26 ENSAPEG00000018730 ENSAPEG00000018737 zgc:110353 (ENSAPEG00000018774) ENSAPEG00000018784 ENSAPEG00000018839 ENSAPEG00000018859 ENSAPEG00000018877 ssbp2a (ENSAPEG00000018983) ##33 ENSAPEG00000019036 ENSAPEG00000019067 iqgap2 (ENSAPEG00000019086) Clown anemonefish MODERN SPECIES 2024 EDIL3 (ENSAOCG00000008995) #22 Spiny chromis MODERN SPECIES 8 ENSAPOG00000002183 ENSAPOG00000002177 ENSAPOG00000002167 aqp3a (ENSAPOG00000002152) nol6 (ENSAPOG00000002135) ENSAPOG00000002103 ENSAPOG00000000043 wdr54 (ENSAPOG00000002088) rhobtb4 (ENSAPOG00000002074) ENSAPOG00000002045 mef2cb (ENSAPOG00000002027) #16 tmem161b (ENSAPOG00000001998) #17 ccnh (ENSAPOG00000001970) #18 RASA1 (ENSAPOG00000001947) #19 cox7c (ENSAPOG00000001906) #20 EDIL3 (ENSAPOG00000001900) #22 hapln1a (ENSAPOG00000001887) ENSAPOG00000001864 #24 ENSAPOG00000001838 tmem167a (ENSAPOG00000001827) #26 ENSAPOG00000001813 ENSAPOG00000001805 ENSAPOG00000001777 ENSAPOG00000001766 ENSAPOG00000001750 ENSAPOG00000001735 ENSAPOG00000001726 ssbp2a (ENSAPOG00000000027) ##33 ENSAPOG00000024371 f2r (ENSAPOG00000024353) iqgap2 (ENSAPOG00000024338) Bicolor damselfish MODERN SPECIES 640 mef2cb (ENSSPAG00000000918) #16 tmem161b (ENSSPAG00000001019) #17 ccnh (ENSSPAG00000001077) #18 RASA1 (ENSSPAG00000001096) #19 cox7c (ENSSPAG00000001197) #20 ENSSPAG00000001211 EDIL3 (ENSSPAG00000001226) #22 Cichlidae ANCESTRAL SPECIES 6 ENSGT00940000164012.A.i ENSGT00940000164012.A.j.c.a ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Pseudocrenilabrinae ANCESTRAL SPECIES 11 ENSGT00940000182583 ENSGT00940000164012.A.j.d ENSGT00940000164012.A.j.c.a.a.b ENSGT00940000157242.a.a.e ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.j ENSGT00940000165930.B.i ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b.d ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 8 ENSGT00940000182583 ENSGT00940000164012.A.j.d ENSGT00940000164012.A.j.c.a.a.b ENSGT00940000157242.a.a.e ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.j ENSGT00940000165930.B.i ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b.d ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Haplochromini ANCESTRAL SPECIES 4 ENSGT00940000164012.A.j.d.a ENSGT00940000164012.A.j.d.b ENSGT00940000164012.A.j.c.a.a.b ENSGT00940000157242.a.a.e ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.j ENSGT00940000165930.B.i ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b.d ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Haplochromini_A ANCESTRAL SPECIES 4 ENSGT00940000182583 ENSGT00940000164012.A.j.d.a ENSGT00940000164012.A.j.c.a.a.b ENSGT00940000157242.a.a.e ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.j ENSGT00940000165930.B.i ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b.d ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b P. nyererei MODERN SPECIES 301 ENSPNYG00000020946 ENSPNYG00000020935 ENSPNYG00000020922 ENSPNYG00000020908 aqp3a (ENSPNYG00000020898) ENSPNYG00000020884 nol6 (ENSPNYG00000020726) wdr54 (ENSPNYG00000020667) rhobtb4 (ENSPNYG00000020621) ENSPNYG00000020584 mef2cb (ENSPNYG00000020527) #16 tmem161b (ENSPNYG00000020473) #17 ccnh (ENSPNYG00000020440) #18 RASA1 (ENSPNYG00000020376) #19 cox7c (ENSPNYG00000020360) #20 EDIL3 (ENSPNYG00000020312) #22 hapln1a (ENSPNYG00000020301) ENSPNYG00000020287 ENSPNYG00000020261 #24 ENSPNYG00000020225 tmem167a (ENSPNYG00000020201) #26 ENSPNYG00000020193 ENSPNYG00000020182 zgc:110353 (ENSPNYG00000020171) zgc:110626 (ENSPNYG00000020139) ENSPNYG00000020101 ssbp2a (ENSPNYG00000020062) ##33 ENSPNYG00000020035 ENSPNYG00000020027 f2r (ENSPNYG00000020014) F2RL2 (ENSPNYG00000020000) Haplochromini_B ANCESTRAL SPECIES 2 ENSGT00940000164012.A.j.c.b ENSGT00940000164012.A.j.d.a ENSGT00940000164012.A.j.c.a.a.b ENSGT00940000157242.a.a.e ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.j ENSGT00940000165930.B.i ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b.d ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Eastern happy MODERN SPECIES 3 ENSACLG00000006209 aqp3a (ENSACLG00000006193) ENSACLG00000006184 ENSACLG00000006182 nol6 (ENSACLG00000006141) wdr54 (ENSACLG00000006131) rhobtb4 (ENSACLG00000006053) ENSACLG00000005737 mef2cb (ENSACLG00000005626) #16 tmem161b (ENSACLG00000005596) #17 ccnh (ENSACLG00000005566) #18 RASA1 (ENSACLG00000005501) #19 ENSACLG00000005496 ENSACLG00000005490 ENSACLG00000005017 EDIL3 (ENSACLG00000005008) #22 hapln1a (ENSACLG00000004973) ENSACLG00000004948 #24 ENSACLG00000004939 #24 ENSACLG00000004904 ENSACLG00000004901 tmem167a (ENSACLG00000004895) #26 ENSACLG00000004888 ENSACLG00000004880 zgc:110353 (ENSACLG00000004869) ENSACLG00000004856 ENSACLG00000004809 ENSACLG00000004784 ENSACLG00000004738 ssbp2a (ENSACLG00000004665) ##33 ENSACLG00000004622 Zebra mbuna MODERN SPECIES 1094 ENSMZEG00005013993 aqp3a (ENSMZEG00005014023) ENSMZEG00005014030 ENSMZEG00005014044 aqp3a (ENSMZEG00005014052) nol6 (ENSMZEG00005014058) ENSMZEG00005014079 wdr54 (ENSMZEG00005014089) rhobtb4 (ENSMZEG00005014106) ENSMZEG00005014149 mef2cb (ENSMZEG00005014179) #16 tmem161b (ENSMZEG00005014489) #17 ccnh (ENSMZEG00005014502) #18 RASA1 (ENSMZEG00005014524) #19 cox7c (ENSMZEG00005014575) #20 EDIL3 (ENSMZEG00005014589) #22 hapln1a (ENSMZEG00005014602) ENSMZEG00005014607 #24 ENSMZEG00005014615 #24 ENSMZEG00005014624 tmem167a (ENSMZEG00005014638) #26 ENSMZEG00005014667 ENSMZEG00005014670 ENSMZEG00005014675 ENSMZEG00005014699 zgc:110626 (ENSMZEG00005014751) ENSMZEG00005014783 ENSMZEG00005014856 ssbp2a (ENSMZEG00005014904) ##33 ENSMZEG00005014936 ENSMZEG00005014951 Burton s mouthbrooder MODERN SPECIES 321 aqp3a (ENSHBUG00000010175) ENSHBUG00000010151 ENSHBUG00000010122 ENSHBUG00000010109 aqp3a (ENSHBUG00000010083) nol6 (ENSHBUG00000010058) ENSHBUG00000010025 wdr54 (ENSHBUG00000010004) rhobtb4 (ENSHBUG00000009988) ENSHBUG00000009961 mef2cb (ENSHBUG00000009943) #16 tmem161b (ENSHBUG00000009875) #17 ccnh (ENSHBUG00000009831) #18 RASA1 (ENSHBUG00000009789) #19 cox7c (ENSHBUG00000009664) #20 EDIL3 (ENSHBUG00000009646) #22 hapln1a (ENSHBUG00000009630) ENSHBUG00000009620 #24 ENSHBUG00000009595 #24 ENSHBUG00000009573 tmem167a (ENSHBUG00000009520) #26 ENSHBUG00000009499 ENSHBUG00000009491 zgc:110353 (ENSHBUG00000009481) ENSHBUG00000009460 ENSHBUG00000009436 ssbp2a (ENSHBUG00000009411) ##33 ENSHBUG00000009343 ENSHBUG00000009322 ENSHBUG00000009306 f2r (ENSHBUG00000009285) Lyretail cichlid MODERN SPECIES 296 ENSNBRG00000001175 ENSNBRG00000001202 aqp3a (ENSNBRG00000001309) ENSNBRG00000001338 aqp3a (ENSNBRG00000001362) nol6 (ENSNBRG00000001435) ENSNBRG00000001707 wdr54 (ENSNBRG00000001735) rhobtb4 (ENSNBRG00000001822) ENSNBRG00000001877 mef2cb (ENSNBRG00000001927) #16 tmem161b (ENSNBRG00000002015) #17 ccnh (ENSNBRG00000002050) #18 RASA1 (ENSNBRG00000002080) #19 cox7c (ENSNBRG00000002151) #20 EDIL3 (ENSNBRG00000002173) #22 hapln1a (ENSNBRG00000002240) ENSNBRG00000002283 #24 ENSNBRG00000002303 #24 ENSNBRG00000002324 tmem167a (ENSNBRG00000002358) #26 ENSNBRG00000002393 ENSNBRG00000002394 zgc:110353 (ENSNBRG00000002407) ENSNBRG00000002430 ENSNBRG00000002459 ENSNBRG00000002487 ENSNBRG00000002520 ENSNBRG00000002562 ##33 ENSNBRG00000002575 ENSNBRG00000002601 ##33 Nile tilapia MODERN SPECIES 3 ENSONIG00000032994 ENSONIG00000015961 aqp3a (ENSONIG00000015957) nol6 (ENSONIG00000015951) ENSONIG00000037922 ENSONIG00000015956 wdr54 (ENSONIG00000015949) rhobtb4 (ENSONIG00000015947) ENSONIG00000015944 mef2cb (ENSONIG00000015941) #16 tmem161b (ENSONIG00000015938) #17 ccnh (ENSONIG00000015937) #18 RASA1 (ENSONIG00000015926) #19 cox7c (ENSONIG00000034802) #20 ENSONIG00000027791 EDIL3 (ENSONIG00000015924) #22 hapln1a (ENSONIG00000015922) ENSONIG00000015920 #24 ENSONIG00000015918 tmem167a (ENSONIG00000028217) #26 ENSONIG00000028822 ENSONIG00000035172 ENSONIG00000015915 ENSONIG00000041466 ENSONIG00000028275 ENSONIG00000031589 ENSONIG00000034532 ssbp2a (ENSONIG00000035570) ##33 ENSONIG00000032779 ENSONIG00000027834 ENSONIG00000035839 Midas cichlid MODERN SPECIES 19 EDIL3 (ENSACIG00000007283) #22 hapln1a (ENSACIG00000007248) ENSACIG00000007229 #24 Atherinomorphae ANCESTRAL SPECIES 1 ENSGT00940000164012.A.i ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.h ENSGT00940000164012.C.i.a ENSGT00940000165930.B.g ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Cyprinodontiformes ANCESTRAL SPECIES 1 ENSGT00940000164012.A.i ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.h ENSGT00940000164012.C.i.a ENSGT00940000165930.B.g ENSGT01100000264020 ENSGT00940000178644 ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Aplocheiloidei ANCESTRAL SPECIES 20 ENSGT00940000164012.A.i ENSGT00940000164012.A.j.a ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 Mangrove rivulus MODERN SPECIES 106 ENSKMAG00000004611 ENSKMAG00000004630 ENSKMAG00000004656 ENSKMAG00000004666 aqp3a (ENSKMAG00000004684) nol6 (ENSKMAG00000004749) ENSKMAG00000004870 ENSKMAG00000004885 rhobtb4 (ENSKMAG00000004926) ENSKMAG00000005038 mef2cb (ENSKMAG00000005063) #16 tmem161b (ENSKMAG00000005177) #17 ccnh (ENSKMAG00000005212) #18 RASA1 (ENSKMAG00000005251) #19 cox7c (ENSKMAG00000005280) #20 EDIL3 (ENSKMAG00000005304) #22 hapln1a (ENSKMAG00000005336) Turquoise killifish MODERN SPECIES 1627 ENSNFUG00015019976 ENSNFUG00015019987 Nfu_g_1_009030 (ENSNFUG00015019996) aqp3a (ENSNFUG00015020010) NOL6 (ENSNFUG00015020059) ENSNFUG00015020277 ENSNFUG00015020285 wdr54 (ENSNFUG00015020289) rhobtb4 (ENSNFUG00015020311) ENSNFUG00015020339 mef2cb (ENSNFUG00015020367) #16 TMEM161B (ENSNFUG00015020490) #17 CCNH (ENSNFUG00015020508) #18 RASA1 (ENSNFUG00015020594) #19 cox7c (ENSNFUG00015022752) #20 EDIL3B (ENSNFUG00015022777) #22 ENSNFUG00015023085 ENSNFUG00015023089 ENSNFUG00015014061 #24 ENSNFUG00015014068 tmem167a (ENSNFUG00015014079) #26 ENSNFUG00015014089 ENSNFUG00015014101 ENSNFUG00015014113 ENSNFUG00015014139 zgc:110626 (ENSNFUG00015014153) SSBP2 (ENSNFUG00015014251) ##33 Nfu_g_1_009468 (ENSNFUG00015014441) OLA.20275 (ENSNFUG00015014455) F2R (ENSNFUG00015014465) IQGAP2 (ENSNFUG00015014565) Cyprinodontoidei ANCESTRAL SPECIES 1 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.h ENSGT00940000164012.C.i.a.n ENSGT00940000165930.B.g ENSGT01100000264020 ENSGT00940000164012.C.i.a.m ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a.a Poeciliinae ANCESTRAL SPECIES 5 ENSGT00940000164012.A.i ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.h ENSGT00940000164012.C.i.a.n ENSGT00940000165930.B.g ENSGT01100000264020 ENSGT00940000164012.C.i.a.m ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a.a Poecilia ANCESTRAL SPECIES 3 ENSGT00940000164012.A.i ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.h ENSGT00940000164012.C.i.a.n ENSGT00940000165930.B.g ENSGT01100000264020 ENSGT00940000164012.C.i.a.m ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a.a ENSGT00510000050125.b.a.a.b ENSGT00510000050125.b.a.b NAME_6 ANCESTRAL SPECIES 9 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634.n #18 ENSGT00390000008634.m #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 Amazon molly MODERN SPECIES 257 ENSPFOG00000004438 aqp3a (ENSPFOG00000004339) ENSPFOG00000004334 nol6 (ENSPFOG00000003825) wdr54 (ENSPFOG00000003732) rhobtb4 (ENSPFOG00000003637) rhobtb4 (ENSPFOG00000003440) ENSPFOG00000003295 mef2cb (ENSPFOG00000003230) #16 ENSPFOG00000020336 tmem161b (ENSPFOG00000003000) #17 ccnh (ENSPFOG00000002947) #18 ccnh (ENSPFOG00000002746) #18 