Mus	ANCESTRAL SPECIES	13	ENSGT01070000255383	ENSGT00940000154829.c	ENSGT00950000182952.A.b	ENSGT00390000002429	ENSGT00390000001844.a.a	ENSGT00940000159353	ENSGT00940000157860	ENSGT00940000156271	ENSGT00940000160634	ENSGT00390000008902	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073 #22	ENSGT00390000016055 #23	ENSGT00390000007224.b #24	ENSGT00940000156013 #25	ENSGT00550000074783 #26	ENSGT00940000164659	ENSGT00940000158923 #28	ENSGT00940000156253 #29	ENSGT00940000162550 #31	ENSGT00940000159077 #32	ENSGT00390000001157.A.a #33	ENSGT00860000134598 #34	ENSGT00730000111511 #35	ENSGT00730000111539 #36	ENSGT00940000162109.C	ENSGT00940000162756.n
Mus_A	ANCESTRAL SPECIES	18	ENSGT00940000154829.c	ENSGT00950000182952.A.b.w.b	ENSGT00950000182952.A.b.w.a	ENSGT00390000002429	ENSGT00390000001844.a.a	ENSGT00940000159353	ENSGT00940000157860	ENSGT00940000156271	ENSGT00940000160634	ENSGT00390000008902	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073 #22	ENSGT00390000016055 #23	ENSGT00390000007224.b #24	ENSGT00940000156013 #25	ENSGT00550000074783 #26	ENSGT00940000164659	ENSGT00940000158923 #28	ENSGT00940000156253 #29	ENSGT00940000162550 #31	ENSGT00940000159077 #32	ENSGT00390000001157.A.a #33	ENSGT00860000134598 #34	ENSGT00730000111511 #35	ENSGT00730000111539 #36	ENSGT00940000162109.C	ENSGT00940000162756.n
Mus_B	ANCESTRAL SPECIES	18	ENSGT00940000154829.c	ENSGT00950000182952.A.b.w.b	ENSGT00950000182952.A.b.w.a	ENSGT00390000002429	ENSGT00390000001844.a.a	ENSGT00940000159353	ENSGT00940000157860	ENSGT00940000156271	ENSGT00940000160634	ENSGT00390000008902	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073 #22	ENSGT00390000016055 #23	ENSGT00390000007224.b #24	ENSGT00940000156013 #25	ENSGT00550000074783 #26	ENSGT00940000164659	ENSGT00940000158923 #28	ENSGT00940000156253 #29	ENSGT00940000162550 #31	ENSGT00940000159077 #32	ENSGT00390000001157.A.a #33	ENSGT00860000134598 #34	ENSGT00730000111511 #35	ENSGT00730000111539 #36	ENSGT00940000162109.C	ENSGT00940000162756.n
Mus_C	ANCESTRAL SPECIES	12	ENSGT00940000154829.c	ENSGT00950000182952.A.b.w.b	ENSGT00950000182952.A.b.w.a	ENSGT00390000002429	ENSGT00390000001844.a.a	ENSGT00940000159353	ENSGT00940000157860	ENSGT00940000156271	ENSGT00940000160634	ENSGT00390000008902	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073 #22	ENSGT00390000016055 #23	ENSGT00390000007224.b #24	ENSGT00940000156013 #25	ENSGT00550000074783 #26	ENSGT00770000120675 #27	ENSGT00940000164659	ENSGT00940000158923 #28	ENSGT00940000156253 #29	ENSGT00940000162550 #31	ENSGT00940000159077 #32	ENSGT00390000001157.A.a #33	ENSGT00860000134598 #34	ENSGT00730000111511 #35	ENSGT00730000111539 #36	ENSGT00940000162109.C
