Euteleostomi ANCESTRAL SPECIES 93 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01100000263696 ENSGT00390000000378.d.b ENSGT00390000001618 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 Sarcopterygii ANCESTRAL SPECIES 35 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000001618 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00550000074797.b ENSGT00940000160802 Tetrapoda ANCESTRAL SPECIES 13 ENSGT00390000006454 ENSGT00940000155672 ENSGT00390000010722 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000001618 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000164330 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 Amniota ANCESTRAL SPECIES 18 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00390000014787 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 Mammalia ANCESTRAL SPECIES 33 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 Theria ANCESTRAL SPECIES 25 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 ENSGT00390000007830 ENSGT00940000154849.a ENSGT00940000162866 Eutheria ANCESTRAL SPECIES 4 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 Boreoeutheria ANCESTRAL SPECIES 4 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00940000166945 #29 ENSGT01030000238029 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 Euarchontoglires ANCESTRAL SPECIES 4 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 Glires ANCESTRAL SPECIES 3 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Rodentia ANCESTRAL SPECIES 4 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Rodentia_A ANCESTRAL SPECIES 3 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00960000187851 ENSGT00940000165476 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 ENSGT00390000007830 ENSGT00940000154849.a ENSGT01060000250264 Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.b #31 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.b #31 ENSGT00940000165476 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 ENSGT00390000007830 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.b #31 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT00940000165476 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Degu MODERN SPECIES 205 CHCT1 (ENSODEG00000013458) #7 ENSODEG00000012951 #8 ENSODEG00000013719 #9 ENSODEG00000015311 #10 ENSODEG00000012868 #11 MYO19 (ENSODEG00000013791) #12 GGNBP2 (ENSODEG00000012950) #13 ENSODEG00000012529 #14 ENSODEG00000013042 #15 ENSODEG00000012953 #16 ENSODEG00000013680 #17 LHX1 (ENSODEG00000012895) #18 AATF (ENSODEG00000013074) #19 ENSODEG00000013269 #20 ACACA (ENSODEG00000014030) #21 TADA2A (ENSODEG00000014579) #22 DUSP14 (ENSODEG00000020057) #23 SYNRG (ENSODEG00000013858) #24 ENSODEG00000012814 #25 ENSODEG00000012382 #26 HNF1B (ENSODEG00000012709) #27 HEATR6 (ENSODEG00000013428) #28 ENSODEG00000013109 #29 ENSODEG00000013480 #30 ENSODEG00000013198 #31 ENSODEG00000013395 #32 ENSODEG00000013298 #33 ENSODEG00000012792 #34 HEATR9 (ENSODEG00000012621) #35 ENSODEG00000012915 #36 MMP28 (ENSODEG00000016303) #37 Long-tailed chinchilla MODERN SPECIES 158 PPM1D (ENSCLAG00000010623) APPBP2 (ENSCLAG00000014528) CHCT1 (ENSCLAG00000015267) #7 ENSCLAG00000012909 #10 CA4 (ENSCLAG00000014926) ZNHIT3 (ENSCLAG00000013180) #11 MYO19 (ENSCLAG00000011498) #12 PIGW (ENSCLAG00000010868) GGNBP2 (ENSCLAG00000015068) #13 DHRS11 (ENSCLAG00000012667) #14 MRM1 (ENSCLAG00000010960) #15 LHX1 (ENSCLAG00000014662) #18 AATF (ENSCLAG00000014631) #19 C17orf78 (ENSCLAG00000013611) ACACA (ENSCLAG00000015071) #21 TADA2A (ENSCLAG00000016976) #22 DUSP14 (ENSCLAG00000012666) #23 SYNRG (ENSCLAG00000013031) #24 DDX52 (ENSCLAG00000016292) #25 HNF1B (ENSCLAG00000016506) #27 HEATR6 (ENSCLAG00000010390) #28 ENSCLAG00000012435 ENSCLAG00000011924 ENSCLAG00000016754 #29 ENSCLAG00000012634 #30 ENSCLAG00000014501 #31 Guinea pig MODERN SPECIES 32 BCAS3 (ENSCPOG00000001933) PPM1D (ENSCPOG00000000343) APPBP2 (ENSCPOG00000033874) CHCT1 (ENSCPOG00000005521) #7 ENSCPOG00000005504 #10 CA4 (ENSCPOG00000026479) ZNHIT3 (ENSCPOG00000031447) #11 MYO19 (ENSCPOG00000004270) #12 PIGW (ENSCPOG00000004275) GGNBP2 (ENSCPOG00000004278) #13 DHRS11 (ENSCPOG00000036629) #14 MRM1 (ENSCPOG00000004283) #15 LHX1 (ENSCPOG00000027154) #18 AATF (ENSCPOG00000006037) #19 ACACA (ENSCPOG00000006043) #21 TADA2A (ENSCPOG00000001869) #22 DUSP14 (ENSCPOG00000032995) #23 SYNRG (ENSCPOG00000004643) #24 DDX52 (ENSCPOG00000001232) #25 HNF1B (ENSCPOG00000001234) #27 HEATR6 (ENSCPOG00000015165) #28 ENSCPOG00000036860 ENSCPOG00000035230 #29 ENSCPOG00000032867 #30 ENSCPOG00000033663 #31 ENSCPOG00000037138 #31 ENSCPOG00000026400 ##30 ENSCPOG00000039417 ##30 CCL14 (ENSCPOG00000035450) ##30 ENSCPOG00000008852 #34 HEATR9 (ENSCPOG00000010117) #35 Naked mole-rat female MODERN SPECIES 12 ENSHGLG00000008032 ENSHGLG00000045654 ENSHGLG00000050018 ENSHGLG00000009096 #10 ENSHGLG00000010334 ENSHGLG00000034474 #11 ENSHGLG00000011039 #12 PIGW (ENSHGLG00000012822) GGNBP2 (ENSHGLG00000013148) #13 DHRS11 (ENSHGLG00000035143) #14 MRM1 (ENSHGLG00000008701) #15 LHX1 (ENSHGLG00000042105) #18 AATF (ENSHGLG00000009510) #19 ENSHGLG00000038049 ACACA (ENSHGLG00000011781) #21 TADA2A (ENSHGLG00000003972) #22 DUSP14 (ENSHGLG00000033195) #23 ENSHGLG00000047903 SYNRG (ENSHGLG00000004431) #24 DDX52 (ENSHGLG00000006235) #25 ENSHGLG00000007638 #27 ENSHGLG00000001663 ENSHGLG00000001698 POLG2 (ENSHGLG00000037428) DDX5 (ENSHGLG00000001771) ENSHGLG00000044021 ENSHGLG00000001847 ENSHGLG00000001992 ENSHGLG00000002095 ENSHGLG00000002130 ENSHGLG00000047592 Sciuridae ANCESTRAL SPECIES 4 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00960000187851 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Marmotini ANCESTRAL SPECIES 8 ENSGT00940000153288.a.b.a.a ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00390000010003.ab ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Marmotini_b ANCESTRAL SPECIES 5 ENSGT00940000153288.a.b.a.a ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00390000010003.ab ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Squirrel MODERN SPECIES 90 PPM1D (ENSSTOG00000021256) APPBP2 (ENSSTOG00000011350) CHCT1 (ENSSTOG00000003182) #7 ENSSTOG00000029070 #10 CA4 (ENSSTOG00000010432) ZNHIT3 (ENSSTOG00000013559) #11 MYO19 (ENSSTOG00000013563) #12 PIGW (ENSSTOG00000034045) GGNBP2 (ENSSTOG00000002398) #13 DHRS11 (ENSSTOG00000002410) #14 MRM1 (ENSSTOG00000002422) #15 LHX1 (ENSSTOG00000022593) #18 AATF (ENSSTOG00000002458) #19 C17orf78 (ENSSTOG00000002508) ACACA (ENSSTOG00000002468) #21 TADA2A (ENSSTOG00000002518) #22 DUSP14 (ENSSTOG00000002528) #23 SYNRG (ENSSTOG00000002530) #24 DDX52 (ENSSTOG00000002550) #25 HNF1B (ENSSTOG00000012440) #27 HEATR6 (ENSSTOG00000026901) #28 ENSSTOG00000032858 ENSSTOG00000013313 #30 ENSSTOG00000027458 ##30 ENSSTOG00000031610 ENSSTOG00000027899 ##30 ENSSTOG00000034887 ##30 CCL14 (ENSSTOG00000033490) ##30 ENSSTOG00000015833 #34 HEATR9 (ENSSTOG00000028751) #35 TAF15 (ENSSTOG00000002081) #36 Arctic ground squirrel MODERN SPECIES 193 PPM1D (ENSUPAG00010011169) ENSUPAG00010011175 APPBP2 (ENSUPAG00010011180) CHCT1 (ENSUPAG00010011193) #7 ENSUPAG00010011211 #10 CA4 (ENSUPAG00010011234) ENSUPAG00010011238 MYO19 (ENSUPAG00010011260) #12 GGNBP2 (ENSUPAG00010011289) #13 DHRS11 (ENSUPAG00010011375) #14 MRM1 (ENSUPAG00010011380) #15 LHX1 (ENSUPAG00010011394) #18 AATF (ENSUPAG00010011404) #19 ACACA (ENSUPAG00010011440) #21 C17orf78 (ENSUPAG00010011568) TADA2A (ENSUPAG00010011582) #22 DUSP14 (ENSUPAG00010011617) #23 SYNRG (ENSUPAG00010011623) #24 DDX52 (ENSUPAG00010012034) #25 HNF1B (ENSUPAG00010012073) #27 HEATR6 (ENSUPAG00010012102) #28 ENSUPAG00010012127 Alpin marmot MODERN SPECIES 42 ENSMMMG00000019748 APPBP2 (ENSMMMG00000019739) CHCT1 (ENSMMMG00000019735) #7 ENSMMMG00000019716 #10 ENSMMMG00000019712 ZNHIT3 (ENSMMMG00000019709) #11 MYO19 (ENSMMMG00000019686) #12 PIGW (ENSMMMG00000019680) GGNBP2 (ENSMMMG00000019594) #13 DHRS11 (ENSMMMG00000019586) #14 MRM1 (ENSMMMG00000019574) #15 LHX1 (ENSMMMG00000019565) #18 ENSMMMG00000019558 ACACA (ENSMMMG00000019480) #21 C17orf78 (ENSMMMG00000019471) TADA2A (ENSMMMG00000019464) #22 DUSP14 (ENSMMMG00000019458) #23 SYNRG (ENSMMMG00000019201) #24 DDX52 (ENSMMMG00000019175) #25 ENSMMMG00000019174 ENSMMMG00000019173 HNF1B (ENSMMMG00000019142) #27 HEATR6 (ENSMMMG00000019131) #28 ENSMMMG00000019129 ENSMMMG00000019125 #29 ENSMMMG00000019119 #30 ENSMMMG00000019116 ENSMMMG00000019105 ##30 ENSMMMG00000019093 ##30 ENSMMMG00000019090 ##30 ENSMMMG00000019088 Eurasian red squirrel MODERN SPECIES 12 APPBP2 (ENSSVLG00005007432) CHCT1 (ENSSVLG00005007474) #7 ENSSVLG00005007515 #10 CA4 (ENSSVLG00005007650) ZNHIT3 (ENSSVLG00005007716) #11 ENSSVLG00005007764 #12 PIGW (ENSSVLG00005007830) GGNBP2 (ENSSVLG00005007850) #13 DHRS11 (ENSSVLG00005007894) #14 MRM1 (ENSSVLG00005007932) #15 LHX1 (ENSSVLG00005007965) #18 AATF (ENSSVLG00005008003) #19 ACACA (ENSSVLG00005008078) #21 ENSSVLG00005008470 ENSSVLG00005008508 TADA2A (ENSSVLG00005008528) #22 ENSSVLG00005008610 SYNRG (ENSSVLG00005008671) #24 DDX52 (ENSSVLG00005008941) #25 HNF1B (ENSSVLG00005008984) #27 HEATR6 (ENSSVLG00005009203) #28 ENSSVLG00005009414 ENSSVLG00005009438 ENSSVLG00005009477 #30 ENSSVLG00005009573 ##30 ENSSVLG00005009611 ##30 ENSSVLG00005009720 ENSSVLG00005009747 ##30 CCL14 (ENSSVLG00005009782) ##30 CCL16 (ENSSVLG00005009830) ##30 ENSSVLG00005009862 #34 Rodentia_B ANCESTRAL SPECIES 1 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT00940000165476 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 Kangaroo rat MODERN SPECIES 338 Tbx2 (ENSDORG00000024193) Bcas3 (ENSDORG00000004366) Ppm1d (ENSDORG00000004364) Appbp2 (ENSDORG00000025450) Chct1 (ENSDORG00000013035) #7 Usp32 (ENSDORG00000016159) #10 Car4 (ENSDORG00000007143) Znhit3 (ENSDORG00000029572) #11 Myo19 (ENSDORG00000012276) #12 Ggnbp2 (ENSDORG00000013265) #13 Dhrs11 (ENSDORG00000013266) #14 Mrm1 (ENSDORG00000013267) #15 Lhx1 (ENSDORG00000006956) #18 ENSDORG00000006957 Acaca (ENSDORG00000006958) #21 Tada2a (ENSDORG00000009547) #22 Dusp14 (ENSDORG00000025341) #23 Synrg (ENSDORG00000004275) #24 Ddx52 (ENSDORG00000004276) #25 Hnf1b (ENSDORG00000009669) #27 Heatr6 (ENSDORG00000011214) #28 Wfdc21 (ENSDORG00000024216) Ccl4 (ENSDORG00000026295) #30 Ccl5 (ENSDORG00000007688) #34 ENSDORG00000003141 #35 Taf15 (ENSDORG00000014619) #36 Mmp28 (ENSDORG00000003809) #37 1700020L24Rik (ENSDORG00000003808) ENSDORG00000026155 Rasl10b (ENSDORG00000003805) Ap2b1 (ENSDORG00000003803) Myomorpha ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT00940000165476 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 Muroidea ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT01100000263482.C.c.b.a.b.a.m ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 Cricetidae ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879.e ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT01100000263482.C.c.b.a.b.a.m ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879.e ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT01100000263482.C.c.b.a.b.a.m ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 Prairie vole MODERN SPECIES 15 Snn (ENSMOCG00000015655) Txndc11 (ENSMOCG00000016648) Zc3h7a (ENSMOCG00000016255) Rsl1d1 (ENSMOCG00000017724) Gspt1 (ENSMOCG00000019604) Tnfrsf17 (ENSMOCG00000013695) Snx29 (ENSMOCG00000006809) ENSMOCG00000021741 Cpped1 (ENSMOCG00000002062) Shisa9 (ENSMOCG00000022752) ENSMOCG00000021004 Lhx1 (ENSMOCG00000012864) #18 Aatf (ENSMOCG00000021199) #19 Acaca (ENSMOCG00000006469) #21 Gm11437 (ENSMOCG00000015056) Tada2a (ENSMOCG00000007050) #22 Dusp14 (ENSMOCG00000011337) #23 Synrg (ENSMOCG00000021006) #24 Ddx52 (ENSMOCG00000009654) #25 Hnf1b (ENSMOCG00000012217) #27 Heatr6 (ENSMOCG00000015431) #28 Wfdc21 (ENSMOCG00000019007) ENSMOCG00000016372 ENSMOCG00000013687 Ccl4 (ENSMOCG00000012149) #30 ENSMOCG00000013583 ##30 ENSMOCG00000012772 ENSMOCG00000002418 Ccl5 (ENSMOCG00000020386) #34 Heatr9 (ENSMOCG00000009616) #35 Taf15 (ENSMOCG00000015121) #36 Northern American deer mouse MODERN SPECIES 21 Ppm1d (ENSPEMG00000023276) Appbp2 (ENSPEMG00000022734) Chct1 (ENSPEMG00000003353) #7 Usp32 (ENSPEMG00000004467) #10 Car4 (ENSPEMG00000010937) Znhit3 (ENSPEMG00000028356) #11 Myo19 (ENSPEMG00000022948) #12 Pigw (ENSPEMG00000023553) Ggnbp2 (ENSPEMG00000022930) #13 Dhrs11 (ENSPEMG00000021946) #14 Mrm1 (ENSPEMG00000030596) #15 Lhx1 (ENSPEMG00000024834) #18 Aatf (ENSPEMG00000022006) #19 Acaca (ENSPEMG00000023800) #21 Gm11437 (ENSPEMG00000021648) Tada2a (ENSPEMG00000022544) #22 Dusp14 (ENSPEMG00000030837) #23 Synrg (ENSPEMG00000025919) #24 Ddx52 (ENSPEMG00000003263) #25 Hnf1b (ENSPEMG00000023625) #27 Heatr6 (ENSPEMG00000022934) #28 Wfdc21 (ENSPEMG00000025133) ENSPEMG00000021537 #30 ENSPEMG00000021998 ENSPEMG00000022266 ENSPEMG00000026902 #30 ENSPEMG00000028019 #30 ENSPEMG00000025016 #30 ENSPEMG00000027305 #30 ENSPEMG00000026681 ENSPEMG00000030825 #30 Cricetinae ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879.f ENSGT00530000064879.e ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT00940000165476.c ENSGT00940000165476.d ENSGT01100000263482.D #34 ENSGT00390000007247 #35 Chinese hamster chok1gshd MODERN SPECIES 33 Chct1 (ENSCGRG00001006750) #7 ENSCGRG00001023587 ENSCGRG00001013461 Usp32 (ENSCGRG00001020062) #10 Car4 (ENSCGRG00001008651) ENSCGRG00001019811 #11 Myo19 (ENSCGRG00001016014) #12 Pigw (ENSCGRG00001001433) Ggnbp2 (ENSCGRG00001004400) #13 Dhrs11 (ENSCGRG00001017376) #14 Mrm1 (ENSCGRG00001001937) #15 Lhx1 (ENSCGRG00001018330) #18 Aatf (ENSCGRG00001005527) #19 Gm11437 (ENSCGRG00001012632) Acaca (ENSCGRG00001022253) #21 Tada2a (ENSCGRG00001018460) #22 Dusp14 (ENSCGRG00001010127) #23 Synrg (ENSCGRG00001021744) #24 Ddx52 (ENSCGRG00001020695) #25 Hnf1b (ENSCGRG00001022328) #27 Heatr6 (ENSCGRG00001000753) #28 Wfdc21 (ENSCGRG00001020449) ENSCGRG00001019205 ENSCGRG00001018407 Ccl4 (ENSCGRG00001020791) #30 Ccl3 (ENSCGRG00001019421) ##30 Ccl6 (ENSCGRG00001008290) ##30 ENSCGRG00001017750 Ccl5 (ENSCGRG00001017129) #34 Heatr9 (ENSCGRG00001019308) #35 Taf15 (ENSCGRG00001012011) #36 Golden Hamster MODERN SPECIES 684 Ppm1d (ENSMAUG00000021070) Appbp2 (ENSMAUG00000017006) ENSMAUG00000000696 #7 Usp32 (ENSMAUG00000021723) #10 Car4 (ENSMAUG00000008867) Znhit3 (ENSMAUG00000015879) #11 Myo19 (ENSMAUG00000008695) #12 Pigw (ENSMAUG00000022126) Ggnbp2 (ENSMAUG00000020953) #13 Dhrs11 (ENSMAUG00000011459) #14 Mrm1 (ENSMAUG00000020976) #15 Lhx1 (ENSMAUG00000003621) #18 Aatf (ENSMAUG00000004548) #19 Acaca (ENSMAUG00000017414) #21 Gm11437 (ENSMAUG00000013814) Tada2a (ENSMAUG00000009253) #22 Dusp14 (ENSMAUG00000015817) #23 Synrg (ENSMAUG00000015507) #24 Ddx52 (ENSMAUG00000021084) #25 ENSMAUG00000007943 Hnf1b (ENSMAUG00000009573) #27 Heatr6 (ENSMAUG00000009627) #28 Wfdc21 (ENSMAUG00000018673) ENSMAUG00000009975 Ccl4 (ENSMAUG00000020742) #30 Ccl3 (ENSMAUG00000021167) ##30 ENSMAUG00000015635 ENSMAUG00000021412 Ccl5 (ENSMAUG00000000781) #34 Heatr9 (ENSMAUG00000019408) #35 ENSMAUG00000018386 #36 Murinae ANCESTRAL SPECIES 6 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879.h ENSGT00530000064879.g ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT01100000263482.C.c.b.a.b.a.m ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Mus ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879.h ENSGT00530000064879.g ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT01100000263482.C.c.b.a.b.a.m ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879.h ENSGT00530000064879.g.c ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT01100000263482.C.c.b.a.b.a.m ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879.h ENSGT00530000064879.g.c ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT01100000263482.C.c.b.a.b.a.m ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Mouse MODERN SPECIES 2 Ppm1d (ENSMUSG00000020525) Appbp2 (ENSMUSG00000018481) Chct1 (ENSMUSG00000018479) #7 Usp32 (ENSMUSG00000000804) #10 Car4 (ENSMUSG00000000805) Znhit3 (ENSMUSG00000020526) #11 Myo19 (ENSMUSG00000020527) #12 Pigw (ENSMUSG00000045140) Ggnbp2 (ENSMUSG00000020530) #13 Dhrs11 (ENSMUSG00000034449) #14 Mrm1 (ENSMUSG00000018405) #15 Lhx1 (ENSMUSG00000018698) #18 Aatf (ENSMUSG00000018697) #19 Gm11437 (ENSMUSG00000051452) Acaca (ENSMUSG00000020532) #21 Tada2a (ENSMUSG00000018651) #22 Dusp14 (ENSMUSG00000018648) #23 Synrg (ENSMUSG00000034940) #24 Ddx52 (ENSMUSG00000020677) #25 Hnf1b (ENSMUSG00000020679) #27 Heatr6 (ENSMUSG00000000976) #28 Wfdc21 (ENSMUSG00000051748) Wfdc18 (ENSMUSG00000000983) Wfdc17 (ENSMUSG00000069792) Ccl4 (ENSMUSG00000018930) #30 Ccl3 (ENSMUSG00000000982) ##30 Ccl6 (ENSMUSG00000018927) ##30 Ccl9 (ENSMUSG00000019122) ##30 Ccl5 (ENSMUSG00000035042) #34 Heatr9 (ENSMUSG00000018925) #35 Taf15 (ENSMUSG00000020680) #36 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879.h ENSGT00530000064879.g.c ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a.n ##30 ENSGT01100000263482.C.c.b.a.b.a.m ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Steppe mouse MODERN SPECIES 3305 ENSMSIG00000011045 Chct1 (ENSMSIG00000011050) #7 Usp32 (ENSMSIG00000011103) #10 ENSMSIG00000011217 Car4 (ENSMSIG00000011228) Znhit3 (ENSMSIG00000011245) #11 Myo19 (ENSMSIG00000011255) #12 Pigw (ENSMSIG00000011294) Ggnbp2 (ENSMSIG00000011309) #13 Dhrs11 (ENSMSIG00000011441) #14 Mrm1 (ENSMSIG00000011460) #15 Lhx1 (ENSMSIG00000011492) #18 Aatf (ENSMSIG00000011523) #19 Acaca (ENSMSIG00000011559) #21 Gm11437 (ENSMSIG00000011800) Tada2a (ENSMSIG00000011818) #22 Dusp14 (ENSMSIG00000011867) #23 Synrg (ENSMSIG00000011874) #24 Ddx52 (ENSMSIG00000012043) #25 Hnf1b (ENSMSIG00000012071) #27 Heatr6 (ENSMSIG00000012205) #28 Wfdc21 (ENSMSIG00000012277) Wfdc18 (ENSMSIG00000012297) Wfdc17 (ENSMSIG00000012316) ENSMSIG00000012323 ENSMSIG00000012332 ENSMSIG00000012344 Ccl4 (ENSMSIG00000012352) #30 Ccl3 (ENSMSIG00000012367) ##30 Ccl6 (ENSMSIG00000012387) ##30 Ccl9 (ENSMSIG00000012396) ##30 spretus MODERN SPECIES 2 Ppm1d (MGP_SPRETEiJ_G0017751) MGP_SPRETEiJ_G0017750 Chct1 (MGP_SPRETEiJ_G0017749) #7 Usp32 (MGP_SPRETEiJ_G0017748) #10 Car4 (MGP_SPRETEiJ_G0017747) Znhit3 (MGP_SPRETEiJ_G0017746) #11 Myo19 (MGP_SPRETEiJ_G0017745) #12 Pigw (MGP_SPRETEiJ_G0017744) Ggnbp2 (MGP_SPRETEiJ_G0017743) #13 Dhrs11 (MGP_SPRETEiJ_G0017742) #14 Mrm1 (MGP_SPRETEiJ_G0017741) #15 Lhx1 (MGP_SPRETEiJ_G0017740) #18 Aatf (MGP_SPRETEiJ_G0017739) #19 Gm11437 (MGP_SPRETEiJ_G0017738) Acaca (MGP_SPRETEiJ_G0017737) #21 Tada2a (MGP_SPRETEiJ_G0017736) #22 Dusp14 (MGP_SPRETEiJ_G0017735) #23 Synrg (MGP_SPRETEiJ_G0017734) #24 Ddx52 (MGP_SPRETEiJ_G0017733) #25 Hnf1b (MGP_SPRETEiJ_G0017732) #27 Heatr6 (MGP_SPRETEiJ_G0017731) #28 Wfdc21 (MGP_SPRETEiJ_G0017730) Wfdc18 (MGP_SPRETEiJ_G0017729) Wfdc17 (MGP_SPRETEiJ_G0017728) Ccl4 (MGP_SPRETEiJ_G0017727) #30 Ccl3 (MGP_SPRETEiJ_G0017726) ##30 MGP_SPRETEiJ_G0017725 Ccl6 (MGP_SPRETEiJ_G0017724) ##30 Ccl9 (MGP_SPRETEiJ_G0017723) ##30 Ccl5 (MGP_SPRETEiJ_G0017722) #34 Heatr9 (MGP_SPRETEiJ_G0017721) #35 Ryukyu mouse MODERN SPECIES 2 Ppm1d (MGP_CAROLIEiJ_G0016906) Appbp2 (MGP_CAROLIEiJ_G0016905) Chct1 (MGP_CAROLIEiJ_G0016904) #7 Usp32 (MGP_CAROLIEiJ_G0016903) #10 Car4 (MGP_CAROLIEiJ_G0016902) Znhit3 (MGP_CAROLIEiJ_G0016901) #11 Myo19 (MGP_CAROLIEiJ_G0016900) #12 Pigw (MGP_CAROLIEiJ_G0016899) Ggnbp2 (MGP_CAROLIEiJ_G0016898) #13 Dhrs11 (MGP_CAROLIEiJ_G0016897) #14 Mrm1 (MGP_CAROLIEiJ_G0016896) #15 Lhx1 (MGP_CAROLIEiJ_G0016895) #18 Aatf (MGP_CAROLIEiJ_G0016894) #19 Gm11437 (MGP_CAROLIEiJ_G0016893) Acaca (MGP_CAROLIEiJ_G0016892) #21 Tada2a (MGP_CAROLIEiJ_G0016891) #22 Dusp14 (MGP_CAROLIEiJ_G0016890) #23 Synrg (MGP_CAROLIEiJ_G0016889) #24 Ddx52 (MGP_CAROLIEiJ_G0016888) #25 Hnf1b (MGP_CAROLIEiJ_G0016887) #27 Heatr6 (MGP_CAROLIEiJ_G0016886) #28 Wfdc21 (MGP_CAROLIEiJ_G0016885) Wfdc18 (MGP_CAROLIEiJ_G0016884) Wfdc17 (MGP_CAROLIEiJ_G0016883) Ccl4 (MGP_CAROLIEiJ_G0016882) #30 Ccl3 (MGP_CAROLIEiJ_G0016881) ##30 Ccl6 (MGP_CAROLIEiJ_G0016880) ##30 Ccl9 (MGP_CAROLIEiJ_G0016879) ##30 Ccl5 (MGP_CAROLIEiJ_G0016878) #34 Heatr9 (MGP_CAROLIEiJ_G0016877) #35 Taf15 (MGP_CAROLIEiJ_G0016876) #36 Shrew mouse MODERN SPECIES 5 Ppm1d (MGP_PahariEiJ_G0018036) Appbp2 (MGP_PahariEiJ_G0018035) Chct1 (MGP_PahariEiJ_G0018034) #7 Usp32 (MGP_PahariEiJ_G0018033) #10 Car4 (MGP_PahariEiJ_G0018032) Znhit3 (MGP_PahariEiJ_G0018031) #11 Myo19 (MGP_PahariEiJ_G0018030) #12 Pigw (MGP_PahariEiJ_G0018029) Ggnbp2 (MGP_PahariEiJ_G0018028) #13 Dhrs11 (MGP_PahariEiJ_G0018027) #14 Mrm1 (MGP_PahariEiJ_G0018026) #15 Lhx1 (MGP_PahariEiJ_G0018025) #18 Aatf (MGP_PahariEiJ_G0018024) #19 Gm11437 (MGP_PahariEiJ_G0018023) Acaca (MGP_PahariEiJ_G0018022) #21 Tada2a (MGP_PahariEiJ_G0018021) #22 Dusp14 (MGP_PahariEiJ_G0018020) #23 Synrg (MGP_PahariEiJ_G0018019) #24 Ddx52 (MGP_PahariEiJ_G0018018) #25 Hnf1b (MGP_PahariEiJ_G0018017) #27 Heatr6 (MGP_PahariEiJ_G0018016) #28 Wfdc21 (MGP_PahariEiJ_G0018015) Ccl4 (MGP_PahariEiJ_G0018013) #30 Ccl3 (MGP_PahariEiJ_G0018012) ##30 Ccl6 (MGP_PahariEiJ_G0018011) ##30 Ccl9 (MGP_PahariEiJ_G0018010) ##30 Ccl5 (MGP_PahariEiJ_G0018009) #34 Heatr9 (MGP_PahariEiJ_G0018008) #35 Taf15 (MGP_PahariEiJ_G0018007) #36 Mmp28 (MGP_PahariEiJ_G0018006) #37 1700020L24Rik (MGP_PahariEiJ_G0018005) Rat MODERN SPECIES 1 ENSRNOG00000069734 Usp32 (ENSRNOG00000027711) #10 ENSRNOG00000067083 Car4 (ENSRNOG00000002916) Znhit3 (ENSRNOG00000063476) #11 Myo19 (ENSRNOG00000002852) #12 Pigw (ENSRNOG00000027857) Ggnbp2 (ENSRNOG00000027860) #13 Ube2i (ENSRNOG00000017907) Dhrs11 (ENSRNOG00000027891) #14 Mrm1 (ENSRNOG00000027901) #15 Lhx1 (ENSRNOG00000002812) #18 Aatf (ENSRNOG00000002778) #19 LOC102552988 (ENSRNOG00000028116) Acaca (ENSRNOG00000034013) #21 Tada2a (ENSRNOG00000002757) #22 Dusp14 (ENSRNOG00000030091) #23 Ac1576 (ENSRNOG00000058372) Synrg (ENSRNOG00000053814) #24 Ddx52 (ENSRNOG00000002612) #25 Hnf1b (ENSRNOG00000002598) #27 Heatr6 (ENSRNOG00000002542) #28 Wfdc21 (ENSRNOG00000029668) AABR07030143.1 (ENSRNOG00000057390) Wfdc18 (ENSRNOG00000037097) ENSRNOG00000067505 Anos1 (ENSRNOG00000002497) ENSRNOG00000066744 LOC100909660 (ENSRNOG00000066869) LOC103695128 (ENSRNOG00000051084) ENSRNOG00000070672 Upper Galilee mountains blind mole rat MODERN SPECIES 1422 Tada2a (ENSNGAG00000019511) #22 Dusp14 (ENSNGAG00000000587) #23 Synrg (ENSNGAG00000000321) #24 Ddx52 (ENSNGAG00000020686) #25 Hnf1b (ENSNGAG00000017601) #27 Heatr6 (ENSNGAG00000016534) #28 Wfdc21 (ENSNGAG00000012983) ENSNGAG00000017535 #29 Ccl4 (ENSNGAG00000003228) #30 Ccl3 (ENSNGAG00000003991) ##30 ENSNGAG00000006220 Ccl5 (ENSNGAG00000003622) #34 Heatr9 (ENSNGAG00000011711) #35 Taf15 (ENSNGAG00000017633) #36 ENSNGAG00000015117 Mmp28 (ENSNGAG00000014473) #37 Lesser Egyptian jerboa MODERN SPECIES 112 Ppm1d (ENSJJAG00000024338) Appbp2 (ENSJJAG00000018940) Chct1 (ENSJJAG00000008525) #7 Usp32 (ENSJJAG00000013153) #10 Car4 (ENSJJAG00000024230) Znhit3 (ENSJJAG00000021789) #11 Myo19 (ENSJJAG00000018388) #12 Ggnbp2 (ENSJJAG00000020699) #13 Dhrs11 (ENSJJAG00000006482) #14 Mrm1 (ENSJJAG00000010068) #15 Lhx1 (ENSJJAG00000024155) #18 Aatf (ENSJJAG00000000330) #19 Acaca (ENSJJAG00000016405) #21 Gm11437 (ENSJJAG00000004019) ENSJJAG00000010620 Tada2a (ENSJJAG00000014360) #22 Dusp14 (ENSJJAG00000010198) #23 Synrg (ENSJJAG00000021827) #24 Ddx52 (ENSJJAG00000021877) #25 Hnf1b (ENSJJAG00000011207) #27 Heatr6 (ENSJJAG00000012154) #28 Wfdc21 (ENSJJAG00000014661) ENSJJAG00000023138 #29 Ccl4 (ENSJJAG00000011404) #30 Ccl3 (ENSJJAG00000022032) ##30 Ccl5 (ENSJJAG00000024069) #34 Heatr9 (ENSJJAG00000012557) #35 Taf15 (ENSJJAG00000010606) #36 Mmp28 (ENSJJAG00000009319) #37 1700020L24Rik (ENSJJAG00000011369) ENSJJAG00000020015 Lagomorpha ANCESTRAL SPECIES ENSGT00390000006454 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000165089 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00940000165476.b ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 ENSGT00940000159596 #37 Rabbit MODERN SPECIES 10 BCAS3 (ENSOCUG00000010794) ENSOCUG00000029614 APPBP2 (ENSOCUG00000009419) CHCT1 (ENSOCUG00000009414) #7 ENSOCUG00000009402 #10 ENSOCUG00000009399 ENSOCUG00000000920 #11 MYO19 (ENSOCUG00000000921) #12 PIGW (ENSOCUG00000000924) GGNBP2 (ENSOCUG00000000925) #13 DHRS11 (ENSOCUG00000021228) #14 MRM1 (ENSOCUG00000012149) #15 LHX1 (ENSOCUG00000024664) #18 AATF (ENSOCUG00000014434) #19 ACACA (ENSOCUG00000014453) #21 TADA2A (ENSOCUG00000014504) #22 DUSP14 (ENSOCUG00000009880) #23 SYNRG (ENSOCUG00000014519) #24 DDX52 (ENSOCUG00000014532) #25 HNF1B (ENSOCUG00000003682) #27 HEATR6 (ENSOCUG00000003690) #28 ENSOCUG00000036945 ENSOCUG00000026206 ENSOCUG00000000771 ##30 ENSOCUG00000000686 CCL14 (ENSOCUG00000002849) ##30 ENSOCUG00000002848 #34 HEATR9 (ENSOCUG00000002842) #35 TAF15 (ENSOCUG00000002838) #36 MMP28 (ENSOCUG00000004089) #37 C17orf50 (ENSOCUG00000004084) Pika MODERN SPECIES 121 TADA2A (ENSOPRG00000003802) #22 DUSP14 (ENSOPRG00000003841) #23 SYNRG (ENSOPRG00000003846) #24 DDX52 (ENSOPRG00000003899) #25 HNF1B (ENSOPRG00000003933) #27 Tree shrew MODERN SPECIES 3499 ENSTBEG00000003094 TADA2A (ENSTBEG00000003642) #22 DUSP14 (ENSTBEG00000004403) #23 SYNRG (ENSTBEG00000004436) #24 DDX52 (ENSTBEG00000005982) #25 HNF1B (ENSTBEG00000007107) #27 Primates ANCESTRAL SPECIES 3 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Haplorrhini ANCESTRAL SPECIES 6 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Simiiformes ANCESTRAL SPECIES 7 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.a.i #30 ENSGT01100000263482.C.c.b.b.a.b.a ##30 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT00940000161690 ENSGT00390000018397 Catarrhini ANCESTRAL SPECIES 8 ENSGT01050000245374 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.a.i #30 ENSGT01100000263482.C.c.b.b.a.b.a.a ##30 ENSGT01050000245362 ENSGT01100000263482.C.c.a.j.b #30 ENSGT01100000263482.C.c.b.b.a.b.a.b ##30 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.a.b.a.h ##30 ENSGT01100000263482.C.c.b.a.b.a.g ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 Hominoidea ANCESTRAL SPECIES 36 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00950000183120.e.b.a.b ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 Hominidae