Glires ANCESTRAL SPECIES 17 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Rodentia ANCESTRAL SPECIES 18 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Rodentia_B ANCESTRAL SPECIES 13 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Myomorpha ANCESTRAL SPECIES 9 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Muroidea ANCESTRAL SPECIES 7 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Murinae ANCESTRAL SPECIES 1 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Rat DUPLICATION Rat MODERN SPECIES 13 Gzf1 (ENSRNOG00000004735) #7 Nxt1 (ENSRNOG00000004700) #8 Cd93 (ENSRNOG00000024799) #9 Thbd (ENSRNOG00000004687) #10 Sstr4 (ENSRNOG00000004641) #11 Foxa2 (ENSRNOG00000013133) #12 Pax1 (ENSRNOG00000024882) #13 Nkx2-2 (ENSRNOG00000012728) #14 Nkx2-4 (ENSRNOG00000012647) #15 Xrn2 (ENSRNOG00000011785) #16 Kiz (ENSRNOG00000025141) #17 ENSRNOG00000070752 #18 Ralgapa2 (ENSRNOG00000036964) #19 Insm1 (ENSRNOG00000068937) #20 AABR07054096.1 (ENSRNOG00000011028) #21 Crnkl1 (ENSRNOG00000010587) #22 Naa20 (ENSRNOG00000010523) #23 Rin2 (ENSRNOG00000010131) #24 Slc24a3 (ENSRNOG00000060687) #25 Scp2d1 (ENSRNOG00000009461) #26 Dtd1 (ENSRNOG00000008746) #27 Smim26 (ENSRNOG00000036971) #28 Sec23b (ENSRNOG00000008411) #29 Rbbp9 (ENSRNOG00000007972) #30 Polr3f (ENSRNOG00000007548) #31 Dzank1 (ENSRNOG00000007440) #32 Zfp133 (ENSRNOG00000027955) #33 Kat14 (ENSRNOG00000007160) #34 Ovol2 (ENSRNOG00000006850) #35 Mgme1 (ENSRNOG00000028196) #36 Snx5 (ENSRNOG00000006077) #37 Rat MODERN SPECIES 16 AABR07064590.1 (ENSRNOG00000050408) Cwf19l2 (ENSRNOG00000024372) Alkbh8 (ENSRNOG00000024525) Mtm1 (ENSRNOG00000002516) AABR07063126.1 (ENSRNOG00000002495) Crnkl1-ps1 (ENSRNOG00000040045) ##22 ENSRNOG00000067942 AABR07063082.1 (ENSRNOG00000031342) Nrxn1 (ENSRNOG00000050220) ENSRNOG00000069544 ENSRNOG00000070393 ENSRNOG00000070800 Fshr (ENSRNOG00000016783) Lhcgr (ENSRNOG00000016712) Gtf2a1l (ENSRNOG00000016703) Ston1 (ENSRNOG00000016688) Ppp1r21 (ENSRNOG00000016528) Foxn2 (ENSRNOG00000040110) H2az1-ps2 (ENSRNOG00000031564) Fbxo11 (ENSRNOG00000016396) Msh6 (ENSRNOG00000016134) Mus ANCESTRAL SPECIES 1 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 ENSGT00940000154632 #37 Shrew mouse MODERN SPECIES 16 Napb (MGP_PahariEiJ_G0025853) Gzf1 (MGP_PahariEiJ_G0025852) #7 Nxt1 (MGP_PahariEiJ_G0025851) #8 Cd93 (MGP_PahariEiJ_G0025850) #9 Thbd (MGP_PahariEiJ_G0025849) #10 Sstr4 (MGP_PahariEiJ_G0025848) #11 Foxa2 (MGP_PahariEiJ_G0025847) #12 Pax1 (MGP_PahariEiJ_G0025846) #13 Nkx2-2 (MGP_PahariEiJ_G0025845) #14 Nkx2-4 (MGP_PahariEiJ_G0025844) #15 Xrn2 (MGP_PahariEiJ_G0025843) #16 Kiz (MGP_PahariEiJ_G0025842) #17 Ralgapa2 (MGP_PahariEiJ_G0025841) #19 Insm1 (MGP_PahariEiJ_G0025840) #20 Cfap61 (MGP_PahariEiJ_G0025839) #21 Crnkl1 (MGP_PahariEiJ_G0025838) #22 Naa20 (MGP_PahariEiJ_G0025837) #23 Rin2 (MGP_PahariEiJ_G0025836) #24 MGP_PahariEiJ_G0025835 #25 Scp2d1 (MGP_PahariEiJ_G0025834) #26 Dtd1 (MGP_PahariEiJ_G0025833) #27 