Steppe mouse	MODERN SPECIES	3273																N6amt1 (ENSMSIG00000013117) #22	Ltn1 (ENSMSIG00000012949) #23	Rwdd2b (ENSMSIG00000012918) #24	Usp16 (ENSMSIG00000012823) #25	Cct8 (ENSMSIG00000012682) #26	ENSMSIG00000012654 #27	Bach1 (ENSMSIG00000012636) #28	Grik1 (ENSMSIG00000012264) #29	ENSMSIG00000012245 #30	Cldn17 (ENSMSIG00000012238) #31	Cldn8 (ENSMSIG00000012231) #32	Krtap24-1 (ENSMSIG00000012229) #33	2310079G19Rik (ENSMSIG00000012210) #34	Krtap26-1 (ENSMSIG00000012203) #35	Krtap27-1 (ENSMSIG00000012189) #36	ENSMSIG00000012180 #37
spretus	MODERN SPECIES	7	MGP_SPRETEiJ_G0021787	Btg3 (MGP_SPRETEiJ_G0021788)	D16Ertd472e (MGP_SPRETEiJ_G0021789)	Chodl (MGP_SPRETEiJ_G0021790)	Tmprss15 (MGP_SPRETEiJ_G0021791)	Ncam2 (MGP_SPRETEiJ_G0021792)	Mrpl39 (MGP_SPRETEiJ_G0021793)	Jam2 (MGP_SPRETEiJ_G0021794)	Atp5j (MGP_SPRETEiJ_G0021795)	Gabpa (MGP_SPRETEiJ_G0021796)	App (MGP_SPRETEiJ_G0021797)	Cyyr1 (MGP_SPRETEiJ_G0021798)	MGP_SPRETEiJ_G0021799	Adamts1 (MGP_SPRETEiJ_G0021800)	Adamts5 (MGP_SPRETEiJ_G0021801)	N6amt1 (MGP_SPRETEiJ_G0021802) #22	Ltn1 (MGP_SPRETEiJ_G0021803) #23	Rwdd2b (MGP_SPRETEiJ_G0021804) #24	Usp16 (MGP_SPRETEiJ_G0021805) #25	Cct8 (MGP_SPRETEiJ_G0021806) #26	Map3k7cl (MGP_SPRETEiJ_G0021807)	Bach1 (MGP_SPRETEiJ_G0021808) #28	Grik1 (MGP_SPRETEiJ_G0021809) #29	Cldn17 (MGP_SPRETEiJ_G0021810) #31	Cldn8 (MGP_SPRETEiJ_G0021811) #32	Krtap24-1 (MGP_SPRETEiJ_G0021812) #33	2310079G19Rik (MGP_SPRETEiJ_G0021813) #34	Krtap26-1 (MGP_SPRETEiJ_G0021814) #35	Krtap27-1 (MGP_SPRETEiJ_G0021815) #36	2310061N02Rik (MGP_SPRETEiJ_G0021816)	Krtap13-1 (MGP_SPRETEiJ_G0021817)
Mouse	MODERN SPECIES	7	Usp25 (ENSMUSG00000022867)	Cxadr (ENSMUSG00000022865)	Btg3 (ENSMUSG00000022863)	D16Ertd472e (ENSMUSG00000022864)	Chodl (ENSMUSG00000022860)	Tmprss15 (ENSMUSG00000022857)	Ncam2 (ENSMUSG00000022762)	Mrpl39 (ENSMUSG00000022889)	Jam2 (ENSMUSG00000053062)	Atp5j (ENSMUSG00000022890)	Gabpa (ENSMUSG00000008976)	App (ENSMUSG00000022892)	Cyyr1 (ENSMUSG00000041134)	Adamts1 (ENSMUSG00000022893)	Adamts5 (ENSMUSG00000022894)	N6amt1 (ENSMUSG00000044442) #22	Ltn1 (ENSMUSG00000052299) #23	Rwdd2b (ENSMUSG00000041079) #24	Usp16 (ENSMUSG00000025616) #25	Cct8 (ENSMUSG00000025613) #26	Map3k7cl (ENSMUSG00000025610)	Bach1 (ENSMUSG00000025612) #28	Grik1 (ENSMUSG00000022935) #29	Cldn17 (ENSMUSG00000055811) #31	Cldn8 (ENSMUSG00000050520) #32	Krtap24-1 (ENSMUSG00000050239) #33	2310079G19Rik (ENSMUSG00000045331) #34	Krtap26-1 (ENSMUSG00000071471) #35	Krtap27-1 (ENSMUSG00000090515) #36	2310061N02Rik (ENSMUSG00000050704)	Krtap13-1 (ENSMUSG00000056350)
