Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00910000148704	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36
Primates	ANCESTRAL SPECIES	3	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00910000148704	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00940000166945	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00910000148704	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT00940000165476 #30	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00910000148704	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT01100000263482.C.c.a.i ##29	ENSGT01100000263482.C.c.b.b.a.b.a ##29	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT00940000165476 #30	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT00940000161690 #34	ENSGT00390000018397 #35
Catarrhini	ANCESTRAL SPECIES	8	ENSGT01050000245374	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00910000148704	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT01100000263482.C.c.a.i ##29	ENSGT01100000263482.C.c.b.b.a.b.a.a ##29	ENSGT01050000245362	ENSGT01100000263482.C.c.a.j.b ##29	ENSGT01100000263482.C.c.b.b.a.b.a.b ##29	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.a.b.a.h ##29	ENSGT01100000263482.C.c.b.a.b.a.g #31	ENSGT01100000263482.C.c.b.a.b.b #32
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT01050000245374	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00910000148704	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT01100000263482.C.c.a.i ##29	ENSGT01100000263482.C.c.b.b.a.b.a.a ##29	ENSGT01050000245362	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.a.b.a.h ##29	ENSGT01100000263482.C.c.b.a.b.a.g #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT00940000161690 #34
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000155797 #12	ENSGT01050000245374	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822.o #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b ##29	ENSGT01100000263482.C.c.a.i.d ##29	ENSGT00520000060616	ENSGT00390000016675 #28	ENSGT01100000263482.C.c.a.i.c.a ##29	ENSGT00940000163624	ENSGT01100000263482.C.c.a.i.c.b ##29	ENSGT01100000263482.C.c.b.b.a.b.a.a.c.a ##29	ENSGT01050000245362	ENSGT01100000263482.C.c.b.b.a.b.a.a.d ##29	ENSGT01100000263482.C.c.b.b.a.b.b #29
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000155797 #12	ENSGT01050000245374	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822.o #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b ##29	ENSGT01100000263482.C.c.a.i.d ##29	ENSGT00520000060616	ENSGT00390000016675 #28	ENSGT01100000263482.C.c.a.i.c.a ##29	ENSGT00940000163624	ENSGT01100000263482.C.c.a.i.c.b ##29	ENSGT01100000263482.C.c.b.b.a.b.a.a.c.a ##29	ENSGT01050000245362	ENSGT01100000263482.C.c.b.b.a.b.a.a.d ##29	ENSGT01100000263482.C.c.b.b.a.b.b #29
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT01050000245374	ENSGT00940000155690 #13	ENSGT00390000010822.o #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016384.f.j.b #27	ENSGT00390000016675 #28	ENSGT01100000263482.C.c.a.i.c.a ##29
Olive baboon	MODERN SPECIES	8	BCAS3 (ENSPANG00000022159) #7	ENSPANG00000008797 #8	PPM1D (ENSPANG00000022160) #9	APPBP2 (ENSPANG00000022164) #10	CHCT1 (ENSPANG00000022167) #11	ENSPANG00000022153 #12	CA4 (ENSPANG00000022142) #13	ZNHIT3 (ENSPANG00000050701) #14	MYO19 (ENSPANG00000022136) #15	PIGW (ENSPANG00000008702) #16	GGNBP2 (ENSPANG00000022124) #17	LHX1 (ENSPANG00000022127) #18	AATF (ENSPANG00000022128) #19	ENSPANG00000047347 #20	ACACA (ENSPANG00000022130) #21	TADA2A (ENSPANG00000022118) #22	DUSP14 (ENSPANG00000003448) #23	SYNRG (ENSPANG00000022120) #24	DDX52 (ENSPANG00000022101) #25	HNF1B (ENSPANG00000022102) #26	ENSPANG00000032216 #27	HEATR6 (ENSPANG00000009798) #28	CCL18 (ENSPANG00000041083) #29	ENSPANG00000022938 #30	CCL15 (ENSPANG00000022937) #31	CCL14 (ENSPANG00000022936) #32	CCL16 (ENSPANG00000022935) #33	LYZL6 (ENSPANG00000022934) #34	RDM1 (ENSPANG00000022933) #35	ENSPANG00000030339 #36	HEATR9 (ENSPANG00000022932) #37
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT01050000245374	ENSGT00940000155690 #13	ENSGT00390000010822.o #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26
Sooty mangabey	MODERN SPECIES	617	ENSCATG00000030236 #12	ENSCATG00000040911	CA4 (ENSCATG00000034309) #13	ZNHIT3 (ENSCATG00000035385) #14	MYO19 (ENSCATG00000042003) #15	PIGW (ENSCATG00000007447) #16	GGNBP2 (ENSCATG00000030797) #17	DHRS11 (ENSCATG00000001680)	MRM1 (ENSCATG00000041516)	ENSCATG00000044337	LHX1 (ENSCATG00000035824) #18	AATF (ENSCATG00000043611) #19	ACACA (ENSCATG00000036167) #21	ENSCATG00000021273	C17orf78 (ENSCATG00000037239) #20	TADA2A (ENSCATG00000030086) #22	DUSP14 (ENSCATG00000043837) #23	SYNRG (ENSCATG00000031190) #24	DDX52 (ENSCATG00000041437) #25	HNF1B (ENSCATG00000045086) #26
Drill	MODERN SPECIES	1036	APPBP2 (ENSMLEG00000039106) #10	CHCT1 (ENSMLEG00000044109) #11	ENSMLEG00000038481	ENSMLEG00000042806 #12	CA4 (ENSMLEG00000034715) #13	ZNHIT3 (ENSMLEG00000041589) #14	MYO19 (ENSMLEG00000035545) #15	GGNBP2 (ENSMLEG00000041128) #17	DHRS11 (ENSMLEG00000028362)	MRM1 (ENSMLEG00000031933)	ENSMLEG00000033898	LHX1 (ENSMLEG00000030942) #18	AATF (ENSMLEG00000033672) #19	C17orf78 (ENSMLEG00000032526) #20	ACACA (ENSMLEG00000028181) #21	TADA2A (ENSMLEG00000034264) #22	DUSP14 (ENSMLEG00000037053) #23	SYNRG (ENSMLEG00000037827) #24	DDX52 (ENSMLEG00000017518) #25	HNF1B (ENSMLEG00000028966) #26	ENSMLEG00000044192 #27	ENSMLEG00000036090
Macaca	ANCESTRAL SPECIES	4	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822.o #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b.a ##29	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.a.b.a.h ##29	ENSGT01100000263482.C.c.b.a.b.a.g #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT00940000161690 #34	ENSGT00390000018397 #35	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Pig-tailed macaque	MODERN SPECIES	541	ENSMNEG00000042038 #12	ENSMNEG00000042229	ENSMNEG00000038726	CA4 (ENSMNEG00000037240) #13	ZNHIT3 (ENSMNEG00000031757) #14	MYO19 (ENSMNEG00000043092) #15	PIGW (ENSMNEG00000010275) #16	GGNBP2 (ENSMNEG00000036757) #17	DHRS11 (ENSMNEG00000029082)	MRM1 (ENSMNEG00000044557)	ENSMNEG00000033194	LHX1 (ENSMNEG00000036471) #18	AATF (ENSMNEG00000041026) #19	ACACA (ENSMNEG00000043362) #21	C17orf78 (ENSMNEG00000036519) #20	TADA2A (ENSMNEG00000038569) #22	DUSP14 (ENSMNEG00000009880) #23	SYNRG (ENSMNEG00000026198) #24	DDX52 (ENSMNEG00000043658) #25	HNF1B (ENSMNEG00000037389) #26