Smim26 (MGP_PahariEiJ_G0025832) #28 Sec23b (MGP_PahariEiJ_G0025831) #29 Rbbp9 (MGP_PahariEiJ_G0025830) #30 Polr3f (MGP_PahariEiJ_G0025829) #31 Dzank1 (MGP_PahariEiJ_G0025828) #32 Pet117 (MGP_PahariEiJ_G0025827) Kat14 (MGP_PahariEiJ_G0025826) #34 Ovol2 (MGP_PahariEiJ_G0025825) #35 Mgme1 (MGP_PahariEiJ_G0025824) #36 Snx5 (MGP_PahariEiJ_G0025823) #37 Mus_A DUPLICATION Mus_A ANCESTRAL SPECIES ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00970000195442 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931.m #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 ENSGT00940000154632 #37 Mus_B ANCESTRAL SPECIES 1 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00970000195442 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931.m #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 ENSGT00940000154632 #37 Mouse MODERN SPECIES 11 Napb (ENSMUSG00000027438) Gzf1 (ENSMUSG00000027439) #7 Nxt1 (ENSMUSG00000036992) #8 Cd93 (ENSMUSG00000027435) #9 Thbd (ENSMUSG00000074743) #10 Sstr4 (ENSMUSG00000037014) #11 Foxa2 (ENSMUSG00000037025) #12 Pax1 (ENSMUSG00000037034) #13 Nkx2-2 (ENSMUSG00000027434) #14 Nkx2-4 (ENSMUSG00000054160) #15 Xrn2 (ENSMUSG00000027433) #16 Kiz (ENSMUSG00000074749) #17 Ralgapa2 (ENSMUSG00000037110) #19 Insm1 (ENSMUSG00000068154) #20 Cfap61 (ENSMUSG00000037143) #21 Crnkl1 (ENSMUSG00000001767) #22 Naa20 (ENSMUSG00000002728) #23 Rin2 (ENSMUSG00000001768) #24 Slc24a3 (ENSMUSG00000063873) #25 Scp2d1 (ENSMUSG00000027431) #26 Dtd1 (ENSMUSG00000027430) #27 Smim26 (ENSMUSG00000074754) #28 Sec23b (ENSMUSG00000027429) #29 Rbbp9 (ENSMUSG00000027428) #30 Polr3f (ENSMUSG00000027427) #31 Dzank1 (ENSMUSG00000037259) #32 Pet117 (ENSMUSG00000098387) Kat14 (ENSMUSG00000027425) #34 Ovol2 (ENSMUSG00000037279) #35 Mgme1 (ENSMUSG00000027424) #36 Snx5 (ENSMUSG00000027423) #37 Mus_C ANCESTRAL SPECIES ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00970000195442 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931.m #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 ENSGT00940000154632 #37 ENSGT00940000162003 spretus MODERN SPECIES 11 Gzf1 (MGP_SPRETEiJ_G0025327) #7 Nxt1 (MGP_SPRETEiJ_G0025326) #8 Cd93 (MGP_SPRETEiJ_G0025325) #9 Thbd (MGP_SPRETEiJ_G0025324) #10 Sstr4 (MGP_SPRETEiJ_G0025323) #11 Foxa2 (MGP_SPRETEiJ_G0025322) #12 Pax1 (MGP_SPRETEiJ_G0025321) #13 Nkx2-2 (MGP_SPRETEiJ_G0025320) #14 Nkx2-4 (MGP_SPRETEiJ_G0025319) #15 Xrn2 (MGP_SPRETEiJ_G0025318) #16 MGP_SPRETEiJ_G0025317 Kiz (MGP_SPRETEiJ_G0025316) #17 Ralgapa2 (MGP_SPRETEiJ_G0025315) #19 Insm1 (MGP_SPRETEiJ_G0025314) #20 Cfap61 (MGP_SPRETEiJ_G0025313) #21 Crnkl1 (MGP_SPRETEiJ_G0025312) #22 Naa20 (MGP_SPRETEiJ_G0025311) #23 Rin2 (MGP_SPRETEiJ_G0025310) #24 Slc24a3 (MGP_SPRETEiJ_G0025309) #25 Dtd1 (MGP_SPRETEiJ_G0025308) #27 Smim26 (MGP_SPRETEiJ_G0025307) #28 Sec23b (MGP_SPRETEiJ_G0025306) #29 Rbbp9 (MGP_SPRETEiJ_G0025305) #30 Polr3f (MGP_SPRETEiJ_G0025304) #31 Dzank1 (MGP_SPRETEiJ_G0025303) #32 Pet117 (MGP_SPRETEiJ_G0025302) Kat14 (MGP_SPRETEiJ_G0025301) #34 Ovol2 (MGP_SPRETEiJ_G0025300) #35 Mgme1 (MGP_SPRETEiJ_G0025299) #36 Snx5 (MGP_SPRETEiJ_G0025298) #37 Banf2 (MGP_SPRETEiJ_G0025297) Steppe mouse MODERN SPECIES 17 Pax1 (ENSMSIG00000015104) #13 ENSMSIG00000015077 ENSMSIG00000015060 #14 Nkx2-4 (ENSMSIG00000015047) #15 Xrn2 (ENSMSIG00000014908) #16 Kiz (ENSMSIG00000014848) #17 Ralgapa2 (ENSMSIG00000014327) #19 ENSMSIG00000014314 #20 Cfap61 (ENSMSIG00000014190) #21 Crnkl1 (ENSMSIG00000014156) #22 Naa20 (ENSMSIG00000014125) #23 Rin2 (ENSMSIG00000014047) #24 ENSMSIG00000014037 Slc24a3 (ENSMSIG00000013851) #25 ENSMSIG00000013826 Ryukyu mouse MODERN SPECIES 11 Gzf1 (MGP_CAROLIEiJ_G0024409) #7 Nxt1 (MGP_CAROLIEiJ_G0024408) #8 Cd93 (MGP_CAROLIEiJ_G0024407) #9 Thbd (MGP_CAROLIEiJ_G0024406) #10 Sstr4 (MGP_CAROLIEiJ_G0024405) #11 Foxa2 (MGP_CAROLIEiJ_G0024404) #12 Pax1 (MGP_CAROLIEiJ_G0024403) #13 Nkx2-2 (MGP_CAROLIEiJ_G0024402) #14 Nkx2-4 (MGP_CAROLIEiJ_G0024401) #15 Xrn2 (MGP_CAROLIEiJ_G0024400) #16 MGP_CAROLIEiJ_G0024399 Kiz (MGP_CAROLIEiJ_G0024398) #17 Ralgapa2 (MGP_CAROLIEiJ_G0024397) #19 Insm1 (MGP_CAROLIEiJ_G0024396) #20 Cfap61 (MGP_CAROLIEiJ_G0024395) #21 Crnkl1 (MGP_CAROLIEiJ_G0024394) #22 Naa20 (MGP_CAROLIEiJ_G0024393) #23 Rin2 (MGP_CAROLIEiJ_G0024392) #24 MGP_CAROLIEiJ_G0024391 #25 Scp2d1 (MGP_CAROLIEiJ_G0024390) #26 Dtd1 (MGP_CAROLIEiJ_G0024389) #27 Smim26 (MGP_CAROLIEiJ_G0024388) #28 Sec23b (MGP_CAROLIEiJ_G0024387) #29 Rbbp9 (MGP_CAROLIEiJ_G0024386) #30 Polr3f (MGP_CAROLIEiJ_G0024385) #31 Dzank1 (MGP_CAROLIEiJ_G0024384) #32 Pet117 (MGP_CAROLIEiJ_G0024383) Kat14 (MGP_CAROLIEiJ_G0024382) #34 Ovol2 (MGP_CAROLIEiJ_G0024381) #35 Mgme1 (MGP_CAROLIEiJ_G0024380) #36 Snx5 (MGP_CAROLIEiJ_G0024379) #37 Mus_A ANCESTRAL SPECIES ENSGT00550000074931.n #22 Mus_B ANCESTRAL SPECIES ENSGT00550000074931.n #22 Mus_C ANCESTRAL SPECIES ENSGT00550000074931.n #22 Steppe mouse MODERN SPECIES 2085 ENSMSIG00000020182 #22 Cricetidae ANCESTRAL SPECIES 5 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Cricetinae ANCESTRAL SPECIES 1 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 51 ENSCGRG00001001115 #22 ENSCGRG00001000974 #23 ENSCGRG00001000878 #24 ENSCGRG00001000784 #24 ENSCGRG00001000733 #23 ENSCGRG00001000687 #22 Chinese hamster chok1gshd MODERN SPECIES 51 ENSCGRG00001000687 #22 ENSCGRG00001000733 #23 ENSCGRG00001000784 #24 ENSCGRG00001000878 #24 ENSCGRG00001000974 #23 ENSCGRG00001001115 #22 Golden Hamster MODERN SPECIES 650 Gzf1 (ENSMAUG00000019656) #7 Nxt1 (ENSMAUG00000004141) #8 Cd93 (ENSMAUG00000019441) #9 Sstr4 (ENSMAUG00000008430) #11 Foxa2 (ENSMAUG00000016457) #12 Pax1 (ENSMAUG00000019674) #13 Nkx2-2 (ENSMAUG00000004347) #14 Nkx2-4 (ENSMAUG00000013928) #15 Xrn2 (ENSMAUG00000021842) #16 Kiz (ENSMAUG00000012933) #17 Ralgapa2 (ENSMAUG00000000917) #19 Insm1 (ENSMAUG00000008643) #20 Cfap61 (ENSMAUG00000021388) #21 ENSMAUG00000018263 ENSMAUG00000014865 Crnkl1 (ENSMAUG00000020764) #22 Naa20 (ENSMAUG00000016403) #23 Rin2 (ENSMAUG00000010319) #24 Slc24a3 (ENSMAUG00000014182) #25 Scp2d1 (ENSMAUG00000008663) #26 Dtd1 (ENSMAUG00000021240) #27 Smim26 (ENSMAUG00000021093) #28 ENSMAUG00000009451 #29 Rbbp9 (ENSMAUG00000009061) #30 Polr3f (ENSMAUG00000020176) #31 ENSMAUG00000002240 #32 Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Northern American deer mouse MODERN SPECIES 17 Gzf1 (ENSPEMG00000011285) #7 Nxt1 (ENSPEMG00000010397) #8 Cd93 (ENSPEMG00000009909) #9 Thbd (ENSPEMG00000013258) #10 Sstr4 (ENSPEMG00000013404) #11 Foxa2 (ENSPEMG00000018383) #12 ENSPEMG00000013352 Pax1 (ENSPEMG00000013032) #13 Nkx2-2 (ENSPEMG00000031205) #14 Xrn2 (ENSPEMG00000000111) #16 Kiz (ENSPEMG00000019926) #17 ENSPEMG00000018301 Ralgapa2 (ENSPEMG00000015207) #19 Insm1 (ENSPEMG00000011704) #20 Cfap61 (ENSPEMG00000019999) #21 Crnkl1 (ENSPEMG00000000073) #22 Naa20 (ENSPEMG00000019944) #23 Rin2 (ENSPEMG00000007218) #24 Slc24a3 (ENSPEMG00000019985) #25 ENSPEMG00000027872 Scp2d1 (ENSPEMG00000012681) #26 Dtd1 (ENSPEMG00000019439) #27 Smim26 (ENSPEMG00000025969) #28 Sec23b (ENSPEMG00000019699) #29 Rbbp9 (ENSPEMG00000027962) #30 Polr3f (ENSPEMG00000006966) #31 Dzank1 (ENSPEMG00000019969) #32 ENSPEMG00000019835 #33 ENSPEMG00000012956 Kat14 (ENSPEMG00000011685) #34 Pet117 (ENSPEMG00000026500) Prairie vole DUPLICATION Prairie vole MODERN SPECIES 86 Nxt1 (ENSMOCG00000018712) #8 ENSMOCG00000014565 Cd93 (ENSMOCG00000008988) #9 Thbd (ENSMOCG00000004558) #10 Sstr4 (ENSMOCG00000004743) #11 Foxa2 (ENSMOCG00000017025) #12 Pax1 (ENSMOCG00000000474) #13 Nkx2-2 (ENSMOCG00000016851) #14 Nkx2-4 (ENSMOCG00000012451) #15 Xrn2 (ENSMOCG00000012588) #16 Kiz (ENSMOCG00000022509) #17 ENSMOCG00000020632 Ralgapa2 (ENSMOCG00000015663) #19 Insm1 (ENSMOCG00000010418) #20 Cfap61 (ENSMOCG00000001829) #21 ENSMOCG00000000681 #22 ENSMOCG00000021892 #23 Rin2 (ENSMOCG00000011014) #24 Slc24a3 (ENSMOCG00000014059) #25 Scp2d1 (ENSMOCG00000005227) #26 Dtd1 (ENSMOCG00000001062) #27 ENSMOCG00000016611 #28 Sec23b (ENSMOCG00000003908) #29 Rbbp9 (ENSMOCG00000014462) #30 Polr3f (ENSMOCG00000018352) #31 Dzank1 (ENSMOCG00000011252) #32 ENSMOCG00000009849 #33 Kat14 (ENSMOCG00000013699) #34 Pet117 (ENSMOCG00000015322) Ovol2 (ENSMOCG00000019872) #35 Mgme1 (ENSMOCG00000022927) #36 Prairie vole MODERN SPECIES Mark3 (ENSMOCG00000018347) ENSMOCG00000021790 Tnfaip2 (ENSMOCG00000011420) Exoc3l4 (ENSMOCG00000004296) Lbhd2 (ENSMOCG00000018196) Cdc42bpb (ENSMOCG00000021696) ENSMOCG00000017882 Amn (ENSMOCG00000001893) Traf3 (ENSMOCG00000017772) Rcor1 (ENSMOCG00000012999) Ankrd9 (ENSMOCG00000002881) Tecpr2 (ENSMOCG00000000369) Cinp (ENSMOCG00000019159) Mok (ENSMOCG00000016493) ENSMOCG00000018133 ENSMOCG00000004179 #22 1700001K19Rik (ENSMOCG00000001086) Dync1h1 (ENSMOCG00000014093) Ppp2r5c (ENSMOCG00000010635) ENSMOCG00000014215 ENSMOCG00000012506 Dlk1 (ENSMOCG00000004545) ENSMOCG00000015016 Begain (ENSMOCG00000019702) Wdr25 (ENSMOCG00000013904) Wars1 (ENSMOCG00000021997) Slc25a47 (ENSMOCG00000005653) Slc25a29 (ENSMOCG00000021563) Yy1 (ENSMOCG00000014983) Degs2 (ENSMOCG00000012466) Evl (ENSMOCG00000018090) Upper Galilee mountains blind mole rat MODERN SPECIES 450 Pax1 (ENSNGAG00000011690) #13 Nkx2-2 (ENSNGAG00000015181) #14 Nkx2-4 (ENSNGAG00000009374) #15 Xrn2 (ENSNGAG00000018138) #16 Kiz (ENSNGAG00000013505) #17 ENSNGAG00000015751 #19 ENSNGAG00000011107 #19 Insm1 (ENSNGAG00000020652) #20 Cfap61 (ENSNGAG00000020907) #21 Crnkl1 (ENSNGAG00000023097) #22 Naa20 (ENSNGAG00000014784) #23 Rin2 (ENSNGAG00000009777) #24 Slc24a3 (ENSNGAG00000011154) #25 Lesser Egyptian jerboa MODERN SPECIES 159 Gzf1 (ENSJJAG00000008172) #7 ENSJJAG00000012022 #8 Cd93 (ENSJJAG00000007591) #9 Sstr4 (ENSJJAG00000023336) #11 Foxa2 (ENSJJAG00000023228) #12 Pax1 (ENSJJAG00000023177) #13 Nkx2-2 (ENSJJAG00000022426) #14 Nkx2-4 (ENSJJAG00000022335) #15 Xrn2 (ENSJJAG00000022128) #16 Kiz (ENSJJAG00000021546) #17 ENSJJAG00000020834 ENSJJAG00000020710 #19 ENSJJAG00000020467 #19 Insm1 (ENSJJAG00000020276) #20 Cfap61 (ENSJJAG00000018922) #21 Crnkl1 (ENSJJAG00000016926) #22 Naa20 (ENSJJAG00000016004) #23 ENSJJAG00000015745 #24 Slc24a3 (ENSJJAG00000015385) #25 Dtd1 (ENSJJAG00000014379) #27 Sec23b (ENSJJAG00000018722) #29 Rbbp9 (ENSJJAG00000017816) #30 Polr3f (ENSJJAG00000017513) #31 Dzank1 (ENSJJAG00000016670) #32 ENSJJAG00000015853 Kat14 (ENSJJAG00000015569) #34 Ovol2 (ENSJJAG00000014942) #35 Mgme1 (ENSJJAG00000014663) #36 ENSJJAG00000014561 #37 ENSJJAG00000014376 Banf2 (ENSJJAG00000014091) Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 564 Alox5 (ENSDORG00000003390) ENSDORG00000025176 ENSDORG00000009791 ENSDORG00000030059 ENSDORG00000024941 Ncoa4 (ENSDORG00000004934) Timm23 (ENSDORG00000027219) Parg (ENSDORG00000004206) ENSDORG00000028855 Ogdhl (ENSDORG00000003535) 1700024G13Rik (ENSDORG00000025082) Chat (ENSDORG00000003024) Slc18a3 (ENSDORG00000003021) ENSDORG00000023724 #22 Kangaroo rat MODERN SPECIES 353 ENSDORG00000028507 Tysnd1 (ENSDORG00000016309) ENSDORG00000023465 Ppa1 (ENSDORG00000006412) Npffr1 (ENSDORG00000006413) Lrrc20 (ENSDORG00000015982) Eif4ebp2 (ENSDORG00000025031) Nodal (ENSDORG00000011307) Pald1 (ENSDORG00000009740) Prf1 (ENSDORG00000009746) Adamts14 (ENSDORG00000002917) Tbata (ENSDORG00000012998) Sgpl1 (ENSDORG00000015465) Pcbd1 (ENSDORG00000002332) ENSDORG00000014215 ENSDORG00000030174 #22 ENSDORG00000028847 Kangaroo rat MODERN SPECIES 418 Gzf1 (ENSDORG00000011855) #7 Nxt1 (ENSDORG00000024690) #8 Cd93 (ENSDORG00000028704) #9 Sstr4 (ENSDORG00000010486) #11 Foxa2 (ENSDORG00000027269) #12 Pax1 (ENSDORG00000016051) #13 Nkx2-2 (ENSDORG00000007972) #14 Nkx2-4 (ENSDORG00000023542) #15 Xrn2 (ENSDORG00000005434) #16 ENSDORG00000024554 #19 ENSDORG00000025962 #19 Insm1 (ENSDORG00000009864) #20 ENSDORG00000000395 ENSDORG00000029623 #21 ENSDORG00000024717 #21 ENSDORG00000000394 #22 Naa20 (ENSDORG00000028339) #23 Rin2 (ENSDORG00000000392) #24 Slc24a3 (ENSDORG00000008187) #25 Scp2d1 (ENSDORG00000002960) #26 Dtd1 (ENSDORG00000006940) #27 