ANCESTRAL SPECIES 34 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00950000183120.e.b.a.b ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##30 ENSGT01100000263482.C.c.a.j.a #30 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00950000183120.e.b.a.b ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000163624 ENSGT00940000155246.j.b.b ENSGT00390000012679 ENSGT00940000160776 ENSGT00940000156314 ENSGT00940000157982.b ENSGT00860000135964 ENSGT00940000157961.C ENSGT00940000153451.a.a.a ENSGT00940000158572 ENSGT00550000076427 Homo/Pan group ANCESTRAL SPECIES 2 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##30 ENSGT01100000263482.C.c.a.j.a #30 ENSGT00940000163624 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000155246.j.b.b ENSGT00390000012679 ENSGT00940000160776 ENSGT00940000156314 ENSGT00940000157982.b ENSGT00860000135964 ENSGT00940000157961.C ENSGT00940000153451.a.a.a ENSGT00940000158572 ENSGT00550000076427 ENSGT00390000004574 Pan ANCESTRAL SPECIES 3 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##30 ENSGT01100000263482.C.c.a.j.a #30 ENSGT00940000163624 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00910000146738 ENSGT00940000155246.j.b.b ENSGT00390000012679 ENSGT00940000160776 ENSGT00940000156314 ENSGT00940000157982.b ENSGT00860000135964 ENSGT00940000157961.C ENSGT00940000153451.a.a.a ENSGT00940000158572 ENSGT00550000076427 Bonobo MODERN SPECIES 8 CCL23 (ENSPPAG00000032672) ##30 CCL18 (ENSPPAG00000038398) ##30 ENSPPAG00000000041 ##30 CCL4 (ENSPPAG00000014523) #30 ZNHIT3 (ENSPPAG00000007469) #11 MYO19 (ENSPPAG00000034137) #12 PIGW (ENSPPAG00000025159) GGNBP2 (ENSPPAG00000011629) #13 DHRS11 (ENSPPAG00000030903) #14 MRM1 (ENSPPAG00000043135) #15 ENSPPAG00000037724 LHX1 (ENSPPAG00000040860) #18 AATF (ENSPPAG00000041330) #19 C17orf78 (ENSPPAG00000040040) ACACA (ENSPPAG00000041732) #21 TADA2A (ENSPPAG00000041725) #22 DUSP14 (ENSPPAG00000015794) #23 SYNRG (ENSPPAG00000032385) #24 DDX52 (ENSPPAG00000028453) #25 HNF1B (ENSPPAG00000040900) #27 ENSPPAG00000035466 ENSPPAG00000032841 GPR179 (ENSPPAG00000039490) SOCS7 (ENSPPAG00000027368) ENSPPAG00000033631 ENSPPAG00000030363 SRCIN1 (ENSPPAG00000030318) MLLT6 (ENSPPAG00000043999) ENSPPAG00000006335 CISD3 (ENSPPAG00000033971) PCGF2 (ENSPPAG00000038230) Chimpanzee MODERN SPECIES 8 CCL18 (ENSPTRG00000009037) ##30 CCL3 (ENSPTRG00000009039) ##30 CCL4 (ENSPTRG00000030907) #30 ENSPTRG00000008852 ZNHIT3 (ENSPTRG00000009043) #11 MYO19 (ENSPTRG00000009044) #12 PIGW (ENSPTRG00000030908) GGNBP2 (ENSPTRG00000009046) #13 DHRS11 (ENSPTRG00000009048) #14 MRM1 (ENSPTRG00000009049) #15 ENSPTRG00000052647 LHX1 (ENSPTRG00000009050) #18 AATF (ENSPTRG00000009051) #19 C17H17orf78 (ENSPTRG00000009053) ACACA (ENSPTRG00000009052) #21 TADA2A (ENSPTRG00000009054) #22 DUSP14 (ENSPTRG00000050415) #23 SYNRG (ENSPTRG00000009057) #24 DDX52 (ENSPTRG00000009058) #25 HNF1B (ENSPTRG00000009059) #27 ENSPTRG00000044704 TBC1D3B (ENSPTRG00000034386) ENSPTRG00000043187 #30 ENSPTRG00000045727 ##30 ENSPTRG00000043472 MRPL45 (ENSPTRG00000009065) GPR179 (ENSPTRG00000009067) SOCS7 (ENSPTRG00000051106) ARHGAP23 (ENSPTRG00000050966) ENSPTRG00000051759 SRCIN1 (ENSPTRG00000009070) Human MODERN SPECIES 8 CCL4L2 (ENSG00000276070) #30 TBC1D3I (ENSG00000274933) TBC1D3G (ENSG00000260287) TBC1D3H (ENSG00000274226) TBC1D3F (ENSG00000275954) ZNHIT3 (ENSG00000273611) #11 MYO19 (ENSG00000278259) #12 PIGW (ENSG00000277161) GGNBP2 (ENSG00000278311) #13 DHRS11 (ENSG00000278535) #14 MRM1 (ENSG00000278619) #15 LHX1 (ENSG00000273706) #18 AATF (ENSG00000275700) #19 ACACA (ENSG00000278540) #21 C17orf78 (ENSG00000278505) TADA2A (ENSG00000276234) #22 DUSP14 (ENSG00000276023) #23 SYNRG (ENSG00000275066) #24 DDX52 (ENSG00000278053) #25 HNF1B (ENSG00000275410) #27 TBC1D3K (ENSG00000273513) TBC1D3L (ENSG00000274512) TBC1D3D (ENSG00000274419) TBC1D3C (ENSG00000278299) TBC1D3E (ENSG00000278599) TBC1D3 (ENSG00000274611) MRPL45 (ENSG00000278845) GPR179 (ENSG00000277399) SOCS7 (ENSG00000274211) ARHGAP23 (ENSG00000275832) SRCIN1 (ENSG00000277363) Gorilla MODERN SPECIES 18 CCL3L1 (ENSGGOG00000028175) ##30 ENSGGOG00000038575 ENSGGOG00000024272 ZNHIT3 (ENSGGOG00000007927) #11 MYO19 (ENSGGOG00000007933) #12 PIGW (ENSGGOG00000007951) GGNBP2 (ENSGGOG00000007954) #13 DHRS11 (ENSGGOG00000007970) #14 MRM1 (ENSGGOG00000007979) #15 ENSGGOG00000039741 LHX1 (ENSGGOG00000002703) #18 AATF (ENSGGOG00000002706) #19 ENSGGOG00000042317 ACACA (ENSGGOG00000017078) #21 ENSGGOG00000006354 TADA2A (ENSGGOG00000012176) #22 DUSP14 (ENSGGOG00000040591) #23 SYNRG (ENSGGOG00000040471) #24 DDX52 (ENSGGOG00000028224) #25 HNF1B (ENSGGOG00000006322) #27 ENSGGOG00000022575 ENSGGOG00000043270 ENSGGOG00000013691 ENSGGOG00000027359 ENSGGOG00000025025 GPR179 (ENSGGOG00000010947) ENSGGOG00000010961 ARHGAP23 (ENSGGOG00000011104) ENSGGOG00000042036 SRCIN1 (ENSGGOG00000005635) EPOP (ENSGGOG00000009275) Orangutan MODERN SPECIES 8 BCAS3 (ENSPPYG00000008797) PPM1D (ENSPPYG00000008517) APPBP2 (ENSPPYG00000008516) ENSPPYG00000037147 CHCT1 (ENSPPYG00000008515) #7 ENSPPYG00000008513 MYO19 (ENSPPYG00000008211) #12 ZNHIT3 (ENSPPYG00000008210) #11 ENSPPYG00000030234 #13 DHRS11 (ENSPPYG00000008213) #14 MRM1 (ENSPPYG00000034525) #15 LHX1 (ENSPPYG00000008214) #18 AATF (ENSPPYG00000008215) #19 ENSPPYG00000008217 ACACA (ENSPPYG00000008216) #21 TADA2A (ENSPPYG00000008218) #22 DUSP14 (ENSPPYG00000008219) #23 SYNRG (ENSPPYG00000008220) #24 DDX52 (ENSPPYG00000008221) #25 HNF1B (ENSPPYG00000008222) #27 ENSPPYG00000034866 ENSPPYG00000033195 ENSPPYG00000008205 #30 CCL3 (ENSPPYG00000038679) ##30 CCL18 (ENSPPYG00000008203) ##30 CCL23 (ENSPPYG00000008202) ##30 CCL15 (ENSPPYG00000041781) ##30 ENSPPYG00000040512 ##30 CCL16 (ENSPPYG00000008200) ##30 LYZL6 (ENSPPYG00000008199) RDM1 (ENSPPYG00000008198) Gibbon MODERN SPECIES 104 ENSNLEG00000002060 ENSNLEG00000033541 ENSNLEG00000035947 ZNHIT3 (ENSNLEG00000002070) #11 MYO19 (ENSNLEG00000002087) #12 GGNBP2 (ENSNLEG00000002197) #13 ENSNLEG00000028425 DHRS11 (ENSNLEG00000002259) #14 MRM1 (ENSNLEG00000002300) #15 ENSNLEG00000034926 LHX1 (ENSNLEG00000002343) #18 AATF (ENSNLEG00000002354) #19 ACACA (ENSNLEG00000002421) #21 ENSNLEG00000033322 C17orf78 (ENSNLEG00000002618) TADA2A (ENSNLEG00000002646) #22 DUSP14 (ENSNLEG00000002727) #23 SYNRG (ENSNLEG00000002737) #24 DDX52 (ENSNLEG00000002826) #25 HNF1B (ENSNLEG00000002919) #27 Cercopithecidae ANCESTRAL SPECIES 6 ENSGT01050000245374 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.a.i #30 ENSGT01100000263482.C.c.b.b.a.b.a.a ##30 ENSGT01050000245362 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.a.b.a.h ##30 ENSGT01100000263482.C.c.b.a.b.a.g ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT00940000161690 Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00940000155797 #10 ENSGT01050000245374 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822.o #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b ##30 ENSGT01100000263482.C.c.a.i.d #30 ENSGT00520000060616 ENSGT00390000016675 #28 ENSGT01100000263482.C.c.a.i.c.a #30 ENSGT00940000163624 ENSGT01100000263482.C.c.a.i.c.b #30 ENSGT01100000263482.C.c.b.b.a.b.a.a.c.a ##30 ENSGT01050000245362 ENSGT01100000263482.C.c.b.b.a.b.a.a.d ##30 ENSGT01100000263482.C.c.b.b.a.b.b ##30 Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00940000155797 #10 ENSGT01050000245374 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822.o #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b ##30 ENSGT01100000263482.C.c.a.i.d #30 ENSGT00520000060616 ENSGT00390000016675 #28 ENSGT01100000263482.C.c.a.i.c.a #30 ENSGT00940000163624 ENSGT01100000263482.C.c.a.i.c.b #30 ENSGT01100000263482.C.c.b.b.a.b.a.a.c.a ##30 ENSGT01050000245362 ENSGT01100000263482.C.c.b.b.a.b.a.a.d ##30 ENSGT01100000263482.C.c.b.b.a.b.b ##30 Macaca ANCESTRAL SPECIES 4 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822.o #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b.a ##30 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.a.b.a.h ##30 ENSGT01100000263482.C.c.b.a.b.a.g ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT00940000161690 ENSGT00390000018397 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Pig-tailed macaque MODERN SPECIES 541 ENSMNEG00000042038 #10 ENSMNEG00000042229 ENSMNEG00000038726 CA4 (ENSMNEG00000037240) ZNHIT3 (ENSMNEG00000031757) #11 MYO19 (ENSMNEG00000043092) #12 PIGW (ENSMNEG00000010275) GGNBP2 (ENSMNEG00000036757) #13 DHRS11 (ENSMNEG00000029082) #14 MRM1 (ENSMNEG00000044557) #15 ENSMNEG00000033194 LHX1 (ENSMNEG00000036471) #18 AATF (ENSMNEG00000041026) #19 ACACA (ENSMNEG00000043362) #21 C17orf78 (ENSMNEG00000036519) TADA2A (ENSMNEG00000038569) #22 DUSP14 (ENSMNEG00000009880) #23 SYNRG (ENSMNEG00000026198) #24 DDX52 (ENSMNEG00000043658) #25 HNF1B (ENSMNEG00000037389) #27 Macaca_a ANCESTRAL SPECIES 4 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822.o #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b.b ##30 ENSGT01100000263482.C.c.a.i.d.b #30 ENSGT00520000060616 ENSGT00390000016675 #28 ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b.a ##30 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a.g ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT00940000161690 Crab-eating macaque MODERN SPECIES 7 APPBP2 (ENSMFAG00000031643) CHCT1 (ENSMFAG00000001841) #7 ENSMFAG00000060869 ENSMFAG00000058900 ENSMFAG00000042248 #10 ENSMFAG00000032685 ZNHIT3 (ENSMFAG00000001234) #11 MYO19 (ENSMFAG00000033731) #12 PIGW (ENSMFAG00000036468) ENSMFAG00000064927 ENSMFAG00000044208 ENSMFAG00000056392 LHX1 (ENSMFAG00000001746) #18 AATF (ENSMFAG00000003108) #19 ACACA (ENSMFAG00000045655) #21 TADA2A (ENSMFAG00000046352) #22 ENSMFAG00000061442 DUSP14 (ENSMFAG00000010455) #23 SYNRG (ENSMFAG00000044562) #24 ENSMFAG00000030603 #27 DDX52 (ENSMFAG00000000640) #25 ENSMFAG00000058779 #27 ENSMFAG00000051245 ENSMFAG00000063676 ENSMFAG00000060658 ENSMFAG00000052110 ENSMFAG00000053936 ##30 ENSMFAG00000047776 #30 ENSMFAG00000057148 ENSMFAG00000060965 #28 ENSMFAG00000029679 #28 Rhesus MODERN SPECIES 7 CHCT1 (ENSMMUG00000016565) #7 ENSMMUG00000052977 ENSMMUG00000017113 #10 CA4 (ENSMMUG00000007917) ZNHIT3 (ENSMMUG00000007918) #11 PIGW (ENSMMUG00000007923) MYO19 (ENSMMUG00000007920) #12 GGNBP2 (ENSMMUG00000000618) #13 DHRS11 (ENSMMUG00000000620) #15 ENSMMUG00000053397 ENSMMUG00000063397 LHX1 (ENSMMUG00000021668) #18 AATF (ENSMMUG00000021669) #19 ACACA (ENSMMUG00000009349) #21 C16H17orf78 (ENSMMUG00000030090) TADA2A (ENSMMUG00000021911) #22 DUSP14 (ENSMMUG00000002975) #23 SYNRG (ENSMMUG00000002976) #24 DDX52 (ENSMMUG00000002980) #25 HNF1B (ENSMMUG00000003431) #27 ENSMMUG00000061594 ENSMMUG00000058233 ##30 HEATR6 (ENSMMUG00000007671) #28 ENSMMUG00000030260 ENSMMUG00000062497 ENSMMUG00000050758 ENSMMUG00000008111 #30 CCL3 (ENSMMUG00000062832) ##30 CCL18 (ENSMMUG00000047114) ##30 CCL23 (ENSMMUG00000002467) CCL15 (ENSMMUG00000039864) ##30 Cercopithecinae_b ANCESTRAL SPECIES 20 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT01050000245374 ENSGT00940000155690 ENSGT00390000010822.o #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016384.f.j.b ENSGT00390000016675 #28 ENSGT01100000263482.C.c.a.i.c.a #30 Olive baboon MODERN SPECIES 8 BCAS3 (ENSPANG00000022159) ENSPANG00000008797 PPM1D (ENSPANG00000022160) APPBP2 (ENSPANG00000022164) CHCT1 (ENSPANG00000022167) #7 ENSPANG00000022153 #10 CA4 (ENSPANG00000022142) ZNHIT3 (ENSPANG00000050701) #11 MYO19 (ENSPANG00000022136) #12 PIGW (ENSPANG00000008702) GGNBP2 (ENSPANG00000022124) #13 LHX1 (ENSPANG00000022127) #18 AATF (ENSPANG00000022128) #19 ENSPANG00000047347 ACACA (ENSPANG00000022130) #21 TADA2A (ENSPANG00000022118) #22 DUSP14 (ENSPANG00000003448) #23 SYNRG (ENSPANG00000022120) #24 DDX52 (ENSPANG00000022101) #25 HNF1B (ENSPANG00000022102) #27 ENSPANG00000032216 HEATR6 (ENSPANG00000009798) #28 CCL18 (ENSPANG00000041083) ##30 ENSPANG00000022938 CCL15 (ENSPANG00000022937) ##30 CCL14 (ENSPANG00000022936) ##30 CCL16 (ENSPANG00000022935) ##30 LYZL6 (ENSPANG00000022934) RDM1 (ENSPANG00000022933) ENSPANG00000030339 #34 HEATR9 (ENSPANG00000022932) #35 Cercopithecinae_d ANCESTRAL SPECIES 7 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT01050000245374 ENSGT00940000155690 ENSGT00390000010822.o #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 Sooty mangabey MODERN SPECIES 617 ENSCATG00000030236 #10 ENSCATG00000040911 CA4 (ENSCATG00000034309) ZNHIT3 (ENSCATG00000035385) #11 MYO19 (ENSCATG00000042003) #12 PIGW (ENSCATG00000007447) GGNBP2 (ENSCATG00000030797) #13 DHRS11 (ENSCATG00000001680) #14 MRM1 (ENSCATG00000041516) #15 ENSCATG00000044337 LHX1 (ENSCATG00000035824) #18 AATF (ENSCATG00000043611) #19 ACACA (ENSCATG00000036167) #21 ENSCATG00000021273 C17orf78 (ENSCATG00000037239) TADA2A (ENSCATG00000030086) #22 DUSP14 (ENSCATG00000043837) #23 SYNRG (ENSCATG00000031190) #24 DDX52 (ENSCATG00000041437) #25 HNF1B (ENSCATG00000045086) #27 Drill MODERN SPECIES 1036 APPBP2 (ENSMLEG00000039106) CHCT1 (ENSMLEG00000044109) #7 ENSMLEG00000038481 ENSMLEG00000042806 #10 CA4 (ENSMLEG00000034715) ZNHIT3 (ENSMLEG00000041589) #11 MYO19 (ENSMLEG00000035545) #12 GGNBP2 (ENSMLEG00000041128) #13 DHRS11 (ENSMLEG00000028362) #14 MRM1 (ENSMLEG00000031933) #15 ENSMLEG00000033898 LHX1 (ENSMLEG00000030942) #18 AATF (ENSMLEG00000033672) #19 C17orf78 (ENSMLEG00000032526) ACACA (ENSMLEG00000028181) #21 TADA2A (ENSMLEG00000034264) #22 DUSP14 (ENSMLEG00000037053) #23 SYNRG (ENSMLEG00000037827) #24 DDX52 (ENSMLEG00000017518) #25 HNF1B (ENSMLEG00000028966) #27 ENSMLEG00000044192 ENSMLEG00000036090 Vervet Monkey MODERN SPECIES 7 PPM1D (ENSCSAG00000005981) APPBP2 (ENSCSAG00000005988) CHCT1 (ENSCSAG00000005993) #7 ENSCSAG00000006004 #10 CA4 (ENSCSAG00000006017) ENSCSAG00000006027 #11 MYO19 (ENSCSAG00000006037) #12 PIGW (ENSCSAG00000000554) GGNBP2 (ENSCSAG00000006044) #13 DHRS11 (ENSCSAG00000006049) #14 MRM1 (ENSCSAG00000006055) #15 LHX1 (ENSCSAG00000006059) #18 AATF (ENSCSAG00000006066) #19 ACACA (ENSCSAG00000006092) #21 C17orf78 (ENSCSAG00000006103) TADA2A (ENSCSAG00000006109) #22 DUSP14 (ENSCSAG00000000555) #23 SYNRG (ENSCSAG00000006116) #24 DDX52 (ENSCSAG00000006122) #25 HNF1B (ENSCSAG00000006125) #27 ENSCSAG00000006128 ##30 ENSCSAG00000006135 #30 HEATR6 (ENSCSAG00000006142) #28 ENSCSAG00000006165 ENSCSAG00000006185 ENSCSAG00000006191 #30 CCL18 (ENSCSAG00000006194) ##30 CCL15 (ENSCSAG00000006198) ##30 CCL14 (ENSCSAG00000006201) ##30 CCL16 (ENSCSAG00000006203) ##30 LYZL6 (ENSCSAG00000006206) Rhinopithecus ANCESTRAL SPECIES 152 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00910000146895 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 Golden snub-nosed monkey MODERN SPECIES 2002 ZNHIT3 (ENSRROG00000033230) #11 MYO19 (ENSRROG00000034127) #12 PIGW (ENSRROG00000004329) GGNBP2 (ENSRROG00000044404) #13 DHRS11 (ENSRROG00000037749) #14 MRM1 (ENSRROG00000041704) #15 ENSRROG00000030991 LHX1 (ENSRROG00000028716) #18 AATF (ENSRROG00000037297) #19 C17orf78 (ENSRROG00000029539) ACACA (ENSRROG00000033447) #21 TADA2A (ENSRROG00000043169) #22 DUSP14 (ENSRROG00000019792) #23 SYNRG (ENSRROG00000040002) #24 DDX52 (ENSRROG00000034760) #25 HNF1B (ENSRROG00000025399) #27 Black snub-nosed monkey MODERN SPECIES 2533 ENSRBIG00000027665 #21 ENSRBIG00000038798 C17orf78 (ENSRBIG00000032290) TADA2A (ENSRBIG00000028840) #22 DUSP14 (ENSRBIG00000027666) #23 SYNRG (ENSRBIG00000042474) #24 DDX52 (ENSRBIG00000032462) #25 HNF1B (ENSRBIG00000034188) #27 Platyrrhini ANCESTRAL SPECIES 1 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520.c ENSGT00390000009552 #13 ENSGT00840000129887.c #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.b.a.b.a ##30 ENSGT00940000165089 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT00940000161690 ENSGT00390000018397 ENSGT01100000263482.D #34 Cebidae ANCESTRAL SPECIES 10 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520.c ENSGT00390000009552 #13 ENSGT00840000129887.c #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.b.a.b.a ##30 ENSGT00940000165089 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT00940000161690 ENSGT00390000018397 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 Marmoset MODERN SPECIES 17 APPBP2 (ENSCJAG00000043808) ENSCJAG00000080142 CHCT1 (ENSCJAG00000001176) #7 ENSCJAG00000001104 #10 CA4 (ENSCJAG00000011248) ENSCJAG00000080872 ZNHIT3 (ENSCJAG00000001093) #11 MYO19 (ENSCJAG00000001068) #12 PIGW (ENSCJAG00000023386) GGNBP2 (ENSCJAG00000001044) #13 DHRS11 (ENSCJAG00000001031) #14 MRM1 (ENSCJAG00000001023) #15 ENSCJAG00000015449 #18 ACACA (ENSCJAG00000015336) #21 ENSCJAG00000015436 TADA2A (ENSCJAG00000015275) #22 DUSP14 (ENSCJAG00000039500) #23 SYNRG (ENSCJAG00000015209) #24 ENSCJAG00000079150 DDX52 (ENSCJAG00000015190) #25 HNF1B (ENSCJAG00000015174) #27 HEATR6 (ENSCJAG00000015089) #28 ENSCJAG00000055053 ENSCJAG00000015069 ##30 ENSCJAG00000039948 ENSCJAG00000063189 ##30 CCL16 (ENSCJAG00000015050) ##30 LYZL6 (ENSCJAG00000015046) RDM1 (ENSCJAG00000015031) ENSCJAG00000061679 ENSCJAG00000065875 #34 Cebidae_a ANCESTRAL SPECIES 1 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520.c ENSGT00390000009552 #13 ENSGT00840000129887.c #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01100000263482.C.c.b.b.a.b.b ##30 ENSGT01100000263482.C.c.b.b.a.b.a ##30 ENSGT00940000165089 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT00940000161690 ENSGT00390000018397 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Bolivian squirrel monkey MODERN SPECIES 74 CHCT1 (ENSSBOG00000034515) #7 ENSSBOG00000005431 ENSSBOG00000019247 ENSSBOG00000020205 #10 CA4 (ENSSBOG00000029608) ZNHIT3 (ENSSBOG00000027184) #11 MYO19 (ENSSBOG00000026064) #12 GGNBP2 (ENSSBOG00000022817) #13 DHRS11 (ENSSBOG00000018252) #14 MRM1 (ENSSBOG00000024145) #15 LHX1 (ENSSBOG00000025624) #18 AATF (ENSSBOG00000026894) #19 ACACA (ENSSBOG00000000679) #21 ENSSBOG00000028931 C17orf78 (ENSSBOG00000028531) TADA2A (ENSSBOG00000012961) #22 DUSP14 (ENSSBOG00000013797) #23 SYNRG (ENSSBOG00000026903) #24 DDX52 (ENSSBOG00000035787) #25 HNF1B (ENSSBOG00000029637) #27 HEATR6 (ENSSBOG00000022182) #28 ENSSBOG00000028016 ##30 ENSSBOG00000027438 ##30 ENSSBOG00000008746 ENSSBOG00000033067 ENSSBOG00000023104 ENSSBOG00000023945 CCL14 (ENSSBOG00000034435) ##30 CCL16 (ENSSBOG00000025408) ##30 LYZL6 (ENSSBOG00000029469) RDM1 (ENSSBOG00000028130) Capuchin MODERN SPECIES 121 C17orf64 (ENSCCAG00000034964) #7 ENSCCAG00000020765 #10 ENSCCAG00000013670 CA4 (ENSCCAG00000021031) ZNHIT3 (ENSCCAG00000021492) #11 MYO19 (ENSCCAG00000029401) #12 ENSCCAG00000030379 GGNBP2 (ENSCCAG00000020660) #13 DHRS11 (ENSCCAG00000037890) #14 MRM1 (ENSCCAG00000020032) #15 LHX1 (ENSCCAG00000035551) #18 AATF (ENSCCAG00000004696) #19 ACACA (ENSCCAG00000020124) #21 C17orf78 (ENSCCAG00000024629) ENSCCAG00000035309 TADA2A (ENSCCAG00000007308) #22 DUSP14 (ENSCCAG00000019407) #23 SYNRG (ENSCCAG00000028418) #24 DDX52 (ENSCCAG00000023213) #25 HNF1B (ENSCCAG00000019903) #27 HEATR6 (ENSCCAG00000034260) #28 ENSCCAG00000035930 ##30 ENSCCAG00000021764 CCL14 (ENSCCAG00000024175) ##30 ENSCCAG00000024194 ENSCCAG00000037920 ENSCCAG00000034491 Mas night monkey MODERN SPECIES 805 CHCT1 (ENSANAG00000027029) #7 ENSANAG00000020996 #10 ENSANAG00000032912 CA4 (ENSANAG00000031964) ZNHIT3 (ENSANAG00000026827) #11 MYO19 (ENSANAG00000029214) #12 GGNBP2 (ENSANAG00000020222) #13 ENSANAG00000038031 #14 MRM1 (ENSANAG00000025500) #15 LHX1 (ENSANAG00000033720) #18 AATF (ENSANAG00000035007) #19 ENSANAG00000027412 C17orf78 (ENSANAG00000034785) ACACA (ENSANAG00000035253) #21 ENSANAG00000031287 TADA2A (ENSANAG00000023226) #22 DUSP14 (ENSANAG00000030312) #23 SYNRG (ENSANAG00000033433) #24 DDX52 (ENSANAG00000028587) #25 HNF1B (ENSANAG00000025408) #27 HEATR6 (ENSANAG00000034625) #28 ENSANAG00000036612 ##30 ENSANAG00000020518 ##30 CCL4L2 (ENSANAG00000032119) #30 ENSANAG00000038290 ##30 CCL14 (ENSANAG00000034460) ##30 CCL16 (ENSANAG00000024769) ##30 LYZL6 (ENSANAG00000034516) RDM1 (ENSANAG00000032752) ENSANAG00000038037 #34 HEATR9 (ENSANAG00000034198) #35 Tarsier MODERN SPECIES 5980 DHRS11 (ENSTSYG00000011826) #14 MRM1 (ENSTSYG00000036380) #15 LHX1 (ENSTSYG00000025930) #18 AATF (ENSTSYG00000000789) #19 ACACA (ENSTSYG00000007665) #21 C17orf78 (ENSTSYG00000005128) TADA2A (ENSTSYG00000002124) #22 DUSP14 (ENSTSYG00000000249) #23 SYNRG (ENSTSYG00000000250) #24 DDX52 (ENSTSYG00000002996) #25 HNF1B (ENSTSYG00000010701) #27 HEATR6 (ENSTSYG00000009632) #28 Strepsirrhini ANCESTRAL SPECIES 4 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Lemuriformes ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Mouse lemur MODERN SPECIES 7 PPM1D (ENSMICG00000014711) APPBP2 (ENSMICG00000030699) CHCT1 (ENSMICG00000013434) #7 ENSMICG00000013391 #10 CA4 (ENSMICG00000013382) ENSMICG00000045176 ZNHIT3 (ENSMICG00000041948) #11 MYO19 (ENSMICG00000004193) #12 GGNBP2 (ENSMICG00000004202) #13 DHRS11 (ENSMICG00000004210) #14 MRM1 (ENSMICG00000004216) #15 LHX1 (ENSMICG00000046353) #18 AATF (ENSMICG00000004226) #19 ACACA (ENSMICG00000004237) #21 C17orf78 (ENSMICG00000029913) TADA2A (ENSMICG00000004263) #22 DUSP14 (ENSMICG00000029118) #23 SYNRG (ENSMICG00000004272) #24 ENSMICG00000004290 #25 HNF1B (ENSMICG00000001274) #27 HEATR6 (ENSMICG00000008703) #28 ENSMICG00000041554 ##30 ENSMICG00000008737 #30 ENSMICG00000038715 ##30 ENSMICG00000042571 ##30 ENSMICG00000029419 ##30 CCL14 (ENSMICG00000027552) ##30 CCL16 (ENSMICG00000029697) ##30 ENSMICG00000042451 #34 HEATR9 (ENSMICG00000001796) #35 TAF15 (ENSMICG00000017057) #36 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT00390000018505.b.j Coquerels sifaka MODERN SPECIES 414 ENSPCOG00000022756 PPM1D (ENSPCOG00000023590) APPBP2 (ENSPCOG00000023992) CHCT1 (ENSPCOG00000023733) #7 ENSPCOG00000026706 #10 CA4 (ENSPCOG00000017632) ZNHIT3 (ENSPCOG00000013676) #11 MYO19 (ENSPCOG00000007949) #12 GGNBP2 (ENSPCOG00000007163) #13 DHRS11 (ENSPCOG00000013070) #14 MRM1 (ENSPCOG00000020871) #15 LHX1 (ENSPCOG00000020883) #18 AATF (ENSPCOG00000022113) #19 C17orf78 (ENSPCOG00000026279) ACACA (ENSPCOG00000018915) #21 TADA2A (ENSPCOG00000012848) #22 DUSP14 (ENSPCOG00000008608) #23 SYNRG (ENSPCOG00000006433) #24 ENSPCOG00000022004 HNF1B (ENSPCOG00000023250) #27 HEATR6 (ENSPCOG00000007339) #28 ENSPCOG00000026656 #30 ENSPCOG00000017450 ##30 ENSPCOG00000018507 ##30 CCL14 (ENSPCOG00000000123) ##30 CCL16 (ENSPCOG00000015310) ##30 ENSPCOG00000012531 ENSPCOG00000009360 #34 HEATR9 (ENSPCOG00000020659) #35 TAF15 (ENSPCOG00000007032) #36 MMP28 (ENSPCOG00000021300) #37 Greater bamboo lemur MODERN SPECIES 59 PPM1D (ENSPSMG00000011798) APPBP2 (ENSPSMG00000011771) CHCT1 (ENSPSMG00000011749) #7 ENSPSMG00000011700 #10 CA4 (ENSPSMG00000011627) ZNHIT3 (ENSPSMG00000011614) #11 MYO19 (ENSPSMG00000011604) #12 PIGW (ENSPSMG00000011565) GGNBP2 (ENSPSMG00000011529) #13 DHRS11 (ENSPSMG00000011489) #14 MRM1 (ENSPSMG00000011470) #15 LHX1 (ENSPSMG00000011466) #18 AATF (ENSPSMG00000011456) #19 ACACA (ENSPSMG00000011387) #21 ENSPSMG00000011258 TADA2A (ENSPSMG00000011223) #22 DUSP14 (ENSPSMG00000011101) #23 SYNRG (ENSPSMG00000011045) #24 DDX52 (ENSPSMG00000010909) #25 HNF1B (ENSPSMG00000010872) #27 Bushbaby MODERN SPECIES 209 CHCT1 (ENSOGAG00000006794) #7 ENSOGAG00000028737 ENSOGAG00000003441 #10 CA4 (ENSOGAG00000003438) ENSOGAG00000031465 ZNHIT3 (ENSOGAG00000005605) #11 MYO19 (ENSOGAG00000024228) #12 PIGW (ENSOGAG00000029683) GGNBP2 (ENSOGAG00000013777) #13 DHRS11 (ENSOGAG00000013780) #14 MRM1 (ENSOGAG00000013785) #15 LHX1 (ENSOGAG00000013789) #18 AATF (ENSOGAG00000013792) #19 ACACA (ENSOGAG00000013795) #21 C17orf78 (ENSOGAG00000013814) TADA2A (ENSOGAG00000000866) #22 DUSP14 (ENSOGAG00000027765) #23 SYNRG (ENSOGAG00000000867) #24 DDX52 (ENSOGAG00000000868) #25 HNF1B (ENSOGAG00000000869) #27 HEATR6 (ENSOGAG00000008153) #28 ENSOGAG00000028390 #30 ENSOGAG00000012746 ##30 ENSOGAG00000001316 ##30 CCL14 (ENSOGAG00000027314) ##30 CCL16 (ENSOGAG00000033836) ##30 ENSOGAG00000011726 #34 HEATR9 (ENSOGAG00000011724) #35 TAF15 (ENSOGAG00000011719) #36 MMP28 (ENSOGAG00000011716) #37 GAS2L2 (ENSOGAG00000031874) Laurasiatheria ANCESTRAL SPECIES 4 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00940000166945 #29 ENSGT01030000238029 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 Laurasiatheria_a ANCESTRAL SPECIES 4 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Artiodactyla ANCESTRAL SPECIES 4 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Suina ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT00940000165089 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00990000211580 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Pig MODERN SPECIES 3 APPBP2 (ENSSSCG00000017678) ENSSSCG00000017679 #7 ENSSSCG00000039473 #10 CA4 (ENSSSCG00000023186) ZNHIT3 (ENSSSCG00000056293) #11 MYO19 (ENSSSCG00000017682) #12 PIGW (ENSSSCG00000035006) GGNBP2 (ENSSSCG00000017688) #13 DHRS11 (ENSSSCG00000058136) #14 MRM1 (ENSSSCG00000017690) #15 LHX1 (ENSSSCG00000017692) #18 AATF (ENSSSCG00000017693) #19 ACACA (ENSSSCG00000017694) #21 ENSSSCG00000043622 C17orf78 (ENSSSCG00000017696) TADA2A (ENSSSCG00000025775) #22 DUSP14 (ENSSSCG00000029874) #23 SYNRG (ENSSSCG00000026596) #24 DDX52 (ENSSSCG00000021275) #25 HNF1B (ENSSSCG00000022417) #27 HEATR6 (ENSSSCG00000038478) #28 ENSSSCG00000061183 ENSSSCG00000053444 ENSSSCG00000063044 ENSSSCG00000031292 #29 ENSSSCG00000039685 CCL4 (ENSSSCG00000032343) CCL3L1 (ENSSSCG00000017700) ##30 ENSSSCG00000047189 ##30 ENSSSCG00000041204 ENSSSCG00000033457 ##30 Chacoan peccary MODERN SPECIES 144 ENSCWAG00000012625 CHCT1 (ENSCWAG00000012559) #7 ENSCWAG00000012341 #10 CA4 (ENSCWAG00000012240) ZNHIT3 (ENSCWAG00000012195) #11 ENSCWAG00000012093 #12 PIGW (ENSCWAG00000012065) GGNBP2 (ENSCWAG00000012011) #13 DHRS11 (ENSCWAG00000011948) #14 MRM1 (ENSCWAG00000011880) #15 ENSCWAG00000011832 LHX1 (ENSCWAG00000011778) #18 AATF (ENSCWAG00000011715) #19 ENSCWAG00000011655 ACACA (ENSCWAG00000010154) #21 TADA2A (ENSCWAG00000009957) #22 DUSP14 (ENSCWAG00000009929) #23 SYNRG (ENSCWAG00000008838) #24 DDX52 (ENSCWAG00000008754) #25 HNF1B (ENSCWAG00000008477) #27 HEATR6 (ENSCWAG00000008120) #28 ENSCWAG00000008066 