Rodentia ANCESTRAL SPECIES 14 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000158551.k.b ENSGT00910000148484 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00940000163732 Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000158551.k.b ENSGT00910000148484 ENSGT00940000162473 #12 ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00940000163732 Hystricomorpha ANCESTRAL SPECIES 28 ENSGT01050000244976.b.b.b.a.a.b #7 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00940000163732 Hystricomorpha_a ANCESTRAL SPECIES 32 ENSGT01050000244976.b.b.b.a.a.b #7 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 Hystricomorpha_b ANCESTRAL SPECIES 28 ENSGT01050000244976.b.b.b.a.a.b #7 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00900000141059 #13 ENSGT00940000155098.r #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 Long-tailed chinchilla MODERN SPECIES 249 MAB21L4 (ENSCLAG00000002824) #7 CROCC2 (ENSCLAG00000002724) #8 SNED1 (ENSCLAG00000002607) #9 MTERF4 (ENSCLAG00000002565) #10 PASK (ENSCLAG00000002519) #11 ENSCLAG00000002485 #12 HDLBP (ENSCLAG00000002365) #13 ENSCLAG00000002255 #14 FARP2 (ENSCLAG00000002135) #15 STK25 (ENSCLAG00000002040) #16 BOK (ENSCLAG00000002024) #17 ENSCLAG00000002013 #18 THAP4 (ENSCLAG00000002361) #19 ATG4B (ENSCLAG00000002262) #20 DTYMK (ENSCLAG00000002150) #21 ING5 (ENSCLAG00000002116) #22 D2HGDH (ENSCLAG00000001990) #23 GAL3ST2 (ENSCLAG00000001967) #24 NEU4 (ENSCLAG00000001894) #25 PDCD1 (ENSCLAG00000001882) #26 Degu DUPLICATION Degu MODERN SPECIES 130 MAB21L4 (ENSODEG00000009520) #7 CROCC2 (ENSODEG00000013957) #8 SNED1 (ENSODEG00000009052) #9 MTERF4 (ENSODEG00000010009) #10 PASK (ENSODEG00000011073) #11 ENSODEG00000011577 #12 ENSODEG00000012313 #13 ENSODEG00000010316 #14 ENSODEG00000019687 FARP2 (ENSODEG00000010817) #15 STK25 (ENSODEG00000010648) #16 BOK (ENSODEG00000011482) #17 THAP4 (ENSODEG00000010347) #19 ENSODEG00000009790 #20 DTYMK (ENSODEG00000010346) #21 ENSODEG00000011084 #22 D2HGDH (ENSODEG00000010827) #23 GAL3ST2 (ENSODEG00000009766) #24 NEU4 (ENSODEG00000012075) #25 PDCD1 (ENSODEG00000011912) #26 Degu MODERN SPECIES 49 ENSODEG00000018196 ATP2C1 (ENSODEG00000018139) ASTE1 (ENSODEG00000018421) NEK11 (ENSODEG00000018206) ENSODEG00000018084 ENSODEG00000018115 ENSODEG00000018142 CPNE4 (ENSODEG00000018164) ACP3 (ENSODEG00000018182) DNAJC13 (ENSODEG00000018220) ACKR4 (ENSODEG00000020509) ACAD11 (ENSODEG00000018150) UBA5 (ENSODEG00000018085) NPHP3 (ENSODEG00000018155) ENSODEG00000018072 ENSODEG00000018102 #22 TMEM108 (ENSODEG00000018277) BFSP2 (ENSODEG00000018198) ENSODEG00000018145 TOPBP1 (ENSODEG00000018175) ENSODEG00000018181 ENSODEG00000018153 ENSODEG00000018163 SRPRB (ENSODEG00000018092) ENSODEG00000018232 SLCO2A1 (ENSODEG00000018096) ENSODEG00000018160 ENSODEG00000018123 ENSODEG00000018135 ENSODEG00000018127 ENSODEG00000018057 Guinea pig MODERN SPECIES 13 CROCC2 (ENSCPOG00000025037) #8 SNED1 (ENSCPOG00000006265) #9 MTERF4 (ENSCPOG00000025700) #10 PASK (ENSCPOG00000006277) #11 PPP1R7 (ENSCPOG00000006285) HDLBP (ENSCPOG00000006297) #13 ENSCPOG00000013687 #14 ENSCPOG00000038694 FARP2 (ENSCPOG00000013335) #15 STK25 (ENSCPOG00000022798) #16 ENSCPOG00000025899 BOK (ENSCPOG00000030494) #17 THAP4 (ENSCPOG00000022107) #19 ATG4B (ENSCPOG00000000135) #20 DTYMK (ENSCPOG00000023727) #21 ING5 (ENSCPOG00000038093) #22 D2HGDH (ENSCPOG00000000007) #23 ENSCPOG00000005952 #24 ENSCPOG00000002229 #24 NEU4 (ENSCPOG00000007330) #25 PDCD1 (ENSCPOG00000037292) #26 ENSCPOG00000038878 ENSCPOG00000034749 ENSCPOG00000024854 ENSCPOG00000001586 ENSCPOG00000011923 ENSCPOG00000025453 ENSCPOG00000013424 OR11H4 (ENSCPOG00000011891) ENSCPOG00000007078 PARP2 (ENSCPOG00000022667) Naked mole-rat female MODERN SPECIES 30 CROCC2 (ENSHGLG00000003416) #8 SNED1 (ENSHGLG00000003686) #9 MTERF4 (ENSHGLG00000003898) #10 PASK (ENSHGLG00000004004) #11 PPP1R7 (ENSHGLG00000004117) HDLBP (ENSHGLG00000004910) #13 ENSHGLG00000005291 #14 FARP2 (ENSHGLG00000015024) #15 ENSHGLG00000042172 ENSHGLG00000014130 STK25 (ENSHGLG00000015089) #16 BOK (ENSHGLG00000015101) #17 THAP4 (ENSHGLG00000015125) #19 ATG4B (ENSHGLG00000018630) #20 DTYMK (ENSHGLG00000018717) #21 ING5 (ENSHGLG00000037490) #22 D2HGDH (ENSHGLG00000003119) #23 GAL3ST2 (ENSHGLG00000003311) #24 NEU4 (ENSHGLG00000003691) #25 PDCD1 (ENSHGLG00000032677) #26 ENSHGLG00000004109 ENSHGLG00000038816 ENSHGLG00000000610 ENSHGLG00000041212 TSPYL4 (ENSHGLG00000036673) DSE (ENSHGLG00000041966) CALHM6 (ENSHGLG00000033792) TRAPPC3L (ENSHGLG00000002142) CALHM5 (ENSHGLG00000035655) CALHM4 (ENSHGLG00000002679) ENSHGLG00000002331 Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00910000148484 ENSGT00940000162473 #12 ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00940000163732 Marmotini ANCESTRAL SPECIES 2 ENSGT01050000244976.b.b.b.a.a.b #7 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00910000148484 ENSGT00940000162473 #12 ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00940000163732 ENSGT00940000165655 Marmotini_b ANCESTRAL SPECIES 41 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b #7 