Chordata ANCESTRAL SPECIES ENSGT00550000074931 #22 Vertebrata ANCESTRAL SPECIES ENSGT00550000074931 #22 Gnathostomata ANCESTRAL SPECIES 109 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00950000183147.B ENSGT00940000154755 Euteleostomi ANCESTRAL SPECIES 226 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 Sarcopterygii ANCESTRAL SPECIES 122 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00940000163377.b ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00520000059926 #32 ENSGT00390000001146 #33 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Tetrapoda ANCESTRAL SPECIES 49 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00940000163377.b ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00520000059926 #32 ENSGT00390000001146 #33 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Amniota ANCESTRAL SPECIES 12 ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 ENSGT00940000162003 #37 Mammalia ANCESTRAL SPECIES 22 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Theria ANCESTRAL SPECIES 13 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Eutheria ANCESTRAL SPECIES 11 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Boreoeutheria ANCESTRAL SPECIES 17 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Glires ANCESTRAL SPECIES 17 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Rodentia ANCESTRAL SPECIES 18 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Rodentia_B ANCESTRAL SPECIES 13 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Myomorpha ANCESTRAL SPECIES 9 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Muroidea ANCESTRAL SPECIES 7 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Murinae ANCESTRAL SPECIES 1 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Mus ANCESTRAL SPECIES 1 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Mus_A DUPLICATION Mus_A ANCESTRAL SPECIES ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00970000195442 #17 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931.m #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Mus_B ANCESTRAL SPECIES 1 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00970000195442 #17 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931.m #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Mus_C ANCESTRAL SPECIES ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00970000195442 #17 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931.m #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 ENSGT00940000162003 #37 spretus MODERN SPECIES 11 Gzf1 (MGP_SPRETEiJ_G0025327) #7 Nxt1 (MGP_SPRETEiJ_G0025326) #8 Cd93 (MGP_SPRETEiJ_G0025325) #9 Thbd (MGP_SPRETEiJ_G0025324) #10 Sstr4 (MGP_SPRETEiJ_G0025323) #11 Foxa2 (MGP_SPRETEiJ_G0025322) #12 Pax1 (MGP_SPRETEiJ_G0025321) #13 Nkx2-2 (MGP_SPRETEiJ_G0025320) #14 Nkx2-4 (MGP_SPRETEiJ_G0025319) #15 Xrn2 (MGP_SPRETEiJ_G0025318) #16 MGP_SPRETEiJ_G0025317 #17 Kiz (MGP_SPRETEiJ_G0025316) #18 Ralgapa2 (MGP_SPRETEiJ_G0025315) #19 Insm1 (MGP_SPRETEiJ_G0025314) #20 Cfap61 (MGP_SPRETEiJ_G0025313) #21 Crnkl1 (MGP_SPRETEiJ_G0025312) #22 Naa20 (MGP_SPRETEiJ_G0025311) #23 Rin2 (MGP_SPRETEiJ_G0025310) #24 Slc24a3 (MGP_SPRETEiJ_G0025309) #25 Dtd1 (MGP_SPRETEiJ_G0025308) #26 Smim26 (MGP_SPRETEiJ_G0025307) #27 Sec23b (MGP_SPRETEiJ_G0025306) #28 Rbbp9 (MGP_SPRETEiJ_G0025305) #29 Polr3f (MGP_SPRETEiJ_G0025304) #30 Dzank1 (MGP_SPRETEiJ_G0025303) #31 Pet117 (MGP_SPRETEiJ_G0025302) #32 Kat14 (MGP_SPRETEiJ_G0025301) #33 Ovol2 (MGP_SPRETEiJ_G0025300) #34 Mgme1 (MGP_SPRETEiJ_G0025299) #35 Snx5 (MGP_SPRETEiJ_G0025298) #36 Banf2 (MGP_SPRETEiJ_G0025297) #37 Steppe mouse MODERN SPECIES 17 Pax1 (ENSMSIG00000015104) #13 ENSMSIG00000015077 ENSMSIG00000015060 #14 Nkx2-4 (ENSMSIG00000015047) #15 Xrn2 (ENSMSIG00000014908) #16 Kiz (ENSMSIG00000014848) #18 Ralgapa2 (ENSMSIG00000014327) #19 ENSMSIG00000014314 #20 Cfap61 (ENSMSIG00000014190) #21 Crnkl1 (ENSMSIG00000014156) #22 Naa20 (ENSMSIG00000014125) #23 Rin2 (ENSMSIG00000014047) #24 ENSMSIG00000014037 Slc24a3 (ENSMSIG00000013851) #25 ENSMSIG00000013826 Mouse MODERN SPECIES 11 Napb (ENSMUSG00000027438) Gzf1 (ENSMUSG00000027439) #7 Nxt1 (ENSMUSG00000036992) #8 Cd93 (ENSMUSG00000027435) #9 Thbd (ENSMUSG00000074743) #10 Sstr4 (ENSMUSG00000037014) #11 Foxa2 (ENSMUSG00000037025) #12 Pax1 (ENSMUSG00000037034) #13 Nkx2-2 (ENSMUSG00000027434) #14 Nkx2-4 (ENSMUSG00000054160) #15 Xrn2 (ENSMUSG00000027433) #16 Kiz (ENSMUSG00000074749) #18 Ralgapa2 (ENSMUSG00000037110) #19 Insm1 (ENSMUSG00000068154) #20 Cfap61 (ENSMUSG00000037143) #21 Crnkl1 (ENSMUSG00000001767) #22 Naa20 (ENSMUSG00000002728) #23 Rin2 (ENSMUSG00000001768) #24 Slc24a3 (ENSMUSG00000063873) #25 Scp2d1 (ENSMUSG00000027431) Dtd1 (ENSMUSG00000027430) #26 Smim26 (ENSMUSG00000074754) #27 Sec23b (ENSMUSG00000027429) #28 Rbbp9 (ENSMUSG00000027428) #29 Polr3f (ENSMUSG00000027427) #30 Dzank1 (ENSMUSG00000037259) #31 Pet117 (ENSMUSG00000098387) #32 Kat14 (ENSMUSG00000027425) #33 Ovol2 (ENSMUSG00000037279) #34 Mgme1 (ENSMUSG00000027424) #35 Snx5 (ENSMUSG00000027423) #36 Ryukyu mouse MODERN SPECIES 11 Gzf1 (MGP_CAROLIEiJ_G0024409) #7 Nxt1 (MGP_CAROLIEiJ_G0024408) #8 Cd93 (MGP_CAROLIEiJ_G0024407) #9 Thbd (MGP_CAROLIEiJ_G0024406) #10 Sstr4 (MGP_CAROLIEiJ_G0024405) #11 Foxa2 (MGP_CAROLIEiJ_G0024404) #12 Pax1 (MGP_CAROLIEiJ_G0024403) #13 Nkx2-2 (MGP_CAROLIEiJ_G0024402) #14 Nkx2-4 (MGP_CAROLIEiJ_G0024401) #15 Xrn2 (MGP_CAROLIEiJ_G0024400) #16 MGP_CAROLIEiJ_G0024399 #17 Kiz (MGP_CAROLIEiJ_G0024398) #18 Ralgapa2 (MGP_CAROLIEiJ_G0024397) #19 Insm1 (MGP_CAROLIEiJ_G0024396) #20 Cfap61 (MGP_CAROLIEiJ_G0024395) #21 Crnkl1 (MGP_CAROLIEiJ_G0024394) #22 Naa20 (MGP_CAROLIEiJ_G0024393) #23 Rin2 (MGP_CAROLIEiJ_G0024392) #24 MGP_CAROLIEiJ_G0024391 #25 Scp2d1 (MGP_CAROLIEiJ_G0024390) Dtd1 (MGP_CAROLIEiJ_G0024389) #26 Smim26 (MGP_CAROLIEiJ_G0024388) #27 Sec23b (MGP_CAROLIEiJ_G0024387) #28 Rbbp9 (MGP_CAROLIEiJ_G0024386) #29 Polr3f (MGP_CAROLIEiJ_G0024385) #30 Dzank1 (MGP_CAROLIEiJ_G0024384) #31 Pet117 (MGP_CAROLIEiJ_G0024383) #32 Kat14 (MGP_CAROLIEiJ_G0024382) #33 Ovol2 (MGP_CAROLIEiJ_G0024381) #34 Mgme1 (MGP_CAROLIEiJ_G0024380) #35 Snx5 (MGP_CAROLIEiJ_G0024379) #36 Mus_A ANCESTRAL SPECIES ENSGT00550000074931.n ##22 Mus_B ANCESTRAL SPECIES ENSGT00550000074931.n ##22 Mus_C ANCESTRAL SPECIES ENSGT00550000074931.n ##22 Steppe mouse MODERN SPECIES 2085 ENSMSIG00000020182 ##22 Shrew mouse MODERN SPECIES 16 Napb (MGP_PahariEiJ_G0025853) Gzf1 (MGP_PahariEiJ_G0025852) #7 Nxt1 (MGP_PahariEiJ_G0025851) #8 Cd93 (MGP_PahariEiJ_G0025850) #9 Thbd (MGP_PahariEiJ_G0025849) #10 Sstr4 (MGP_PahariEiJ_G0025848) #11 Foxa2 (MGP_PahariEiJ_G0025847) #12 Pax1 (MGP_PahariEiJ_G0025846) #13 Nkx2-2 (MGP_PahariEiJ_G0025845) #14 Nkx2-4 (MGP_PahariEiJ_G0025844) #15 Xrn2 (MGP_PahariEiJ_G0025843) #16 Kiz (MGP_PahariEiJ_G0025842) #18 Ralgapa2 (MGP_PahariEiJ_G0025841) #19 Insm1 (MGP_PahariEiJ_G0025840) #20 Cfap61 (MGP_PahariEiJ_G0025839) #21 Crnkl1 (MGP_PahariEiJ_G0025838) #22 Naa20 (MGP_PahariEiJ_G0025837) #23 Rin2 (MGP_PahariEiJ_G0025836) #24 MGP_PahariEiJ_G0025835 #25 Scp2d1 (MGP_PahariEiJ_G0025834) Dtd1 (MGP_PahariEiJ_G0025833) #26 Smim26 (MGP_PahariEiJ_G0025832) #27 Sec23b (MGP_PahariEiJ_G0025831) #28 Rbbp9 (MGP_PahariEiJ_G0025830) #29 Polr3f (MGP_PahariEiJ_G0025829) #30 Dzank1 (MGP_PahariEiJ_G0025828) #31 Pet117 (MGP_PahariEiJ_G0025827) #32 Kat14 (MGP_PahariEiJ_G0025826) #33 Ovol2 (MGP_PahariEiJ_G0025825) #34 Mgme1 (MGP_PahariEiJ_G0025824) #35 Snx5 (MGP_PahariEiJ_G0025823) #36 Rat DUPLICATION Rat MODERN SPECIES 16 AABR07064590.1 (ENSRNOG00000050408) Cwf19l2 (ENSRNOG00000024372) Alkbh8 (ENSRNOG00000024525) Mtm1 (ENSRNOG00000002516) AABR07063126.1 (ENSRNOG00000002495) Crnkl1-ps1 (ENSRNOG00000040045) #22 ENSRNOG00000067942 AABR07063082.1 (ENSRNOG00000031342) Nrxn1 (ENSRNOG00000050220) ENSRNOG00000069544 ENSRNOG00000070393 ENSRNOG00000070800 Fshr (ENSRNOG00000016783) Lhcgr (ENSRNOG00000016712) Gtf2a1l (ENSRNOG00000016703) Ston1 (ENSRNOG00000016688) Ppp1r21 (ENSRNOG00000016528) Foxn2 (ENSRNOG00000040110) H2az1-ps2 (ENSRNOG00000031564) Fbxo11 (ENSRNOG00000016396) Msh6 (ENSRNOG00000016134) Rat MODERN SPECIES 13 Gzf1 (ENSRNOG00000004735) #7 Nxt1 (ENSRNOG00000004700) #8 Cd93 (ENSRNOG00000024799) #9 Thbd (ENSRNOG00000004687) #10 Sstr4 (ENSRNOG00000004641) #11 Foxa2 (ENSRNOG00000013133) #12 Pax1 (ENSRNOG00000024882) #13 Nkx2-2 (ENSRNOG00000012728) #14 Nkx2-4 (ENSRNOG00000012647) #15 Xrn2 (ENSRNOG00000011785) #16 Kiz (ENSRNOG00000025141) #18 ENSRNOG00000070752 Ralgapa2 (ENSRNOG00000036964) #19 Insm1 (ENSRNOG00000068937) #20 AABR07054096.1 (ENSRNOG00000011028) #21 Crnkl1 (ENSRNOG00000010587) #22 Naa20 (ENSRNOG00000010523) #23 Rin2 (ENSRNOG00000010131) #24 Slc24a3 (ENSRNOG00000060687) #25 Scp2d1 (ENSRNOG00000009461) Dtd1 (ENSRNOG00000008746) #26 Smim26 (ENSRNOG00000036971) #27 Sec23b (ENSRNOG00000008411) #28 Rbbp9 (ENSRNOG00000007972) #29 Polr3f (ENSRNOG00000007548) #30 Dzank1 (ENSRNOG00000007440) #31 Zfp133 (ENSRNOG00000027955) Kat14 (ENSRNOG00000007160) #33 Ovol2 (ENSRNOG00000006850) #34 Mgme1 (ENSRNOG00000028196) #35 Snx5 (ENSRNOG00000006077) #36 Cricetidae ANCESTRAL SPECIES 5 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Cricetinae ANCESTRAL SPECIES 1 