ENSCWAG00000008047 #29 ENSCWAG00000007931 ENSCWAG00000007883 ##30 ENSCWAG00000007820 ##30 ENSCWAG00000007741 ENSCWAG00000007710 ##30 ENSCWAG00000007687 #34 HEATR9 (ENSCWAG00000007560) #35 TAF15 (ENSCWAG00000007501) #36 Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT00530000064879.a.a ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a.b ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 Camelidae ANCESTRAL SPECIES 66 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000168945 ENSGT00530000064879.a.b ENSGT00940000165089 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01050000245362 ENSGT01100000263482.C.c.b.a.a.b ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Arabian camel MODERN SPECIES 7 ENSCDRG00005006172 APPBP2 (ENSCDRG00005006215) CHCT1 (ENSCDRG00005006298) #7 ENSCDRG00005006373 #10 CA4 (ENSCDRG00005006611) ZNHIT3 (ENSCDRG00005006720) #11 MYO19 (ENSCDRG00005006788) #12 PIGW (ENSCDRG00005006978) GGNBP2 (ENSCDRG00005007012) #13 DHRS11 (ENSCDRG00005007098) #14 MRM1 (ENSCDRG00005007173) #15 LHX1 (ENSCDRG00005007226) #18 AATF (ENSCDRG00005007261) #19 ACACA (ENSCDRG00005007352) #21 C17orf78 (ENSCDRG00005008471) TADA2A (ENSCDRG00005008526) #22 DUSP14 (ENSCDRG00005008629) #23 SYNRG (ENSCDRG00005008681) #24 DDX52 (ENSCDRG00005009459) #25 HNF1B (ENSCDRG00005009598) #27 HEATR6 (ENSCDRG00005010178) #28 ENSCDRG00005010283 ENSCDRG00005010366 ENSCDRG00005010997 ENSCDRG00005011025 ENSCDRG00005011149 ##30 ENSCDRG00005011190 ENSCDRG00005011237 ##30 CCL14 (ENSCDRG00005011268) ##30 CCL16 (ENSCDRG00005011301) ##30 ENSCDRG00005011357 #34 Alpaca MODERN SPECIES 393 ACACA (ENSVPAG00000001969) #21 C17orf78 (ENSVPAG00000001974) TADA2A (ENSVPAG00000001975) #22 SYNRG (ENSVPAG00000001977) #24 DUSP14 (ENSVPAG00000001978) #23 DDX52 (ENSVPAG00000001979) #25 HNF1B (ENSVPAG00000001980) #27 HEATR6 (ENSVPAG00000001984) #28 Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00940000165089 ENSGT00530000064879.a.a ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT01100000263482.C.c.b.a.a.b ##30 ENSGT00940000165476 Pecora ANCESTRAL SPECIES 1 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00530000064879.a.a.b ENSGT00530000064879.a.a.a ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT01100000263482.C.c.b.a.a.b ##30 ENSGT00940000165476 Percora_a DUPLICATION Percora_a ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751.c #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00530000064879.a.a.b ENSGT00530000064879.a.a.a ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT01100000263482.C.c.b.a.a.b ##30 ENSGT00940000165476 Bovidae ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751.c #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00530000064879.a.a.b ENSGT00530000064879.a.a.a ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT01100000263482.C.c.b.a.a.b ##30 ENSGT00940000165476 Bovinae ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751.c #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00530000064879.a.b ENSGT00530000064879.a.a.b ENSGT00940000166945.f #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT01100000263482.C.c.b.a.a.b ##30 Bos ANCESTRAL SPECIES 1 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00390000018145.xc.e.b ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751.c #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000168945 ENSGT01100000263482.C.c.b.b.a.b.m.b ##30 ENSGT00530000064879.a.a.a ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b.m.a ##30 ENSGT00990000211580 ENSGT01100000263482.C.c.b.b.a.b.n ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 Bos_b ANCESTRAL SPECIES 38 ENSGT00940000165546 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00390000018145.xc.e.b ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751.c #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000168945 ENSGT00530000064879.b ENSGT00530000064879.a.a.b ENSGT00530000064879.a.a.a ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b.n ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b.m.b ##30 Hybrid Bos Indicus MODERN SPECIES 10 ENSBIXG00005004086 #10 ENSBIXG00005023698 CA4 (ENSBIXG00005023689) ZNHIT3 (ENSBIXG00005023671) #11 MYO19 (ENSBIXG00005023637) #12 PIGW (ENSBIXG00005023567) GGNBP2 (ENSBIXG00005023535) #13 DHRS11 (ENSBIXG00005023487) #14 MRM1 (ENSBIXG00005023451) #15 ENSBIXG00005023421 ENSBIXG00005023390 LHX1 (ENSBIXG00005005556) #18 AATF (ENSBIXG00005023328) #19 ACACA (ENSBIXG00005023249) #21 ENSBIXG00005022420 TADA2A (ENSBIXG00005022404) #22 DUSP14 (ENSBIXG00005022366) #23 SYNRG (ENSBIXG00005022316) #24 DDX52 (ENSBIXG00005005546) #25 HNF1B (ENSBIXG00005022168) #27 HEATR6 (ENSBIXG00005003757) #28 ENSBIXG00005022035 ENSBIXG00005022003 ENSBIXG00005021887 ##30 ENSBIXG00005021849 ENSBIXG00005006270 ENSBIXG00005003678 ENSBIXG00005021806 ENSBIXG00005021800 #30 ENSBIXG00005021752 ENSBIXG00005021738 ##30 Cow MODERN SPECIES 10 CHCT1 (ENSBTAG00000018391) #7 ENSBTAG00000034433 USP32 (ENSBTAG00000020089) #10 CA4 (ENSBTAG00000017969) ZNHIT3 (ENSBTAG00000012672) #11 MYO19 (ENSBTAG00000012675) #12 PIGW (ENSBTAG00000034396) GGNBP2 (ENSBTAG00000010290) #13 DHRS11 (ENSBTAG00000010297) #14 MRM1 (ENSBTAG00000010311) #15 ENSBTAG00000000560 LHX1 (ENSBTAG00000033562) #18 AATF (ENSBTAG00000021927) #19 ACACA (ENSBTAG00000017567) #21 C19H17orf78 (ENSBTAG00000025242) TADA2A (ENSBTAG00000014677) #22 DUSP14 (ENSBTAG00000010279) #23 SYNRG (ENSBTAG00000010292) #24 DDX52 (ENSBTAG00000010313) #25 HNF1B (ENSBTAG00000004710) #27 HEATR6 (ENSBTAG00000009635) #28 ENSBTAG00000053991 ENSBTAG00000025258 CCL3 (ENSBTAG00000025250) ##30 ENSBTAG00000025260 WFDC18 (ENSBTAG00000039504) ENSBTAG00000046944 #29 CCL4 (ENSBTAG00000025257) #30 ENSBTAG00000051377 ENSBTAG00000003289 ##30 ENSBTAG00000048626 ##30 Bos_a ANCESTRAL SPECIES ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00390000018145.xc.e.b ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751.c #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00940000168945 ENSGT01100000263482.C.c.b.b.a.b.m.b ##30 ENSGT00530000064879.b ENSGT00530000064879.a.a.b ENSGT00940000166945.f #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b.m.a ##30 Domestic yak MODERN SPECIES 10 ENSBGRG00000017697 #10 CA4 (ENSBGRG00000017567) ZNHIT3 (ENSBGRG00000017493) #11 ENSBGRG00000017214 #12 PIGW (ENSBGRG00000017147) ENSBGRG00000017130 GGNBP2 (ENSBGRG00000016921) #13 DHRS11 (ENSBGRG00000016861) #14 ENSBGRG00000016825 MRM1 (ENSBGRG00000016775) #15 ENSBGRG00000016735 LHX1 (ENSBGRG00000016676) #18 AATF (ENSBGRG00000016579) #19 C17orf78 (ENSBGRG00000016417) ACACA (ENSBGRG00000014792) #21 TADA2A (ENSBGRG00000014519) #22 DUSP14 (ENSBGRG00000014496) #23 SYNRG (ENSBGRG00000013367) #24 DDX52 (ENSBGRG00000013116) #25 HNF1B (ENSBGRG00000012962) #27 HEATR6 (ENSBGRG00000012140) #28 ENSBGRG00000012061 ENSBGRG00000011592 ENSBGRG00000011251 ##30 ENSBGRG00000011198 ENSBGRG00000011179 ENSBGRG00000011113 ENSBGRG00000011019 #29 ENSBGRG00000010946 #30 ENSBGRG00000010840 ##30 ENSBGRG00000024021 ##30 Wild yak MODERN SPECIES 133 ENSBMUG00000005203 #19 ACACA (ENSBMUG00000005405) #21 ENSBMUG00000005480 ENSBMUG00000005505 #22 DUSP14 (ENSBMUG00000005512) #23 SYNRG (ENSBMUG00000005619) #24 DDX52 (ENSBMUG00000005809) #25 HNF1B (ENSBMUG00000005828) #27 HEATR6 (ENSBMUG00000005867) #28 ENSBMUG00000005878 ENSBMUG00000005914 #29 American bison MODERN SPECIES 3331 PPM1D (ENSBBBG00000003012) APPBP2 (ENSBBBG00000002898) CHCT1 (ENSBBBG00000013924) #7 ENSBBBG00000013979 #10 CA4 (ENSBBBG00000013995) ZNHIT3 (ENSBBBG00000003083) #11 ENSBBBG00000014006 #12 PIGW (ENSBBBG00000014009) GGNBP2 (ENSBBBG00000003106) #13 DHRS11 (ENSBBBG00000014031) #14 ENSBBBG00000014039 #15 LHX1 (ENSBBBG00000003130) #18 AATF (ENSBBBG00000003139) #19 ENSBBBG00000003150 ACACA (ENSBBBG00000014359) #21 TADA2A (ENSBBBG00000003311) #22 DUSP14 (ENSBBBG00000003316) #23 SYNRG (ENSBBBG00000014660) #24 DDX52 (ENSBBBG00000014718) #25 HNF1B (ENSBBBG00000003591) #27 HEATR6 (ENSBBBG00000014812) #28 ENSBBBG00000014821 ENSBBBG00000014826 #29 ENSBBBG00000014854 ##30 ENSBBBG00000003664 ENSBBBG00000014865 ENSBBBG00000014876 #29 ENSBBBG00000003679 #30 ENSBBBG00000001231 ##30 ENSBBBG00000001180 ##30 ENSBBBG00000001168 Caprinae ANCESTRAL SPECIES 1 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822.i #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751.c #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00940000166945.e #29 ENSGT01100000263482.C.c.b.b.a.b.l ##30 ENSGT00530000064879.a.a.a ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b.k ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT01100000263482.C.c.b.a.a.b ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Goat MODERN SPECIES 10 ENSCHIG00000017975 APPBP2 (ENSCHIG00000027119) CHCT1 (ENSCHIG00000012925) #7 ENSCHIG00000019250 #10 CA4 (ENSCHIG00000026507) ENSCHIG00000015170 #11 MYO19 (ENSCHIG00000025193) #12 PIGW (ENSCHIG00000013107) GGNBP2 (ENSCHIG00000018194) #13 DHRS11 (ENSCHIG00000014977) #14 MRM1 (ENSCHIG00000008558) #15 LHX1 (ENSCHIG00000022067) #18 AATF (ENSCHIG00000010438) #19 ACACA (ENSCHIG00000014642) #21 C17orf78 (ENSCHIG00000025907) ENSCHIG00000019766 #22 DUSP14 (ENSCHIG00000007892) #23 SYNRG (ENSCHIG00000018157) #24 DDX52 (ENSCHIG00000006275) #25 HNF1B (ENSCHIG00000016007) #27 HEATR6 (ENSCHIG00000020669) #28 ENSCHIG00000026795 ENSCHIG00000017931 ENSCHIG00000014748 ##30 ENSCHIG00000026450 #30 ENSCHIG00000017081 ##30 ENSCHIG00000003747 ##30 ENSCHIG00000021417 ##30 CCL14 (ENSCHIG00000015200) ##30 ENSCHIG00000004359 ENSCHIG00000016688 #34 Rambouillet Sheep MODERN SPECIES 2 APPBP2 (ENSOARG00020010094) CHCT1 (ENSOARG00020009988) #7 ENSOARG00020024981 ENSOARG00020024810 #10 CA4 (ENSOARG00020024778) ZNHIT3 (ENSOARG00020024765) #11 MYO19 (ENSOARG00020024654) #12 PIGW (ENSOARG00020024630) GGNBP2 (ENSOARG00020024497) #13 MRM1 (ENSOARG00020024467) #15 LHX1 (ENSOARG00020024449) #18 ENSOARG00020024441 AATF (ENSOARG00020024358) #19 ENSOARG00020024324 ACACA (ENSOARG00020023744) #21 TADA2A (ENSOARG00020023601) #22 DUSP14 (ENSOARG00020023589) #23 SYNRG (ENSOARG00020022567) #24 DDX52 (ENSOARG00020022421) #25 HNF1B (ENSOARG00020022281) #27 HEATR6 (ENSOARG00020021983) #28 ENSOARG00020021955 #29 ENSOARG00020021939 ENSOARG00020021921 ##30 ENSOARG00020021908 ENSOARG00020021888 ENSOARG00020021814 #30 ENSOARG00020021765 ##30 ENSOARG00020021729 ##30 ENSOARG00020021698 ##30 ENSOARG00020021658 ##30 Siberian musk deer MODERN SPECIES 1135 ENSMMSG00000008344 APPBP2 (ENSMMSG00000008396) CHCT1 (ENSMMSG00000008435) #7 ENSMMSG00000008476 #10 CA4 (ENSMMSG00000008660) ZNHIT3 (ENSMMSG00000008678) #11 MYO19 (ENSMMSG00000008719) #12 PIGW (ENSMMSG00000008870) GGNBP2 (ENSMMSG00000008896) #13 DHRS11 (ENSMMSG00000009003) #14 MRM1 (ENSMMSG00000009048) #15 LHX1 (ENSMMSG00000009094) #18 AATF (ENSMMSG00000009137) #19 ACACA (ENSMMSG00000009380) #21 ENSMMSG00000010857 ENSMMSG00000010886 #22 DUSP14 (ENSMMSG00000010936) #23 SYNRG (ENSMMSG00000011008) #24 DDX52 (ENSMMSG00000011723) #25 HNF1B (ENSMMSG00000011774) #27 HEATR6 (ENSMMSG00000011926) #28 ENSMMSG00000011978 ENSMMSG00000011996 ENSMMSG00000012022 ##30 ENSMMSG00000012069 ENSMMSG00000012084 ENSMMSG00000012107 #30 ENSMMSG00000012133 ##30 ENSMMSG00000012140 ENSMMSG00000012162 ##30 ENSMMSG00000012172 Percora_a ANCESTRAL SPECIES ENSGT00940000156751.d #22 Bovidae ANCESTRAL SPECIES ENSGT00940000156751.d #22 Caprinae ANCESTRAL SPECIES ENSGT00940000156751.d #22 Goat MODERN SPECIES 12 CCDC152 (ENSCHIG00000011450) ENSCHIG00000006291 ENSCHIG00000023711 ENSCHIG00000020006 NIM1K (ENSCHIG00000017425) HMGCS1 (ENSCHIG00000015096) CCL28 (ENSCHIG00000012602) TMEM267 (ENSCHIG00000007411) ENSCHIG00000008597 PAIP1 (ENSCHIG00000011111) NNT (ENSCHIG00000021958) FGF10 (ENSCHIG00000012683) MRPS30 (ENSCHIG00000018591) HCN1 (ENSCHIG00000024729) ENSCHIG00000009285 ENSCHIG00000017939 #22 EMB (ENSCHIG00000012020) PARP8 (ENSCHIG00000017274) ISL1 (ENSCHIG00000022513) PELO (ENSCHIG00000016410) ITGA1 (ENSCHIG00000021216) ITGA2 (ENSCHIG00000026714) MOCS2 (ENSCHIG00000014594) ENSCHIG00000007720 FST (ENSCHIG00000016855) ENSCHIG00000026360 NDUFS4 (ENSCHIG00000025172) ENSCHIG00000027018 HSPB3 (ENSCHIG00000002665) SNX18 (ENSCHIG00000021028) ENSCHIG00000016742 Bovinae ANCESTRAL SPECIES ENSGT00940000156751.d #22 Bos ANCESTRAL SPECIES ENSGT00940000156751.d #22 Bos_a ANCESTRAL SPECIES ENSGT00940000156751.d #22 Wild yak MODERN SPECIES 878 ENSBMUG00000006306 #22 HS3ST1 (ENSBMUG00000006311) Siberian musk deer MODERN SPECIES 67 ENSMMSG00000011090 #22 GAB3 (ENSMMSG00000011112) DKC1 (ENSMMSG00000011162) MPP1 (ENSMMSG00000011258) SMIM9 (ENSMMSG00000011384) F8 (ENSMMSG00000011419) ENSMMSG00000011482 CMC4 (ENSMMSG00000011510) MTCP1 (ENSMMSG00000011532) BRCC3 (ENSMMSG00000011560) VBP1 (ENSMMSG00000011660) RAB39B (ENSMMSG00000011708) ENSMMSG00000011732 CLIC2 (ENSMMSG00000011739) ENSMMSG00000011761 TMLHE (ENSMMSG00000011781) Yarkand deer MODERN SPECIES 28 CHCT1 (ENSCHYG00000001527) #7 ENSCHYG00000001585 #10 ENSCHYG00000001735 CA4 (ENSCHYG00000001762) ZNHIT3 (ENSCHYG00000001790) #11 MYO19 (ENSCHYG00000001839) #12 PIGW (ENSCHYG00000001913) GGNBP2 (ENSCHYG00000001940) #13 DHRS11 (ENSCHYG00000001975) #14 MRM1 (ENSCHYG00000002006) #15 ENSCHYG00000002034 LHX1 (ENSCHYG00000002053) #18 AATF (ENSCHYG00000002084) #19 ACACA (ENSCHYG00000002247) #21 ENSCHYG00000002825 TADA2A (ENSCHYG00000002850) #22 DUSP14 (ENSCHYG00000002888) #23 SYNRG (ENSCHYG00000002942) #24 DDX52 (ENSCHYG00000003090) #25 HNF1B (ENSCHYG00000003125) #27 HEATR6 (ENSCHYG00000003240) #28 ENSCHYG00000003433 ENSCHYG00000003446 ENSCHYG00000003461 ENSCHYG00000003475 ENSCHYG00000003482 ENSCHYG00000003488 ENSCHYG00000003496 ENSCHYG00000003511 #30 ENSCHYG00000003522 ##30 ENSCHYG00000003533 ##30 Cetacea ANCESTRAL SPECIES 5 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00940000165089 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00990000211580 ENSGT01050000245362 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT00940000165476 Odontoceti ANCESTRAL SPECIES 17 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00940000165089 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT00990000211580 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Odontoceti_a ANCESTRAL SPECIES 31 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00940000165089 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Dolphin MODERN SPECIES 319 LHX1 (ENSTTRG00000008900) #18 AATF (ENSTTRG00000008903) #19 ACACA (ENSTTRG00000008906) #21 C17orf78 (ENSTTRG00000008913) TADA2A (ENSTTRG00000008914) #22 DUSP14 (ENSTTRG00000008915) #23 SYNRG (ENSTTRG00000008916) #24 DDX52 (ENSTTRG00000008917) #25 Odontoceti_b ANCESTRAL SPECIES 24 ENSGT00390000006454 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.e #29 ENSGT00940000165089 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Monodontidae ANCESTRAL SPECIES 29 ENSGT00390000006454 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000266523 ENSGT00940000165089 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.a.a.a ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 Narwhal MODERN SPECIES 316 BCAS3 (ENSMMNG00015019434) PPM1D (ENSMMNG00015015991) APPBP2 (ENSMMNG00015016040) CHCT1 (ENSMMNG00015016098) #7 ENSMMNG00015016218 #10 CA4 (ENSMMNG00015016404) ZNHIT3 (ENSMMNG00015016443) #11 MYO19 (ENSMMNG00015016516) #12 PIGW (ENSMMNG00015016591) GGNBP2 (ENSMMNG00015016622) #13 DHRS11 (ENSMMNG00015016705) #14 MRM1 (ENSMMNG00015016757) #15 LHX1 (ENSMMNG00015016784) #18 AATF (ENSMMNG00015016812) #19 ACACA (ENSMMNG00015016998) #21 TADA2A (ENSMMNG00015017412) #22 DUSP14 (ENSMMNG00015017457) #23 SYNRG (ENSMMNG00015017601) #24 DDX52 (ENSMMNG00015018180) #25 ENSMMNG00015018218 HNF1B (ENSMMNG00015018254) #27 HEATR6 (ENSMMNG00015018324) #28 ENSMMNG00015018427 ENSMMNG00015018444 ##30 CCL14 (ENSMMNG00015018458) ##30 CCL16 (ENSMMNG00015018475) ##30 ENSMMNG00015018499 #34 HEATR9 (ENSMMNG00015018520) #35 TAF15 (ENSMMNG00015018630) #36 MMP28 (ENSMMNG00015018658) #37 C17orf50 (ENSMMNG00015018683) Beluga whale MODERN SPECIES 40 BCAS3 (ENSDLEG00000007652) PPM1D (ENSDLEG00000007716) APPBP2 (ENSDLEG00000007720) CHCT1 (ENSDLEG00000007728) #7 USP32 (ENSDLEG00000007736) #10 CA4 (ENSDLEG00000007765) ZNHIT3 (ENSDLEG00000007773) #11 MYO19 (ENSDLEG00000007793) #12 PIGW (ENSDLEG00000007810) GGNBP2 (ENSDLEG00000013225) #13 DHRS11 (ENSDLEG00000013252) #14 MRM1 (ENSDLEG00000013261) #15 LHX1 (ENSDLEG00000013274) #18 AATF (ENSDLEG00000013289) #19 ACACA (ENSDLEG00000013923) #21 TADA2A (ENSDLEG00000020246) #22 DUSP14 (ENSDLEG00000020275) #23 SYNRG (ENSDLEG00000020290) #24 DDX52 (ENSDLEG00000020331) #25 HNF1B (ENSDLEG00000020341) #27 HEATR6 (ENSDLEG00000020345) #28 ENSDLEG00000020350 ENSDLEG00000020353 ENSDLEG00000020355 #30 ENSDLEG00000020357 ##30 ENSDLEG00000020360 ##30 ENSDLEG00000020361 ENSDLEG00000020363 CCL14 (ENSDLEG00000020366) ##30 CCL16 (ENSDLEG00000020370) ##30 CCL5 (ENSDLEG00000020374) #34 Vaquita MODERN SPECIES 12 BCAS3 (ENSPSNG00000016097) PPM1D (ENSPSNG00000016346) APPBP2 (ENSPSNG00000016424) CHCT1 (ENSPSNG00000016555) #7 ENSPSNG00000016659 #10 CA4 (ENSPSNG00000016964) MYO19 (ENSPSNG00000017087) #12 PIGW (ENSPSNG00000017216) GGNBP2 (ENSPSNG00000017255) #13 DHRS11 (ENSPSNG00000017327) #14 MRM1 (ENSPSNG00000017377) #15 LHX1 (ENSPSNG00000017410) #18 AATF (ENSPSNG00000017487) #19 ACACA (ENSPSNG00000017621) #21 ENSPSNG00000018226 TADA2A (ENSPSNG00000018448) #22 DUSP14 (ENSPSNG00000018531) #23 SYNRG (ENSPSNG00000018625) #24 DDX52 (ENSPSNG00000019073) #25 HNF1B (ENSPSNG00000019157) #27 HEATR6 (ENSPSNG00000019450) #28 ENSPSNG00000019574 ENSPSNG00000019594 #29 ENSPSNG00000019631 ENSPSNG00000019708 ##30 ENSPSNG00000019744 ##30 CCL14 (ENSPSNG00000019802) ##30 ENSPSNG00000019836 ENSPSNG00000019862 #34 HEATR9 (ENSPSNG00000019966) #35 TAF15 (ENSPSNG00000020196) #36 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 5 BRIP1 (ENSPCTG00005020116) TBX4 (ENSPCTG00005020037) TBX2 (ENSPCTG00005019984) BCAS3 (ENSPCTG00005019802) ENSPCTG00005019742 CA4 (ENSPCTG00005019708) USP32 (ENSPCTG00005019411) #10 APPBP2 (ENSPCTG00005019348) ENSPCTG00005019258 #12 PIGW (ENSPCTG00005019246) GGNBP2 (ENSPCTG00005019147) #13 ENSPCTG00005019090 LHX1 (ENSPCTG00005019040) #18 AATF (ENSPCTG00005018907) #19 ACACA (ENSPCTG00005017872) #21 TADA2A (ENSPCTG00005017565) #22 DUSP14 (ENSPCTG00005017530) #23 SYNRG (ENSPCTG00005016890) #24 DDX52 (ENSPCTG00005016726) #25 HNF1B (ENSPCTG00005016388) #27 HEATR6 (ENSPCTG00005016144) #28 ENSPCTG00005016103 ENSPCTG00005016070 #29 ENSPCTG00005015862 ENSPCTG00005015800 ##30 ENSPCTG00005015628 ##30 ENSPCTG00005015545 CCL14 (ENSPCTG00005015445) ##30 CCL16 (ENSPCTG00005015413) ##30 CCL5 (ENSPCTG00005015361) #34 HEATR9 (ENSPCTG00005014946) #35 Sperm whale MODERN SPECIES 1 MYCT1 (ENSPCTG00005005562) ENSPCTG00005005623 ENSPCTG00005005713 SYNE1 (ENSPCTG00005005794) ESR1 (ENSPCTG00005005962) ENSPCTG00005006030 CCDC170 (ENSPCTG00005006069) ARMT1 (ENSPCTG00005006118) RMND1 (ENSPCTG00005006136) ZBTB2 (ENSPCTG00005006183) AKAP12 (ENSPCTG00005006212) MTHFD1L (ENSPCTG00005006289) PLEKHG1 (ENSPCTG00005006762) IYD (ENSPCTG00005006834) PPP1R14C (ENSPCTG00005006973) ENSPCTG00005006995 #22 ENSPCTG00005007010 PCMT1 (ENSPCTG00005007055) NUP43 (ENSPCTG00005007117) ENSPCTG00005007144 LATS1 (ENSPCTG00005007155) ENSPCTG00005000533 GINM1 (ENSPCTG00005000594) PPIL4 (ENSPCTG00005000625) ENSPCTG00005000658 TAB2 (ENSPCTG00005000695) UST (ENSPCTG00005000730) SASH1 (ENSPCTG00005000760) ENSPCTG00005000835 ENSPCTG00005000838 ENSPCTG00005000849 Blue whale MODERN SPECIES 12 BCAS3 (ENSBMSG00010020266) ENSBMSG00010020390 PPM1D (ENSBMSG00010020421) APPBP2 (ENSBMSG00010020445) CHCT1 (ENSBMSG00010020482) #7 ENSBMSG00010020532 #10 CA4 (ENSBMSG00010020631) MYO19 (ENSBMSG00010021000) #12 PIGW (ENSBMSG00010021029) GGNBP2 (ENSBMSG00010021056) #13 DHRS11 (ENSBMSG00010021095) #14 MRM1 (ENSBMSG00010021111) #15 LHX1 (ENSBMSG00010021123) #18 AATF (ENSBMSG00010021134) #19 ACACA (ENSBMSG00010021201) #21 TADA2A (ENSBMSG00010021299) #22 DUSP14 (ENSBMSG00010021311) #23 SYNRG (ENSBMSG00010021406) #24 DDX52 (ENSBMSG00010021550) #25 HNF1B (ENSBMSG00010021568) #27 HEATR6 (ENSBMSG00010021585) #28 ENSBMSG00010021591 ENSBMSG00010021600 ENSBMSG00010021603 ENSBMSG00010021612 ENSBMSG00010021619 ##30 ENSBMSG00010021620 ENSBMSG00010021624 ##30 ENSBMSG00010021627 CCL14 (ENSBMSG00010021633) ##30 CCL16 (ENSBMSG00010021638) ##30 Laurasiatheria_b ANCESTRAL SPECIES 4 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Carnivora ANCESTRAL SPECIES 9 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Caniformia ANCESTRAL SPECIES 6 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Caniformia_b ANCESTRAL SPECIES 21 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Ursidae ANCESTRAL SPECIES 18 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT00940000165089 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Ursus ANCESTRAL SPECIES 8 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00940000167417.b ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00950000185053 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT00940000161793.y.b ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.D #34 American black bear MODERN SPECIES 2106 ENSUAMG00000008205 #21 C17orf78 (ENSUAMG00000008164) TADA2A (ENSUAMG00000008161) #22 Polar bear MODERN SPECIES 192 APPBP2 (ENSUMAG00000022254) CHCT1 (ENSUMAG00000022249) #7 ENSUMAG00000022236 #10 CA4 (ENSUMAG00000022226) ENSUMAG00000022224 ENSUMAG00000022218 #12 ENSUMAG00000022216 #12 PIGW (ENSUMAG00000022215) GGNBP2 (ENSUMAG00000022208) #13 DHRS11 (ENSUMAG00000022192) #14 ENSUMAG00000022189 #15 LHX1 (ENSUMAG00000022184) #18 AATF (ENSUMAG00000022175) #19 ACACA (ENSUMAG00000018151) #21 C17orf78 (ENSUMAG00000017080) TADA2A (ENSUMAG00000016984) #22 DUSP14 (ENSUMAG00000016977) #23 SYNRG (ENSUMAG00000016970) #24 ENSUMAG00000016958 HNF1B (ENSUMAG00000016950) #27 ENSUMAG00000016946 #28 ENSUMAG00000016943 #28 ENSUMAG00000016939 ENSUMAG00000016935 ENSUMAG00000016931 ##30 ENSUMAG00000016930 ##30 ENSUMAG00000016926 ##30 ENSUMAG00000016920 ##30 ENSUMAG00000016915 ENSUMAG00000016911 ENSUMAG00000016907 #30 Giant Panda MODERN SPECIES 4 PPM1D (ENSAMEG00000008112) APPBP2 (ENSAMEG00000008127) CHCT1 (ENSAMEG00000008166) #7 ENSAMEG00000008169 #10 ENSAMEG00000008196 ENSAMEG00000024684 ENSAMEG00000008200 #11 GGNBP2 (ENSAMEG00000008237) #13 ENSAMEG00000008277 #14 MRM1 (ENSAMEG00000008301) #15 LHX1 (ENSAMEG00000008305) #18 AATF (ENSAMEG00000013539) #19 ENSAMEG00000024531 ENSAMEG00000013272 ACACA (ENSAMEG00000013274) #21 TADA2A (ENSAMEG00000013242) #22 DUSP14 (ENSAMEG00000018774) #23 SYNRG (ENSAMEG00000013209) #24 DDX52 (ENSAMEG00000013159) #25 ENSAMEG00000013125 #27 ENSAMEG00000013116 #28 ENSAMEG00000028046 ENSAMEG00000011328 ENSAMEG00000023646 ##30 ENSAMEG00000011334 ##30 ENSAMEG00000030600 ##30 ENSAMEG00000029251 ##30 ENSAMEG00000027516 ##30 ENSAMEG00000014904 ##30 CCL5 (ENSAMEG00000029436) #34 ENSAMEG00000014896 #35 Mustelinae ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Ferret MODERN SPECIES 181 BCAS3 (ENSMPUG00000015112) PPM1D (ENSMPUG00000015109) APPBP2 (ENSMPUG00000015105) CHCT1 (ENSMPUG00000015101) #7 ENSMPUG00000015097 #10 CA4 (ENSMPUG00000015096) ZNHIT3 (ENSMPUG00000015094) #11 MYO19 (ENSMPUG00000015088) #12 GGNBP2 (ENSMPUG00000015085) #13 DHRS11 (ENSMPUG00000015068) #14 MRM1 (ENSMPUG00000015063) #15 LHX1 (ENSMPUG00000015060) #18 AATF (ENSMPUG00000015057) #19 C17orf78 (ENSMPUG00000015051) ACACA (ENSMPUG00000015043) #21 TADA2A (ENSMPUG00000015040) #22 DUSP14 (ENSMPUG00000019626) #23 SYNRG (ENSMPUG00000015033) #24 DDX52 (ENSMPUG00000015007) #25 HNF1B (ENSMPUG00000015004) #27 HEATR6 (ENSMPUG00000015001) #28 ENSMPUG00000014998 ENSMPUG00000014996 ENSMPUG00000014994 #30 ENSMPUG00000014985 ##30 ENSMPUG00000014983 ##30 ENSMPUG00000014979 ##30 ENSMPUG00000014967 ##30 ENSMPUG00000014978 ##30 ENSMPUG00000014962 #34 HEATR9 (ENSMPUG00000014952) #35 American mink MODERN SPECIES 37 ENSNVIG00000001066 APBP2 (ENSNVIG00000001010) CHCT1 (ENSNVIG00000000985) #7 ENSNVIG00000000918 #10 CA4 (ENSNVIG00000000902) ZNHIT3 (ENSNVIG00000000885) #11 MYO19 (ENSNVIG00000000700) #12 PIGW (ENSNVIG00000000686) GGNBP2 (ENSNVIG00000000668) #13 DHRS11 (ENSNVIG00000000659) #14 MRM1 (ENSNVIG00000000652) #15 LHX1 (ENSNVIG00000000638) #18 AATF (ENSNVIG00000000583) #19 ENSNVIG00000000568 ACACA (ENSNVIG00000000163) #21 TADA2A (ENSNVIG00000000094) #22 DUS14 (ENSNVIG00000020837) #23 SYNRG (ENSNVIG00000020683) #24 DDX52 (ENSNVIG00000020638) #25 HNF1B (ENSNVIG00000020611) #27 HEATR6 (ENSNVIG00000020553) #28 ENSNVIG00000020548 ENSNVIG00000020540 CCL4 (ENSNVIG00000020522) #30 CL3L1 (ENSNVIG00000020511) ##30 ENSNVIG00000020505 ##30 ENSNVIG00000020490 ##30 CCL14 (ENSNVIG00000020482) ##30 CCL16 (ENSNVIG00000020466) ##30 CCL5 (ENSNVIG00000020449) #34 HEATR9 (ENSNVIG00000020408) #35 Canidae ANCESTRAL SPECIES 2 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 ENSGT00520000060616 ENSGT00960000187851 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 Canis_lupus ANCESTRAL SPECIES 3 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 ENSGT00520000060616 ENSGT00960000187851 ENSGT00940000165089 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 Dingo MODERN SPECIES 150 ENSCAFG00020002319 CA4 (ENSCAFG00020002325) ENSCAFG00020002335 ENSCAFG00020002337 #11 ENSCAFG00020002343 #12 ENSCAFG00020002353 #12 PIGW (ENSCAFG00020002356) GGNBP2 (ENSCAFG00020002358) #13 DHRS11 (ENSCAFG00020002365) #14 MRM1 (ENSCAFG00020002377) #15 LHX1 (ENSCAFG00020002382) #18 AATF (ENSCAFG00020002400) #19 ACACA (ENSCAFG00020002428) #21 ENSCAFG00020002683 C17orf78 (ENSCAFG00020002689) TADA2A (ENSCAFG00020002696) #22 ENSCAFG00020002707 #23 ENSCAFG00020002774 #24 DDX52 (ENSCAFG00020003753) #25 ENSCAFG00020003766 HNF1B (ENSCAFG00020003775) #27 HEATR6 (ENSCAFG00020003782) #28 ENSCAFG00020003906 ENSCAFG00020003940 ENSCAFG00020003943 ENSCAFG00020003948 #30 ENSCAFG00020003951 ##30 ENSCAFG00020003957 ##30 ENSCAFG00020003978 ##30 ENSCAFG00020003980 #34 HEATR9 (ENSCAFG00020003982) #35 Dog MODERN SPECIES 37 