Muroidea_A	ANCESTRAL SPECIES	32	ENSGT00940000164126 #7	ENSGT00390000007318 #8	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b #23	ENSGT00910000144184.q.a.h #24	ENSGT00940000159705 #25	ENSGT00940000156415 #26	ENSGT00940000155985 #27	ENSGT00940000160242 #28
Murinae	ANCESTRAL SPECIES	26	ENSGT00940000164126 #7	ENSGT00390000007318 #8	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b #23	ENSGT00910000144184.q.a.h #24	ENSGT00940000159705 #25	ENSGT00940000156415 #26	ENSGT00940000155985 #27	ENSGT00940000160242 #28	ENSGT00940000157901	ENSGT00390000005163	ENSGT01100000263497.C	ENSGT00390000004313	ENSGT00940000156775	ENSGT00940000159813	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A
Mus	ANCESTRAL SPECIES	8	ENSGT00940000164126 #7	ENSGT00390000007318 #8	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b #23	ENSGT00910000144184.q.a.h #24	ENSGT00940000159705 #25	ENSGT00940000156415 #26	ENSGT00940000155985 #27	ENSGT00940000157901	ENSGT00390000005163	ENSGT01100000263497.C	ENSGT00390000004313	ENSGT00940000156775	ENSGT00940000159813	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000164126 #7	ENSGT00390000007318 #8	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b.d #23	ENSGT00910000144184.q.a.h #24	ENSGT00940000159705 #25	ENSGT00940000156415.m.a #26	ENSGT00940000155985 #27	ENSGT00940000157901	ENSGT00390000005163	ENSGT01100000263497.C	ENSGT00390000004313	ENSGT00940000156775	ENSGT00940000159813	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549
Mus_B	ANCESTRAL SPECIES	11	ENSGT00390000007318 #8	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT00940000171119	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b.d #23	ENSGT00910000144184.q.a.h #24	ENSGT00940000159705 #25	ENSGT00940000156415.m.a #26	ENSGT00940000155985 #27	ENSGT00940000157901	ENSGT00390000005163	ENSGT01100000263497.C	ENSGT00390000004313	ENSGT00940000156775	ENSGT00940000159813	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549
Mouse	MODERN SPECIES	5	Gm11100 (ENSMUSG00000079357) #8	Thoc7 (ENSMUSG00000053453) #9	Atxn7 (ENSMUSG00000021738) #10	Psmd6 (ENSMUSG00000021737) #11	Or2t6 (ENSMUSG00000052417) #12	Or2t1 (ENSMUSG00000072707) #13	Il3ra (ENSMUSG00000068758)	Or2t35 (ENSMUSG00000091809) #14	Slc4a7 (ENSMUSG00000021733) #15	Nek10 (ENSMUSG00000042567) #16	Lrrc3b (ENSMUSG00000045201) #17	Oxsm (ENSMUSG00000021786) #18	Ngly1 (ENSMUSG00000021785) #19	Top2b (ENSMUSG00000017485) #20	Rarb (ENSMUSG00000017491) #21	Thrb (ENSMUSG00000021779) #22	Nr1d2 (ENSMUSG00000021775) #23	Rpl15 (ENSMUSG00000012405) #24	Nkiras1 (ENSMUSG00000021772) #25	Ube2e1 (ENSMUSG00000021774) #26	Ube2e2 (ENSMUSG00000058317) #27