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00940000163732 ENSGT00940000165655 Arctic ground squirrel MODERN SPECIES 972 BOK (ENSUPAG00010003241) #17 THAP4 (ENSUPAG00010003245) #19 ATG4B (ENSUPAG00010003261) #20 DTYMK (ENSUPAG00010003278) #21 ENSUPAG00010003293 ING5 (ENSUPAG00010003300) #22 D2HGDH (ENSUPAG00010003310) #23 Squirrel MODERN SPECIES 345 ENSSTOG00000027909 GPR35 (ENSSTOG00000026086) ENSSTOG00000022231 KIF1A (ENSSTOG00000021868) AGXT (ENSSTOG00000008004) MAB21L4 (ENSSTOG00000006007) #7 SNED1 (ENSSTOG00000031779) #9 ENSSTOG00000016306 #12 HDLBP (ENSSTOG00000013331) #13 SEPTIN2 (ENSSTOG00000013357) #14 FARP2 (ENSSTOG00000022815) #15 STK25 (ENSSTOG00000026742) #16 BOK (ENSSTOG00000028135) #17 THAP4 (ENSSTOG00000015998) #19 ATG4B (ENSSTOG00000014734) #20 ING5 (ENSSTOG00000005977) #22 D2HGDH (ENSSTOG00000023380) #23 PDCD1 (ENSSTOG00000022396) #26 ENSSTOG00000025755 Eurasian red squirrel MODERN SPECIES 12 CROCC2 (ENSSVLG00005010408) #8 SNED1 (ENSSVLG00005010615) #9 MTERF4 (ENSSVLG00005010874) #10 ENSSVLG00005010962 #11 ENSSVLG00005011084 ENSSVLG00005011132 #12 HDLBP (ENSSVLG00005011227) #13 ENSSVLG00005011546 #14 FARP2 (ENSSVLG00005011791) #15 STK25 (ENSSVLG00005011880) #16 BOK (ENSSVLG00005012052) #17 THAP4 (ENSSVLG00005012097) #19 ENSSVLG00005012212 #18 ATG4B (ENSSVLG00005012261) #20 DTYMK (ENSSVLG00005012417) #21 ING5 (ENSSVLG00005012450) #22 D2HGDH (ENSSVLG00005012513) #23 GAL3ST2 (ENSSVLG00005012622) #24 NEU4 (ENSSVLG00005012671) #25 PDCD1 (ENSSVLG00005012721) #26 ENSSVLG00005012795 PRDM9 (ENSSVLG00005012896) Rodentia_B ANCESTRAL SPECIES 12 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 Myomorpha ANCESTRAL SPECIES 10 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 Muroidea ANCESTRAL SPECIES 20 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059 #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 Muroidea_A ANCESTRAL SPECIES 19 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d.b ENSGT00940000156369 ENSGT00940000160670 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00530000064469 ENSGT00940000157592 ENSGT00940000157299 Cricetidae ANCESTRAL SPECIES 19 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.b ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d.a ENSGT00940000156369 ENSGT00940000160670 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00530000064469 ENSGT00940000157592 ENSGT00940000157299 Cricetinae ANCESTRAL SPECIES 3 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000158551.k.b ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT00940000156369 