APPBP2 (ENSCAFG00845028094) CHCT1 (ENSCAFG00845028175) #7 ENSCAFG00845028214 #10 ENSCAFG00845028323 CA4 (ENSCAFG00845028365) MYO19 (ENSCAFG00845028534) #12 ZNHIT3 (ENSCAFG00845028804) #11 PIGW (ENSCAFG00845028850) GGNBP2 (ENSCAFG00845028948) #13 DHRS11 (ENSCAFG00845028995) #14 MRM1 (ENSCAFG00845029022) #15 LHX1 (ENSCAFG00845029047) #18 AATF (ENSCAFG00845006720) #19 ACACA (ENSCAFG00845007007) #21 ENSCAFG00845007596 TADA2A (ENSCAFG00845007638) #22 DUSP14 (ENSCAFG00845007702) #23 SYNRG (ENSCAFG00845007803) #24 DDX52 (ENSCAFG00845007997) #25 HNF1B (ENSCAFG00845008106) #27 HEATR6 (ENSCAFG00845008391) #28 ENSCAFG00845008744 ENSCAFG00845008789 CCL4 (ENSCAFG00845008857) CCL3 (ENSCAFG00845008966) ##30 ENSCAFG00845008998 ##30 CCL23 (ENSCAFG00845009019) ##30 ENSCAFG00845009033 ##30 ENSCAFG00845009059 ##30 CCL5 (ENSCAFG00845009083) #34 HEATR9 (ENSCAFG00845009131) #35 Red fox MODERN SPECIES 20 ENSVVUG00000018292 CUNH17orf64 (ENSVVUG00000018306) #7 USP32 (ENSVVUG00000018316) #10 CA4 (ENSVVUG00000018348) ZNHIT3 (ENSVVUG00000018353) #11 MYO19 (ENSVVUG00000018371) #12 PIGW (ENSVVUG00000018383) GGNBP2 (ENSVVUG00000018391) #13 DHRS11 (ENSVVUG00000018406) #14 MRM1 (ENSVVUG00000018420) #15 LHX1 (ENSVVUG00000018427) #18 AATF (ENSVVUG00000018432) #19 ENSVVUG00000018474 #21 ENSVVUG00000018853 #21 C17orf78 (ENSVVUG00000019355) TADA2A (ENSVVUG00000019409) #22 DUSP14 (ENSVVUG00000019741) #23 SYNRG (ENSVVUG00000019777) #24 DDX52 (ENSVVUG00000020209) #25 HNF1B (ENSVVUG00000020331) #27 HEATR6 (ENSVVUG00000020336) #28 ENSVVUG00000020348 ENSVVUG00000020351 ENSVVUG00000020353 #30 ENSVVUG00000020356 ENSVVUG00000020359 ##30 ENSVVUG00000020361 ##30 ENSVVUG00000020362 ##30 ENSVVUG00000020363 ##30 CCL14 (ENSVVUG00000020364) ##30 ENSVVUG00000020365 ##30 Felidae ANCESTRAL SPECIES 8 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 Panthera ANCESTRAL SPECIES 14 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 Panthera_a ANCESTRAL SPECIES 13 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT01100000264525 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 ENSGT00390000007247 #35 leopard MODERN SPECIES 96 ENSPPRG00000014943 MYO19 (ENSPPRG00000018251) #12 PIGW (ENSPPRG00000014987) GGNBP2 (ENSPPRG00000021613) #13 DHRS11 (ENSPPRG00000023759) #14 MRM1 (ENSPPRG00000023620) #15 LHX1 (ENSPPRG00000023595) #18 AATF (ENSPPRG00000023361) #19 C17orf78 (ENSPPRG00000023060) ACACA (ENSPPRG00000002505) #21 TADA2A (ENSPPRG00000003823) #22 DUSP14 (ENSPPRG00000015254) #23 SYNRG (ENSPPRG00000008504) #24 DDX52 (ENSPPRG00000009742) #25 HNF1B (ENSPPRG00000012674) #27 HEATR6 (ENSPPRG00000016046) #28 ENSPPRG00000017586 ENSPPRG00000019368 #30 ENSPPRG00000020856 ##30 ENSPPRG00000022503 ##30 CCL14 (ENSPPRG00000023216) ##30 CCL16 (ENSPPRG00000023127) ##30 ENSPPRG00000022842 #34 HEATR9 (ENSPPRG00000001679) #35 TAF15 (ENSPPRG00000003286) #36 MMP28 (ENSPPRG00000004296) #37 lion MODERN SPECIES 14 PPM1D (ENSPLOG00000007226) APPBP2 (ENSPLOG00000007194) CHCT1 (ENSPLOG00000007160) #7 ENSPLOG00000007077 #10 CA4 (ENSPLOG00000007037) ENSPLOG00000007024 #11 ENSPLOG00000006995 MYO19 (ENSPLOG00000006719) #12 PIGW (ENSPLOG00000006639) GGNBP2 (ENSPLOG00000006608) #13 ENSPLOG00000006593 MRM1 (ENSPLOG00000006571) #15 LHX1 (ENSPLOG00000006538) #18 AATF (ENSPLOG00000006520) #19 ACACA (ENSPLOG00000006179) #21 ENSPLOG00000006020 #22 ENSPLOG00000005630 EFCAB3 (ENSPLOG00000020048) ENSPLOG00000019959 TLK2 (ENSPLOG00000019839) MRC2 (ENSPLOG00000019503) MARCHF10 (ENSPLOG00000019289) TANC2 (ENSPLOG00000019138) CYB561 (ENSPLOG00000019068) ACE (ENSPLOG00000018350) ENSPLOG00000018155 KCNH6 (ENSPLOG00000017736) DCAF7 (ENSPLOG00000017639) TACO1 (ENSPLOG00000017594) MAP3K3 (ENSPLOG00000017230) LIMD2 (ENSPLOG00000017132) Tiger MODERN SPECIES 518 ENSPTIG00000007741 #11 MYO19 (ENSPTIG00000008098) #12 PIGW (ENSPTIG00000009658) GGNBP2 (ENSPTIG00000008986) #13 DHRS11 (ENSPTIG00000009428) #14 MRM1 (ENSPTIG00000009829) #15 LHX1 (ENSPTIG00000010052) #18 AATF (ENSPTIG00000010436) #19 ACACA (ENSPTIG00000010850) #21 C17orf78 (ENSPTIG00000011549) TADA2A (ENSPTIG00000011888) #22 DUSP14 (ENSPTIG00000009715) #23 SYNRG (ENSPTIG00000012241) #24 DDX52 (ENSPTIG00000013697) #25 HNF1B (ENSPTIG00000014140) #27 HEATR6 (ENSPTIG00000014733) #28 ENSPTIG00000015144 ENSPTIG00000015300 #30 ENSPTIG00000015557 ##30 ENSPTIG00000015585 ##30 CCL14 (ENSPTIG00000015670) ##30 CCL16 (ENSPTIG00000015804) ##30 ENSPTIG00000015882 #34 HEATR9 (ENSPTIG00000016190) #35 TAF15 (ENSPTIG00000016445) #36 MMP28 (ENSPTIG00000016715) #37 Cat MODERN SPECIES 245 APPBP2 (ENSFCAG00000023791) CHCT1 (ENSFCAG00000039169) #7 USP32 (ENSFCAG00000027422) #10 CA4 (ENSFCAG00000009073) ZNHIT3 (ENSFCAG00000028458) #11 ENSFCAG00000046508 ENSFCAG00000041062 MYO19 (ENSFCAG00000011616) #12 PIGW (ENSFCAG00000026395) GGNBP2 (ENSFCAG00000007032) #13 DHRS11 (ENSFCAG00000007033) #14 MRM1 (ENSFCAG00000031667) #15 LHX1 (ENSFCAG00000033399) #18 AATF (ENSFCAG00000042641) #19 ACACA (ENSFCAG00000010568) #21 TADA2A (ENSFCAG00000023503) #22 DUSP14 (ENSFCAG00000010571) #23 SYNRG (ENSFCAG00000010572) #24 DDX52 (ENSFCAG00000010573) #25 HNF1B (ENSFCAG00000000241) #27 HEATR6 (ENSFCAG00000031125) #28 ENSFCAG00000038925 ENSFCAG00000053621 ENSFCAG00000039402 #30 ENSFCAG00000033951 ##30 ENSFCAG00000032130 ##30 ENSFCAG00000047484 ##30 ENSFCAG00000025629 CCL14 (ENSFCAG00000018482) ##30 CCL16 (ENSFCAG00000010005) ##30 CCL5 (ENSFCAG00000001259) #34 Laurasiatheria_c ANCESTRAL SPECIES 3 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945 #29 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01050000245362 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a ##30 Chiroptera ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Microchiroptera ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.B ##30 ENSGT01100000263482.D #34 Greater horseshoe bat MODERN SPECIES 13 PPM1D (ENSRFEG00010008764) APPBP2 (ENSRFEG00010008699) CHCT1 (ENSRFEG00010008642) #7 ENSRFEG00010008269 #10 CA4 (ENSRFEG00010008180) ZNHIT3 (ENSRFEG00010008147) #11 MYO19 (ENSRFEG00010008050) #12 PIGW (ENSRFEG00010008022) GGNBP2 (ENSRFEG00010007942) #13 DHRS11 (ENSRFEG00010007868) #14 MRM1 (ENSRFEG00010007798) #15 LHX1 (ENSRFEG00010007777) #18 AATF (ENSRFEG00010007726) #19 C17orf78 (ENSRFEG00010007671) ACACA (ENSRFEG00010006784) #21 TADA2A (ENSRFEG00010006399) #22 DUSP14 (ENSRFEG00010006354) #23 SYNRG (ENSRFEG00010006146) #24 DDX52 (ENSRFEG00010005922) #25 HNF1B (ENSRFEG00010005862) #27 HEATR6 (ENSRFEG00010005729) #28 ENSRFEG00010005677 ENSRFEG00010005650 #30 ENSRFEG00010005610 #30 ENSRFEG00010005514 #30 ENSRFEG00010005494 ##30 ENSRFEG00010005457 ENSRFEG00010005430 ##30 ENSRFEG00010005380 ENSRFEG00010021181 ##30 CCL14 (ENSRFEG00010021174) ##30 Microbat MODERN SPECIES 1457 TADA2A (ENSMLUG00000014798) #22 DUSP14 (ENSMLUG00000014803) #23 SYNRG (ENSMLUG00000014805) #24 ENSMLUG00000007167 #25 HNF1B (ENSMLUG00000012260) #27 ENSMLUG00000002899 #30 ENSMLUG00000013583 ENSMLUG00000028878 ##30 ENSMLUG00000009413 ##30 Megabat MODERN SPECIES 3936 TADA2A (ENSPVAG00000010453) #22 DUSP14 (ENSPVAG00000010455) #23 SYNRG (ENSPVAG00000010456) #24 DDX52 (ENSPVAG00000010462) #25 HNF1B (ENSPVAG00000010466) #27 Equus ANCESTRAL SPECIES ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00940000166945.c.a #29 ENSGT00940000168945 ENSGT00940000166945.d #29 ENSGT01100000263482.C.c.a #30 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01050000245362 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.b ##30 Horse MODERN SPECIES 2 APPBP2 (ENSECAG00000016822) CHCT1 (ENSECAG00000050359) #7 ENSECAG00000046356 USP32 (ENSECAG00000018702) #10 CA4 (ENSECAG00000022739) ZNHIT3 (ENSECAG00000023232) #11 MYO19 (ENSECAG00000023440) #12 PIGW (ENSECAG00000003755) GGNBP2 (ENSECAG00000024653) #13 DHRS11 (ENSECAG00000025095) #14 MRM1 (ENSECAG00000025139) #15 LHX1 (ENSECAG00000001597) #18 AATF (ENSECAG00000008531) #19 ACACA (ENSECAG00000010631) #21 ENSECAG00000040753 TADA2A (ENSECAG00000025118) #22 DUSP14 (ENSECAG00000003831) #23 SYNRG (ENSECAG00000008489) #24 DDX52 (ENSECAG00000012286) #25 HNF1B (ENSECAG00000015854) #27 HEATR6 (ENSECAG00000018925) #28 ENSECAG00000039383 ENSECAG00000022988 #29 ENSECAG00000029928 ENSECAG00000056927 ENSECAG00000037915 #29 ENSECAG00000022992 #30 ENSECAG00000024640 ##30 ENSECAG00000024790 ##30 ENSECAG00000024886 ##30 ENSECAG00000024882 Donkey MODERN SPECIES 4 BCAS3 (ENSEASG00005002183) PPM1D (ENSEASG00005002175) APPBP2 (ENSEASG00005002171) CHCT1 (ENSEASG00005002167) #7 ENSEASG00005002159 #10 ENSEASG00005002153 ENSEASG00005002142 #12 PIGW (ENSEASG00005002139) GGNBP2 (ENSEASG00005002133) #13 DHRS11 (ENSEASG00005032743) #14 MRM1 (ENSEASG00005030862) #15 LHX1 (ENSEASG00005002117) #18 AATF (ENSEASG00005002109) #19 ENSEASG00005037123 ACACA (ENSEASG00005000212) #21 TADA2A (ENSEASG00005000173) #22 DUSP14 (ENSEASG00005032483) #23 SYNRG (ENSEASG00005011280) #24 DDX52 (ENSEASG00005011275) #25 ENSEASG00005011268 #27 ENSEASG00005011267 #28 ENSEASG00005030297 ENSEASG00005038388 ENSEASG00005011265 #29 ENSEASG00005011263 ENSEASG00005025051 ENSEASG00005011261 #29 ENSEASG00005011262 #29 ENSEASG00005011259 ENSEASG00005011258 ENSEASG00005011256 Eulipotyphla ANCESTRAL SPECIES 220 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 Common shrew MODERN SPECIES 675 TADA2A (ENSSARG00000010850) #22 DUSP14 (ENSSARG00000010863) #23 SYNRG (ENSSARG00000010867) #24 Hedgehog MODERN SPECIES 2888 ACACA (ENSEEUG00000001427) #21 TADA2A (ENSEEUG00000001547) #22 Atlantogenata ANCESTRAL SPECIES 1 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a.d #30 ENSGT01100000263482.C.c.b.b.b #31 ENSGT01100000263482.C.c.a.c #30 ENSGT01100000263482.C.c.b.b.a.b ##30 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT01100000263482.D #34 Xenarthra ANCESTRAL SPECIES 963 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675 #23 Sloth DUPLICATION Sloth MODERN SPECIES 875 ENSCHOG00000003460 #22 Sloth MODERN SPECIES 10557 ENSCHOG00000012286 #22 Armadillo MODERN SPECIES 3529 LHX1 (ENSDNOG00000036189) #18 AATF (ENSDNOG00000011100) #19 ACACA (ENSDNOG00000011118) #21 TADA2A (ENSDNOG00000025422) #22 DUSP14 (ENSDNOG00000000589) #23 Afrotheria ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT00530000064879 ENSGT01100000263482.C.c.a.d #30 ENSGT01100000263482.C.c.b.b.b #31 ENSGT01100000263482.C.c.a.c #30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT00940000168309 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Afrotheria_a ANCESTRAL SPECIES 2 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00520000060616 ENSGT01100000263482.C.c.a.d #30 ENSGT00530000064879 ENSGT01100000263482.C.c.b.b.b #31 ENSGT01100000263482.C.c.a.c #30 ENSGT01100000263482.C.c.b.a.b.a ##30 ENSGT01100000263482.C.c.b.a.b.b ##30 ENSGT00940000168309 ENSGT00390000007247 #35 ENSGT00940000156438 #36 Elephant MODERN SPECIES 310 PPM1D (ENSLAFG00000006586) APPBP2 (ENSLAFG00000017099) CHCT1 (ENSLAFG00000026714) #7 ENSLAFG00000007676 #10 CA4 (ENSLAFG00000007673) ENSLAFG00000009532 #11 MYO19 (ENSLAFG00000009537) #12 PIGW (ENSLAFG00000009545) GGNBP2 (ENSLAFG00000009547) #13 DHRS11 (ENSLAFG00000012574) #14 MRM1 (ENSLAFG00000012584) #15 LHX1 (ENSLAFG00000006400) #18 AATF (ENSLAFG00000006402) #19 ACACA (ENSLAFG00000002621) #21 C17orf78 (ENSLAFG00000002627) TADA2A (ENSLAFG00000030107) #22 DUSP14 (ENSLAFG00000002632) #23 SYNRG (ENSLAFG00000002633) #24 DDX52 (ENSLAFG00000002635) #25 HNF1B (ENSLAFG00000002573) #27 HEATR6 (ENSLAFG00000016303) #28 ENSLAFG00000032152 ENSLAFG00000026430 ENSLAFG00000026952 ENSLAFG00000030741 ENSLAFG00000014470 #30 ENSLAFG00000011865 #30 ENSLAFG00000008591 ##30 CCL14 (ENSLAFG00000020887) ##30 ENSLAFG00000011380 #31 HEATR9 (ENSLAFG00000025920) #35 Hyrax MODERN SPECIES 817 TADA2A (ENSPCAG00000005416) #22 DUSP14 (ENSPCAG00000005563) #23 SYNRG (ENSPCAG00000005580) #24 DDX52 (ENSPCAG00000005814) #25 Tenrec MODERN SPECIES 1085 TADA2A (ENSETEG00000001870) #22 Marsupialia ANCESTRAL SPECIES 3 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00730000111580 ENSGT00730000113352 ENSGT00910000144329 ENSGT00910000144375 ENSGT00940000161896 ENSGT00940000161986 ENSGT00940000161276.C ENSGT00940000161959 ENSGT00940000163114 ENSGT00390000000920 ENSGT00940000161706 ENSGT00940000161854 Marsupialia_b ANCESTRAL SPECIES 26 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00730000111580 ENSGT00730000111554 ENSGT00940000165746 ENSGT00940000163248 Diprotodontia ANCESTRAL SPECIES 33 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT01100000264066 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00730000111580 ENSGT00730000111554 ENSGT00940000165746 ENSGT00940000163248 Diprotodontia_a ANCESTRAL SPECIES 32 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT01100000264066 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000008122 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00730000111580 ENSGT00730000111554 ENSGT00940000165746 ENSGT00940000163019 ENSGT01020000233790 koala MODERN SPECIES 42 PPM1D (ENSPCIG00000013179) APPBP2 (ENSPCIG00000013180) CHCT1 (ENSPCIG00000013181) #7 ENSPCIG00000013182 #10 ENSPCIG00000013189 ENSPCIG00000013190 MYO19 (ENSPCIG00000013191) #12 PIGW (ENSPCIG00000013192) GGNBP2 (ENSPCIG00000003380) #13 DHRS11 (ENSPCIG00000003355) #14 MRM1 (ENSPCIG00000003352) #15 LHX1 (ENSPCIG00000017762) #18 AATF (ENSPCIG00000017761) #19 ACACA (ENSPCIG00000017759) #21 ENSPCIG00000017758 TADA2A (ENSPCIG00000017755) #22 DUSP14 (ENSPCIG00000017751) #23 SYNRG (ENSPCIG00000017742) #24 DDX52 (ENSPCIG00000017730) #25 C1orf68 (ENSPCIG00000017726) ENSPCIG00000032460 ENSPCIG00000017715 ENSPCIG00000017712 ENSPCIG00000017709 ENSPCIG00000017707 ENSPCIG00000017705 ENSPCIG00000017702 ENSPCIG00000030613 ENSPCIG00000013321 ENSPCIG00000034958 ENSPCIG00000037207 Common wonbat MODERN SPECIES 1034 BCAS3 (ENSVURG00010012189) PPM1D (ENSVURG00010012176) APPBP2 (ENSVURG00010012164) CHCT1 (ENSVURG00010012156) #7 ENSVURG00010012139 #10 ENSVURG00010012134 ENSVURG00010012125 MYO19 (ENSVURG00010012080) #12 GGNBP2 (ENSVURG00010012038) #13 DHRS11 (ENSVURG00010012020) #14 MRM1 (ENSVURG00010012010) #15 LHX1 (ENSVURG00010012004) #18 AATF (ENSVURG00010011984) #19 ACACA (ENSVURG00010011868) #21 ENSVURG00010011837 TADA2A (ENSVURG00010011819) #22 DUSP14 (ENSVURG00010011810) #23 SYNRG (ENSVURG00010011652) #24 DDX52 (ENSVURG00010011621) #25 C1orf68 (ENSVURG00010011614) ENSVURG00010011609 ENSVURG00010011596 ENSVURG00010011589 ENSVURG00010011585 ENSVURG00010011580 ENSVURG00010011576 Wallaby MODERN SPECIES 1745 TADA2A (ENSMEUG00000001911) #22 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000025025 ENSSHAG00000004858 APPBP2 (ENSSHAG00000001280) CHCT1 (ENSSHAG00000005516) #7 ENSSHAG00000020615 ENSSHAG00000025956 #10 ENSSHAG00000031683 ENSSHAG00000027741 #11 ENSSHAG00000029321 ENSSHAG00000004251 #12 GGNBP2 (ENSSHAG00000005124) #13 MRM1 (ENSSHAG00000030236) #15 LHX1 (ENSSHAG00000010404) #18 AATF (ENSSHAG00000010497) #19 ACACA (ENSSHAG00000022505) #21 TADA2A (ENSSHAG00000012961) #22 DUSP14 (ENSSHAG00000021060) #23 SYNRG (ENSSHAG00000013596) #24 ENSSHAG00000013962 #25 ENSSHAG00000001840 ENSSHAG00000001915 ENSSHAG00000025687 ENSSHAG00000022949 ENSSHAG00000030348 ENSSHAG00000002266 ENSSHAG00000000690 ENSSHAG00000026431 ENSSHAG00000031521 ENSSHAG00000029238 ENSSHAG00000004322 ENSSHAG00000031942 Opossum MODERN SPECIES 1 ENSMODG00000038141 LUC7L3 (ENSMODG00000012711) ANKRD40 (ENSMODG00000012727) ENSMODG00000012730 ENSMODG00000003392 ZNHIT3 (ENSMODG00000003379) #11 MYO19 (ENSMODG00000003372) #12 GGNBP2 (ENSMODG00000003352) #13 ENSMODG00000040580 MRM1 (ENSMODG00000003307) #15 ENSMODG00000037875 #18 AATF (ENSMODG00000003279) #19 ACACA (ENSMODG00000003240) #21 ENSMODG00000024438 ENSMODG00000002576 TADA2A (ENSMODG00000002560) #22 ENSMODG00000024437 #23 SYNRG (ENSMODG00000002531) #24 DDX52 (ENSMODG00000002493) #25 C1orf68 (ENSMODG00000036502) ENSMODG00000044199 SPRR4 (ENSMODG00000048206) ENSMODG00000040671 ENSMODG00000043596 ENSMODG00000002237 ENSMODG00000044546 ENSMODG00000041459 ENSMODG00000036996 ENSMODG00000044485 ENSMODG00000044056 ENSMODG00000044067 Platypus MODERN SPECIES 8 BCAS3 (ENSOANG00000011524) PPM1D (ENSOANG00000011523) APPBP2 (ENSOANG00000011522) ENSOANG00000011521 #7 ENSOANG00000011519 #10 ENSOANG00000044439 ENSOANG00000048709 MYO19 (ENSOANG00000011516) #12 PIGW (ENSOANG00000011515) GGNBP2 (ENSOANG00000011514) #13 DHRS11 (ENSOANG00000011513) #14 ENSOANG00000044096 #15 LHX1 (ENSOANG00000037322) #18 AATF (ENSOANG00000011510) #19 ACACA (ENSOANG00000011506) #21 TADA2A (ENSOANG00000011505) #22 DUSP14 (ENSOANG00000007135) #23 SYNRG (ENSOANG00000007134) #24 DDX52 (ENSOANG00000007133) #25 HNF1B (ENSOANG00000007132) #27 HEATR6 (ENSOANG00000007130) #28 ENSOANG00000039281 TCF7L1 (ENSOANG00000040416) KCMF1 (ENSOANG00000007129) TMSB10 (ENSOANG00000049732) ENSOANG00000009674 ENSOANG00000010694 ENSOANG00000006510 ENSOANG00000039279 ENSOANG00000039697 ENSOANG00000039765 Sauria ANCESTRAL SPECIES 18 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00390000014787 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 Lepidosauria ANCESTRAL SPECIES 16 ENSGT00940000155672.e.b ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00960000191579 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 Episquamata ANCESTRAL SPECIES 13 ENSGT00940000155672.e.b ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00960000191579 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 Toxicofera ANCESTRAL SPECIES 23 ENSGT00940000170057 ENSGT00940000155672.e.b ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00960000191579 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00390000009142 Elapidae ANCESTRAL SPECIES 20 ENSGT00950000183166.a.a.a.a ENSGT00940000158902 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00390000001960 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00960000191579 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00390000009142 Indian cobra MODERN SPECIES DHX40 (ENSNNAG00000011222) ENSNNAG00000011640 #10 ENSNNAG00000012165 ZNHIT3 (ENSNNAG00000012191) #11 MYO19 (ENSNNAG00000012312) #12 ENSNNAG00000013693 GGNBP2 (ENSNNAG00000013709) #13 DHRS11 (ENSNNAG00000013748) #14 ENSNNAG00000013770 ENSNNAG00000013778 #15 LHX1 (ENSNNAG00000013795) #18 AATF (ENSNNAG00000013813) #19 ACACA (ENSNNAG00000014014) #21 ENSNNAG00000016761 RRP15 (ENSNNAG00000016765) TADA2A (ENSNNAG00000016782) #22 ENSNNAG00000016874 #23 SYNRG (ENSNNAG00000016892) #24 DDX52 (ENSNNAG00000016940) #25 HNF1B (ENSNNAG00000016963) #27 HEATR6 (ENSNNAG00000017006) #28 DYNLL2 (ENSNNAG00000017225) ENSNNAG00000017232 ENSNNAG00000017240 ENSNNAG00000017258 VEZF1 (ENSNNAG00000017272) CUEDC1 (ENSNNAG00000017300) MRPS23 (ENSNNAG00000017311) MSI2 (ENSNNAG00000017324) AKAP1 (ENSNNAG00000017340) ENSNNAG00000017504 Elapidae_a ANCESTRAL SPECIES 20 ENSGT00390000015991 ENSGT00950000183166.a.a.a.a ENSGT00940000158902 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000001960 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00390000000719.c ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00960000191579 ENSGT00940000155420.b ENSGT00390000001360 Acanthophiinae ANCESTRAL SPECIES 11 ENSGT00390000007230 ENSGT00390000015991 ENSGT00950000183166.a.a.a.a ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00390000001960 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00390000000719.c.a ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01030000238029 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00960000191579 ENSGT00940000155420.b ENSGT00390000001360 Eastern brown snake MODERN SPECIES 46 PTRH2 (ENSPTXG00000010403) CLTC (ENSPTXG00000010404) ENSPTXG00000010724 ENSPTXG00000010732 #10 ENSPTXG00000010825 ZNHIT3 (ENSPTXG00000010831) #11 MYO19 (ENSPTXG00000010835) #12 PIGW (ENSPTXG00000010844) GGNBP2 (ENSPTXG00000010845) #13 DHRS11 (ENSPTXG00000010847) #14 ENSPTXG00000010848 #15 LHX1 (ENSPTXG00000010850) #18 AATF (ENSPTXG00000010853) #19 ACACA (ENSPTXG00000010856) #21 ENSPTXG00000010871 TADA2A (ENSPTXG00000010875) #22 ENSPTXG00000010970 #23 SYNRG (ENSPTXG00000010971) #24 ENSPTXG00000010972 DDX52 (ENSPTXG00000010976) #25 HNF1B (ENSPTXG00000011259) #27 HEATR6 (ENSPTXG00000011262) #28 ENSPTXG00000011265 ENSPTXG00000011266 DYNLL2 (ENSPTXG00000011267) SRSF1 (ENSPTXG00000011268) VEZF1 (ENSPTXG00000011270) CUEDC1 (ENSPTXG00000011273) MRPS23 (ENSPTXG00000011275) ENSPTXG00000011276 MSI2 (ENSPTXG00000011278) Mainland tiger snake MODERN SPECIES 134 LHX1 (ENSNSUG00000018561) #18 AATF (ENSNSUG00000018559) #19 ACACA (ENSNSUG00000013544) #21 ENSNSUG00000013513 TADA2A (ENSNSUG00000013487) #22 ENSNSUG00000013486 #23 ENSNSUG00000013485 SYNRG (ENSNSUG00000012496) #24 ENSNSUG00000012495 ENSNSUG00000012494 ENSNSUG00000012493 #27 HEATR6 (ENSNSUG00000012441) #28 ENSNSUG00000012440 DYNLL2 (ENSNSUG00000012439) SRSF1 (ENSNSUG00000012438) VEZF1 (ENSNSUG00000012433) CUEDC1 (ENSNSUG00000012432) MRPS23 (ENSNSUG00000012431) ENSNSUG00000012430 ENSNSUG00000012429 Blue-lipped sea krait MODERN SPECIES 5913 ENSLLTG00000007989 #22 Lizard MODERN SPECIES 1051 GGNBP2 (ENSACAG00000002577) #13 MRM1 (ENSACAG00000002573) #15 LHX1 (ENSACAG00000002508) #18 AATF (ENSACAG00000002435) #19 ACACA (ENSACAG00000001878) #21 TADA2A (ENSACAG00000014400) #22 ENSACAG00000014395 #23 SYNRG (ENSACAG00000005381) #24 Laterata ANCESTRAL SPECIES 18 ENSGT00940000155672.e.b ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789.j #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000001618 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00960000191579 ENSGT00940000155420.b ENSGT00390000001360 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 6 CHCT1 (ENSPMRG00000016628) #7 ENSPMRG00000016642 #10 CA4 (ENSPMRG00000016672) ENSPMRG00000016677 ZNHIT3 (ENSPMRG00000016682) #11 MYO19 (ENSPMRG00000016688) #12 PIGW (ENSPMRG00000016699) GGNBP2 (ENSPMRG00000016703) #13 DHRS11 (ENSPMRG00000016712) #14 MRM1 (ENSPMRG00000016723) #15 ENSPMRG00000016733 ENSPMRG00000016735 LHX1 (ENSPMRG00000016741) #18 AATF (ENSPMRG00000016751) #19 ACACA (ENSPMRG00000017059) #21 ENSPMRG00000018816 #22 ENSPMRG00000018824 #23 SYNRG (ENSPMRG00000018932) #24 DDX52 (ENSPMRG00000019311) #25 HNF1B (ENSPMRG00000019334) #27 HEATR6 (ENSPMRG00000019382) #28 DYNLL2 (ENSPMRG00000019399) ENSPMRG00000019406 SRSF1 (ENSPMRG00000019413) VEZF1 (ENSPMRG00000019428) CUEDC1 (ENSPMRG00000019437) MRPS23 (ENSPMRG00000019448) ENSPMRG00000019456 MSI2 (ENSPMRG00000019465) AKAP1 (ENSPMRG00000019481) ENSPMRG00000019829 Common wall lizard MODERN SPECIES 285 ENSPMRG00000022284 #22 Argentine black and white tegu MODERN SPECIES 92 BCAS3 (ENSSMRG00000014966) PPM1D (ENSSMRG00000014964) APPBP2 (ENSSMRG00000014962) CHCT1 (ENSSMRG00000014959) #7 ENSSMRG00000014956 #10 CA4 (ENSSMRG00000014954) ZNHIT3 (ENSSMRG00000014952) #11 MYO19 (ENSSMRG00000014275) #12 PIGW (ENSSMRG00000014273) GGNBP2 (ENSSMRG00000014271) #13 DHRS11 (ENSSMRG00000014270) #14 MRM1 (ENSSMRG00000014269) #15 LHX1 (ENSSMRG00000014262) #18 AATF (ENSSMRG00000014261) #19 ACACA (ENSSMRG00000014258) #21 TADA2A (ENSSMRG00000014256) #22 ENSSMRG00000014255 #23 SYNRG (ENSSMRG00000014254) #24 DDX52 (ENSSMRG00000014253) #25 HNF1B (ENSSMRG00000014252) #27 HEATR6 (ENSSMRG00000013324) #28 ENSSMRG00000013313 DYNLL2 (ENSSMRG00000013312) SRSF1 (ENSSMRG00000013311) VEZF1 (ENSSMRG00000013305) CUEDC1 (ENSSMRG00000013303) MRPS23 (ENSSMRG00000013301) ENSSMRG00000013299 ENSSMRG00000013297 MSI2 (ENSSMRG00000013241) AKAP1 (ENSSMRG00000013240) tuatara MODERN SPECIES 967 PPM1D (ENSSPUG00000016731) APPBP2 (ENSSPUG00000016740) CHCT1 (ENSSPUG00000016758) #7 ENSSPUG00000000044 #10 ZNHIT3 (ENSSPUG00000000180) #11 ENSSPUG00000000186 ENSSPUG00000000189 #12 ENSSPUG00000000195 #12 PIGW (ENSSPUG00000000211) GGNBP2 (ENSSPUG00000000220) #13 DHRS11 (ENSSPUG00000000235) #14 MRM1 (ENSSPUG00000000265) #15 LHX1 (ENSSPUG00000000273) #18 AATF (ENSSPUG00000000290) #19 ACACA (ENSSPUG00000000325) #21 TADA2A (ENSSPUG00000000459) #22 ENSSPUG00000000487 #23 SYNRG (ENSSPUG00000000509) #24 ENSSPUG00000000716 #24 DDX52 (ENSSPUG00000000720) #25 HNF1B (ENSSPUG00000000726) #27 ENSSPUG00000000789 DYNLL2 (ENSSPUG00000000794) SRSF1 (ENSSPUG00000000804) VEZF1 (ENSSPUG00000000822) CUEDC1 (ENSSPUG00000000851) MRPS23 (ENSSPUG00000000886) ENSSPUG00000000890 ENSSPUG00000000913 ENSSPUG00000000931 NF1 (ENSSPUG00000000955) Archelosauria ANCESTRAL SPECIES 18 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00390000014787 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 Archosauria ANCESTRAL SPECIES 18 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00390000014787 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 Aves ANCESTRAL SPECIES 18 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00390000009142 Neognathae ANCESTRAL SPECIES 18 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00940000160802 Galloanserae ANCESTRAL SPECIES 17 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00940000160802 Anatidae ANCESTRAL SPECIES 34 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT01100000264066 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00940000160802 Pink-footed goose MODERN SPECIES 63 PPM1D (ENSABRG00000019627) APPBP2 (ENSABRG00000019622) CHCT1 (ENSABRG00000019618) #7 ENSABRG00000019609 #10 CA4 (ENSABRG00000019594) ENSABRG00000019590 ENSABRG00000019587 MYO19 (ENSABRG00000019578) #12 PIGW (ENSABRG00000019576) GGNBP2 (ENSABRG00000019571) #13 DHRS11 (ENSABRG00000019568) #14 MRM1 (ENSABRG00000019562) #15 LHX1 (ENSABRG00000019545) #18 AATF (ENSABRG00000019505) #19 ACACA (ENSABRG00000018771) #21 TADA2A (ENSABRG00000018526) #22 DUSP14 (ENSABRG00000018511) #23 SYNRG (ENSABRG00000018048) #24 DDX52 (ENSABRG00000017853) #25 HNF1B (ENSABRG00000017830) #27 HEATR6 (ENSABRG00000017590) #28 DYNLL2 (ENSABRG00000017541) ENSABRG00000017538 SRSF1 (ENSABRG00000017519) VEZF1 (ENSABRG00000017511) CUEDC1 (ENSABRG00000017507) MRPS23 (ENSABRG00000017505) MSI2 (ENSABRG00000017453) AKAP1 (ENSABRG00000017421) EVI2A (ENSABRG00000017414) OMG (ENSABRG00000017409) Duck MODERN SPECIES 11 BCAS3 (ENSAPLG00000008363) PPM1D (ENSAPLG00000008276) APPBP2 (ENSAPLG00000008094) CHCT1 (ENSAPLG00000026871) #7 ENSAPLG00000007802 #10 CA4 (ENSAPLG00000007520) ZNHIT3 (ENSAPLG00000021693) #11 MYO19 (ENSAPLG00000007223) #12 PIGW (ENSAPLG00000011468) GGNBP2 (ENSAPLG00000006578) #13 DHRS11 (ENSAPLG00000006507) #14 MRM1 (ENSAPLG00000006433) #15 LHX1 (ENSAPLG00000006228) #18 AATF (ENSAPLG00000006346) #19 ACACA (ENSAPLG00000006678) #21 TADA2A (ENSAPLG00000008896) #22 ENSAPLG00000027707 DUSP14 (ENSAPLG00000011641) #23 SYNRG (ENSAPLG00000009643) #24 ENSAPLG00000030448 HNF1B (ENSAPLG00000027870) #27 HEATR6 (ENSAPLG00000010712) #28 ENSAPLG00000024922 DYNLL2 (ENSAPLG00000019910) SRSF1 (ENSAPLG00000023990) VEZF1 (ENSAPLG00000011422) CUEDC1 (ENSAPLG00000026352) MRPS23 (ENSAPLG00000017268) ENSAPLG00000028746 AKAP1 (ENSAPLG00000014520) NF1 (ENSAPLG00000014612) Phasianidae ANCESTRAL SPECIES 17 ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00910000148704 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00550000074797.b ENSGT00390000003004 Phasianidae_b ANCESTRAL SPECIES 17 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00550000074797.b ENSGT00390000003004 Chicken MODERN SPECIES 10 BCAS3 (ENSGALG00010029324) PPM1D (ENSGALG00010029198) APPBP2 (ENSGALG00010029199) ENSGALG00010029167 #10 CA4 (ENSGALG00010029180) ENSGALG00010029176 ZNHIT3 (ENSGALG00010029173) #11 MYO19 (ENSGALG00010029181) #12 GGNBP2 (ENSGALG00010029925) #13 PIGW (ENSGALG00010029179) DHRS11 (ENSGALG00010029194) #14 MRM1 (ENSGALG00010029196) #15 LHX1 (ENSGALG00010029197) #18 AATF (ENSGALG00010029352) #19 ACACA (ENSGALG00010029360) #21 TADA2A (ENSGALG00010029362) #22 DUSP14 (ENSGALG00010029367) #23 SYNRG (ENSGALG00010029935) #24 DDX52 (ENSGALG00010029368) #25 HNF1B (ENSGALG00010029161) #27 HEATR6 (ENSGALG00010029182) #28 DYNLL2 (ENSGALG00010029184) ENSGALG00010029185 SRSF1 (ENSGALG00010029187) VEZF1 (ENSGALG00010029505) CUEDC1 (ENSGALG00010029511) MRPS23 (ENSGALG00010029514) MSI2 (ENSGALG00010029517) AKAP1 (ENSGALG00010029522) NF1 (ENSGALG00010029534) EVI2A (ENSGALG00010029532) Turkey MODERN SPECIES 13 ENSMGAG00000015524 ENSMGAG00000008300 ENSMGAG00000008293 ENSMGAG00000008235 ENSMGAG00000008268 VEZF1 (ENSMGAG00000008207) ENSMGAG00000008199 ENSMGAG00000020322 ENSMGAG00000008146 #28 ENSMGAG00000021008 #27 ENSMGAG00000019090 ENSMGAG00000008126 #27 DDX52 (ENSMGAG00000008091) #25 ENSMGAG00000015503 #23 ENSMGAG00000008060 #24 TADA2A (ENSMGAG00000008038) #22 ENSMGAG00000020058 #21 ENSMGAG00000020336 ENSMGAG00000007951 #21 ENSMGAG00000007924 #18 ENSMGAG00000021909 #15 ENSMGAG00000007857 #14 ENSMGAG00000007773 #13 ENSMGAG00000022851 ENSMGAG00000015491 ENSMGAG00000016711 ENSMGAG00000007841 #12 ENSMGAG00000007723 #10 ENSMGAG00000007761 ENSMGAG00000007837 ENSMGAG00000007687 Japanese quail MODERN SPECIES 10 PPM1D (ENSCJPG00005017402) APPBP2 (ENSCJPG00005017404) CHCT1 (ENSCJPG00005017406) #7 ENSCJPG00005017423 #10 CA4 (ENSCJPG00005017770) ZNHIT3 (ENSCJPG00005017771) #11 MYO19 (ENSCJPG00005017772) #12 PIGW (ENSCJPG00005017775) GGNBP2 (ENSCJPG00005017776) #13 DHRS11 (ENSCJPG00005017777) #14 MRM1 (ENSCJPG00005017778) #15 LHX1 (ENSCJPG00005017780) #18 AATF (ENSCJPG00005017781) #19 ACACA (ENSCJPG00005017783) #21 ENSCJPG00005018462 TADA2A (ENSCJPG00005018463) #22 DUSP14 (ENSCJPG00005018464) #23 SYNRG (ENSCJPG00005018465) #24 DDX52 (ENSCJPG00005018634) #25 HNF1B (ENSCJPG00005018638) #27 HEATR6 (ENSCJPG00005018639) #28 ENSCJPG00005018640 DYNLL2 (ENSCJPG00005018641) SRSF1 (ENSCJPG00005018642) VEZF1 (ENSCJPG00005018643) CUEDC1 (ENSCJPG00005018644) MRPS23 (ENSCJPG00005018645) ENSCJPG00005018646 ENSCJPG00005018647 AKAP1 (ENSCJPG00005018648) ENSCJPG00005018656 Neognathae_b ANCESTRAL SPECIES 20 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00940000160802 Passeriformes ANCESTRAL SPECIES 18 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00940000160802 Great tit MODERN SPECIES 9 TBX2 (ENSPMJG00000019833) BCAS3 (ENSPMJG00000019834) PPM1D (ENSPMJG00000019835) APPBP2 (ENSPMJG00000019837) ENSPMJG00000019838 #10 CA4 (ENSPMJG00000019839) ENSPMJG00000019840 MYO19 (ENSPMJG00000019841) #12 PIGW (ENSPMJG00000019842) GGNBP2 (ENSPMJG00000019843) #13 DHRS11 (ENSPMJG00000019844) #14 MRM1 (ENSPMJG00000019845) #15 LHX1 (ENSPMJG00000019848) #18 AATF (ENSPMJG00000019849) #19 ACACA (ENSPMJG00000019850) #21 TADA2A (ENSPMJG00000019851) #22 DUSP14 (ENSPMJG00000019853) #23 SYNRG (ENSPMJG00000019854) #24 DDX52 (ENSPMJG00000019855) #25 HNF1B (ENSPMJG00000019856) #27 HEATR6 (ENSPMJG00000019857) #28 DYNLL2 (ENSPMJG00000019858) ENSPMJG00000019859 SRSF1 (ENSPMJG00000019861) VEZF1 (ENSPMJG00000019863) CUEDC1 (ENSPMJG00000019864) MRPS23 (ENSPMJG00000019865) MSI2 (ENSPMJG00000019867) AKAP1 (ENSPMJG00000019868) NF1 (ENSPMJG00000019869) ENSPMJG00000019870 Passeriformes_d ANCESTRAL SPECIES 18 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00960000188608 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00940000160802 Passeriformes_g ANCESTRAL SPECIES 18 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00960000188608 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00940000160802 Medium ground finch MODERN SPECIES 71 BCAS3 (ENSGFOG00000008504) PPM1D (ENSGFOG00000008486) ENSGFOG00000008463 ENSGFOG00000010896 #10 CA4 (ENSGFOG00000010748) ENSGFOG00000010730 ENSGFOG00000010727 MYO19 (ENSGFOG00000010706) #12 PIGW (ENSGFOG00000010699) GGNBP2 (ENSGFOG00000010694) #13 DHRS11 (ENSGFOG00000010687) #14 ENSGFOG00000010686 #15 ENSGFOG00000010682 #18 AATF (ENSGFOG00000010679) #19 ACACA (ENSGFOG00000008684) #21 TADA2A (ENSGFOG00000008462) #22 DUSP14 (ENSGFOG00000008459) #23 SYNRG (ENSGFOG00000008120) #24 DDX52 (ENSGFOG00000008042) #25 HNF1B (ENSGFOG00000008014) #27 HEATR6 (ENSGFOG00000007442) #28 ENSGFOG00000007405 DYNLL2 (ENSGFOG00000007400) SRSF1 (ENSGFOG00000007381) VEZF1 (ENSGFOG00000007360) CUEDC1 (ENSGFOG00000007224) ENSGFOG00000007194 ENSGFOG00000007182 MSI2 (ENSGFOG00000007178) AKAP1 (ENSGFOG00000007156) EVI2A (ENSGFOG00000007146) Passeroidea ANCESTRAL SPECIES 20 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00960000188608 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 ENSGT00940000160802 Zebra finch MODERN SPECIES 10 TBX2 (ENSTGUG00000007813) BCAS3 (ENSTGUG00000007829) PPM1D (ENSTGUG00000007882) ENSTGUG00000007896 ENSTGUG00000007936 #10 CA4 (ENSTGUG00000007977) ENSTGUG00000007995 MYO19 (ENSTGUG00000007997) #12 PIGW (ENSTGUG00000008016) GGNBP2 (ENSTGUG00000008018) #13 DHRS11 (ENSTGUG00000008041) #14 ENSTGUG00000008048 #15 LHX1 (ENSTGUG00000018852) #18 AATF (ENSTGUG00000008056) #19 ACACA (ENSTGUG00000008074) #21 TADA2A (ENSTGUG00000008238) #22 DUSP14 (ENSTGUG00000026045) #23 SYNRG (ENSTGUG00000008265) #24 DDX52 (ENSTGUG00000008303) #25 HNF1B (ENSTGUG00000008342) #27 HEATR6 (ENSTGUG00000008368) #28 ENSTGUG00000008415 DYNLL2 (ENSTGUG00000021743) SRSF1 (ENSTGUG00000008416) VEZF1 (ENSTGUG00000008421) CUEDC1 (ENSTGUG00000008433) ENSTGUG00000023410 MSI2 (ENSTGUG00000008452) AKAP1 (ENSTGUG00000023588) EVI2A (ENSTGUG00000008559) OMG (ENSTGUG00000008562) Common canary MODERN SPECIES 28 BCAS3 (ENSSCAG00000011216) PPM1D (ENSSCAG00000011231) APPBP2 (ENSSCAG00000011242) ENSSCAG00000011244 #10 CA4 (ENSSCAG00000011254) ENSSCAG00000011259 ZNHIT3 (ENSSCAG00000011260) #11 MYO19 (ENSSCAG00000011266) #12 PIGW (ENSSCAG00000011270) GGNBP2 (ENSSCAG00000011275) #13 DHRS11 (ENSSCAG00000011281) #14 ENSSCAG00000011285 #15 LHX1 (ENSSCAG00000011295) #18 AATF (ENSSCAG00000011306) #19 ACACA (ENSSCAG00000011345) #21 TADA2A (ENSSCAG00000011408) #22 DUSP14 (ENSSCAG00000011412) #23 SYNRG (ENSSCAG00000011420) #24 DDX52 (ENSSCAG00000011446) #25 HNF1B (ENSSCAG00000011452) #27 HEATR6 (ENSSCAG00000011493) #28 DYNLL2 (ENSSCAG00000011650) ENSSCAG00000011653 VEZF1 (ENSSCAG00000011658) CUEDC1 (ENSSCAG00000011671) MRPS23 (ENSSCAG00000011683) ENSSCAG00000011685 ENSSCAG00000011692 AKAP1 (ENSSCAG00000011695) NF1 (ENSSCAG00000011788) ENSSCAG00000012300 Flycatcher MODERN SPECIES 9 ENSFALG00000005385 ENSFALG00000005365 #10 CA4 (ENSFALG00000025811) ENSFALG00000015093 MYO19 (ENSFALG00000005347) #12 PIGW (ENSFALG00000015077) GGNBP2 (ENSFALG00000005326) #13 DHRS11 (ENSFALG00000027969) #14 ENSFALG00000026751 #15 ENSFALG00000026655 ENSFALG00000027138 ENSFALG00000028249 LHX1 (ENSFALG00000005291) #18 AATF (ENSFALG00000005270) #19 ACACA (ENSFALG00000005248) #21 TADA2A (ENSFALG00000005233) #22 DUSP14 (ENSFALG00000015065) #23 ENSFALG00000005200 #24 DDX52 (ENSFALG00000005155) #25 HNF1B (ENSFALG00000005101) #27 ENSFALG00000005086 #28 ENSFALG00000027237 DYNLL2 (ENSFALG00000007559) SRSF1 (ENSFALG00000028064) VEZF1 (ENSFALG00000005040) CUEDC1 (ENSFALG00000005011) ENSFALG00000028000 ENSFALG00000004984 ENSFALG00000025218 AKAP1 (ENSFALG00000004977) EVI2A (ENSFALG00000004972) Neognathae_c ANCESTRAL SPECIES 22 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00670000098452 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00550000074797.b ENSGT00390000003004 Golden eagle DUPLICATION Golden eagle MODERN SPECIES 1 PPM1D (ENSACCG00020007311) APPBP2 (ENSACCG00020007332) CHCT1 (ENSACCG00020007346) #7 ENSACCG00020007366 #10 CA4 (ENSACCG00020007393) ENSACCG00020007402 ZNHIT3 (ENSACCG00020007411) #11 MYO19 (ENSACCG00020007428) #12 PIGW (ENSACCG00020007448) GGNBP2 (ENSACCG00020007459) #13 DHRS11 (ENSACCG00020007467) #14 MRM1 (ENSACCG00020007477) #15 LHX1 (ENSACCG00020007491) #18 AATF (ENSACCG00020007511) #19 ACACA (ENSACCG00020007623) #21 ENSACCG00020007748 #22 ENSACCG00020007759 #22 DUSP14 (ENSACCG00020007767) #23 SYNRG (ENSACCG00020007796) #24 DDX52 (ENSACCG00020007854) #25 HNF1B (ENSACCG00020007892) #27 HEATR6 (ENSACCG00020008062) #28 DYNLL2 (ENSACCG00020008182) ENSACCG00020008189 SRSF1 (ENSACCG00020008202) VEZF1 (ENSACCG00020008218) CUEDC1 (ENSACCG00020008235) MRPS23 (ENSACCG00020008251) MSI2 (ENSACCG00020008296) AKAP1 (ENSACCG00020008330) NF1 (ENSACCG00020008396) Golden eagle MODERN SPECIES 1 APPBP2 (ENSACCG00020007332) CHCT1 (ENSACCG00020007346) #7 ENSACCG00020007366 #10 CA4 (ENSACCG00020007393) ENSACCG00020007402 ZNHIT3 (ENSACCG00020007411) #11 MYO19 (ENSACCG00020007428) #12 PIGW (ENSACCG00020007448) GGNBP2 (ENSACCG00020007459) #13 DHRS11 (ENSACCG00020007467) #14 MRM1 (ENSACCG00020007477) #15 LHX1 (ENSACCG00020007491) #18 AATF (ENSACCG00020007511) #19 ACACA (ENSACCG00020007623) #21 ENSACCG00020007748 #22 ENSACCG00020007759 #22 DUSP14 (ENSACCG00020007767) #23 SYNRG (ENSACCG00020007796) #24 DDX52 (ENSACCG00020007854) #25 HNF1B (ENSACCG00020007892) #27 HEATR6 (ENSACCG00020008062) #28 DYNLL2 (ENSACCG00020008182) ENSACCG00020008189 SRSF1 (ENSACCG00020008202) VEZF1 (ENSACCG00020008218) CUEDC1 (ENSACCG00020008235) MRPS23 (ENSACCG00020008251) MSI2 (ENSACCG00020008296) AKAP1 (ENSACCG00020008330) NF1 (ENSACCG00020008396) EVI2A (ENSACCG00020008446) Kakapo MODERN SPECIES 58 PITPNA (ENSSHBG00005007032) INPP5K (ENSSHBG00005007074) MYO1C (ENSSHBG00005007594) YWHAE (ENSSHBG00005016004) CRK (ENSSHBG00005016007) NCBP3 (ENSSHBG00005016012) LRRC75A (ENSSHBG00005016036) TMEM248 (ENSSHBG00005016043) RABGEF1 (ENSSHBG00005016047) KCTD7 (ENSSHBG00005016052) DHRS11 (ENSSHBG00005016056) #14 MRM1 (ENSSHBG00005016059) #15 LHX1 (ENSSHBG00005016063) #18 AATF (ENSSHBG00005016069) #19 ACACA (ENSSHBG00005016113) #21 TADA2A (ENSSHBG00005016799) #22 DUSP14 (ENSSHBG00005016807) #23 SYNRG (ENSSHBG00005016859) #24 DDX52 (ENSSHBG00005017631) #25 HNF1B (ENSSHBG00005017665) #27 HEATR6 (ENSSHBG00005017679) #28 DYNLL2 (ENSSHBG00005017695) ENSSHBG00005017697 SRSF1 (ENSSHBG00005017701) VEZF1 (ENSSHBG00005017705) CUEDC1 (ENSSHBG00005017714) MRPS23 (ENSSHBG00005017718) MSI2 (ENSSHBG00005017727) AKAP1 (ENSSHBG00005017734) NF1 (ENSSHBG00005017773) ENSSHBG00005017892 African ostrich MODERN SPECIES 540 BCAS3 (ENSSCUG00000005795) PPM1D (ENSSCUG00000005788) ENSSCUG00000005785 CHCT1 (ENSSCUG00000005782) #7 ENSSCUG00000005779 #10 CA4 (ENSSCUG00000005776) ENSSCUG00000005773 ENSSCUG00000005772 MYO19 (ENSSCUG00000005769) #12 PIGW (ENSSCUG00000005767) GGNBP2 (ENSSCUG00000005760) #13 ENSSCUG00000005756 #15 ENSSCUG00000005750 #18 AATF (ENSSCUG00000005743) #19 ACACA (ENSSCUG00000005722) #21 TADA2A (ENSSCUG00000005702) #22 DUSP14 (ENSSCUG00000005699) #23 SYNRG (ENSSCUG00000005690) #24 DDX52 (ENSSCUG00000005683) #25 Australian saltwater crocodile MODERN SPECIES 50 PPM1D (ENSCPRG00005010702) ENSCPRG00005010617 CHCT1 (ENSCPRG00005010609) #7 ENSCPRG00005010579 #10 CA4 (ENSCPRG00005010519) ENSCPRG00005010510 ZNHIT3 (ENSCPRG00005010501) #11 MYO19 (ENSCPRG00005010494) #12 PIGW (ENSCPRG00005010492) GGNBP2 (ENSCPRG00005010476) #13 DHRS11 (ENSCPRG00005010472) #14 MRM1 (ENSCPRG00005010467) #15 LHX1 (ENSCPRG00005010460) #18 AATF (ENSCPRG00005010450) #19 ACACA (ENSCPRG00005010384) #21 TADA2A (ENSCPRG00005010368) #22 DUSP14 (ENSCPRG00005010366) #23 SYNRG (ENSCPRG00005010334) #24 DDX52 (ENSCPRG00005010311) #25 HNF1B (ENSCPRG00005010275) #27 HEATR6 (ENSCPRG00005010268) #28 ENSCPRG00005010263 DYNLL2 (ENSCPRG00005010257) SRSF1 (ENSCPRG00005010254) VEZF1 (ENSCPRG00005010237) CUEDC1 (ENSCPRG00005010228) MRPS23 (ENSCPRG00005010225) CCDC182 (ENSCPRG00005010221) MSI2 (ENSCPRG00005010047) AKAP1 (ENSCPRG00005010004) EVI2A (ENSCPRG00005010002) Cryptodira ANCESTRAL SPECIES 18 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00960000191579 ENSGT00390000014787 ENSGT00940000155420.b ENSGT00390000001360 Testudinoidea ANCESTRAL SPECIES 15 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00390000014787 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 Emydidae ANCESTRAL SPECIES 16 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00390000014787 ENSGT00940000155420.b ENSGT00390000001360 ENSGT00390000003004 Three-toed box turtle MODERN SPECIES 106 PPM1D (ENSTMTG00000022307) APPBP2 (ENSTMTG00000022301) CHCT1 (ENSTMTG00000022300) #7 ENSTMTG00000022293 #10 CA4 (ENSTMTG00000022288) ZNHIT3 (ENSTMTG00000022286) #11 PIGW (ENSTMTG00000022284) MYO19 (ENSTMTG00000022281) #12 GGNBP2 (ENSTMTG00000022280) #13 DHRS11 (ENSTMTG00000022277) #14 MRM1 (ENSTMTG00000022275) #15 LHX1 (ENSTMTG00000022272) #18 AATF (ENSTMTG00000022268) #19 ENSTMTG00000022265 ACACA (ENSTMTG00000016499) #21 TADA2A (ENSTMTG00000015654) #22 ENSTMTG00000015644 #23 SYNRG (ENSTMTG00000015566) #24 DDX52 (ENSTMTG00000015531) #25 HNF1B (ENSTMTG00000015511) #27 HEATR6 (ENSTMTG00000015476) #28 DYNLL2 (ENSTMTG00000015462) ENSTMTG00000015454 SRSF1 (ENSTMTG00000015436) VEZF1 (ENSTMTG00000015412) CUEDC1 (ENSTMTG00000015391) MRPS23 (ENSTMTG00000015381) ENSTMTG00000015371 ENSTMTG00000015360 MSI2 (ENSTMTG00000015346) AKAP1 (ENSTMTG00000015322) painted turtle MODERN SPECIES 2371 PPM1D (ENSCPBG00000009459) APPBP2 (ENSCPBG00000009466) CHCT1 (ENSCPBG00000009476) #7 ENSCPBG00000009495 #10 CA4 (ENSCPBG00000009527) ZNHIT3 (ENSCPBG00000009540) #11 MYO19 (ENSCPBG00000009546) #12 PIGW (ENSCPBG00000009555) GGNBP2 (ENSCPBG00000009558) #13 DHRS11 (ENSCPBG00000009569) #14 ENSCPBG00000009581 #15 ENSCPBG00000009591 LHX1 (ENSCPBG00000009599) #18 AATF (ENSCPBG00000009608) #19 ACACA (ENSCPBG00000009636) #21 TADA2A (ENSCPBG00000009751) #22 ENSCPBG00000009757 #23 SYNRG (ENSCPBG00000009769) #24 DDX52 (ENSCPBG00000009806) #25 HNF1B (ENSCPBG00000009815) #27 HEATR6 (ENSCPBG00000009827) #28 ENSCPBG00000009833 DYNLL2 (ENSCPBG00000009838) SRSF1 (ENSCPBG00000009851) VEZF1 (ENSCPBG00000009860) CUEDC1 (ENSCPBG00000009891) MRPS23 (ENSCPBG00000009923) CCDC182 (ENSCPBG00000009929) MSI2 (ENSCPBG00000009942) AKAP1 (ENSCPBG00000010075) NF1 (ENSCPBG00000010238) Testudinidae ANCESTRAL SPECIES 19 ENSGT00390000006454 ENSGT00940000155672.f ENSGT00390000010722 ENSGT00390000003769 #7 ENSGT00940000155797 #10 ENSGT00940000155690 ENSGT00390000010822 #11 ENSGT00940000157382 #12 ENSGT00390000013520 ENSGT00390000009552 #13 ENSGT00840000129887 #14 ENSGT00390000018761 #15 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675.e #23 ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT00390000000378.d.a ENSGT00960000188608 ENSGT00940000155585 ENSGT00940000155932 ENSGT00390000006762 ENSGT00390000009030 ENSGT00390000014787 ENSGT00940000155420.b ENSGT01000000220594 ENSGT00390000001360 Goode s thornscrub tortoise MODERN SPECIES 8 BCAS3 (ENSGEVG00005011495) PPM1D (ENSGEVG00005011628) APPBP2 (ENSGEVG00005011694) CHCT1 (ENSGEVG00005011759) #7 ENSGEVG00005011951 #10 CA4 (ENSGEVG00005012044) ZNHIT3 (ENSGEVG00005012181) #11 MYO19 (ENSGEVG00005012383) #12 PIGW (ENSGEVG00005013682) GGNBP2 (ENSGEVG00005013707) #13 DHRS11 (ENSGEVG00005013757) #14 MRM1 (ENSGEVG00005013838) #15 LHX1 (ENSGEVG00005013865) #18 AATF (ENSGEVG00005013931) #19 ACACA (ENSGEVG00005014026) #21 TADA2A (ENSGEVG00005014352) #22 ENSGEVG00005014884 #23 SYNRG (ENSGEVG00005014956) #24 DDX52 (ENSGEVG00005015150) #25 HNF1B (ENSGEVG00005015200) #27 HEATR6 (ENSGEVG00005015763) #28 DYNLL2 (ENSGEVG00005017841) ENSGEVG00005017859 SRSF1 (ENSGEVG00005017884) VEZF1 (ENSGEVG00005017914) CUEDC1 (ENSGEVG00005017949) MRPS23 (ENSGEVG00005017970) CCDC182 (ENSGEVG00005017988) MSI2 (ENSGEVG00005018023) ENSGEVG00005018115 ENSGEVG00005018135 Abingdon island giant tortoise MODERN SPECIES 673 PPM1D (ENSCABG00000005673) APPBP2 (ENSCABG00000005674) CHCT1 (ENSCABG00000005675) #7 ENSCABG00000005706 #10 CA4 (ENSCABG00000006320) ZNHIT3 (ENSCABG00000006402) #11 ENSCABG00000006406 #12 PIGW (ENSCABG00000006409) GGNBP2 (ENSCABG00000006415) #13 DHRS11 (ENSCABG00000006424) #14 MRM1 (ENSCABG00000006425) #15 LHX1 (ENSCABG00000006426) #18 AATF (ENSCABG00000006427) #19 ACACA (ENSCABG00000006622) #21 ENSCABG00000015897 TADA2A (ENSCABG00000015903) #22 ENSCABG00000015915 #23 SYNRG (ENSCABG00000015959) #24 DDX52 (ENSCABG00000016458) #25 HNF1B (ENSCABG00000016461) #27 HEATR6 (ENSCABG00000016463) #28 DYNLL2 (ENSCABG00000017156) ENSCABG00000017157 SRSF1 (ENSCABG00000017158) VEZF1 (ENSCABG00000017159) CUEDC1 (ENSCABG00000017165) MRPS23 (ENSCABG00000017168) CCDC182 (ENSCABG00000017170) MSI2 (ENSCABG00000017180) ENSCABG00000017376 AKAP1 (ENSCABG00000017378) Chinese turtle MODERN SPECIES 2231 PPM1D (ENSPSIG00000014706) APPBP2 (ENSPSIG00000013476) CHCT1 (ENSPSIG00000013088) #7 ENSPSIG00000010750 #10 CA4 (ENSPSIG00000010244) ENSPSIG00000000503 ENSPSIG00000010227 MYO19 (ENSPSIG00000009853) #12 PIGW (ENSPSIG00000000497) GGNBP2 (ENSPSIG00000006415) #13 DHRS11 (ENSPSIG00000017672) #14 MRM1 (ENSPSIG00000017622) #15 LHX1 (ENSPSIG00000016729) #18 AATF (ENSPSIG00000015905) #19 ACACA (ENSPSIG00000011010) #21 TADA2A (ENSPSIG00000010920) #22 ENSPSIG00000010913 #23 SYNRG (ENSPSIG00000010631) #24 DDX52 (ENSPSIG00000010226) #25 HNF1B (ENSPSIG00000009511) #27 HEATR6 (ENSPSIG00000009325) #28 DYNLL2 (ENSPSIG00000009309) SRSF1 (ENSPSIG00000009000) VEZF1 (ENSPSIG00000008918) CUEDC1 (ENSPSIG00000008775) MSI2 (ENSPSIG00000008618) AKAP1 (ENSPSIG00000007675) EVI2A (ENSPSIG00000000490) ENSPSIG00000007637 NF1 (ENSPSIG00000017227) WSB1 (ENSPSIG00000016749) Anura ANCESTRAL SPECIES 4 ENSGT00940000167691 ENSGT00940000160834 #18 ENSGT00390000000288 #19 ENSGT00940000156706 #21 ENSGT00940000156751 #22 ENSGT00940000160675 #23 ENSGT00390000010789 #24 ENSGT00730000111291 ENSGT01020000230351.F ENSGT00530000063370.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00730000110943.B ENSGT00390000015428 ENSGT00940000160605 ENSGT00730000111247 ENSGT00910000144281 ENSGT00940000155735 Frog MODERN SPECIES 2 shisa4 (ENSXETG00000026919) ipo9 (ENSXETG00000007974) klhl12 (ENSXETG00000025907) rabif (ENSXETG00000034800) tuba5 (ENSXETG00000007975) kdm5b (ENSXETG00000007973) adipor1 (ENSXETG00000007972) ENSXETG00000007969 cenpo (ENSXETG00000007968) ENSXETG00000046012 lhx1 (ENSXETG00000008963) #18 ENSXETG00000046048 aatf (ENSXETG00000008959) #19 ENSXETG00000045038 acaca (ENSXETG00000008955) #21 tada2a (ENSXETG00000008953) #22 srsf1 (ENSXETG00000008954) vezf1 (ENSXETG00000008951) ENSXETG00000041485 cuedc1 (ENSXETG00000008949) guca1c (ENSXETG00000009207) morc1 (ENSXETG00000043544) ENSXETG00000044795 nectin3 (ENSXETG00000009202) plcxd2 (ENSXETG00000009201) abhd10 (ENSXETG00000009199) ENSXETG00000038797 stmn1 (ENSXETG00000009198) pafah2 (ENSXETG00000040379) ENSXETG00000040588 thdl18 (ENSXETG00000026899) Leishan spiny toad MODERN SPECIES 5 RABIF (ENSLLEG00000009189) ENSLLEG00000009163 DYNLL2 (ENSLLEG00000009138) HEATR6 (ENSLLEG00000008960) #28 ENSLLEG00000008928 ENSLLEG00000008905 ENSLLEG00000008772 ENSLLEG00000008748 ENSLLEG00000008727 ENSLLEG00000008705 LHX1 (ENSLLEG00000008549) #18 ENSLLEG00000008518 AATF (ENSLLEG00000008387) #19 ENSLLEG00000008349 ACACA (ENSLLEG00000006637) #21 TADA2A (ENSLLEG00000005682) #22 ENSLLEG00000005567 #23 SYNRG (ENSLLEG00000005219) #24 PPARD (ENSLLEG00000005112) ENSLLEG00000005065 ENSLLEG00000005042 ENSLLEG00000004996 SNRPE (ENSLLEG00000004964) ENSLLEG00000004941 ENSLLEG00000004906 SOX13 (ENSLLEG00000004859) ENSLLEG00000004845 ENSLLEG00000004838 ENSLLEG00000004834 ETNK2 (ENSLLEG00000004821) REN (ENSLLEG00000004745) Coelacanth MODERN SPECIES 235 ENSLACG00000001702 ENSLACG00000003557 ENSLACG00000004040 ENSLACG00000008378 ENSLACG00000022419 VPS53 (ENSLACG00000010127) TADA2A (ENSLACG00000011233) #22 DUSP14 (ENSLACG00000011781) #23 SYNRG (ENSLACG00000011849) #24 DDX52 (ENSLACG00000012514) #25 HEATR6 (ENSLACG00000012983) #28 SRSF1 (ENSLACG00000014160) VEZF1 (ENSLACG00000014318) CUEDC1 (ENSLACG00000014669) MRPS23 (ENSLACG00000015044) MSI2 (ENSLACG00000016798) AKAP1 (ENSLACG00000016864) NF1 (ENSLACG00000017003) ENSLACG00000017089 OMG (ENSLACG00000017129) WSB1 (ENSLACG00000017388) KSR1 (ENSLACG00000017610) Actinopterygii ANCESTRAL SPECIES 50 ENSGT00940000166439 ENSGT00390000002453 ENSGT00940000158096 ENSGT00940000158885 ENSGT00510000047446 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT00950000182901 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000168454 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00940000164330 ENSGT00390000016675 #28 ENSGT01100000264080 ENSGT00390000017203 ENSGT00950000182987.c.a.b.b ENSGT00940000160082 ENSGT00600000084481 ENSGT00390000012340 ENSGT00390000017317 Neopterygii ANCESTRAL SPECIES 27 ENSGT00940000166439 ENSGT00390000002453 ENSGT00940000158096 ENSGT00940000158885 ENSGT00510000047446 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT00950000182901 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000168454 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000016675 #28 ENSGT01100000263696 ENSGT00390000000378.d.b ENSGT00390000001618 ENSGT00390000000378.d.a ENSGT00940000155585 ENSGT00390000017203 ENSGT00950000182987.c.a.b.b ENSGT00940000160082 ENSGT00600000084481 ENSGT00390000012340 Spotted gar MODERN SPECIES 661 lyrm9 (ENSLOCG00000005647) nlk2 (ENSLOCG00000005662) ENSLOCG00000005684 BHLHA9 (ENSLOCG00000005703) ENSLOCG00000017438 WSCD1 (ENSLOCG00000005722) sdf2 (ENSLOCG00000005733) supt6h (ENSLOCG00000005760) ENSLOCG00000005777 zgc:174895 (ENSLOCG00000005790) rab34a (ENSLOCG00000005802) rpl23a (ENSLOCG00000005815) tlcd1 (ENSLOCG00000005834) nek8 (ENSLOCG00000005850) traf4a (ENSLOCG00000005871) tada2a (ENSLOCG00000005887) #22 dusp14 (ENSLOCG00000017439) SYNRG (ENSLOCG00000005903) #24 ddx52 (ENSLOCG00000005928) #25 HNF1B (ENSLOCG00000005942) #27 heatr6 (ENSLOCG00000005957) #28 dynll2a (ENSLOCG00000005981) srsf1a (ENSLOCG00000005994) pigs (ENSLOCG00000006015) aldoca (ENSLOCG00000006034) RSKR (ENSLOCG00000006050) BLTP2 (ENSLOCG00000006063) glod4 (ENSLOCG00000006096) ENSLOCG00000006115 ENSLOCG00000006137 slc47a2.1 (ENSLOCG00000006160) Osteoglossocephalai ANCESTRAL SPECIES 20 ENSGT00940000158885 ENSGT00510000047446 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT00940000166536 ENSGT00950000182901 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000168454 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00550000074863 #25 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.a ENSGT00390000016675 #28 ENSGT01100000263696 ENSGT00390000000378.d.b ENSGT00390000001618 ENSGT00390000000378.d.a.o.b ENSGT01100000264080 ENSGT00390000000378.d.a.p ENSGT00940000155585 ENSGT00390000017203 ENSGT00950000182987.c.a.b.b Osteoglossiformes ANCESTRAL SPECIES 163 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00390000000378.d.a.o.b ENSGT01100000264080 ENSGT00940000155585.c ENSGT00950000182987.c.a.b.b.r ENSGT00940000160082.a.b.f ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000161894.h ENSGT00390000012195 ENSGT00390000009714 ENSGT00940000164860.d.a ENSGT00940000177516.a ENSGT00940000163234.a.b.j Asian bonytongue MODERN SPECIES 1 DHRS11 (ENSSFOG00015005216) #14 flot2b (ENSSFOG00015031232) p2rx8 (ENSSFOG00015005289) ENSSFOG00015005323 ENSSFOG00015030073 ENSSFOG00015026414 ENSSFOG00015026917 ENSSFOG00015026204 ENSSFOG00015033292 ENSSFOG00015028358 KLHL6 (ENSSFOG00015004254) rab34a (ENSSFOG00015031200) tlcd1 (ENSSFOG00015029229) nek8 (ENSSFOG00015004426) traf4a (ENSSFOG00015004494) tada2a (ENSSFOG00015004545) #22 dusp14 (ENSSFOG00015004602) SYNRG (ENSSFOG00015004628) #24 hnf1ba (ENSSFOG00015004699) #27 dynll2a (ENSSFOG00015004769) ENSSFOG00015016483 SRSF1 (ENSSFOG00015004800) aldoca (ENSSFOG00015004811) ENSSFOG00015004837 BLTP2 (ENSSFOG00015004891) glod4 (ENSSFOG00015005026) ENSSFOG00015005059 txndc17 (ENSSFOG00015030360) ENSSFOG00015005093 PITPNM3 (ENSSFOG00015005111) ENSSFOG00015005152 P. kingsleyae MODERN SPECIES 164 chchd2 (ENSPKIG00000006219) ENSPKIG00000006238 ENSPKIG00000006263 ENSPKIG00000006343 ENSPKIG00000006376 sbds (ENSPKIG00000006489) ENSPKIG00000006512 tyw1 (ENSPKIG00000006545) CALN1 (ENSPKIG00000006593) GALNT17 (ENSPKIG00000006634) ENSPKIG00000006672 rab34a (ENSPKIG00000006695) tlcd1 (ENSPKIG00000006744) nek8 (ENSPKIG00000006771) traf4a (ENSPKIG00000006822) tada2a (ENSPKIG00000006873) #22 dusp14 (ENSPKIG00000006925) SYNRG (ENSPKIG00000007000) #24 hnf1ba (ENSPKIG00000007120) #27 ENSPKIG00000007168 ENSPKIG00000007183 SRSF1 (ENSPKIG00000007204) aldoca (ENSPKIG00000007245) BLTP2 (ENSPKIG00000007303) ENSPKIG00000007420 glod4 (ENSPKIG00000007451) NXN (ENSPKIG00000007485) txndc17 (ENSPKIG00000007514) ENSPKIG00000007566 ENSPKIG00000007673 ENSPKIG00000007779 Clupeocephala ANCESTRAL SPECIES 9 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT00950000182901 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000168454 