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 51 ENSCGRG00001001115 #22 ENSCGRG00001000974 #23 ENSCGRG00001000878 #24 ENSCGRG00001000784 #24 ENSCGRG00001000733 #23 ENSCGRG00001000687 #22 Chinese hamster chok1gshd MODERN SPECIES 51 ENSCGRG00001000687 #22 ENSCGRG00001000733 #23 ENSCGRG00001000784 #24 ENSCGRG00001000878 #24 ENSCGRG00001000974 #23 ENSCGRG00001001115 #22 Golden Hamster MODERN SPECIES 650 Gzf1 (ENSMAUG00000019656) #7 Nxt1 (ENSMAUG00000004141) #8 Cd93 (ENSMAUG00000019441) #9 Sstr4 (ENSMAUG00000008430) #11 Foxa2 (ENSMAUG00000016457) #12 Pax1 (ENSMAUG00000019674) #13 Nkx2-2 (ENSMAUG00000004347) #14 Nkx2-4 (ENSMAUG00000013928) #15 Xrn2 (ENSMAUG00000021842) #16 Kiz (ENSMAUG00000012933) #18 Ralgapa2 (ENSMAUG00000000917) #19 Insm1 (ENSMAUG00000008643) #20 Cfap61 (ENSMAUG00000021388) #21 ENSMAUG00000018263 ENSMAUG00000014865 Crnkl1 (ENSMAUG00000020764) #22 Naa20 (ENSMAUG00000016403) #23 Rin2 (ENSMAUG00000010319) #24 Slc24a3 (ENSMAUG00000014182) #25 Scp2d1 (ENSMAUG00000008663) Dtd1 (ENSMAUG00000021240) #26 Smim26 (ENSMAUG00000021093) #27 ENSMAUG00000009451 #28 Rbbp9 (ENSMAUG00000009061) #29 Polr3f (ENSMAUG00000020176) #30 ENSMAUG00000002240 #31 Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Northern American deer mouse MODERN SPECIES 17 Gzf1 (ENSPEMG00000011285) #7 Nxt1 (ENSPEMG00000010397) #8 Cd93 (ENSPEMG00000009909) #9 Thbd (ENSPEMG00000013258) #10 Sstr4 (ENSPEMG00000013404) #11 Foxa2 (ENSPEMG00000018383) #12 ENSPEMG00000013352 Pax1 (ENSPEMG00000013032) #13 Nkx2-2 (ENSPEMG00000031205) #14 Xrn2 (ENSPEMG00000000111) #16 Kiz (ENSPEMG00000019926) #18 ENSPEMG00000018301 Ralgapa2 (ENSPEMG00000015207) #19 Insm1 (ENSPEMG00000011704) #20 Cfap61 (ENSPEMG00000019999) #21 Crnkl1 (ENSPEMG00000000073) #22 Naa20 (ENSPEMG00000019944) #23 Rin2 (ENSPEMG00000007218) #24 Slc24a3 (ENSPEMG00000019985) #25 ENSPEMG00000027872 Scp2d1 (ENSPEMG00000012681) Dtd1 (ENSPEMG00000019439) #26 Smim26 (ENSPEMG00000025969) #27 Sec23b (ENSPEMG00000019699) #28 Rbbp9 (ENSPEMG00000027962) #29 Polr3f (ENSPEMG00000006966) #30 Dzank1 (ENSPEMG00000019969) #31 ENSPEMG00000019835 ENSPEMG00000012956 Kat14 (ENSPEMG00000011685) #33 Pet117 (ENSPEMG00000026500) #32 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 86 Nxt1 (ENSMOCG00000018712) #8 ENSMOCG00000014565 Cd93 (ENSMOCG00000008988) #9 Thbd (ENSMOCG00000004558) #10 Sstr4 (ENSMOCG00000004743) #11 Foxa2 (ENSMOCG00000017025) #12 Pax1 (ENSMOCG00000000474) #13 Nkx2-2 (ENSMOCG00000016851) #14 Nkx2-4 (ENSMOCG00000012451) #15 Xrn2 (ENSMOCG00000012588) #16 Kiz (ENSMOCG00000022509) #18 ENSMOCG00000020632 Ralgapa2 (ENSMOCG00000015663) #19 Insm1 (ENSMOCG00000010418) #20 Cfap61 (ENSMOCG00000001829) #21 ENSMOCG00000000681 #22 ENSMOCG00000021892 #23 Rin2 (ENSMOCG00000011014) #24 Slc24a3 (ENSMOCG00000014059) #25 Scp2d1 (ENSMOCG00000005227) Dtd1 (ENSMOCG00000001062) #26 ENSMOCG00000016611 #27 Sec23b (ENSMOCG00000003908) #28 Rbbp9 (ENSMOCG00000014462) #29 Polr3f (ENSMOCG00000018352) #30 Dzank1 (ENSMOCG00000011252) #31 ENSMOCG00000009849 Kat14 (ENSMOCG00000013699) #33 Pet117 (ENSMOCG00000015322) #32 Ovol2 (ENSMOCG00000019872) #34 Mgme1 (ENSMOCG00000022927) #35 Prairie vole MODERN SPECIES Mark3 (ENSMOCG00000018347) ENSMOCG00000021790 Tnfaip2 (ENSMOCG00000011420) Exoc3l4 (ENSMOCG00000004296) Lbhd2 (ENSMOCG00000018196) Cdc42bpb (ENSMOCG00000021696) ENSMOCG00000017882 Amn (ENSMOCG00000001893) Traf3 (ENSMOCG00000017772) Rcor1 (ENSMOCG00000012999) Ankrd9 (ENSMOCG00000002881) Tecpr2 (ENSMOCG00000000369) Cinp (ENSMOCG00000019159) Mok (ENSMOCG00000016493) ENSMOCG00000018133 ENSMOCG00000004179 #22 1700001K19Rik (ENSMOCG00000001086) Dync1h1 (ENSMOCG00000014093) Ppp2r5c (ENSMOCG00000010635) ENSMOCG00000014215 ENSMOCG00000012506 Dlk1 (ENSMOCG00000004545) ENSMOCG00000015016 Begain (ENSMOCG00000019702) Wdr25 (ENSMOCG00000013904) Wars1 (ENSMOCG00000021997) Slc25a47 (ENSMOCG00000005653) Slc25a29 (ENSMOCG00000021563) Yy1 (ENSMOCG00000014983) Degs2 (ENSMOCG00000012466) Evl (ENSMOCG00000018090) Upper Galilee mountains blind mole rat MODERN SPECIES 450 Pax1 (ENSNGAG00000011690) #13 Nkx2-2 (ENSNGAG00000015181) #14 Nkx2-4 (ENSNGAG00000009374) #15 Xrn2 (ENSNGAG00000018138) #16 Kiz (ENSNGAG00000013505) #18 ENSNGAG00000015751 #19 ENSNGAG00000011107 #19 Insm1 (ENSNGAG00000020652) #20 Cfap61 (ENSNGAG00000020907) #21 Crnkl1 (ENSNGAG00000023097) #22 Naa20 (ENSNGAG00000014784) #23 Rin2 (ENSNGAG00000009777) #24 Slc24a3 (ENSNGAG00000011154) #25 Lesser Egyptian jerboa MODERN SPECIES 159 Gzf1 (ENSJJAG00000008172) #7 ENSJJAG00000012022 #8 Cd93 (ENSJJAG00000007591) #9 Sstr4 (ENSJJAG00000023336) #11 Foxa2 (ENSJJAG00000023228) #12 Pax1 (ENSJJAG00000023177) #13 Nkx2-2 (ENSJJAG00000022426) #14 Nkx2-4 (ENSJJAG00000022335) #15 Xrn2 (ENSJJAG00000022128) #16 Kiz (ENSJJAG00000021546) #18 ENSJJAG00000020834 ENSJJAG00000020710 #19 ENSJJAG00000020467 #19 Insm1 (ENSJJAG00000020276) #20 Cfap61 (ENSJJAG00000018922) #21 Crnkl1 (ENSJJAG00000016926) #22 Naa20 (ENSJJAG00000016004) #23 ENSJJAG00000015745 #24 Slc24a3 (ENSJJAG00000015385) #25 Dtd1 (ENSJJAG00000014379) #26 Sec23b (ENSJJAG00000018722) #28 Rbbp9 (ENSJJAG00000017816) #29 Polr3f (ENSJJAG00000017513) #30 Dzank1 (ENSJJAG00000016670) #31 ENSJJAG00000015853 Kat14 (ENSJJAG00000015569) #33 Ovol2 (ENSJJAG00000014942) #34 Mgme1 (ENSJJAG00000014663) #35 ENSJJAG00000014561 #36 ENSJJAG00000014376 Banf2 (ENSJJAG00000014091) #37 Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 564 Alox5 (ENSDORG00000003390) ENSDORG00000025176 ENSDORG00000009791 ENSDORG00000030059 ENSDORG00000024941 Ncoa4 (ENSDORG00000004934) Timm23 (ENSDORG00000027219) Parg (ENSDORG00000004206) ENSDORG00000028855 Ogdhl (ENSDORG00000003535) 1700024G13Rik (ENSDORG00000025082) Chat (ENSDORG00000003024) Slc18a3 (ENSDORG00000003021) ENSDORG00000023724 #22 Kangaroo rat MODERN SPECIES 353 ENSDORG00000028507 Tysnd1 (ENSDORG00000016309) ENSDORG00000023465 Ppa1 (ENSDORG00000006412) Npffr1 (ENSDORG00000006413) Lrrc20 (ENSDORG00000015982) Eif4ebp2 (ENSDORG00000025031) Nodal (ENSDORG00000011307) Pald1 (ENSDORG00000009740) Prf1 (ENSDORG00000009746) Adamts14 (ENSDORG00000002917) Tbata (ENSDORG00000012998) Sgpl1 (ENSDORG00000015465) Pcbd1 (ENSDORG00000002332) ENSDORG00000014215 ENSDORG00000030174 #22 ENSDORG00000028847 Kangaroo rat MODERN SPECIES 418 Gzf1 (ENSDORG00000011855) #7 Nxt1 (ENSDORG00000024690) #8 Cd93 (ENSDORG00000028704) #9 Sstr4 (ENSDORG00000010486) #11 Foxa2 (ENSDORG00000027269) #12 Pax1 (ENSDORG00000016051) #13 Nkx2-2 (ENSDORG00000007972) #14 Nkx2-4 (ENSDORG00000023542) #15 Xrn2 (ENSDORG00000005434) #16 ENSDORG00000024554 #19 ENSDORG00000025962 #19 Insm1 (ENSDORG00000009864) #20 ENSDORG00000000395 ENSDORG00000029623 #21 ENSDORG00000024717 #21 ENSDORG00000000394 #22 Naa20 (ENSDORG00000028339) #23 Rin2 (ENSDORG00000000392) #24 Slc24a3 (ENSDORG00000008187) #25 Scp2d1 (ENSDORG00000002960) Dtd1 (ENSDORG00000006940) #26 Sec23b (ENSDORG00000014203) #28 Polr3f (ENSDORG00000016352) #30 Dzank1 (ENSDORG00000016349) #31 ENSDORG00000009747 Kat14 (ENSDORG00000013195) #33 Pet117 (ENSDORG00000027184) #32 Ovol2 (ENSDORG00000016697) #34 Mgme1 (ENSDORG00000016696) #35 Snx5 (ENSDORG00000012817) #36 Banf2 (ENSDORG00000008561) #37 Rodentia_A ANCESTRAL SPECIES 17 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Sciuridae ANCESTRAL SPECIES 13 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Marmotini ANCESTRAL SPECIES 5 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00390000007696.e.a.a.a ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Marmotini_b ANCESTRAL SPECIES 18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Squirrel MODERN SPECIES 85 INSM1 (ENSSTOG00000022353) #20 CFAP61 (ENSSTOG00000014765) #21 CRNKL1 (ENSSTOG00000014747) #22 NAA20 (ENSSTOG00000014733) #23 RIN2 (ENSSTOG00000014712) #24 SLC24A3 (ENSSTOG00000009809) #25 DTD1 (ENSSTOG00000016282) #26 SMIM26 (ENSSTOG00000033106) #27 SEC23B (ENSSTOG00000025438) #28 RBBP9 (ENSSTOG00000000821) #29 POLR3F (ENSSTOG00000013588) #30 DZANK1 (ENSSTOG00000013579) #31 ZNF133 (ENSSTOG00000013576) KAT14 (ENSSTOG00000010238) #33 PET117 (ENSSTOG00000026528) #32 OVOL2 (ENSSTOG00000024979) #34 MGME1 (ENSSTOG00000019941) #35 SNX5 (ENSSTOG00000015416) #36 Arctic ground squirrel MODERN SPECIES 233 RALGAPA2 (ENSUPAG00010004307) #19 INSM1 (ENSUPAG00010004284) #20 ENSUPAG00010004279 ENSUPAG00010004266 #21 ENSUPAG00010004164 #21 CRNKL1 (ENSUPAG00010004128) #22 NAA20 (ENSUPAG00010004110) #23 RIN2 (ENSUPAG00010004049) #24 SLC24A3 (ENSUPAG00010004015) #25 SCP2D1 (ENSUPAG00010004009) DTD1 (ENSUPAG00010004007) #26 SMIM26 (ENSUPAG00010004005) #27 SEC23B (ENSUPAG00010003976) #28 RBBP9 (ENSUPAG00010003965) #29 POLR3F (ENSUPAG00010003952) #30 DZANK1 (ENSUPAG00010003927) #31 ZNF133 (ENSUPAG00010003916) ENSUPAG00010003905 KAT14 (ENSUPAG00010003862) #33 OVOL2 (ENSUPAG00010003853) #34 MGME1 (ENSUPAG00010003848) #35 Alpin marmot MODERN SPECIES NXT1 (ENSMMMG00000004405) #8 ENSMMMG00000004398 CD93 (ENSMMMG00000004395) #9 THBD (ENSMMMG00000004391) #10 SSTR4 (ENSMMMG00000004385) #11 FOXA2 (ENSMMMG00000004350) #12 PAX1 (ENSMMMG00000004326) #13 NKX2-2 (ENSMMMG00000004284) #14 XRN2 (ENSMMMG00000004161) #16 KIZ (ENSMMMG00000003881) #18 ENSMMMG00000003871 RALGAPA2 (ENSMMMG00000003453) #19 ENSMMMG00000003417 