ENSGT00940000160670 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00530000064469 ENSGT00940000157592 ENSGT00940000157299 ENSGT00940000156973 Chinese hamster chok1gshd MODERN SPECIES 1 Crocc2 (ENSCGRG00001010820) #8 Sned1 (ENSCGRG00001002826) #9 Mterf4 (ENSCGRG00001006818) #10 Pask (ENSCGRG00001024785) #11 ENSCGRG00001001852 Ano7 (ENSCGRG00001006513) Hdlbp (ENSCGRG00001006086) #13 ENSCGRG00001009996 #14 Farp2 (ENSCGRG00001003923) #15 Stk25 (ENSCGRG00001005671) #16 Bok (ENSCGRG00001024808) #17 Thap4 (ENSCGRG00001002632) #19 ENSCGRG00001006751 #18 Atg4b (ENSCGRG00001001760) #20 Dtymk (ENSCGRG00001000666) #21 Ing5 (ENSCGRG00001004863) #22 D2hgdh (ENSCGRG00001002513) #23 ENSCGRG00001000728 #24 Neu4 (ENSCGRG00001009931) #25 Pdcd1 (ENSCGRG00001002477) #26 Fam174a (ENSCGRG00001002695) ENSCGRG00001010345 St8sia4 (ENSCGRG00001004612) ENSCGRG00001004644 ENSCGRG00001003799 Slco4c1 (ENSCGRG00001010874) ENSCGRG00001010780 Pam (ENSCGRG00001011006) Gin1 (ENSCGRG00001004458) Ppip5k2 (ENSCGRG00001002274) Macir (ENSCGRG00001009855) Golden Hamster MODERN SPECIES 686 Crocc2 (ENSMAUG00000019614) #8 Sned1 (ENSMAUG00000017367) #9 Mterf4 (ENSMAUG00000000081) #10 Pask (ENSMAUG00000018648) #11 ENSMAUG00000013558 Ano7 (ENSMAUG00000013132) Hdlbp (ENSMAUG00000017743) #13 ENSMAUG00000011950 #14 Farp2 (ENSMAUG00000013770) #15 Stk25 (ENSMAUG00000009418) #16 Bok (ENSMAUG00000011149) #17 ENSMAUG00000009008 #19 Atg4b (ENSMAUG00000002031) #20 Dtymk (ENSMAUG00000000268) #21 ENSMAUG00000012792 #21 Ing5 (ENSMAUG00000010995) #22 D2hgdh (ENSMAUG00000008991) #23 ENSMAUG00000006662 ENSMAUG00000018549 Neu4 (ENSMAUG00000004468) #25 Pdcd1 (ENSMAUG00000000914) #26 Fam174a (ENSMAUG00000010921) St8sia4 (ENSMAUG00000008068) Slco4c1 (ENSMAUG00000016086) ENSMAUG00000016737 Pam (ENSMAUG00000013243) Gin1 (ENSMAUG00000014864) Macir (ENSMAUG00000013352) ENSMAUG00000018117 Nudt12 (ENSMAUG00000010818) Efna5 (ENSMAUG00000016198) Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d.a ENSGT00940000156369 ENSGT00940000160670 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00530000064469 ENSGT00940000157592 ENSGT00940000157299 Northern American deer mouse MODERN SPECIES 4 Crocc2 (ENSPEMG00000014619) #8 Sned1 (ENSPEMG00000008505) #9 Mterf4 (ENSPEMG00000026952) #10 Pask (ENSPEMG00000022938) #11 Ppp1r7 (ENSPEMG00000001859) #12 Ano7 (ENSPEMG00000011761) Hdlbp (ENSPEMG00000017704) #13 ENSPEMG00000022937 #14 Farp2 (ENSPEMG00000023787) #15 Stk25 (ENSPEMG00000023590) #16 Bok (ENSPEMG00000023399) #17 Thap4 (ENSPEMG00000022638) #19 ENSPEMG00000002288 #18 