Mus_C	ANCESTRAL SPECIES	26	ENSGT00390000007318 #8	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT00940000171119	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b.c.a #23	ENSGT00910000144184.r.h ##24	ENSGT00940000159705 #25	ENSGT00940000156415.m.a #26	ENSGT00940000155985 #27	ENSGT00940000157901	ENSGT00390000005163	ENSGT01100000263497.C	ENSGT00390000004313	ENSGT00940000156775	ENSGT00940000159813	ENSGT00940000158879	ENSGT00390000015361	ENSGT00530000063727.A	ENSGT00390000014549
spretus	MODERN SPECIES	5	Thoc7 (MGP_SPRETEiJ_G0019833) #9	MGP_SPRETEiJ_G0019834 #10	Psmd6 (MGP_SPRETEiJ_G0019835) #11	Or2t6 (MGP_SPRETEiJ_G0019836) #12	Or2t1 (MGP_SPRETEiJ_G0019837) #13	Il3ra (MGP_SPRETEiJ_G0019838)	Or2t35 (MGP_SPRETEiJ_G0019839) #14	Slc4a7 (MGP_SPRETEiJ_G0019840) #15	Nek10 (MGP_SPRETEiJ_G0019841) #16	Lrrc3b (MGP_SPRETEiJ_G0019842) #17	MGP_SPRETEiJ_G0019843	Oxsm (MGP_SPRETEiJ_G0019844) #18	Ngly1 (MGP_SPRETEiJ_G0019845) #19	Top2b (MGP_SPRETEiJ_G0019846) #20	Rarb (MGP_SPRETEiJ_G0019847) #21	Thrb (MGP_SPRETEiJ_G0019848) #22	Nr1d2 (MGP_SPRETEiJ_G0019849) #23	Nkiras1 (MGP_SPRETEiJ_G0019850) #25	Ube2e1 (MGP_SPRETEiJ_G0019851) #26	Ube2e2 (MGP_SPRETEiJ_G0019852) #27	MGP_SPRETEiJ_G0019853	MGP_SPRETEiJ_G0019854	Nid2 (MGP_SPRETEiJ_G0019855)	Rtraf (MGP_SPRETEiJ_G0019856)	Gng2 (MGP_SPRETEiJ_G0019857)	Saysd1 (MGP_SPRETEiJ_G0019858)	Kcnk5 (MGP_SPRETEiJ_G0019859)	Kcnk16 (MGP_SPRETEiJ_G0019860)	Nudt13 (MGP_SPRETEiJ_G0019861)	Ecd (MGP_SPRETEiJ_G0019862)	Fam149b (MGP_SPRETEiJ_G0019863)
Steppe mouse	MODERN SPECIES	2326																Thrb (ENSMSIG00000001348) #22
Ryukyu mouse	MODERN SPECIES	5	Cdhr18 (MGP_CAROLIEiJ_G0018956) #7	Thoc7 (MGP_CAROLIEiJ_G0018957) #9	Atxn7 (MGP_CAROLIEiJ_G0018958) #10	Psmd6 (MGP_CAROLIEiJ_G0018959) #11	Or2t6 (MGP_CAROLIEiJ_G0018960) #12	Or2t1 (MGP_CAROLIEiJ_G0018961) #13	Il3ra (MGP_CAROLIEiJ_G0018962)	Or2t35 (MGP_CAROLIEiJ_G0018963) #14	Slc4a7 (MGP_CAROLIEiJ_G0018964) #15	MGP_CAROLIEiJ_G0018965 #16	Lrrc3b (MGP_CAROLIEiJ_G0018966) #17	Oxsm (MGP_CAROLIEiJ_G0018967) #18	Ngly1 (MGP_CAROLIEiJ_G0018968) #19	Top2b (MGP_CAROLIEiJ_G0018969) #20	Rarb (MGP_CAROLIEiJ_G0018970) #21	Thrb (MGP_CAROLIEiJ_G0018971) #22	Nr1d2 (MGP_CAROLIEiJ_G0018972) #23	MGP_CAROLIEiJ_G0018973 ##24	Nkiras1 (MGP_CAROLIEiJ_G0018974) #25	Ube2e1 (MGP_CAROLIEiJ_G0018975) #26	Ube2e2 (MGP_CAROLIEiJ_G0018976) #27	Nid2 (MGP_CAROLIEiJ_G0018977)	Rtraf (MGP_CAROLIEiJ_G0018978)	Gng2 (MGP_CAROLIEiJ_G0018979)	Saysd1 (MGP_CAROLIEiJ_G0018980)	Kcnk5 (MGP_CAROLIEiJ_G0018981)	Kcnk16 (MGP_CAROLIEiJ_G0018982)	Nudt13 (MGP_CAROLIEiJ_G0018983)	Ecd (MGP_CAROLIEiJ_G0018984)	Fam149b (MGP_CAROLIEiJ_G0018985)	Dnajc9 (MGP_CAROLIEiJ_G0018986)