RASA1 (ENSPFOG00000002347) #19 cox7c (ENSPFOG00000002316) #20 EDIL3 (ENSPFOG00000002185) #22 hapln1a (ENSPFOG00000002114) ENSPFOG00000001846 #24 tmem167a (ENSPFOG00000001752) #26 ENSPFOG00000001744 ENSPFOG00000023640 ENSPFOG00000001705 Sailfin molly MODERN SPECIES 1931 EDIL3 (ENSPLAG00000011457) #22 Guppy MODERN SPECIES 461 nr2f1a (ENSPREG00000004976) ENSPREG00000004947 ENSPREG00000004907 aqp3a (ENSPREG00000004869) ENSPREG00000004850 ENSPREG00000004845 nol6 (ENSPREG00000004807) wdr54 (ENSPREG00000004773) rhobtb4 (ENSPREG00000004711) ENSPREG00000004666 mef2cb (ENSPREG00000004581) #16 tmem161b (ENSPREG00000004456) #17 ccnh (ENSPREG00000004416) #18 RASA1 (ENSPREG00000004344) #19 cox7c (ENSPREG00000004324) #20 EDIL3 (ENSPREG00000004288) #22 hapln1a (ENSPREG00000004256) ENSPREG00000004230 #24 ENSPREG00000004208 #24 ENSPREG00000004192 tmem167a (ENSPREG00000004173) #26 ENSPREG00000004162 ENSPREG00000004147 ENSPREG00000004131 ENSPREG00000004116 ENSPREG00000004089 ENSPREG00000004065 ssbp2a (ENSPREG00000003987) ##33 ENSPREG00000003968 ENSPREG00000003945 ENSPREG00000003937 Platyfish MODERN SPECIES 3 ENSXMAG00000005344 ENSXMAG00000023380 aqp3a (ENSXMAG00000019407) ENSXMAG00000021334 ENSXMAG00000019410 nol6 (ENSXMAG00000019408) wdr54 (ENSXMAG00000019411) rhobtb4 (ENSXMAG00000019412) ENSXMAG00000026131 ENSXMAG00000021270 mef2cb (ENSXMAG00000019414) #16 tmem161b (ENSXMAG00000019415) #17 ccnh (ENSXMAG00000024700) #18 RASA1 (ENSXMAG00000019416) #19 cox7c (ENSXMAG00000019418) #20 EDIL3 (ENSXMAG00000025625) #22 ENSXMAG00000022930 hapln1a (ENSXMAG00000024296) ENSXMAG00000008743 #24 ENSXMAG00000024568 #24 ENSXMAG00000025960 tmem167a (ENSXMAG00000027342) #26 ENSXMAG00000029021 ENSXMAG00000020919 ENSXMAG00000023025 ENSXMAG00000006755 zgc:110626 (ENSXMAG00000006771) ENSXMAG00000021171 ssbp2a (ENSXMAG00000006775) ##33 ENSXMAG00000023825 ENSXMAG00000029905 NAME_4 ANCESTRAL SPECIES 13 ENSGT00940000164012.A.i ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018619 ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.h ENSGT00940000164012.C.i.a.n ENSGT00940000165930.B.g ENSGT01100000264020 ENSGT00940000164012.C.i.a.m ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a.a ENSGT00510000050125.b.a.a.b Mummichog MODERN SPECIES 2186 ENSFHEG00000007897 ENSFHEG00000007865 aqp3 (ENSFHEG00000007836) nol6 (ENSFHEG00000007788) CARTPT (ENSFHEG00000007768) ENSFHEG00000007736 ENSFHEG00000007734 wdr54 (ENSFHEG00000007730) rhobtb4 (ENSFHEG00000007689) ENSFHEG00000007669 mef2cb (ENSFHEG00000007641) #16 tmem161b (ENSFHEG00000007540) #17 ccnh (ENSFHEG00000007498) #18 RASA1 (ENSFHEG00000007467) #19 cox7c (ENSFHEG00000007348) #20 EDIL3 (ENSFHEG00000007331) #22 hapln1a (ENSFHEG00000007303) ENSFHEG00000007286 #24 ENSFHEG00000007222 tmem167a (ENSFHEG00000007183) #26 ENSFHEG00000007163 ENSFHEG00000007150 ENSFHEG00000007124 ENSFHEG00000007076 ENSFHEG00000007069 ENSFHEG00000007053 ENSFHEG00000006978 ssbp2a (ENSFHEG00000006960) ##33 ENSFHEG00000006892 ENSFHEG00000006888 ENSFHEG00000006882 Sheepshead minnow MODERN SPECIES 215 rhobtb4 (ENSCVAG00000021493) ENSCVAG00000000692 mef2cb (ENSCVAG00000021608) #16 tmem161b (ENSCVAG00000021674) #17 ccnh (ENSCVAG00000021711) #18 RASA1 (ENSCVAG00000021727) #19 cox7c (ENSCVAG00000021739) #20 EDIL3 (ENSCVAG00000021750) #22 hapln1a (ENSCVAG00000021762) ENSCVAG00000021793 #24 ENSCVAG00000021807 tmem167a (ENSCVAG00000021817) #26 ENSCVAG00000021823 ENSCVAG00000021833 ENSCVAG00000021851 ENSCVAG00000021860 zgc:110353 (ENSCVAG00000021876) ENSCVAG00000021888 zgc:110626 (ENSCVAG00000021907) ssbp2a (ENSCVAG00000021963) ##33 ENSCVAG00000021973 ENSCVAG00000021982 ENSCVAG00000021992 Oryzias ANCESTRAL SPECIES 7 ENSGT00940000157876 ENSGT00940000164012.A.i ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000155779.b.b ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000164012.C.i.a.o ENSGT00940000165930.B.g ENSGT00940000164012.C.i.a.p ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Oryzias_b ANCESTRAL SPECIES 6 ENSGT00940000164012.A.i.c ENSGT00940000164012.A.i.d.a ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000155779.b.b ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000164012.C.i.a.o ENSGT00940000165930.B.g ENSGT00940000164012.C.i.a.p ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Indian medaka MODERN SPECIES 11 ENSOMEG00000006945 ENSOMEG00000006925 aqp3a (ENSOMEG00000006914) nol6 (ENSOMEG00000006877) ENSOMEG00000006829 ENSOMEG00000006780 wdr54 (ENSOMEG00000006605) rhobtb4 (ENSOMEG00000006579) ENSOMEG00000006514 mef2cb (ENSOMEG00000006457) #16 tmem161b (ENSOMEG00000006400) #17 ccnh (ENSOMEG00000006283) #18 RASA1 (ENSOMEG00000006347) #19 ENSOMEG00000006252 cox7c (ENSOMEG00000006244) #20 EDIL3 (ENSOMEG00000006226) #22 hapln1a (ENSOMEG00000006182) ENSOMEG00000006164 #24 TAAR1 (ENSOMEG00000006144) ENSOMEG00000006134 tmem167a (ENSOMEG00000000141) #26 ENSOMEG00000006046 ENSOMEG00000006034 ENSOMEG00000006013 ENSOMEG00000005993 ENSOMEG00000005955 ENSOMEG00000005927 ENSOMEG00000005916 ssbp2a (ENSOMEG00000005892) ##33 ENSOMEG00000005811 ENSOMEG00000005752 Javanese ricefish MODERN SPECIES 23 ENSOJAG00000000985 ENSOJAG00000000976 ENSOJAG00000000965 aqp3a (ENSOJAG00000000956) ENSOJAG00000000950 nol6 (ENSOJAG00000000828) ENSOJAG00000000743 ENSOJAG00000000702 ENSOJAG00000000694 wdr54 (ENSOJAG00000000673) rhobtb4 (ENSOJAG00000000526) ENSOJAG00000000447 mef2cb (ENSOJAG00000000351) #16 ccnh (ENSOJAG00000000211) #18 cox7c (ENSOJAG00000000171) #20 EDIL3 (ENSOJAG00000024107) #22 hapln1a (ENSOJAG00000024106) ENSOJAG00000024104 #24 ENSOJAG00000024102 tmem167a (ENSOJAG00000024101) #26 ENSOJAG00000024099 ENSOJAG00000024098 ENSOJAG00000024097 ENSOJAG00000024096 ENSOJAG00000024094 ENSOJAG00000024093 ssbp2a (ENSOJAG00000024079) ##33 ENSOJAG00000024070 ENSOJAG00000024069 ENSOJAG00000024068 f2r (ENSOJAG00000024067) Oryzias_a ANCESTRAL SPECIES 3 ENSGT00940000157876 ENSGT00940000164012.A.i ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000155779.b.b ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000164012.C.i.a.o ENSGT01030000236208 ENSGT00940000165930.B.g ENSGT00940000164012.C.i.a.p ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Japanese Medaka HdrR MODERN SPECIES 23 ENSORLG00000010183 ENSORLG00000029667 aqp3a (ENSORLG00000010176) ENSORLG00000025826 nol6 (ENSORLG00000010159) ENSORLG00000015946 ENSORLG00000025203 wdr54 (ENSORLG00000010104) rhobtb4 (ENSORLG00000010078) ENSORLG00000029781 mef2cb (ENSORLG00000010062) #16 tmem161b (ENSORLG00000010044) #17 ccnh (ENSORLG00000009984) #18 RASA1 (ENSORLG00000009952) #19 cox7c (ENSORLG00000009910) #20 EDIL3 (ENSORLG00000009900) #22 hapln1a (ENSORLG00000029206) ENSORLG00000009876 #24 ENSORLG00000024087 #24 ENSORLG00000009844 tmem167a (ENSORLG00000009841) #26 ENSORLG00000009836 ENSORLG00000024968 ENSORLG00000025317 ENSORLG00000025971 ENSORLG00000024762 zgc:110626 (ENSORLG00000009825) ENSORLG00000030513 ssbp2a (ENSORLG00000009816) ##33 ENSORLG00000009786 ENSORLG00000009780 Chinese medaka MODERN SPECIES 528 wdr54 (ENSOSIG00000008415) rhobtb4 (ENSOSIG00000008407) ENSOSIG00000008403 ENSOSIG00000008400 mef2cb (ENSOSIG00000008375) #16 tmem161b (ENSOSIG00000008367) #17 ccnh (ENSOSIG00000008365) #18 RASA1 (ENSOSIG00000004169) #19 cox7c (ENSOSIG00000004046) #20 EDIL3 (ENSOSIG00000003851) #22 hapln1a (ENSOSIG00000003813) ENSOSIG00000003778 #24 ENSOSIG00000003759 ENSOSIG00000003741 #24 ENSOSIG00000023866 tmem167a (ENSOSIG00000023865) #26 ENSOSIG00000023864 ENSOSIG00000023863 ENSOSIG00000023862 ENSOSIG00000023861 ENSOSIG00000023860 ENSOSIG00000023859 ssbp2a (ENSOSIG00000023827) ##33 ENSOSIG00000023763 ENSOSIG00000023762 Percomorphaceae_C ANCESTRAL SPECIES 7 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000167385 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000164012.C.i.a ENSGT00940000165930.B ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Eupercaria ANCESTRAL SPECIES 5 ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT01030000240301 ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000171478 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Tetraodontidae ANCESTRAL SPECIES 12 ENSGT00940000156031.e ENSGT00940000158953 ENSGT00610000086112 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000164012.A.i ENSGT00940000164012.A.j.e.a.a.b ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000171478 ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B.p ENSGT00940000165930.B.o ENSGT00940000164012.C.i.a ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e Fugu MODERN SPECIES 13 gig2p (ENSTRUG00000023008) MCTP1 (ENSTRUG00000002979) ENSTRUG00000031961 ENSTRUG00000004260 fam172a (ENSTRUG00000004456) nr2f1a (ENSTRUG00000022378) ENSTRUG00000004934 ENSTRUG00000032839 ENSTRUG00000025450 mef2cb (ENSTRUG00000000877) #16 tmem161b (ENSTRUG00000024436) #17 ccnh (ENSTRUG00000021055) #18 RASA1 (ENSTRUG00000001424) #19 cox7c (ENSTRUG00000021356) #20 ENSTRUG00000027436 EDIL3 (ENSTRUG00000001909) #22 hapln1a (ENSTRUG00000002504) ENSTRUG00000023341 #24 ENSTRUG00000024618 tmem167a (ENSTRUG00000030059) #26 ENSTRUG00000022193 ENSTRUG00000032284 ENSTRUG00000019858 zgc:110353 (ENSTRUG00000033159) zgc:110626 (ENSTRUG00000004658) ENSTRUG00000026429 ssbp2a (ENSTRUG00000005016) ##33 ENSTRUG00000021525 f2r (ENSTRUG00000005062) F2RL2 (ENSTRUG00000006610) iqgap2 (ENSTRUG00000005240) Tetraodon MODERN SPECIES 3 arrdc3a (ENSTNIG00000009898) #9 arsk (ENSTNIG00000009899) SKIC3 (ENSTNIG00000009900) MCTP1 (ENSTNIG00000009901) ENSTNIG00000000095 fam172a (ENSTNIG00000009902) wdr54 (ENSTNIG00000015444) rhobtb4 (ENSTNIG00000015443) ENSTNIG00000015442 mef2cb (ENSTNIG00000015441) #16 tmem161b (ENSTNIG00000015440) #17 ccnh (ENSTNIG00000015439) #18 RASA1 (ENSTNIG00000015438) #19 cox7c (ENSTNIG00000015437) #20 ENSTNIG00000001617 EDIL3 (ENSTNIG00000015436) #22 hapln1a (ENSTNIG00000015435) ENSTNIG00000001606 hapln1a (ENSTNIG00000000655) ENSTNIG00000015434 #24 ENSTNIG00000015433 tmem167a (ENSTNIG00000015432) #26 ENSTNIG00000015431 zgc:110626 (ENSTNIG00000001081) ENSTNIG00000000172 ssbp2a (ENSTNIG00000015430) ##33 ENSTNIG00000015429 ENSTNIG00000015428 ENSTNIG00000015427 f2r (ENSTNIG00000015426) iqgap2 (ENSTNIG00000015425) Eupecaria_A ANCESTRAL SPECIES 6 ENSGT00940000164012.A.j.f ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Ballan wrasse MODERN SPECIES 14 ENSLBEG00000007301 ENSLBEG00000007265 aqp3a (ENSLBEG00000007223) ENSLBEG00000007180 ENSLBEG00000007166 nol6 (ENSLBEG00000006902) ENSLBEG00000006809 wdr54 (ENSLBEG00000006784) rhobtb4 (ENSLBEG00000006733) ENSLBEG00000006643 mef2cb (ENSLBEG00000006550) #16 tmem161b (ENSLBEG00000006391) #17 ccnh (ENSLBEG00000006360) #18 RASA1 (ENSLBEG00000006216) #19 cox7c (ENSLBEG00000006182) #20 EDIL3 (ENSLBEG00000006158) #22 hapln1a (ENSLBEG00000006140) ENSLBEG00000006060 #24 ENSLBEG00000006018 ENSLBEG00000005999 ENSLBEG00000005969 ENSLBEG00000005953 ENSLBEG00000005858 ENSLBEG00000005801 fam219ab (ENSLBEG00000005756) klf9 (ENSLBEG00000005736) TRPM3 (ENSLBEG00000005550) ENSLBEG00000005499 cemip2 (ENSLBEG00000005424) abhd17b (ENSLBEG00000005400) zgc:101016 (ENSLBEG00000005383) Eupecaria_B ANCESTRAL SPECIES 6 ENSGT00940000164012.A.j.f ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Eupecaria_C ANCESTRAL SPECIES 3 ENSGT00940000164012.A.j.e.a.b ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT01050000244840.A.a.b.e Gilthead seabream MODERN