Atg4b (ENSPEMG00000023843) #20 Dtymk (ENSPEMG00000023813) #21 Ing5 (ENSPEMG00000021508) #22 D2hgdh (ENSPEMG00000021435) #23 ENSPEMG00000013727 #24 Neu4 (ENSPEMG00000022695) #25 Pdcd1 (ENSPEMG00000010110) #26 ENSPEMG00000028919 ENSPEMG00000001999 ENSPEMG00000013367 Fam174a (ENSPEMG00000023963) St8sia4 (ENSPEMG00000025143) Slco4c1 (ENSPEMG00000020395) ENSPEMG00000030212 ENSPEMG00000017201 ENSPEMG00000014680 Pam (ENSPEMG00000008719) Gin1 (ENSPEMG00000028100) Prairie vole MODERN SPECIES 354 Crocc2 (ENSMOCG00000017827) #8 Sned1 (ENSMOCG00000002594) #9 Mterf4 (ENSMOCG00000010203) #10 Pask (ENSMOCG00000016982) #11 ENSMOCG00000012798 Ano7 (ENSMOCG00000000907) Hdlbp (ENSMOCG00000006679) #13 ENSMOCG00000014906 #14 Farp2 (ENSMOCG00000021782) #15 Stk25 (ENSMOCG00000017547) #16 Bok (ENSMOCG00000016270) #17 ENSMOCG00000014492 #19 Atg4b (ENSMOCG00000013012) #20 Dtymk (ENSMOCG00000006228) #21 ENSMOCG00000005204 #21 Ing5 (ENSMOCG00000014178) #22 D2hgdh (ENSMOCG00000020154) #23 ENSMOCG00000007726 #24 Neu4 (ENSMOCG00000016739) #25 Pdcd1 (ENSMOCG00000014895) #26 ENSMOCG00000003363 Fam174a (ENSMOCG00000015018) St8sia4 (ENSMOCG00000013060) ENSMOCG00000009291 ENSMOCG00000006288 Slco4c1 (ENSMOCG00000004368) ENSMOCG00000018358 ENSMOCG00000006301 Pam (ENSMOCG00000012283) Gin1 (ENSMOCG00000021884) Ppip5k2 (ENSMOCG00000020966) Murinae ANCESTRAL SPECIES 9 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d.b.b ENSGT01080000257410.D.d.b.a ENSGT00940000156369 ENSGT00940000160670 ENSGT00390000009048.a.b ENSGT00390000005782 ENSGT00530000064469 ENSGT00940000157592 Mus ANCESTRAL SPECIES 5 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d.b.b ENSGT00390000005782 ENSGT00390000009048.a.b ENSGT00940000160670 ENSGT00940000156369 ENSGT01080000257410.D.d.b.a ENSGT00940000158167 ENSGT00730000111317 Mus_A ANCESTRAL SPECIES 5 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d.b.b ENSGT00390000005782 ENSGT00390000009048.a.b ENSGT00940000160670 ENSGT00940000156369 ENSGT01080000257410.D.d.b.a ENSGT00940000164023.c.b ENSGT00940000158167 Mus_B ANCESTRAL SPECIES 7 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT00950000182923.B.a.bb #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d.b.b ENSGT00390000005782 ENSGT00390000009048.a.b ENSGT00940000160670 ENSGT00940000156369 ENSGT01080000257410.D.d.b.a ENSGT00940000164023.c.b ENSGT00940000158167 Mus_C ANCESTRAL SPECIES 1 ENSGT00940000162689 #8 ENSGT00940000160730 #9 ENSGT00460000041648 #10 ENSGT00940000159035 #11 ENSGT00940000162473 #12 ENSGT00940000158551.k.a ENSGT00900000141059.z #13 ENSGT00940000155098 #14 ENSGT00940000158642 #15 ENSGT00940000153476.a #16 ENSGT01090000260100.B #17 ENSGT00940000158447 #19 ENSGT00900000143170 #18 ENSGT00530000063000.a.b.b #20 ENSGT00940000154030.a.a #21 ENSGT00940000158159 #22 ENSGT00550000075086 #23 ENSGT01050000247607 ENSGT00950000182923.B.a.bb #24 ENSGT00950000182944.B.a #25 ENSGT00390000013662 #26 ENSGT00730000111385 ENSGT01030000234535.F.b ENSGT01080000257410.D.c ENSGT01080000257410.D.d.b.b ENSGT00390000005782 ENSGT00390000009048.a.b ENSGT00940000160670 ENSGT00940000156369 ENSGT01080000257410.D.d.b.a ENSGT00940000164023.c.b spretus MODERN SPECIES Mab21l4 (MGP_SPRETEiJ_G0015253) #7 Crocc2 (MGP_SPRETEiJ_G0015254) #8 Sned1 (MGP_SPRETEiJ_G0015255) #9 Mterf4 (MGP_SPRETEiJ_G0015256) #10 Pask (MGP_SPRETEiJ_G0015257) #11 Ppp1r7 (MGP_SPRETEiJ_G0015258) #12 Ano7 (MGP_SPRETEiJ_G0015259) Hdlbp (MGP_SPRETEiJ_G0015260) #13 MGP_SPRETEiJ_G0015261 #14 Farp2 (MGP_SPRETEiJ_G0015262) #15 Stk25 (MGP_SPRETEiJ_G0015263) #16 Bok (MGP_SPRETEiJ_G0015264) #17 Thap4 (MGP_SPRETEiJ_G0015265) #19 Atg4b (MGP_SPRETEiJ_G0015266) #20 Dtymk (MGP_SPRETEiJ_G0015267) #21 Ing5 (MGP_SPRETEiJ_G0015268) #22 D2hgdh (MGP_SPRETEiJ_G0015269) #23 MGP_SPRETEiJ_G0015270 MGP_SPRETEiJ_G0015271 #24 MGP_SPRETEiJ_G0015272 #24 Neu4 (MGP_SPRETEiJ_G0015273) #25 Pdcd1 (MGP_SPRETEiJ_G0015274) #26 Fam174a (MGP_SPRETEiJ_G0015275) St8sia4 (MGP_SPRETEiJ_G0015276) Slco4c1 (MGP_SPRETEiJ_G0015277) MGP_SPRETEiJ_G0015278 Macir (MGP_SPRETEiJ_G0015279) Ppip5k2 (MGP_SPRETEiJ_G0015280) Gin1 (MGP_SPRETEiJ_G0015281) Pam (MGP_SPRETEiJ_G0015282) MGP_SPRETEiJ_G0015283 Steppe mouse MODERN SPECIES 2151 ENSMSIG00000015660 #15 ENSMSIG00000015638 #16 Bok (ENSMSIG00000015629) #17 ENSMSIG00000015626 #18 Thap4 (ENSMSIG00000015596) #19 Atg4b (ENSMSIG00000015526) #20 Dtymk (ENSMSIG00000015486) #21 Ing5 (ENSMSIG00000015435) #22 ENSMSIG00000015376 #23 Mouse MODERN SPECIES Crocc2 (ENSMUSG00000084989) #8 Sned1 (ENSMUSG00000047793) #9 Mterf4 (ENSMUSG00000026273) #10 Pask (ENSMUSG00000026274) #11 Ppp1r7 (ENSMUSG00000026275) #12 Ano7 (ENSMUSG00000034107) Hdlbp (ENSMUSG00000034088) #13 Septin2 (ENSMUSG00000026276) #14 Septin2 (ENSMUSG00000116048) #14 Farp2 (ENSMUSG00000034066) #15 Stk25 (ENSMUSG00000026277) #16 Bok (ENSMUSG00000026278) #17 Thap4 (ENSMUSG00000026279) #19 Atg4b (ENSMUSG00000026280) #20 Dtymk (ENSMUSG00000026281) #21 Ing5 (ENSMUSG00000026283) #22 D2hgdh (ENSMUSG00000073609) #23 Gal3st2 (ENSMUSG00000094651) #24 Gal3st2b (ENSMUSG00000093805) #24 Gal3st2c (ENSMUSG00000073608) #24 Neu4 (ENSMUSG00000034000) #25 Pdcd1 (ENSMUSG00000026285) #26 Fam174a (ENSMUSG00000051185) St8sia4 (ENSMUSG00000040710) Slco4c1 (ENSMUSG00000040693) Slco6c1 (ENSMUSG00000026331) Macir (ENSMUSG00000044768) Ppip5k2 (ENSMUSG00000040648) Gin1 (ENSMUSG00000026333) Pam (ENSMUSG00000026335) Slco6d1 (ENSMUSG00000026336) Ryukyu mouse MODERN SPECIES Mab21l4 (MGP_CAROLIEiJ_G0014449) #7 Crocc2 (MGP_CAROLIEiJ_G0014450) #8 Sned1 (MGP_CAROLIEiJ_G0014451) #9 Mterf4 (MGP_CAROLIEiJ_G0014452) #10 Pask (MGP_CAROLIEiJ_G0014453) #11 Ppp1r7 (MGP_CAROLIEiJ_G0014454) #12 Ano7 (MGP_CAROLIEiJ_G0014455) Hdlbp (MGP_CAROLIEiJ_G0014456) #13 MGP_CAROLIEiJ_G0014457 #14 Farp2 (MGP_CAROLIEiJ_G0014458) #15 Stk25 (MGP_CAROLIEiJ_G0014459) #16 Bok (MGP_CAROLIEiJ_G0014460) #17 Thap4 (MGP_CAROLIEiJ_G0014461) #19 Atg4b (MGP_CAROLIEiJ_G0014462) #20 Dtymk (MGP_CAROLIEiJ_G0014463) #21 Ing5 (MGP_CAROLIEiJ_G0014464) #22 D2hgdh (MGP_CAROLIEiJ_G0014465) #23 MGP_CAROLIEiJ_G0014466 #24 MGP_CAROLIEiJ_G0014467 #24 MGP_CAROLIEiJ_G0014468 #24 Neu4 (MGP_CAROLIEiJ_G0014469) #25 Pdcd1 (MGP_CAROLIEiJ_G0014470) #26 Fam174a (MGP_CAROLIEiJ_G0014471) St8sia4 (MGP_CAROLIEiJ_G0014472) Slco4c1 (MGP_CAROLIEiJ_G0014473) Slco6c1 (MGP_CAROLIEiJ_G0014474) Macir (MGP_CAROLIEiJ_G0014475) Ppip5k2 (MGP_CAROLIEiJ_G0014476) Gin1 (MGP_CAROLIEiJ_G0014477) Pam (MGP_CAROLIEiJ_G0014478) MGP_CAROLIEiJ_G0014479 Shrew mouse MODERN SPECIES 18 Mab21l4 (MGP_PahariEiJ_G0027685) #7 Crocc2 (MGP_PahariEiJ_G0027686) #8 Sned1 (MGP_PahariEiJ_G0027687) #9 Mterf4 (MGP_PahariEiJ_G0027688) #10 Pask (MGP_PahariEiJ_G0027689) #11 Ppp1r7 (MGP_PahariEiJ_G0027690) #12 Ano7 (MGP_PahariEiJ_G0027691) Hdlbp (MGP_PahariEiJ_G0027692) #13 MGP_PahariEiJ_G0027693 #14 Farp2 (MGP_PahariEiJ_G0027694) #15 Stk25 (MGP_PahariEiJ_G0027695) #16 Bok (MGP_PahariEiJ_G0027696) #17 Thap4 (MGP_PahariEiJ_G0027697) #19 Atg4b (MGP_PahariEiJ_G0027698) #20 Dtymk (MGP_PahariEiJ_G0027699) #21 Ing5 (MGP_PahariEiJ_G0027700) #22 D2hgdh (MGP_PahariEiJ_G0027701) #23 MGP_PahariEiJ_G0027702 #24 MGP_PahariEiJ_G0027703 #24 MGP_PahariEiJ_G0027704 #24 Neu4 (MGP_PahariEiJ_G0027705) #25 Pdcd1 (MGP_PahariEiJ_G0027706) #26 Fam174a (MGP_PahariEiJ_G0027707) St8sia4 (MGP_PahariEiJ_G0027708) Slco4c1 (MGP_PahariEiJ_G0027709) MGP_PahariEiJ_G0027710 Macir (MGP_PahariEiJ_G0027711) Ppip5k2 (MGP_PahariEiJ_G0027712) Gin1 (MGP_PahariEiJ_G0027713) Pam (MGP_PahariEiJ_G0027714) Cdh20 (MGP_PahariEiJ_G0027715) Rat MODERN SPECIES 19 Mterf4 (ENSRNOG00000037376) #10 Pask (ENSRNOG00000016888) #11 LOC102549694 (ENSRNOG00000066227) AABR07068351.1 (ENSRNOG00000016974) Ano7 (ENSRNOG00000023427) Hdlbp (ENSRNOG00000031479) #13 Septin2 (ENSRNOG00000017952) #14 LOC100362040 (ENSRNOG00000030738) Farp2 (ENSRNOG00000018051) #15 Stk25 (ENSRNOG00000018181) #16 Bok (ENSRNOG00000018214) #17 Thap4 (ENSRNOG00000018351) #19 AC109427.1 (ENSRNOG00000056259) #18 Atg4b (ENSRNOG00000018403) #20 Dtymk (ENSRNOG00000018904) #21 Ing5 (ENSRNOG00000018988) #22 D2hgdh (ENSRNOG00000019012) #23 Gal3st2c (ENSRNOG00000070509) #24 Neu4 (ENSRNOG00000019031) #25 Pdcd1 (ENSRNOG00000019043) #26 Chchd2l3 (ENSRNOG00000051180) Fam174a (ENSRNOG00000019087) ENSRNOG00000062997 St8sia4 (ENSRNOG00000019128) Slco4c1 (ENSRNOG00000022711) Slco6b1 (ENSRNOG00000019252) AABR07068417.1 (ENSRNOG00000025797) Slco6c1 (ENSRNOG00000013792) Slco6d1 (ENSRNOG00000031146) Pam (ENSRNOG00000033280) Gin1 (ENSRNOG00000011962) Upper Galilee mountains blind mole rat MODERN SPECIES 634 Mab21l4 (ENSNGAG00000012567) #7 Crocc2 (ENSNGAG00000021519) #8 Sned1 (ENSNGAG00000023743) #9 Mterf4 (ENSNGAG00000023724) #10 Pask (ENSNGAG00000007549) #11 ENSNGAG00000017337 Ano7 (ENSNGAG00000022445) Hdlbp (ENSNGAG00000014873) #13 ENSNGAG00000022412 #14 Farp2 (ENSNGAG00000004760) #15 Stk25 (ENSNGAG00000001501) #16 Bok (ENSNGAG00000023762) #17 Thap4 (ENSNGAG00000024010) #19 Atg4b (ENSNGAG00000018585) #20 Dtymk (ENSNGAG00000021440) #21 Ing5 (ENSNGAG00000023305) #22 D2hgdh (ENSNGAG00000023831) #23 Neu4 (ENSNGAG00000017190) #25 Pdcd1 (ENSNGAG00000019405) #26 Lesser Egyptian jerboa MODERN SPECIES 146 Mab21l4 (ENSJJAG00000011171) #7 Crocc2 (ENSJJAG00000005843) #8 Sned1 (ENSJJAG00000012102) #9 Mterf4 (ENSJJAG00000000477) #10 Pask (ENSJJAG00000020114) #11 Ppp1r7 (ENSJJAG00000018768) #12 Hdlbp (ENSJJAG00000003596) #13 ENSJJAG00000019868 #14 Farp2 (ENSJJAG00000011289) #15 Stk25 (ENSJJAG00000000845) #16 Bok (ENSJJAG00000022455) #17 Thap4 (ENSJJAG00000022829) #19 ENSJJAG00000019840 #20 ENSJJAG00000020306 #20 Dtymk (ENSJJAG00000016941) #21 Ing5 (ENSJJAG00000016649) #22 D2hgdh (ENSJJAG00000009431) #23 Neu4 (ENSJJAG00000003148) #25 Kangaroo rat MODERN SPECIES 492 Sned1 (ENSDORG00000023816) #9 Mterf4 (ENSDORG00000028393) #10 Pask (ENSDORG00000004572) #11 Ppp1r7 (ENSDORG00000029280) #12 ENSDORG00000011305 ENSDORG00000028840 #13 ENSDORG00000000106 #14 ENSDORG00000026265 #15 Stk25 (ENSDORG00000000110) #16 Bok (ENSDORG00000027572) #17 ENSDORG00000023457 #18 Thap4 (ENSDORG00000027598) #19 ENSDORG00000027774 #20 ENSDORG00000016601 #20 Dtymk (ENSDORG00000016603) #21 Ing5 (ENSDORG00000024121) #22 D2hgdh (ENSDORG00000004814) #23 ENSDORG00000015026 #25 Pdcd1 (ENSDORG00000029674) #26 ENSDORG00000004666