ENSMMMG00000003408 #21 ENSMMMG00000003290 #21 CRNKL1 (ENSMMMG00000003244) #22 NAA20 (ENSMMMG00000003240) #23 RIN2 (ENSMMMG00000003172) #24 SLC24A3 (ENSMMMG00000003105) #25 SCP2D1 (ENSMMMG00000003079) ENSMMMG00000003073 DTD1 (ENSMMMG00000003060) #26 SMIM26 (ENSMMMG00000003045) #27 SEC23B (ENSMMMG00000003024) #28 RBBP9 (ENSMMMG00000003013) #29 POLR3F (ENSMMMG00000002996) #30 DZANK1 (ENSMMMG00000002954) #31 ZNF133 (ENSMMMG00000002935) KAT14 (ENSMMMG00000002887) #33 OVOL2 (ENSMMMG00000002853) #34 MGME1 (ENSMMMG00000002827) #35 Eurasian red squirrel MODERN SPECIES 11 THBD (ENSSVLG00005000349) #10 SSTR4 (ENSSVLG00005000359) #11 ENSSVLG00005000368 FOXA2 (ENSSVLG00005000389) #12 ENSSVLG00005000403 PAX1 (ENSSVLG00005000421) #13 NKX2-2 (ENSSVLG00005000441) #14 NKX2-4 (ENSSVLG00005000455) #15 XRN2 (ENSSVLG00005000470) #16 KIZ (ENSSVLG00005000513) #18 ENSSVLG00005000546 RALGAPA2 (ENSSVLG00005000611) #19 INSM1 (ENSSVLG00005000689) #20 CFAP61 (ENSSVLG00005000731) #21 ENSSVLG00005000777 CRNKL1 (ENSSVLG00005000792) #22 NAA20 (ENSSVLG00005000837) #23 RIN2 (ENSSVLG00005000879) #24 SLC24A3 (ENSSVLG00005000927) #25 SCP2D1 (ENSSVLG00005000950) DTD1 (ENSSVLG00005000962) #26 ENSSVLG00005000978 SMIM26 (ENSSVLG00005000999) #27 SEC23B (ENSSVLG00005001018) #28 RBBP9 (ENSSVLG00005001054) #29 POLR3F (ENSSVLG00005001072) #30 DZANK1 (ENSSVLG00005001106) #31 ZNF133 (ENSSVLG00005001176) KAT14 (ENSSVLG00005001213) #33 OVOL2 (ENSSVLG00005001229) #34 ENSSVLG00005001249 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987.n.a #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 ENSGT00940000162003 #37 Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987.n.a #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 ENSGT00940000162003 #37 Hystricomorpha_b ANCESTRAL SPECIES 31 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987.n.a #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 ENSGT00940000162003 #37 Long-tailed chinchilla MODERN SPECIES 122 ENSCLAG00000015474 ENSCLAG00000011384 CSTL1 (ENSCLAG00000012446) NAPB (ENSCLAG00000011540) GZF1 (ENSCLAG00000014714) #7 NXT1 (ENSCLAG00000012493) #8 CD93 (ENSCLAG00000012062) #9 THBD (ENSCLAG00000011994) #10 FOXA2 (ENSCLAG00000014548) #12 PAX1 (ENSCLAG00000016362) #13 NKX2-2 (ENSCLAG00000016430) #14 XRN2 (ENSCLAG00000013419) #16 KIZ (ENSCLAG00000012565) #18 RALGAPA2 (ENSCLAG00000012502) #19 CFAP61 (ENSCLAG00000014155) #21 CRNKL1 (ENSCLAG00000013859) #22 NAA20 (ENSCLAG00000014313) #23 RIN2 (ENSCLAG00000015234) #24 SLC24A3 (ENSCLAG00000015547) #25 DTD1 (ENSCLAG00000015302) #26 SEC23B (ENSCLAG00000014924) #28 RBBP9 (ENSCLAG00000014851) #29 POLR3F (ENSCLAG00000016296) #30 DZANK1 (ENSCLAG00000013160) #31 ZNF133 (ENSCLAG00000015115) KAT14 (ENSCLAG00000012590) #33 PET117 (ENSCLAG00000015171) #32 OVOL2 (ENSCLAG00000015694) #34 MGME1 (ENSCLAG00000011196) #35 SNX5 (ENSCLAG00000010784) #36 BANF2 (ENSCLAG00000010547) #37 Degu MODERN SPECIES 114 FOXA2 (ENSODEG00000011162) #12 PAX1 (ENSODEG00000012427) #13 ENSODEG00000019878 ENSODEG00000019885 NKX2-2 (ENSODEG00000012371) #14 ENSODEG00000012687 NKX2-4 (ENSODEG00000010842) #15 ENSODEG00000010745 #16 ENSODEG00000011188 KIZ (ENSODEG00000011491) #18 RALGAPA2 (ENSODEG00000011023) #19 INSM1 (ENSODEG00000020028) #20 ENSODEG00000011346 ENSODEG00000012124 #21 ENSODEG00000012675 #21 CRNKL1 (ENSODEG00000012175) #22 NAA20 (ENSODEG00000011704) #23 RIN2 (ENSODEG00000012000) #24 SLC24A3 (ENSODEG00000012016) #25 DTD1 (ENSODEG00000012785) #26 SEC23B (ENSODEG00000011313) #28 RBBP9 (ENSODEG00000011960) #29 POLR3F (ENSODEG00000011521) #30 DZANK1 (ENSODEG00000011655) #31 KAT14 (ENSODEG00000013036) #33 ENSODEG00000012384 PET117 (ENSODEG00000011978) #32 OVOL2 (ENSODEG00000011424) #34 MGME1 (ENSODEG00000011889) #35 ENSODEG00000012412 #36 BANF2 (ENSODEG00000011931) #37 Guinea pig MODERN SPECIES 8 CSTL1 (ENSCPOG00000008734) NAPB (ENSCPOG00000039063) GZF1 (ENSCPOG00000010790) #7 NXT1 (ENSCPOG00000008817) #8 CD93 (ENSCPOG00000010252) #9 THBD (ENSCPOG00000030575) #10 FOXA2 (ENSCPOG00000033370) #12 PAX1 (ENSCPOG00000002886) #13 NKX2-2 (ENSCPOG00000000408) #14 XRN2 (ENSCPOG00000009407) #16 KIZ (ENSCPOG00000005683) #18 RALGAPA2 (ENSCPOG00000001602) #19 ENSCPOG00000038064 ENSCPOG00000039658 #21 ENSCPOG00000001594 #21 CRNKL1 (ENSCPOG00000004418) #22 NAA20 (ENSCPOG00000001593) #23 RIN2 (ENSCPOG00000013179) #24 SLC24A3 (ENSCPOG00000011970) #25 DTD1 (ENSCPOG00000002416) #26 SEC23B (ENSCPOG00000002406) #28 RBBP9 (ENSCPOG00000036556) #29 POLR3F (ENSCPOG00000002400) #30 DZANK1 (ENSCPOG00000002397) #31 ZNF133 (ENSCPOG00000030599) KAT14 (ENSCPOG00000013124) #33 PET117 (ENSCPOG00000031383) #32 OVOL2 (ENSCPOG00000039633) #34 MGME1 (ENSCPOG00000036436) #35 SNX5 (ENSCPOG00000007908) #36 BANF2 (ENSCPOG00000000915) #37 Lagomorpha ANCESTRAL SPECIES 57 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.B ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Pika MODERN SPECIES 1171 ENSOPRG00000009297 #24 ENSOPRG00000009242 #22 Rabbit MODERN SPECIES 15 CSTL1 (ENSOCUG00000024430) ENSOCUG00000025538 NAPB (ENSOCUG00000009263) ENSOCUG00000025214 #7 NXT1 (ENSOCUG00000025924) #8 ENSOCUG00000024138 CD93 (ENSOCUG00000014812) #9 FOXA2 (ENSOCUG00000007368) #12 PAX1 (ENSOCUG00000003276) #13 NKX2-2 (ENSOCUG00000007166) #14 ENSOCUG00000024195 XRN2 (ENSOCUG00000013468) #16 KIZ (ENSOCUG00000013848) #18 RALGAPA2 (ENSOCUG00000017951) #19 CFAP61 (ENSOCUG00000015506) #21 CRNKL1 (ENSOCUG00000015484) #22 NAA20 (ENSOCUG00000015481) #23 RIN2 (ENSOCUG00000015450) #24 SLC24A3 (ENSOCUG00000009833) #25 ENSOCUG00000035674 SCP2D1 (ENSOCUG00000010991) DTD1 (ENSOCUG00000010988) #26 ENSOCUG00000037347 SEC23B (ENSOCUG00000015079) #28 ENSOCUG00000027382 RBBP9 (ENSOCUG00000015074) #29 POLR3F (ENSOCUG00000015067) #30 DZANK1 (ENSOCUG00000015055) #31 ZNF133 (ENSOCUG00000014537) KAT14 (ENSOCUG00000015365) #33 PET117 (ENSOCUG00000037055) #32 Tree shrew MODERN SPECIES 4226 CFAP61 (ENSTBEG00000003098) #21 CRNKL1 (ENSTBEG00000001304) #22 NAA20 (ENSTBEG00000000969) #23 RIN2 (ENSTBEG00000009579) #24 Primates ANCESTRAL SPECIES 17 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Haplorrhini ANCESTRAL SPECIES 13 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Simiiformes ANCESTRAL SPECIES 18 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Catarrhini ANCESTRAL SPECIES 19 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 Hominoidea ANCESTRAL SPECIES 17 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 Hominidae ANCESTRAL SPECIES 18 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00910000147439 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00910000146844.a.b ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00910000148254 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00910000147760 ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n.m.a ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00910000146844.a.b ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00910000148254 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00910000147760 ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n.m.a ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 Pan ANCESTRAL SPECIES 15 ENSGT00910000147439 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00910000146844.a.b ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00910000148254 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00910000147760 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n.m.a ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 Chimpanzee MODERN SPECIES 11 CD93 (ENSPTRG00000013318) #9 THBD (ENSPTRG00000013317) #10 SSTR4 (ENSPTRG00000013316) #11 FOXA2 (ENSPTRG00000048023) #12 ENSPTRG00000045139 ENSPTRG00000044291 PAX1 (ENSPTRG00000013311) #13 NKX2-2 (ENSPTRG00000013310) #14 NKX2-4 (ENSPTRG00000013309) #15 ENSPTRG00000047508 XRN2 (ENSPTRG00000013308) #16 ENSPTRG00000044546 KIZ (ENSPTRG00000046348) #18 RALGAPA2 (ENSPTRG00000013306) #19 CFAP61 (ENSPTRG00000013301) #21 CRNKL1 (ENSPTRG00000030609) #22 NAA20 (ENSPTRG00000013299) #23 RIN2 (ENSPTRG00000013298) #24 SLC24A3 (ENSPTRG00000013294) #25 SCP2D1 (ENSPTRG00000013293) ENSPTRG00000048655 DTD1 (ENSPTRG00000013291) #26 SEC23B (ENSPTRG00000013290) #28 ENSPTRG00000047537 RBBP9 (ENSPTRG00000013289) #29 POLR3F (ENSPTRG00000013287) #30 DZANK1 (ENSPTRG00000013285) #31 ENSPTRG00000043868 ZNF133 (ENSPTRG00000013283) KAT14 (ENSPTRG00000013282) #33 PET117 (ENSPTRG00000052278) #32 Bonobo MODERN SPECIES 11 NXT1 (ENSPPAG00000020479) #8 ENSPPAG00000024534 CD93 (ENSPPAG00000040099) #9 THBD (ENSPPAG00000018179) #10 SSTR4 (ENSPPAG00000036986) #11 ENSPPAG00000031368 #12 ENSPPAG00000024066 ENSPPAG00000043307 PAX1 (ENSPPAG00000035911) #13 NKX2-2 (ENSPPAG00000039042) #14 ENSPPAG00000037349 XRN2 (ENSPPAG00000033549) #16 KIZ (ENSPPAG00000031020) #18 RALGAPA2 (ENSPPAG00000039422) #19 ENSPPAG00000036172 #21 CRNKL1 (ENSPPAG00000027847) #22 NAA20 (ENSPPAG00000016439) #23 RIN2 (ENSPPAG00000037433) #24 ENSPPAG00000035002 SLC24A3 (ENSPPAG00000032340) #25 SCP2D1 (ENSPPAG00000033243) ENSPPAG00000030919 DTD1 (ENSPPAG00000030006) #26 SEC23B (ENSPPAG00000021097) #28 ENSPPAG00000041345 RBBP9 (ENSPPAG00000038694) #29 POLR3F (ENSPPAG00000036681) #30 DZANK1 (ENSPPAG00000030862) #31 ENSPPAG00000032748 ZNF133 (ENSPPAG00000028712) KAT14 (ENSPPAG00000026129) #33 Human MODERN SPECIES 12 NAPB (ENSG00000125814) GZF1 (ENSG00000125812) #7 NXT1 (ENSG00000132661) #8 CD93 (ENSG00000125810) #9 THBD (ENSG00000178726) #10 SSTR4 (ENSG00000132671) #11 FOXA2 (ENSG00000125798) #12 PAX1 (ENSG00000125813) #13 NKX2-2 (ENSG00000125820) #14 NKX2-4 (ENSG00000125816) #15 XRN2 (ENSG00000088930) #16 KIZ (ENSG00000088970) #18 RALGAPA2 (ENSG00000188559) #19 INSM1 (ENSG00000173404) #20 CFAP61 (ENSG00000089101) #21 CRNKL1 (ENSG00000101343) #22 NAA20 (ENSG00000173418) #23 RIN2 (ENSG00000132669) #24 SLC24A3 (ENSG00000185052) #25 SCP2D1 (ENSG00000132631) DTD1 (ENSG00000125821) #26 ENSG00000284776 SMIM26 (ENSG00000232388) #27 SEC23B (ENSG00000101310) #28 RBBP9 (ENSG00000089050) #29 POLR3F (ENSG00000132664) #30 DZANK1 (ENSG00000089091) #31 ZNF133 (ENSG00000125846) PET117 (ENSG00000232838) #32 KAT14 (ENSG00000149474) #33 MGME1 (ENSG00000125871) #35 Gorilla MODERN SPECIES 11 NAPB (ENSGGOG00000008548) GZF1 (ENSGGOG00000023248) #7 ENSGGOG00000012539 #8 FOXA2 (ENSGGOG00000006368) #12 ENSGGOG00000040550 ENSGGOG00000038211 PAX1 (ENSGGOG00000016075) #13 NKX2-2 (ENSGGOG00000008080) #14 ENSGGOG00000027030 #15 ENSGGOG00000038958 XRN2 (ENSGGOG00000013738) #16 ENSGGOG00000022720 KIZ (ENSGGOG00000002290) #18 RALGAPA2 (ENSGGOG00000006329) #19 CFAP61 (ENSGGOG00000014189) #21 CRNKL1 (ENSGGOG00000014176) #22 NAA20 (ENSGGOG00000004247) #23 RIN2 (ENSGGOG00000016772) #24 SLC24A3 (ENSGGOG00000004364) #25 SCP2D1 (ENSGGOG00000005677) ENSGGOG00000042789 DTD1 (ENSGGOG00000000080) #26 SEC23B (ENSGGOG00000022369) #28 ENSGGOG00000025536 RBBP9 (ENSGGOG00000008316) #29 POLR3F (ENSGGOG00000011543) #30 DZANK1 (ENSGGOG00000026375) #31 ENSGGOG00000036870 ZNF133 (ENSGGOG00000015151) KAT14 (ENSGGOG00000010114) #33 PET117 (ENSGGOG00000043345) #32 Orangutan MODERN SPECIES 11 GZF1 (ENSPPYG00000010766) #7 NXT1 (ENSPPYG00000010765) #8 ENSPPYG00000010764 CD93 (ENSPPYG00000010763) #9 THBD (ENSPPYG00000010762) #10 SSTR4 (ENSPPYG00000010761) #11 FOXA2 (ENSPPYG00000040463) #12 PAX1 (ENSPPYG00000010758) #13 NKX2-2 (ENSPPYG00000010757) #14 NKX2-4 (ENSPPYG00000010756) #15 XRN2 (ENSPPYG00000010755) #16 KIZ (ENSPPYG00000010754) #18 RALGAPA2 (ENSPPYG00000010751) #19 INSM1 (ENSPPYG00000010750) #20 CFAP61 (ENSPPYG00000010748) #21 CRNKL1 (ENSPPYG00000010747) #22 NAA20 (ENSPPYG00000010746) #23 RIN2 (ENSPPYG00000010745) #24 SLC24A3 (ENSPPYG00000010743) #25 SCP2D1 (ENSPPYG00000010741) ENSPPYG00000010740 #26 SMIM26 (ENSPPYG00000033260) #27 SEC23B (ENSPPYG00000010739) #28 RBBP9 (ENSPPYG00000036673) #29 POLR3F (ENSPPYG00000010737) #30 DZANK1 (ENSPPYG00000010736) #31 ZNF133 (ENSPPYG00000010734) KAT14 (ENSPPYG00000010733) #33 OVOL2 (ENSPPYG00000010732) #34 MGME1 (ENSPPYG00000010731) #35 SNX5 (ENSPPYG00000010730) #36 Gibbon MODERN SPECIES 3 GZF1 (ENSNLEG00000011565) #7 ENSNLEG00000033556 CD93 (ENSNLEG00000011559) #9 THBD (ENSNLEG00000011558) #10 SSTR4 (ENSNLEG00000018627) #11 ENSNLEG00000031709 ENSNLEG00000031487 #12 PAX1 (ENSNLEG00000010049) #13 NKX2-2 (ENSNLEG00000010048) #14 ENSNLEG00000010047 #15 XRN2 (ENSNLEG00000009991) #16 KIZ (ENSNLEG00000009954) #18 ENSNLEG00000033115 RALGAPA2 (ENSNLEG00000009931) #19 CFAP61 (ENSNLEG00000009893) #21 ENSNLEG00000009862 #22 NAA20 (ENSNLEG00000028442) #23 RIN2 (ENSNLEG00000009844) #24 ENSNLEG00000035380 SLC24A3 (ENSNLEG00000009831) #25 ENSNLEG00000027860 ENSNLEG00000034887 DTD1 (ENSNLEG00000027109) #26 SEC23B (ENSNLEG00000009798) #28 RBBP9 (ENSNLEG00000009793) #29 POLR3F (ENSNLEG00000009778) #30 DZANK1 (ENSNLEG00000009756) #31 ZNF133 (ENSNLEG00000009749) KAT14 (ENSNLEG00000009746) #33 PET117 (ENSNLEG00000035580) #32 ENSNLEG00000009741 #34 Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183105.A.m.b ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b.g.a #26 ENSGT00860000134050 #27 ENSGT00940000153431.b.h #26 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183105.A.m.b ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b.g.a #26 ENSGT00860000134050 #27 ENSGT00940000153431.b.h #26 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861.d #29 ENSGT00940000164207.g.b ENSGT00390000014861.c #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 Vervet Monkey MODERN SPECIES 11 ENSCSAG00000011037 GZF1 (ENSCSAG00000011054) #7 NXT1 (ENSCSAG00000018678) #8 CD93 (ENSCSAG00000011058) #9 THBD (ENSCSAG00000018677) #10 SSTR4 (ENSCSAG00000018676) #11 FOXA2 (ENSCSAG00000011062) #12 PAX1 (ENSCSAG00000011068) #13 NKX2-2 (ENSCSAG00000011072) #14 NKX2-4 (ENSCSAG00000011080) #15 XRN2 (ENSCSAG00000011094) #16 KIZ (ENSCSAG00000011135) #18 RALGAPA2 (ENSCSAG00000011248) #19 INSM1 (ENSCSAG00000018675) #20 CFAP61 (ENSCSAG00000011382) #21 CRNKL1 (ENSCSAG00000011434) #22 NAA20 (ENSCSAG00000011440) #23 RIN2 (ENSCSAG00000011446) #24 ENSCSAG00000011450 SLC24A3 (ENSCSAG00000011456) #25 SCP2D1 (ENSCSAG00000018674) DTD1 (ENSCSAG00000011466) #26 SEC23B (ENSCSAG00000011476) #28 RBBP9 (ENSCSAG00000011497) #29 POLR3F (ENSCSAG00000011513) #30 DZANK1 (ENSCSAG00000011523) #31 ZNF133 (ENSCSAG00000011532) ENSCSAG00000018673 KAT14 (ENSCSAG00000011539) #33 OVOL2 (ENSCSAG00000011547) #34 MGME1 (ENSCSAG00000011551) #35 Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183105.A.m.b ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b.g.a #26 ENSGT00860000134050 #27 ENSGT00550000074823.a.i.b ENSGT00940000153431.b.h #26 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861.d #29 ENSGT00940000164207.g.b ENSGT00390000014861.c #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 Macaca ANCESTRAL SPECIES 16 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183105.A.m.b ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b.g.a #26 ENSGT00860000134050 #27 ENSGT00940000153431.b.h #26 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861.d #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 Pig-tailed macaque MODERN SPECIES 130 NXT1 (ENSMNEG00000027745) #8 ENSMNEG00000024687 CD93 (ENSMNEG00000042460) #9 SSTR4 (ENSMNEG00000038323) #11 FOXA2 (ENSMNEG00000011763) #12 ENSMNEG00000028347 PAX1 (ENSMNEG00000040896) #13 NKX2-2 (ENSMNEG00000045238) #14 NKX2-4 (ENSMNEG00000028280) #15 XRN2 (ENSMNEG00000040626) #16 KIZ (ENSMNEG00000028617) #18 ENSMNEG00000039122 RALGAPA2 (ENSMNEG00000033398) #19 INSM1 (ENSMNEG00000029140) #20 CFAP61 (ENSMNEG00000036910) #21 CRNKL1 (ENSMNEG00000037490) #22 NAA20 (ENSMNEG00000033202) #23 RIN2 (ENSMNEG00000005068) #24 SLC24A3 (ENSMNEG00000029022) #25 ENSMNEG00000043133 ENSMNEG00000040178 #26 SEC23B (ENSMNEG00000030931) #28 ENSMNEG00000028082 ENSMNEG00000031436 #29 POLR3F (ENSMNEG00000033404) #30 DZANK1 (ENSMNEG00000039315) #31 ENSMNEG00000038877 ZNF133 (ENSMNEG00000042900) KAT14 (ENSMNEG00000032919) #33 OVOL2 (ENSMNEG00000032005) #34 MGME1 (ENSMNEG00000035747) #35 Macaca_a ANCESTRAL SPECIES 18 ENSGT00940000162041 #8 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.b.b.b.a.a.b.a.a.a ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b.g.a #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861.d #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 Crab-eating macaque MODERN SPECIES 1 NAPB (ENSMFAG00000012865) ENSMFAG00000058516 GZF1 (ENSMFAG00000042408) #7 NXT1 (ENSMFAG00000065310) #8 ENSMFAG00000026040 CD93 (ENSMFAG00000043644) #9 SSTR4 (ENSMFAG00000017458) #11 FOXA2 (ENSMFAG00000047214) #12 ENSMFAG00000057184 PAX1 (ENSMFAG00000044435) #13 NKX2-2 (ENSMFAG00000044462) #14 XRN2 (ENSMFAG00000038122) #16 KIZ (ENSMFAG00000036086) #18 RALGAPA2 (ENSMFAG00000039275) #19 CFAP61 (ENSMFAG00000040250) #21 CRNKL1 (ENSMFAG00000039893) #22 RIN2 (ENSMFAG00000002995) #24 ENSMFAG00000065169 SLC24A3 (ENSMFAG00000037051) #25 SCP2D1 (ENSMFAG00000050245) ENSMFAG00000034375 #26 SMIM26 (ENSMFAG00000052911) #27 SEC23B (ENSMFAG00000041652) #28 ENSMFAG00000030191 RBBP9 (ENSMFAG00000058087) #29 POLR3F (ENSMFAG00000002227) #30 DZANK1 (ENSMFAG00000041179) #31 ENSMFAG00000033342 ZNF133 (ENSMFAG00000002522) ENSMFAG00000049064 KAT14 (ENSMFAG00000049867) #33 Rhesus MODERN SPECIES 1 NAPB (ENSMMUG00000022388) GZF1 (ENSMMUG00000022387) #7 NXT1 (ENSMMUG00000022386) #8 CD93 (ENSMMUG00000016813) #9 THBD (ENSMMUG00000016814) #10 SSTR4 (ENSMMUG00000016815) #11 FOXA2 (ENSMMUG00000010410) #12 PAX1 (ENSMMUG00000019409) #13 ENSMMUG00000056728 #14 NKX2-4 (ENSMMUG00000011409) #15 XRN2 (ENSMMUG00000011405) #16 KIZ (ENSMMUG00000002060) #18 RALGAPA2 (ENSMMUG00000018371) #19 INSM1 (ENSMMUG00000039294) #20 CFAP61 (ENSMMUG00000042668) #21 CRNKL1 (ENSMMUG00000007709) #22 NAA20 (ENSMMUG00000007708) #23 RIN2 (ENSMMUG00000010114) #24 ENSMMUG00000051129 SLC24A3 (ENSMMUG00000002321) #25 SCP2D1 (ENSMMUG00000050690) DTD1 (ENSMMUG00000012880) #26 SEC23B (ENSMMUG00000012878) #28 RBBP9 (ENSMMUG00000004146) #29 POLR3F (ENSMMUG00000004143) #30 DZANK1 (ENSMMUG00000004139) #31 ENSMMUG00000044359 ZNF133 (ENSMMUG00000014453) KAT14 (ENSMMUG00000023140) #33 OVOL2 (ENSMMUG00000053412) #34 ENSMMUG00000057191 Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183105.A.m.b ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00550000074823.a.i.b ENSGT00940000154327.b.e.b ENSGT00940000153431.b.h #26 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861.c #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 Olive baboon MODERN SPECIES 7 CD93 (ENSPANG00000018432) #9 THBD (ENSPANG00000046781) #10 SSTR4 (ENSPANG00000004090) #11 ENSPANG00000044373 FOXA2 (ENSPANG00000011847) #12 PAX1 (ENSPANG00000008282) #13 ENSPANG00000043988 #14 NKX2-4 (ENSPANG00000014236) #15 XRN2 (ENSPANG00000018088) #16 KIZ (ENSPANG00000025535) #18 ENSPANG00000050604 RALGAPA2 (ENSPANG00000018089) #19 ENSPANG00000046512 CFAP61 (ENSPANG00000024586) #21 ENSPANG00000045223 CRNKL1 (ENSPANG00000017420) #22 NAA20 (ENSPANG00000017143) #23 RIN2 (ENSPANG00000025536) #24 SLC24A3 (ENSPANG00000024113) #25 ENSPANG00000050747 ENSPANG00000030391 ENSPANG00000048696 ENSPANG00000051250 SCP2D1 (ENSPANG00000048632) ENSPANG00000023580 #26 SEC23B (ENSPANG00000025537) #28 ENSPANG00000032511 RBBP9 (ENSPANG00000034230) #29 POLR3F (ENSPANG00000025015) #30 DZANK1 (ENSPANG00000022562) #31 ENSPANG00000031749 Cercopithecinae_d ANCESTRAL SPECIES 2 ENSGT00940000162041 #8 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #9 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183105.A.m.b ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00550000074823.a.i.b ENSGT00940000153431.b.h #26 ENSGT00390000006916.c #28 ENSGT00390000013102.e.a.n ENSGT00390000014861.c #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000156170.f Drill MODERN SPECIES 760 CFAP61 (ENSMLEG00000040095) #21 CRNKL1 (ENSMLEG00000034885) #22 NAA20 (ENSMLEG00000035221) #23 RIN2 (ENSMLEG00000035704) #24 SLC24A3 (ENSMLEG00000029512) #25 ENSMLEG00000042298 DTD1 (ENSMLEG00000036095) #26 SEC23B (ENSMLEG00000032008) #28 ENSMLEG00000022908 RBBP9 (ENSMLEG00000036418) #29 POLR3F (ENSMLEG00000021905) #30 DZANK1 (ENSMLEG00000036173) #31 ENSMLEG00000041185 ZNF133 (ENSMLEG00000044273) KAT14 (ENSMLEG00000041696) #33 PET117 (ENSMLEG00000044298) #32 ENSMLEG00000037499 Sooty mangabey MODERN SPECIES 602 NXT1 (ENSCATG00000019026) #8 ENSCATG00000019258 CD93 (ENSCATG00000009216) #9 SSTR4 (ENSCATG00000019242) #11 FOXA2 (ENSCATG00000033454) #12 ENSCATG00000022190 PAX1 (ENSCATG00000029185) #13 NKX2-2 (ENSCATG00000041599) #14 NKX2-4 (ENSCATG00000023019) #15 XRN2 (ENSCATG00000040350) #16 KIZ (ENSCATG00000042535) #18 ENSCATG00000043761 RALGAPA2 (ENSCATG00000035357) #19 INSM1 (ENSCATG00000037816) #20 CFAP61 (ENSCATG00000043610) #21 CRNKL1 (ENSCATG00000034247) #22 NAA20 (ENSCATG00000027935) #23 RIN2 (ENSCATG00000042503) #24 SLC24A3 (ENSCATG00000034515) #25 ENSCATG00000037045 DTD1 (ENSCATG00000039340) #26 SEC23B (ENSCATG00000026216) #28 ENSCATG00000003757 ENSCATG00000035522 #29 POLR3F (ENSCATG00000019507) #30 DZANK1 (ENSCATG00000040828) #31 ENSCATG00000040967 ZNF133 (ENSCATG00000044755) KAT14 (ENSCATG00000044790) #33 PET117 (ENSCATG00000030530) #32 ENSCATG00000039893 Rhinopithecus ANCESTRAL SPECIES 176 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000155999 #12 ENSGT00950000183087.A.b.b ENSGT00910000146941 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183105.A.m.b ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b.h #26 ENSGT00390000006916.c #28 ENSGT00940000164207.g.b ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00860000136156 Black snub-nosed monkey MODERN SPECIES 90 XRN2 (ENSRBIG00000036193) #16 KIZ (ENSRBIG00000004023) #18 ENSRBIG00000044906 RALGAPA2 (ENSRBIG00000011325) #19 CFAP61 (ENSRBIG00000013830) #21 CRNKL1 (ENSRBIG00000031770) #22 NAA20 (ENSRBIG00000037845) #23 RIN2 (ENSRBIG00000030048) #24 SLC24A3 (ENSRBIG00000026610) #25 ENSRBIG00000039498 SMARCA2 (ENSRBIG00000038618) DMRT2 (ENSRBIG00000038326) DMRT3 (ENSRBIG00000030818) DMRT1 (ENSRBIG00000040985) KANK1 (ENSRBIG00000030454) DOCK8 (ENSRBIG00000031277) ENSRBIG00000041692 ENSRBIG00000034943 ENSRBIG00000042766 PGM5 (ENSRBIG00000031935) TMEM252 (ENSRBIG00000012350) Golden snub-nosed monkey MODERN SPECIES 1446 NAPB (ENSRROG00000044287) GZF1 (ENSRROG00000030533) #7 NXT1 (ENSRROG00000026657) #8 CD93 (ENSRROG00000012087) #9 FOXA2 (ENSRROG00000024272) #12 ENSRROG00000030464 ENSRROG00000040808 PAX1 (ENSRROG00000038854) #13 NKX2-2 (ENSRROG00000041150) #14 NKX2-4 (ENSRROG00000006364) #15 XRN2 (ENSRROG00000044400) #16 ENSRROG00000030791 #18 ENSRROG00000041676 RALGAPA2 (ENSRROG00000037467) #19 CFAP61 (ENSRROG00000040251) #21 CRNKL1 (ENSRROG00000040450) #22 NAA20 (ENSRROG00000036514) #23 Platyrrhini ANCESTRAL SPECIES 11 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861.a #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632.r #36 ENSGT00940000162003 #37 Cebidae ANCESTRAL SPECIES 13 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861.a #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632.r #36 ENSGT00940000162003 #37 Cebidae_a ANCESTRAL SPECIES 2 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861.a #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632.r #36 ENSGT00940000162003 #37 Capuchin MODERN SPECIES 134 NAPB (ENSCCAG00000029344) GZF1 (ENSCCAG00000035601) #7 NXT1 (ENSCCAG00000015478) #8 CD93 (ENSCCAG00000034013) #9 THBD (ENSCCAG00000020711) #10 SSTR4 (ENSCCAG00000019059) #11 FOXA2 (ENSCCAG00000027576) #12 PAX1 (ENSCCAG00000025569) #13 NKX2-2 (ENSCCAG00000035862) #14 NKX2-4 (ENSCCAG00000032197) #15 ENSCCAG00000036857 #16 KIZ (ENSCCAG00000031682) #18 RALGAPA2 (ENSCCAG00000028362) #19 INSM1 (ENSCCAG00000023181) #20 CFAP61 (ENSCCAG00000026777) #21 CRNKL1 (ENSCCAG00000027037) #22 NAA20 (ENSCCAG00000028274) #23 Bolivian squirrel monkey MODERN SPECIES 96 PAX1 (ENSSBOG00000032573) #13 NKX2-2 (ENSSBOG00000032080) #14 XRN2 (ENSSBOG00000021014) #16 KIZ (ENSSBOG00000032917) #18 RALGAPA2 (ENSSBOG00000005301) #19 CFAP61 (ENSSBOG00000031606) #21 CRNKL1 (ENSSBOG00000029672) #22 NAA20 (ENSSBOG00000005179) #23 RIN2 (ENSSBOG00000028798) #24 SLC24A3 (ENSSBOG00000030521) #25 DTD1 (ENSSBOG00000025961) #26 SEC23B (ENSSBOG00000020929) #28 RBBP9 (ENSSBOG00000020458) #29 POLR3F (ENSSBOG00000018207) #30 DZANK1 (ENSSBOG00000030675) #31 ENSSBOG00000028652 ZNF133 (ENSSBOG00000025399) KAT14 (ENSSBOG00000021675) #33 PET117 (ENSSBOG00000018404) #32 ENSSBOG00000033455 OVOL2 (ENSSBOG00000033144) #34 MGME1 (ENSSBOG00000026817) #35 Marmoset MODERN SPECIES 17 THBD (ENSCJAG00000005795) #10 FOXA2 (ENSCJAG00000005785) #12 ENSCJAG00000070048 ENSCJAG00000075555 PAX1 (ENSCJAG00000005773) #13 ENSCJAG00000070559 ENSCJAG00000076879 ENSCJAG00000051781 #14 ENSCJAG00000081459 NKX2-4 (ENSCJAG00000040336) #15 XRN2 (ENSCJAG00000005611) #16 KIZ (ENSCJAG00000005568) #18 RALGAPA2 (ENSCJAG00000005471) #19 INSM1 (ENSCJAG00000040556) #20 CFAP61 (ENSCJAG00000005444) #21 CRNKL1 (ENSCJAG00000005393) #22 ENSCJAG00000005377 #23 RIN2 (ENSCJAG00000005342) #24 SLC24A3 (ENSCJAG00000005325) #25 DTD1 (ENSCJAG00000005306) #26 ENSCJAG00000086632 SEC23B (ENSCJAG00000005179) #28 RBBP9 (ENSCJAG00000005170) #29 POLR3F (ENSCJAG00000005159) #30 DZANK1 (ENSCJAG00000005123) #31 ZNF133 (ENSCJAG00000005089) KAT14 (ENSCJAG00000005057) #33 PET117 (ENSCJAG00000040178) #32 ENSCJAG00000081177 OVOL2 (ENSCJAG00000005049) #34 MGME1 (ENSCJAG00000005037) #35 Mas night monkey MODERN SPECIES 720 CD93 (ENSANAG00000031974) #9 SSTR4 (ENSANAG00000031033) #11 FOXA2 (ENSANAG00000000151) #12 PAX1 (ENSANAG00000031911) #13 NKX2-2 (ENSANAG00000031496) #14 NKX2-4 (ENSANAG00000025954) #15 XRN2 (ENSANAG00000020126) #16 KIZ (ENSANAG00000030324) #18 RALGAPA2 (ENSANAG00000035297) #19 ENSANAG00000025204 INSM1 (ENSANAG00000021754) #20 ENSANAG00000026688 #21 ENSANAG00000033104 #21 ENSANAG00000023984 CRNKL1 (ENSANAG00000024889) #22 ENSANAG00000021111 #23 RIN2 (ENSANAG00000033313) #24 SLC24A3 (ENSANAG00000022086) #25 Tarsier MODERN SPECIES 3057 CRNKL1 (ENSTSYG00000004197) #22 NAA20 (ENSTSYG00000006571) #23 RIN2 (ENSTSYG00000012185) #24 Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Lemuriformes ANCESTRAL SPECIES 44 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c.b #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Mouse lemur MODERN SPECIES 9 CST11 (ENSMICG00000017904) CSTL1 (ENSMICG00000017903) NAPB (ENSMICG00000017902) GZF1 (ENSMICG00000046070) #7 NXT1 (ENSMICG00000044853) #8 CD93 (ENSMICG00000017898) #9 FOXA2 (ENSMICG00000030588) #12 PAX1 (ENSMICG00000016968) #13 NKX2-2 (ENSMICG00000045009) #14 NKX2-4 (ENSMICG00000032695) #15 XRN2 (ENSMICG00000008126) #16 KIZ (ENSMICG00000008114) #18 RALGAPA2 (ENSMICG00000006077) #19 INSM1 (ENSMICG00000037992) #20 CFAP61 (ENSMICG00000006057) #21 CRNKL1 (ENSMICG00000006048) #22 ENSMICG00000006044 #23 RIN2 (ENSMICG00000006035) #24 SLC24A3 (ENSMICG00000006014) #25 DTD1 (ENSMICG00000010771) #26 ENSMICG00000010750 #28 ENSMICG00000042283 #28 RBBP9 (ENSMICG00000047808) #29 POLR3F (ENSMICG00000044519) #30 DZANK1 (ENSMICG00000010726) #31 ZNF133 (ENSMICG00000010713) KAT14 (ENSMICG00000014378) #33 OVOL2 (ENSMICG00000032455) #34 ENSMICG00000014350 #35 ENSMICG00000014327 #36 ENSMICG00000032475 #35 Lemuriformes_a ANCESTRAL SPECIES 137 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c.b #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 Greater bamboo lemur MODERN SPECIES 372 ENSPSMG00000008299 CFAP61 (ENSPSMG00000008275) #21 CRNKL1 (ENSPSMG00000008217) #22 NAA20 (ENSPSMG00000008196) #23 RIN2 (ENSPSMG00000008133) #24 SLC24A3 (ENSPSMG00000008093) #25 Coquerels sifaka MODERN SPECIES 693 NKX2-4 (ENSPCOG00000023067) #15 XRN2 (ENSPCOG00000016468) #16 KIZ (ENSPCOG00000007399) #18 RALGAPA2 (ENSPCOG00000016336) #19 INSM1 (ENSPCOG00000013399) #20 CFAP61 (ENSPCOG00000025735) #21 CRNKL1 (ENSPCOG00000017608) #22 NAA20 (ENSPCOG00000014450) #23 RIN2 (ENSPCOG00000022892) #24 SLC24A3 (ENSPCOG00000012072) #25 DTD1 (ENSPCOG00000028695) #26 SMIM26 (ENSPCOG00000010457) #27 ENSPCOG00000022506 #28 RBBP9 (ENSPCOG00000007470) #29 POLR3F (ENSPCOG00000004543) #30 DZANK1 (ENSPCOG00000022697) #31 ZNF133 (ENSPCOG00000015139) Bushbaby MODERN SPECIES 251 CD93 (ENSOGAG00000017109) #9 THBD (ENSOGAG00000026061) #10 SSTR4 (ENSOGAG00000017105) #11 ENSOGAG00000025509 FOXA2 (ENSOGAG00000033297) #12 PAX1 (ENSOGAG00000033162) #13 NKX2-2 (ENSOGAG00000029474) #14 ENSOGAG00000025951 NKX2-4 (ENSOGAG00000024342) #15 XRN2 (ENSOGAG00000001068) #16 KIZ (ENSOGAG00000010591) #18 RALGAPA2 (ENSOGAG00000011557) #19 INSM1 (ENSOGAG00000034802) #20 ENSOGAG00000031837 CFAP61 (ENSOGAG00000011546) #21 CRNKL1 (ENSOGAG00000011544) #22 NAA20 (ENSOGAG00000011542) #23 RIN2 (ENSOGAG00000011531) #24 SLC24A3 (ENSOGAG00000026410) #25 SCP2D1 (ENSOGAG00000004222) DTD1 (ENSOGAG00000007972) #26 ENSOGAG00000031912 #27 SEC23B (ENSOGAG00000004546) #28 RBBP9 (ENSOGAG00000002919) #29 POLR3F (ENSOGAG00000002916) #30 DZANK1 (ENSOGAG00000002912) #31 ENSOGAG00000002908 Laurasiatheria ANCESTRAL SPECIES 17 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Laurasiatheria_a ANCESTRAL SPECIES 18 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Laurasiatheria_b ANCESTRAL SPECIES 19 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Laurasiatheria_c ANCESTRAL SPECIES 17 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Chiroptera ANCESTRAL SPECIES 7 ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Microchiroptera ANCESTRAL SPECIES 6 ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Greater horseshoe bat MODERN SPECIES 15 THBD (ENSRFEG00010010533) #10 ENSRFEG00010010499 ENSRFEG00010010431 FOXA2 (ENSRFEG00010010354) #12 ENSRFEG00010010271 PAX1 (ENSRFEG00010010205) #13 NKX2-2 (ENSRFEG00010010185) #14 NKX2-4 (ENSRFEG00010010146) #15 XRN2 (ENSRFEG00010010058) #16 ENSRFEG00010010021 KIZ (ENSRFEG00010009832) #18 ENSRFEG00010009788 RALGAPA2 (ENSRFEG00010009655) #19 INSM1 (ENSRFEG00010009617) #20 CFAP61 (ENSRFEG00010009533) #21 CRNKL1 (ENSRFEG00010009485) #22 NAA20 (ENSRFEG00010009410) #23 RIN2 (ENSRFEG00010009330) #24 ENSRFEG00010009294 SLC24A3 (ENSRFEG00010009266) #25 ENSRFEG00010009202 DTD1 (ENSRFEG00010009168) #26 SMIM26 (ENSRFEG00010009139) #27 SEC23B (ENSRFEG00010009046) #28 RBBP9 (ENSRFEG00010008976) #29 POLR3F (ENSRFEG00010008934) #30 DZANK1 (ENSRFEG00010008657) #31 ENSRFEG00010008604 ZNF133 (ENSRFEG00010008595) KAT14 (ENSRFEG00010008509) #33 PET117 (ENSRFEG00010008472) #32 Microbat MODERN SPECIES 1142 PAX1 (ENSMLUG00000014710) #13 NKX2-2 (ENSMLUG00000009371) #14 XRN2 (ENSMLUG00000001536) #16 KIZ (ENSMLUG00000001531) #18 RALGAPA2 (ENSMLUG00000016548) #19 CFAP61 (ENSMLUG00000016527) #21 CRNKL1 (ENSMLUG00000016513) #22 NAA20 (ENSMLUG00000016508) #23 RIN2 (ENSMLUG00000016498) #24 SLC24A3 (ENSMLUG00000005788) #25 Megabat MODERN SPECIES 2365 RALGAPA2 (ENSPVAG00000006210) #19 CFAP61 (ENSPVAG00000006208) #21 CRNKL1 (ENSPVAG00000006207) #22 NAA20 (ENSPVAG00000006205) #23 Equus ANCESTRAL SPECIES 8 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00510000047812.l ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Horse MODERN SPECIES 14 NAPB (ENSECAG00000022016) GZF1 (ENSECAG00000011343) #7 NXT1 (ENSECAG00000035032) #8 CD93 (ENSECAG00000016324) #9 THBD (ENSECAG00000005241) #10 FOXA2 (ENSECAG00000032004) #12 PAX1 (ENSECAG00000016945) #13 NKX2-2 (ENSECAG00000018977) #14 NKX2-4 (ENSECAG00000037105) #15 XRN2 (ENSECAG00000018988) #16 KIZ (ENSECAG00000016626) #18 ENSECAG00000036437 RALGAPA2 (ENSECAG00000019950) #19 INSM1 (ENSECAG00000037552) #20 CFAP61 (ENSECAG00000004364) #21 CRNKL1 (ENSECAG00000022215) #22 NAA20 (ENSECAG00000012609) #23 RIN2 (ENSECAG00000015381) #24 SLC24A3 (ENSECAG00000019334) #25 DTD1 (ENSECAG00000025075) #26 SEC23B (ENSECAG00000025087) #28 RBBP9 (ENSECAG00000001333) #29 POLR3F (ENSECAG00000009920) #30 DZANK1 (ENSECAG00000017081) #31 ENSECAG00000053292 ZNF133 (ENSECAG00000015243) KAT14 (ENSECAG00000017543) #33 PET117 (ENSECAG00000035710) #32 OVOL2 (ENSECAG00000007899) #34 SNX5 (ENSECAG00000017202) #36 MGME1 (ENSECAG00000012675) #35 Donkey MODERN SPECIES 6 GZF1 (ENSEASG00005002557) #7 NXT1 (ENSEASG00005033641) #8 CD93 (ENSEASG00005002547) #9 THBD (ENSEASG00005027531) #10 SSTR4 (ENSEASG00005002540) #11 FOXA2 (ENSEASG00005002535) #12 PAX1 (ENSEASG00005002521) #13 NKX2-2 (ENSEASG00005038540) #14 NKX2-4 (ENSEASG00005002501) #15 XRN2 (ENSEASG00005002484) #16 KIZ (ENSEASG00005002467) #18 ENSEASG00005002454 RALGAPA2 (ENSEASG00005002224) #19 INSM1 (ENSEASG00005002118) #20 CFAP61 (ENSEASG00005002079) #21 CRNKL1 (ENSEASG00005002072) #22 NAA20 (ENSEASG00005002069) #23 RIN2 (ENSEASG00005002067) #24 SLC24A3 (ENSEASG00005002055) #25 SCP2D1 (ENSEASG00005037273) DTD1 (ENSEASG00005002041) #26 SEC23B (ENSEASG00005002036) #28 RBBP9 (ENSEASG00005023627) #29 POLR3F (ENSEASG00005002022) #30 DZANK1 (ENSEASG00005002015) #31 ZNF133 (ENSEASG00005002007) KAT14 (ENSEASG00005001999) #33 PET117 (ENSEASG00005029225) #32 OVOL2 (ENSEASG00005028180) #34 MGME1 (ENSEASG00005001985) #35 SNX5 (ENSEASG00005001975) #36 Carnivora ANCESTRAL SPECIES 20 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Caniformia ANCESTRAL SPECIES ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Caniformia_b ANCESTRAL SPECIES ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Ursidae ANCESTRAL SPECIES 14 ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00660000097475 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Ursus ANCESTRAL SPECIES 177 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00510000047168 ENSGT00390000001146 #33 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Polar bear MODERN SPECIES 382 ENSUMAG00000024959 #19 CFAP61 (ENSUMAG00000024958) #21 CRNKL1 (ENSUMAG00000024957) #22 NAA20 (ENSUMAG00000024956) #23 ENSUMAG00000024955 #24 ENSUMAG00000024954 #24 SLC24A3 (ENSUMAG00000024952) #25 SCP2D1 (ENSUMAG00000024950) DTD1 (ENSUMAG00000024948) #26 SMIM26 (ENSUMAG00000024947) #27 SEC23B (ENSUMAG00000024946) #28 RBBP9 (ENSUMAG00000024945) #29 POLR3F (ENSUMAG00000024944) #30 DZANK1 (ENSUMAG00000024942) #31 ZNF133 (ENSUMAG00000024941) ENSUMAG00000024940 KAT14 (ENSUMAG00000024939) #33 MGME1 (ENSUMAG00000024938) #35 American black bear MODERN SPECIES 5878 CRNKL1 (ENSUAMG00000018586) #22 NAA20 (ENSUAMG00000018589) #23 Giant Panda MODERN SPECIES 4 GZF1 (ENSAMEG00000009853) #7 NXT1 (ENSAMEG00000018729) #8 ENSAMEG00000024065 CD93 (ENSAMEG00000009849) #9 THBD (ENSAMEG00000019083) #10 SSTR4 (ENSAMEG00000019048) #11 FOXA2 (ENSAMEG00000015802) #12 ENSAMEG00000031412 PAX1 (ENSAMEG00000012642) #13 NKX2-2 (ENSAMEG00000029802) #14 NKX2-4 (ENSAMEG00000030670) #15 XRN2 (ENSAMEG00000012581) #16 KIZ (ENSAMEG00000012566) #18 RALGAPA2 (ENSAMEG00000000299) #19 CFAP61 (ENSAMEG00000000288) #21 CRNKL1 (ENSAMEG00000000270) #22 NAA20 (ENSAMEG00000000262) #23 RIN2 (ENSAMEG00000000240) #24 SLC24A3 (ENSAMEG00000000234) #25 SCP2D1 (ENSAMEG00000018743) DTD1 (ENSAMEG00000005878) #26 SMIM26 (ENSAMEG00000025598) #27 SEC23B (ENSAMEG00000005865) #28 RBBP9 (ENSAMEG00000005238) #29 POLR3F (ENSAMEG00000005222) #30 DZANK1 (ENSAMEG00000014660) #31 ZNF133 (ENSAMEG00000014665) ENSAMEG00000027804 KAT14 (ENSAMEG00000005253) #33 PET117 (ENSAMEG00000024609) #32 OVOL2 (ENSAMEG00000025156) #34 Mustelinae ANCESTRAL SPECIES 43 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Ferret MODERN SPECIES 204 NXT1 (ENSMPUG00000019260) #8 CD93 (ENSMPUG00000001163) #9 THBD (ENSMPUG00000019265) #10 SSTR4 (ENSMPUG00000019271) #11 FOXA2 (ENSMPUG00000001166) #12 ENSMPUG00000001167 PAX1 (ENSMPUG00000001187) #13 NKX2-2 (ENSMPUG00000001196) #14 XRN2 (ENSMPUG00000001198) #16 KIZ (ENSMPUG00000001201) #18 ENSMPUG00000019274 ENSMPUG00000001204 RALGAPA2 (ENSMPUG00000001210) #19 INSM1 (ENSMPUG00000001216) #20 CFAP61 (ENSMPUG00000001219) #21 CRNKL1 (ENSMPUG00000001226) #22 NAA20 (ENSMPUG00000001228) #23 RIN2 (ENSMPUG00000001230) #24 ENSMPUG00000001233 SLC24A3 (ENSMPUG00000001234) #25 ENSMPUG00000001236 SCP2D1 (ENSMPUG00000019276) DTD1 (ENSMPUG00000001238) #26 SMIM26 (ENSMPUG00000001239) #27 SEC23B (ENSMPUG00000001242) #28 RBBP9 (ENSMPUG00000001244) #29 ENSMPUG00000001252 #30 DZANK1 (ENSMPUG00000001282) #31 ZNF133 (ENSMPUG00000001287) KAT14 (ENSMPUG00000001292) #33 OVOL2 (ENSMPUG00000001295) #34 American mink MODERN SPECIES 430 RALGAPA2 (ENSNVIG00000007727) #19 INSM1 (ENSNVIG00000007814) #20 ENSNVIG00000007818 ENSNVIG00000007820 #21 ENSNVIG00000007840 #21 CRNKL1 (ENSNVIG00000007860) #22 NAA20 (ENSNVIG00000007901) #23 RIN2 (ENSNVIG00000007999) #24 Canidae ANCESTRAL SPECIES 19 ENSGT00910000144356 ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046.j.a #23 ENSGT00940000161804.d.a ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Canis_lupus ANCESTRAL SPECIES 13 ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT01100000263605.j ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046.j.a #23 