Sec23b (ENSDORG00000014203) #29 Polr3f (ENSDORG00000016352) #31 Dzank1 (ENSDORG00000016349) #32 ENSDORG00000009747 #33 Kat14 (ENSDORG00000013195) #34 Pet117 (ENSDORG00000027184) Ovol2 (ENSDORG00000016697) #35 Mgme1 (ENSDORG00000016696) #36 Snx5 (ENSDORG00000012817) #37 Banf2 (ENSDORG00000008561) Rodentia_A ANCESTRAL SPECIES 17 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Sciuridae ANCESTRAL SPECIES 13 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Marmotini ANCESTRAL SPECIES 5 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00390000007696.e.a.a.a ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Marmotini_b ANCESTRAL SPECIES 18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00860000134050 #28 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 Squirrel MODERN SPECIES 85 INSM1 (ENSSTOG00000022353) #20 CFAP61 (ENSSTOG00000014765) #21 CRNKL1 (ENSSTOG00000014747) #22 NAA20 (ENSSTOG00000014733) #23 RIN2 (ENSSTOG00000014712) #24 SLC24A3 (ENSSTOG00000009809) #25 DTD1 (ENSSTOG00000016282) #27 SMIM26 (ENSSTOG00000033106) #28 SEC23B (ENSSTOG00000025438) #29 RBBP9 (ENSSTOG00000000821) #30 POLR3F (ENSSTOG00000013588) #31 DZANK1 (ENSSTOG00000013579) #32 ZNF133 (ENSSTOG00000013576) #33 KAT14 (ENSSTOG00000010238) #34 PET117 (ENSSTOG00000026528) OVOL2 (ENSSTOG00000024979) #35 MGME1 (ENSSTOG00000019941) #36 SNX5 (ENSSTOG00000015416) #37 Arctic ground squirrel MODERN SPECIES 233 RALGAPA2 (ENSUPAG00010004307) #19 INSM1 (ENSUPAG00010004284) #20 ENSUPAG00010004279 ENSUPAG00010004266 #21 ENSUPAG00010004164 #21 CRNKL1 (ENSUPAG00010004128) #22 NAA20 (ENSUPAG00010004110) #23 RIN2 (ENSUPAG00010004049) #24 SLC24A3 (ENSUPAG00010004015) #25 SCP2D1 (ENSUPAG00010004009) #26 DTD1 (ENSUPAG00010004007) #27 SMIM26 (ENSUPAG00010004005) #28 SEC23B (ENSUPAG00010003976) #29 RBBP9 (ENSUPAG00010003965) #30 POLR3F (ENSUPAG00010003952) #31 DZANK1 (ENSUPAG00010003927) #32 ZNF133 (ENSUPAG00010003916) #33 ENSUPAG00010003905 KAT14 (ENSUPAG00010003862) #34 OVOL2 (ENSUPAG00010003853) #35 MGME1 (ENSUPAG00010003848) #36 Alpin marmot MODERN SPECIES NXT1 (ENSMMMG00000004405) #8 ENSMMMG00000004398 CD93 (ENSMMMG00000004395) #9 THBD (ENSMMMG00000004391) #10 SSTR4 (ENSMMMG00000004385) #11 FOXA2 (ENSMMMG00000004350) #12 PAX1 (ENSMMMG00000004326) #13 NKX2-2 (ENSMMMG00000004284) #14 XRN2 (ENSMMMG00000004161) #16 KIZ (ENSMMMG00000003881) #17 ENSMMMG00000003871 RALGAPA2 (ENSMMMG00000003453) #19 ENSMMMG00000003417 ENSMMMG00000003408 #21 ENSMMMG00000003290 #21 CRNKL1 (ENSMMMG00000003244) #22 NAA20 (ENSMMMG00000003240) #23 RIN2 (ENSMMMG00000003172) #24 SLC24A3 (ENSMMMG00000003105) #25 SCP2D1 (ENSMMMG00000003079) #26 ENSMMMG00000003073 DTD1 (ENSMMMG00000003060) #27 SMIM26 (ENSMMMG00000003045) #28 SEC23B (ENSMMMG00000003024) #29 RBBP9 (ENSMMMG00000003013) #30 POLR3F (ENSMMMG00000002996) #31 DZANK1 (ENSMMMG00000002954) #32 ZNF133 (ENSMMMG00000002935) #33 KAT14 (ENSMMMG00000002887) #34 OVOL2 (ENSMMMG00000002853) #35 MGME1 (ENSMMMG00000002827) #36 Eurasian red squirrel MODERN SPECIES 11 THBD (ENSSVLG00005000349) #10 SSTR4 (ENSSVLG00005000359) #11 ENSSVLG00005000368 FOXA2 (ENSSVLG00005000389) #12 ENSSVLG00005000403 PAX1 (ENSSVLG00005000421) #13 NKX2-2 (ENSSVLG00005000441) #14 NKX2-4 (ENSSVLG00005000455) #15 XRN2 (ENSSVLG00005000470) #16 KIZ (ENSSVLG00005000513) #17 ENSSVLG00005000546 RALGAPA2 (ENSSVLG00005000611) #19 INSM1 (ENSSVLG00005000689) #20 CFAP61 (ENSSVLG00005000731) #21 ENSSVLG00005000777 CRNKL1 (ENSSVLG00005000792) #22 NAA20 (ENSSVLG00005000837) #23 RIN2 (ENSSVLG00005000879) #24 SLC24A3 (ENSSVLG00005000927) #25 SCP2D1 (ENSSVLG00005000950) #26 DTD1 (ENSSVLG00005000962) #27 ENSSVLG00005000978 SMIM26 (ENSSVLG00005000999) #28 SEC23B (ENSSVLG00005001018) #29 RBBP9 (ENSSVLG00005001054) #30 POLR3F (ENSSVLG00005001072) #31 DZANK1 (ENSSVLG00005001106) #32 ZNF133 (ENSSVLG00005001176) #33 KAT14 (ENSSVLG00005001213) #34 OVOL2 (ENSSVLG00005001229) #35 ENSSVLG00005001249 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987.n.a #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #27 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 ENSGT00940000154632 #37 ENSGT00940000162003 Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987.n.a #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #27 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 ENSGT00940000154632 #37 ENSGT00940000162003 Hystricomorpha_b ANCESTRAL SPECIES 31 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987.n.a #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #27 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 ENSGT00940000154632 #37 ENSGT00940000162003 Long-tailed chinchilla MODERN SPECIES 122 ENSCLAG00000015474 ENSCLAG00000011384 CSTL1 (ENSCLAG00000012446) NAPB (ENSCLAG00000011540) GZF1 (ENSCLAG00000014714) #7 NXT1 (ENSCLAG00000012493) #8 CD93 (ENSCLAG00000012062) #9 THBD (ENSCLAG00000011994) #10 FOXA2 (ENSCLAG00000014548) #12 PAX1 (ENSCLAG00000016362) #13 NKX2-2 (ENSCLAG00000016430) #14 XRN2 (ENSCLAG00000013419) #16 KIZ (ENSCLAG00000012565) #17 RALGAPA2 (ENSCLAG00000012502) #19 CFAP61 (ENSCLAG00000014155) #21 CRNKL1 (ENSCLAG00000013859) #22 NAA20 (ENSCLAG00000014313) #23 RIN2 (ENSCLAG00000015234) #24 SLC24A3 (ENSCLAG00000015547) #25 DTD1 (ENSCLAG00000015302) #27 SEC23B (ENSCLAG00000014924) #29 RBBP9 (ENSCLAG00000014851) #30 POLR3F (ENSCLAG00000016296) #31 DZANK1 (ENSCLAG00000013160) #32 ZNF133 (ENSCLAG00000015115) #33 KAT14 (ENSCLAG00000012590) #34 PET117 (ENSCLAG00000015171) OVOL2 (ENSCLAG00000015694) #35 MGME1 (ENSCLAG00000011196) #36 SNX5 (ENSCLAG00000010784) #37 BANF2 (ENSCLAG00000010547) Degu MODERN SPECIES 114 FOXA2 (ENSODEG00000011162) #12 PAX1 (ENSODEG00000012427) #13 ENSODEG00000019878 ENSODEG00000019885 NKX2-2 (ENSODEG00000012371) #14 ENSODEG00000012687 NKX2-4 (ENSODEG00000010842) #15 ENSODEG00000010745 #16 ENSODEG00000011188 KIZ (ENSODEG00000011491) #17 RALGAPA2 (ENSODEG00000011023) #19 INSM1 (ENSODEG00000020028) #20 