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822.o #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b.b ##29	ENSGT01100000263482.C.c.a.i.d.b ##29	ENSGT00520000060616	ENSGT00390000016675 #28	ENSGT01100000263482.C.c.b.b.a.b.a.a.c.b.a ##29	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT00940000165476 #30	ENSGT01100000263482.C.c.b.a.b.a.g #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT00940000161690 #34
Crab-eating macaque	MODERN SPECIES	7	APPBP2 (ENSMFAG00000031643) #10	CHCT1 (ENSMFAG00000001841) #11	ENSMFAG00000060869	ENSMFAG00000058900	ENSMFAG00000042248 #12	ENSMFAG00000032685 #13	ZNHIT3 (ENSMFAG00000001234) #14	MYO19 (ENSMFAG00000033731) #15	PIGW (ENSMFAG00000036468) #16	ENSMFAG00000064927	ENSMFAG00000044208	ENSMFAG00000056392	LHX1 (ENSMFAG00000001746) #18	AATF (ENSMFAG00000003108) #19	ACACA (ENSMFAG00000045655) #21	TADA2A (ENSMFAG00000046352) #22	ENSMFAG00000061442	DUSP14 (ENSMFAG00000010455) #23	SYNRG (ENSMFAG00000044562) #24	ENSMFAG00000030603 #26	DDX52 (ENSMFAG00000000640) #25	ENSMFAG00000058779 #26	ENSMFAG00000051245	ENSMFAG00000063676	ENSMFAG00000060658	ENSMFAG00000052110	ENSMFAG00000053936 ##29	ENSMFAG00000047776 ##29	ENSMFAG00000057148	ENSMFAG00000060965 #28	ENSMFAG00000029679 #28
Rhesus	MODERN SPECIES	7	CHCT1 (ENSMMUG00000016565) #11	ENSMMUG00000052977	ENSMMUG00000017113 #12	CA4 (ENSMMUG00000007917) #13	ZNHIT3 (ENSMMUG00000007918) #14	PIGW (ENSMMUG00000007923) #16	MYO19 (ENSMMUG00000007920) #15	GGNBP2 (ENSMMUG00000000618) #17	DHRS11 (ENSMMUG00000000620)	ENSMMUG00000053397	ENSMMUG00000063397	LHX1 (ENSMMUG00000021668) #18	AATF (ENSMMUG00000021669) #19	ACACA (ENSMMUG00000009349) #21	C16H17orf78 (ENSMMUG00000030090) #20	TADA2A (ENSMMUG00000021911) #22	DUSP14 (ENSMMUG00000002975) #23	SYNRG (ENSMMUG00000002976) #24	DDX52 (ENSMMUG00000002980) #25	HNF1B (ENSMMUG00000003431) #26	ENSMMUG00000061594	ENSMMUG00000058233 ##29	HEATR6 (ENSMMUG00000007671) #28	ENSMMUG00000030260	ENSMMUG00000062497	ENSMMUG00000050758	ENSMMUG00000008111 ##29	CCL3 (ENSMMUG00000062832) ##29	CCL18 (ENSMMUG00000047114) #29	CCL23 (ENSMMUG00000002467) #30	CCL15 (ENSMMUG00000039864) #31
Vervet Monkey	MODERN SPECIES	7	PPM1D (ENSCSAG00000005981) #9	APPBP2 (ENSCSAG00000005988) #10	CHCT1 (ENSCSAG00000005993) #11	ENSCSAG00000006004 #12	CA4 (ENSCSAG00000006017) #13	ENSCSAG00000006027 ##14	MYO19 (ENSCSAG00000006037) #15	PIGW (ENSCSAG00000000554) #16	GGNBP2 (ENSCSAG00000006044) #17	DHRS11 (ENSCSAG00000006049)	MRM1 (ENSCSAG00000006055)	LHX1 (ENSCSAG00000006059) #18	AATF (ENSCSAG00000006066) #19	ACACA (ENSCSAG00000006092) #21	C17orf78 (ENSCSAG00000006103) #20	TADA2A (ENSCSAG00000006109) #22	DUSP14 (ENSCSAG00000000555) #23	SYNRG (ENSCSAG00000006116) #24	DDX52 (ENSCSAG00000006122) #25	HNF1B (ENSCSAG00000006125) #26	ENSCSAG00000006128 ##29	ENSCSAG00000006135 ##29	HEATR6 (ENSCSAG00000006142) #28	ENSCSAG00000006165	ENSCSAG00000006185	ENSCSAG00000006191 ##29	CCL18 (ENSCSAG00000006194) #29	CCL15 (ENSCSAG00000006198) #31	CCL14 (ENSCSAG00000006201) #32	CCL16 (ENSCSAG00000006203) #33	LYZL6 (ENSCSAG00000006206) #34
Rhinopithecus	ANCESTRAL SPECIES	152	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00910000148704	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26
Golden snub-nosed monkey	MODERN SPECIES	2002					ZNHIT3 (ENSRROG00000033230) #14	MYO19 (ENSRROG00000034127) #15	PIGW (ENSRROG00000004329) #16	GGNBP2 (ENSRROG00000044404) #17	DHRS11 (ENSRROG00000037749)	MRM1 (ENSRROG00000041704)	ENSRROG00000030991	LHX1 (ENSRROG00000028716) #18	AATF (ENSRROG00000037297) #19	C17orf78 (ENSRROG00000029539) #20	ACACA (ENSRROG00000033447) #21	TADA2A (ENSRROG00000043169) #22	DUSP14 (ENSRROG00000019792) #23	SYNRG (ENSRROG00000040002) #24	DDX52 (ENSRROG00000034760) #25	HNF1B (ENSRROG00000025399) #26
Black snub-nosed monkey	MODERN SPECIES	2533													ENSRBIG00000027665 #21	ENSRBIG00000038798	C17orf78 (ENSRBIG00000032290) #20	TADA2A (ENSRBIG00000028840) #22	DUSP14 (ENSRBIG00000027666) #23	SYNRG (ENSRBIG00000042474) #24	DDX52 (ENSRBIG00000032462) #25	HNF1B (ENSRBIG00000034188) #26
Hominoidea	ANCESTRAL SPECIES	36				ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00950000183120.e.b.a.b	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26
Hominidae	ANCESTRAL SPECIES	34				ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00950000183120.e.b.a.b	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##29	ENSGT01100000263482.C.c.a.j.a ##29	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00950000183120.e.b.a.b	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00940000163624	ENSGT00940000155246.j.b.b	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314	ENSGT00940000157982.b	ENSGT00860000135964	ENSGT00940000157961.C	ENSGT00940000153451.a.a.a	ENSGT00940000158572	ENSGT00550000076427
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##29	ENSGT01100000263482.C.c.a.j.a ##29	ENSGT00940000163624	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00940000155246.j.b.b	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314	ENSGT00940000157982.b	ENSGT00860000135964	ENSGT00940000157961.C	ENSGT00940000153451.a.a.a	ENSGT00940000158572	ENSGT00550000076427	ENSGT00390000004574
Pan	ANCESTRAL SPECIES	3	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##29	ENSGT01100000263482.C.c.a.j.a ##29	ENSGT00940000163624	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00910000146895	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00910000146738	ENSGT00940000155246.j.b.b	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314	ENSGT00940000157982.b	ENSGT00860000135964	ENSGT00940000157961.C	ENSGT00940000153451.a.a.a	ENSGT00940000158572	ENSGT00550000076427
Bonobo	MODERN SPECIES	8	CCL23 (ENSPPAG00000032672) ##29	CCL18 (ENSPPAG00000038398) #29	ENSPPAG00000000041 ##29	CCL4 (ENSPPAG00000014523) ##29	ZNHIT3 (ENSPPAG00000007469) #14	MYO19 (ENSPPAG00000034137) #15	PIGW (ENSPPAG00000025159) #16	GGNBP2 (ENSPPAG00000011629) #17	DHRS11 (ENSPPAG00000030903)	MRM1 (ENSPPAG00000043135)	ENSPPAG00000037724	LHX1 (ENSPPAG00000040860) #18	AATF (ENSPPAG00000041330) #19	C17orf78 (ENSPPAG00000040040) #20	ACACA (ENSPPAG00000041732) #21	TADA2A (ENSPPAG00000041725) #22	DUSP14 (ENSPPAG00000015794) #23	SYNRG (ENSPPAG00000032385) #24	DDX52 (ENSPPAG00000028453) #25	HNF1B (ENSPPAG00000040900) #26	ENSPPAG00000035466	ENSPPAG00000032841	GPR179 (ENSPPAG00000039490)	SOCS7 (ENSPPAG00000027368)	ENSPPAG00000033631	ENSPPAG00000030363	SRCIN1 (ENSPPAG00000030318)	MLLT6 (ENSPPAG00000043999)	ENSPPAG00000006335	CISD3 (ENSPPAG00000033971)	PCGF2 (ENSPPAG00000038230)