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000264080 ENSGT00390000000378.d.a.o.b ENSGT00390000001618 ENSGT00390000000378.d.a.o.a ENSGT00940000155585.b ENSGT00940000164330 ENSGT00390000000378.d.a.p ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 Otomorpha ANCESTRAL SPECIES 2 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT00950000182901 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000168454 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000264080 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642.e ENSGT00390000017317 ENSGT00940000161894 ENSGT00390000012195 Otophysi ANCESTRAL SPECIES 53 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT01090000260061.c.a.c.a.b.d ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT00950000182901 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000168454 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000164330 ENSGT00950000182987.c.a.b.b ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642.e ENSGT00390000017317 ENSGT00940000161894 ENSGT00390000012195 ENSGT01020000230351.E.c ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a Characiphysae ANCESTRAL SPECIES 22 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT01090000261392 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000164330 ENSGT00950000182987.c.a.b.b ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00390000017317 ENSGT00940000161894 ENSGT00390000012195 ENSGT01020000230351.E.c ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00940000156014 Channel catfish MODERN SPECIES 8 ENSIPUG00000017700 ENSIPUG00000017691 ENSIPUG00000017668 diabloa (ENSIPUG00000017641) or94a1 (ENSIPUG00000017626) or95a1 (ENSIPUG00000017625) c2cd3 (ENSIPUG00000017538) YWHAG (ENSIPUG00000017530) ca4b (ENSIPUG00000017504) ENSIPUG00000017498 zgc:174895 (ENSIPUG00000017468) rab34a (ENSIPUG00000017447) TLCD1 (ENSIPUG00000017440) nek8 (ENSIPUG00000017396) traf4 (ENSIPUG00000017360) tada2a (ENSIPUG00000017328) #22 dusp14 (ENSIPUG00000017313) synrg (ENSIPUG00000017171) #24 hnf1b (ENSIPUG00000017093) #27 ENSIPUG00000017072 dynll2a (ENSIPUG00000017060) srsf1a (ENSIPUG00000017039) aldoca (ENSIPUG00000016952) ENSIPUG00000016935 BLTP2 (ENSIPUG00000016872) ENSIPUG00000016855 glod4 (ENSIPUG00000016803) mrm3 (ENSIPUG00000016782) nxn (ENSIPUG00000016761) txndc17 (ENSIPUG00000016742) p2rx8 (ENSIPUG00000016595) Characiphysae_b ANCESTRAL SPECIES 14 ENSGT01090000261392 ENSGT00940000154890.a.b ENSGT00980000199127.c ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT01090000260061.c.a.c.a.b.d ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000164330 ENSGT00950000182987.c.a.b.b ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00390000017317 ENSGT00940000161894 ENSGT00390000012195 ENSGT01020000230351.E.c ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00940000156014 Characoidei ANCESTRAL SPECIES 12 ENSGT00510000048072 ENSGT01090000261392 ENSGT00940000154890.a.b ENSGT00980000199127.c ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00390000017317 ENSGT00940000161894 ENSGT00390000012195 ENSGT01020000230351.E.c ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00940000156014 Red-bellied piranha MODERN SPECIES 560 dhrs11b.2 (ENSPNAG00000005136) #14 ENSPNAG00000014513 zgc:174895 (ENSPNAG00000003164) rab34a (ENSPNAG00000003179) TLCD1 (ENSPNAG00000014588) nek8 (ENSPNAG00000014617) traf4a (ENSPNAG00000003201) tada2a (ENSPNAG00000003229) #22 dusp14 (ENSPNAG00000007187) SYNRG (ENSPNAG00000014998) #24 hnf1ba (ENSPNAG00000006298) #27 Mexicana tetra MODERN SPECIES ENSAMXG00000003939 camkk1b (ENSAMXG00000003954) ENSAMXG00000038009 HSPB1 (ENSAMXG00000035295) YWHAG (ENSAMXG00000034020) ca4b (ENSAMXG00000003989) DHRS11 (ENSAMXG00000037800) #14 DHRS11 (ENSAMXG00000003995) #14 DHRS11 (ENSAMXG00000041118) #14 ENSAMXG00000003998 zgc:174895 (ENSAMXG00000004003) rab34a (ENSAMXG00000043003) TLCD1 (ENSAMXG00000041564) nek8 (ENSAMXG00000004017) traf4a (ENSAMXG00000033861) tada2a (ENSAMXG00000004036) #22 dusp14 (ENSAMXG00000025808) SYNRG (ENSAMXG00000004038) #24 hnf1ba (ENSAMXG00000004039) #27 dynll2a (ENSAMXG00000029047) ENSAMXG00000012944 srsf1a (ENSAMXG00000035996) aldoca (ENSAMXG00000004047) ENSAMXG00000032315 BLTP2 (ENSAMXG00000004053) ENSAMXG00000029951 glod4 (ENSAMXG00000004059) mrm3a (ENSAMXG00000030559) nxn (ENSAMXG00000032024) txndc17 (ENSAMXG00000041375) p2rx8 (ENSAMXG00000004084) Electric eel MODERN SPECIES 506 tada2a (ENSEEEG00000001504) #22 dusp14 (ENSEEEG00000001516) SYNRG (ENSEEEG00000001522) #24 hnf1ba (ENSEEEG00000001544) #27 ENSEEEG00000001605 ENSEEEG00000001608 aldoca (ENSEEEG00000001611) BLTP2 (ENSEEEG00000001620) glod4 (ENSEEEG00000001754) MRM3 (ENSEEEG00000001853) nxn (ENSEEEG00000001856) txndc17 (ENSEEEG00000001859) p2rx8 (ENSEEEG00000001863) FAM222B (ENSEEEG00000001875) flot2b (ENSEEEG00000001880) GALNT17 (ENSEEEG00000001883) Cyprinoidei ANCESTRAL SPECIES 4 ENSGT00940000158967 ENSGT00940000165734 ENSGT00940000163324 ENSGT00390000007237.r ENSGT00940000156028.s ENSGT00940000170905 ENSGT00390000006189 ENSGT00940000164885 ENSGT00510000048072 ENSGT00940000165122 ENSGT00940000159645.g ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000168454 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000164330 ENSGT00950000182987.c.a.b.b ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642.e ENSGT00940000161894 ENSGT00390000012195 ENSGT01020000230351.E.c ENSGT00530000063811.A.a.b ENSGT00560000077232.B.g.a ENSGT00940000156014 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 92 ENSGT00940000163324.w.a.b ENSGT00940000163324.w.b ENSGT00390000007237.r.b ENSGT00940000156028.s.b ENSGT00390000006189.g ENSGT00940000164885.e ENSGT00940000154890.a.b.a ENSGT01090000260061.c.a.c.a.a.a.j ENSGT00840000129887.g.a.i #14 ENSGT00840000129887.g.a.j.a #14 ENSGT00940000165341.d ENSGT00990000210122 ENSGT00940000159645.g.a ENSGT00940000168454 ENSGT00940000158628.o.b ENSGT00940000156751.k #22 ENSGT00940000164527.b.c ENSGT00390000010789.b #24 ENSGT00940000153818.a.b.a.b.u.a #27 ENSGT00940000164330.k ENSGT00950000182987.c.a.b.b.k ENSGT00600000084481.b ENSGT00940000179359 ENSGT00940000164902 ENSGT01030000235164 ENSGT00390000012195.d ENSGT00530000063811.A.a.b.b ENSGT00560000077232.B.g.a.g.b ENSGT00940000156014.a ENSGT00940000159212.a.j ENSGT00510000047059.d Goldfish MODERN SPECIES 34 P4HA3 (ENSCARG00000015556) ENSCARG00000015536 ENSCARG00000015531 diabloa (ENSCARG00000015525) ENSCARG00000015517 med29 (ENSCARG00000015506) C2CD3 (ENSCARG00000015499) camkk1b (ENSCARG00000015494) YWHAG (ENSCARG00000015490) dhrs11b.1 (ENSCARG00000015474) #14 dhrs11b.2 (ENSCARG00000015471) #14 ENSCARG00000015465 ENSCARG00000015463 rab34a (ENSCARG00000015446) traf4a (ENSCARG00000015430) tada2a (ENSCARG00000015245) #22 dusp14 (ENSCARG00000015212) SYNRG (ENSCARG00000013941) #24 hnf1ba (ENSCARG00000013869) #27 ENSCARG00000013867 dynll2a (ENSCARG00000013861) ENSCARG00000013851 ENSCARG00000013830 aldoca (ENSCARG00000013687) BLTP2 (ENSCARG00000013569) glod4 (ENSCARG00000013447) ENSCARG00000013440 nxn (ENSCARG00000013432) txndc17 (ENSCARG00000013423) FAM222B (ENSCARG00000013422) flot2b (ENSCARG00000012188) Cyprininae_a ANCESTRAL SPECIES 116 ENSGT00940000163324.w.a.b ENSGT00940000163324.w.b ENSGT00390000007237.r.b ENSGT00940000156028.s.b ENSGT00390000006189.g ENSGT00940000164885.e ENSGT00940000154890.a.b.a ENSGT01090000260061.c.a.c.a.a.a.j ENSGT00940000155690.b.b ENSGT00840000129887.g.a.i #14 ENSGT00840000129887.g.a.j.a.a #14 ENSGT00940000165341.d ENSGT00940000159645.g.a ENSGT00940000168454 ENSGT00940000158628.o.b ENSGT00940000156751.k #22 ENSGT00940000164527.b.c ENSGT00390000010789.b #24 ENSGT00940000153818.a.b.a.b.u.a #27 ENSGT00940000164330.k ENSGT00950000182987.c.a.b.b.k ENSGT00600000084481.b ENSGT00940000179359 ENSGT00940000164902 ENSGT01030000235164 ENSGT00390000012195.d ENSGT00530000063811.A.a.b.b ENSGT00560000077232.B.g.a.g.b ENSGT00940000156014.a ENSGT00940000159212.a.j ENSGT00510000047059.d Common carp reference MODERN SPECIES 39 ENSCCRG00000048858 ENSCCRG00000069699 ENSCCRG00000074383 diabloa (ENSCCRG00000055722) ENSCCRG00000075630 ENSCCRG00000033557 med29 (ENSCCRG00000054006) camkk1b (ENSCCRG00000075051) ENSCCRG00000076137 dhrs11b.1 (ENSCCRG00000081212) #14 dhrs11b.2 (ENSCCRG00000073608) #14 ENSCCRG00000073822 rab34a (ENSCCRG00000054425) ENSCCRG00000058819 traf4a (ENSCCRG00000069453) tada2a (ENSCCRG00000011998) #22 dusp14 (ENSCCRG00000068316) ENSCCRG00000011943 #24 hnf1ba (ENSCCRG00000011934) #27 ENSCCRG00000011979 ENSCCRG00000081858 aldoca (ENSCCRG00000011569) ENSCCRG00000008247 ENSCCRG00000011560 glod4 (ENSCCRG00000001395) ENSCCRG00000066934 ENSCCRG00000054926 txndc17 (ENSCCRG00000067596) ENSCCRG00000008195 flot2b (ENSCCRG00000050135) ENSCCRG00000076946 Golden-line barbel MODERN SPECIES 495 tada2a (ENSSGRG00000002891) #22 dusp14 (ENSSGRG00000002863) SYNRG (ENSSGRG00000002172) #24 hnf1ba (ENSSGRG00000001975) #27 ENSSGRG00000001967 ENSSGRG00000001966 dynll2a (ENSSGRG00000001927) srsf1a (ENSSGRG00000001916) ENSSGRG00000001915 ENSSGRG00000001914 ENSSGRG00000001913 BLTP2 (ENSSGRG00000001313) ENSSGRG00000046551 ENSSGRG00000046550 ENSSGRG00000046548 ENSSGRG00000046547 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 13 ENSGT00940000170905 ENSGT00390000006189.h ENSGT00940000164885.f ENSGT00510000048072 ENSGT01090000261392 ENSGT00940000154890.a.b.b ENSGT01090000260061.c.a.c.a.a.a.i ENSGT00940000155690.b.b ENSGT00840000129887.g.a.j.b #14 ENSGT00940000165341.c ENSGT00940000165122 ENSGT00940000159645.g.b ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000158628.o.a ENSGT00940000156751.l.a #22 ENSGT00940000156751.l.b #22 ENSGT00940000164527.b.d ENSGT00390000010789.a #24 ENSGT00940000153818.a.b.a.b.u.b #27 ENSGT01100000263854.a ENSGT00390000000378.d.a.o.b.i.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b.l ENSGT00940000160082.b ENSGT00940000177065 ENSGT00600000084481.a ENSGT00390000012340.i ENSGT00940000166642.e ENSGT00940000161894 ENSGT00390000012195.c Goldfish MODERN SPECIES 6 diabloa (ENSCARG00000051097) ENSCARG00000051167 RRP8 (ENSCARG00000051199) med29 (ENSCARG00000051217) ENSCARG00000051593 camkk1b (ENSCARG00000051638) YWHAG (ENSCARG00000052148) ca4b (ENSCARG00000052157) dhrs11b.2 (ENSCARG00000052167) #14 ENSCARG00000052194 zgc:174895 (ENSCARG00000052198) rab34a (ENSCARG00000052261) ENSCARG00000052431 nek8 (ENSCARG00000052469) traf4a (ENSCARG00000052636) tada2a (ENSCARG00000052707) #22 her13 (ENSCARG00000052796) her8.2 (ENSCARG00000052805) ENSCARG00000052814 ENSCARG00000052819 ankrd49 (ENSCARG00000052828) mre11a (ENSCARG00000052961) ENSCARG00000054784 ENSCARG00000054790 lpar6a (ENSCARG00000054797) ENSCARG00000054809 ENSCARG00000054817 ENSCARG00000054823 ENSCARG00000054903 LHFPL1 (ENSCARG00000054909) ENSCARG00000054929 Cyprininae_a ANCESTRAL SPECIES 27 ENSGT00940000156028.s.a ENSGT00940000170905 ENSGT00390000006189.h ENSGT00940000164885.f ENSGT00510000048072 ENSGT01090000261392 ENSGT00940000154890.a.b.b ENSGT01090000260061.c.a.c.a.a.a.i ENSGT00840000129887.g.a.j.b #14 ENSGT00940000165341.c ENSGT00940000165122 ENSGT00940000159645.g.b ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000158628.o.a ENSGT00940000156751.l.a #22 ENSGT00940000156751.l.b #22 ENSGT00940000164527.b.d ENSGT00390000010789.a #24 ENSGT00940000153818.a.b.a.b.u.b #27 ENSGT01100000263854.a.a ENSGT00390000000378.d.a.o.b.i.b ENSGT00940000160082.b ENSGT00600000084481.a ENSGT00390000012340.i ENSGT00940000166642.e ENSGT00940000161894 ENSGT00940000165363 ENSGT00390000012195.c ENSGT01020000230351.E.c ENSGT00530000063811.A.a.b.a Common carp reference MODERN SPECIES 26 ENSCCRG00000033553 ENSCCRG00000044090 med29 (ENSCCRG00000075060) ENSCCRG00000066210 ENSCCRG00000064739 camkk1b (ENSCCRG00000033584) ENSCCRG00000066458 ca4b (ENSCCRG00000033589) dhrs11b.2 (ENSCCRG00000056327) #14 dhrs11b.2 (ENSCCRG00000033626) #14 ENSCCRG00000033574 zgc:174895 (ENSCCRG00000066425) rab34a (ENSCCRG00000033632) nek8 (ENSCCRG00000033641) traf4a (ENSCCRG00000073394) tada2a (ENSCCRG00000056430) #22 dusp14 (ENSCCRG00000055314) ENSCCRG00000002208 #24 hnf1ba (ENSCCRG00000025630) #27 dynll2a (ENSCCRG00000075644) ENSCCRG00000078088 srsf1a (ENSCCRG00000008218) ENSCCRG00000071659 ENSCCRG00000021523 glod4 (ENSCCRG00000021537) mrm3a (ENSCCRG00000061759) nxn (ENSCCRG00000008207) txndc17 (ENSCCRG00000058973) p2rx8 (ENSCCRG00000006836) ENSCCRG00000074697 flot2b (ENSCCRG00000054407) Golden-line barbel MODERN SPECIES 5192 ENSSGRG00000004356 #22 Cyprininae ANCESTRAL SPECIES 13 ENSGT00390000006189.h ENSGT00940000164885.f ENSGT00510000048072 ENSGT01090000261392 ENSGT00940000154890.a.b.b ENSGT01090000260061.c.a.c.a.a.a.i ENSGT00940000155690.b.b ENSGT00840000129887.g.a.j.b #14 ENSGT00940000165341.c ENSGT00940000165122 ENSGT00940000159645.g.b ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000158628.o.a ENSGT00940000156751.l.a #22 ENSGT00940000156751.l.b #22 ENSGT00940000164527.b.d ENSGT00390000010789.a #24 ENSGT00940000153818.a.b.a.b.u.b #27 ENSGT01100000263854.a ENSGT00390000000378.d.a.o.b.i.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b.l ENSGT00940000160082.b ENSGT00940000177065 ENSGT00600000084481.a ENSGT00390000012340.i ENSGT00940000166642.e ENSGT00940000161894 ENSGT00390000012195.c ENSGT01020000230351.E.c Cyprininae_a ANCESTRAL SPECIES 27 ENSGT00940000170905 ENSGT00390000006189.h ENSGT00940000164885.f ENSGT00510000048072 ENSGT01090000261392 ENSGT00940000154890.a.b.b ENSGT01090000260061.c.a.c.a.a.a.i ENSGT00840000129887.g.a.j.b #14 ENSGT00940000165341.c ENSGT00940000165122 ENSGT00940000159645.g.b ENSGT00940000159297 ENSGT00960000189469 ENSGT00940000158628.o.a ENSGT00940000156751.l.a #22 ENSGT00940000156751.l.b #22 ENSGT00940000164527.b.d ENSGT00390000010789.a #24 ENSGT00940000153818.a.b.a.b.u.b #27 ENSGT01100000263854.a.a ENSGT00390000000378.d.a.o.b.i.b ENSGT00940000160082.b ENSGT00600000084481.a ENSGT00390000012340.i ENSGT00940000166642.e ENSGT00940000161894 ENSGT00940000165363 ENSGT00390000012195.c ENSGT01020000230351.E.c ENSGT00530000063811.A.a.b.a ENSGT00560000077232.B.g.a.g.a Golden-line barbel MODERN SPECIES 45 ENSSGRG00000016495 diabloa (ENSSGRG00000016494) ENSSGRG00000016492 ENSSGRG00000016488 med29 (ENSSGRG00000016487) camkk1b (ENSSGRG00000016401) YWHAG (ENSSGRG00000016384) ENSSGRG00000016377 #14 dhrs11b.2 (ENSSGRG00000016365) #14 ENSSGRG00000016364 RAB34 (ENSSGRG00000016363) nek8 (ENSSGRG00000016361) ENSSGRG00000016355 traf4a (ENSSGRG00000016353) tada2a (ENSSGRG00000016159) #22 dusp14 (ENSSGRG00000016153) ENSSGRG00000015321 #24 hnf1ba (ENSSGRG00000015240) #27 ENSSGRG00000015238 dynll2a (ENSSGRG00000015217) srsf1a (ENSSGRG00000015214) aldoca (ENSSGRG00000015119) BLTP2 (ENSSGRG00000015097) glod4 (ENSSGRG00000015045) mrm3a (ENSSGRG00000015044) ENSSGRG00000015043 txndc17 (ENSSGRG00000015037) p2rx8 (ENSSGRG00000015035) FAM222B (ENSSGRG00000015033) flot2b (ENSSGRG00000015025) Zebrafish MODERN SPECIES 6 med29 (ENSDARG00000026448) ENSDARG00000074137 camkk1b (ENSDARG00000015134) YWHAG (ENSDARG00000071658) ENSDARG00000090126 ca4b (ENSDARG00000042293) dhrs11b.1 (ENSDARG00000031299) #14 dhrs11b.2 (ENSDARG00000004141) #14 ENSDARG00000069823 zgc:174895 (ENSDARG00000079416) rab34a (ENSDARG00000045628) nek8 (ENSDARG00000045626) traf4a (ENSDARG00000003963) ENSDARG00000097793 ENSDARG00000097340 tada2a (ENSDARG00000031562) #22 dusp14 (ENSDARG00000057625) SYNRG (ENSDARG00000073926) #24 hnf1ba (ENSDARG00000006615) #27 dynll2a (ENSDARG00000069790) srsf1a (ENSDARG00000057691) aldoca (ENSDARG00000057661) ENSDARG00000087176 BLTP2 (ENSDARG00000030945) glod4 (ENSDARG00000042509) mrm3a (ENSDARG00000016543) nxn (ENSDARG00000033978) txndc17 (ENSDARG00000058079) p2rx8 (ENSDARG00000024139) FAM222B (ENSDARG00000078578) flot2b (ENSDARG00000069774) Clupeiformes ANCESTRAL SPECIES 225 ENSGT00390000007237.r ENSGT00940000163324.k.b ENSGT00940000163324.k.a ENSGT00940000163324.l ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT01030000234556.a.a.a.a ENSGT01030000234556.a.a.b ENSGT00730000111265 ENSGT00940000158516 ENSGT00940000156392.a ENSGT00940000160922 ENSGT00940000164285.b Atlantic herring MODERN SPECIES 25 cuedc1b (ENSCHAG00000027778) ENSCHAG00000027777 MINDY4B (ENSCHAG00000027776) LGALS4 (ENSCHAG00000027774) ryr1b (ENSCHAG00000027560) rasgrp4 (ENSCHAG00000027444) opa3 (ENSCHAG00000027439) ppp1r13l (ENSCHAG00000027438) TMEM91 (ENSCHAG00000027435) exosc5 (ENSCHAG00000027431) bckdha (ENSCHAG00000027422) ENSCHAG00000027417 cfap45 (ENSCHAG00000027404) tbrg1 (ENSCHAG00000027392) siae (ENSCHAG00000027385) tada2a (ENSCHAG00000027311) #22 dusp14 (ENSCHAG00000027289) SYNRG (ENSCHAG00000027269) #24 hnf1ba (ENSCHAG00000027245) #27 ENSCHAG00000027243 dynll2a (ENSCHAG00000027241) ENSCHAG00000027238 ENSCHAG00000027235 gap43 (ENSCHAG00000027231) LSAMP (ENSCHAG00000027228) ENSCHAG00000027224 igsf11 (ENSCHAG00000027220) lrfn1 (ENSCHAG00000027211) socs9 (ENSCHAG00000027207) aldh3a2a (ENSCHAG00000027187) ENSCHAG00000027156 Denticle herring MODERN SPECIES 4 ENSDCDG00000004147 ENSDCDG00000004150 ENSDCDG00000004151 ENSDCDG00000004156 ENSDCDG00000004160 camkk1b (ENSDCDG00000004181) YWHAG (ENSDCDG00000004302) ENSDCDG00000004306 dhrs11b.2 (ENSDCDG00000004318) #14 ENSDCDG00000004330 zgc:174895 (ENSDCDG00000004337) rab34a (ENSDCDG00000004340) tlcd1 (ENSDCDG00000004342) nek8 (ENSDCDG00000004344) traf4a (ENSDCDG00000004355) tada2a (ENSDCDG00000004378) #22 dusp14 (ENSDCDG00000004431) SYNRG (ENSDCDG00000004442) #24 hnf1ba (ENSDCDG00000004512) #27 dynll2a (ENSDCDG00000004516) MPZL2 (ENSDCDG00000004519) ENSDCDG00000004524 gap43 (ENSDCDG00000004526) ENSDCDG00000004531 hnf1ba (ENSDCDG00000004535) #27 dynll2a (ENSDCDG00000004542) ENSDCDG00000004546 MPZL2 (ENSDCDG00000004548) ENSDCDG00000004554 gap43 (ENSDCDG00000004558) LSAMP (ENSDCDG00000004561) Euteleosteomorpha ANCESTRAL SPECIES 7 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000264080 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 Protacanthopterygii ANCESTRAL SPECIES 15 ENSGT00940000181974 ENSGT00940000163324 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT01000000215988.b ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000159645.d ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000001618.r.b ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00390000017317 ENSGT00940000161894 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 96 ENSGT00940000156751.m #22 ENSGT00390000010789.c #24 ENSGT00940000153818.a.b.a.b.i #27 ENSGT00390000001618.r.b ENSGT00390000000378.d.a.o.b.e.a ENSGT00940000155585.a.d ENSGT00950000182987.c.a.b.b.o.b ENSGT00940000160082.a.a.a ENSGT00940000177065 ENSGT00940000160082.b ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340.g.b ENSGT00960000191650 ENSGT00940000164902 ENSGT00940000161894.d Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000165592.a.b ENSGT00950000183012.B.a.h ENSGT01000000215988.b ENSGT00940000154890.a.b.c ENSGT01090000260061.c.a.c.a.a.a.h ENSGT00940000155690.b.b.f ENSGT00840000129887.g.a.a.a #14 ENSGT00510000047446.n.a ENSGT00940000165341.a ENSGT00940000165122.a.a ENSGT00940000165122.b ENSGT00940000159645.c.a ENSGT01010000222313.B.a.l ENSGT00940000159297.b ENSGT00940000158628.k ENSGT00940000156751.m #22 ENSGT00940000164527.b.e ENSGT00390000010789.c #24 ENSGT00940000153818.a.b.a.b.i #27 ENSGT01000000216432.b ENSGT00390000000378.d.a.o.b.e.a ENSGT00940000155585.a.d ENSGT00950000182987.c.a.b.b.o.b ENSGT00940000160082.a.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340.g.b ENSGT00960000191650 ENSGT00940000164902 ENSGT00940000161894.d Salmo ANCESTRAL SPECIES 22 ENSGT00940000163324.g.a ENSGT00940000165592.a.b ENSGT00950000183012.B.a.h ENSGT00940000154890.a.b.c ENSGT01090000260061.c.a.c.a.a.a.h ENSGT00940000155690.b.b.f ENSGT00940000177105 ENSGT00510000047446.n.a ENSGT00940000165341.a ENSGT00940000165122.a.a ENSGT00940000159645.c.a ENSGT00940000159645.d ENSGT01010000222313.B.a.l ENSGT00940000159297.b ENSGT00940000158628.k ENSGT00940000156751.m #22 ENSGT00940000164527.b.e ENSGT00390000010789.c #24 ENSGT00940000153818.a.b.a.b.i #27 ENSGT01000000216432.b ENSGT00390000000378.d.a.o.b.e.a ENSGT00940000155585.a.d ENSGT00950000182987.c.a.b.b.o.b ENSGT00940000160082.a.a.a ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340.g.b ENSGT00960000191650 ENSGT00940000164902 ENSGT00940000161894.d ENSGT00390000012195.f River trout MODERN SPECIES 4 diabloa (ENSSTUG00000033584) ENSSTUG00000033591 ENSSTUG00000033622 ENSSTUG00000033631 camkk1b (ENSSTUG00000033635) YWHAG (ENSSTUG00000033678) ca4b (ENSSTUG00000033688) ENSSTUG00000033741 SUPT6H (ENSSTUG00000033839) ENSSTUG00000035185 zgc:174895 (ENSSTUG00000035196) rab34a (ENSSTUG00000035216) tlcd1 (ENSSTUG00000035284) nek8 (ENSSTUG00000035295) traf4a (ENSSTUG00000035352) tada2a (ENSSTUG00000035431) #22 dusp14 (ENSSTUG00000035634) ENSSTUG00000035647 #24 hnf1ba (ENSSTUG00000035911) #27 ENSSTUG00000035973 dynll2a (ENSSTUG00000035979) srsf1a (ENSSTUG00000035990) aldoca (ENSSTUG00000036003) RSKR (ENSSTUG00000036077) BLTP2 (ENSSTUG00000036117) ENSSTUG00000036718 glod4 (ENSSTUG00000036728) ENSSTUG00000036860 nxn (ENSSTUG00000036870) txndc17 (ENSSTUG00000036906) ENSSTUG00000036921 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000038676 ENSSSAG00000109715 ENSSSAG00000038798 ENSSSAG00000113891 ENSSSAG00000094385 ENSSSAG00000039794 ENSSSAG00000039857 SUPT6H (ENSSSAG00000040017) ENSSSAG00000085755 zgc:174895 (ENSSSAG00000107605) rab34a (ENSSSAG00000110634) ENSSSAG00000120435 ENSSSAG00000089256 nek8 (ENSSSAG00000045418) traf4 (ENSSSAG00000045610) tada2a (ENSSSAG00000045649) #22 ENSSSAG00000086703 dusp14 (ENSSSAG00000085214) hnf1ba (ENSSSAG00000046551) #27 ENSSSAG00000046749 dynll2a (ENSSSAG00000046760) srsf1a (ENSSSAG00000046779) aldoca (ENSSSAG00000046798) ENSSSAG00000046849 ENSSSAG00000046890 glod4 (ENSSSAG00000049925) ENSSSAG00000050006 nxn (ENSSSAG00000050026) txndc17 (ENSSSAG00000083092) ENSSSAG00000050071 ENSSSAG00000097605 Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00940000158967.q ENSGT00940000165592.a.b ENSGT00950000183012.B.a.h ENSGT01000000215988.b ENSGT00940000154890.a.b.c ENSGT01090000260061.c.a.c.a.a.a.h ENSGT00940000155690.b.b.f ENSGT00840000129887.g.a.a.a #14 ENSGT00510000047446.n.a ENSGT00940000165341.a ENSGT00940000165122.b ENSGT00940000159645.c.a ENSGT01010000222313.B.a.l ENSGT00940000168454 ENSGT00940000158628.k ENSGT00940000156751.m #22 ENSGT00940000164527.b.e ENSGT00390000010789.c #24 ENSGT00940000153818.a.b.a.b.i #27 ENSGT01000000216432.b ENSGT00390000000378.d.a.o.b.e.a ENSGT00940000155585.a.d ENSGT00950000182987.c.a.b.b.o.b ENSGT00940000160082.a.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340.g.b ENSGT00960000191650 ENSGT00940000161894.d ENSGT00390000012195.f ENSGT00390000009714.m.a Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00940000163324.g.b ENSGT00940000158967.q ENSGT00940000165592.a.b ENSGT00950000183012.B.a.h ENSGT01000000215988.b ENSGT00940000154890.a.b.c ENSGT01090000260061.c.a.c.a.a.a.h ENSGT00940000155690.b.b.f ENSGT00840000129887.g.a.a.a #14 ENSGT00510000047446.n.a ENSGT00940000165341.a ENSGT00940000165122.b ENSGT00940000159645.c.a ENSGT01010000222313.B.a.l ENSGT00940000158628.k ENSGT00940000156751.m #22 ENSGT00940000164527.b.e ENSGT00390000010789.c #24 ENSGT00940000153818.a.b.a.b.i #27 ENSGT01000000216432.b ENSGT00390000000378.d.a.o.b.e.a ENSGT00940000155585.a.d ENSGT00950000182987.c.a.b.b.o.b ENSGT00940000160082.a.