ENSODEG00000011346 ENSODEG00000012124 #21 ENSODEG00000012675 #21 CRNKL1 (ENSODEG00000012175) #22 NAA20 (ENSODEG00000011704) #23 RIN2 (ENSODEG00000012000) #24 SLC24A3 (ENSODEG00000012016) #25 DTD1 (ENSODEG00000012785) #27 SEC23B (ENSODEG00000011313) #29 RBBP9 (ENSODEG00000011960) #30 POLR3F (ENSODEG00000011521) #31 DZANK1 (ENSODEG00000011655) #32 KAT14 (ENSODEG00000013036) #34 ENSODEG00000012384 PET117 (ENSODEG00000011978) OVOL2 (ENSODEG00000011424) #35 MGME1 (ENSODEG00000011889) #36 ENSODEG00000012412 #37 BANF2 (ENSODEG00000011931) Guinea pig MODERN SPECIES 8 CSTL1 (ENSCPOG00000008734) NAPB (ENSCPOG00000039063) GZF1 (ENSCPOG00000010790) #7 NXT1 (ENSCPOG00000008817) #8 CD93 (ENSCPOG00000010252) #9 THBD (ENSCPOG00000030575) #10 FOXA2 (ENSCPOG00000033370) #12 PAX1 (ENSCPOG00000002886) #13 NKX2-2 (ENSCPOG00000000408) #14 XRN2 (ENSCPOG00000009407) #16 KIZ (ENSCPOG00000005683) #17 RALGAPA2 (ENSCPOG00000001602) #19 ENSCPOG00000038064 ENSCPOG00000039658 #21 ENSCPOG00000001594 #21 CRNKL1 (ENSCPOG00000004418) #22 NAA20 (ENSCPOG00000001593) #23 RIN2 (ENSCPOG00000013179) #24 SLC24A3 (ENSCPOG00000011970) #25 DTD1 (ENSCPOG00000002416) #27 SEC23B (ENSCPOG00000002406) #29 RBBP9 (ENSCPOG00000036556) #30 POLR3F (ENSCPOG00000002400) #31 DZANK1 (ENSCPOG00000002397) #32 ZNF133 (ENSCPOG00000030599) #33 KAT14 (ENSCPOG00000013124) #34 PET117 (ENSCPOG00000031383) OVOL2 (ENSCPOG00000039633) #35 MGME1 (ENSCPOG00000036436) #36 SNX5 (ENSCPOG00000007908) #37 BANF2 (ENSCPOG00000000915) Lagomorpha ANCESTRAL SPECIES 57 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.B ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00670000098098 #16 ENSGT00390000010121 #17 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b #26 ENSGT00940000153431.b #27 ENSGT00390000006916.c #29 ENSGT00390000014861 #30 ENSGT00390000009679 #31 ENSGT00390000000549 #32 ENSGT00940000162260 #33 ENSGT00390000001146 #34 ENSGT00520000059926 ENSGT00940000159359 #35 ENSGT00390000003349 #36 ENSGT00940000154632 #37 Pika MODERN SPECIES 1171 ENSOPRG00000009297 #24 ENSOPRG00000009242 #22 Rabbit MODERN SPECIES 15 CSTL1 (ENSOCUG00000024430) ENSOCUG00000025538 NAPB (ENSOCUG00000009263) ENSOCUG00000025214 #7 NXT1 (ENSOCUG00000025924) #8 ENSOCUG00000024138 CD93 (ENSOCUG00000014812) #9 FOXA2 (ENSOCUG00000007368) #12 PAX1 (ENSOCUG00000003276) #13 NKX2-2 (ENSOCUG00000007166) #14 ENSOCUG00000024195 XRN2 (ENSOCUG00000013468) #16 KIZ (ENSOCUG00000013848) #17 RALGAPA2 (ENSOCUG00000017951) #19 CFAP61 (ENSOCUG00000015506) #21 CRNKL1 (ENSOCUG00000015484) #22 NAA20 (ENSOCUG00000015481) #23 RIN2 (ENSOCUG00000015450) #24 SLC24A3 (ENSOCUG00000009833) #25 ENSOCUG00000035674 SCP2D1 (ENSOCUG00000010991) #26 DTD1 (ENSOCUG00000010988) #27 ENSOCUG00000037347 SEC23B (ENSOCUG00000015079) #29 ENSOCUG00000027382 RBBP9 (ENSOCUG00000015074) #30 POLR3F (ENSOCUG00000015067) #31 DZANK1 (ENSOCUG00000015055) #32 ZNF133 (ENSOCUG00000014537) #33 KAT14 (ENSOCUG00000015365) #34 PET117 (ENSOCUG00000037055)