Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00940000163698 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Glires ANCESTRAL SPECIES 10 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00940000163698 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Rodentia ANCESTRAL SPECIES 10 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00940000163698 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Rodentia_A ANCESTRAL SPECIES 9 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00940000163698 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a.ab ##18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b ENSGT00940000155657 Hystricomorpha_a ANCESTRAL SPECIES 56 ENSGT00940000161209 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a.ab ##18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b ENSGT00940000155657 Hystricomorpha_b ANCESTRAL SPECIES 81 ENSGT00940000161209 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a.ab ##18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b ENSGT00940000155657 Degu MODERN SPECIES 96 ZNF81 (ENSODEG00000009602) #7 ENSODEG00000009466 #8 ZNF182 (ENSODEG00000010486) #9 ENSODEG00000009058 #10 ENSODEG00000009360 #11 ENSODEG00000019635 #12 FTSJ1 (ENSODEG00000009855) #13 PORCN (ENSODEG00000008780) #14 ENSODEG00000009371 #15 TBC1D25 (ENSODEG00000009376) #16 ENSODEG00000019740 #17 ENSODEG00000009372 #18 WDR13 (ENSODEG00000009758) #19 ENSODEG00000009972 #20 WAS (ENSODEG00000009320) #21 SUV39H1 (ENSODEG00000010079) #22 ENSODEG00000009872 #23 ENSODEG00000011241 #24 GATA1 (ENSODEG00000008814) #25 ENSODEG00000009461 #26 PCSK1N (ENSODEG00000010528) #27 TIMM17B (ENSODEG00000010704) #28 ENSODEG00000008988 #29 SLC35A2 (ENSODEG00000009076) #30 PIM2 (ENSODEG00000009339) #31 OTUD5 (ENSODEG00000009050) #32 KCND1 (ENSODEG00000010342) #33 GRIPAP1 (ENSODEG00000009943) #34 ENSODEG00000009729 #35 Long-tailed chinchilla MODERN SPECIES 250 SLC38A5 (ENSCLAG00000004049) FTSJ1 (ENSCLAG00000011582) #13 PORCN (ENSCLAG00000015764) #14 EBP (ENSCLAG00000002404) #15 TBC1D25 (ENSCLAG00000002644) #16 RBM3 (ENSCLAG00000002908) ##18 WDR13 (ENSCLAG00000003526) #19 ENSCLAG00000003016 WAS (ENSCLAG00000003232) #21 SUV39H1 (ENSCLAG00000004044) #22 GLOD5 (ENSCLAG00000002227) #23 GATA1 (ENSCLAG00000002473) #25 HDAC6 (ENSCLAG00000002563) PCSK1N (ENSCLAG00000003392) #27 TIMM17B (ENSCLAG00000003552) #28 PQBP1 (ENSCLAG00000004380) #29 SLC35A2 (ENSCLAG00000004591) #30 PIM2 (ENSCLAG00000005773) #31 OTUD5 (ENSCLAG00000006102) #32 KCND1 (ENSCLAG00000002203) #33 GRIPAP1 (ENSCLAG00000002364) #34 ENSCLAG00000017539 TFE3 (ENSCLAG00000002396) CCDC120 (ENSCLAG00000003931) PRAF2 (ENSCLAG00000004889) Guinea pig MODERN SPECIES 132 ELK1 (ENSCPOG00000009149) UXT (ENSCPOG00000009154) ZNF81 (ENSCPOG00000031196) #7 ZNF182 (ENSCPOG00000031427) #9 ENSCPOG00000032054 #10 ENSCPOG00000030434 #11 ENSCPOG00000026336 ENSCPOG00000035952 FTSJ1 (ENSCPOG00000030576) #13 PORCN (ENSCPOG00000003541) #14 EBP (ENSCPOG00000014151) #15 TBC1D25 (ENSCPOG00000003548) #16 