Shrew mouse	MODERN SPECIES	21	Cdhr18 (MGP_PahariEiJ_G0029970) #7	Thoc7 (MGP_PahariEiJ_G0029971) #9	Atxn7 (MGP_PahariEiJ_G0029972) #10	Psmd6 (MGP_PahariEiJ_G0029973) #11	Or2t6 (MGP_PahariEiJ_G0029974) #12	Or2t1 (MGP_PahariEiJ_G0029975) #13	MGP_PahariEiJ_G0029976	Or2t35 (MGP_PahariEiJ_G0029977) #14	Slc4a7 (MGP_PahariEiJ_G0029978) #15	Nek10 (MGP_PahariEiJ_G0029979) #16	Lrrc3b (MGP_PahariEiJ_G0029980) #17	Oxsm (MGP_PahariEiJ_G0029981) #18	Ngly1 (MGP_PahariEiJ_G0029982) #19	Top2b (MGP_PahariEiJ_G0029983) #20	Rarb (MGP_PahariEiJ_G0029984) #21	Thrb (MGP_PahariEiJ_G0029985) #22	Nr1d2 (MGP_PahariEiJ_G0029986) #23	MGP_PahariEiJ_G0029987 #24	Nkiras1 (MGP_PahariEiJ_G0029988) #25	Ube2e1 (MGP_PahariEiJ_G0029989) #26	Ube2e2 (MGP_PahariEiJ_G0029990) #27	Nid2 (MGP_PahariEiJ_G0029991)	Rtraf (MGP_PahariEiJ_G0029992)	Gng2 (MGP_PahariEiJ_G0029993)	Saysd1 (MGP_PahariEiJ_G0029994)	Kcnk5 (MGP_PahariEiJ_G0029995)	Kcnk16 (MGP_PahariEiJ_G0029996)	Nudt13 (MGP_PahariEiJ_G0029997)	Ecd (MGP_PahariEiJ_G0029998)	MGP_PahariEiJ_G0029999	Dnajc9 (MGP_PahariEiJ_G0030000)
Rat	MODERN SPECIES	6	Thoc7 (ENSRNOG00000007701) #9	Atxn7 (ENSRNOG00000007246) #10	Psmd6 (ENSRNOG00000006751) #11	Or2t6 (ENSRNOG00000063635) #12	Or2t1 (ENSRNOG00000068637) #13	Or2t35 (ENSRNOG00000062911) #14	Slc4a7 (ENSRNOG00000005957) #15	Tcea1l1 (ENSRNOG00000005869)	Nek10 (ENSRNOG00000005883) #16	ENSRNOG00000067381	Lrrc3b (ENSRNOG00000005857) #17	Oxsm (ENSRNOG00000005993) #18	Ngly1 (ENSRNOG00000006143) #19	Top2b (ENSRNOG00000048795) #20	Rarb (ENSRNOG00000024061) #21	Thrb (ENSRNOG00000006649) #22	Nr1d2 (ENSRNOG00000046912) #23	Rpl15 (ENSRNOG00000008140) #24	Nkiras1 (ENSRNOG00000008565) #25	ENSRNOG00000064141	Ube2e1 (ENSRNOG00000008794) #26	Ube2e2 (ENSRNOG00000032690) #27	Zfp385d (ENSRNOG00000014661) #28	ENSRNOG00000071188	ENSRNOG00000070692	Spetex-2F (ENSRNOG00000029659)	ENSRNOG00000071095	Spetex-2E (ENSRNOG00000065267)	LOC102547212 (ENSRNOG00000070972)	LOC120096906 (ENSRNOG00000068863)	Spetex-2G (ENSRNOG00000070015)