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340.g.b ENSGT00960000191650 ENSGT00940000161894.d ENSGT00390000012195.f ENSGT00390000009714.m.a Chinook salmon MODERN SPECIES 5 ENSOTSG00005008336 ENSOTSG00005008339 P4HA3 (ENSOTSG00005008343) ENSOTSG00005008351 ENSOTSG00005008353 camkk1b (ENSOTSG00005008367) YWHAG (ENSOTSG00005009305) ca4b (ENSOTSG00005009307) ENSOTSG00005009308 #14 SUPT6H (ENSOTSG00005009309) ENSOTSG00005009312 zgc:174895 (ENSOTSG00005009313) rab34a (ENSOTSG00005009314) tlcd1 (ENSOTSG00005009408) traf4a (ENSOTSG00005009409) tada2a (ENSOTSG00005002068) #22 dusp14 (ENSOTSG00005002287) SYNRG (ENSOTSG00005002314) #24 hnf1ba (ENSOTSG00005002391) #27 ENSOTSG00005002424 dynll2a (ENSOTSG00005002430) srsf1a (ENSOTSG00005002433) aldoca (ENSOTSG00005002437) RSKR (ENSOTSG00005002444) BLTP2 (ENSOTSG00005002450) glod4 (ENSOTSG00005002678) ENSOTSG00005002757 nxn (ENSOTSG00005002764) txndc17 (ENSOTSG00005002780) ENSOTSG00005002782 ENSOTSG00005002787 Coho salmon MODERN SPECIES 9 ENSOKIG00005027728 or95a1 (ENSOKIG00005027721) ENSOKIG00005027697 P4HA3 (ENSOKIG00005027657) ENSOKIG00005027640 CAMKK1 (ENSOKIG00005027392) YWHAG (ENSOKIG00005027365) ENSOKIG00005027311 ENSOKIG00005027243 SUPT6H (ENSOKIG00005026519) ENSOKIG00005026480 ENSOKIG00005026442 rab34a (ENSOKIG00005026222) tlcd1 (ENSOKIG00005026210) traf4a (ENSOKIG00005026197) tada2a (ENSOKIG00005025705) #22 dusp14 (ENSOKIG00005025654) SYNRG (ENSOKIG00005025548) #24 hnf1ba (ENSOKIG00005025503) #27 dynll2a (ENSOKIG00005025486) ENSOKIG00005025470 srsf1a (ENSOKIG00005025452) aldoca (ENSOKIG00005025431) RSKR (ENSOKIG00005025421) ENSOKIG00005025391 BLTP2 (ENSOKIG00005024862) glod4 (ENSOKIG00005024699) ENSOKIG00005024668 nxn (ENSOKIG00005024574) txndc17 (ENSOKIG00005024557) ENSOKIG00005024545 Rainbow trout MODERN SPECIES 16 ENSOMYG00000014445 ENSOMYG00000073085 ENSOMYG00000014494 ENSOMYG00000014511 ENSOMYG00000049664 ENSOMYG00000014557 ca4 (ENSOMYG00000014583) SUPT6H (ENSOMYG00000014654) ENSOMYG00000015009 ENSOMYG00000015029 RAB34 (ENSOMYG00000015063) TLCD1 (ENSOMYG00000015202) ENSOMYG00000075267 ENSOMYG00000057123 traf4a (ENSOMYG00000015225) tada2a (ENSOMYG00000015392) #22 dusp14 (ENSOMYG00000016031) ENSOMYG00000016070 #24 hnf1ba (ENSOMYG00000016172) #27 ENSOMYG00000016257 dynll2a (ENSOMYG00000016273) srsf1a (ENSOMYG00000016293) aldoca (ENSOMYG00000016308) ENSOMYG00000016414 ENSOMYG00000016486 glod4 (ENSOMYG00000016655) nxn (ENSOMYG00000016722) txndc17 (ENSOMYG00000016823) ENSOMYG00000016849 ENSOMYG00000066337 ENSOMYG00000016874 Huchen MODERN SPECIES 515 tada2a (ENSHHUG00000022134) #22 dusp14 (ENSHHUG00000022239) SYNRG (ENSHHUG00000022245) #24 hnf1ba (ENSHHUG00000022330) #27 ENSHHUG00000022383 dynll2a (ENSHHUG00000022384) srsf1a (ENSHHUG00000022408) ENSHHUG00000022441 aldoca (ENSHHUG00000022442) ENSHHUG00000022475 ENSHHUG00000022470 glod4 (ENSHHUG00000022512) ENSHHUG00000022545 nxn (ENSHHUG00000022568) txndc17 (ENSHHUG00000022588) ENSHHUG00000022613 Salmoninae ANCESTRAL SPECIES 351 ENSGT00940000158967.r ENSGT00510000048072 ENSGT00940000165592.a.a ENSGT00940000154890.a.b.d ENSGT01090000260061.c.a.c.a.a.a.g ENSGT00950000183203.d.c ENSGT00940000155690.b.b.e ENSGT00840000129887.g.a.a.b #14 ENSGT00510000047446.n.b ENSGT00940000165341.b ENSGT00940000165122.a.b ENSGT00940000159645.c.b ENSGT01010000222313.B.a.k ENSGT00940000159297.a ENSGT00940000158628.l ENSGT00940000156751.n #22 ENSGT00940000164527.b ENSGT00390000010789.d #24 ENSGT00940000153818.a.b.a.b.j #27 ENSGT00390000000378.d.a.o.b.e.b ENSGT00940000155585.a.c ENSGT00950000182987.c.a.b.b.o.a ENSGT00940000160082.a.a.b ENSGT00390000012340.g.a ENSGT00390000017317 ENSGT00940000161894.c ENSGT00390000012195.e Salmoninae_a ANCESTRAL SPECIES 19 ENSGT00940000165734.o ENSGT00940000158967.r ENSGT00510000048072 ENSGT00940000165592.a.a ENSGT00940000154890.a.b.d ENSGT01090000260061.c.a.c.a.a.a.g ENSGT00940000155690.b.b.e ENSGT00840000129887.g.a.a.b #14 ENSGT00510000047446.n.b ENSGT00940000165341.b ENSGT00940000165122.a.b ENSGT00940000159645.c.b ENSGT01010000222313.B.a.k ENSGT00940000159297.a ENSGT00940000158628.l ENSGT00940000156751.n #22 ENSGT00940000164527.b.f ENSGT00390000010789.d #24 ENSGT00940000153818.a.b.a.b.j #27 ENSGT00390000000378.d.a.o.b.e.b ENSGT01000000216432.a ENSGT00940000155585.a.c ENSGT00950000182987.c.a.b.b.o.a ENSGT00940000160082.a.a.b ENSGT00390000012340.g.a ENSGT00390000017317 ENSGT00940000161894.c ENSGT00390000012195.e ENSGT00390000009714.m.b ENSGT00940000164860.d.a.a ENSGT00940000153849.b.d Salmo ANCESTRAL SPECIES 7 ENSGT00940000158967.r ENSGT00510000048072 ENSGT00940000165592.a.a ENSGT00940000154890.a.b.d ENSGT00990000212790 ENSGT01090000260061.c.a.c.a.a.a.g ENSGT00940000155690.b.b.e ENSGT00840000129887.g.a.b #14 ENSGT00510000047446.n.b ENSGT00940000165341.b ENSGT00940000165122.a.b ENSGT00940000159645.c.b ENSGT01010000222313.B.a.k ENSGT00940000159297.a ENSGT00940000158628.l ENSGT00940000156751.n #22 ENSGT00940000164527.b.f ENSGT00390000010789.d #24 ENSGT00940000153818.a.b.a.b.j #27 ENSGT00390000000378.d.a.o.b.e.b ENSGT01000000216432.a ENSGT00940000155585.a.c ENSGT00950000182987.c.a.b.b.o.a ENSGT00940000160082.a.a.b ENSGT00390000012340.g.a ENSGT00940000166642 ENSGT00940000161894.c ENSGT00390000012195.e ENSGT00390000009714.m.b ENSGT00940000164860.d.a.a ENSGT00940000163922.b.e River trout MODERN SPECIES 18 P4HA3 (ENSSTUG00000048029) C2CD3 (ENSSTUG00000048090) ENSSTUG00000048114 camkk1b (ENSSTUG00000048126) ENSSTUG00000048153 YWHAG (ENSSTUG00000048160) ca4b (ENSSTUG00000048164) dhrs11b.2 (ENSSTUG00000048172) #14 SUPT6H (ENSSTUG00000048181) ENSSTUG00000048289 ENSSTUG00000048293 rab34a (ENSSTUG00000048307) tlcd1 (ENSSTUG00000048346) nek8 (ENSSTUG00000048375) traf4a (ENSSTUG00000048413) tada2a (ENSSTUG00000048440) #22 cox17 (ENSSTUG00000048666) dusp14 (ENSSTUG00000048667) ENSSTUG00000048675 #24 hnf1ba (ENSSTUG00000048716) #27 dynll2a (ENSSTUG00000048750) ENSSTUG00000048754 srsf1a (ENSSTUG00000048758) aldoca (ENSSTUG00000048760) RSKR (ENSSTUG00000048767) glod4 (ENSSTUG00000048773) mrm3a (ENSSTUG00000048795) nxn (ENSSTUG00000048800) txndc17 (ENSSTUG00000048813) ENSSTUG00000048816 ENSSTUG00000048844 Atlantic salmon MODERN SPECIES 12 p4ha3 (ENSSSAG00000072479) ENSSSAG00000072486 ENSSSAG00000116667 ENSSSAG00000072498 ENSSSAG00000072659 143g2 (ENSSSAG00000072660) ENSSSAG00000072662 SUPT6H (ENSSSAG00000072676) ENSSSAG00000072795 zgc:174895 (ENSSSAG00000072797) rab34a (ENSSSAG00000087295) TLCD1 (ENSSSAG00000117273) nek8 (ENSSSAG00000072815) ENSSSAG00000086068 traf4a (ENSSSAG00000073173) tada2a (ENSSSAG00000073189) #22 dusp14 (ENSSSAG00000093884) ENSSSAG00000046269 #24 hnf1ba (ENSSSAG00000046470) #27 dynll2a (ENSSSAG00000046544) ENSSSAG00000046567 sfrs1 (ENSSSAG00000046577) ALDOC (ENSSSAG00000046596) ENSSSAG00000101932 GLOD4 (ENSSSAG00000046659) ENSSSAG00000046710 nxn (ENSSSAG00000046721) TXD17 (ENSSSAG00000046767) ENSSSAG00000084377 pitpnm3 (ENSSSAG00000046823) slc47a4 (ENSSSAG00000050134) Oncorhynchus ANCESTRAL SPECIES 24 ENSGT00940000165734.o ENSGT00940000158967.r ENSGT00510000048072 ENSGT00940000165592.a.a ENSGT00940000154890.a.b.d ENSGT01090000260061.c.a.c.a.a.a.g ENSGT00940000155690.b.b.e ENSGT00840000129887.g.a.a.b #14 ENSGT00510000047446.n.b ENSGT00940000165341.b ENSGT00990000210122.a ENSGT00940000159645.c.b ENSGT01010000222313.B.a.k ENSGT00940000159297.a ENSGT00940000158628.l ENSGT00940000156751.n #22 ENSGT00940000164527.b.f ENSGT00390000010789.d #24 ENSGT00940000153818.a.b.a.b.j #27 ENSGT00390000000378.d.a.o.b.e.b ENSGT01000000216432.a ENSGT00940000155585.a.c ENSGT00950000182987.c.a.b.b.o.a ENSGT00940000160082.a.a.b ENSGT00390000012340.g.a ENSGT00390000017317 ENSGT00940000161894.c ENSGT00390000012195.e ENSGT00940000153849.b.d ENSGT00940000163922.b.e ENSGT00940000163234.a.a.e Oncorhynchus_a ANCESTRAL SPECIES 25 ENSGT00940000165734.o ENSGT00940000158967.r ENSGT00510000048072 ENSGT00940000165592.a.a ENSGT00940000154890.a.b.d ENSGT01090000260061.c.a.c.a.a.a.g ENSGT00940000155690.b.b.e ENSGT00840000129887.g.a.a.b #14 ENSGT00510000047446.n.b ENSGT00940000165341.b ENSGT00990000210122.a ENSGT00940000159645.c.b ENSGT01010000222313.B.a.k ENSGT00940000159297.a ENSGT00940000158628.l ENSGT00940000156751.n #22 ENSGT00940000164527.b.f ENSGT00390000010789.d #24 ENSGT00940000153818.a.b.a.b.j #27 ENSGT00390000000378.d.a.o.b.e.b ENSGT01000000216432.a ENSGT00940000155585.a.c ENSGT00950000182987.c.a.b.b.o.a ENSGT00390000012340.g.a ENSGT00390000017317 ENSGT00940000161894.c ENSGT00940000165363 ENSGT00390000012195.e ENSGT00940000153849.b.d ENSGT00940000163922.b.e ENSGT00940000163234.a.a.e Coho salmon MODERN SPECIES 6 P4HA3 (ENSOKIG00005039715) ENSOKIG00005039937 ENSOKIG00005039984 camkk1b (ENSOKIG00005040067) YWHAG (ENSOKIG00005040588) ca4b (ENSOKIG00005040613) dhrs11b.1 (ENSOKIG00005040633) #14 SUPT6H (ENSOKIG00005040793) ENSOKIG00005042025 ENSOKIG00005042032 ENSOKIG00005042049 rab34a (ENSOKIG00005042111) TLCD1 (ENSOKIG00005042266) nek8 (ENSOKIG00005042310) traf4a (ENSOKIG00005042391) tada2a (ENSOKIG00005042558) #22 ENSOKIG00005042979 dusp14 (ENSOKIG00005043006) SYNRG (ENSOKIG00005043039) #24 ENSOKIG00005043156 hnf1ba (ENSOKIG00005043174) #27 dynll2a (ENSOKIG00005043335) ENSOKIG00005043364 srsf1a (ENSOKIG00005043383) aldoca (ENSOKIG00005043440) glod4 (ENSOKIG00005043473) MRM3 (ENSOKIG00005043538) nxn (ENSOKIG00005043551) txndc17 (ENSOKIG00005043580) PITPNM3 (ENSOKIG00005043713) slc47a4 (ENSOKIG00005044146) Chinook salmon MODERN SPECIES 4 P4HA3 (ENSOTSG00005010112) ENSOTSG00005010415 ENSOTSG00005010416 camkk1b (ENSOTSG00005010417) YWHAG (ENSOTSG00005010542) ca4b (ENSOTSG00005033181) ENSOTSG00005033188 #14 SUPT6H (ENSOTSG00005033222) ENSOTSG00005033314 ENSOTSG00005033316 rab34a (ENSOTSG00005033317) tlcd1 (ENSOTSG00005033335) nek8 (ENSOTSG00005033339) traf4a (ENSOTSG00005033354) ENSOTSG00005033373 tada2a (ENSOTSG00005033374) #22 dusp14 (ENSOTSG00005033631) ENSOTSG00005033632 #24 hnf1ba (ENSOTSG00005033645) #27 dynll2a (ENSOTSG00005033647) ENSOTSG00005033648 srsf1a (ENSOTSG00005033649) aldoca (ENSOTSG00005033650) glod4 (ENSOTSG00005033652) ENSOTSG00005033654 MRM3 (ENSOTSG00005033655) ENSOTSG00005033660 txndc17 (ENSOTSG00005033712) slc47a4 (ENSOTSG00005033716) ENSOTSG00005033754 SLC13A5 (ENSOTSG00005033773) Rainbow trout MODERN SPECIES 19 ENSOMYG00000039056 ENSOMYG00000039147 ENSOMYG00000039222 ENSOMYG00000039292 ENSOMYG00000074588 ywhag2 (ENSOMYG00000039391) ENSOMYG00000039410 dhrs11b.1 (ENSOMYG00000039424) #14 SUPT6H (ENSOMYG00000039596) ENSOMYG00000039762 ENSOMYG00000039774 rab34a (ENSOMYG00000039806) TLCD1 (ENSOMYG00000039827) nek8 (ENSOMYG00000039894) traf4a (ENSOMYG00000050291) tada2a (ENSOMYG00000040056) #22 ENSOMYG00000040090 dusp14 (ENSOMYG00000040098) ENSOMYG00000040207 #24 hnf1ba (ENSOMYG00000040263) #27 dynll2a (ENSOMYG00000040309) ENSOMYG00000040321 srsf1a (ENSOMYG00000040327) aldoca (ENSOMYG00000040349) ENSOMYG00000040381 glod4 (ENSOMYG00000040399) ENSOMYG00000040411 nxn (ENSOMYG00000040432) txndc17 (ENSOMYG00000040448) ENSOMYG00000040479 slc47a4 (ENSOMYG00000040582) Huchen MODERN SPECIES 763 C2CD3 (ENSHHUG00000018304) ENSHHUG00000018342 camkk1b (ENSHHUG00000018355) ENSHHUG00000018366 YWHAG (ENSHHUG00000018369) ENSHHUG00000018401 ca4b (ENSHHUG00000018411) ENSHHUG00000018421 #14 SUPT6H (ENSHHUG00000018453) ENSHHUG00000018578 zgc:174895 (ENSHHUG00000018582) rab34a (ENSHHUG00000018587) tlcd1 (ENSHHUG00000018625) nek8 (ENSHHUG00000018628) traf4a (ENSHHUG00000018707) tada2a (ENSHHUG00000018733) #22 dusp14 (ENSHHUG00000018769) ENSHHUG00000018774 #24 hnf1ba (ENSHHUG00000018938) #27 ENSHHUG00000018969 dynll2a (ENSHHUG00000018980) srsf1a (ENSHHUG00000019089) aldoca (ENSHHUG00000019126) Northern pike MODERN SPECIES ENSELUG00000031616 P4HA3 (ENSELUG00000022448) ENSELUG00000000958 ENSELUG00000022420 ENSELUG00000022398 camkk1b (ENSELUG00000022378) YWHAG (ENSELUG00000022319) dhrs11b.2 (ENSELUG00000022275) #14 SUPT6H (ENSELUG00000022246) ENSELUG00000022194 zgc:174895 (ENSELUG00000022182) rab34a (ENSELUG00000022157) TLCD1 (ENSELUG00000022119) nek8 (ENSELUG00000022112) traf4a (ENSELUG00000022083) tada2a (ENSELUG00000022045) #22 dusp14 (ENSELUG00000021870) SYNRG (ENSELUG00000021831) #24 hnf1ba (ENSELUG00000021708) #27 ENSELUG00000031919 ENSELUG00000021664 dynll2a (ENSELUG00000021655) srsf1a (ENSELUG00000021646) aldoca (ENSELUG00000021627) BLTP2 (ENSELUG00000021599) glod4 (ENSELUG00000021467) ENSELUG00000021426 ENSELUG00000021395 txndc17 (ENSELUG00000021364) ENSELUG00000021324 ENSELUG00000021294 Acanthomorphata ANCESTRAL SPECIES 8 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000264080 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00390000012195 Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000264080 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00390000012195 Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT01100000264080 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00390000012195 Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000179359 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 ENSGT00940000179359 Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d.d #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 ENSGT00940000179359 Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d.d #14 ENSGT00840000129887.g.a.d.c #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00390000001618 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 NAME_4 ANCESTRAL SPECIES 91 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d.d #14 ENSGT00840000129887.g.a.d.c #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 ENSGT00940000164902 ENSGT00940000165363 Mummichog MODERN SPECIES 448 P4HA3 (ENSFHEG00000013438) ENSFHEG00000013513 ENSFHEG00000013531 camkk1b (ENSFHEG00000000314) YWHAG (ENSFHEG00000013558) ca4b (ENSFHEG00000013574) ENSFHEG00000013599 #14 ENSFHEG00000013620 #14 ENSFHEG00000013626 ENSFHEG00000013630 zgc:174895 (ENSFHEG00000013652) rab34a (ENSFHEG00000013691) tlcd1 (ENSFHEG00000013696) nek8 (ENSFHEG00000013758) traf4a (ENSFHEG00000013788) tada2a (ENSFHEG00000013897) #22 dusp14 (ENSFHEG00000013923) Sheepshead minnow MODERN SPECIES 126 P4HA3 (ENSCVAG00000017778) ENSCVAG00000017819 ENSCVAG00000017832 camkk1b (ENSCVAG00000017883) YWHAG (ENSCVAG00000017888) ca4b (ENSCVAG00000018065) DHRS11 (ENSCVAG00000018098) #14 DHRS11 (ENSCVAG00000018126) #14 ENSCVAG00000018129 ENSCVAG00000018143 zgc:174895 (ENSCVAG00000018161) rab34a (ENSCVAG00000018191) tlcd1 (ENSCVAG00000018194) ENSCVAG00000018279 traf4a (ENSCVAG00000018317) tada2a (ENSCVAG00000018468) #22 dusp14 (ENSCVAG00000018493) SYNRG (ENSCVAG00000018542) #24 hnf1ba (ENSCVAG00000018565) #27 ENSCVAG00000018580 dynll2a (ENSCVAG00000018598) srsf1a (ENSCVAG00000018617) aldoca (ENSCVAG00000018653) BLTP2 (ENSCVAG00000018776) glod4 (ENSCVAG00000000999) ENSCVAG00000018816 ENSCVAG00000018857 txndc17 (ENSCVAG00000018863) ENSCVAG00000018871 PITPNM3 (ENSCVAG00000018950) slc47a4 (ENSCVAG00000019008) Poeciliinae ANCESTRAL SPECIES 14 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d.d #14 ENSGT00840000129887.g.a.d.c #14 ENSGT01100000263533.b.b.b.a.a.a.a.c.b.n ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00390000001618 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 Poecilia ANCESTRAL SPECIES 2 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d.d #14 ENSGT00840000129887.g.a.d.c #14 ENSGT01100000263533.b.b.b.a.a.a.a.c.b.n ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 NAME_6 ANCESTRAL SPECIES 135 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d.d #14 ENSGT00840000129887.g.a.c.a.b.b #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000164330 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Amazon molly MODERN SPECIES 457 P4HA3 (ENSPFOG00000007530) ENSPFOG00000007777 ENSPFOG00000008157 camkk1b (ENSPFOG00000008235) YWHAG (ENSPFOG00000008312) ENSPFOG00000008332 ca4b (ENSPFOG00000008343) dhrs11b.1 (ENSPFOG00000008482) #14 ENSPFOG00000008519 ENSPFOG00000008526 zgc:174895 (ENSPFOG00000008545) rab34a (ENSPFOG00000008547) tlcd1 (ENSPFOG00000008640) nek8 (ENSPFOG00000024665) traf4a (ENSPFOG00000008719) tada2a (ENSPFOG00000008916) #22 SYNRG (ENSPFOG00000009062) #24 hnf1ba (ENSPFOG00000009496) #27 dynll2a (ENSPFOG00000009626) ENSPFOG00000009643 srsf1a (ENSPFOG00000009640) aldoca (ENSPFOG00000009653) BLTP2 (ENSPFOG00000009779) glod4 (ENSPFOG00000010260) mrm3a (ENSPFOG00000010323) ENSPFOG00000010359 txndc17 (ENSPFOG00000010455) ENSPFOG00000010488 Sailfin molly MODERN SPECIES 1524 nek8 (ENSPLAG00000017818) traf4a (ENSPLAG00000017777) tada2a (ENSPLAG00000017760) #22 Guppy MODERN SPECIES 443 ENSPREG00000008647 ENSPREG00000008700 camkk1b (ENSPREG00000008724) YWHAG (ENSPREG00000008771) ENSPREG00000008779 ca4b (ENSPREG00000008797) ENSPREG00000008830 #14 ENSPREG00000008890 #14 ENSPREG00000008907 ENSPREG00000008919 zgc:174895 (ENSPREG00000008936) rab34a (ENSPREG00000008951) tlcd1 (ENSPREG00000008988) ENSPREG00000009020 traf4a (ENSPREG00000009192) tada2a (ENSPREG00000009214) #22 dusp14 (ENSPREG00000009270) SYNRG (ENSPREG00000009307) #24 hnf1ba (ENSPREG00000009474) #27 ENSPREG00000009517 dynll2a (ENSPREG00000009534) srsf1a (ENSPREG00000009667) ENSPREG00000009693 BLTP2 (ENSPREG00000009735) ENSPREG00000009909 ENSPREG00000009918 ENSPREG00000009933 txndc17 (ENSPREG00000009950) ENSPREG00000009963 ENSPREG00000009981 ENSPREG00000009998 Platyfish MODERN SPECIES 9 ENSXMAG00000011986 camkk1b (ENSXMAG00000011974) YWHAG (ENSXMAG00000022785) ca4b (ENSXMAG00000011956) ENSXMAG00000024390 ENSXMAG00000023328 #14 ENSXMAG00000025332 #14 ENSXMAG00000011932 #14 ENSXMAG00000022657 ENSXMAG00000024070 zgc:174895 (ENSXMAG00000028046) rab34a (ENSXMAG00000026496) tlcd1 (ENSXMAG00000027930) ENSXMAG00000011882 traf4a (ENSXMAG00000011868) tada2a (ENSXMAG00000011832) #22 dusp14 (ENSXMAG00000019675) SYNRG (ENSXMAG00000011807) #24 hnf1ba (ENSXMAG00000011775) #27 dynll2a (ENSXMAG00000022356) ENSXMAG00000027370 srsf1a (ENSXMAG00000011766) aldoca (ENSXMAG00000011729) ENSXMAG00000025618 RSKR (ENSXMAG00000007337) ENSXMAG00000022025 BLTP2 (ENSXMAG00000019085) glod4 (ENSXMAG00000019111) mrm3a (ENSXMAG00000019121) ENSXMAG00000003982 txndc17 (ENSXMAG00000025196) Aplocheiloidei ANCESTRAL SPECIES 8 ENSGT00390000007237.r.d ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00840000129887.g.a.d.c #14 ENSGT00840000129887.g.a.c.a.b.b #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Mangrove rivulus MODERN SPECIES 262 ENSKMAG00000019686 #14 ENSKMAG00000019676 zgc:174895 (ENSKMAG00000019669) rab34a (ENSKMAG00000019647) tlcd1 (ENSKMAG00000019635) nek8 (ENSKMAG00000019592) traf4a (ENSKMAG00000019563) tada2a (ENSKMAG00000019519) #22 dusp14 (ENSKMAG00000019508) SYNRG (ENSKMAG00000019335) #24 hnf1ba (ENSKMAG00000019275) #27 dynll2a (ENSKMAG00000019253) ENSKMAG00000019241 srsf1a (ENSKMAG00000019232) aldoca (ENSKMAG00000019197) BLTP2 (ENSKMAG00000019119) glod4 (ENSKMAG00000019085) mrm3a (ENSKMAG00000019066) nxn (ENSKMAG00000019040) ENSKMAG00000019030 txndc17 (ENSKMAG00000019008) ENSKMAG00000018934 PITPNM3 (ENSKMAG00000018890) Turquoise killifish MODERN SPECIES 1615 diabloa (ENSNFUG00015000596) ENSNFUG00015000593 P4HA3 (ENSNFUG00015000581) ENSNFUG00015000536 ENSNFUG00015000531 camkk1b (ENSNFUG00015000505) YWHAG1 (ENSNFUG00015000500) ENSNFUG00015000496 OLA.5237 (ENSNFUG00015000477) #14 PROCA1 (ENSNFUG00015000465) zgc:174895 (ENSNFUG00015000462) RAB34A (ENSNFUG00015000437) TLCD1 (ENSNFUG00015000416) nek8 (ENSNFUG00015000315) TRAF4A (ENSNFUG00015000222) tada2a (ENSNFUG00015000160) #22 DUSP14 (ENSNFUG00015000117) ENSNFUG00015000114 SYNRG (ENSNFUG00015003634) #24 HNF1BA (ENSNFUG00015003573) #27 ENSNFUG00015003561 DYNLL2A (ENSNFUG00015003555) SRSF1 (ENSNFUG00015003553) FAM222B (ENSNFUG00015003546) sagb (ENSNFUG00015003539) ENSNFUG00015003489 ENSNFUG00015003487 ENSNFUG00015003481 ENSNFUG00015003478 CR854907.1 (ENSNFUG00015003474) ATP1B3B (ENSNFUG00015003467) Oryzias ANCESTRAL SPECIES 8 ENSGT00390000007237.r.d ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00840000129887.g.a.d #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00390000012195 ENSGT00390000009714 ENSGT00940000153849.b Oryzias_b ANCESTRAL SPECIES 14 ENSGT00390000007237.r.d ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00840000129887.g.a.d #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00390000012195 ENSGT00390000009714 ENSGT00940000153849.b Indian medaka MODERN SPECIES 12 diabloa (ENSOMEG00000003389) or95a1 (ENSOMEG00000003400) P4HA3 (ENSOMEG00000003458) ENSOMEG00000003500 ENSOMEG00000003525 camkk1b (ENSOMEG00000000846) YWHAG (ENSOMEG00000003558) ENSOMEG00000003574 dhrs11b.1 (ENSOMEG00000003586) #14 ENSOMEG00000003598 zgc:174895 (ENSOMEG00000003619) rab34a (ENSOMEG00000003647) tlcd1 (ENSOMEG00000003658) nek8 (ENSOMEG00000003734) traf4a (ENSOMEG00000003761) tada2a (ENSOMEG00000000975) #22 dusp14 (ENSOMEG00000003820) SYNRG (ENSOMEG00000003978) #24 hnf1ba (ENSOMEG00000004063) #27 ENSOMEG00000004082 dynll2a (ENSOMEG00000004098) srsf1a (ENSOMEG00000004106) aldoca (ENSOMEG00000004124) ENSOMEG00000004135 BLTP2 (ENSOMEG00000004180) glod4 (ENSOMEG00000004211) mrm3a (ENSOMEG00000000985) nxn (ENSOMEG00000004242) txndc17 (ENSOMEG00000004258) ENSOMEG00000004275 PITPNM3 (ENSOMEG00000004309) Javanese ricefish MODERN SPECIES 4 ENSOJAG00000022021 diabloa (ENSOJAG00000022008) or95a1 (ENSOJAG00000021987) P4HA3 (ENSOJAG00000021860) ENSOJAG00000021832 ENSOJAG00000021822 camkk1b (ENSOJAG00000021779) YWHAG (ENSOJAG00000021772) dhrs11b.1 (ENSOJAG00000021764) #14 ENSOJAG00000021759 zgc:174895 (ENSOJAG00000021752) rab34a (ENSOJAG00000021743) tlcd1 (ENSOJAG00000021740) nek8 (ENSOJAG00000021571) traf4a (ENSOJAG00000021530) tada2a (ENSOJAG00000021469) #22 dusp14 (ENSOJAG00000021444) SYNRG (ENSOJAG00000021237) #24 hnf1ba (ENSOJAG00000021164) #27 ENSOJAG00000021151 dynll2a (ENSOJAG00000021144) srsf1a (ENSOJAG00000021130) aldoca (ENSOJAG00000021100) ENSOJAG00000021088 glod4 (ENSOJAG00000020930) mrm3a (ENSOJAG00000020928) nxn (ENSOJAG00000020905) txndc17 (ENSOJAG00000020892) ENSOJAG00000020876 ENSOJAG00000020648 slc47a4 (ENSOJAG00000020579) Oryzias_a ANCESTRAL SPECIES 8 ENSGT00390000007237.r.d ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00840000129887.g.a.d #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00600000084481 ENSGT00940000177065 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Japanese Medaka HdrR MODERN SPECIES 4 or95a1 (ENSORLG00000004262) P4HA3 (ENSORLG00000004276) ENSORLG00000022243 ENSORLG00000004325 camkk1b (ENSORLG00000004332) YWHAG (ENSORLG00000029386) ENSORLG00000004343 dhrs11b.1 (ENSORLG00000004364) #14 ENSORLG00000026777 zgc:174895 (ENSORLG00000004378) rab34a (ENSORLG00000004394) tlcd1 (ENSORLG00000004408) nek8 (ENSORLG00000004422) traf4a (ENSORLG00000004449) ENSORLG00000029403 tada2a (ENSORLG00000004489) #22 dusp14 (ENSORLG00000004501) SYNRG (ENSORLG00000004525) #24 hnf1ba (ENSORLG00000004564) #27 ENSORLG00000024686 dynll2a (ENSORLG00000004569) srsf1a (ENSORLG00000004580) aldoca (ENSORLG00000004617) BLTP2 (ENSORLG00000004656) ENSORLG00000027649 ENSORLG00000029014 glod4 (ENSORLG00000004680) mrm3a (ENSORLG00000028441) ENSORLG00000004701 ENSORLG00000022211 txndc17 (ENSORLG00000029099) Chinese medaka MODERN SPECIES 1047 ENSOSIG00000019317 ENSOSIG00000019315 diabloa (ENSOSIG00000019291) or95a1 (ENSOSIG00000019289) P4HA3 (ENSOSIG00000019284) ENSOSIG00000019282 ENSOSIG00000019278 YWHAG (ENSOSIG00000019274) dhrs11b.1 (ENSOSIG00000019273) #14 ENSOSIG00000019272 zgc:174895 (ENSOSIG00000019268) rab34a (ENSOSIG00000019265) tlcd1 (ENSOSIG00000019260) nek8 (ENSOSIG00000019252) traf4a (ENSOSIG00000019249) tada2a (ENSOSIG00000019224) #22 dusp14 (ENSOSIG00000019220) SYNRG (ENSOSIG00000019206) #24 hnf1ba (ENSOSIG00000019200) #27 ENSOSIG00000019191 srsf1a (ENSOSIG00000019187) aldoca (ENSOSIG00000019184) ENSOSIG00000019179 glod4 (ENSOSIG00000019168) mrm3a (ENSOSIG00000019164) ENSOSIG00000019138 txndc17 (ENSOSIG00000019134) ENSOSIG00000019132 PITPNM3 (ENSOSIG00000018116) slc47a4 (ENSOSIG00000017990) slc47a4 (ENSOSIG00000017974) Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 Cichlidae ANCESTRAL SPECIES 21 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a.d.a.a.a.a.a #14 ENSGT00840000129887.g.a.d.a.a.a.a.b #14 ENSGT00840000129887.g.a.d.b #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 ENSGT00940000165363 Pseudocrenilabrinae ANCESTRAL SPECIES 19 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b.c ENSGT00940000155690.b.b.d ENSGT00940000177105.d.b ENSGT00840000129887.g.a.d.b.a.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 ENSGT00940000165363 Pseudocrenilabrinae_A ANCESTRAL SPECIES 15 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b.c ENSGT00940000155690.b.b.d ENSGT00940000177105.d.b ENSGT00840000129887.g.a.d.b.a.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00940000177643 ENSGT00940000165363 Lyretail cichlid MODERN SPECIES 370 DHRS11 (ENSNBRG00000019502) #14 ENSNBRG00000019515 DHRS11 (ENSNBRG00000019526) #14 DHRS11 (ENSNBRG00000019541) #14 ENSNBRG00000019559 DHRS11 (ENSNBRG00000019570) #14 DHRS11 (ENSNBRG00000019592) #14 ENSNBRG00000019600 #14 ENSNBRG00000019618 ENSNBRG00000019718 zgc:174895 (ENSNBRG00000019733) rab34a (ENSNBRG00000019750) tlcd1 (ENSNBRG00000019777) nek8 (ENSNBRG00000019805) traf4a (ENSNBRG00000019838) tada2a (ENSNBRG00000019857) #22 dusp14 (ENSNBRG00000019889) SYNRG (ENSNBRG00000019914) #24 hnf1ba (ENSNBRG00000019949) #27 dynll2a (ENSNBRG00000019971) ENSNBRG00000019981 ENSNBRG00000020000 aldoca (ENSNBRG00000020013) RSKR (ENSNBRG00000020033) BLTP2 (ENSNBRG00000020079) ENSNBRG00000020127 glod4 (ENSNBRG00000020137) mrm3a (ENSNBRG00000020148) nxn (ENSNBRG00000020162) ENSNBRG00000020184 txndc17 (ENSNBRG00000020192) Haplochromini ANCESTRAL SPECIES 15 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b.c ENSGT00940000155690.b.b.d ENSGT00940000177105.d.b ENSGT00840000129887.g.a.d.b.a.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00940000178004 Burton s mouthbrooder MODERN SPECIES 408 ENSHBUG00000015969 #14 ENSHBUG00000000474 zgc:174895 (ENSHBUG00000016011) rab34a (ENSHBUG00000016064) tlcd1 (ENSHBUG00000016083) nek8 (ENSHBUG00000016176) traf4a (ENSHBUG00000016210) tada2a (ENSHBUG00000016319) #22 dusp14 (ENSHBUG00000016361) SYNRG (ENSHBUG00000016607) #24 hnf1ba (ENSHBUG00000016703) #27 ENSHBUG00000016730 dynll2a (ENSHBUG00000016748) srsf1a (ENSHBUG00000016788) aldoca (ENSHBUG00000016830) ENSHBUG00000016864 BLTP2 (ENSHBUG00000016977) ENSHBUG00000016997 glod4 (ENSHBUG00000017024) mrm3a (ENSHBUG00000017040) ENSHBUG00000017172 txndc17 (ENSHBUG00000017199) ENSHBUG00000017217 Haplochromini_A ANCESTRAL SPECIES 20 ENSGT00840000129887.g.a.d.a.a.a.a.a.b #14 ENSGT00840000129887.g.a.d.a.a.a.a.a.a.a #14 ENSGT00940000155351.j.b ENSGT00840000129887.g.a.d.b.a.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000164330.f ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00940000178004 P. nyererei MODERN SPECIES 386 ENSPNYG00000017674 DHRS11 (ENSPNYG00000017655) #14 ENSPNYG00000017625 DHRS11 (ENSPNYG00000017589) #14 ENSPNYG00000017568 zgc:174895 (ENSPNYG00000017545) rab34a (ENSPNYG00000017514) tlcd1 (ENSPNYG00000017502) nek8 (ENSPNYG00000017466) traf4a (ENSPNYG00000017433) tada2a (ENSPNYG00000017355) #22 dusp14 (ENSPNYG00000017279) SYNRG (ENSPNYG00000017234) #24 hnf1ba (ENSPNYG00000017191) #27 ENSPNYG00000017168 dynll2a (ENSPNYG00000017151) ENSPNYG00000017115 aldoca (ENSPNYG00000017074) ENSPNYG00000017039 BLTP2 (ENSPNYG00000016873) glod4 (ENSPNYG00000016823) mrm3a (ENSPNYG00000016809) ENSPNYG00000016745 txndc17 (ENSPNYG00000016718) ENSPNYG00000016694 ENSPNYG00000016684 Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00840000129887.g.a.d.a.a.a.a.a.a.b.a #14 ENSGT00840000129887.g.a.d.a.a.a.a.b.a.a.a #14 ENSGT00840000129887.g.a.d.a.a.a.b.a #14 ENSGT00840000129887.g.a.d.b.b #14 ENSGT00840000129887.g.a.d.b.a.b #14 ENSGT00840000129887.g.a.d.a.a.a.a.a.b #14 ENSGT00840000129887.g.a.d.a.a.a.a.a.a.a #14 ENSGT00940000155351.j.b ENSGT00840000129887.g.a.d.b.a.