Chimpanzee	MODERN SPECIES	8	CCL18 (ENSPTRG00000009037) #29	CCL3 (ENSPTRG00000009039) ##29	CCL4 (ENSPTRG00000030907) ##29	ENSPTRG00000008852	ZNHIT3 (ENSPTRG00000009043) #14	MYO19 (ENSPTRG00000009044) #15	PIGW (ENSPTRG00000030908) #16	GGNBP2 (ENSPTRG00000009046) #17	DHRS11 (ENSPTRG00000009048)	MRM1 (ENSPTRG00000009049)	ENSPTRG00000052647	LHX1 (ENSPTRG00000009050) #18	AATF (ENSPTRG00000009051) #19	C17H17orf78 (ENSPTRG00000009053) #20	ACACA (ENSPTRG00000009052) #21	TADA2A (ENSPTRG00000009054) #22	DUSP14 (ENSPTRG00000050415) #23	SYNRG (ENSPTRG00000009057) #24	DDX52 (ENSPTRG00000009058) #25	HNF1B (ENSPTRG00000009059) #26	ENSPTRG00000044704	TBC1D3B (ENSPTRG00000034386)	ENSPTRG00000043187 ##29	ENSPTRG00000045727 ##29	ENSPTRG00000043472	MRPL45 (ENSPTRG00000009065)	GPR179 (ENSPTRG00000009067)	SOCS7 (ENSPTRG00000051106)	ARHGAP23 (ENSPTRG00000050966)	ENSPTRG00000051759	SRCIN1 (ENSPTRG00000009070)
Human	MODERN SPECIES	8	CCL4L2 (ENSG00000276070) ##29	TBC1D3I (ENSG00000274933)	TBC1D3G (ENSG00000260287)	TBC1D3H (ENSG00000274226)	TBC1D3F (ENSG00000275954)	ZNHIT3 (ENSG00000273611) #14	MYO19 (ENSG00000278259) #15	PIGW (ENSG00000277161) #16	GGNBP2 (ENSG00000278311) #17	DHRS11 (ENSG00000278535)	MRM1 (ENSG00000278619)	LHX1 (ENSG00000273706) #18	AATF (ENSG00000275700) #19	ACACA (ENSG00000278540) #21	C17orf78 (ENSG00000278505) #20	TADA2A (ENSG00000276234) #22	DUSP14 (ENSG00000276023) #23	SYNRG (ENSG00000275066) #24	DDX52 (ENSG00000278053) #25	HNF1B (ENSG00000275410) #26	TBC1D3K (ENSG00000273513)	TBC1D3L (ENSG00000274512)	TBC1D3D (ENSG00000274419)	TBC1D3C (ENSG00000278299)	TBC1D3E (ENSG00000278599)	TBC1D3 (ENSG00000274611)	MRPL45 (ENSG00000278845)	GPR179 (ENSG00000277399)	SOCS7 (ENSG00000274211)	ARHGAP23 (ENSG00000275832)	SRCIN1 (ENSG00000277363)
Gorilla	MODERN SPECIES	18	CCL3L1 (ENSGGOG00000028175) ##29	ENSGGOG00000038575	ENSGGOG00000024272	ZNHIT3 (ENSGGOG00000007927) #14	MYO19 (ENSGGOG00000007933) #15	PIGW (ENSGGOG00000007951) #16	GGNBP2 (ENSGGOG00000007954) #17	DHRS11 (ENSGGOG00000007970)	MRM1 (ENSGGOG00000007979)	ENSGGOG00000039741	LHX1 (ENSGGOG00000002703) #18	AATF (ENSGGOG00000002706) #19	ENSGGOG00000042317	ACACA (ENSGGOG00000017078) #21	ENSGGOG00000006354 #20	TADA2A (ENSGGOG00000012176) #22	DUSP14 (ENSGGOG00000040591) #23	SYNRG (ENSGGOG00000040471) #24	DDX52 (ENSGGOG00000028224) #25	HNF1B (ENSGGOG00000006322) #26	ENSGGOG00000022575	ENSGGOG00000043270	ENSGGOG00000013691	ENSGGOG00000027359	ENSGGOG00000025025	GPR179 (ENSGGOG00000010947)	ENSGGOG00000010961	ARHGAP23 (ENSGGOG00000011104)	ENSGGOG00000042036	SRCIN1 (ENSGGOG00000005635)	EPOP (ENSGGOG00000009275)
Orangutan	MODERN SPECIES	8	BCAS3 (ENSPPYG00000008797) #7	PPM1D (ENSPPYG00000008517) #9	APPBP2 (ENSPPYG00000008516) #10	ENSPPYG00000037147	CHCT1 (ENSPPYG00000008515) #11	ENSPPYG00000008513	MYO19 (ENSPPYG00000008211) #15	ZNHIT3 (ENSPPYG00000008210) #14	ENSPPYG00000030234 #17	DHRS11 (ENSPPYG00000008213)	MRM1 (ENSPPYG00000034525)	LHX1 (ENSPPYG00000008214) #18	AATF (ENSPPYG00000008215) #19	ENSPPYG00000008217 #20	ACACA (ENSPPYG00000008216) #21	TADA2A (ENSPPYG00000008218) #22	DUSP14 (ENSPPYG00000008219) #23	SYNRG (ENSPPYG00000008220) #24	DDX52 (ENSPPYG00000008221) #25	HNF1B (ENSPPYG00000008222) #26	ENSPPYG00000034866	ENSPPYG00000033195	ENSPPYG00000008205 ##29	CCL3 (ENSPPYG00000038679) ##29	CCL18 (ENSPPYG00000008203) #29	CCL23 (ENSPPYG00000008202) ##29	CCL15 (ENSPPYG00000041781) #31	ENSPPYG00000040512 #32	CCL16 (ENSPPYG00000008200) #33	LYZL6 (ENSPPYG00000008199) #34	RDM1 (ENSPPYG00000008198) #35
Gibbon	MODERN SPECIES	104	ENSNLEG00000002060	ENSNLEG00000033541	ENSNLEG00000035947	ZNHIT3 (ENSNLEG00000002070) #14	MYO19 (ENSNLEG00000002087) #15	GGNBP2 (ENSNLEG00000002197) #17	ENSNLEG00000028425	DHRS11 (ENSNLEG00000002259)	MRM1 (ENSNLEG00000002300)	ENSNLEG00000034926	LHX1 (ENSNLEG00000002343) #18	AATF (ENSNLEG00000002354) #19	ACACA (ENSNLEG00000002421) #21	ENSNLEG00000033322	C17orf78 (ENSNLEG00000002618) #20	TADA2A (ENSNLEG00000002646) #22	DUSP14 (ENSNLEG00000002727) #23	SYNRG (ENSNLEG00000002737) #24	DDX52 (ENSNLEG00000002826) #25	HNF1B (ENSNLEG00000002919) #26
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520.c #16	ENSGT00390000009552 #17	ENSGT00840000129887.c	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.b.a.b.a ##29	ENSGT00940000165089	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT00940000161690 #34	ENSGT00390000018397 #35	ENSGT01100000263482.D #36
Cebidae	ANCESTRAL SPECIES	10	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520.c #16	ENSGT00390000009552 #17	ENSGT00840000129887.c	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.b.a.b.a ##29	ENSGT00940000165089	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT00940000161690 #34	ENSGT00390000018397 #35	ENSGT01100000263482.D #36	ENSGT00390000007247 #37
Marmoset	MODERN SPECIES	17	APPBP2 (ENSCJAG00000043808) #10	ENSCJAG00000080142	CHCT1 (ENSCJAG00000001176) #11	ENSCJAG00000001104 #12	CA4 (ENSCJAG00000011248) #13	ENSCJAG00000080872	ZNHIT3 (ENSCJAG00000001093) #14	MYO19 (ENSCJAG00000001068) #15	PIGW (ENSCJAG00000023386) #16	GGNBP2 (ENSCJAG00000001044) #17	DHRS11 (ENSCJAG00000001031)	MRM1 (ENSCJAG00000001023)	ENSCJAG00000015449 #18	ACACA (ENSCJAG00000015336) #21	ENSCJAG00000015436 #20	TADA2A (ENSCJAG00000015275) #22	DUSP14 (ENSCJAG00000039500) #23	SYNRG (ENSCJAG00000015209) #24	ENSCJAG00000079150	DDX52 (ENSCJAG00000015190) #25	HNF1B (ENSCJAG00000015174) #26	HEATR6 (ENSCJAG00000015089) #28	ENSCJAG00000055053	ENSCJAG00000015069 ##29	ENSCJAG00000039948	ENSCJAG00000063189 #31	CCL16 (ENSCJAG00000015050) #33	LYZL6 (ENSCJAG00000015046) #34	RDM1 (ENSCJAG00000015031) #35	ENSCJAG00000061679	ENSCJAG00000065875 #36