ENSGT00940000161804.d.a ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Dingo MODERN SPECIES 343 ENSCAFG00020027464 #7 ENSCAFG00020027465 #8 CD93 (ENSCAFG00020027467) #9 THBD (ENSCAFG00020027468) #10 ENSCAFG00020027470 ENSCAFG00020027471 FOXA2 (ENSCAFG00020027472) #12 PAX1 (ENSCAFG00020027475) #13 NKX2-2 (ENSCAFG00020027477) #14 NKX2-4 (ENSCAFG00020027478) #15 XRN2 (ENSCAFG00020027479) #16 KIZ (ENSCAFG00020027480) #18 RALGAPA2 (ENSCAFG00020027484) #19 CFAP61 (ENSCAFG00020027486) #21 ENSCAFG00020027487 CRNKL1 (ENSCAFG00020027488) #22 ENSCAFG00020027489 #23 ENSCAFG00020027490 RIN2 (ENSCAFG00020027491) #24 SLC24A3 (ENSCAFG00020027492) #25 SCP2D1 (ENSCAFG00020027495) DTD1 (ENSCAFG00020027496) #26 SMIM26 (ENSCAFG00020027497) #27 SEC23B (ENSCAFG00020027498) #28 RBBP9 (ENSCAFG00020027499) #29 POLR3F (ENSCAFG00020027500) #30 ENSCAFG00020027501 #31 DZANK1 (ENSCAFG00020027502) #31 ZNF133 (ENSCAFG00020027503) KAT14 (ENSCAFG00020027504) #33 OVOL2 (ENSCAFG00020027506) #34 Dog MODERN SPECIES 16 NAPB (ENSCAFG00845026852) GZF1 (ENSCAFG00845027001) #7 CD93 (ENSCAFG00845027134) #9 THBD (ENSCAFG00845027195) #10 ENSCAFG00845027219 ENSCAFG00845027242 FOXA2 (ENSCAFG00845027259) #12 PAX1 (ENSCAFG00845027290) #13 NKX2-2 (ENSCAFG00845027437) #14 NKX2-4 (ENSCAFG00845027483) #15 XRN2 (ENSCAFG00845027569) #16 KIZ (ENSCAFG00845028046) #18 RALGAPA2 (ENSCAFG00845028444) #19 CFAP61 (ENSCAFG00845028852) #21 ENSCAFG00845028933 CRNKL1 (ENSCAFG00845028961) #22 NAA20 (ENSCAFG00845029048) #23 ENSCAFG00845029111 RIN2 (ENSCAFG00845029255) #24 SLC24A3 (ENSCAFG00845029352) #25 SCP2D1 (ENSCAFG00845029392) ENSCAFG00845029447 #26 ENSCAFG00845029520 #27 SEC23B (ENSCAFG00845029542) #28 RBBP9 (ENSCAFG00845029587) #29 POLR3F (ENSCAFG00845029615) #30 DZANK1 (ENSCAFG00845015922) #31 ZNF133 (ENSCAFG00845016121) ENSCAFG00845016231 KAT14 (ENSCAFG00845016695) #33 PET117 (ENSCAFG00845016583) #32 Red fox MODERN SPECIES 40 CST11 (ENSVVUG00000012069) CSTL1 (ENSVVUG00000012073) NAPB (ENSVVUG00000012075) GZF1 (ENSVVUG00000012086) #7 NXT1 (ENSVVUG00000012091) #8 ENSVVUG00000012111 PAX1 (ENSVVUG00000012146) #13 NKX2-2 (ENSVVUG00000012163) #14 ENSVVUG00000012172 #15 XRN2 (ENSVVUG00000012178) #16 KIZ (ENSVVUG00000012190) #18 RALGAPA2 (ENSVVUG00000012242) #19 ENSVVUG00000012364 CFAP61 (ENSVVUG00000012388) #21 ENSVVUG00000012539 CRNKL1 (ENSVVUG00000012559) #22 NAA20 (ENSVVUG00000012582) #23 ENSVVUG00000012599 RIN2 (ENSVVUG00000012604) #24 SLC24A3 (ENSVVUG00000012656) #25 ENSVVUG00000012858 DTD1 (ENSVVUG00000012861) #26 SMIM26 (ENSVVUG00000012870) #27 SEC23B (ENSVVUG00000012875) #28 RBBP9 (ENSVVUG00000012898) #29 ENSVVUG00000012920 POLR3F (ENSVVUG00000012925) #30 DZANK1 (ENSVVUG00000013009) #31 ZNF133 (ENSVVUG00000013033) KAT14 (ENSVVUG00000013037) #33 PET117 (ENSVVUG00000013063) #32 Felidae ANCESTRAL SPECIES 3 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Panthera ANCESTRAL SPECIES 2 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926.a.a #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Tiger MODERN SPECIES 535 ENSPTIG00000005641 ENSPTIG00000005550 CST11 (ENSPTIG00000003091) ENSPTIG00000001355 NAPB (ENSPTIG00000019947) GZF1 (ENSPTIG00000019328) #7 NXT1 (ENSPTIG00000003788) #8 CD93 (ENSPTIG00000018580) #9 SSTR4 (ENSPTIG00000003769) #11 PAX1 (ENSPTIG00000017141) #13 NKX2-2 (ENSPTIG00000016807) #14 XRN2 (ENSPTIG00000015683) #16 KIZ (ENSPTIG00000015123) #18 RALGAPA2 (ENSPTIG00000012682) #19 CFAP61 (ENSPTIG00000009217) #21 CRNKL1 (ENSPTIG00000007393) #22 NAA20 (ENSPTIG00000006328) #23 RIN2 (ENSPTIG00000003100) #24 SLC24A3 (ENSPTIG00000021465) #25 SCP2D1 (ENSPTIG00000002789) DTD1 (ENSPTIG00000020971) #26 SEC23B (ENSPTIG00000020593) #28 RBBP9 (ENSPTIG00000020464) #29 POLR3F (ENSPTIG00000020292) #30 DZANK1 (ENSPTIG00000017259) #31 ZNF133 (ENSPTIG00000016359) KAT14 (ENSPTIG00000015439) #33 ENSPTIG00000014999 #32 OVOL2 (ENSPTIG00000014608) #34 MGME1 (ENSPTIG00000014403) #35 SNX5 (ENSPTIG00000013211) #36 Panthera_a ANCESTRAL SPECIES 1 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046.k #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926.a.a #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 leopard MODERN SPECIES 39 NAPB (ENSPPRG00000010805) GZF1 (ENSPPRG00000010040) #7 NXT1 (ENSPPRG00000021392) #8 CD93 (ENSPPRG00000009570) #9 THBD (ENSPPRG00000021378) #10 SSTR4 (ENSPPRG00000021367) #11 FOXA2 (ENSPPRG00000009206) #12 PAX1 (ENSPPRG00000009070) #13 NKX2-2 (ENSPPRG00000008916) #14 NKX2-4 (ENSPPRG00000008761) #15 XRN2 (ENSPPRG00000008732) #16 KIZ (ENSPPRG00000007745) #18 RALGAPA2 (ENSPPRG00000006401) #19 INSM1 (ENSPPRG00000021271) #20 CFAP61 (ENSPPRG00000004321) #21 CRNKL1 (ENSPPRG00000001955) #22 ENSPPRG00000001197 #23 ENSPPRG00000000577 #24 SLC24A3 (ENSPPRG00000022720) #25 SCP2D1 (ENSPPRG00000021046) DTD1 (ENSPPRG00000023943) #26 SEC23B (ENSPPRG00000024318) #28 RBBP9 (ENSPPRG00000024506) #29 POLR3F (ENSPPRG00000024604) #30 DZANK1 (ENSPPRG00000021983) #31 ZNF133 (ENSPPRG00000010030) KAT14 (ENSPPRG00000008577) #33 ENSPPRG00000006693 #32 OVOL2 (ENSPPRG00000006276) #34 MGME1 (ENSPPRG00000005711) #35 SNX5 (ENSPPRG00000005486) #36 lion MODERN SPECIES 3 NAPB (ENSPLOG00000000809) GZF1 (ENSPLOG00000000839) #7 NXT1 (ENSPLOG00000000844) #8 CD93 (ENSPLOG00000000855) #9 THBD (ENSPLOG00000000869) #10 SSTR4 (ENSPLOG00000000946) #11 FOXA2 (ENSPLOG00000000959) #12 PAX1 (ENSPLOG00000000971) #13 NKX2-2 (ENSPLOG00000000985) #14 NKX2-4 (ENSPLOG00000001002) #15 XRN2 (ENSPLOG00000001042) #16 KIZ (ENSPLOG00000001155) #18 RALGAPA2 (ENSPLOG00000001266) #19 INSM1 (ENSPLOG00000001312) #20 CFAP61 (ENSPLOG00000001356) #21 CRNKL1 (ENSPLOG00000001416) #22 NAA20 (ENSPLOG00000001447) #23 RIN2 (ENSPLOG00000001490) #24 SLC24A3 (ENSPLOG00000001538) #25 DTD1 (ENSPLOG00000001574) #26 SMIM26 (ENSPLOG00000001583) #27 SEC23B (ENSPLOG00000001608) #28 RBBP9 (ENSPLOG00000001658) #29 POLR3F (ENSPLOG00000001687) #30 DZANK1 (ENSPLOG00000001729) #31 ZNF133 (ENSPLOG00000001772) KAT14 (ENSPLOG00000001794) #33 ENSPLOG00000001815 #32 OVOL2 (ENSPLOG00000001826) #34 MGME1 (ENSPLOG00000001887) #35 SNX5 (ENSPLOG00000001918) #36 Cat MODERN SPECIES 2 NAPB (ENSFCAG00000037279) GZF1 (ENSFCAG00000006484) #7 NXT1 (ENSFCAG00000006482) #8 CD93 (ENSFCAG00000025238) #9 THBD (ENSFCAG00000011513) #10 SSTR4 (ENSFCAG00000022777) #11 FOXA2 (ENSFCAG00000012368) #12 PAX1 (ENSFCAG00000004293) #13 NKX2-2 (ENSFCAG00000008740) #14 NKX2-4 (ENSFCAG00000045261) #15 XRN2 (ENSFCAG00000007970) #16 KIZ (ENSFCAG00000007966) #18 RALGAPA2 (ENSFCAG00000028385) #19 INSM1 (ENSFCAG00000040680) #20 CFAP61 (ENSFCAG00000000715) #21 CRNKL1 (ENSFCAG00000000714) #22 NAA20 (ENSFCAG00000028113) #23 RIN2 (ENSFCAG00000014527) #24 SLC24A3 (ENSFCAG00000008015) #25 SCP2D1 (ENSFCAG00000003254) ENSFCAG00000051916 DTD1 (ENSFCAG00000013835) #26 SMIM26 (ENSFCAG00000048664) #27 SEC23B (ENSFCAG00000013833) #28 RBBP9 (ENSFCAG00000040375) #29 POLR3F (ENSFCAG00000013828) #30 DZANK1 (ENSFCAG00000025812) #31 ZNF133 (ENSFCAG00000014251) KAT14 (ENSFCAG00000005811) #33 PET117 (ENSFCAG00000035351) #32 OVOL2 (ENSFCAG00000027530) #34 Artiodactyla ANCESTRAL SPECIES 18 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Suina ANCESTRAL SPECIES 9 ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Pig MODERN SPECIES 8 NAPB (ENSSSCG00000031219) GZF1 (ENSSSCG00000007117) #7 NXT1 (ENSSSCG00000007119) #8 CD93 (ENSSSCG00000007116) #9 THBD (ENSSSCG00000053422) #10 FOXA2 (ENSSSCG00000007114) #12 PAX1 (ENSSSCG00000007112) #13 NKX2-2 (ENSSSCG00000040017) #14 NKX2-4 (ENSSSCG00000007110) #15 XRN2 (ENSSSCG00000007109) #16 KIZ (ENSSSCG00000007108) #18 ENSSSCG00000048962 RALGAPA2 (ENSSSCG00000026506) #19 INSM1 (ENSSSCG00000062159) #20 CFAP61 (ENSSSCG00000038858) #21 CRNKL1 (ENSSSCG00000038587) #22 NAA20 (ENSSSCG00000028132) #23 ENSSSCG00000028004 #24 SLC24A3 (ENSSSCG00000007100) #25 SCP2D1 (ENSSSCG00000007099) DTD1 (ENSSSCG00000007098) #26 SMIM26 (ENSSSCG00000025589) #27 SEC23B (ENSSSCG00000007097) #28 RBBP9 (ENSSSCG00000029494) #29 POLR3F (ENSSSCG00000007095) #30 DZANK1 (ENSSSCG00000007094) #31 ZNF133 (ENSSSCG00000007093) KAT14 (ENSSSCG00000007092) #33 PET117 (ENSSSCG00000052391) #32 OVOL2 (ENSSSCG00000036377) #34 MGME1 (ENSSSCG00000007089) #35 Chacoan peccary MODERN SPECIES 801 CSTL1 (ENSCWAG00000017189) NAPB (ENSCWAG00000017225) GZF1 (ENSCWAG00000017910) #7 NXT1 (ENSCWAG00000017956) #8 CD93 (ENSCWAG00000017965) #9 THBD (ENSCWAG00000017996) #10 FOXA2 (ENSCWAG00000007985) #12 PAX1 (ENSCWAG00000008052) #13 NKX2-2 (ENSCWAG00000008122) #14 NKX2-4 (ENSCWAG00000008162) #15 XRN2 (ENSCWAG00000008201) #16 KIZ (ENSCWAG00000008351) #18 RALGAPA2 (ENSCWAG00000008863) #19 INSM1 (ENSCWAG00000009223) #20 CFAP61 (ENSCWAG00000009261) #21 CRNKL1 (ENSCWAG00000009575) #22 NAA20 (ENSCWAG00000009645) #23 ENSCWAG00000009830 #24 SLC24A3 (ENSCWAG00000009885) #25 SCP2D1 (ENSCWAG00000010002) DTD1 (ENSCWAG00000010021) #26 SMIM26 (ENSCWAG00000010058) #27 SEC23B (ENSCWAG00000010080) #28 RBBP9 (ENSCWAG00000010152) #29 ENSCWAG00000010194 #30 DZANK1 (ENSCWAG00000010266) #31 ZNF133 (ENSCWAG00000010383) KAT14 (ENSCWAG00000010453) #33 OVOL2 (ENSCWAG00000010521) #34 MGME1 (ENSCWAG00000010562) #35 SNX5 (ENSCWAG00000010602) #36 Artiodactyla_a ANCESTRAL SPECIES 16 