RBM3 (ENSCPOG00000003553) ##18 WDR13 (ENSCPOG00000005101) #19 WAS (ENSCPOG00000023506) #21 SUV39H1 (ENSCPOG00000013555) #22 GLOD5 (ENSCPOG00000003997) #23 GATA1 (ENSCPOG00000007573) #25 HDAC6 (ENSCPOG00000008955) PCSK1N (ENSCPOG00000007567) #27 TIMM17B (ENSCPOG00000008768) #28 PQBP1 (ENSCPOG00000032410) #29 SLC35A2 (ENSCPOG00000020236) #30 PIM2 (ENSCPOG00000006111) #31 OTUD5 (ENSCPOG00000027082) #32 KCND1 (ENSCPOG00000013271) #33 GRIPAP1 (ENSCPOG00000013274) #34 TFE3 (ENSCPOG00000012410) CCDC120 (ENSCPOG00000012416) PRAF2 (ENSCPOG00000030120) WDR45 (ENSCPOG00000012419) Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000037561 ENSHGLG00000037959 ENSHGLG00000035322 ENSHGLG00000048980 ENSHGLG00000043694 ENSHGLG00000002944 FTSJ1 (ENSHGLG00000003132) #13 PORCN (ENSHGLG00000001865) #14 EBP (ENSHGLG00000003626) #15 ENSHGLG00000043943 TBC1D25 (ENSHGLG00000005178) #16 ENSHGLG00000042246 ##18 WDR13 (ENSHGLG00000013774) #19 ENSHGLG00000037346 ENSHGLG00000019572 #21 SUV39H1 (ENSHGLG00000007605) #22 ENSHGLG00000008268 GLOD5 (ENSHGLG00000035331) #23 GATA1 (ENSHGLG00000009775) #25 HDAC6 (ENSHGLG00000010523) PCSK1N (ENSHGLG00000002975) #27 ENSHGLG00000020012 TIMM17B (ENSHGLG00000040054) #28 PQBP1 (ENSHGLG00000001252) #29 SLC35A2 (ENSHGLG00000001312) #30 PIM2 (ENSHGLG00000001519) #31 ENSHGLG00000001569 #32 KCND1 (ENSHGLG00000001895) #33 GRIPAP1 (ENSHGLG00000002058) #34 TFE3 (ENSHGLG00000001383) CCDC120 (ENSHGLG00000001767) Sciuridae ANCESTRAL SPECIES 28 ENSGT00940000163107 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00940000163698 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Marmotini ANCESTRAL SPECIES 81 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901.c ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Alpin marmot MODERN SPECIES 120 ZNF182 (ENSMMMG00000012687) #9 ENSMMMG00000012682 #10 ENSMMMG00000012670 #11 ENSMMMG00000012648 SLC38A5 (ENSMMMG00000012638) FTSJ1 (ENSMMMG00000012579) #13 PORCN (ENSMMMG00000012383) #14 EBP (ENSMMMG00000012370) #15 TBC1D25 (ENSMMMG00000012349) #16 RBM3 (ENSMMMG00000012319) #18 WDR13 (ENSMMMG00000012299) #19 WAS (ENSMMMG00000012285) #21 SUV39H1 (ENSMMMG00000012267) #22 ENSMMMG00000012261 ENSMMMG00000012256 GLOD5 (ENSMMMG00000012244) #23 GATA1 (ENSMMMG00000012237) #25 HDAC6 (ENSMMMG00000012161) ENSMMMG00000012156 PCSK1N (ENSMMMG00000012151) #27 TIMM17B (ENSMMMG00000012146) #28 PQBP1 (ENSMMMG00000012121) #29 OTUD5 (ENSMMMG00000012061) #32 KCND1 (ENSMMMG00000012055) #33 GRIPAP1 (ENSMMMG00000011943) #34 TFE3 (ENSMMMG00000011726) ENSMMMG00000011713 WDR45 (ENSMMMG00000011555) Marmotini_b ANCESTRAL SPECIES 120 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901.c ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Arctic ground squirrel MODERN SPECIES 341 ZNF182 (ENSUPAG00010002470) #9 ENSUPAG00010002478 #10 ENSUPAG00010002488 #11 SLC38A5 (ENSUPAG00010002495) FTSJ1 (ENSUPAG00010002545) #13 PORCN (ENSUPAG00010002577) #14 EBP (ENSUPAG00010002710) #15 TBC1D25 (ENSUPAG00010002723) #16 WDR13 (ENSUPAG00010002757) #19 WAS (ENSUPAG00010002779) #21 SUV39H1 (ENSUPAG00010002798) #22 ENSUPAG00010002821 GLOD5 (ENSUPAG00010002824) #23 GATA1 (ENSUPAG00010002837) #25 HDAC6 (ENSUPAG00010002848) ERAS (ENSUPAG00010002926) PCSK1N (ENSUPAG00010002932) #27 TIMM17B (ENSUPAG00010002940) #28 PQBP1 (ENSUPAG00010002947) #29 SLC35A2 (ENSUPAG00010002977) #30 PIM2 (ENSUPAG00010002998) #31 OTUD5 (ENSUPAG00010003005) #32 KCND1 (ENSUPAG00010003047) #33 GRIPAP1 (ENSUPAG00010003056) #34 ENSUPAG00010003193 CCDC120 (ENSUPAG00010003364) Squirrel MODERN SPECIES 321 ENSSTOG00000028170 ZNF182 (ENSSTOG00000020030) #9 ENSSTOG00000006249 #10 ENSSTOG00000034288 #11 ENSSTOG00000015375 SLC38A5 (ENSSTOG00000001034) FTSJ1 (ENSSTOG00000027717) #13 PORCN (ENSSTOG00000001047) #14 EBP (ENSSTOG00000001055) #15 TBC1D25 (ENSSTOG00000026006) #16 ENSSTOG00000027493 #18 WDR13 (ENSSTOG00000014866) #19 WAS (ENSSTOG00000028043) #21 SUV39H1 (ENSSTOG00000015328) #22 GLOD5 (ENSSTOG00000014150) #23 GATA1 (ENSSTOG00000026993) #25 HDAC6 (ENSSTOG00000014156) PCSK1N (ENSSTOG00000025546) #27 ERAS (ENSSTOG00000028430) TIMM17B (ENSSTOG00000014173) #28 PQBP1 (ENSSTOG00000034920) #29 SLC35A2 (ENSSTOG00000014179) #30 PIM2 (ENSSTOG00000014191) #31 OTUD5 (ENSSTOG00000014202) #32 KCND1 (ENSSTOG00000019883) #33 GRIPAP1 (ENSSTOG00000014221) #34 TFE3 (ENSSTOG00000014237) CCDC120 (ENSSTOG00000020841) PRAF2 (ENSSTOG00000009679) Eurasian red squirrel MODERN SPECIES 156 ELK1 (ENSSVLG00005010829) ENSSVLG00005010750 ZNF81 (ENSSVLG00005010677) #7 ZNF182 (ENSSVLG00005010624) #9 ENSSVLG00005010573 #10 ENSSVLG00005010552 #11 ENSSVLG00005010511 ENSSVLG00005010403 FTSJ1 (ENSSVLG00005010314) #13 PORCN (ENSSVLG00005021517) #14 EBP (ENSSVLG00005021464) #15 TBC1D25 (ENSSVLG00005021446) #16 RBM3 (ENSSVLG00005021391) #18 WDR13 (ENSSVLG00005021358) #19 WAS (ENSSVLG00005021256) #21 SUV39H1 (ENSSVLG00005021209) #22 GLOD5 (ENSSVLG00005021145) #23 GATA1 (ENSSVLG00005021013) #25 HDAC6 (ENSSVLG00005020953) ERAS (ENSSVLG00005020927) PCSK1N (ENSSVLG00005020895) #27 TIMM17B (ENSSVLG00005020828) #28 PQBP1 (ENSSVLG00005020775) #29 SLC35A2 (ENSSVLG00005020649) #30 PIM2 (ENSSVLG00005020572) #31 OTUD5 (ENSSVLG00005020359) #32 KCND1 (ENSSVLG00005020301) #33 GRIPAP1 (ENSSVLG00005020144) #34 TFE3 (ENSSVLG00005020065) CCDC120 (ENSSVLG00005019933) PRAF2 (ENSSVLG00005019896) Rodentia_B ANCESTRAL SPECIES 31 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Muroidea ANCESTRAL SPECIES 30 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00940000162921 #11 ENSGT00390000012484.c ENSGT00390000012484.d ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Muroidea_A ANCESTRAL SPECIES 7 ENSGT00390000003231.b ENSGT00530000063186.a ENSGT00950000182841.b.a.a.a.i.b ENSGT00940000163515.j ENSGT00950000182841.b.a.a.a.i.a ENSGT00940000166424 ENSGT00390000012484.d ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000003231.b ENSGT00530000063186.a ENSGT00950000182841.b.a.a.a.i.b ENSGT00940000163515.j ENSGT00950000182841.b.a.a.a.i.a ENSGT00940000166424 ENSGT00390000012484.d ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Cricetinae ANCESTRAL SPECIES 17 ENSGT00390000003231.b ENSGT00530000063186.a ENSGT00950000182841.b.a.a.a.i.b ENSGT00940000163515.j ENSGT00950000182841.b.a.a.a.i.a ENSGT00940000166424 ENSGT00390000012484.d ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Chinese hamster chok1gshd MODERN SPECIES 175 Lancl3 (ENSCGRG00001020578) ENSCGRG00001001938 ENSCGRG00001004165 ENSCGRG00001010971 B630019K06Rik (ENSCGRG00001021404) ENSCGRG00001021892 ENSCGRG00001018882 Slc38a5 (ENSCGRG00001016687) Ftsj1 (ENSCGRG00001023654) #13 Porcn (ENSCGRG00001021670) #14 Ebp (ENSCGRG00001001031) #15 Tbc1d25 (ENSCGRG00001018227) #16 Rbm3 (ENSCGRG00001018909) #18 Wdr13 (ENSCGRG00001001328) #19 Was (ENSCGRG00001012275) #21 Suv39h1 (ENSCGRG00001023557) #22 Glod5 (ENSCGRG00001014309) #23 ENSCGRG00001009581 Gata1 (ENSCGRG00001017719) #25 Hdac6 (ENSCGRG00001011507) ENSCGRG00001001303 Pcsk1n (ENSCGRG00001013577) #27 Timm17b (ENSCGRG00001010270) #28 Pqbp1 (ENSCGRG00001001371) #29 Slc35a2 (ENSCGRG00001000798) #30 Pim2 (ENSCGRG00001010240) #31 Otud5 (ENSCGRG00001016496) #32 Kcnd1 (ENSCGRG00001004134) #33 Gripap1 (ENSCGRG00001010183) #34 Tfe3 (ENSCGRG00001000716) Ccdc120 (ENSCGRG00001020835) Golden Hamster MODERN SPECIES 799 ENSMAUG00000017912 Slc38a5 (ENSMAUG00000000379) Porcn (ENSMAUG00000004437) #14 ENSMAUG00000015656 #15 Tbc1d25 (ENSMAUG00000004232) #16 ENSMAUG00000016488 #18 Wdr13 (ENSMAUG00000009779) #19 Was (ENSMAUG00000000519) #21 Suv39h1 (ENSMAUG00000011289) #22 Glod5 (ENSMAUG00000008099) #23 ENSMAUG00000020294 #25 Hdac6 (ENSMAUG00000022133) Eras (ENSMAUG00000003962) Pcsk1n (ENSMAUG00000015797) #27 ENSMAUG00000016716 #28 ENSMAUG00000013093 #29 Slc35a2 (ENSMAUG00000015557) #30 Pim2 (ENSMAUG00000009222) #31 Otud5 (ENSMAUG00000015273) #32 Kcnd1 (ENSMAUG00000008332) #33 Gripap1 (ENSMAUG00000009161) #34 Tfe3 (ENSMAUG00000002865) Ccdc120 (ENSMAUG00000000888) Wdr45 (ENSMAUG00000011036) Cricetidae_B ANCESTRAL SPECIES 45 ENSGT00390000003231.b ENSGT00530000063186.a ENSGT00950000182841.b.a.a.a.i.b ENSGT00940000163515.j ENSGT00950000182841.b.a.a.a.i.a ENSGT00940000166424 ENSGT00390000012484.d ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000001616 ENSPEMG00000001590 ENSPEMG00000025989 ENSPEMG00000026731 Dipk2b (ENSPEMG00000026275) Kdm6a (ENSPEMG00000011007) ENSPEMG00000028355 Slc38a5 (ENSPEMG00000012763) ENSPEMG00000015698 #13 Porcn (ENSPEMG00000018381) #14 Ebp (ENSPEMG00000019215) #15 Tbc1d25 (ENSPEMG00000000481) #16 Rbm3 (ENSPEMG00000012411) #18 Wdr13 (ENSPEMG00000030841) #19 Was (ENSPEMG00000017673) #21 Suv39h1 (ENSPEMG00000012820) #22 Glod5 (ENSPEMG00000014471) #23 Gata1 (ENSPEMG00000010138) #25 Hdac6 (ENSPEMG00000002814) Eras (ENSPEMG00000018814) Pcsk1n (ENSPEMG00000017215) #27 Timm17b (ENSPEMG00000000361) #28 Pqbp1 (ENSPEMG00000015122) #29 Slc35a2 (ENSPEMG00000011729) #30 Pim2 (ENSPEMG00000010225) #31 Otud5 (ENSPEMG00000025054) #32 Kcnd1 (ENSPEMG00000003794) #33 Gripap1 (ENSPEMG00000010836) #34 Tfe3 (ENSPEMG00000013183) Ccdc120 (ENSPEMG00000027723) Praf2 (ENSPEMG00000029377) Prairie vole MODERN SPECIES 1 Dynlt3 (ENSMOCG00000013937) ENSMOCG00000005328 ENSMOCG00000002347 Xk (ENSMOCG00000021048) Lancl3 (ENSMOCG00000018888) ENSMOCG00000015166 Slc38a5 (ENSMOCG00000015897) ENSMOCG00000000507 #13 ENSMOCG00000008118 Porcn (ENSMOCG00000012499) #14 Ebp (ENSMOCG00000010008) #15 Tbc1d25 (ENSMOCG00000006324) #16 Rbm3 (ENSMOCG00000001511) #18 Wdr13 (ENSMOCG00000000752) #19 Was (ENSMOCG00000022215) #21 Suv39h1 (ENSMOCG00000013532) #22 Glod5 (ENSMOCG00000018812) #23 Gata1 (ENSMOCG00000018101) #25 Hdac6 (ENSMOCG00000022461) Eras (ENSMOCG00000017489) Pcsk1n (ENSMOCG00000016403) #27 Timm17b (ENSMOCG00000022137) #28 Pqbp1 (ENSMOCG00000020123) #29 Slc35a2 (ENSMOCG00000015110) #30 Pim2 (ENSMOCG00000005351) #31 Otud5 (ENSMOCG00000011416) #32 ENSMOCG00000018971 Kcnd1 (ENSMOCG00000002342) #33 Gripap1 (ENSMOCG00000007615) #34 Tfe3 (ENSMOCG00000013907) Ccdc120 (ENSMOCG00000008950) Murinae ANCESTRAL SPECIES 33 ENSGT00390000003231.b ENSGT00530000063186.a ENSGT00950000182841.b.a.a.a.i.b ENSGT00940000163515.j ENSGT00950000182841.b.a.a.a.i.a.a ENSGT00940000166424 ENSGT00390000012484.d ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Rat DUPLICATION Rat MODERN SPECIES 46 LOC120099305 (ENSRNOG00000063778) LOC102552474 (ENSRNOG00000039615) LOC120099271 (ENSRNOG00000066456) LOC691895 (ENSRNOG00000063709) ENSRNOG00000063832 RGD1560784 (ENSRNOG00000032522) Ssx1 (ENSRNOG00000027850) Slc38a5 (ENSRNOG00000027767) Ftsj1 (ENSRNOG00000004776) #13 Porcn (ENSRNOG00000004819) #14 Ebp (ENSRNOG00000004903) #15 Tbc1d25 (ENSRNOG00000005303) #16 Rbm3 (ENSRNOG00000005387) #18 Wdr13 (ENSRNOG00000039587) #19 Was (ENSRNOG00000031058) #21 Suv39h1 (ENSRNOG00000039576) #22 Glod5 (ENSRNOG00000039571) #23 ENSRNOG00000064215 Gata1 (ENSRNOG00000047663) #25 Hdac6 (ENSRNOG00000048738) Eras (ENSRNOG00000042470) Pcsk1n (ENSRNOG00000046021) #27 Timm17b (ENSRNOG00000063664) #28 Pqbp1 (ENSRNOG00000007766) #29 Slc35a2 (ENSRNOG00000024801) #30 Pim2 (ENSRNOG00000008177) #31 Otud5 (ENSRNOG00000008764) #32 Kcnd1 (ENSRNOG00000039544) #33 Gripap1 (ENSRNOG00000009071) #34 Tfe3 (ENSRNOG00000009605) Ccdc120 (ENSRNOG00000009687) Rat MODERN SPECIES 46 AABR07042418.1 (ENSRNOG00000051726) ENSRNOG00000069396 Fam9c (ENSRNOG00000069253) LOC100912196 (ENSRNOG00000062315) AABR07042293.1 (ENSRNOG00000037381) ENSRNOG00000067514 LOC689396 (ENSRNOG00000032418) Slitrk2 (ENSRNOG00000011562) LOC120099343 (ENSRNOG00000066658) AABR07042226.1 (ENSRNOG00000058521) Ctag2 (ENSRNOG00000012560) Slitrk4 (ENSRNOG00000062783) Magea9 (ENSRNOG00000023016) AABR07042071.1 (ENSRNOG00000046097) ENSRNOG00000067343 ENSRNOG00000063631 #22 AABR07041997.1 (ENSRNOG00000026227) Magec2 (ENSRNOG00000026265) LOC102546596 (ENSRNOG00000049579) Ldoc1 (ENSRNOG00000003409) ENSRNOG00000070217 AABR07041972.1 (ENSRNOG00000058507) ENSRNOG00000063675 RGD1561327 (ENSRNOG00000031222) Sox3 (ENSRNOG00000058173) RGD1560585 (ENSRNOG00000070469) RGD1560171 (ENSRNOG00000043487) LOC688842 (ENSRNOG00000037399) Atp11c (ENSRNOG00000003472) Mcf2 (ENSRNOG00000003435) F9 (ENSRNOG00000003430) Mus ANCESTRAL SPECIES 9 ENSGT00940000160244 ENSGT00940000162492 ENSGT00390000003231.b ENSGT00530000063186.a ENSGT00950000182841.b.a.a.a.i.a.a ENSGT00940000166424 ENSGT00390000012484.d ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Mus_A ANCESTRAL SPECIES 15 ENSGT00940000162492.h ENSGT00390000003231.b ENSGT00530000063186.a ENSGT00940000169466 ENSGT00950000182841.b.a.a.a.i.a.a ENSGT00940000166424 ENSGT00390000012484.d ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Mus_B ANCESTRAL SPECIES 14 ENSGT00390000003231.b ENSGT00530000063186.a ENSGT00940000169466 ENSGT00950000182841.b.a.a.a.i.a.a ENSGT00940000166424 ENSGT00390000012484.d.e.a.b ENSGT00390000012484.d.e.a.a.a.a.a.a.a.a.a ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b Mouse MODERN SPECIES 37 Ssxb3 (ENSMUSG00000079701) Ssxb6 (ENSMUSG00000079702) Gm14459 (ENSMUSG00000079704) Ssxb2 (ENSMUSG00000023165) Ssxb1 (ENSMUSG00000079705) Ssxb9 (ENSMUSG00000068218) Ssxb10 (ENSMUSG00000068219) Slc38a5 (ENSMUSG00000031170) Ftsj1 (ENSMUSG00000031171) #13 Porcn (ENSMUSG00000031169) #14 Ebp (ENSMUSG00000031168) #15 Tbc1d25 (ENSMUSG00000039201) #16 Rbm3 (ENSMUSG00000031167) #18 Wdr13 (ENSMUSG00000031166) #19 Was (ENSMUSG00000031165) #21 Suv39h1 (ENSMUSG00000039231) #22 Glod5 (ENSMUSG00000031163) #23 Gata1 (ENSMUSG00000031162) #25 Hdac6 (ENSMUSG00000031161) Eras (ENSMUSG00000031160) Pcsk1n (ENSMUSG00000039278) #27 Timm17b (ENSMUSG00000031158) #28 Pqbp1 (ENSMUSG00000031157) #29 Slc35a2 (ENSMUSG00000031156) #30 Pim2 (ENSMUSG00000031155) #31 Otud5 (ENSMUSG00000031154) #32 Kcnd1 (ENSMUSG00000009731) #33 Gripap1 (ENSMUSG00000031153) #34 Tfe3 (ENSMUSG00000000134) Ccdc120 (ENSMUSG00000031150) Praf2 (ENSMUSG00000031149) Mus_C ANCESTRAL SPECIES 27 ENSGT00940000160244 ENSGT00390000003231.b ENSGT00860000135843 ENSGT00530000063186.a ENSGT00940000169466 ENSGT00950000182841.b.a.a.a.i.a.a ENSGT00940000166424 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.a.a #18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00940000162901 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b spretus MODERN SPECIES 19 Xk (MGP_SPRETEiJ_G0034075) MGP_SPRETEiJ_G0034074 Lancl3 (MGP_SPRETEiJ_G0034073) 4930402K13Rik (MGP_SPRETEiJ_G0034072) MGP_SPRETEiJ_G0034071 MGP_SPRETEiJ_G0034070 B630019K06Rik (MGP_SPRETEiJ_G0034069) Slc38a5 (MGP_SPRETEiJ_G0034068) Ftsj1 (MGP_SPRETEiJ_G0034067) #13 Porcn (MGP_SPRETEiJ_G0034066) #14 Ebp (MGP_SPRETEiJ_G0034065) #15 Tbc1d25 (MGP_SPRETEiJ_G0034064) #16 Rbm3 (MGP_SPRETEiJ_G0034063) #18 Wdr13 (MGP_SPRETEiJ_G0034062) #19 Was (MGP_SPRETEiJ_G0034061) #21 Suv39h1 (MGP_SPRETEiJ_G0034060) #22 Glod5 (MGP_SPRETEiJ_G0034059) #23 Gata1 (MGP_SPRETEiJ_G0034058) #25 Hdac6 (MGP_SPRETEiJ_G0034057) Eras (MGP_SPRETEiJ_G0034056) Pcsk1n (MGP_SPRETEiJ_G0034055) #27 MGP_SPRETEiJ_G0034054 MGP_SPRETEiJ_G0034053 Timm17b (MGP_SPRETEiJ_G0034052) #28 Pqbp1 (MGP_SPRETEiJ_G0034051) #29 MGP_SPRETEiJ_G0034050 #30 Pim2 (MGP_SPRETEiJ_G0034049) #31 Otud5 (MGP_SPRETEiJ_G0034048) #32 Kcnd1 (MGP_SPRETEiJ_G0034047) #33 Gripap1 (MGP_SPRETEiJ_G0034046) #34 Tfe3 (MGP_SPRETEiJ_G0034045) Steppe mouse MODERN SPECIES 1042 Suv39h1 (ENSMSIG00000001933) #22 Ryukyu mouse MODERN SPECIES 19 Dynlt3 (MGP_CAROLIEiJ_G0032926) Cybb (MGP_CAROLIEiJ_G0032925) MGP_CAROLIEiJ_G0032924 MGP_CAROLIEiJ_G0032923 Lancl3 (MGP_CAROLIEiJ_G0032922) 4930402K13Rik (MGP_CAROLIEiJ_G0032921) B630019K06Rik (MGP_CAROLIEiJ_G0032920) Slc38a5 (MGP_CAROLIEiJ_G0032919) Ftsj1 (MGP_CAROLIEiJ_G0032918) #13 Porcn (MGP_CAROLIEiJ_G0032917) #14 Ebp (MGP_CAROLIEiJ_G0032916) #15 Tbc1d25 (MGP_CAROLIEiJ_G0032915) #16 MGP_CAROLIEiJ_G0032914 #18 Wdr13 (MGP_CAROLIEiJ_G0032913) #19 Was (MGP_CAROLIEiJ_G0032912) #21 Suv39h1 (MGP_CAROLIEiJ_G0032911) #22 Glod5 (MGP_CAROLIEiJ_G0032910) #23 Gata1 (MGP_CAROLIEiJ_G0032909) #25 Hdac6 (MGP_CAROLIEiJ_G0032908) Eras (MGP_CAROLIEiJ_G0032907) Pcsk1n (MGP_CAROLIEiJ_G0032906) #27 MGP_CAROLIEiJ_G0032905 Timm17b (MGP_CAROLIEiJ_G0032904) #28 Pqbp1 (MGP_CAROLIEiJ_G0032903) #29 Slc35a2 (MGP_CAROLIEiJ_G0032902) #30 Pim2 (MGP_CAROLIEiJ_G0032901) #31 Otud5 (MGP_CAROLIEiJ_G0032900) #32 Kcnd1 (MGP_CAROLIEiJ_G0032899) #33 Gripap1 (MGP_CAROLIEiJ_G0032898) #34 Tfe3 (MGP_CAROLIEiJ_G0032897) Ccdc120 (MGP_CAROLIEiJ_G0032896) Shrew mouse MODERN SPECIES 23 MGP_PahariEiJ_G0031475 H2ap (MGP_PahariEiJ_G0031474) Dynlt3 (MGP_PahariEiJ_G0031473) Cybb (MGP_PahariEiJ_G0031472) MGP_PahariEiJ_G0031471 Lancl3 (MGP_PahariEiJ_G0031470) B630019K06Rik (MGP_PahariEiJ_G0031469) Slc38a5 (MGP_PahariEiJ_G0031468) Ftsj1 (MGP_PahariEiJ_G0031467) #13 Porcn (MGP_PahariEiJ_G0031466) #14 Ebp (MGP_PahariEiJ_G0031465) #15 Tbc1d25 (MGP_PahariEiJ_G0031464) #16 Rbm3 (MGP_PahariEiJ_G0031463) #18 Wdr13 (MGP_PahariEiJ_G0031462) #19 Was (MGP_PahariEiJ_G0031461) #21 Suv39h1 (MGP_PahariEiJ_G0031460) #22 Glod5 (MGP_PahariEiJ_G0031459) #23 Gata1 (MGP_PahariEiJ_G0031458) #25 Hdac6 (MGP_PahariEiJ_G0031457) Eras (MGP_PahariEiJ_G0031456) Pcsk1n (MGP_PahariEiJ_G0031455) #27 MGP_PahariEiJ_G0031453 Pqbp1 (MGP_PahariEiJ_G0031451) #29 Slc35a2 (MGP_PahariEiJ_G0031450) #30 Pim2 (MGP_PahariEiJ_G0031449) #31 Otud5 (MGP_PahariEiJ_G0031448) #32 Kcnd1 (MGP_PahariEiJ_G0031447) #33 Gripap1 (MGP_PahariEiJ_G0031446) #34 Tfe3 (MGP_PahariEiJ_G0031445) Ccdc120 (MGP_PahariEiJ_G0031444) Praf2 (MGP_PahariEiJ_G0031443) Upper Galilee mountains blind mole rat MODERN SPECIES 1197 Cfp (ENSNGAG00000014488) ENSNGAG00000000443 Uxt (ENSNGAG00000000648) ENSNGAG00000019509 #7 Zfp182 (ENSNGAG00000015598) #9 Spaca5 (ENSNGAG00000017226) #10 Zfp300 (ENSNGAG00000017614) #11 ENSNGAG00000018992 ENSNGAG00000018629 #13 Porcn (ENSNGAG00000013300) #14 Ebp (ENSNGAG00000011873) #15 Tbc1d25 (ENSNGAG00000015501) #16 Rbm3 (ENSNGAG00000012951) ##18 Wdr13 (ENSNGAG00000020114) #19 Was (ENSNGAG00000021049) #21 Suv39h1 (ENSNGAG00000006669) #22 ENSNGAG00000009725 Glod5 (ENSNGAG00000012845) #23 ENSNGAG00000001174 Gata1 (ENSNGAG00000006537) #25 ENSNGAG00000011503 Hdac6 (ENSNGAG00000012074) Eras (ENSNGAG00000014397) Pcsk1n (ENSNGAG00000014688) #27 Timm17b (ENSNGAG00000016630) #28 ENSNGAG00000019854 #29 Slc35a2 (ENSNGAG00000020201) #30 Pim2 (ENSNGAG00000001210) #31 Otud5 (ENSNGAG00000020154) #32 Kcnd1 (ENSNGAG00000013998) #33 Gripap1 (ENSNGAG00000000137) #34 Lesser Egyptian jerboa MODERN SPECIES 260 ENSJJAG00000014517 #13 Porcn (ENSJJAG00000013295) #14 Ebp (ENSJJAG00000012561) #15 Tbc1d25 (ENSJJAG00000011492) #16 Rbm3 (ENSJJAG00000012962) #18 Wdr13 (ENSJJAG00000012912) #19 Was (ENSJJAG00000012369) #21 Suv39h1 (ENSJJAG00000012070) #22 Kangaroo rat MODERN SPECIES 473 Ftsj1 (ENSDORG00000000074) #13 Porcn (ENSDORG00000003798) #14 ENSDORG00000026687 #15 Tbc1d25 (ENSDORG00000000180) #16 Rbm3 (ENSDORG00000000182) #18 Wdr13 (ENSDORG00000026630) #19 Was (ENSDORG00000004951) #21 Suv39h1 (ENSDORG00000025898) #22 Glod5 (ENSDORG00000027963) #23 Gata1 (ENSDORG00000028973) #25 Pcsk1n (ENSDORG00000007957) #27 Timm17b (ENSDORG00000002655) #28 Pqbp1 (ENSDORG00000002656) #29 Slc35a2 (ENSDORG00000002657) #30 Pim2 (ENSDORG00000023524) #31 Otud5 (ENSDORG00000002659) #32 Kcnd1 (ENSDORG00000002661) #33 Gripap1 (ENSDORG00000002663) #34 Tfe3 (ENSDORG00000026289) Ccdc120 (ENSDORG00000013934) Praf2 (ENSDORG00000024385) ENSDORG00000013938 Gpkow (ENSDORG00000013663) Lagomorpha ANCESTRAL SPECIES 43 ENSGT00940000161209 ENSGT00940000157571 ENSGT00390000018078 ENSGT00940000162553 #7 ENSGT00940000162614 #9 ENSGT00940000162205 #10 ENSGT00390000012484 ENSGT00940000161233 ENSGT00730000111146 #13 ENSGT01030000234564.a.a.b.a #14 ENSGT00530000063715.a #15 ENSGT00940000159173 #16 ENSGT00940000153524.b.b ##18 ENSGT00940000153634.a #19 ENSGT00730000110895.b.b #21 ENSGT00940000160063 #22 ENSGT00940000153941.a.b #23 ENSGT00940000161156 #25 ENSGT00940000159563 ENSGT00390000013488 #27 ENSGT00390000017780.e #28 ENSGT00950000183102.C #29 ENSGT00950000182827.B #30 ENSGT00940000161689 #31 ENSGT00940000158963 #32 ENSGT00940000162057 #33 ENSGT00720000108868 #34 ENSGT00940000157503 ENSGT00940000154102.b ENSGT00390000008631.b ENSGT00940000155657 Rabbit MODERN SPECIES 1401 ZNF81 (ENSOCUG00000029071) #7 ZNF182 (ENSOCUG00000017226) #9 ENSOCUG00000022732 LYZE (ENSOCUG00000002990) #10 ENSOCUG00000038971 ENSOCUG00000007996 SLC38A5 (ENSOCUG00000008001) ENSOCUG00000008009 #13 PORCN (ENSOCUG00000015293) #14 EBP (ENSOCUG00000015316) #15 TBC1D25 (ENSOCUG00000009251) #16 ENSOCUG00000002271 ##18 ENSOCUG00000000559 WDR13 (ENSOCUG00000014470) #19 WAS (ENSOCUG00000015393) #21 SUV39H1 (ENSOCUG00000003807) #22 GLOD5 (ENSOCUG00000008902) #23 GATA1 (ENSOCUG00000025597) #25 HDAC6 (ENSOCUG00000010141) PCSK1N (ENSOCUG00000009021) #27 TIMM17B (ENSOCUG00000027418) #28 PQBP1 (ENSOCUG00000011703) #29 SLC35A2 (ENSOCUG00000011709) #30 ENSOCUG00000015757 #31 OTUD5 (ENSOCUG00000015767) #32 KCND1 (ENSOCUG00000015777) #33 GRIPAP1 (ENSOCUG00000015788) #34 TFE3 (ENSOCUG00000015807) CCDC120 (ENSOCUG00000004644) PRAF2 (ENSOCUG00000035406) WDR45 (ENSOCUG00000023611) Tree shrew MODERN SPECIES 135 WAS (ENSTBEG00000000531) #21 SUV39H1 (ENSTBEG00000002199) #22