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000165945	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520.c #16	ENSGT00390000009552 #17	ENSGT00840000129887.c	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT01100000263482.C.c.b.b.a.b.b #29	ENSGT01100000263482.C.c.b.b.a.b.a ##29	ENSGT00940000165089	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT00940000161690 #34	ENSGT00390000018397 #35	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Bolivian squirrel monkey	MODERN SPECIES	74	CHCT1 (ENSSBOG00000034515) #11	ENSSBOG00000005431	ENSSBOG00000019247	ENSSBOG00000020205 #12	CA4 (ENSSBOG00000029608) #13	ZNHIT3 (ENSSBOG00000027184) #14	MYO19 (ENSSBOG00000026064) #15	GGNBP2 (ENSSBOG00000022817) #17	DHRS11 (ENSSBOG00000018252)	MRM1 (ENSSBOG00000024145)	LHX1 (ENSSBOG00000025624) #18	AATF (ENSSBOG00000026894) #19	ACACA (ENSSBOG00000000679) #21	ENSSBOG00000028931	C17orf78 (ENSSBOG00000028531) #20	TADA2A (ENSSBOG00000012961) #22	DUSP14 (ENSSBOG00000013797) #23	SYNRG (ENSSBOG00000026903) #24	DDX52 (ENSSBOG00000035787) #25	HNF1B (ENSSBOG00000029637) #26	HEATR6 (ENSSBOG00000022182) #28	ENSSBOG00000028016 #29	ENSSBOG00000027438 ##29	ENSSBOG00000008746	ENSSBOG00000033067	ENSSBOG00000023104	ENSSBOG00000023945	CCL14 (ENSSBOG00000034435) #32	CCL16 (ENSSBOG00000025408) #33	LYZL6 (ENSSBOG00000029469) #34	RDM1 (ENSSBOG00000028130) #35
Capuchin	MODERN SPECIES	121	C17orf64 (ENSCCAG00000034964) #11	ENSCCAG00000020765 #12	ENSCCAG00000013670	CA4 (ENSCCAG00000021031) #13	ZNHIT3 (ENSCCAG00000021492) #14	MYO19 (ENSCCAG00000029401) #15	ENSCCAG00000030379 #16	GGNBP2 (ENSCCAG00000020660) #17	DHRS11 (ENSCCAG00000037890)	MRM1 (ENSCCAG00000020032)	LHX1 (ENSCCAG00000035551) #18	AATF (ENSCCAG00000004696) #19	ACACA (ENSCCAG00000020124) #21	C17orf78 (ENSCCAG00000024629) #20	ENSCCAG00000035309	TADA2A (ENSCCAG00000007308) #22	DUSP14 (ENSCCAG00000019407) #23	SYNRG (ENSCCAG00000028418) #24	DDX52 (ENSCCAG00000023213) #25	HNF1B (ENSCCAG00000019903) #26	HEATR6 (ENSCCAG00000034260) #28	ENSCCAG00000035930 ##29	ENSCCAG00000021764	CCL14 (ENSCCAG00000024175) #32	ENSCCAG00000024194 #34	ENSCCAG00000037920	ENSCCAG00000034491
Mas night monkey	MODERN SPECIES	805	CHCT1 (ENSANAG00000027029) #11	ENSANAG00000020996 #12	ENSANAG00000032912	CA4 (ENSANAG00000031964) #13	ZNHIT3 (ENSANAG00000026827) #14	MYO19 (ENSANAG00000029214) #15	GGNBP2 (ENSANAG00000020222) #17	ENSANAG00000038031	MRM1 (ENSANAG00000025500)	LHX1 (ENSANAG00000033720) #18	AATF (ENSANAG00000035007) #19	ENSANAG00000027412	C17orf78 (ENSANAG00000034785) #20	ACACA (ENSANAG00000035253) #21	ENSANAG00000031287	TADA2A (ENSANAG00000023226) #22	DUSP14 (ENSANAG00000030312) #23	SYNRG (ENSANAG00000033433) #24	DDX52 (ENSANAG00000028587) #25	HNF1B (ENSANAG00000025408) #26	HEATR6 (ENSANAG00000034625) #28	ENSANAG00000036612 #29	ENSANAG00000020518 ##29	CCL4L2 (ENSANAG00000032119) ##29	ENSANAG00000038290 #31	CCL14 (ENSANAG00000034460) #32	CCL16 (ENSANAG00000024769) #33	LYZL6 (ENSANAG00000034516) #34	RDM1 (ENSANAG00000032752) #35	ENSANAG00000038037 #36	HEATR9 (ENSANAG00000034198) #37
Tarsier	MODERN SPECIES	5980										DHRS11 (ENSTSYG00000011826)	MRM1 (ENSTSYG00000036380)	LHX1 (ENSTSYG00000025930) #18	AATF (ENSTSYG00000000789) #19	ACACA (ENSTSYG00000007665) #21	C17orf78 (ENSTSYG00000005128) #20	TADA2A (ENSTSYG00000002124) #22	DUSP14 (ENSTSYG00000000249) #23	SYNRG (ENSTSYG00000000250) #24	DDX52 (ENSTSYG00000002996) #25	HNF1B (ENSTSYG00000010701) #26	HEATR6 (ENSTSYG00000009632) #28
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00940000166945	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00940000166945	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36
Mouse lemur	MODERN SPECIES	7	PPM1D (ENSMICG00000014711) #9	APPBP2 (ENSMICG00000030699) #10	CHCT1 (ENSMICG00000013434) #11	ENSMICG00000013391 #12	CA4 (ENSMICG00000013382) #13	ENSMICG00000045176	ZNHIT3 (ENSMICG00000041948) #14	MYO19 (ENSMICG00000004193) #15	GGNBP2 (ENSMICG00000004202) #17	DHRS11 (ENSMICG00000004210)	MRM1 (ENSMICG00000004216)	LHX1 (ENSMICG00000046353) #18	AATF (ENSMICG00000004226) #19	ACACA (ENSMICG00000004237) #21	C17orf78 (ENSMICG00000029913) #20	TADA2A (ENSMICG00000004263) #22	DUSP14 (ENSMICG00000029118) #23	SYNRG (ENSMICG00000004272) #24	ENSMICG00000004290 #25	HNF1B (ENSMICG00000001274) #26	HEATR6 (ENSMICG00000008703) #28	ENSMICG00000041554 ##29	ENSMICG00000008737 ##29	ENSMICG00000038715 ##29	ENSMICG00000042571 #31	ENSMICG00000029419 #31	CCL14 (ENSMICG00000027552) #32	CCL16 (ENSMICG00000029697) #33	ENSMICG00000042451 #36	HEATR9 (ENSMICG00000001796) #37	TAF15 (ENSMICG00000017057)
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00940000166945	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT00390000018505.b.j
Coquerels sifaka	MODERN SPECIES	414	ENSPCOG00000022756	PPM1D (ENSPCOG00000023590) #9	APPBP2 (ENSPCOG00000023992) #10	CHCT1 (ENSPCOG00000023733) #11	ENSPCOG00000026706 #12	CA4 (ENSPCOG00000017632) #13	ZNHIT3 (ENSPCOG00000013676) #14	MYO19 (ENSPCOG00000007949) #15	GGNBP2 (ENSPCOG00000007163) #17	DHRS11 (ENSPCOG00000013070)	MRM1 (ENSPCOG00000020871)	LHX1 (ENSPCOG00000020883) #18	AATF (ENSPCOG00000022113) #19	C17orf78 (ENSPCOG00000026279) #20	ACACA (ENSPCOG00000018915) #21	TADA2A (ENSPCOG00000012848) #22	DUSP14 (ENSPCOG00000008608) #23	SYNRG (ENSPCOG00000006433) #24	ENSPCOG00000022004	HNF1B (ENSPCOG00000023250) #26	HEATR6 (ENSPCOG00000007339) #28	ENSPCOG00000026656 ##29	ENSPCOG00000017450 ##29	ENSPCOG00000018507 #31	CCL14 (ENSPCOG00000000123) #32	CCL16 (ENSPCOG00000015310) #33	ENSPCOG00000012531	ENSPCOG00000009360 #36	HEATR9 (ENSPCOG00000020659) #37	TAF15 (ENSPCOG00000007032)	MMP28 (ENSPCOG00000021300)
Greater bamboo lemur	MODERN SPECIES	59	PPM1D (ENSPSMG00000011798) #9	APPBP2 (ENSPSMG00000011771) #10	CHCT1 (ENSPSMG00000011749) #11	ENSPSMG00000011700 #12	CA4 (ENSPSMG00000011627) #13	ZNHIT3 (ENSPSMG00000011614) #14	MYO19 (ENSPSMG00000011604) #15	PIGW (ENSPSMG00000011565) #16	GGNBP2 (ENSPSMG00000011529) #17	DHRS11 (ENSPSMG00000011489)	MRM1 (ENSPSMG00000011470)	LHX1 (ENSPSMG00000011466) #18	AATF (ENSPSMG00000011456) #19	ACACA (ENSPSMG00000011387) #21	ENSPSMG00000011258 #20	TADA2A (ENSPSMG00000011223) #22	DUSP14 (ENSPSMG00000011101) #23	SYNRG (ENSPSMG00000011045) #24	DDX52 (ENSPSMG00000010909) #25	HNF1B (ENSPSMG00000010872) #26