SPECIES 19 ENSSAUG00010023556 ENSSAUG00010023559 aqp3a (ENSSAUG00010023560) nol6 (ENSSAUG00010023590) ENSSAUG00010024043 ENSSAUG00010024044 ENSSAUG00010024045 wdr54 (ENSSAUG00010024047) rhobtb4 (ENSSAUG00010024048) ENSSAUG00010024071 mef2cb (ENSSAUG00010024074) #16 tmem161b (ENSSAUG00010024079) #17 ccnh (ENSSAUG00010024115) #18 RASA1 (ENSSAUG00010024140) #19 COX7c (ENSSAUG00010024581) #20 EDIL3 (ENSSAUG00010024582) #22 hapln1a (ENSSAUG00010024583) ENSSAUG00010024584 #24 ENSSAUG00010024588 tmem167a (ENSSAUG00010000196) #26 ENSSAUG00010000209 ENSSAUG00010000228 ENSSAUG00010000244 ENSSAUG00010000251 ENSSAUG00010000256 ENSSAUG00010000259 ENSSAUG00010000272 ssbp2a (ENSSAUG00010000334) ##33 ENSSAUG00010000430 ENSSAUG00010000434 f2r (ENSSAUG00010000440) Eupercaria_incertae_sedis ANCESTRAL SPECIES 9 ENSGT00940000164012.A.j.e.a.b ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00950000183076.a.b.a European seabass MODERN SPECIES 13 ENSDLAG00005031490 ENSDLAG00005033161 ENSDLAG00005025965 ENSDLAG00005028189 ENSDLAG00005025963 ENSDLAG00005025945 ENSDLAG00005025940 wdr54 (ENSDLAG00005025938) ENSDLAG00005025931 ENSDLAG00005025921 mef2cb (ENSDLAG00005025910) #16 tmem161b (ENSDLAG00005025903) #17 ccnh (ENSDLAG00005025901) #18 RASA1 (ENSDLAG00005025876) #19 COX7C (ENSDLAG00005025866) #20 EDIL3 (ENSDLAG00005025863) #22 ENSDLAG00005025860 ENSDLAG00005033012 #24 ENSDLAG00005025855 #24 ENSDLAG00005025851 TMEM167A (ENSDLAG00005026698) #26 ENSDLAG00005025846 ENSDLAG00005025845 ENSDLAG00005034660 ENSDLAG00005025839 ENSDLAG00005025836 ENSDLAG00005025833 ENSDLAG00005025829 ENSDLAG00005033612 ENSDLAG00005030190 F2RL2 (ENSDLAG00005025793) Large yellow croaker MODERN SPECIES 2 ENSLCRG00005011975 ENSLCRG00005011977 aqp3a (ENSLCRG00005011978) nol6 (ENSLCRG00005011991) ENSLCRG00005012149 ENSLCRG00005012150 ENSLCRG00005012151 wdr54 (ENSLCRG00005012153) rhobtb4 (ENSLCRG00005012155) ENSLCRG00005012213 mef2cb (ENSLCRG00005012226) #16 tmem161b (ENSLCRG00005012232) #17 ccnh (ENSLCRG00005012235) #18 RASA1 (ENSLCRG00005012270) #19 cox7c (ENSLCRG00005012836) #20 EDIL3 (ENSLCRG00005012840) #22 hapln1a (ENSLCRG00005012841) ENSLCRG00005012842 #24 ENSLCRG00005012845 tmem167a (ENSLCRG00005012847) #26 ENSLCRG00005012851 zgc:110353 (ENSLCRG00005012852) ENSLCRG00005012853 ENSLCRG00005012854 ENSLCRG00005012856 ENSLCRG00005012857 ssbp2a (ENSLCRG00005012862) ##33 ENSLCRG00005013512 f2r (ENSLCRG00005013513) ENSLCRG00005013514 iqgap2 (ENSLCRG00005013527) Perciformes ANCESTRAL SPECIES 6 ENSGT00940000164012.A.j.f ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e Cottioidei ANCESTRAL SPECIES 11 ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT01030000240301 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00960000187962 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157995 #15 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e ENSGT01050000244840.A.b.b.a ENSGT00950000183076.a.b.a Lumpfish MODERN SPECIES 24 ENSCLMG00005021261 ENSCLMG00005021260 ENSCLMG00005021259 aqp3a (ENSCLMG00005021257) ENSCLMG00005021256 nol6 (ENSCLMG00005020818) ENSCLMG00005020801 wdr54 (ENSCLMG00005020799) rhobtb4 (ENSCLMG00005020795) ENSCLMG00005020793 mef2cb (ENSCLMG00005020784) #16 tmem161b (ENSCLMG00005020778) #17 ccnh (ENSCLMG00005020776) #18 RASA1 (ENSCLMG00005020356) #19 cox7c (ENSCLMG00005020349) #20 EDIL3 (ENSCLMG00005020348) #22 hapln1a (ENSCLMG00005020343) ENSCLMG00005020342 #24 ENSCLMG00005020341 tmem167a (ENSCLMG00005020340) #26 ENSCLMG00005020339 ENSCLMG00005020338 ENSCLMG00005020337 zgc:110626 (ENSCLMG00005020336) ssbp2a (ENSCLMG00005019300) ##33 f2r (ENSCLMG00005019280) F2RL2 (ENSCLMG00005019278) iqgap2 (ENSCLMG00005005209) sv2ca (ENSCLMG00005004960) ENSCLMG00005004952 ANKDD1B (ENSCLMG00005004948) Stickleback MODERN SPECIES 12 ENSGACG00000010379 ENSGACG00000010375 ENSGACG00000010369 aqp3a (ENSGACG00000010315) ENSGACG00000010311 nol6 (ENSGACG00000010296) wdr54 (ENSGACG00000010293) rhobtb4 (ENSGACG00000010281) ENSGACG00000010275 mef2cb (ENSGACG00000010270) #16 ENSGACG00000010269 tmem161b (ENSGACG00000010257) #17 ccnh (ENSGACG00000010245) #18 RASA1 (ENSGACG00000010225) #19 cox7c (ENSGACG00000010223) #20 EDIL3 (ENSGACG00000010214) #22 hapln1a (ENSGACG00000010212) ENSGACG00000010187 #24 ENSGACG00000010182 zgc:110626 (ENSGACG00000010177) ENSGACG00000010176 ssbp2a (ENSGACG00000010152) ##33 ENSGACG00000010148 ENSGACG00000010145 ENSGACG00000010141 f2r (ENSGACG00000010138) F2RL2 (ENSGACG00000010134) iqgap2 (ENSGACG00000010070) sv2ca (ENSGACG00000010037) ENSGACG00000010031 ANKDD1B (ENSGACG00000010026) Perciformes_a ANCESTRAL SPECIES 4 ENSGT00940000164012.A.j.f ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a ENSGT00950000182940.b.b.e Channel bull blenny MODERN SPECIES 23 ENSCGOG00000007682 ENSCGOG00000007695 aqp3a (ENSCGOG00000007701) nol6 (ENSCGOG00000007720) ENSCGOG00000007845 ENSCGOG00000007847 ENSCGOG00000007848 wdr54 (ENSCGOG00000007853) rhobtb4 (ENSCGOG00000007870) ENSCGOG00000007993 mef2cb (ENSCGOG00000008034) #16 tmem161b (ENSCGOG00000009180) #17 ccnh (ENSCGOG00000011232) #18 RASA1 (ENSCGOG00000009588) #19 cox7c (ENSCGOG00000011241) #20 EDIL3 (ENSCGOG00000011248) #22 hapln1a (ENSCGOG00000011381) ENSCGOG00000011382 #24 ENSCGOG00000011385 #24 ENSCGOG00000011389 tmem167a (ENSCGOG00000011391) #26 ENSCGOG00000011392 ENSCGOG00000011393 zgc:110353 (ENSCGOG00000011394) ENSCGOG00000011396 ENSCGOG00000011397 ENSCGOG00000011399 ENSCGOG00000011401 ssbp2a (ENSCGOG00000011435) ##33 ENSCGOG00000000456 ENSCGOG00000000466 Pike perch MODERN SPECIES 23 ENSSLUG00000004058 ENSSLUG00000004068 ENSSLUG00000004079 aqp3a (ENSSLUG00000004089) nol6 (ENSSLUG00000004204) ENSSLUG00000005597 ENSSLUG00000005614 wdr54 (ENSSLUG00000005618) rhobtb4 (ENSSLUG00000005656) ENSSLUG00000005716 mef2cb (ENSSLUG00000005748) #16 tmem161b (ENSSLUG00000005857) #17 ccnh (ENSSLUG00000006071) #18 RASA1 (ENSSLUG00000006142) #19 cox7c (ENSSLUG00000005215) #20 EDIL3 (ENSSLUG00000005243) #22 hapln1a (ENSSLUG00000005315) ENSSLUG00000005380 #24 ENSSLUG00000005441 tmem167a (ENSSLUG00000005447) #26 ENSSLUG00000005453 ENSSLUG00000005458 zgc:110626 (ENSSLUG00000005476) ssbp2a (ENSSLUG00000005602) ##33 f2r (ENSSLUG00000007139) iqgap2 (ENSSLUG00000007830) F2RL2 (ENSSLUG00000020097) sv2ca (ENSSLUG00000020101) ENSSLUG00000020112 ANKDD1B (ENSSLUG00000020118) POLK (ENSSLUG00000020136) Percomorphaceae_D ANCESTRAL SPECIES 7 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000167385 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000164012.C.i.a ENSGT00940000165930.B ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Anabantaria ANCESTRAL SPECIES 4 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000166272 ENSGT00940000167385 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000165930.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a Zig-zag eel MODERN SPECIES 23 ENSMAMG00000011437 ENSMAMG00000026917 ENSMAMG00000011462 ENSMAMG00000011484 ENSMAMG00000011495 ENSMAMG00000011507 wdr54 (ENSMAMG00000011516) ENSMAMG00000011523 ENSMAMG00000011535 ENSMAMG00000011550 mef2cb (ENSMAMG00000011560) #16 tmem161b (ENSMAMG00000011592) #17 ccnh (ENSMAMG00000011619) #18 RASA1 (ENSMAMG00000011657) #19 COX7C (ENSMAMG00000027597) #20 EDIL3 (ENSMAMG00000011724) #22 ENSMAMG00000027965 ENSMAMG00000011767 #24 ENSMAMG00000011814 TMEM167A (ENSMAMG00000011846) #26 ENSMAMG00000011859 ENSMAMG00000011866 ENSMAMG00000028361 ENSMAMG00000011925 ENSMAMG00000025750 ENSMAMG00000011985 ENSMAMG00000011958 ssbp2a (ENSMAMG00000012000) ##33 ENSMAMG00000012056 ENSMAMG00000026420 f2r (ENSMAMG00000012076) Anabantoidei ANCESTRAL SPECIES 4 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a Siamese fighting fish MODERN SPECIES 20 ENSBSLG00000017116 ENSBSLG00000017145 ENSBSLG00000017174 aqp3a (ENSBSLG00000017194) nol6 (ENSBSLG00000017274) ENSBSLG00000018665 ENSBSLG00000018668 wdr54 (ENSBSLG00000018679) rhobtb4 (ENSBSLG00000018688) ENSBSLG00000019107 mef2cb (ENSBSLG00000019183) #16 tmem161b (ENSBSLG00000019435) #17 ccnh (ENSBSLG00000019564) #18 RASA1 (ENSBSLG00000019594) #19 cox7c (ENSBSLG00000001732) #20 EDIL3 (ENSBSLG00000001777) #22 hapln1a (ENSBSLG00000001845) ENSBSLG00000001859 #24 ENSBSLG00000001901 tmem167a (ENSBSLG00000001903) #26 ENSBSLG00000001906 ENSBSLG00000001913 ENSBSLG00000001918 ENSBSLG00000001923 ENSBSLG00000001924 ENSBSLG00000001926 ssbp2a (ENSBSLG00000001953) ##33 ENSBSLG00000002036 f2r (ENSBSLG00000002039) iqgap2 (ENSBSLG00000002055) F2RL2 (ENSBSLG00000002072) Climbing perch MODERN SPECIES 22 ENSATEG00000026064 ENSATEG00000003612 ENSATEG00000003619 ENSATEG00000003713 ENSATEG00000026315 ENSATEG00000027754 wdr54 (ENSATEG00000003734) ENSATEG00000003743 ENSATEG00000003754 mef2cb (ENSATEG00000003768) #16 tmem161b (ENSATEG00000003816) #17 ccnh (ENSATEG00000003872) #18 RASA1 (ENSATEG00000003886) #19 COX7C (ENSATEG00000026925) #20 ENSATEG00000029237 EDIL3 (ENSATEG00000004002) #22 ENSATEG00000004006 ENSATEG00000027621 #24 ENSATEG00000004104 #24 ENSATEG00000004128 TMEM167A (ENSATEG00000004151) #26 ENSATEG00000004172 ENSATEG00000004194 ENSATEG00000004259 ENSATEG00000004225 ssbp2a (ENSATEG00000004291) ##33 ENSATEG00000004380 ENSATEG00000025398 f2r (ENSATEG00000004415) iqgap2 (ENSATEG00000004425) F2RL2 (ENSATEG00000004583) Carangaria ANCESTRAL SPECIES 9 ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00390000018619 ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT01100000264020 ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Pleuronectoidei ANCESTRAL SPECIES 8 ENSGT00940000157876 ENSGT00940000164012.A.i ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018319.a.b.b.a ENSGT00390000018619 ENSGT00940000158431.a.a.a.a.b.b.b ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b ENSGT01050000244840.A.a.b.e Turbot MODERN SPECIES 21 nr2f1a (ENSSMAG00000008630) ENSSMAG00000008703 ENSSMAG00000008718 ENSSMAG00000008727 ENSSMAG00000008757 ENSSMAG00000025218 ENSSMAG00000008811 wdr54 (ENSSMAG00000008814) ENSSMAG00000008831 ENSSMAG00000008870 mef2cb (ENSSMAG00000008887) #16 tmem161b (ENSSMAG00000008948) #17 ccnh (ENSSMAG00000008982) #18 RASA1 (ENSSMAG00000009031) #19 COX7C (ENSSMAG00000009118) #20 EDIL3 (ENSSMAG00000009133) #22 ENSSMAG00000035326 ENSSMAG00000009163 #24 ENSSMAG00000009177 TMEM167A (ENSSMAG00000009194) #26 ENSSMAG00000027869 ENSSMAG00000033038 ENSSMAG00000009236 ENSSMAG00000009256 ENSSMAG00000009278 ENSSMAG00000009338 ENSSMAG00000009356 ssbp2a (ENSSMAG00000009366) ##33 ENSSMAG00000009398 ENSSMAG00000009417 ENSSMAG00000027594 Tongue sole DUPLICATION Tongue sole MODERN SPECIES 44 EDIL3 (ENSCSEG00000017075) #22 Tongue sole MODERN SPECIES 397 ENSCSEG00000011126 npr3 (ENSCSEG00000011131) ENSCSEG00000011154 zfr (ENSCSEG00000011169) ENSCSEG00000011239 ENSCSEG00000011246 ENSCSEG00000011255 ENSCSEG00000011270 smim15 (ENSCSEG00000011276) ndufaf2 (ENSCSEG00000011277) golph3a (ENSCSEG00000011294) ENSCSEG00000011308 mob1a (ENSCSEG00000011323) mthfd2 (ENSCSEG00000011344) ENSCSEG00000011359 EDIL3 (ENSCSEG00000011361) #22 tmem167a (ENSCSEG00000011371) #26 ENSCSEG00000011375 #24 hapln1a (ENSCSEG00000011392) ENSCSEG00000011431 cert1a (ENSCSEG00000011472) ENSCSEG00000011533 ENSCSEG00000011555 ENSCSEG00000011560 ENSCSEG00000011566 GOLM1 (ENSCSEG00000011570) naa35 (ENSCSEG00000011579) ENSCSEG00000011606 NTRK2 (ENSCSEG00000011619) HNRNPK (ENSCSEG00000011661) ENSCSEG00000011690 Carangaria_A ANCESTRAL SPECIES 6 