Cricetidae	ANCESTRAL SPECIES	31	ENSGT00940000164126 #7	ENSGT00390000007318 #8	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b #23	ENSGT00910000144184.q.a.h #24	ENSGT00940000159705 #25	ENSGT00940000156415 #26	ENSGT00940000155985 #27	ENSGT00940000160242 #28	ENSGT00940000155748.b	ENSGT00940000154368.k	ENSGT00940000156653	ENSGT00950000183185.c.a.b	ENSGT00940000161631	ENSGT00940000162091	ENSGT00940000161199	ENSGT00940000159235	ENSGT00940000159732
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00390000003322	ENSGT00940000164126 #7	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b #23	ENSGT00910000144184.q.a.h #24	ENSGT00940000159705 #25	ENSGT00940000156415 #26	ENSGT00940000155985 #27	ENSGT00940000160242 #28	ENSGT00940000155748.b	ENSGT00940000154368.k	ENSGT00940000156653	ENSGT00950000183185.c.a.b	ENSGT00940000161631	ENSGT00940000162091	ENSGT00940000161199	ENSGT00940000159235	ENSGT00940000159732
Chinese hamster chok1gshd	MODERN SPECIES	76	Or2t6 (ENSCGRG00001010437) #12	ENSCGRG00001010787	Or2t1 (ENSCGRG00001012106) #13	ENSCGRG00001010774	ENSCGRG00001011280 #14	ENSCGRG00001010807	ENSCGRG00001011219 #14	ENSCGRG00001011398	Slc4a7 (ENSCGRG00001019823) #15	Nek10 (ENSCGRG00001023436) #16	Lrrc3b (ENSCGRG00001010343) #17	Oxsm (ENSCGRG00001010895) #18	Ngly1 (ENSCGRG00001015315) #19	Top2b (ENSCGRG00001020296) #20	Rarb (ENSCGRG00001000228) #21	Thrb (ENSCGRG00001007517) #22	Nr1d2 (ENSCGRG00001007315) #23	Rpl15 (ENSCGRG00001021972) #24	Nkiras1 (ENSCGRG00001001506) #25	Ube2e1 (ENSCGRG00001002657) #26	Ube2e2 (ENSCGRG00001007796) #27	ENSCGRG00001012384 #28	ENSCGRG00001014762	Sftpd (ENSCGRG00001016517)	Mbl1 (ENSCGRG00001017391)	Sftpa1 (ENSCGRG00001017978)	Mat1a (ENSCGRG00001018656)	Dydc1 (ENSCGRG00001000992)	Dydc2 (ENSCGRG00001005256)	Prxl2a (ENSCGRG00001006989)	Tspan14 (ENSCGRG00001013610)
Golden Hamster	MODERN SPECIES	725												Oxsm (ENSMAUG00000008599) #18	Ngly1 (ENSMAUG00000021151) #19	Top2b (ENSMAUG00000018711) #20	Rarb (ENSMAUG00000000652) #21	Thrb (ENSMAUG00000008673) #22	Nkiras1 (ENSMAUG00000007906) #25	Ube2e1 (ENSMAUG00000015316) #26	Ube2e2 (ENSMAUG00000015091) #27	ENSMAUG00000012393 #28	ENSMAUG00000012877	Sftpd (ENSMAUG00000008377)	Mbl1 (ENSMAUG00000014755)	Sftpa1 (ENSMAUG00000012489)	Mat1a (ENSMAUG00000005630)	Dydc1 (ENSMAUG00000004246)	Dydc2 (ENSMAUG00000021745)	Prxl2a (ENSMAUG00000019951)	Tspan14 (ENSMAUG00000015066)	ENSMAUG00000001819	Nrg3 (ENSMAUG00000011497)