Bushbaby	MODERN SPECIES	209	CHCT1 (ENSOGAG00000006794) #11	ENSOGAG00000028737	ENSOGAG00000003441 #12	CA4 (ENSOGAG00000003438) #13	ENSOGAG00000031465	ZNHIT3 (ENSOGAG00000005605) #14	MYO19 (ENSOGAG00000024228) #15	PIGW (ENSOGAG00000029683) #16	GGNBP2 (ENSOGAG00000013777) #17	DHRS11 (ENSOGAG00000013780)	MRM1 (ENSOGAG00000013785)	LHX1 (ENSOGAG00000013789) #18	AATF (ENSOGAG00000013792) #19	ACACA (ENSOGAG00000013795) #21	C17orf78 (ENSOGAG00000013814) #20	TADA2A (ENSOGAG00000000866) #22	DUSP14 (ENSOGAG00000027765) #23	SYNRG (ENSOGAG00000000867) #24	DDX52 (ENSOGAG00000000868) #25	HNF1B (ENSOGAG00000000869) #26	HEATR6 (ENSOGAG00000008153) #28	ENSOGAG00000028390 ##29	ENSOGAG00000012746 ##29	ENSOGAG00000001316 #31	CCL14 (ENSOGAG00000027314) #32	CCL16 (ENSOGAG00000033836) #33	ENSOGAG00000011726 #36	HEATR9 (ENSOGAG00000011724) #37	TAF15 (ENSOGAG00000011719)	MMP28 (ENSOGAG00000011716)	GAS2L2 (ENSOGAG00000031874)
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36	ENSGT00390000007247 #37
Glires	ANCESTRAL SPECIES	3	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT00940000165476 #30	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT00940000165476 #30	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00960000187851	ENSGT00940000165476 #30	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596	ENSGT00390000007830	ENSGT00940000154849.a	ENSGT01060000250264
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00960000187851	ENSGT00940000166945	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT00940000165476 #30	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000153288.a.b.a.a	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT00390000010003.ab	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000153288.a.b.a.a	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT00390000010003.ab	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Squirrel	MODERN SPECIES	90	PPM1D (ENSSTOG00000021256) #9	APPBP2 (ENSSTOG00000011350) #10	CHCT1 (ENSSTOG00000003182) #11	ENSSTOG00000029070 #12	CA4 (ENSSTOG00000010432) #13	ZNHIT3 (ENSSTOG00000013559) #14	MYO19 (ENSSTOG00000013563) #15	PIGW (ENSSTOG00000034045) #16	GGNBP2 (ENSSTOG00000002398) #17	DHRS11 (ENSSTOG00000002410)	MRM1 (ENSSTOG00000002422)	LHX1 (ENSSTOG00000022593) #18	AATF (ENSSTOG00000002458) #19	C17orf78 (ENSSTOG00000002508) #20	ACACA (ENSSTOG00000002468) #21	TADA2A (ENSSTOG00000002518) #22	DUSP14 (ENSSTOG00000002528) #23	SYNRG (ENSSTOG00000002530) #24	DDX52 (ENSSTOG00000002550) #25	HNF1B (ENSSTOG00000012440) #26	HEATR6 (ENSSTOG00000026901) #28	ENSSTOG00000032858	ENSSTOG00000013313 ##29	ENSSTOG00000027458 #29	ENSSTOG00000031610	ENSSTOG00000027899 #29	ENSSTOG00000034887 #31	CCL14 (ENSSTOG00000033490) #32	ENSSTOG00000015833 #36	HEATR9 (ENSSTOG00000028751) #37	TAF15 (ENSSTOG00000002081)
Arctic ground squirrel	MODERN SPECIES	193	PPM1D (ENSUPAG00010011169) #9	ENSUPAG00010011175	APPBP2 (ENSUPAG00010011180) #10	CHCT1 (ENSUPAG00010011193) #11	ENSUPAG00010011211 #12	CA4 (ENSUPAG00010011234) #13	ENSUPAG00010011238 #16	MYO19 (ENSUPAG00010011260) #15	GGNBP2 (ENSUPAG00010011289) #17	DHRS11 (ENSUPAG00010011375)	MRM1 (ENSUPAG00010011380)	LHX1 (ENSUPAG00010011394) #18	AATF (ENSUPAG00010011404) #19	ACACA (ENSUPAG00010011440) #21	C17orf78 (ENSUPAG00010011568) #20	TADA2A (ENSUPAG00010011582) #22	DUSP14 (ENSUPAG00010011617) #23	SYNRG (ENSUPAG00010011623) #24	DDX52 (ENSUPAG00010012034) #25	HNF1B (ENSUPAG00010012073) #26	HEATR6 (ENSUPAG00010012102) #28	ENSUPAG00010012127
Alpin marmot	MODERN SPECIES	42	ENSMMMG00000019748	APPBP2 (ENSMMMG00000019739) #10	CHCT1 (ENSMMMG00000019735) #11	ENSMMMG00000019716 #12	ENSMMMG00000019712 #13	ZNHIT3 (ENSMMMG00000019709) #14	MYO19 (ENSMMMG00000019686) #15	PIGW (ENSMMMG00000019680) #16	GGNBP2 (ENSMMMG00000019594) #17	DHRS11 (ENSMMMG00000019586)	MRM1 (ENSMMMG00000019574)	LHX1 (ENSMMMG00000019565) #18	ENSMMMG00000019558	ACACA (ENSMMMG00000019480) #21	C17orf78 (ENSMMMG00000019471) #20	TADA2A (ENSMMMG00000019464) #22	DUSP14 (ENSMMMG00000019458) #23	SYNRG (ENSMMMG00000019201) #24	DDX52 (ENSMMMG00000019175) #25	ENSMMMG00000019174	ENSMMMG00000019173	HNF1B (ENSMMMG00000019142) #26	HEATR6 (ENSMMMG00000019131) #28	ENSMMMG00000019129	ENSMMMG00000019125	ENSMMMG00000019119 ##29	ENSMMMG00000019116	ENSMMMG00000019105 #29	ENSMMMG00000019093 #29	ENSMMMG00000019090 #29	ENSMMMG00000019088
Eurasian red squirrel	MODERN SPECIES	12	APPBP2 (ENSSVLG00005007432) #10	CHCT1 (ENSSVLG00005007474) #11	ENSSVLG00005007515 #12	CA4 (ENSSVLG00005007650) #13	ZNHIT3 (ENSSVLG00005007716) #14	ENSSVLG00005007764 #15	PIGW (ENSSVLG00005007830) #16	GGNBP2 (ENSSVLG00005007850) #17	DHRS11 (ENSSVLG00005007894)	MRM1 (ENSSVLG00005007932)	LHX1 (ENSSVLG00005007965) #18	AATF (ENSSVLG00005008003) #19	ACACA (ENSSVLG00005008078) #21	ENSSVLG00005008470 #20	ENSSVLG00005008508	TADA2A (ENSSVLG00005008528) #22	ENSSVLG00005008610	SYNRG (ENSSVLG00005008671) #24	DDX52 (ENSSVLG00005008941) #25	HNF1B (ENSSVLG00005008984) #26	HEATR6 (ENSSVLG00005009203) #28	ENSSVLG00005009414	ENSSVLG00005009438	ENSSVLG00005009477 ##29	ENSSVLG00005009573 #29	ENSSVLG00005009611 #29	ENSSVLG00005009720 #30	ENSSVLG00005009747 #31	CCL14 (ENSSVLG00005009782) #32	CCL16 (ENSSVLG00005009830) #33	ENSSVLG00005009862 #36
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00940000166945	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.b ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000008032 #9	ENSHGLG00000045654	ENSHGLG00000050018	ENSHGLG00000009096 #12	ENSHGLG00000010334 #13	ENSHGLG00000034474 #14	ENSHGLG00000011039 #15	PIGW (ENSHGLG00000012822) #16	GGNBP2 (ENSHGLG00000013148) #17	DHRS11 (ENSHGLG00000035143)	MRM1 (ENSHGLG00000008701)	LHX1 (ENSHGLG00000042105) #18	AATF (ENSHGLG00000009510) #19	ENSHGLG00000038049	ACACA (ENSHGLG00000011781) #21	TADA2A (ENSHGLG00000003972) #22	DUSP14 (ENSHGLG00000033195) #23	ENSHGLG00000047903	SYNRG (ENSHGLG00000004431) #24	DDX52 (ENSHGLG00000006235) #25	ENSHGLG00000007638 #26	ENSHGLG00000001663	ENSHGLG00000001698	POLG2 (ENSHGLG00000037428)	DDX5 (ENSHGLG00000001771)	ENSHGLG00000044021	ENSHGLG00000001847	ENSHGLG00000001992	ENSHGLG00000002095	ENSHGLG00000002130	ENSHGLG00000047592
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00940000166945	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.b ##29	ENSGT00940000165476 #30	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596	ENSGT00390000007830