ENSGT00940000174528 ENSGT00940000164012.A.i ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018619 ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT01100000264020 ENSGT00940000164012.C.i.a ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b ENSGT00510000050125.b.b Seriola ANCESTRAL SPECIES 7 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000164012.A.i ENSGT00940000164012.A.j ENSGT00530000067979 ENSGT00940000157242.a.a ENSGT00390000018619 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.a #24 ENSGT00940000166544.b ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00940000165930.A ENSGT00940000165930.B ENSGT00940000164012.C.i.a.f ENSGT01100000264020 ENSGT00940000164012.C.i.a.e ENSGT00940000164012.C.i.b ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT00510000050125.b.a.a ENSGT00510000050125.b.a.b Yellowtail amberjack MODERN SPECIES 2439 ENSSLDG00000016909 EDIL3 (ENSSLDG00000016951) #22 Greater amberjack MODERN SPECIES 6 ENSSDUG00000017569 ENSSDUG00000017557 ENSSDUG00000017546 aqp3a (ENSSDUG00000016931) ENSSDUG00000016862 ENSSDUG00000016850 nol6 (ENSSDUG00000016772) wdr54 (ENSSDUG00000016743) rhobtb4 (ENSSDUG00000016679) ENSSDUG00000016592 mef2cb (ENSSDUG00000016566) #16 tmem161b (ENSSDUG00000016530) #17 ccnh (ENSSDUG00000016522) #18 RASA1 (ENSSDUG00000016434) #19 cox7c (ENSSDUG00000016425) #20 EDIL3 (ENSSDUG00000016384) #22 hapln1a (ENSSDUG00000016379) ENSSDUG00000016328 #24 ENSSDUG00000016293 tmem167a (ENSSDUG00000016282) #26 ENSSDUG00000016276 ENSSDUG00000016266 ENSSDUG00000016255 ENSSDUG00000016240 ENSSDUG00000016187 ENSSDUG00000016171 ENSSDUG00000016157 ssbp2a (ENSSDUG00000016131) ##33 ENSSDUG00000016123 ENSSDUG00000016112 ENSSDUG00000016094 Barramundi perch MODERN SPECIES 95 ENSLCAG00010027887 ENSLCAG00010027888 aqp3a (ENSLCAG00010027889) nol6 (ENSLCAG00010027892) CARTPT (ENSLCAG00010027895) ENSLCAG00010027896 ENSLCAG00010027897 wdr54 (ENSLCAG00010027900) rhobtb4 (ENSLCAG00010027901) ENSLCAG00010027903 mef2cb (ENSLCAG00010027910) #16 tmem161b (ENSLCAG00010027918) #17 ccnh (ENSLCAG00010027920) #18 RASA1 (ENSLCAG00010027922) #19 cox7c (ENSLCAG00010027923) #20 EDIL3 (ENSLCAG00010027924) #22 hapln1a (ENSLCAG00010027925) ENSLCAG00010027930 #24 ENSLCAG00010027937 tmem167a (ENSLCAG00010027939) #26 ENSLCAG00010027942 ENSLCAG00010027944 ENSLCAG00010027947 ENSLCAG00010027959 ENSLCAG00010027961 ENSLCAG00010027962 ssbp2a (ENSLCAG00010027964) ##33 ENSLCAG00010027980 ENSLCAG00010027981 ENSLCAG00010027982 f2r (ENSLCAG00010027983) Pinecone sodierfish MODERN SPECIES 23 ENSMMDG00005012114 ENSMMDG00005012119 ENSMMDG00005012122 aqp3a (ENSMMDG00005012124) nol6 (ENSMMDG00005012197) ENSMMDG00005014428 ENSMMDG00005014432 wdr54 (ENSMMDG00005014433) rhobtb4 (ENSMMDG00005014439) ENSMMDG00005014441 mef2cb (ENSMMDG00005014452) #16 tmem161b (ENSMMDG00005014478) #17 ccnh (ENSMMDG00005014495) #18 RASA1 (ENSMMDG00005014548) #19 cox7c (ENSMMDG00005017412) #20 EDIL3 (ENSMMDG00005017415) #22 hapln1a (ENSMMDG00005017418) ENSMMDG00005017437 #24 ENSMMDG00005017438 tmem167a (ENSMMDG00005017440) #26 ENSMMDG00005017441 ENSMMDG00005017442 ENSMMDG00005017444 zgc:110626 (ENSMMDG00005017445) ENSMMDG00005017447 f2r (ENSMMDG00005017448) iqgap2 (ENSMMDG00005017661) F2RL2 (ENSMMDG00005023840) sv2ca (ENSMMDG00005023842) ENSMMDG00005023845 ANKDD1B (ENSMMDG00005023846) Cod MODERN SPECIES 19 ENSGMOG00000026740 ENSGMOG00000000677 ENSGMOG00000036236 ENSGMOG00000000637 wdr54 (ENSGMOG00000000619) ENSGMOG00000029502 ENSGMOG00000000605 ENSGMOG00000033093 mef2cb (ENSGMOG00000000565) #16 tmem161b (ENSGMOG00000000557) #17 ccnh (ENSGMOG00000000542) #18 RASA1 (ENSGMOG00000000513) #19 COX7C (ENSGMOG00000000506) #20 ENSGMOG00000031424 ENSGMOG00000022366 EDIL3 (ENSGMOG00000018919) #22 ENSGMOG00000011145 ENSGMOG00000028069 #24 ENSGMOG00000016422 #24 ENSGMOG00000027751 TMEM167A (ENSGMOG00000033366) #26 ENSGMOG00000011069 ENSGMOG00000011055 ENSGMOG00000026305 ENSGMOG00000036026 ssbp2a (ENSGMOG00000011029) ##33 f2r (ENSGMOG00000011006) F2RL2 (ENSGMOG00000032744) iqgap2 (ENSGMOG00000010974) sv2ca (ENSGMOG00000010961) ENSGMOG00000010940 Otomorpha ANCESTRAL SPECIES 87 ENSGT00940000156031.f ENSGT00940000160879 ENSGT00940000157876.c ENSGT00940000164012.A ENSGT00940000157876.d ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000263701 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b #24 ENSGT00940000166014 ENSGT00940000164012.C ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a ENSGT00950000182940.b.b.e ENSGT00940000164571 ENSGT00940000154170.A ENSGT00970000197576 ENSGT00940000156667 Otophysi ANCESTRAL SPECIES 20 ENSGT00940000161769.b.b ENSGT00940000159913.b ENSGT00940000156031.f ENSGT00940000160879 ENSGT00940000157876.c ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000263701 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b #24 ENSGT00940000166014 ENSGT00940000164012.C ENSGT00950000183049.E ##33 ENSGT01050000244840.A.a.b.e ENSGT01050000244840.A.b.b.a ENSGT00950000183076.a.b.a ENSGT00950000182940.b.b.e ENSGT00940000164571 ENSGT00940000154170.A ENSGT00970000197576 ENSGT00940000156667 Characiphysae ANCESTRAL SPECIES 36 ENSGT00940000159913.b ENSGT00940000159913.a.b ENSGT00940000156031.f ENSGT00940000160879 ENSGT00940000157876.c ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000263701 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b #24 ENSGT00940000166014 ENSGT00940000164012.C ENSGT00950000183049.E ##33 ENSGT01050000244840.A.a.b.e ENSGT01050000244840.A.b.b.a ENSGT00950000183076.a.b.a ENSGT00950000182940.b.b.e ENSGT00940000164571 ENSGT00940000154170.A ENSGT00970000197576 ENSGT00940000156667 ENSGT00940000157242.a.a Characiphysae_b ANCESTRAL SPECIES 9 ENSGT00940000159913.b ENSGT00940000159913.a.b ENSGT00940000156031.f ENSGT00940000160879 ENSGT00940000157876.c ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000263701 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b #24 ENSGT00940000166014 ENSGT00940000164012.C ENSGT00950000183049.E ##33 ENSGT01050000244840.A.a.b.e ENSGT01050000244840.A.b.b.a ENSGT00950000183076.a.b.a ENSGT00950000182940.b.b.e ENSGT00940000164571 ENSGT00940000154170.A ENSGT00970000197576 ENSGT00940000156667 ENSGT00940000157242.a.a Characoidei ANCESTRAL SPECIES 10 ENSGT00940000153771.B ENSGT00830000128422 ENSGT00940000158199 ENSGT00940000156724 ENSGT00940000164012.A.a ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000263701 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 Red-bellied piranha MODERN SPECIES 39 mboat4 (ENSPNAG00000012988) gldc (ENSPNAG00000013033) coq2 (ENSPNAG00000002534) mfsd10 (ENSPNAG00000002540) inpp5e (ENSPNAG00000013068) pmpca (ENSPNAG00000002560) ENSPNAG00000013122 ENSPNAG00000013143 ENSPNAG00000013171 arrdc3a (ENSPNAG00000002600) #9 adgrv1 (ENSPNAG00000002641) #10 lysmd3 (ENSPNAG00000002649) #12 polr3g (ENSPNAG00000005454) mblac2 (ENSPNAG00000013263) #14 cox7c (ENSPNAG00000002667) #20 EDIL3 (ENSPNAG00000013308) #22 HAPLN1 (ENSPNAG00000002713) #23 ENSPNAG00000013363 #24 ENSPNAG00000013371 zgc:110626 (ENSPNAG00000013387) ssbp2a (ENSPNAG00000013397) ##33 f2r (ENSPNAG00000013412) F2RL2 (ENSPNAG00000013416) iqgap2 (ENSPNAG00000002783) sv2ca (ENSPNAG00000013551) ENSPNAG00000002821 ANKDD1B (ENSPNAG00000005016) POLK (ENSPNAG00000013620) aqp3a (ENSPNAG00000013653) ENSPNAG00000013661 wdr54 (ENSPNAG00000002878) Mexicana tetra MODERN SPECIES 26 ENSAMXG00000014505 ENSAMXG00000038885 arrdc3a (ENSAMXG00000011884) #9 adgrv1 (ENSAMXG00000037980) #10 ENSAMXG00000031651 lysmd3 (ENSAMXG00000033332) #12 polr3g (ENSAMXG00000014591) mblac2 (ENSAMXG00000032070) #14 mef2cb (ENSAMXG00000040877) #16 tmem161b (ENSAMXG00000037421) #17 ccnh (ENSAMXG00000014644) #18 RASA1 (ENSAMXG00000014658) #19 cox7c (ENSAMXG00000032595) #20 ENSAMXG00000043082 ENSAMXG00000039110 EDIL3 (ENSAMXG00000035829) #22 HAPLN1 (ENSAMXG00000042653) #23 ENSAMXG00000031311 #24 ENSAMXG00000031084 #24 ENSAMXG00000031430 ssbp2a (ENSAMXG00000031820) ##33 f2r (ENSAMXG00000039666) iqgap2 (ENSAMXG00000013577) F2RL2 (ENSAMXG00000040816) sv2ca (ENSAMXG00000013674) ENSAMXG00000036512 ANKDD1B (ENSAMXG00000031396) POLK (ENSAMXG00000013760) aqp3a (ENSAMXG00000042262) ENSAMXG00000039267 wdr54 (ENSAMXG00000030513) Electric eel MODERN SPECIES 234 EDIL3 (ENSEEEG00000006898) #22 hapln1a (ENSEEEG00000006886) ENSEEEG00000006882 #24 ENSEEEG00000006881 #24 ENSEEEG00000006879 zgc:110626 (ENSEEEG00000006876) ssbp2a (ENSEEEG00000006875) ##33 f2r (ENSEEEG00000006874) F2RL2 (ENSEEEG00000006873) iqgap2 (ENSEEEG00000004247) sv2ca (ENSEEEG00000004181) ENSEEEG00000004170 ANKDD1B (ENSEEEG00000004166) ENSEEEG00000004164 POLK (ENSEEEG00000004160) aqp3a (ENSEEEG00000004158) Channel catfish MODERN SPECIES 14 mfsd10 (ENSIPUG00000014155) inpp5e (ENSIPUG00000014120) pmpca (ENSIPUG00000014064) ENSIPUG00000014034 ENSIPUG00000014009 arrdc3a (ENSIPUG00000013996) #9 adgrv1 (ENSIPUG00000013862) #10 lysmd3 (ENSIPUG00000013836) #12 polr3g (ENSIPUG00000013820) MBLAC2 (ENSIPUG00000013810) #14 mef2c (ENSIPUG00000013747) #16 tmem161b (ENSIPUG00000013679) #17 ccnh (ENSIPUG00000013612) #18 rasa1 (ENSIPUG00000013511) #19 COX7C (ENSIPUG00000013488) #20 EDIL3 (ENSIPUG00000013455) #22 hapln1a (ENSIPUG00000013442) vcan (ENSIPUG00000013420) #24 ENSIPUG00000013411 zgc:110626 (ENSIPUG00000013386) ssbp2 (ENSIPUG00000013265) ##33 f2r (ENSIPUG00000013239) F2RL2 (ENSIPUG00000013232) iqgap2 (ENSIPUG00000013096) sv2c (ENSIPUG00000013042) poc5 (ENSIPUG00000013008) Ankdd1b (ENSIPUG00000012979) polk (ENSIPUG00000012942) aqp3a (ENSIPUG00000012906) ENSIPUG00000012892 wdr54 (ENSIPUG00000012842) Cyprinoidei ANCESTRAL SPECIES 43 ENSGT00610000086112 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876.d ENSGT00940000164012.A ENSGT00940000155411.c.m.a #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT01100000263701 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000166906 ENSGT00940000156102.q.b #24 ENSGT00940000166014 ENSGT00940000164012.C ENSGT00950000183049.E ##33 ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a ENSGT00950000182940.b.b.e ENSGT00940000164571 ENSGT00940000154170.A ENSGT00940000156667 ENSGT00940000165457.b ENSGT00940000156290.a ENSGT00390000000113.B Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000157876.d.b ENSGT00940000164012.A.d ENSGT00940000155411.c.m.a #9 ENSGT00940000154880 #10 ENSGT00940000158711.c #12 ENSGT00390000017819.e #14 ENSGT00940000157492.b.e.a #16 ENSGT00940000158711.d #12 ENSGT01100000263701 ENSGT00390000017819.f #14 ENSGT00940000157492.b.f #16 ENSGT00390000000672.a.b.v #17 ENSGT00390000008634.k #18 ENSGT00940000155846.h.b #19 ENSGT00390000018086.c #20 ENSGT00940000158144.a.e #22 ENSGT00940000166906.g ENSGT00940000156102.q.b.g #24 ENSGT00940000166014.g ENSGT00940000164012.C.d ENSGT00950000183049.E.t.a ##33 ENSGT01050000244840.A.a.b.e.a ENSGT00950000183076.a.b.a.a ENSGT01050000244840.A.b.b.a.b ENSGT00950000182940.b.b.e.b ENSGT00940000164571.a ENSGT00940000156667.k ENSGT00940000165457.b.a ENSGT00940000156290.a.a ENSGT00390000000113.B.h ENSGT01070000253744.b.b.e.a.a.a Cyprininae_a ANCESTRAL SPECIES 531 ENSGT00530000063907.c.f ENSGT00940000157876.d.b ENSGT00940000164012.A.d ENSGT00940000155411.c.m.a #9 ENSGT00940000154880 #10 ENSGT00940000158711.d #12 ENSGT01100000263701 ENSGT00390000017819.f #14 ENSGT00940000157492.b.e.b #16 ENSGT00390000000672.a.b.u #17 ENSGT00390000008634.l #18 ENSGT00940000155846.h.a #19 ENSGT00940000158144.a.e #22 Golden-line barbel MODERN SPECIES 2753 ENSSGRG00000011742 #22 Common carp reference MODERN SPECIES 15 fam172a (ENSCCRG00000075922) ENSCCRG00000070994 nr2f1a (ENSCCRG00000004148) ENSCCRG00000074714 ENSCCRG00000079620 ENSCCRG00000082638 arrdc3a (ENSCCRG00000070181) #9 adgrv1 (ENSCCRG00000001765) #10 lysmd3 (ENSCCRG00000013677) #12 polr3g (ENSCCRG00000073638) mblac2 (ENSCCRG00000013675) #14 mef2cb (ENSCCRG00000033625) #16 tmem161b (ENSCCRG00000032578) #17 ccnh (ENSCCRG00000032654) #18 RASA1 (ENSCCRG00000032728) #19 EDIL3 (ENSCCRG00000073037) #22 hapln1a (ENSCCRG00000051272) ENSCCRG00000054071 #24 ENSCCRG00000070726 ENSCCRG00000025959 ENSCCRG00000041408 ssbp2a (ENSCCRG00000019895) ##33 f2r (ENSCCRG00000019984) iqgap2 (ENSCCRG00000080285) F2RL2 (ENSCCRG00000041422) sv2ca (ENSCCRG00000041429) ENSCCRG00000041503 POLK (ENSCCRG00000041529) ENSCCRG00000060599 slc4a4a (ENSCCRG00000009148) gc (ENSCCRG00000001110) Goldfish MODERN SPECIES 2534 EDIL3 (ENSCARG00000052956) #22 hapln1a (ENSCARG00000053001) ENSCARG00000053040 #24 ENSCARG00000053116 ENSCARG00000053127 ssbp2a (ENSCARG00000053143) ##33 f2r (ENSCARG00000053236) iqgap2 (ENSCARG00000053891) F2RL2 (ENSCARG00000068237) POLK (ENSCARG00000068242) ifngr2 (ENSCARG00000068252) Cyprininae ANCESTRAL SPECIES 53 ENSGT00940000157492.b.e.b #16 ENSGT00390000000672.a.b.u #17 ENSGT00390000008634.l #18 ENSGT00940000155846.h.a #19 ENSGT00390000018086.d #20 ENSGT00940000158144.a.f #22 ENSGT00940000166906.h ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b.h #24 ENSGT00940000166014.h ENSGT00940000164012.C.c ENSGT00950000183049.E.t.b ##33 ENSGT01050000244840.A.a.b.e.b ENSGT01050000244840.A.b.b.a.a ENSGT00950000183076.a.b.a.b ENSGT00950000182940.b.b.e.a ENSGT00940000164571.b ENSGT00940000154170.A ENSGT00940000156667.l ENSGT00940000165457.b.b ENSGT00940000156290.a.b Goldfish MODERN SPECIES 23 LONRF1 (ENSCARG00000042637) ENSCARG00000042625 B3GNT3 (ENSCARG00000042616) ENSCARG00000042186 ccdc124 (ENSCARG00000042111) kcnn1b (ENSCARG00000042076) ENSCARG00000042064 zgc:194990 (ENSCARG00000042031) itgb4 (ENSCARG00000040676) sap30bp (ENSCARG00000040273) ENSCARG00000040231 dennd2da (ENSCARG00000040081) ENSCARG00000040074 CEPT1 (ENSCARG00000039926) kif2a (ENSCARG00000038449) EDIL3 (ENSCARG00000038230) #22 hapln1a (ENSCARG00000038212) ENSCARG00000038141 #24 ENSCARG00000038118 ENSCARG00000038071 ssbp2a (ENSCARG00000036772) ##33 f2r (ENSCARG00000036706) ENSCARG00000036686 F2RL2 (ENSCARG00000036677) iqgap2 (ENSCARG00000026236) sv2ca (ENSCARG00000025726) ENSCARG00000025709 ANKDD1B (ENSCARG00000025684) POLK (ENSCARG00000025641) ifngr2 (ENSCARG00000025619) slc4a4a (ENSCARG00000019161) Cyprininae_a ANCESTRAL SPECIES 151 ENSGT00940000158144.a.f #22 ENSGT00940000166906.h ENSGT00940000156102.q.a.b #24 ENSGT00940000156102.q.b.h #24 ENSGT00940000166014.h ENSGT00940000164012.C.c ENSGT00950000183049.E.t.b ##33 ENSGT01050000244840.A.a.b.e.b ENSGT00950000183076.a.b.a.b ENSGT01050000244840.A.b.b.a.a ENSGT00950000182940.b.b.e.a ENSGT00940000164571.b ENSGT00940000156667.l ENSGT00940000156290.a.b ENSGT00390000000113.B.g ENSGT01070000253744.b.b.e.a.a.b Golden-line barbel MODERN SPECIES 782 EDIL3 (ENSSGRG00000037876) #22 hapln1a (ENSSGRG00000037875) ENSSGRG00000037864 #24 ENSSGRG00000037863 ENSSGRG00000037862 ENSSGRG00000037861 ssbp2a (ENSSGRG00000037837) ##33 f2r (ENSSGRG00000037831) F2RL2 (ENSSGRG00000037829) iqgap2 (ENSSGRG00000032555) sv2ca (ENSSGRG00000032399) ENSSGRG00000032398 Common carp reference MODERN SPECIES 7 ENSCCRG00000080496 ENSCCRG00000006208 KIAA0825 (ENSCCRG00000027807) fam172a (ENSCCRG00000062954) nr2f1a (ENSCCRG00000004169) ENSCCRG00000042538 ARRDC3 (ENSCCRG00000054898) #9 lysmd3 (ENSCCRG00000029548) #12 mblac2 (ENSCCRG00000076340) #14 mef2cb (ENSCCRG00000066685) #16 tmem161b (ENSCCRG00000062471) #17 ccnh (ENSCCRG00000032476) #18 RASA1 (ENSCCRG00000032499) #19 ENSCCRG00000055250 COX7C (ENSCCRG00000030424) #20 EDIL3 (ENSCCRG00000025530) #22 hapln1a (ENSCCRG00000025988) ENSCCRG00000025969 #24 ENSCCRG00000025654 ENSCCRG00000067008 ssbp2a (ENSCCRG00000025930) ##33 f2r (ENSCCRG00000025914) iqgap2 (ENSCCRG00000080066) F2RL2 (ENSCCRG00000025911) sv2ca (ENSCCRG00000017476) ENSCCRG00000044683 POLK (ENSCCRG00000065827) ifngr2 (ENSCCRG00000044672) slc4a4a (ENSCCRG00000028529) gc (ENSCCRG00000028390) NPFFR2 (ENSCCRG00000075865) Zebrafish MODERN SPECIES 20 ENSDARG00000077072 fam172a (ENSDARG00000052697) nr2f1a (ENSDARG00000052695) ENSDARG00000067664 arrdc3a (ENSDARG00000052690) #9 adgrv1 (ENSDARG00000021137) #10 lysmd3 (ENSDARG00000024693) #12 polr3g (ENSDARG00000024687) mblac2 (ENSDARG00000059689) #14 mef2cb (ENSDARG00000009418) #16 tmem161b (ENSDARG00000055989) #17 ENSDARG00000067658 ccnh (ENSDARG00000007657) #18 RASA1 (ENSDARG00000035535) #19 cox7c (ENSDARG00000104537) #20 EDIL3 (ENSDARG00000093413) #22 hapln1a (ENSDARG00000089769) ENSDARG00000103515 #24 ENSDARG00000098013 si:ch211-130m23.2 (ENSDARG00000095136) zgc:110626 (ENSDARG00000053159) ssbp2a (ENSDARG00000057395) ##33 f2r (ENSDARG00000060012) F2RL2 (ENSDARG00000090524) iqgap2 (ENSDARG00000060010) sv2ca (ENSDARG00000059997) ENSDARG00000059982 ANKDD1B (ENSDARG00000025866) POLK (ENSDARG00000059963) ifngr2 (ENSDARG00000067795) slc4a4a (ENSDARG00000013730) Clupeiformes ANCESTRAL SPECIES 77 ENSGT01080000257489 ENSGT01030000234997 ENSGT01000000214878 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174.f ENSGT00940000158711 #12 ENSGT01040000240520 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000156102.q.b #24 ENSGT00940000166014 ENSGT00940000164012.C ENSGT00940000164012.B ENSGT00950000183049.E ##33 ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a ENSGT00950000182940.b.b.e ENSGT00940000164571 ENSGT00940000154170.A ENSGT00940000156667 ENSGT00940000160028 ENSGT00440000033872 ENSGT00390000008802.a.a Atlantic herring MODERN SPECIES 23 cxcl11.1 (ENSCHAG00000012224) ENSCHAG00000012277 ENSCHAG00000012312 cnot6l (ENSCHAG00000012356) mrpl1 (ENSCHAG00000012472) fras1 (ENSCHAG00000012524) anxa3a (ENSCHAG00000013950) lysmd3 (ENSCHAG00000014461) #12 ENSCHAG00000014470 mblac2 (ENSCHAG00000014481) #14 mef2cb (ENSCHAG00000014511) #16 tmem161b (ENSCHAG00000014729) #17 ccnh (ENSCHAG00000015179) #18 RASA1 (ENSCHAG00000015296) #19 cox7c (ENSCHAG00000017092) #20 EDIL3 (ENSCHAG00000017117) #22 ENSCHAG00000017275 ENSCHAG00000017305 #24 ENSCHAG00000017328 #24 ENSCHAG00000017352 zgc:110626 (ENSCHAG00000017380) ENSCHAG00000017394 ENSCHAG00000017404 ENSCHAG00000017416 ENSCHAG00000017446 ssbp2a (ENSCHAG00000017487) ##33 f2r (ENSCHAG00000017689) iqgap2 (ENSCHAG00000017859) F2RL2 (ENSCHAG00000024845) sv2ca (ENSCHAG00000024866) ENSCHAG00000025021 Denticle herring MODERN SPECIES 2 ENSDCDG00000023370 ENSDCDG00000023373 ENSDCDG00000023375 ENSDCDG00000023377 cnot6l (ENSDCDG00000023380) mrpl1 (ENSDCDG00000023386) ENSDCDG00000023388 fras1 (ENSDCDG00000023429) lysmd3 (ENSDCDG00000024975) #12 mblac2 (ENSDCDG00000024978) #14 mef2cb (ENSDCDG00000024982) #16 tmem161b (ENSDCDG00000025039) #17 ccnh (ENSDCDG00000025105) #18 RASA1 (ENSDCDG00000025154) #19 cox7c (ENSDCDG00000026796) #20 EDIL3 (ENSDCDG00000026815) #22 HAPLN1 (ENSDCDG00000026996) #23 ENSDCDG00000026999 #24 ENSDCDG00000027001 #24 ENSDCDG00000027012 cxcl11.1 (ENSDCDG00000027014) cxcl11.1 (ENSDCDG00000027033) cxcl11.1 (ENSDCDG00000027047) ENSDCDG00000027050 rufy3 (ENSDCDG00000027088) GRSF1 (ENSDCDG00000028062) mob1ba (ENSDCDG00000028072) slc4a4a (ENSDCDG00000028125) gc (ENSDCDG00000028587) gck (ENSDCDG00000028620) fzd10 (ENSDCDG00000028855) Osteoglossocephalai ANCESTRAL SPECIES 132 ENSGT00940000165983 ENSGT00530000063907.c ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000158711 #12 ENSGT00940000165856 ENSGT01040000240520 ENSGT00390000017819 #14 ENSGT00940000157492.b #16 ENSGT00390000000672.a.b #17 ENSGT00390000008634 #18 ENSGT00940000155846 #19 ENSGT00390000018086 #20 ENSGT00940000158144.a #22 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00940000166014 ENSGT00390000000924 #31 ENSGT00950000183049.E ##33 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00950000182772.B.a.a #36 ENSGT00940000155679.d #37 ENSGT00390000012355.A.a.a.b ENSGT00940000154290.b ENSGT00940000163574 ENSGT00940000155771.c Osteoglossiformes ANCESTRAL SPECIES 142 ENSGT00940000158873 ENSGT00940000161418 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372.b ENSGT00940000160516.h ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000156031.e.b ENSGT00940000157876 ENSGT00940000155411.c #9 ENSGT00940000158711 #12 ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00390000000672.a.b #17 ENSGT00940000158144.b #22 ENSGT00940000158144.a #22 ENSGT00940000159267 #23 ENSGT00940000156102.q #24 ENSGT00940000155186.a #26 ENSGT00940000166014 ENSGT00950000183049.E.a ##33 ENSGT00940000155679.c #37 ENSGT00550000074949 ENSGT00940000165661.b ENSGT00390000012355.A.a.b ENSGT00530000063681.b.a ENSGT00940000166823 ENSGT00390000015930 ENSGT00940000155771.d ENSGT00730000110989.c.b P. kingsleyae MODERN SPECIES 110 ENSPKIG00000005279 MCTP1 (ENSPKIG00000005391) NR2F1 (ENSPKIG00000005614) ENSPKIG00000005622 ENSPKIG00000005640 #9 lysmd3 (ENSPKIG00000005668) #12 cetn3 (ENSPKIG00000005747) #15 mef2ca (ENSPKIG00000005809) ##16 tmem161b (ENSPKIG00000005884) #17 RASA1 (ENSPKIG00000005956) #19 ENSPKIG00000006055 EDIL3 (ENSPKIG00000006122) #22 HAPLN1 (ENSPKIG00000006269) #23 ENSPKIG00000006325 #24 ENSPKIG00000006348 #24 xrcc4 (ENSPKIG00000006359) tmem167a (ENSPKIG00000006381) #26 atg10 (ENSPKIG00000006450) #31 ENSPKIG00000006542 ##33 ACOT12 (ENSPKIG00000006605) #34 zcchc9 (ENSPKIG00000006659) #35 ckmt2a (ENSPKIG00000006702) #36 RASGRF2 (ENSPKIG00000006766) #37 Asian bonytongue MODERN SPECIES 21 npm2b (ENSSFOG00015010466) MYO18B (ENSSFOG00015010505) grk3 (ENSSFOG00015010675) cryba4 (ENSSFOG00015025272) ENSSFOG00015010822 acads (ENSSFOG00015010959) cldn5b (ENSSFOG00015027119) MCTP1 (ENSSFOG00015011025) nr2f1a (ENSSFOG00015028103) ENSSFOG00015011118 #9 ENSSFOG00015029012 #12 ENSSFOG00015025437 mef2ca (ENSSFOG00015011194) ##16 tmem161b (ENSSFOG00015011239) #17 RASA1 (ENSSFOG00015011306) #19 EDIL3 (ENSSFOG00015011393) #22 ENSSFOG00015031680 HAPLN1 (ENSSFOG00015011424) #23 xrcc4 (ENSSFOG00015011484) tmem167a (ENSSFOG00015011502) #26 atg10 (ENSSFOG00015027963) #31 zcchc9 (ENSSFOG00015011594) #35 ckmt2a (ENSSFOG00015011609) #36 dhfr (ENSSFOG00015025319) ENSSFOG00015011648 rad17 (ENSSFOG00015011680) MARVELD2 (ENSSFOG00015011712) oclna (ENSSFOG00015011809) ERAP1 (ENSSFOG00015011891) PIGO (ENSSFOG00015033071) stoml2 (ENSSFOG00015011937) Clupeocephala ANCESTRAL SPECIES 80 ENSGT00940000153372.B ENSGT00940000157820.a.a ENSGT00390000006030.d.b ENSGT00940000158873 ENSGT00940000161418 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372 ENSGT00940000160516 ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000159913.a.b ENSGT00940000156031.f ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00390000000924 #31 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00940000155864.b.c.a ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00390000005989.b.b ENSGT00940000155782 ENSGT00390000009948.d ENSGT00940000164226.a.b ENSGT00390000011010.a.a ENSGT00940000161253 Euteleosteomorpha ANCESTRAL SPECIES 93 ENSGT00940000157488.h ENSGT00950000183012.A.a.c.a ENSGT00950000182825.B ENSGT00940000158873 ENSGT00940000161418 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372 