Cricetidae_B	ANCESTRAL SPECIES	42	ENSGT00940000164126 #7	ENSGT00390000007318 #8	ENSGT00390000002873.h #9	ENSGT00940000157279 #10	ENSGT00510000046608.B #11	ENSGT01090000260018.A.a.a.a.a.b.b #12	ENSGT01090000260018.A.a.a.a.a.b.a.f #13	ENSGT01090000260018.A.a.a.a.b.a #14	ENSGT00940000157045 #15	ENSGT00940000161037 #16	ENSGT00940000157780 #17	ENSGT00940000157768 #18	ENSGT00390000006540 #19	ENSGT00940000157921 #20	ENSGT00940000156196 #21	ENSGT00940000156809.b #22	ENSGT00940000155168.a.b #23	ENSGT00910000144184.q.a.h #24	ENSGT00940000159705 #25	ENSGT00940000156415 #26	ENSGT00940000155985 #27	ENSGT00940000160242 #28	ENSGT00940000155748.b	ENSGT00940000154368.k	ENSGT00940000156653	ENSGT00950000183185.c.a.b	ENSGT00940000161631	ENSGT00940000162091	ENSGT00940000161199	ENSGT00940000159235	ENSGT00940000159732
Prairie vole	MODERN SPECIES	14	Atxn7 (ENSMOCG00000018713) #10	Psmd6 (ENSMOCG00000000946) #11	ENSMOCG00000003409	ENSMOCG00000012122	Or2t6 (ENSMOCG00000002330) #12	ENSMOCG00000012041	ENSMOCG00000023004 #14	ENSMOCG00000002652 #14	Slc4a7 (ENSMOCG00000000599) #15	Nek10 (ENSMOCG00000020582) #16	Lrrc3b (ENSMOCG00000002644) #17	Oxsm (ENSMOCG00000019242) #18	Ngly1 (ENSMOCG00000022189) #19	Top2b (ENSMOCG00000002765) #20	Rarb (ENSMOCG00000005835) #21	Thrb (ENSMOCG00000013115) #22	ENSMOCG00000016625 #23	ENSMOCG00000018417 #23	Rpl15 (ENSMOCG00000009270) #24	Nkiras1 (ENSMOCG00000012003) #25	Ube2e1 (ENSMOCG00000010086) #26	Ube2e2 (ENSMOCG00000018312) #27	ENSMOCG00000003023 #28	ENSMOCG00000005726	Sftpd (ENSMOCG00000022358)	Mbl1 (ENSMOCG00000007278)	Sftpa1 (ENSMOCG00000015086)	Mat1a (ENSMOCG00000022118)	Dydc1 (ENSMOCG00000008679)	Dydc2 (ENSMOCG00000011087)	Prxl2a (ENSMOCG00000003643)
Northern American deer mouse	MODERN SPECIES	22	Thoc7 (ENSPEMG00000000620) #9	Atxn7 (ENSPEMG00000003214) #10	Psmd6 (ENSPEMG00000007867) #11	Or2t6 (ENSPEMG00000014010) #12	Or2t1 (ENSPEMG00000014201) #13	Or2t35 (ENSPEMG00000030359) #14	Slc4a7 (ENSPEMG00000020169) #15	Nek10 (ENSPEMG00000002287) #16	ENSPEMG00000027561	Lrrc3b (ENSPEMG00000007539) #17	Oxsm (ENSPEMG00000007951) #18	Ngly1 (ENSPEMG00000009786) #19	Top2b (ENSPEMG00000010015) #20	Rarb (ENSPEMG00000011795) #21	ENSPEMG00000026685	Thrb (ENSPEMG00000013006) #22	Nr1d2 (ENSPEMG00000014504) #23	Rpl15 (ENSPEMG00000015540) #24	Nkiras1 (ENSPEMG00000015836) #25	Ube2e1 (ENSPEMG00000016554) #26	Ube2e2 (ENSPEMG00000018980) #27	ENSPEMG00000030952	ENSPEMG00000026001	ENSPEMG00000029844	ENSPEMG00000029653	ENSPEMG00000012583 #28	Sftpd (ENSPEMG00000010320)	Mbl1 (ENSPEMG00000017415)	Sftpa1 (ENSPEMG00000027926)	Mat1a (ENSPEMG00000008918)	Dydc1 (ENSPEMG00000013569)