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00940000166945	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.b ##29	ENSGT01100000263482.C.c.b.a.a ##29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT00940000165476 #30	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Degu	MODERN SPECIES	205	CHCT1 (ENSODEG00000013458) #11	ENSODEG00000012951	ENSODEG00000013719	ENSODEG00000015311 #12	ENSODEG00000012868 #14	MYO19 (ENSODEG00000013791) #15	GGNBP2 (ENSODEG00000012950) #17	ENSODEG00000012529	ENSODEG00000013042	ENSODEG00000012953	ENSODEG00000013680	LHX1 (ENSODEG00000012895) #18	AATF (ENSODEG00000013074) #19	ENSODEG00000013269	ACACA (ENSODEG00000014030) #21	TADA2A (ENSODEG00000014579) #22	DUSP14 (ENSODEG00000020057) #23	SYNRG (ENSODEG00000013858) #24	ENSODEG00000012814 #25	ENSODEG00000012382	HNF1B (ENSODEG00000012709) #26	HEATR6 (ENSODEG00000013428) #28	ENSODEG00000013109	ENSODEG00000013480 ##29	ENSODEG00000013198 ##29	ENSODEG00000013395 ##29	ENSODEG00000013298	ENSODEG00000012792 #36	HEATR9 (ENSODEG00000012621) #37	ENSODEG00000012915	MMP28 (ENSODEG00000016303)
Long-tailed chinchilla	MODERN SPECIES	158	PPM1D (ENSCLAG00000010623) #9	APPBP2 (ENSCLAG00000014528) #10	CHCT1 (ENSCLAG00000015267) #11	ENSCLAG00000012909 #12	CA4 (ENSCLAG00000014926) #13	ZNHIT3 (ENSCLAG00000013180) #14	MYO19 (ENSCLAG00000011498) #15	PIGW (ENSCLAG00000010868) #16	GGNBP2 (ENSCLAG00000015068) #17	DHRS11 (ENSCLAG00000012667)	MRM1 (ENSCLAG00000010960)	LHX1 (ENSCLAG00000014662) #18	AATF (ENSCLAG00000014631) #19	C17orf78 (ENSCLAG00000013611) #20	ACACA (ENSCLAG00000015071) #21	TADA2A (ENSCLAG00000016976) #22	DUSP14 (ENSCLAG00000012666) #23	SYNRG (ENSCLAG00000013031) #24	DDX52 (ENSCLAG00000016292) #25	HNF1B (ENSCLAG00000016506) #26	HEATR6 (ENSCLAG00000010390) #28	ENSCLAG00000012435	ENSCLAG00000011924	ENSCLAG00000016754	ENSCLAG00000012634 ##29	ENSCLAG00000014501 ##29
Guinea pig	MODERN SPECIES	32	BCAS3 (ENSCPOG00000001933) #7	PPM1D (ENSCPOG00000000343) #9	APPBP2 (ENSCPOG00000033874) #10	CHCT1 (ENSCPOG00000005521) #11	ENSCPOG00000005504 #12	CA4 (ENSCPOG00000026479) #13	ZNHIT3 (ENSCPOG00000031447) #14	MYO19 (ENSCPOG00000004270) #15	PIGW (ENSCPOG00000004275) #16	GGNBP2 (ENSCPOG00000004278) #17	DHRS11 (ENSCPOG00000036629)	MRM1 (ENSCPOG00000004283)	LHX1 (ENSCPOG00000027154) #18	AATF (ENSCPOG00000006037) #19	ACACA (ENSCPOG00000006043) #21	TADA2A (ENSCPOG00000001869) #22	DUSP14 (ENSCPOG00000032995) #23	SYNRG (ENSCPOG00000004643) #24	DDX52 (ENSCPOG00000001232) #25	HNF1B (ENSCPOG00000001234) #26	HEATR6 (ENSCPOG00000015165) #28	ENSCPOG00000036860	ENSCPOG00000035230	ENSCPOG00000032867 ##29	ENSCPOG00000033663 ##29	ENSCPOG00000037138 ##29	ENSCPOG00000026400 #29	ENSCPOG00000039417 #31	CCL14 (ENSCPOG00000035450) #32	ENSCPOG00000008852 #36	HEATR9 (ENSCPOG00000010117) #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT00940000165476 #30	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596
Kangaroo rat	MODERN SPECIES	338	Tbx2 (ENSDORG00000024193)	Bcas3 (ENSDORG00000004366) #7	Ppm1d (ENSDORG00000004364) #9	Appbp2 (ENSDORG00000025450) #10	Chct1 (ENSDORG00000013035) #11	Usp32 (ENSDORG00000016159) #12	Car4 (ENSDORG00000007143) #13	Znhit3 (ENSDORG00000029572) #14	Myo19 (ENSDORG00000012276) #15	Ggnbp2 (ENSDORG00000013265) #17	Dhrs11 (ENSDORG00000013266)	Mrm1 (ENSDORG00000013267)	Lhx1 (ENSDORG00000006956) #18	ENSDORG00000006957	Acaca (ENSDORG00000006958) #21	Tada2a (ENSDORG00000009547) #22	Dusp14 (ENSDORG00000025341) #23	Synrg (ENSDORG00000004275) #24	Ddx52 (ENSDORG00000004276) #25	Hnf1b (ENSDORG00000009669) #26	Heatr6 (ENSDORG00000011214) #28	Wfdc21 (ENSDORG00000024216)	Ccl4 (ENSDORG00000026295) ##29	Ccl5 (ENSDORG00000007688) #36	ENSDORG00000003141 #37	Taf15 (ENSDORG00000014619)	Mmp28 (ENSDORG00000003809)	1700020L24Rik (ENSDORG00000003808)	ENSDORG00000026155	Rasl10b (ENSDORG00000003805)	Ap2b1 (ENSDORG00000003803)
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT00940000165476 #30	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596
Muroidea	ANCESTRAL SPECIES		ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT00940000165476 #30	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.a.b.a.m #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879.e	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.a.b.a.m #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879.e	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.a.b.a.m #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596
Prairie vole	MODERN SPECIES	15	Snn (ENSMOCG00000015655)	Txndc11 (ENSMOCG00000016648)	Zc3h7a (ENSMOCG00000016255)	Rsl1d1 (ENSMOCG00000017724)	Gspt1 (ENSMOCG00000019604)	Tnfrsf17 (ENSMOCG00000013695)	Snx29 (ENSMOCG00000006809)	ENSMOCG00000021741	Cpped1 (ENSMOCG00000002062)	Shisa9 (ENSMOCG00000022752)	ENSMOCG00000021004	Lhx1 (ENSMOCG00000012864) #18	Aatf (ENSMOCG00000021199) #19	Acaca (ENSMOCG00000006469) #21	Gm11437 (ENSMOCG00000015056) #20	Tada2a (ENSMOCG00000007050) #22	Dusp14 (ENSMOCG00000011337) #23	Synrg (ENSMOCG00000021006) #24	Ddx52 (ENSMOCG00000009654) #25	Hnf1b (ENSMOCG00000012217) #26	Heatr6 (ENSMOCG00000015431) #28	Wfdc21 (ENSMOCG00000019007)	ENSMOCG00000016372	ENSMOCG00000013687	Ccl4 (ENSMOCG00000012149) ##29	ENSMOCG00000013583 #29	ENSMOCG00000012772 #30	ENSMOCG00000002418 #30	Ccl5 (ENSMOCG00000020386) #36	Heatr9 (ENSMOCG00000009616) #37	Taf15 (ENSMOCG00000015121)
Northern American deer mouse	MODERN SPECIES	21	Ppm1d (ENSPEMG00000023276) #9	Appbp2 (ENSPEMG00000022734) #10	Chct1 (ENSPEMG00000003353) #11	Usp32 (ENSPEMG00000004467) #12	Car4 (ENSPEMG00000010937) #13	Znhit3 (ENSPEMG00000028356) #14	Myo19 (ENSPEMG00000022948) #15	Pigw (ENSPEMG00000023553) #16	Ggnbp2 (ENSPEMG00000022930) #17	Dhrs11 (ENSPEMG00000021946)	Mrm1 (ENSPEMG00000030596)	Lhx1 (ENSPEMG00000024834) #18	Aatf (ENSPEMG00000022006) #19	Acaca (ENSPEMG00000023800) #21	Gm11437 (ENSPEMG00000021648) #20	Tada2a (ENSPEMG00000022544) #22	Dusp14 (ENSPEMG00000030837) #23	Synrg (ENSPEMG00000025919) #24	Ddx52 (ENSPEMG00000003263) #25	Hnf1b (ENSPEMG00000023625) #26	Heatr6 (ENSPEMG00000022934) #28	Wfdc21 (ENSPEMG00000025133)	ENSPEMG00000021537 ##29	ENSPEMG00000021998	ENSPEMG00000022266	ENSPEMG00000026902 ##29	ENSPEMG00000028019 ##29	ENSPEMG00000025016 ##29	ENSPEMG00000027305 ##29	ENSPEMG00000026681	ENSPEMG00000030825 ##29
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879.f	ENSGT00530000064879.e	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT00940000165476.c #30	ENSGT00940000165476.d #30	ENSGT01100000263482.D #36	ENSGT00390000007247 #37