ENSGT00940000160516 ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000159913.a.b ENSGT00940000156031.f ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544.a ENSGT00390000000924 #31 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00940000154856.B.c ENSGT00940000161915.b ENSGT00940000155657 ENSGT00940000155864.b.c.a ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00390000005989.b.b ENSGT00940000155860.b ENSGT00940000154314.a Acanthomorphata ANCESTRAL SPECIES 15 ENSGT00550000074946 ENSGT00940000153372.B ENSGT00940000153745.a.b ENSGT00940000157488.h ENSGT00940000158873 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372 ENSGT00940000160516 ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000159913.a.b ENSGT00940000156031.f ENSGT00940000155411.d ##9 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544.a ENSGT00950000183041.C #35 ENSGT00940000154856.B.c ENSGT00940000161915.b ENSGT00940000155657 ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00390000005989.b.b ENSGT00940000155860.b ENSGT00940000154314.a ENSGT00390000009948.d ENSGT00940000155782 ENSGT00940000164226.a.b Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00940000153372.B ENSGT00940000153745.a.b ENSGT00940000157488.h ENSGT00940000158873 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372 ENSGT00940000160516 ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000159913.a.b ENSGT00940000177258 ENSGT00940000156031.f ENSGT00940000155411.d ##9 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544.a ENSGT00950000183041.C #35 ENSGT00940000154856.B.c ENSGT00940000161915.b ENSGT00940000155657 ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00390000005989.b.b ENSGT00940000155860.b ENSGT00940000154314.a ENSGT00390000009948.d ENSGT00940000155782 ENSGT00940000164226.a.b Pinecone sodierfish MODERN SPECIES 3 SLC4A5 (ENSMMDG00005005622) ENSMMDG00005005626 SEZ6L (ENSMMDG00005005638) ENSMMDG00005005661 grk3 (ENSMMDG00005005711) cryba4 (ENSMMDG00005008575) crybb1 (ENSMMDG00005008577) acads (ENSMMDG00005008579) cldn5b (ENSMMDG00005008612) SEPTIN5 (ENSMMDG00005008619) ENSMMDG00005008947 MCTP1 (ENSMMDG00005008961) ENSMMDG00005009231 ##9 ENSMMDG00005009233 ##16 ENSMMDG00005009236 EDIL3 (ENSMMDG00005009239) #22 HAPLN1 (ENSMMDG00005009243) #23 vcanb (ENSMMDG00005009264) #24 xrcc4 (ENSMMDG00005009267) zcchc9 (ENSMMDG00005009269) #35 ENSMMDG00005009272 adra2b (ENSMMDG00005009275) wdr45 (ENSMMDG00005009282) ENSMMDG00005009308 ENSMMDG00005009317 stc1l (ENSMMDG00005009482) FGFR1 (ENSMMDG00005009617) kctd9b (ENSMMDG00005020743) marchf5l (ENSMMDG00005020746) ACTR1B (ENSMMDG00005020749) npy8ar (ENSMMDG00005020758) Cod MODERN SPECIES 17 e2f7 (ENSGMOG00000016169) ENSGMOG00000033866 dclre1c (ENSGMOG00000016321) ENSGMOG00000025224 dmtf1 (ENSGMOG00000033129) ENSGMOG00000013248 ENSGMOG00000002874 ENSGMOG00000030831 ENSGMOG00000017269 ENSGMOG00000031824 ENSGMOG00000026956 ENSGMOG00000017226 ENSGMOG00000017202 ##9 ENSGMOG00000032647 ##16 ENSGMOG00000009774 EDIL3 (ENSGMOG00000025048) #22 ENSGMOG00000000804 #23 vcanb (ENSGMOG00000027164) #24 ENSGMOG00000030610 ENSGMOG00000016274 wdr45 (ENSGMOG00000016140) ENSGMOG00000033649 ENSGMOG00000033980 ENSGMOG00000026568 stc1l (ENSGMOG00000030223) ENSGMOG00000012944 kctd9b (ENSGMOG00000014201) ENSGMOG00000028456 ENSGMOG00000017491 npy8ar (ENSGMOG00000017513) ENSGMOG00000030473 Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00940000163680 ENSGT00940000158873 ENSGT00940000161418 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372 ENSGT00940000160516 ENSGT00940000158866 ENSGT00980000199088 ENSGT00940000161769.b.b ENSGT00940000159913.a.b ENSGT00940000156031.f ENSGT00940000155411.d ##9 ENSGT00940000157995 #15 ENSGT00940000157492.a.c ##16 ENSGT00940000158144.b #22 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000158144.b.a #22 Huchen MODERN SPECIES 8531 ENSHHUG00000008930 #22 ENSHHUG00000008925 ENSHHUG00000008912 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000158144.b.a #22 Salmo ANCESTRAL SPECIES ENSGT00940000158144.b.a #22 Atlantic salmon MODERN SPECIES 16 ENSSSAG00000071833 ENSSSAG00000102858 ENSSSAG00000103365 ENSSSAG00000075041 ENSSSAG00000092887 ENSSSAG00000071823 ENSSSAG00000116580 ENSSSAG00000110885 ydjc (ENSSSAG00000071811) sdf2l1 (ENSSSAG00000071808) ENSSSAG00000109629 ENSSSAG00000106592 ENSSSAG00000071600 ENSSSAG00000071801 ENSSSAG00000110758 ENSSSAG00000102448 #22 ENSSSAG00000115022 ENSSSAG00000087881 ENSSSAG00000071584 ENSSSAG00000103305 cnot6l (ENSSSAG00000092108) ENSSSAG00000071567 fras1 (ENSSSAG00000053053) ENSSSAG00000088603 ENSSSAG00000105033 fgf5 (ENSSSAG00000096652) prdm8b (ENSSSAG00000053004) antxr2a (ENSSSAG00000116038) ENSSSAG00000120097 bmp2k (ENSSSAG00000053206) ENSSSAG00000103697 Salmoninae ANCESTRAL SPECIES 194 ENSGT00940000158866.h.a ENSGT00980000199088.e ENSGT00980000199088.f ENSGT00940000161769.b.a.y.b ENSGT00940000177258 ENSGT00940000156031.f ENSGT00940000160879.k.b ENSGT00940000155411.d.f ##9 ENSGT00940000157995.k #15 ENSGT00940000157492.a.d ##16 ENSGT00940000158144.b.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r.x #24 ENSGT00940000166544.a ENSGT00940000155186.i.b #26 ENSGT00940000156102.r.w #24 ENSGT00940000155186.i.a #26 ENSGT00390000000924 #31 ENSGT00940000160328.d #34 ENSGT00950000183041.C #35 ENSGT00940000161915.b.a ENSGT00940000155657.e ENSGT00940000155864.b.c.a.b ENSGT00410000025802.a ENSGT00940000154704.c.c.l ENSGT00390000005989.b.b.e Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000158866.h.a ENSGT00980000199088.e ENSGT00980000199088.f ENSGT00940000161769.b.a.y.b ENSGT00940000177258 ENSGT00940000156031.f ENSGT00940000160879.k.b ENSGT00940000155411.d.f ##9 ENSGT00940000157995.k #15 ENSGT00940000157492.a.d ##16 ENSGT00940000158144.b.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r.x #24 ENSGT00940000166544.a ENSGT00940000155186.i.b #26 ENSGT00390000000924 #31 ENSGT00940000160328.d #34 ENSGT00950000183041.C #35 ENSGT00940000161915.b.a ENSGT00940000155657.e ENSGT00940000155864.b.c.a.b ENSGT00410000025802.a ENSGT00940000154704.c.c.l ENSGT00390000005989.b.b.e ENSGT00940000155860.b.b ENSGT00390000009948.d.j Salmo ANCESTRAL SPECIES 1 ENSGT00940000158873.d ENSGT00940000161418.bb.b ENSGT00940000157699.u ENSGT00940000160372.d ENSGT00940000160516.f ENSGT00940000158866.h.a ENSGT00980000199088.e ENSGT00980000199088.f ENSGT00940000161769.b.b.a ENSGT00940000177258 ENSGT00940000156031.f ENSGT00940000160879.k.b ENSGT00940000155411.d.f ##9 ENSGT00940000157995.k #15 ENSGT00940000157492.a.d ##16 ENSGT00940000158144.b.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r.x #24 ENSGT00940000166544.a ENSGT00940000155186.i.b #26 ENSGT00390000000924.c #31 ENSGT00940000160328.d #34 ENSGT00950000183041.C #35 ENSGT00940000161915.b.a ENSGT00940000155657.e ENSGT00940000155864.b.c.a.b ENSGT00410000025802.a ENSGT00940000154704.c.c.l ENSGT00390000005989.b.b.e ENSGT00940000155860.b.b ENSGT00390000009948.d.j River trout MODERN SPECIES 3 tuba7l (ENSSTUG00000024528) SEZ6L (ENSSTUG00000002133) npm2b (ENSSTUG00000002755) ENSSTUG00000002770 cryba4 (ENSSTUG00000002792) crybb1 (ENSSTUG00000002811) acads (ENSSTUG00000002921) ENSSTUG00000004549 ENSSTUG00000004558 cldn5b (ENSSTUG00000004562) MCTP1 (ENSSTUG00000004579) TLR8 (ENSSTUG00000004738) ENSSTUG00000004752 ##9 cetn3 (ENSSTUG00000004851) #15 mef2ca (ENSSTUG00000004885) ##16 EDIL3 (ENSSTUG00000004912) #22 HAPLN1 (ENSSTUG00000004934) #23 ENSSTUG00000004946 #24 xrcc4 (ENSSTUG00000005004) tmem167a (ENSSTUG00000005008) #26 atg10 (ENSSTUG00000005057) #31 ENSSTUG00000005062 #34 zcchc9 (ENSSTUG00000005085) #35 adra2b (ENSSTUG00000005098) wdr45 (ENSSTUG00000005122) ENSSTUG00000005232 ENSSTUG00000005240 ENSSTUG00000005248 ENSSTUG00000005265 stc1l (ENSSTUG00000005489) FGFR1 (ENSSTUG00000005535) Atlantic salmon MODERN SPECIES 2 cryba4 (ENSSSAG00000052021) crybb1 (ENSSSAG00000052013) acads (ENSSSAG00000052029) ENSSSAG00000052077 ENSSSAG00000118288 cldn5b (ENSSSAG00000096991) ENSSSAG00000095668 ENSSSAG00000115367 ENSSSAG00000052157 TLR8b2 (ENSSSAG00000054795) ENSSSAG00000087388 ENSSSAG00000083694 ##9 ENSSSAG00000098199 cetn3 (ENSSSAG00000087654) #15 mef2ca (ENSSSAG00000054817) ##16 EDIL3 (ENSSSAG00000082821) #22 hapln1 (ENSSSAG00000055311) #23 vcanb (ENSSSAG00000074509) #24 xrcc4 (ENSSSAG00000055318) tmem167a (ENSSSAG00000094567) #26 atg10 (ENSSSAG00000055353) #31 ENSSSAG00000055358 #34 ENSSSAG00000083738 zcchc9 (ENSSSAG00000055365) #35 ENSSSAG00000104119 wdr45 (ENSSSAG00000055384) ENSSSAG00000055482 ENSSSAG00000055494 ENSSSAG00000055485 stc1l (ENSSSAG00000055553) ENSSSAG00000055992 Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00940000158873.d ENSGT00940000161418.bb.b ENSGT00940000157699.v.a.a ENSGT00940000160372.c.a ENSGT00940000160516.f ENSGT00940000158866.h.a ENSGT00980000199088.e ENSGT00980000199088.f ENSGT00940000161769.b.a.y.b ENSGT00940000162556.A.a.b ENSGT00940000156031.f ENSGT00940000160879.k.b ENSGT00940000155411.d.f ##9 ENSGT00940000157995.k #15 ENSGT00940000157492.a.d ##16 ENSGT00940000158144.b.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r.x #24 ENSGT00940000166544.a ENSGT00940000155186.i.b #26 ENSGT00390000000924 #31 ENSGT00940000160328.d #34 ENSGT00950000183041.C #35 ENSGT00940000161915.b.a ENSGT00940000155657.e ENSGT00940000155864.b.c.a.b ENSGT00410000025802.a ENSGT00940000154704.c.c.l ENSGT00390000005989.b.b.e ENSGT00940000155860.b.b ENSGT00390000009948.d.j Rainbow trout MODERN SPECIES 364 ENSOMYG00000062823 ENSOMYG00000075709 ENSOMYG00000052676 ENSOMYG00000026800 cryba4 (ENSOMYG00000071755) acads (ENSOMYG00000027020) ENSOMYG00000048933 ENSOMYG00000027359 ENSOMYG00000027378 ENSOMYG00000027421 ENSOMYG00000027532 ENSOMYG00000071765 ##9 ENSOMYG00000027558 cetn3 (ENSOMYG00000027567) #15 mef2ca (ENSOMYG00000071179) ##16 EDIL3 (ENSOMYG00000027595) #22 HAPLN1 (ENSOMYG00000027602) #23 vcanb (ENSOMYG00000051559) #24 xrcc4 (ENSOMYG00000027632) tmem167a (ENSOMYG00000027678) #26 atg10 (ENSOMYG00000027725) #31 ENSOMYG00000071362 #34 ACOT12 (ENSOMYG00000027786) #34 zcchc9 (ENSOMYG00000027844) #35 ENSOMYG00000056125 wdr45 (ENSOMYG00000073998) ENSOMYG00000049085 ENSOMYG00000062772 ENSOMYG00000028000 ENSOMYG00000028234 ENSOMYG00000028393 Oncorhynchus_a ANCESTRAL SPECIES 47 ENSGT00950000182825.B.g.a ENSGT00940000158873.d ENSGT00940000161418.bb.b ENSGT00940000160372.c.a ENSGT00940000160516.f ENSGT00940000158866.h.a ENSGT00980000199088.e ENSGT00980000199088.f ENSGT00940000161769.b.a.y.b ENSGT00940000162556.A.a.b ENSGT00940000156031.f ENSGT00940000160879.k.b ENSGT00940000155411.d.f ##9 ENSGT00940000157995.k #15 ENSGT00940000157492.a.d ##16 ENSGT00940000158144.b.