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000164330.f ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Zebra mbuna MODERN SPECIES 1096 ENSMZEG00005008521 #14 ENSMZEG00005008503 ENSMZEG00005008491 #14 ENSMZEG00005008463 #14 ENSMZEG00005008451 #14 ENSMZEG00005008440 ENSMZEG00005008399 ENSMZEG00005008379 #14 ENSMZEG00005008363 #14 ENSMZEG00005008337 zgc:174895 (ENSMZEG00005008324) rab34a (ENSMZEG00005008306) tlcd1 (ENSMZEG00005008271) nek8 (ENSMZEG00005008230) traf4a (ENSMZEG00005008204) tada2a (ENSMZEG00005008149) #22 dusp14 (ENSMZEG00005008126) SYNRG (ENSMZEG00005008013) #24 hnf1ba (ENSMZEG00005007968) #27 ENSMZEG00005007961 dynll2a (ENSMZEG00005007956) ENSMZEG00005007947 aldoca (ENSMZEG00005007932) RSKR (ENSMZEG00005007923) BLTP2 (ENSMZEG00005007881) ENSMZEG00005007872 glod4 (ENSMZEG00005007855) mrm3a (ENSMZEG00005007844) ENSMZEG00005007819 txndc17 (ENSMZEG00005007802) ENSMZEG00005007789 Eastern happy DUPLICATION Eastern happy MODERN SPECIES 5 DHRS11 (ENSACLG00000003809) #14 DHRS11 (ENSACLG00000003840) #14 DHRS11 (ENSACLG00000003858) #14 DHRS11 (ENSACLG00000003895) #14 DHRS11 (ENSACLG00000003909) #14 DHRS11 (ENSACLG00000003919) #14 DHRS11 (ENSACLG00000004086) #14 gsto2 (ENSACLG00000004114) DHRS11 (ENSACLG00000005029) #14 ENSACLG00000005054 zgc:174895 (ENSACLG00000005077) rab34a (ENSACLG00000005093) tlcd1 (ENSACLG00000005128) nek8 (ENSACLG00000005137) traf4a (ENSACLG00000005204) tada2a (ENSACLG00000005226) #22 ENSACLG00000005285 dusp14 (ENSACLG00000005286) SYNRG (ENSACLG00000005301) #24 hnf1ba (ENSACLG00000005597) #27 dynll2a (ENSACLG00000005661) ENSACLG00000005676 ENSACLG00000005695 aldoca (ENSACLG00000005703) RSKR (ENSACLG00000005734) BLTP2 (ENSACLG00000005758) ENSACLG00000005810 glod4 (ENSACLG00000005815) mrm3a (ENSACLG00000005833) ENSACLG00000005845 txndc17 (ENSACLG00000005873) Eastern happy MODERN SPECIES 178 ENSACLG00000004918 #22 ENSACLG00000004928 Nile tilapia MODERN SPECIES 5 ca4b (ENSONIG00000037796) DHRS11 (ENSONIG00000042123) #14 ENSONIG00000013188 DHRS11 (ENSONIG00000037658) #14 ENSONIG00000027197 DHRS11 (ENSONIG00000028471) #14 ENSONIG00000013181 DHRS11 (ENSONIG00000013180) #14 DHRS11 (ENSONIG00000013178) #14 ENSONIG00000013177 zgc:174895 (ENSONIG00000013176) rab34a (ENSONIG00000031229) tlcd1 (ENSONIG00000013172) nek8 (ENSONIG00000013168) traf4a (ENSONIG00000013167) tada2a (ENSONIG00000013165) #22 dusp14 (ENSONIG00000021061) SYNRG (ENSONIG00000013163) #24 hnf1ba (ENSONIG00000013161) #27 ENSONIG00000035880 dynll2a (ENSONIG00000041613) srsf1a (ENSONIG00000013160) aldoca (ENSONIG00000013159) RSKR (ENSONIG00000027373) BLTP2 (ENSONIG00000013154) glod4 (ENSONIG00000013153) mrm3a (ENSONIG00000013152) ENSONIG00000013150 txndc17 (ENSONIG00000027715) ENSONIG00000013149 PITPNM3 (ENSONIG00000013148) Midas cichlid MODERN SPECIES 437 DHRS11 (ENSACIG00000008753) #14 ENSACIG00000008748 ENSACIG00000008736 #14 ENSACIG00000008727 ENSACIG00000008717 ENSACIG00000008707 DHRS11 (ENSACIG00000008694) #14 DHRS11 (ENSACIG00000008677) #14 ENSACIG00000008667 ENSACIG00000008651 zgc:174895 (ENSACIG00000008638) rab34a (ENSACIG00000008620) tlcd1 (ENSACIG00000008564) nek8 (ENSACIG00000008529) traf4a (ENSACIG00000008513) tada2a (ENSACIG00000008479) #22 dusp14 (ENSACIG00000008469) SYNRG (ENSACIG00000008352) #24 hnf1ba (ENSACIG00000008157) #27 dynll2a (ENSACIG00000008116) ENSACIG00000008108 srsf1a (ENSACIG00000008091) aldoca (ENSACIG00000008074) ENSACIG00000008058 BLTP2 (ENSACIG00000007983) ENSACIG00000007964 glod4 (ENSACIG00000007936) mrm3a (ENSACIG00000007921) nxn (ENSACIG00000007904) ENSACIG00000007896 txndc17 (ENSACIG00000007887) Pomacentridae ANCESTRAL SPECIES 5 ENSGT00840000129887.g.a.c.a.b.a.b #14 ENSGT00840000129887.g.a.c.a.b.a.a.a #14 ENSGT00840000129887.g.a.c.a.b.b #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00390000001618 ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00840000129887.g.a.c.b #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 Amphiprion ANCESTRAL SPECIES 36 ENSGT00840000129887.g.a.c.a.b.a.a.a #14 ENSGT00840000129887.g.a.c.a.b.b #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00840000129887.g.a.c.a.b.a.a.b #14 ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Clown anemonefish MODERN SPECIES 1887 tlcd1 (ENSAOCG00000005209) DHRS11 (ENSAOCG00000005220) #14 nek8 (ENSAOCG00000005244) traf4a (ENSAOCG00000005263) tada2a (ENSAOCG00000005295) #22 dusp14 (ENSAOCG00000005309) Orange clownfish MODERN SPECIES 23 ppp1r37 (ENSAPEG00000010771) ENSAPEG00000010737 mrpl28 (ENSAPEG00000010705) camkk1b (ENSAPEG00000010616) YWHAG (ENSAPEG00000010597) DHRS11 (ENSAPEG00000010562) #14 tlcd1 (ENSAPEG00000010552) rab34a (ENSAPEG00000010503) zgc:174895 (ENSAPEG00000010474) ENSAPEG00000010427 ENSAPEG00000010409 #14 DHRS11 (ENSAPEG00000010377) #14 DHRS11 (ENSAPEG00000010354) #14 nek8 (ENSAPEG00000010295) traf4a (ENSAPEG00000010262) tada2a (ENSAPEG00000010194) #22 dusp14 (ENSAPEG00000010169) SYNRG (ENSAPEG00000010075) #24 hnf1ba (ENSAPEG00000010003) #27 ENSAPEG00000009976 dynll2a (ENSAPEG00000009951) srsf1a (ENSAPEG00000009915) aldoca (ENSAPEG00000009877) RSKR (ENSAPEG00000009824) ENSAPEG00000009807 BLTP2 (ENSAPEG00000009665) glod4 (ENSAPEG00000009430) mrm3a (ENSAPEG00000009402) ENSAPEG00000009380 txndc17 (ENSAPEG00000009349) ENSAPEG00000009312 Spiny chromis MODERN SPECIES 271 DHRS11 (ENSAPOG00000003230) #14 ENSAPOG00000003195 zgc:174895 (ENSAPOG00000003179) rab34a (ENSAPOG00000003165) tlcd1 (ENSAPOG00000003122) ENSAPOG00000003114 nek8 (ENSAPOG00000003101) traf4a (ENSAPOG00000003034) tada2a (ENSAPOG00000002997) #22 dusp14 (ENSAPOG00000002916) SYNRG (ENSAPOG00000002893) #24 hnf1ba (ENSAPOG00000002822) #27 dynll2a (ENSAPOG00000002778) ENSAPOG00000002767 srsf1a (ENSAPOG00000002748) aldoca (ENSAPOG00000002742) RSKR (ENSAPOG00000002708) ENSAPOG00000002660 BLTP2 (ENSAPOG00000002626) ENSAPOG00000002553 glod4 (ENSAPOG00000002543) mrm3a (ENSAPOG00000002497) ENSAPOG00000002488 txndc17 (ENSAPOG00000002472) Bicolor damselfish MODERN SPECIES 1419 ENSSPAG00000017611 ENSSPAG00000017589 #14 ENSSPAG00000017579 #14 ENSSPAG00000017565 #14 ENSSPAG00000017557 ENSSPAG00000017527 #14 ENSSPAG00000017508 #14 ENSSPAG00000017504 #14 ENSSPAG00000017482 #14 ENSSPAG00000017435 zgc:174895 (ENSSPAG00000017411) rab34a (ENSSPAG00000017348) tlcd1 (ENSSPAG00000017330) nek8 (ENSSPAG00000017285) traf4a (ENSSPAG00000017249) tada2a (ENSSPAG00000017219) #22 dusp14 (ENSSPAG00000017200) Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00940000178004 Anabantaria ANCESTRAL SPECIES 9 ENSGT00390000017207.i.a ENSGT00390000009083.n ENSGT00940000156097.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Anabantoidei ANCESTRAL SPECIES 14 ENSGT00390000017207.i.a ENSGT00390000009083.n ENSGT00940000156097.a ENSGT00540000072704 ENSGT00940000157083 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 ENSGT00940000153849.b Climbing perch MODERN SPECIES 4 ENSATEG00000000378 arcn1b (ENSATEG00000000328) ENSATEG00000000293 ENSATEG00000000221 ENSATEG00000000132 ENSATEG00000000019 ENSATEG00000023086 ENSATEG00000026976 ENSATEG00000023070 ENSATEG00000023068 zgc:174895 (ENSATEG00000023061) rab34a (ENSATEG00000023047) TLCD1 (ENSATEG00000027345) nek8 (ENSATEG00000023024) traf4a (ENSATEG00000028365) tada2a (ENSATEG00000022715) #22 dusp14 (ENSATEG00000022684) ENSATEG00000022634 #24 hnf1ba (ENSATEG00000022486) #27 ENSATEG00000022449 dynll2a (ENSATEG00000026114) srsf1a (ENSATEG00000029959) aldoca (ENSATEG00000022384) ENSATEG00000022378 ENSATEG00000022312 glod4 (ENSATEG00000022290) mrm3a (ENSATEG00000022280) ENSATEG00000027639 txndc17 (ENSATEG00000022258) ENSATEG00000022239 PITPNM3 (ENSATEG00000022195) Siamese fighting fish MODERN SPECIES 4 ubash3bb (ENSBSLG00000009423) gkup (ENSBSLG00000009485) usf1l (ENSBSLG00000009553) camkk1b (ENSBSLG00000009567) YWHAG (ENSBSLG00000009622) ca4b (ENSBSLG00000009682) ENSBSLG00000009722 dhrs11b.1 (ENSBSLG00000009759) #14 ENSBSLG00000009791 zgc:174895 (ENSBSLG00000009831) rab34a (ENSBSLG00000009851) tlcd1 (ENSBSLG00000009921) ENSBSLG00000009928 nek8 (ENSBSLG00000009993) traf4a (ENSBSLG00000010147) tada2a (ENSBSLG00000010751) #22 dusp14 (ENSBSLG00000011218) SYNRG (ENSBSLG00000011255) #24 hnf1ba (ENSBSLG00000012444) #27 ENSBSLG00000012494 dynll2a (ENSBSLG00000012504) srsf1a (ENSBSLG00000012510) aldoca (ENSBSLG00000012523) BLTP2 (ENSBSLG00000012699) ENSBSLG00000012739 nxn (ENSBSLG00000012745) ENSBSLG00000012760 ENSBSLG00000012770 PITPNM3 (ENSBSLG00000012788) slc47a4 (ENSBSLG00000012896) slc47a4 (ENSBSLG00000012903) Zig-zag eel MODERN SPECIES 4 ENSMAMG00000019068 ENSMAMG00000019004 ENSMAMG00000018957 ENSMAMG00000018918 ENSMAMG00000018851 ENSMAMG00000025463 ENSMAMG00000018775 ENSMAMG00000027921 ENSMAMG00000018731 ENSMAMG00000018722 zgc:174895 (ENSMAMG00000026501) rab34a (ENSMAMG00000018672) TLCD1 (ENSMAMG00000026852) nek8 (ENSMAMG00000018641) traf4a (ENSMAMG00000027630) tada2a (ENSMAMG00000018578) #22 dusp14 (ENSMAMG00000018571) ENSMAMG00000018521 #24 hnf1ba (ENSMAMG00000018488) #27 dynll2a (ENSMAMG00000028639) ENSMAMG00000018465 srsf1a (ENSMAMG00000018454) aldoca (ENSMAMG00000018433) ENSMAMG00000018411 ENSMAMG00000018400 ENSMAMG00000018331 glod4 (ENSMAMG00000026686) mrm3a (ENSMAMG00000018298) ENSMAMG00000018285 txndc17 (ENSMAMG00000018271) ENSMAMG00000018249 Carangaria ANCESTRAL SPECIES 8 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 ENSGT00940000177552 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00390000012195 Pleuronectoidei ANCESTRAL SPECIES 59 ENSGT00940000163324.c.b.m ENSGT00390000007237.r.d ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00940000155690.b.b ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 Turbot MODERN SPECIES 15 ENSSMAG00000032785 diabloa (ENSSMAG00000004756) ENSSMAG00000004748 ENSSMAG00000004732 ENSSMAG00000004610 ENSSMAG00000034996 ENSSMAG00000004488 ENSSMAG00000024546 ENSSMAG00000004469 ENSSMAG00000004441 zgc:174895 (ENSSMAG00000004389) rab34a (ENSSMAG00000004343) TLCD1 (ENSSMAG00000033437) nek8 (ENSSMAG00000004267) traf4a (ENSSMAG00000021509) tada2a (ENSSMAG00000004182) #22 dusp14 (ENSSMAG00000004177) ENSSMAG00000004139 #24 postnb (ENSSMAG00000004063) trpc4b (ENSSMAG00000004032) frem2b (ENSSMAG00000003959) ENSSMAG00000003896 ENSSMAG00000003882 arfip2a (ENSSMAG00000003847) ENSSMAG00000003815 ENSSMAG00000003805 ENSSMAG00000003782 ENSSMAG00000028867 TIAM1 (ENSSMAG00000003631) ENSSMAG00000003623 cldn8.2 (ENSSMAG00000003601) Tongue sole MODERN SPECIES 14 wdr81 (ENSCSEG00000013116) serpinf2b (ENSCSEG00000013101) rpa1 (ENSCSEG00000013066) rtn4rl1b (ENSCSEG00000013052) dph1 (ENSCSEG00000013044) hic1 (ENSCSEG00000013032) tsr1 (ENSCSEG00000013009) TAOK1 (ENSCSEG00000012981) paf1 (ENSCSEG00000012968) rab34a (ENSCSEG00000012961) zgc:174895 (ENSCSEG00000012956) ENSCSEG00000012935 tlcd1 (ENSCSEG00000012907) nek8 (ENSCSEG00000012887) traf4a (ENSCSEG00000012873) tada2a (ENSCSEG00000012855) #22 TIAM1 (ENSCSEG00000012824) SCAF4 (ENSCSEG00000012808) ENSCSEG00000012806 urb1 (ENSCSEG00000012616) ENSCSEG00000012559 arfip2a (ENSCSEG00000012529) ENSCSEG00000012511 ENSCSEG00000012503 ENSCSEG00000012436 ENSCSEG00000012417 ENSCSEG00000012333 ENSCSEG00000012315 ENSCSEG00000012306 ENSCSEG00000012245 ENSCSEG00000012187 Carangaria_A ANCESTRAL SPECIES 10 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00980000199093 ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00960000191650 ENSGT00940000161894 Seriola ANCESTRAL SPECIES 70 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Greater amberjack MODERN SPECIES 112 or95a1 (ENSSDUG00000010712) P4HA3 (ENSSDUG00000010715) C2CD3 (ENSSDUG00000010738) ENSSDUG00000010791 camkk1b (ENSSDUG00000010805) YWHAG (ENSSDUG00000010835) ENSSDUG00000010840 ca4b (ENSSDUG00000010854) dhrs11b.1 (ENSSDUG00000010882) #14 ENSSDUG00000010906 zgc:174895 (ENSSDUG00000010914) rab34a (ENSSDUG00000010942) tlcd1 (ENSSDUG00000010973) nek8 (ENSSDUG00000010988) traf4a (ENSSDUG00000011037) tada2a (ENSSDUG00000011060) #22 dusp14 (ENSSDUG00000011132) SYNRG (ENSSDUG00000011163) #24 hnf1ba (ENSSDUG00000011246) #27 dynll2a (ENSSDUG00000011271) ENSSDUG00000011283 srsf1a (ENSSDUG00000011303) aldoca (ENSSDUG00000011331) RSKR (ENSSDUG00000011348) BLTP2 (ENSSDUG00000011368) ENSSDUG00000011427 ENSSDUG00000011445 glod4 (ENSSDUG00000011454) ENSSDUG00000011474 ENSSDUG00000011489 txndc17 (ENSSDUG00000011505) Yellowtail amberjack MODERN SPECIES 1993 traf4a (ENSSLDG00000006912) tada2a (ENSSLDG00000006949) #22 dusp14 (ENSSLDG00000007013) Barramundi perch MODERN SPECIES 119 or95a1 (ENSLCAG00010012971) P4HA3 (ENSLCAG00010012939) ENSLCAG00010012912 ENSLCAG00010012908 ENSLCAG00010012906 camkk1b (ENSLCAG00010012494) YWHAG (ENSLCAG00010012344) ca4b (ENSLCAG00010012338) dhrs11b.1 (ENSLCAG00010012332) #14 ENSLCAG00010012325 zgc:174895 (ENSLCAG00010012318) rab34a (ENSLCAG00010012303) tlcd1 (ENSLCAG00010012298) nek8 (ENSLCAG00010012284) traf4a (ENSLCAG00010012253) tada2a (ENSLCAG00010012236) #22 dusp14 (ENSLCAG00010012228) SYNRG (ENSLCAG00010012208) #24 hnf1ba (ENSLCAG00010012202) #27 dynll2a (ENSLCAG00010012174) ENSLCAG00010012167 srsf1a (ENSLCAG00010012160) aldoca (ENSLCAG00010012150) RSKR (ENSLCAG00010012138) BLTP2 (ENSLCAG00010012092) glod4 (ENSLCAG00010012041) ENSLCAG00010012028 nxn (ENSLCAG00010012014) txndc17 (ENSLCAG00010011997) Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000158967 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000158967 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Ballan wrasse MODERN SPECIES 383 diabloa (ENSLBEG00000025686) or95a1 (ENSLBEG00000025712) P4HA3 (ENSLBEG00000025721) ENSLBEG00000025766 ENSLBEG00000025823 camkk1b (ENSLBEG00000025846) YWHAG (ENSLBEG00000025865) dhrs11b.1 (ENSLBEG00000025884) #14 ca4b (ENSLBEG00000025934) ENSLBEG00000025970 zgc:174895 (ENSLBEG00000025988) rab34a (ENSLBEG00000026006) tlcd1 (ENSLBEG00000026036) nek8 (ENSLBEG00000026072) traf4a (ENSLBEG00000026134) tada2a (ENSLBEG00000026167) #22 dusp14 (ENSLBEG00000026215) SYNRG (ENSLBEG00000026280) #24 rhoub (ENSLBEG00000026384) rtn2a (ENSLBEG00000026400) ppm1na (ENSLBEG00000026427) ENSLBEG00000026461 PTGIR (ENSLBEG00000026490) ENSLBEG00000026503 Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000158967 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000158967 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Perciformes_a ANCESTRAL SPECIES 9 ENSGT00390000007237.r.d ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 ENSGT00940000153849.b Channel bull blenny MODERN SPECIES 4 diabloa (ENSCGOG00000001790) or95a1 (ENSCGOG00000001786) P4HA3 (ENSCGOG00000001753) ENSCGOG00000001694 ENSCGOG00000001691 camkk1b (ENSCGOG00000001684) YWHAG (ENSCGOG00000001677) ca4b (ENSCGOG00000001661) dhrs11b.1 (ENSCGOG00000001599) #14 ENSCGOG00000023865 zgc:174895 (ENSCGOG00000023863) rab34a (ENSCGOG00000023857) tlcd1 (ENSCGOG00000023856) nek8 (ENSCGOG00000023843) traf4a (ENSCGOG00000023829) tada2a (ENSCGOG00000023689) #22 dusp14 (ENSCGOG00000023672) SYNRG (ENSCGOG00000023621) #24 hnf1ba (ENSCGOG00000023597) #27 ENSCGOG00000023594 dynll2a (ENSCGOG00000023586) srsf1a (ENSCGOG00000023585) aldoca (ENSCGOG00000023582) RSKR (ENSCGOG00000023574) ENSCGOG00000023571 glod4 (ENSCGOG00000023526) mrm3a (ENSCGOG00000023524) ENSCGOG00000023496 txndc17 (ENSCGOG00000023489) ENSCGOG00000023487 PITPNM3 (ENSCGOG00000023463) Pike perch MODERN SPECIES 14 diabloa (ENSSLUG00000007455) or95a1 (ENSSLUG00000007451) P4HA3 (ENSSLUG00000007419) C2CD3 (ENSSLUG00000007282) ENSSLUG00000007246 camkk1b (ENSSLUG00000007217) YWHAG (ENSSLUG00000007207) ca4b (ENSSLUG00000007204) dhrs11b.1 (ENSSLUG00000007197) #14 ENSSLUG00000007190 ENSSLUG00000007188 rab34a (ENSSLUG00000006803) tlcd1 (ENSSLUG00000006795) nek8 (ENSSLUG00000006547) traf4a (ENSSLUG00000006532) tada2a (ENSSLUG00000006145) #22 dusp14 (ENSSLUG00000006121) SYNRG (ENSSLUG00000005426) #24 hnf1ba (ENSSLUG00000005321) #27 dynll2a (ENSSLUG00000005292) ENSSLUG00000005281 srsf1a (ENSSLUG00000005263) aldoca (ENSSLUG00000005211) ENSSLUG00000005152 glod4 (ENSSLUG00000014057) ENSSLUG00000014036 ENSSLUG00000014005 txndc17 (ENSSLUG00000013997) ENSSLUG00000013979 ENSSLUG00000013954 ENSSLUG00000013946 Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000158967 ENSGT00510000048072 ENSGT00730000113647 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00940000177015 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00940000177065 ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000165363 ENSGT00390000012195 ENSGT00390000009714 Lumpfish MODERN SPECIES 4 ENSCLMG00005005750 ENSCLMG00005005747 P4HA3 (ENSCLMG00005005546) ENSCLMG00005005537 ENSCLMG00005005536 camkk1b (ENSCLMG00005005534) YWHAG (ENSCLMG00005005533) ca4b (ENSCLMG00005005531) dhrs11b.1 (ENSCLMG00005005529) #14 ENSCLMG00005005527 zgc:174895 (ENSCLMG00005005525) rab34a (ENSCLMG00005005430) tlcd1 (ENSCLMG00005005425) nek8 (ENSCLMG00005005365) traf4a (ENSCLMG00005005361) tada2a (ENSCLMG00005004386) #22 dusp14 (ENSCLMG00005009222) SYNRG (ENSCLMG00005009216) #24 hnf1ba (ENSCLMG00005009205) #27 ENSCLMG00005009203 dynll2a (ENSCLMG00005009201) srsf1a (ENSCLMG00005009200) aldoca (ENSCLMG00005009197) RSKR (ENSCLMG00005009195) ENSCLMG00005009194 glod4 (ENSCLMG00005009167) mrm3a (ENSCLMG00005009158) ENSCLMG00005009152 txndc17 (ENSCLMG00005009151) ENSCLMG00005009150 PITPNM3 (ENSCLMG00005009142) Stickleback MODERN SPECIES diabloa (ENSGACG00000011316) or95a1 (ENSGACG00000011312) P4HA3 (ENSGACG00000011291) C2CD3 (ENSGACG00000011281) ENSGACG00000011279 ENSGACG00000011266 camkk1b (ENSGACG00000011259) YWHAG (ENSGACG00000011251) ENSGACG00000011249 ca4b (ENSGACG00000011230) ENSGACG00000011223 rab34a (ENSGACG00000011190) tlcd1 (ENSGACG00000011181) nek8 (ENSGACG00000011167) traf4a (ENSGACG00000011157) tada2a (ENSGACG00000011119) #22 SYNRG (ENSGACG00000011112) #24 hnf1ba (ENSGACG00000011101) #27 dynll2a (ENSGACG00000011096) ENSGACG00000011094 aldoca (ENSGACG00000011018) BLTP2 (ENSGACG00000011002) glod4 (ENSGACG00000010984) ENSGACG00000010971 ENSGACG00000010966 txndc17 (ENSGACG00000010961) ENSGACG00000010951 PITPNM3 (ENSGACG00000010940) slc47a4 (ENSGACG00000010927) ENSGACG00000010917 SLC13A5 (ENSGACG00000010876) Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00390000012195 ENSGT00390000009714 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000165734 ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000000378.d.a.o.b ENSGT00940000177015 ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00940000177065 ENSGT00390000012340 ENSGT00940000166642 ENSGT00940000161894 ENSGT00390000012195 ENSGT00390000009714 European seabass MODERN SPECIES 3 ENSDLAG00005031758 ENSDLAG00005024174 ENSDLAG00005033378 ENSDLAG00005024091 ENSDLAG00005024011 ENSDLAG00005028295 ENSDLAG00005023997 ENSDLAG00005023989 dhrs11b.1 (ENSDLAG00005023986) #14 ENSDLAG00005023979 zgc:174895 (ENSDLAG00005023974) rab34a (ENSDLAG00005023946) TLCD1 (ENSDLAG00005029012) nek8 (ENSDLAG00005023909) traf4a (ENSDLAG00005028296) tada2a (ENSDLAG00005023825) #22 dusp14 (ENSDLAG00005029571) ENSDLAG00005023552 #24 hnf1ba (ENSDLAG00005023508) #27 ENSDLAG00005029114 ENSDLAG00005023502 srsf1a (ENSDLAG00005023483) aldoca (ENSDLAG00005023375) ENSDLAG00005032756 ENSDLAG00005023331 glod4 (ENSDLAG00005023319) mrm3a (ENSDLAG00005023313) nxn (ENSDLAG00005023303) txndc17 (ENSDLAG00005034141) ENSDLAG00005023288 PITPNM3 (ENSDLAG00005023225) Large yellow croaker MODERN SPECIES 479 ENSLCRG00005010809 ENSLCRG00005010861 ENSLCRG00005010862 ENSLCRG00005010864 ENSLCRG00005010867 ENSLCRG00005000127 ENSLCRG00005000147 ENSLCRG00005000163 ENSLCRG00005000175 PLCH1 (ENSLCRG00005000358) c18h3orf33 (ENSLCRG00005002144) med13b (ENSLCRG00005002155) zgc:112083 (ENSLCRG00005002238) tlcd1 (ENSLCRG00005002242) nek8 (ENSLCRG00005002258) tada2a (ENSLCRG00005002474) #22 dusp14 (ENSLCRG00005003466) SYNRG (ENSLCRG00005003479) #24 hnf1ba (ENSLCRG00005004164) #27 dynll2a (ENSLCRG00005004169) ENSLCRG00005004170 srsf1a (ENSLCRG00005004172) aldoca (ENSLCRG00005004174) RSKR (ENSLCRG00005004581) BLTP2 (ENSLCRG00005004588) ENSLCRG00005004595 glod4 (ENSLCRG00005004596) mrm3a (ENSLCRG00005004598) nxn (ENSLCRG00005004601) txndc17 (ENSLCRG00005004646) ENSLCRG00005004650 Gilthead seabream MODERN SPECIES 11 diabloa (ENSSAUG00010025638) or95a1 (ENSSAUG00010025639) P4HA3 (ENSSAUG00010025642) ENSSAUG00010025671 ENSSAUG00010025675 camkk1b (ENSSAUG00010025681) YWHAG (ENSSAUG00010000111) ca4b (ENSSAUG00010000117) dhrs11b.1 (ENSSAUG00010000119) #14 ENSSAUG00010000127 zgc:174895 (ENSSAUG00010000130) rab34a (ENSSAUG00010000135) tlcd1 (ENSSAUG00010000155) nek8 (ENSSAUG00010000213) traf4a (ENSSAUG00010000284) tada2a (ENSSAUG00010000317) #22 dusp14 (ENSSAUG00010000348) SYNRG (ENSSAUG00010000463) #24 hnf1ba (ENSSAUG00010000745) #27 dynll2a (ENSSAUG00010000753) ENSSAUG00010000756 srsf1a (ENSSAUG00010000759) aldoca (ENSSAUG00010000765) RSKR (ENSSAUG00010000776) BLTP2 (ENSSAUG00010000788) ENSSAUG00010000837 glod4 (ENSSAUG00010000843) mrm3a (ENSSAUG00010000849) ENSSAUG00010000856 txndc17 (ENSSAUG00010000868) ENSSAUG00010000872 Tetraodontidae ANCESTRAL SPECIES 10 ENSGT00940000163324.c.a.a ENSGT00940000158967 ENSGT00510000048072 ENSGT00940000165592.a ENSGT00940000154890.a.b ENSGT01090000260061.c.a.c.a.a.a ENSGT00950000183203.d.c ENSGT00940000155690.b.b ENSGT00840000129887.g.a #14 ENSGT00940000165341 ENSGT00940000165122 ENSGT00940000159645 ENSGT01010000222313.B.a ENSGT00940000159297 ENSGT00940000158628 ENSGT00940000156751 #22 ENSGT00940000164527.b ENSGT00390000010789 #24 ENSGT00940000153818.a.b.a.b #27 ENSGT00390000001618 ENSGT00390000000378.d.a.o.b ENSGT00940000155585.a ENSGT00950000182987.c.a.b.b ENSGT00940000160082.a.a ENSGT00600000084481 ENSGT00390000012340 ENSGT00940000164902 ENSGT00940000161894 ENSGT00390000012195 ENSGT00390000009714 ENSGT00940000153849.b Tetraodon MODERN SPECIES 8 diabloa (ENSTNIG00000016242) P4HA3 (ENSTNIG00000016241) ENSTNIG00000016240 ENSTNIG00000016239 camkk1b (ENSTNIG00000016238) YWHAG (ENSTNIG00000016237) ENSTNIG00000016236 ca4b (ENSTNIG00000016235) dhrs11b.1 (ENSTNIG00000016234) #14 ENSTNIG00000016233 zgc:174895 (ENSTNIG00000016232) rab34a (ENSTNIG00000016231) tlcd1 (ENSTNIG00000016230) nek8 (ENSTNIG00000016229) traf4a (ENSTNIG00000016228) tada2a (ENSTNIG00000016227) #22 dusp14 (ENSTNIG00000001454) SYNRG (ENSTNIG00000016226) #24 hnf1ba (ENSTNIG00000016225) #27 dynll2a (ENSTNIG00000016224) srsf1a (ENSTNIG00000016223) aldoca (ENSTNIG00000001827) BLTP2 (ENSTNIG00000016222) glod4 (ENSTNIG00000016221) ENSTNIG00000016220 nxn (ENSTNIG00000016219) ENSTNIG00000016218 ENSTNIG00000016217 txndc17 (ENSTNIG00000016216) ENSTNIG00000000198 PITPNM3 (ENSTNIG00000016215) Fugu MODERN SPECIES 2 ENSTRUG00000027314 diabloa (ENSTRUG00000023117) or95a1 (ENSTRUG00000027006) ENSTRUG00000007403 ENSTRUG00000006965 camkk1b (ENSTRUG00000006711) YWHAG (ENSTRUG00000022867) ca4b (ENSTRUG00000006382) dhrs11b.1 (ENSTRUG00000006229) #14 ENSTRUG00000024071 zgc:174895 (ENSTRUG00000022736) rab34a (ENSTRUG00000005937) tlcd1 (ENSTRUG00000025575) nek8 (ENSTRUG00000005563) traf4a (ENSTRUG00000020367) tada2a (ENSTRUG00000004933) #22 SYNRG (ENSTRUG00000004428) #24 hnf1ba (ENSTRUG00000003809) #27 ENSTRUG00000025163 dynll2a (ENSTRUG00000025275) srsf1a (ENSTRUG00000003691) aldoca (ENSTRUG00000002712) RSKR (ENSTRUG00000021516) BLTP2 (ENSTRUG00000001972) glod4 (ENSTRUG00000027113) ENSTRUG00000001557 nxn (ENSTRUG00000001410) txndc17 (ENSTRUG00000029139) ENSTRUG00000001161 PITPNM3 (ENSTRUG00000001051) ENSTRUG00000018013 Tiger tail seahorse MODERN SPECIES 517 ENSHCOG00000018373 tgfb1a (ENSHCOG00000018390) ppp5c (ENSHCOG00000018425) ENSHCOG00000018439 ENSHCOG00000018448 ENSHCOG00000018451 CLDN4 (ENSHCOG00000018558) cldne (ENSHCOG00000018565) ENSHCOG00000018582 ENSHCOG00000018590 sbds (ENSHCOG00000018606) ech1 (ENSHCOG00000018616) ENSHCOG00000018633 med17 (ENSHCOG00000018684) ENSHCOG00000018697 tada2a (ENSHCOG00000018758) #22 dusp14 (ENSHCOG00000018781) SYNRG (ENSHCOG00000018811) #24 hnf1ba (ENSHCOG00000018878) #27 ENSHCOG00000018898 dynll2a (ENSHCOG00000018908) srsf1a (ENSHCOG00000018918) aldoca (ENSHCOG00000018942) ccdc9 (ENSHCOG00000018956) ENSHCOG00000018997 ENSHCOG00000019015 eml2 (ENSHCOG00000019047) ENSHCOG00000019094 ENSHCOG00000019136 ENSHCOG00000019142 irf2bp1 (ENSHCOG00000019150) Pinecone sodierfish MODERN SPECIES 4 or91a3 (ENSMMDG00005001995) P4HA3 (ENSMMDG00005001909) ENSMMDG00005001885 ENSMMDG00005001879 camkk1b (ENSMMDG00005001380) YWHAG (ENSMMDG00005001345) ca4b (ENSMMDG00005001328) dhrs11b.1 (ENSMMDG00005001275) #14 SUPT6H (ENSMMDG00005001236) ENSMMDG00005001223 zgc:174895 (ENSMMDG00005001216) rab34a (ENSMMDG00005001174) tlcd1 (ENSMMDG00005013145) nek8 (ENSMMDG00005013131) traf4a (ENSMMDG00005013113) tada2a (ENSMMDG00005012499) #22 dusp14 (ENSMMDG00005012486) SYNRG (ENSMMDG00005012466) #24 ENSMMDG00005012438 hnf1ba (ENSMMDG00005012416) #27 ENSMMDG00005012412 dynll2a (ENSMMDG00005012411) srsf1a (ENSMMDG00005012402) aldoca (ENSMMDG00005012399) ENSMMDG00005012397 BLTP2 (ENSMMDG00005012392) ENSMMDG00005012381 glod4 (ENSMMDG00005012375) mrm3a (ENSMMDG00005012369) nxn (ENSMMDG00005012349) txndc17 (ENSMMDG00005012345) Cod MODERN SPECIES 7 ENSGMOG00000016376 ENSGMOG00000016334 ENSGMOG00000033784 ENSGMOG00000016303 ENSGMOG00000033681 ENSGMOG00000016273 ENSGMOG00000008769 #14 SUPT6H (ENSGMOG00000018068) ENSGMOG00000034768 ENSGMOG00000032139 zgc:174895 (ENSGMOG00000035207) rab34a (ENSGMOG00000016238) TLCD1 (ENSGMOG00000034933) nek8 (ENSGMOG00000016185) traf4a (ENSGMOG00000032539) tada2a (ENSGMOG00000016136) #22 dusp14 (ENSGMOG00000020333) ENSGMOG00000023208 #24 hnf1ba (ENSGMOG00000016065) #27 ENSGMOG00000027748 il12a (ENSGMOG00000036905) ENSGMOG00000000854 ENSGMOG00000024280 MFSD1 (ENSGMOG00000013718) ENSGMOG00000013738 ENSGMOG00000032509 p2ry12 (ENSGMOG00000035055) ENSGMOG00000029920 AADAC (ENSGMOG00000035494) ENSGMOG00000026155 MBNL1 (ENSGMOG00000013842) Reedfish MODERN SPECIES 16 ENSECRG00000006586 ESYT3 (ENSECRG00000006598) ENSECRG00000006617 ENSECRG00000006625 ENSECRG00000006627 ENSECRG00000006631 SDF2 (ENSECRG00000006641) supt6h (ENSECRG00000006652) ENSECRG00000006671 zgc:174895 (ENSECRG00000006680) rab34a (ENSECRG00000006692) rpl23a (ENSECRG00000006703) tlcd1 (ENSECRG00000006711) nek8 (ENSECRG00000006728) traf4a (ENSECRG00000006750) tada2a (ENSECRG00000006769) #22 dusp14 (ENSECRG00000006794) SYNRG (ENSECRG00000006830) #24 ddx52 (ENSECRG00000006893) #25 hnf1ba (ENSECRG00000006911) #27 heatr6 (ENSECRG00000006936) #28 ENSECRG00000006953 dynll1 (ENSECRG00000006963) srsf1a (ENSECRG00000006972) pigs (ENSECRG00000007000) aldoca (ENSECRG00000007055) ENSECRG00000007075 BLTP2 (ENSECRG00000007118) glod4 (ENSECRG00000007140) mrm3b (ENSECRG00000007153) nxn (ENSECRG00000007158)