Chinese hamster chok1gshd	MODERN SPECIES	33	Chct1 (ENSCGRG00001006750) #11	ENSCGRG00001023587	ENSCGRG00001013461	Usp32 (ENSCGRG00001020062) #12	Car4 (ENSCGRG00001008651) #13	ENSCGRG00001019811 #14	Myo19 (ENSCGRG00001016014) #15	Pigw (ENSCGRG00001001433) #16	Ggnbp2 (ENSCGRG00001004400) #17	Dhrs11 (ENSCGRG00001017376)	Mrm1 (ENSCGRG00001001937)	Lhx1 (ENSCGRG00001018330) #18	Aatf (ENSCGRG00001005527) #19	Gm11437 (ENSCGRG00001012632) #20	Acaca (ENSCGRG00001022253) #21	Tada2a (ENSCGRG00001018460) #22	Dusp14 (ENSCGRG00001010127) #23	Synrg (ENSCGRG00001021744) #24	Ddx52 (ENSCGRG00001020695) #25	Hnf1b (ENSCGRG00001022328) #26	Heatr6 (ENSCGRG00001000753) #28	Wfdc21 (ENSCGRG00001020449)	ENSCGRG00001019205	ENSCGRG00001018407	Ccl4 (ENSCGRG00001020791) ##29	Ccl3 (ENSCGRG00001019421) #29	Ccl6 (ENSCGRG00001008290) #31	ENSCGRG00001017750 #30	Ccl5 (ENSCGRG00001017129) #36	Heatr9 (ENSCGRG00001019308) #37	Taf15 (ENSCGRG00001012011)
Golden Hamster	MODERN SPECIES	684	Ppm1d (ENSMAUG00000021070) #9	Appbp2 (ENSMAUG00000017006) #10	ENSMAUG00000000696 #11	Usp32 (ENSMAUG00000021723) #12	Car4 (ENSMAUG00000008867) #13	Znhit3 (ENSMAUG00000015879) #14	Myo19 (ENSMAUG00000008695) #15	Pigw (ENSMAUG00000022126) #16	Ggnbp2 (ENSMAUG00000020953) #17	Dhrs11 (ENSMAUG00000011459)	Mrm1 (ENSMAUG00000020976)	Lhx1 (ENSMAUG00000003621) #18	Aatf (ENSMAUG00000004548) #19	Acaca (ENSMAUG00000017414) #21	Gm11437 (ENSMAUG00000013814) #20	Tada2a (ENSMAUG00000009253) #22	Dusp14 (ENSMAUG00000015817) #23	Synrg (ENSMAUG00000015507) #24	Ddx52 (ENSMAUG00000021084) #25	ENSMAUG00000007943	Hnf1b (ENSMAUG00000009573) #26	Heatr6 (ENSMAUG00000009627) #28	Wfdc21 (ENSMAUG00000018673)	ENSMAUG00000009975	Ccl4 (ENSMAUG00000020742) ##29	Ccl3 (ENSMAUG00000021167) #29	ENSMAUG00000015635 #30	ENSMAUG00000021412 #30	Ccl5 (ENSMAUG00000000781) #36	Heatr9 (ENSMAUG00000019408) #37	ENSMAUG00000018386
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879.h	ENSGT00530000064879.g	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.a.b.a.m #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Mus	ANCESTRAL SPECIES	2	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879.h	ENSGT00530000064879.g	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.a.b.a.m #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879.h	ENSGT00530000064879.g.c	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.a.b.a.m #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879.h	ENSGT00530000064879.g.c	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.a.b.a.m #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Mouse	MODERN SPECIES	2	Ppm1d (ENSMUSG00000020525) #9	Appbp2 (ENSMUSG00000018481) #10	Chct1 (ENSMUSG00000018479) #11	Usp32 (ENSMUSG00000000804) #12	Car4 (ENSMUSG00000000805) #13	Znhit3 (ENSMUSG00000020526) #14	Myo19 (ENSMUSG00000020527) #15	Pigw (ENSMUSG00000045140) #16	Ggnbp2 (ENSMUSG00000020530) #17	Dhrs11 (ENSMUSG00000034449)	Mrm1 (ENSMUSG00000018405)	Lhx1 (ENSMUSG00000018698) #18	Aatf (ENSMUSG00000018697) #19	Gm11437 (ENSMUSG00000051452) #20	Acaca (ENSMUSG00000020532) #21	Tada2a (ENSMUSG00000018651) #22	Dusp14 (ENSMUSG00000018648) #23	Synrg (ENSMUSG00000034940) #24	Ddx52 (ENSMUSG00000020677) #25	Hnf1b (ENSMUSG00000020679) #26	Heatr6 (ENSMUSG00000000976) #28	Wfdc21 (ENSMUSG00000051748)	Wfdc18 (ENSMUSG00000000983)	Wfdc17 (ENSMUSG00000069792)	Ccl4 (ENSMUSG00000018930) ##29	Ccl3 (ENSMUSG00000000982) #29	Ccl6 (ENSMUSG00000018927) #31	Ccl9 (ENSMUSG00000019122) #31	Ccl5 (ENSMUSG00000035042) #36	Heatr9 (ENSMUSG00000018925) #37	Taf15 (ENSMUSG00000020680)
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00390000008122 #20	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00530000064879.h	ENSGT00530000064879.g.c	ENSGT01100000263482.C.c.a ##29	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.a.b.a.m #31	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438
Steppe mouse	MODERN SPECIES	3305	ENSMSIG00000011045	Chct1 (ENSMSIG00000011050) #11	Usp32 (ENSMSIG00000011103) #12	ENSMSIG00000011217	Car4 (ENSMSIG00000011228) #13	Znhit3 (ENSMSIG00000011245) #14	Myo19 (ENSMSIG00000011255) #15	Pigw (ENSMSIG00000011294) #16	Ggnbp2 (ENSMSIG00000011309) #17	Dhrs11 (ENSMSIG00000011441)	Mrm1 (ENSMSIG00000011460)	Lhx1 (ENSMSIG00000011492) #18	Aatf (ENSMSIG00000011523) #19	Acaca (ENSMSIG00000011559) #21	Gm11437 (ENSMSIG00000011800) #20	Tada2a (ENSMSIG00000011818) #22	Dusp14 (ENSMSIG00000011867) #23	Synrg (ENSMSIG00000011874) #24	Ddx52 (ENSMSIG00000012043) #25	Hnf1b (ENSMSIG00000012071) #26	Heatr6 (ENSMSIG00000012205) #28	Wfdc21 (ENSMSIG00000012277)	Wfdc18 (ENSMSIG00000012297)	Wfdc17 (ENSMSIG00000012316)	ENSMSIG00000012323	ENSMSIG00000012332	ENSMSIG00000012344	Ccl4 (ENSMSIG00000012352) ##29	Ccl3 (ENSMSIG00000012367) #29	Ccl6 (ENSMSIG00000012387) #31	Ccl9 (ENSMSIG00000012396) #31
spretus	MODERN SPECIES	2	Ppm1d (MGP_SPRETEiJ_G0017751) #9	MGP_SPRETEiJ_G0017750 #10	Chct1 (MGP_SPRETEiJ_G0017749) #11	Usp32 (MGP_SPRETEiJ_G0017748) #12	Car4 (MGP_SPRETEiJ_G0017747) #13	Znhit3 (MGP_SPRETEiJ_G0017746) #14	Myo19 (MGP_SPRETEiJ_G0017745) #15	Pigw (MGP_SPRETEiJ_G0017744) #16	Ggnbp2 (MGP_SPRETEiJ_G0017743) #17	Dhrs11 (MGP_SPRETEiJ_G0017742)	Mrm1 (MGP_SPRETEiJ_G0017741)	Lhx1 (MGP_SPRETEiJ_G0017740) #18	Aatf (MGP_SPRETEiJ_G0017739) #19	Gm11437 (MGP_SPRETEiJ_G0017738) #20	Acaca (MGP_SPRETEiJ_G0017737) #21	Tada2a (MGP_SPRETEiJ_G0017736) #22	Dusp14 (MGP_SPRETEiJ_G0017735) #23	Synrg (MGP_SPRETEiJ_G0017734) #24	Ddx52 (MGP_SPRETEiJ_G0017733) #25	Hnf1b (MGP_SPRETEiJ_G0017732) #26	Heatr6 (MGP_SPRETEiJ_G0017731) #28	Wfdc21 (MGP_SPRETEiJ_G0017730)	Wfdc18 (MGP_SPRETEiJ_G0017729)	Wfdc17 (MGP_SPRETEiJ_G0017728)	Ccl4 (MGP_SPRETEiJ_G0017727) ##29	Ccl3 (MGP_SPRETEiJ_G0017726) #29	MGP_SPRETEiJ_G0017725	Ccl6 (MGP_SPRETEiJ_G0017724) #31	Ccl9 (MGP_SPRETEiJ_G0017723) #31	Ccl5 (MGP_SPRETEiJ_G0017722) #36	Heatr9 (MGP_SPRETEiJ_G0017721) #37