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r.x #24 ENSGT00940000166544.a ENSGT00940000155186.i.b #26 ENSGT00390000000924 #31 ENSGT00950000183041.C #35 ENSGT00940000161915.b.a ENSGT00940000155657.e ENSGT00940000155864.b.c.a.b ENSGT00410000025802.a ENSGT00940000154704.c.c.l ENSGT00390000005989.b.b.e ENSGT00940000155860.b.b ENSGT00390000009948.d.j ENSGT00940000155782.i.b Chinook salmon MODERN SPECIES 26 SEZ6L (ENSOTSG00005016003) npm2b (ENSOTSG00005015999) cryba4 (ENSOTSG00005015996) crybb1 (ENSOTSG00005015995) crybb1 (ENSOTSG00005015994) acads (ENSOTSG00005013154) ENSOTSG00005013150 ENSOTSG00005013149 cldn5a (ENSOTSG00005015208) ENSOTSG00005015205 ENSOTSG00005015204 MCTP1 (ENSOTSG00005015203) TLR8 (ENSOTSG00005015202) ENSOTSG00005015200 ##9 cetn3 (ENSOTSG00005015199) #15 EDIL3 (ENSOTSG00005015197) #22 HAPLN1 (ENSOTSG00005015196) #23 vcanb (ENSOTSG00005015195) #24 xrcc4 (ENSOTSG00005015194) tmem167a (ENSOTSG00005015193) #26 atg10 (ENSOTSG00005015192) #31 zcchc9 (ENSOTSG00005015191) #35 adra2b (ENSOTSG00005015189) wdr45 (ENSOTSG00005015172) LAGE3 (ENSOTSG00005015171) ENSOTSG00005015170 stc1l (ENSOTSG00005015169) FGFR1 (ENSOTSG00005013520) marchf5l (ENSOTSG00005013403) actr1b (ENSOTSG00005013187) npy8ar (ENSOTSG00005013184) Coho salmon MODERN SPECIES 21 SEZ6L (ENSOKIG00005045131) ENSOKIG00005045102 cryba4 (ENSOKIG00005045092) crybb1 (ENSOKIG00005045084) acads (ENSOKIG00005044571) ENSOKIG00005044529 ENSOKIG00005044522 ENSOKIG00005044508 CLDN5 (ENSOKIG00005044493) MCTP1 (ENSOKIG00005043744) TLR8 (ENSOKIG00005043622) ENSOKIG00005043502 ##9 cetn3 (ENSOKIG00005043445) #15 ENSOKIG00005043426 mef2ca (ENSOKIG00005043339) ##16 EDIL3 (ENSOKIG00005043265) #22 HAPLN1 (ENSOKIG00005043241) #23 vcanb (ENSOKIG00005043160) #24 xrcc4 (ENSOKIG00005043127) tmem167a (ENSOKIG00005043068) #26 ENSOKIG00005043057 atg10 (ENSOKIG00005043045) #31 zcchc9 (ENSOKIG00005043031) #35 ENSOKIG00005043013 wdr45 (ENSOKIG00005042848) ENSOKIG00005042716 LAGE3 (ENSOKIG00005042705) ENSOKIG00005042083 stc1l (ENSOKIG00005041995) FGFR1 (ENSOKIG00005041930) ENSOKIG00005041858 Huchen MODERN SPECIES 135 ENSHHUG00000023399 ENSHHUG00000023391 grk3 (ENSHHUG00000023226) cryba4 (ENSHHUG00000023224) crybb1 (ENSHHUG00000023222) acads (ENSHHUG00000023218) ENSHHUG00000023217 ENSHHUG00000023213 cldn5a (ENSHHUG00000023211) SEPTIN5 (ENSHHUG00000023204) MCTP1 (ENSHHUG00000023158) TLR8 (ENSHHUG00000023141) ENSHHUG00000023132 ##9 cetn3 (ENSHHUG00000023098) #15 mef2ca (ENSHHUG00000023079) ##16 EDIL3 (ENSHHUG00000023069) #22 HAPLN1 (ENSHHUG00000023062) #23 ENSHHUG00000023059 #24 Northern pike MODERN SPECIES 13 SEZ6L (ENSELUG00000004781) npm2b (ENSELUG00000004822) MYO18B (ENSELUG00000004911) grk3 (ENSELUG00000004954) crybb1 (ENSELUG00000004983) cryba4 (ENSELUG00000004968) acads (ENSELUG00000005013) ENSELUG00000005032 cldn5b (ENSELUG00000028607) SEPTIN5 (ENSELUG00000005164) MCTP1 (ENSELUG00000005234) TLR8 (ENSELUG00000005260) ENSELUG00000005278 ##9 cetn3 (ENSELUG00000005291) #15 mef2ca (ENSELUG00000005368) ##16 EDIL3 (ENSELUG00000024775) #22 HAPLN1 (ENSELUG00000005422) #23 vcanb (ENSELUG00000000149) #24 xrcc4 (ENSELUG00000005582) tmem167a (ENSELUG00000005534) #26 atg10 (ENSELUG00000027833) #31 zcchc9 (ENSELUG00000005654) #35 ENSELUG00000005682 adra2b (ENSELUG00000005695) wdr45 (ENSELUG00000005718) ENSELUG00000005733 ENSELUG00000000175 ENSELUG00000028519 ENSELUG00000005814 stc1l (ENSELUG00000005845) FGFR1 (ENSELUG00000005898) Otomorpha ANCESTRAL SPECIES 63 ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00940000158918.h ENSGT00390000005989.b.b ENSGT00940000155860.a.f ENSGT00940000154314.a Otophysi ANCESTRAL SPECIES 86 ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00940000155864.b.c.b.d ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00940000158918.h ENSGT00390000005989.b.b ENSGT00940000155860.a.f Cyprinoidei ANCESTRAL SPECIES 6 ENSGT00940000158873 ENSGT00940000161418 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372 ENSGT00940000160516 ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000159913.b ENSGT00940000156031.f ENSGT00940000160879 ENSGT00940000157876.c ENSGT00940000155411.c.n #9 ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00940000168869 ENSGT00940000155657 ENSGT00940000155864.b.c.b.d ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00940000158918.h ENSGT00390000005989.b.b ENSGT00940000155860.a.f Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 10 ENSGT00390000006030.d.b.a ENSGT00940000158873.b ENSGT00940000161418.q.b ENSGT00940000157699.q ENSGT00940000160372.i ENSGT00940000160516.a ENSGT00940000158866.d ENSGT00940000161769.b.b.d ENSGT00940000159913.b.a ENSGT00940000156031.f.b ENSGT00940000157876.c.b ENSGT00940000155411.c.n.a.a #9 ENSGT00940000157995.n.a #15 ENSGT00940000157492.a.b ##16 ENSGT00940000155846.g.a #19 ENSGT00940000158144.b.c #22 ENSGT00940000159267.g #23 ENSGT00940000156102.r.c #24 ENSGT00940000166544.c ENSGT00940000155186.n #26 ENSGT00390000000924.b #31 ENSGT00950000183049.E.s.a ##33 ENSGT00940000160328.a #34 ENSGT00950000183041.C.o.a #35 ENSGT00940000154856.B.c.b ENSGT00940000161915.c.a ENSGT00950000183041.C.o.b #35 ENSGT00940000154856.B.c.a ENSGT00940000161915.c.b ENSGT00940000155657.a ENSGT00940000155864.b.c.b.d.a Goldfish DUPLICATION Goldfish MODERN SPECIES 69 RASA1 (ENSCARG00000067764) #19 ENSCARG00000067743 EDIL3 (ENSCARG00000067706) #22 HAPLN1 (ENSCARG00000067691) #23 Goldfish MODERN SPECIES 28 scarb1 (ENSCARG00000051925) tpst2 (ENSCARG00000051717) npm2b (ENSCARG00000051706) SEZ6L (ENSCARG00000049171) grk3 (ENSCARG00000045547) cryba4 (ENSCARG00000045371) crybb1 (ENSCARG00000045343) cldn5b (ENSCARG00000045334) septin5b (ENSCARG00000043676) MCTP1 (ENSCARG00000043019) nr2f1b (ENSCARG00000042908) arrdc3b (ENSCARG00000042826) #9 cetn3 (ENSCARG00000042791) #15 mef2ca (ENSCARG00000042349) ##16 RASA1 (ENSCARG00000041194) #19 EDIL3 (ENSCARG00000041091) #22 HAPLN1 (ENSCARG00000041068) #23 vcanb (ENSCARG00000040972) #24 ENSCARG00000040945 zgc:100918 (ENSCARG00000040922) wdr45 (ENSCARG00000040072) ANTXR1 (ENSCARG00000040035) npffr1l1 (ENSCARG00000040011) bmp1b (ENSCARG00000039583) trim69 (ENSCARG00000039527) pcna (ENSCARG00000039503) cetn3 (ENSCARG00000039462) #15 arrdc3b (ENSCARG00000039421) #9 nr2f1b (ENSCARG00000039352) MCTP1 (ENSCARG00000038983) xrcc4 (ENSCARG00000038909) Cyprininae_a ANCESTRAL SPECIES 11 ENSGT00390000006030.d.b.a ENSGT00940000158873.b ENSGT00940000161418.q.b ENSGT00940000158067.b.b ENSGT00940000157699.q ENSGT00940000160372.i ENSGT00940000160516.a ENSGT00940000158866.d ENSGT00940000159913.b.a ENSGT00940000156031.f.b ENSGT00940000157876.c.b ENSGT00940000155411.c.n.a.a #9 ENSGT00940000157995.n.a #15 ENSGT00940000157492.a.b ##16 ENSGT00940000155846.g.a #19 ENSGT00940000158144.b.c #22 ENSGT00940000159267.g #23 ENSGT00940000156102.r.c #24 ENSGT00940000166544.c ENSGT00940000155186.n #26 ENSGT00390000000924.b #31 ENSGT00950000183049.E.s.a ##33 ENSGT00940000160328.a #34 ENSGT00950000183041.C.p #35 ENSGT00940000154856.B.c.a ENSGT00940000161915.c.b ENSGT00940000155657.a ENSGT00940000155864.b.c.b.d.a ENSGT00410000025802.c ENSGT00940000154704.c.c ENSGT00940000158918.h.a Common carp reference MODERN SPECIES 32 tpst2 (ENSCCRG00000002476) SEZ6L (ENSCCRG00000002430) npm2b (ENSCCRG00000035498) MYO18B (ENSCCRG00000035521) grk3 (ENSCCRG00000035554) cryba4 (ENSCCRG00000022421) crybb1 (ENSCCRG00000013202) acads (ENSCCRG00000075180) septin5b (ENSCCRG00000061317) ENSCCRG00000069523 nr2f1b (ENSCCRG00000033186) arrdc3b (ENSCCRG00000065047) #9 cetn3 (ENSCCRG00000026991) #15 mef2ca (ENSCCRG00000026222) ##16 RASA1 (ENSCCRG00000008509) #19 EDIL3 (ENSCCRG00000078854) #22 HAPLN1 (ENSCCRG00000076688) #23 vcanb (ENSCCRG00000008487) #24 xrcc4 (ENSCCRG00000008481) tmem167a (ENSCCRG00000008476) #26 atg10 (ENSCCRG00000008270) #31 ENSCCRG00000031992 ##33 ACOT12 (ENSCCRG00000031855) #34 zcchc9 (ENSCCRG00000082648) #35 ENSCCRG00000056811 ENSCCRG00000006503 wdr45 (ENSCCRG00000016527) zgc:100918 (ENSCCRG00000016691) ENSCCRG00000058276 ENSCCRG00000011293 ENSCCRG00000013181 Golden-line barbel MODERN SPECIES 109 npm2b (ENSSGRG00000017384) MYO18B (ENSSGRG00000017385) grk3 (ENSSGRG00000017438) ENSSGRG00000019302 acads (ENSSGRG00000019304) cryba4 (ENSSGRG00000019543) septin5b (ENSSGRG00000019547) ENSSGRG00000019598 MCTP1 (ENSSGRG00000019600) TLR8 (ENSSGRG00000019622) nr2f1b (ENSSGRG00000019623) arrdc3b (ENSSGRG00000019667) #9 cetn3 (ENSSGRG00000019691) #15 mef2ca (ENSSGRG00000019698) ##16 RASA1 (ENSSGRG00000019805) #19 EDIL3 (ENSSGRG00000019809) #22 HAPLN1 (ENSSGRG00000019810) #23 vcanb (ENSSGRG00000019813) #24 xrcc4 (ENSSGRG00000019816) tmem167a (ENSSGRG00000019818) #26 atg10 (ENSSGRG00000019825) #31 ENSSGRG00000019844 ##33 ACOT12 (ENSSGRG00000019871) #34 zcchc9 (ENSSGRG00000020031) #35 ENSSGRG00000020033 ADRA2B (ENSSGRG00000020034) wdr45 (ENSSGRG00000020041) zgc:100918 (ENSSGRG00000020044) ENSSGRG00000020069 ENSSGRG00000020070 ENSSGRG00000020072 Cyprininae ANCESTRAL SPECIES 68 ENSGT00940000161418.q.a ENSGT00940000158067.b ENSGT00940000157699.r ENSGT00940000160372.j ENSGT00940000160516.b ENSGT00940000158866.c ENSGT00940000161769.b.b.c ENSGT00940000159913.b.b ENSGT00940000156031.f.a ENSGT00940000160879 ENSGT00940000157876.c.a ENSGT00940000155411.c.n.a.b #9 ENSGT00940000157995.n.b #15 ENSGT00940000157492.a.a ##16 ENSGT00940000155846.g.b #19 ENSGT00940000158144.b.d #22 ENSGT00940000159267.h #23 ENSGT00940000156102.r.d #24 ENSGT00940000166544.d ENSGT00940000155186.m #26 ENSGT00390000000924.a #31 ENSGT00950000183049.E.s.b ##33 ENSGT00940000160328.b #34 ENSGT00940000155657.b ENSGT00940000155864.b.c.b.d.b ENSGT00410000025802.d ENSGT00940000158918.h.b ENSGT00390000005989.b.b.a ENSGT00940000155860.a.f.a ENSGT00940000154314.a.a ENSGT00940000155782.k Goldfish MODERN SPECIES 1 npm2b (ENSCARG00000016967) ENSCARG00000016827 grk3 (ENSCARG00000015511) cryba4 (ENSCARG00000015473) crybb1 (ENSCARG00000015470) acads (ENSCARG00000015017) cldn5b (ENSCARG00000014993) septin5b (ENSCARG00000014229) MCTP1 (ENSCARG00000014177) TLR8 (ENSCARG00000014169) nr2f1b (ENSCARG00000014116) arrdc3b (ENSCARG00000014095) #9 cetn3 (ENSCARG00000014082) #15 mef2ca (ENSCARG00000013939) ##16 RASA1 (ENSCARG00000013635) #19 EDIL3 (ENSCARG00000013587) #22 HAPLN1 (ENSCARG00000013584) #23 vcanb (ENSCARG00000013348) #24 xrcc4 (ENSCARG00000013335) tmem167a (ENSCARG00000013331) #26 ENSCARG00000013328 atg10 (ENSCARG00000013322) #31 ENSCARG00000013318 zgc:113625 (ENSCARG00000013315) pcna (ENSCARG00000013311) trim69 (ENSCARG00000013304) bmp1b (ENSCARG00000013276) ANTXR1 (ENSCARG00000013233) AAK1 (ENSCARG00000011677) anxa4 (ENSCARG00000011483) adrb3b (ENSCARG00000011478) Cyprininae_a ANCESTRAL SPECIES 61 ENSGT00940000161418.q.a ENSGT00940000158067.b.a ENSGT00940000157699.r ENSGT00940000160516.b ENSGT00940000160372.j ENSGT00940000158866.c ENSGT00940000161769.b.b.c ENSGT00940000159913.b.b ENSGT00940000156031.f.a ENSGT00940000160879 ENSGT00940000157876.c.a ENSGT00940000155411.c.n.a.b #9 ENSGT00940000157995.n.b #15 ENSGT00940000157492.a.a ##16 ENSGT00940000155846.g.b #19 ENSGT00940000158144.b.d #22 ENSGT00940000159267.h #23 ENSGT00940000156102.r.d #24 ENSGT00940000166544.d ENSGT00940000155186.m #26 ENSGT00390000000924.a #31 ENSGT00950000183049.E.s.b ##33 ENSGT00940000160328.b #34 ENSGT00950000183041.C.o.a #35 ENSGT00940000161915.c.a ENSGT00940000155657.b ENSGT00940000155864.b.c.b.d.b ENSGT00410000025802.d ENSGT00940000158918.h.b ENSGT00390000005989.b.b.a ENSGT00940000155860.a.f.a Common carp reference MODERN SPECIES 24 ENSCCRG00000035511 npm2b (ENSCCRG00000061108) GRK3 (ENSCCRG00000078486) ENSCCRG00000022416 cryba4 (ENSCCRG00000036731) acads (ENSCCRG00000069508) septin5b (ENSCCRG00000066247) cldn5b (ENSCCRG00000078958) ENSCCRG00000061964 ENSCCRG00000065631 nr2f1b (ENSCCRG00000027087) arrdc3b (ENSCCRG00000027018) #9 cetn3 (ENSCCRG00000078704) #15 mef2ca (ENSCCRG00000072051) ##16 RASA1 (ENSCCRG00000026100) #19 EDIL3 (ENSCCRG00000008499) #22 HAPLN1 (ENSCCRG00000053811) #23 vcanb (ENSCCRG00000055950) #24 xrcc4 (ENSCCRG00000025994) tmem167a (ENSCCRG00000025989) #26 atg10 (ENSCCRG00000025815) #31 