Ryukyu mouse	MODERN SPECIES	7	Cxadr (MGP_CAROLIEiJ_G0020881)	MGP_CAROLIEiJ_G0020882	Btg3 (MGP_CAROLIEiJ_G0020883)	D16Ertd472e (MGP_CAROLIEiJ_G0020884)	Chodl (MGP_CAROLIEiJ_G0020885)	Tmprss15 (MGP_CAROLIEiJ_G0020886)	Ncam2 (MGP_CAROLIEiJ_G0020887)	Mrpl39 (MGP_CAROLIEiJ_G0020888)	Jam2 (MGP_CAROLIEiJ_G0020889)	Atp5j (MGP_CAROLIEiJ_G0020890)	Gabpa (MGP_CAROLIEiJ_G0020891)	App (MGP_CAROLIEiJ_G0020892)	Cyyr1 (MGP_CAROLIEiJ_G0020893)	Adamts1 (MGP_CAROLIEiJ_G0020894)	Adamts5 (MGP_CAROLIEiJ_G0020895)	N6amt1 (MGP_CAROLIEiJ_G0020896) #22	Ltn1 (MGP_CAROLIEiJ_G0020897) #23	Rwdd2b (MGP_CAROLIEiJ_G0020898) #24	Usp16 (MGP_CAROLIEiJ_G0020899) #25	Cct8 (MGP_CAROLIEiJ_G0020900) #26	Map3k7cl (MGP_CAROLIEiJ_G0020901)	Bach1 (MGP_CAROLIEiJ_G0020902) #28	Grik1 (MGP_CAROLIEiJ_G0020903) #29	Cldn17 (MGP_CAROLIEiJ_G0020904) #31	Cldn8 (MGP_CAROLIEiJ_G0020905) #32	Krtap24-1 (MGP_CAROLIEiJ_G0020906) #33	2310079G19Rik (MGP_CAROLIEiJ_G0020907) #34	Krtap26-1 (MGP_CAROLIEiJ_G0020908) #35	Krtap27-1 (MGP_CAROLIEiJ_G0020909) #36	2310061N02Rik (MGP_CAROLIEiJ_G0020910)	Krtap13-1 (MGP_CAROLIEiJ_G0020911)
Shrew mouse	MODERN SPECIES	3	Cxadr (MGP_PahariEiJ_G0016585)	MGP_PahariEiJ_G0016586	MGP_PahariEiJ_G0016587	D16Ertd472e (MGP_PahariEiJ_G0016588)	Chodl (MGP_PahariEiJ_G0016589)	Tmprss15 (MGP_PahariEiJ_G0016590)	Ncam2 (MGP_PahariEiJ_G0016591)	Mrpl39 (MGP_PahariEiJ_G0016592)	Jam2 (MGP_PahariEiJ_G0016593)	Atp5j (MGP_PahariEiJ_G0016594)	Gabpa (MGP_PahariEiJ_G0016595)	App (MGP_PahariEiJ_G0016596)	Cyyr1 (MGP_PahariEiJ_G0016597)	Adamts1 (MGP_PahariEiJ_G0016598)	Adamts5 (MGP_PahariEiJ_G0016599)	N6amt1 (MGP_PahariEiJ_G0016600) #22	Ltn1 (MGP_PahariEiJ_G0016601) #23	Rwdd2b (MGP_PahariEiJ_G0016602) #24	Usp16 (MGP_PahariEiJ_G0016603) #25	Cct8 (MGP_PahariEiJ_G0016604) #26	Map3k7cl (MGP_PahariEiJ_G0016605)	Bach1 (MGP_PahariEiJ_G0016606) #28	Grik1 (MGP_PahariEiJ_G0016607) #29	Cldn17 (MGP_PahariEiJ_G0016608) #31	Cldn8 (MGP_PahariEiJ_G0016609) #32	Krtap24-1 (MGP_PahariEiJ_G0016610) #33	2310079G19Rik (MGP_PahariEiJ_G0016611) #34	Krtap26-1 (MGP_PahariEiJ_G0016612) #35	Krtap27-1 (MGP_PahariEiJ_G0016613) #36	2310061N02Rik (MGP_PahariEiJ_G0016614)	Krtap13-1 (MGP_PahariEiJ_G0016615)