Ryukyu mouse	MODERN SPECIES	2	Ppm1d (MGP_CAROLIEiJ_G0016906) #9	Appbp2 (MGP_CAROLIEiJ_G0016905) #10	Chct1 (MGP_CAROLIEiJ_G0016904) #11	Usp32 (MGP_CAROLIEiJ_G0016903) #12	Car4 (MGP_CAROLIEiJ_G0016902) #13	Znhit3 (MGP_CAROLIEiJ_G0016901) #14	Myo19 (MGP_CAROLIEiJ_G0016900) #15	Pigw (MGP_CAROLIEiJ_G0016899) #16	Ggnbp2 (MGP_CAROLIEiJ_G0016898) #17	Dhrs11 (MGP_CAROLIEiJ_G0016897)	Mrm1 (MGP_CAROLIEiJ_G0016896)	Lhx1 (MGP_CAROLIEiJ_G0016895) #18	Aatf (MGP_CAROLIEiJ_G0016894) #19	Gm11437 (MGP_CAROLIEiJ_G0016893) #20	Acaca (MGP_CAROLIEiJ_G0016892) #21	Tada2a (MGP_CAROLIEiJ_G0016891) #22	Dusp14 (MGP_CAROLIEiJ_G0016890) #23	Synrg (MGP_CAROLIEiJ_G0016889) #24	Ddx52 (MGP_CAROLIEiJ_G0016888) #25	Hnf1b (MGP_CAROLIEiJ_G0016887) #26	Heatr6 (MGP_CAROLIEiJ_G0016886) #28	Wfdc21 (MGP_CAROLIEiJ_G0016885)	Wfdc18 (MGP_CAROLIEiJ_G0016884)	Wfdc17 (MGP_CAROLIEiJ_G0016883)	Ccl4 (MGP_CAROLIEiJ_G0016882) ##29	Ccl3 (MGP_CAROLIEiJ_G0016881) #29	Ccl6 (MGP_CAROLIEiJ_G0016880) #31	Ccl9 (MGP_CAROLIEiJ_G0016879) #31	Ccl5 (MGP_CAROLIEiJ_G0016878) #36	Heatr9 (MGP_CAROLIEiJ_G0016877) #37	Taf15 (MGP_CAROLIEiJ_G0016876)
Shrew mouse	MODERN SPECIES	5	Ppm1d (MGP_PahariEiJ_G0018036) #9	Appbp2 (MGP_PahariEiJ_G0018035) #10	Chct1 (MGP_PahariEiJ_G0018034) #11	Usp32 (MGP_PahariEiJ_G0018033) #12	Car4 (MGP_PahariEiJ_G0018032) #13	Znhit3 (MGP_PahariEiJ_G0018031) #14	Myo19 (MGP_PahariEiJ_G0018030) #15	Pigw (MGP_PahariEiJ_G0018029) #16	Ggnbp2 (MGP_PahariEiJ_G0018028) #17	Dhrs11 (MGP_PahariEiJ_G0018027)	Mrm1 (MGP_PahariEiJ_G0018026)	Lhx1 (MGP_PahariEiJ_G0018025) #18	Aatf (MGP_PahariEiJ_G0018024) #19	Gm11437 (MGP_PahariEiJ_G0018023) #20	Acaca (MGP_PahariEiJ_G0018022) #21	Tada2a (MGP_PahariEiJ_G0018021) #22	Dusp14 (MGP_PahariEiJ_G0018020) #23	Synrg (MGP_PahariEiJ_G0018019) #24	Ddx52 (MGP_PahariEiJ_G0018018) #25	Hnf1b (MGP_PahariEiJ_G0018017) #26	Heatr6 (MGP_PahariEiJ_G0018016) #28	Wfdc21 (MGP_PahariEiJ_G0018015)	Ccl4 (MGP_PahariEiJ_G0018013) ##29	Ccl3 (MGP_PahariEiJ_G0018012) #29	Ccl6 (MGP_PahariEiJ_G0018011) #31	Ccl9 (MGP_PahariEiJ_G0018010) #31	Ccl5 (MGP_PahariEiJ_G0018009) #36	Heatr9 (MGP_PahariEiJ_G0018008) #37	Taf15 (MGP_PahariEiJ_G0018007)	Mmp28 (MGP_PahariEiJ_G0018006)	1700020L24Rik (MGP_PahariEiJ_G0018005)
Rat	MODERN SPECIES	1	ENSRNOG00000069734	Usp32 (ENSRNOG00000027711) #12	ENSRNOG00000067083	Car4 (ENSRNOG00000002916) #13	Znhit3 (ENSRNOG00000063476) #14	Myo19 (ENSRNOG00000002852) #15	Pigw (ENSRNOG00000027857) #16	Ggnbp2 (ENSRNOG00000027860) #17	Ube2i (ENSRNOG00000017907)	Dhrs11 (ENSRNOG00000027891)	Mrm1 (ENSRNOG00000027901)	Lhx1 (ENSRNOG00000002812) #18	Aatf (ENSRNOG00000002778) #19	LOC102552988 (ENSRNOG00000028116) #20	Acaca (ENSRNOG00000034013) #21	Tada2a (ENSRNOG00000002757) #22	Dusp14 (ENSRNOG00000030091) #23	Ac1576 (ENSRNOG00000058372)	Synrg (ENSRNOG00000053814) #24	Ddx52 (ENSRNOG00000002612) #25	Hnf1b (ENSRNOG00000002598) #26	Heatr6 (ENSRNOG00000002542) #28	Wfdc21 (ENSRNOG00000029668)	AABR07030143.1 (ENSRNOG00000057390)	Wfdc18 (ENSRNOG00000037097)	ENSRNOG00000067505	Anos1 (ENSRNOG00000002497)	ENSRNOG00000066744	LOC100909660 (ENSRNOG00000066869)	LOC103695128 (ENSRNOG00000051084)	ENSRNOG00000070672
Upper Galilee mountains blind mole rat	MODERN SPECIES	1422																Tada2a (ENSNGAG00000019511) #22	Dusp14 (ENSNGAG00000000587) #23	Synrg (ENSNGAG00000000321) #24	Ddx52 (ENSNGAG00000020686) #25	Hnf1b (ENSNGAG00000017601) #26	Heatr6 (ENSNGAG00000016534) #28	Wfdc21 (ENSNGAG00000012983)	ENSNGAG00000017535	Ccl4 (ENSNGAG00000003228) ##29	Ccl3 (ENSNGAG00000003991) #29	ENSNGAG00000006220 #30	Ccl5 (ENSNGAG00000003622) #36	Heatr9 (ENSNGAG00000011711) #37	Taf15 (ENSNGAG00000017633)	ENSNGAG00000015117	Mmp28 (ENSNGAG00000014473)
Lesser Egyptian jerboa	MODERN SPECIES	112	Ppm1d (ENSJJAG00000024338) #9	Appbp2 (ENSJJAG00000018940) #10	Chct1 (ENSJJAG00000008525) #11	Usp32 (ENSJJAG00000013153) #12	Car4 (ENSJJAG00000024230) #13	Znhit3 (ENSJJAG00000021789) #14	Myo19 (ENSJJAG00000018388) #15	Ggnbp2 (ENSJJAG00000020699) #17	Dhrs11 (ENSJJAG00000006482)	Mrm1 (ENSJJAG00000010068)	Lhx1 (ENSJJAG00000024155) #18	Aatf (ENSJJAG00000000330) #19	Acaca (ENSJJAG00000016405) #21	Gm11437 (ENSJJAG00000004019) #20	ENSJJAG00000010620	Tada2a (ENSJJAG00000014360) #22	Dusp14 (ENSJJAG00000010198) #23	Synrg (ENSJJAG00000021827) #24	Ddx52 (ENSJJAG00000021877) #25	Hnf1b (ENSJJAG00000011207) #26	Heatr6 (ENSJJAG00000012154) #28	Wfdc21 (ENSJJAG00000014661)	ENSJJAG00000023138	Ccl4 (ENSJJAG00000011404) ##29	Ccl3 (ENSJJAG00000022032) #29	Ccl5 (ENSJJAG00000024069) #36	Heatr9 (ENSJJAG00000012557) #37	Taf15 (ENSJJAG00000010606)	Mmp28 (ENSJJAG00000009319)	1700020L24Rik (ENSJJAG00000011369)	ENSJJAG00000020015
Lagomorpha	ANCESTRAL SPECIES		ENSGT00390000006454 #7	ENSGT00940000155672 #9	ENSGT00390000010722 #10	ENSGT00390000003769 #11	ENSGT00940000155797 #12	ENSGT00940000155690 #13	ENSGT00390000010822 #14	ENSGT00940000157382 #15	ENSGT00390000013520 #16	ENSGT00390000009552 #17	ENSGT00840000129887	ENSGT00390000018761	ENSGT00940000160834 #18	ENSGT00390000000288 #19	ENSGT00940000156706 #21	ENSGT00940000156751 #22	ENSGT00940000160675 #23	ENSGT00390000010789 #24	ENSGT00550000074863 #25	ENSGT00940000153818.a.b.a.b #26	ENSGT00390000016675 #28	ENSGT00520000060616	ENSGT00940000165089	ENSGT01100000263482.C.c.b.b.a.b #29	ENSGT00940000165476.b #30	ENSGT01100000263482.C.c.b.a.b.b #32	ENSGT01100000263482.B #33	ENSGT01100000263482.D #36	ENSGT00390000007247 #37	ENSGT00940000156438	ENSGT00940000159596
Rabbit	MODERN SPECIES	10	BCAS3 (ENSOCUG00000010794) #7	ENSOCUG00000029614 #9	APPBP2 (ENSOCUG00000009419) #10	CHCT1 (ENSOCUG00000009414) #11	ENSOCUG00000009402 #12	ENSOCUG00000009399 #13	ENSOCUG00000000920 #14	MYO19 (ENSOCUG00000000921) #15	PIGW (ENSOCUG00000000924) #16	GGNBP2 (ENSOCUG00000000925) #17	DHRS11 (ENSOCUG00000021228)	MRM1 (ENSOCUG00000012149)	LHX1 (ENSOCUG00000024664) #18	AATF (ENSOCUG00000014434) #19	ACACA (ENSOCUG00000014453) #21	TADA2A (ENSOCUG00000014504) #22	DUSP14 (ENSOCUG00000009880) #23	SYNRG (ENSOCUG00000014519) #24	DDX52 (ENSOCUG00000014532) #25	HNF1B (ENSOCUG00000003682) #26	HEATR6 (ENSOCUG00000003690) #28	ENSOCUG00000036945	ENSOCUG00000026206	ENSOCUG00000000771 #29	ENSOCUG00000000686 #30	CCL14 (ENSOCUG00000002849) #32	ENSOCUG00000002848 #36	HEATR9 (ENSOCUG00000002842) #37	TAF15 (ENSOCUG00000002838)	MMP28 (ENSOCUG00000004089)	C17orf50 (ENSOCUG00000004084)
Pika	MODERN SPECIES	121																TADA2A (ENSOPRG00000003802) #22	DUSP14 (ENSOPRG00000003841) #23	SYNRG (ENSOPRG00000003846) #24	DDX52 (ENSOPRG00000003899) #25	HNF1B (ENSOPRG00000003933) #26
Tree shrew	MODERN SPECIES	3499															ENSTBEG00000003094 #20	TADA2A (ENSTBEG00000003642) #22	DUSP14 (ENSTBEG00000004403) #23	SYNRG (ENSTBEG00000004436) #24	DDX52 (ENSTBEG00000005982) #25	HNF1B (ENSTBEG00000007107) #26