ENSCCRG00000061618 ENSCCRG00000016513 ##33 ENSCCRG00000016525 ENSCCRG00000016522 wdr45 (ENSCCRG00000011199) zgc:100918 (ENSCCRG00000011264) ENSCCRG00000058290 ENSCCRG00000057537 stc1l (ENSCCRG00000066229) fgfr1b (ENSCCRG00000017009) Golden-line barbel MODERN SPECIES 317 nr2f1b (ENSSGRG00000042102) arrdc3b (ENSSGRG00000042095) #9 cetn3 (ENSSGRG00000042094) #15 mef2ca (ENSSGRG00000042093) ##16 RASA1 (ENSSGRG00000041568) #19 EDIL3 (ENSSGRG00000041562) #22 HAPLN1 (ENSSGRG00000041560) #23 ENSSGRG00000041557 #24 ENSSGRG00000041554 #24 xrcc4 (ENSSGRG00000041552) tmem167a (ENSSGRG00000041535) #26 atg10 (ENSSGRG00000041533) #31 ENSSGRG00000040674 ##33 ACOT12 (ENSSGRG00000040657) #34 zcchc9 (ENSSGRG00000040656) #35 ADRA2B (ENSSGRG00000040655) ENSSGRG00000040654 ENSSGRG00000040653 zgc:100918 (ENSSGRG00000040591) RHOBTB2 (ENSSGRG00000040420) stc1l (ENSSGRG00000040411) Zebrafish MODERN SPECIES 1 ENSDARG00000102803 grk3 (ENSDARG00000104094) cryba4 (ENSDARG00000024548) crybb1 (ENSDARG00000068507) acads (ENSDARG00000030781) cldn5b (ENSDARG00000014059) septin5b (ENSDARG00000036031) MCTP1 (ENSDARG00000060871) tlr8b (ENSDARG00000073675) nr2f1b (ENSDARG00000017168) arrdc3b (ENSDARG00000036028) #9 cetn3 (ENSDARG00000011825) #15 mef2ca (ENSDARG00000029764) ##16 ENSDARG00000098512 RASA1 (ENSDARG00000073665) #19 EDIL3 (ENSDARG00000060877) #22 HAPLN1 (ENSDARG00000068516) #23 vcanb (ENSDARG00000009401) #24 tmem167a (ENSDARG00000035914) #26 xrcc4 (ENSDARG00000010732) atg10 (ENSDARG00000104846) #31 ENSDARG00000099727 ##33 ACOT12 (ENSDARG00000054534) #34 zcchc9 (ENSDARG00000007531) #35 ENSDARG00000068593 ENSDARG00000116988 wdr45 (ENSDARG00000090219) zgc:100918 (ENSDARG00000087243) ENSDARG00000116344 RHOBTB2 (ENSDARG00000089340) stc1l (ENSDARG00000058476) Characiphysae ANCESTRAL SPECIES 204 ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00950000183041.C #35 ENSGT00940000155657 ENSGT00410000025802 ENSGT00390000005989.b.b Characiphysae_b ANCESTRAL SPECIES 226 ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00950000183041.C #35 ENSGT00940000155657 ENSGT00410000025802 ENSGT00390000005989.b.b Characoidei ANCESTRAL SPECIES 35 ENSGT00390000006030.d.b ENSGT00940000158873 ENSGT00940000161418 ENSGT00940000158067.b ENSGT00940000157699.o ENSGT00940000160372 ENSGT00940000160516 ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000159913.a.b ENSGT00940000156031.f ENSGT00940000160879 ENSGT00940000157876.c ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.q.b #24 ENSGT00940000166014 ENSGT00940000164012.C ENSGT00950000183049.E ##33 ENSGT01050000244840.A.a.b.e ENSGT00950000183076.a.b.a ENSGT01050000244840.A.b.b.a ENSGT00950000182940.b.b.e ENSGT00940000164571 ENSGT00940000154170.A ENSGT00940000156667 ENSGT00940000157242.a.a ENSGT00530000067979 ENSGT00940000166272 Red-bellied piranha MODERN SPECIES 29 ENSPNAG00000009405 npm2b (ENSPNAG00000001303) grk3 (ENSPNAG00000001299) cryba4 (ENSPNAG00000009056) crybb1 (ENSPNAG00000009041) acads (ENSPNAG00000009019) cldn5b (ENSPNAG00000008978) septin5b (ENSPNAG00000001270) MCTP1 (ENSPNAG00000001256) TLR8 (ENSPNAG00000008909) nr2f1b (ENSPNAG00000008902) arrdc3b (ENSPNAG00000008896) #9 cetn3 (ENSPNAG00000001230) #15 mef2ca (ENSPNAG00000008875) ##16 RASA1 (ENSPNAG00000008846) #19 EDIL3 (ENSPNAG00000008791) #22 HAPLN1 (ENSPNAG00000008773) #23 vcanb (ENSPNAG00000008733) #24 xrcc4 (ENSPNAG00000001166) tmem167a (ENSPNAG00000008703) #26 atg10 (ENSPNAG00000008684) #31 zcchc9 (ENSPNAG00000008675) #35 wdr45 (ENSPNAG00000008648) ENSPNAG00000008615 stc1l (ENSPNAG00000008600) bop1 (ENSPNAG00000008525) scxa (ENSPNAG00000008512) hsf1 (ENSPNAG00000001048) si:ch211-80h18.1 (ENSPNAG00000000901) ENSPNAG00000000874 si:ch211-133n4.6 (ENSPNAG00000008273) Mexicana tetra MODERN SPECIES 1378 npm2b (ENSAMXG00000038475) ENSAMXG00000042494 grk3 (ENSAMXG00000040548) cryba4 (ENSAMXG00000007889) crybb1 (ENSAMXG00000038565) acads (ENSAMXG00000043790) cldn5b (ENSAMXG00000043645) ENSAMXG00000033916 MCTP1 (ENSAMXG00000032688) ENSAMXG00000025614 arrdc3b (ENSAMXG00000035285) #9 cetn3 (ENSAMXG00000033199) #15 mef2ca (ENSAMXG00000037913) ##16 EDIL3 (ENSAMXG00000043126) #22 HAPLN1 (ENSAMXG00000008622) #23 vcanb (ENSAMXG00000008561) #24 xrcc4 (ENSAMXG00000031991) tmem167a (ENSAMXG00000008525) #26 atg10 (ENSAMXG00000029955) #31 zcchc9 (ENSAMXG00000008493) #35 wdr45 (ENSAMXG00000032671) ENSAMXG00000033588 ENSAMXG00000029981 Electric eel MODERN SPECIES 900 EDIL3 (ENSEEEG00000021314) #22 HAPLN1 (ENSEEEG00000021312) #23 vcanb (ENSEEEG00000021311) #24 xrcc4 (ENSEEEG00000021308) tmem167a (ENSEEEG00000021306) #26 atg10 (ENSEEEG00000021305) #31 Clupeiformes ANCESTRAL SPECIES 40 ENSGT00940000161418 ENSGT00940000158067.b ENSGT00940000157699 ENSGT00940000160372 ENSGT00940000160516 ENSGT00940000158866 ENSGT00940000161769.b.b ENSGT00940000159913.b ENSGT00940000177258 ENSGT00940000156031.f ENSGT00940000157876.c.c ENSGT00940000155411.c #9 ENSGT00940000154880 #10 ENSGT00940000157995 #15 ENSGT00940000157492.a ##16 ENSGT00940000158144.b #22 ENSGT00940000159267 #23 ENSGT00940000156102.r #24 ENSGT00940000166544 ENSGT00940000155186 #26 ENSGT00390000000924 #31 ENSGT00940000160328 #34 ENSGT00950000183041.C #35 ENSGT00940000154856.B.c ENSGT00940000155657 ENSGT00940000155864.b.c.b ENSGT00410000025802 ENSGT00940000154704.c.c ENSGT00940000158918.h ENSGT00390000005989.b.b ENSGT00940000155860.a.f Denticle herring MODERN SPECIES 13 SEZ6L (ENSDCDG00000025838) npm2b (ENSDCDG00000027137) MYO18B (ENSDCDG00000027179) grk3 (ENSDCDG00000027740) cryba4 (ENSDCDG00000027872) crybb1 (ENSDCDG00000027874) acads (ENSDCDG00000027883) cldn5b (ENSDCDG00000028331) septin5b (ENSDCDG00000028343) MCTP1 (ENSDCDG00000028926) nr2f1b (ENSDCDG00000028933) arrdc3b (ENSDCDG00000028936) #9 cetn3 (ENSDCDG00000028937) #15 mef2ca (ENSDCDG00000028943) ##16 RASA1 (ENSDCDG00000028992) #19 EDIL3 (ENSDCDG00000029725) #22 HAPLN1 (ENSDCDG00000029728) #23 xrcc4 (ENSDCDG00000029732) tmem167a (ENSDCDG00000029734) #26 atg10 (ENSDCDG00000029735) #31 ENSDCDG00000029761 ##33 ACOT12 (ENSDCDG00000030971) #34 zcchc9 (ENSDCDG00000030974) #35 ENSDCDG00000030976 wdr45 (ENSDCDG00000030977) zgc:100918 (ENSDCDG00000030981) LAGE3 (ENSDCDG00000031010) ENSDCDG00000031014 RHOBTB2 (ENSDCDG00000031245) stc1l (ENSDCDG00000031253) fgfr1b (ENSDCDG00000031519) Atlantic herring MODERN SPECIES 3 ENSCHAG00000015910 ENSCHAG00000015914 c7b (ENSCHAG00000015930) oxct1b (ENSCHAG00000016490) ghrb (ENSCHAG00000019964) ENSCHAG00000019985 gadd45gb.1 (ENSCHAG00000019991) GADD45G (ENSCHAG00000020015) EFNA5 (ENSCHAG00000020078) zgc:103482 (ENSCHAG00000020094) ENSCHAG00000020108 ENSCHAG00000020125 gpat3 (ENSCHAG00000020150) nkx6.1 (ENSCHAG00000020361) RASA1 (ENSCHAG00000020424) #19 EDIL3 (ENSCHAG00000021341) #22 ENSCHAG00000021431 HAPLN1 (ENSCHAG00000021435) #23 vcanb (ENSCHAG00000021438) #24 xrcc4 (ENSCHAG00000021471) ENSCHAG00000021513 ##33 ACOT12 (ENSCHAG00000021583) #34 zcchc9 (ENSCHAG00000021590) #35 ENSCHAG00000021598 ADRA2B (ENSCHAG00000021606) wdr45 (ENSCHAG00000021622) zgc:100918 (ENSCHAG00000021736) ENSCHAG00000021793 ENSCHAG00000021814 RHOBTB2 (ENSCHAG00000022446) stc1l (ENSCHAG00000022459) Spotted gar MODERN SPECIES 658 KIAA0825 (ENSLOCG00000001617) fam172a (ENSLOCG00000001629) nr2f1a (ENSLOCG00000001663) ENSLOCG00000001680 #9 arrdc3a (ENSLOCG00000001698) #9 adgrv1 (ENSLOCG00000001716) #10 lysmd3 (ENSLOCG00000001782) #12 ENSLOCG00000001795 mblac2 (ENSLOCG00000001811) #14 cetn3 (ENSLOCG00000001819) #15 mef2cb (ENSLOCG00000001833) #16 tmem161b (ENSLOCG00000001873) #17 ccnh (ENSLOCG00000001902) #18 RASA1 (ENSLOCG00000001929) #19 cox7c (ENSLOCG00000001956) #20 EDIL3 (ENSLOCG00000001965) #22 HAPLN1 (ENSLOCG00000001981) #23 ENSLOCG00000002002 #24 xrcc4 (ENSLOCG00000002026) tmem167a (ENSLOCG00000002040) #26 ENSLOCG00000002054 atg10 (ENSLOCG00000002071) #31 ENSLOCG00000002081 ##33 RASEF (ENSLOCG00000002094) ENSLOCG00000002123 FRMD3 (ENSLOCG00000002132) IDNK (ENSLOCG00000002152) UBQLN1 (ENSLOCG00000002171) gkap1 (ENSLOCG00000002195) KIF27 (ENSLOCG00000002225) zgc:136564 (ENSLOCG00000002249) Reedfish MODERN SPECIES 15 KIAA0825 (ENSECRG00000007788) ENSECRG00000007770 nr2f1a (ENSECRG00000007759) arrdc3a (ENSECRG00000007737) #9 adgrv1 (ENSECRG00000007415) #10 lysmd3 (ENSECRG00000007223) #12 ENSECRG00000007217 mblac2 (ENSECRG00000007206) #14 cetn3 (ENSECRG00000007191) #15 mef2cb (ENSECRG00000007156) #16 ENSECRG00000007132 tmem161b (ENSECRG00000007114) #17 ccnh (ENSECRG00000007084) #18 RASA1 (ENSECRG00000007053) #19 cox7c (ENSECRG00000007032) #20 EDIL3 (ENSECRG00000007012) #22 HAPLN1 (ENSECRG00000006997) #23 ENSECRG00000006901 #24 xrcc4 (ENSECRG00000006852) ENSECRG00000006832 atg10 (ENSECRG00000006810) #31 ENSECRG00000006780 ##33 ACOT12 (ENSECRG00000006759) #34 zcchc9 (ENSECRG00000006748) #35 ckmt2a (ENSECRG00000006733) #36 rasgrf2b (ENSECRG00000006694) #37 msh3 (ENSECRG00000006670) dhfr (ENSECRG00000006658) ankrd34bb (ENSECRG00000006654) fam151b (ENSECRG00000006644) gtf2h2 (ENSECRG00000006628) Elephant shark MODERN SPECIES 1558 tmem161b (ENSCMIG00000007646) #17 ccnh (ENSCMIG00000007737) #18 RASA1 (ENSCMIG00000007837) #19 cox7c (ENSCMIG00000008038) #20 EDIL3 (ENSCMIG00000008045) #22 HAPLN1 (ENSCMIG00000008051) #23 ENSCMIG00000008055 #24 XRCC4 (ENSCMIG00000008062) #25 ENSCMIG00000008064 tmem167a (ENSCMIG00000008065) #26 zcchc9 (ENSCMIG00000008066) #35 SSBP2 (ENSCMIG00000008068) #33 ENSCMIG00000008070 #31 ENSCMIG00000008078 ENSCMIG00000008086 ##36 rasgrf2b (ENSCMIG00000008165) #37 msh3 (ENSCMIG00000008383) ENSCMIG00000008430 ankrd34bb (ENSCMIG00000008432) fam151b (ENSCMIG00000008433) Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00940000158144.c #22 Lamprey MODERN SPECIES 4780 ENSPMAG00000008830 #22 Hagfish MODERN SPECIES 250 ENSEBUG00000008311 ENSEBUG00000016744 ENSEBUG00000003335 ENSEBUG00000015528 ENSEBUG00000002395 ENSEBUG00000005478 agxt2 (ENSEBUG00000012048) ENSEBUG00000010625 exosc3 (ENSEBUG00000015885) ENSEBUG00000016228 odc1 (ENSEBUG00000013338) MYO1F (ENSEBUG00000015255) ENSEBUG00000010367 ENSEBUG00000016046 ENSEBUG00000016767 ENSEBUG00000010647 #22 ENSEBUG00000014969 ENSEBUG00000002777 ENSEBUG00000008721 ENSEBUG00000010123 ENSEBUG00000004584 ENSEBUG00000015951 esrp2 (ENSEBUG00000003913) PIK3R4 (ENSEBUG00000001794) ENSEBUG00000003509 ATP2C1 (ENSEBUG00000017043) ENSEBUG00000011130 ENSEBUG00000014992 ENSEBUG00000004807 ENSEBUG00000007687 LINGO2 (ENSEBUG00000001645) Cyclostomata ANCESTRAL SPECIES 694 ENSGT00940000158144.d #22 ENSGT00940000156102 #24 Lamprey MODERN SPECIES 81 ENSPMAG00000004951 #22 ENSPMAG00000004979 tex9 (ENSPMAG00000004985) ENSPMAG00000005004 ENSPMAG00000005022 ppp1caa (ENSPMAG00000005031) ENSPMAG00000005059 ENSPMAG00000005060 Hagfish MODERN SPECIES 668 ENSEBUG00000007493 ENSEBUG00000001377 ENSEBUG00000006273 lmnb1 (ENSEBUG00000007451) PSMB1 (ENSEBUG00000006620) ENSEBUG00000009812 ENSEBUG00000011183 tmod2 (ENSEBUG00000004995) ENSEBUG00000002091 ENSEBUG00000005004 ENSEBUG00000000830 ENSEBUG00000009065 ENSEBUG00000010544 #16 rhag (ENSEBUG00000000729) abhd2a (ENSEBUG00000017032) ENSEBUG00000004266 #22 ENSEBUG00000000477 #24 ENSEBUG00000013326 ENSEBUG00000009496 ENSEBUG00000002393 ENSEBUG00000005187 ENSEBUG00000012173 ENSEBUG00000015925 ENSEBUG00000005359 aida (ENSEBUG00000012967) ENSEBUG00000007863 ENSEBUG00000015277 hectd1 (ENSEBUG00000008319) ENSEBUG00000010906 DPH6 (ENSEBUG00000010833) ACTR2 (ENSEBUG00000006868)