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Artiodactyla_b ANCESTRAL SPECIES 17 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Cetacea ANCESTRAL SPECIES 3 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.g.a ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Odontoceti ANCESTRAL SPECIES 3 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.g.a ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.g.a ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00390000014105.n ENSGT00940000155255.q.b ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.g.a ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Monodontidae ANCESTRAL SPECIES 1 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00390000014105.n ENSGT00940000155255.q.b ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT01000000221541 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.g.a ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Narwhal MODERN SPECIES 299 NXT1 (ENSMMNG00015013866) #8 CD93 (ENSMMNG00015013869) #9 THBD (ENSMMNG00015013881) #10 SSTR4 (ENSMMNG00015013888) #11 FOXA2 (ENSMMNG00015013909) #12 PAX1 (ENSMMNG00015013924) #13 NKX2-2 (ENSMMNG00015013937) #14 NKX2-4 (ENSMMNG00015013943) #15 XRN2 (ENSMMNG00015013954) #16 KIZ (ENSMMNG00015014032) #18 RALGAPA2 (ENSMMNG00015014137) #19 INSM1 (ENSMMNG00015014194) #20 CFAP61 (ENSMMNG00015014206) #21 ENSMMNG00015014237 ENSMMNG00015014247 CRNKL1 (ENSMMNG00015014256) #22 NAA20 (ENSMMNG00015014274) #23 RIN2 (ENSMMNG00015014306) #24 SLC24A3 (ENSMMNG00015014333) #25 SCP2D1 (ENSMMNG00015014357) DTD1 (ENSMMNG00015014368) #26 SMIM26 (ENSMMNG00015014382) #27 SEC23B (ENSMMNG00015014406) #28 RBBP9 (ENSMMNG00015014446) #29 POLR3F (ENSMMNG00015014457) #30 DZANK1 (ENSMMNG00015014485) #31 ENSMMNG00015014525 KAT14 (ENSMMNG00015014546) #33 PET117 (ENSMMNG00015014561) #32 OVOL2 (ENSMMNG00015014572) #34 ENSMMNG00015014585 #35 Beluga whale MODERN SPECIES 48 GZF1 (ENSDLEG00000005091) #7 NXT1 (ENSDLEG00000005096) #8 CD93 (ENSDLEG00000005100) #9 THBD (ENSDLEG00000005104) #10 SSTR4 (ENSDLEG00000005108) #11 FOXA2 (ENSDLEG00000005115) #12 PAX1 (ENSDLEG00000005123) #13 NKX2-2 (ENSDLEG00000005132) #14 NKX2-4 (ENSDLEG00000005154) #15 XRN2 (ENSDLEG00000005166) #16 KIZ (ENSDLEG00000005207) #18 RALGAPA2 (ENSDLEG00000005252) #19 CFAP61 (ENSDLEG00000005301) #21 ENSDLEG00000005319 ENSDLEG00000005324 CRNKL1 (ENSDLEG00000005333) #22 NAA20 (ENSDLEG00000005370) #23 RIN2 (ENSDLEG00000005378) #24 SLC24A3 (ENSDLEG00000005408) #25 ENSDLEG00000005476 SCP2D1 (ENSDLEG00000005480) DTD1 (ENSDLEG00000005506) #26 SMIM26 (ENSDLEG00000005510) #27 SEC23B (ENSDLEG00000005519) #28 RBBP9 (ENSDLEG00000005585) #31 POLR3F (ENSDLEG00000005687) #30 ENSDLEG00000005698 ENSDLEG00000005702 KAT14 (ENSDLEG00000005718) #33 PET117 (ENSDLEG00000005730) #32 OVOL2 (ENSDLEG00000005748) #34 Vaquita MODERN SPECIES 6 SSTR4 (ENSPSNG00000011467) #11 FOXA2 (ENSPSNG00000004696) #12 PAX1 (ENSPSNG00000004773) #13 NKX2-2 (ENSPSNG00000004832) #14 NKX2-4 (ENSPSNG00000004868) #15 XRN2 (ENSPSNG00000004918) #16 KIZ (ENSPSNG00000005041) #18 ENSPSNG00000005168 #19 ENSPSNG00000005197 #19 INSM1 (ENSPSNG00000005223) #20 ENSPSNG00000005235 ENSPSNG00000005250 #21 ENSPSNG00000005292 #21 BLCAP (ENSPSNG00000005346) ENSPSNG00000005363 CRNKL1 (ENSPSNG00000005386) #22 NAA20 (ENSPSNG00000005428) #23 RIN2 (ENSPSNG00000005508) #24 SLC24A3 (ENSPSNG00000005554) #25 SCP2D1 (ENSPSNG00000005607) DTD1 (ENSPSNG00000005619) #26 SMIM26 (ENSPSNG00000005643) #27 SEC23B (ENSPSNG00000005676) #28 RBBP9 (ENSPSNG00000005733) #29 POLR3F (ENSPSNG00000005760) #30 ENSPSNG00000005811 #31 ENSPSNG00000005872 #31 ENSPSNG00000005921 ENSPSNG00000005959 KAT14 (ENSPSNG00000006019) #33 OVOL2 (ENSPSNG00000006064) #34 Dolphin MODERN SPECIES 333 RALGAPA2 (ENSTTRG00000000494) #19 CFAP61 (ENSTTRG00000000486) #21 CRNKL1 (ENSTTRG00000000484) #22 NAA20 (ENSTTRG00000000483) #23 RIN2 (ENSTTRG00000000482) #24 Sperm whale MODERN SPECIES 5 ENSPCTG00005009487 ENSPCTG00005009530 ENSPCTG00005009585 CST3 (ENSPCTG00005009637) CD93 (ENSPCTG00005009671) #9 SSTR4 (ENSPCTG00005009716) #11 FOXA2 (ENSPCTG00005009780) #12 PAX1 (ENSPCTG00005009858) #13 NKX2-2 (ENSPCTG00005009931) #14 NKX2-4 (ENSPCTG00005009959) #15 XRN2 (ENSPCTG00005010006) #16 KIZ (ENSPCTG00005010162) #18 RALGAPA2 (ENSPCTG00005010848) #19 INSM1 (ENSPCTG00005011042) #20 CFAP61 (ENSPCTG00005011086) #21 CRNKL1 (ENSPCTG00005011230) #22 NAA20 (ENSPCTG00005011278) #23 ENSPCTG00005011375 #24 SLC24A3 (ENSPCTG00005011433) #25 SCP2D1 (ENSPCTG00005011622) DTD1 (ENSPCTG00005011639) #26 SMIM26 (ENSPCTG00005011687) #27 SEC23B (ENSPCTG00005011745) #28 RBBP9 (ENSPCTG00005011839) #29 POLR3F (ENSPCTG00005011873) #30 DZANK1 (ENSPCTG00005011932) #31 ENSPCTG00005012165 KAT14 (ENSPCTG00005012290) #33 PET117 (ENSPCTG00005012368) #32 OVOL2 (ENSPCTG00005012398) #34 MGME1 (ENSPCTG00005012453) #35 Blue whale MODERN SPECIES 6 ENSBMSG00010012568 #7 ENSBMSG00010012580 #7 NXT1 (ENSBMSG00010012589) #8 CD93 (ENSBMSG00010012595) #9 THBD (ENSBMSG00010012612) #10 SSTR4 (ENSBMSG00010013828) #11 FOXA2 (ENSBMSG00010013859) #12 PAX1 (ENSBMSG00010013891) #13 NKX2-2 (ENSBMSG00010013921) #14 NKX2-4 (ENSBMSG00010013938) #15 XRN2 (ENSBMSG00010014058) #16 KIZ (ENSBMSG00010014281) #18 RALGAPA2 (ENSBMSG00010014396) #19 INSM1 (ENSBMSG00010014572) #20 CFAP61 (ENSBMSG00010014638) #21 CRNKL1 (ENSBMSG00010014711) #22 NAA20 (ENSBMSG00010014762) #23 RIN2 (ENSBMSG00010014833) #24 SLC24A3 (ENSBMSG00010014883) #25 DTD1 (ENSBMSG00010014971) #26 SMIM26 (ENSBMSG00010015007) #27 SEC23B (ENSBMSG00010015074) #28 RBBP9 (ENSBMSG00010015177) #29 POLR3F (ENSBMSG00010015197) #30 DZANK1 (ENSBMSG00010015220) #31 ZNF133 (ENSBMSG00010015302) KAT14 (ENSBMSG00010015393) #33 PET117 (ENSBMSG00010015436) #32 OVOL2 (ENSBMSG00010015464) #34 ENSBMSG00010015495 #35 ENSBMSG00010015525 #36 Pecora ANCESTRAL SPECIES 9 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Percora_a ANCESTRAL SPECIES 10 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Bovidae ANCESTRAL SPECIES 10 ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h.a.b ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 Bovinae ANCESTRAL SPECIES 20 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000153362.a.cb.b.a.a ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT00390000001138.a.g.b ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h.a.b ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Bos ANCESTRAL SPECIES 22 ENSGT00390000005826.a.b ENSGT00870000136554.jb #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137.d #13 ENSGT00940000153362.a.cb.b.a.a ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B.d #24 ENSGT00390000001138.a.g.b ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h.a.b ENSGT00940000162260.h.a.a ENSGT00390000001146 #33 ENSGT00520000059926 #32 Bos_a ANCESTRAL SPECIES 7 ENSGT00390000005826.a.b ENSGT00870000136554.jb #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137.d #13 ENSGT00940000153362.a.cb.b.a.a ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B.d #24 ENSGT00960000190537 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00950000183210.d.a.c.a.a.b.f.a.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h.a.b ENSGT00390000001146 #33 ENSGT00940000159359 #34 Wild yak MODERN SPECIES 194 CD93 (ENSBMUG00000003082) #9 ENSBMUG00000003102 #10 FOXA2 (ENSBMUG00000003127) #12 PAX1 (ENSBMUG00000003140) #13 ENSBMUG00000003171 NKX2-2 (ENSBMUG00000003181) #14 XRN2 (ENSBMUG00000003295) #16 KIZ (ENSBMUG00000003411) #18 RALGAPA2 (ENSBMUG00000003599) #19 CFAP61 (ENSBMUG00000003762) #21 CRNKL1 (ENSBMUG00000003809) #22 NAA20 (ENSBMUG00000003835) #23 RIN2 (ENSBMUG00000003883) #24 ENSBMUG00000003910 SLC24A3 (ENSBMUG00000003930) #25 SCP2D1 (ENSBMUG00000003945) ENSBMUG00000003967 DTD1 (ENSBMUG00000004000) #26 SMIM26 (ENSBMUG00000004015) #27 SEC23B (ENSBMUG00000004165) #28 RBBP9 (ENSBMUG00000004226) #29 POLR3F (ENSBMUG00000004240) #30 DZANK1 (ENSBMUG00000004305) #31 ENSBMUG00000004403 Domestic yak MODERN SPECIES 3 ENSBGRG00000007043 CD93 (ENSBGRG00000006986) #9 THBD (ENSBGRG00000006963) #10 FOXA2 (ENSBGRG00000006927) #12 PAX1 (ENSBGRG00000006855) #13 ENSBGRG00000006824 #13 ENSBGRG00000006808 NKX2-2 (ENSBGRG00000006790) #14 NKX2-4 (ENSBGRG00000006760) #15 XRN2 (ENSBGRG00000006633) #16 KIZ (ENSBGRG00000006486) #18 ENSBGRG00000006333 #19 ENSBGRG00000006247 #19 INSM1 (ENSBGRG00000006219) #20 CFAP61 (ENSBGRG00000006111) #21 CRNKL1 (ENSBGRG00000006006) #22 NAA20 (ENSBGRG00000005893) #23 ENSBGRG00000005870 #24 ENSBGRG00000005832 #24 SLC24A3 (ENSBGRG00000005785) #25 ENSBGRG00000005768 DTD1 (ENSBGRG00000005731) #26 SMIM26 (ENSBGRG00000005700) #27 SEC23B (ENSBGRG00000005623) #28 RBBP9 (ENSBGRG00000005523) #29 POLR3F (ENSBGRG00000005416) #30 DZANK1 (ENSBGRG00000005266) #31 ZNF133 (ENSBGRG00000005240) KAT14 (ENSBGRG00000005198) #33 ENSBGRG00000005155 #34 MGME1 (ENSBGRG00000005078) #35 Bos_b ANCESTRAL SPECIES 4 ENSGT00390000005826.a.b ENSGT00870000136554.jb #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155999 #12 ENSGT00940000159137.d #13 ENSGT00940000153362.a.bb.b.a ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B.d #24 ENSGT00390000001138.a.g.b ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00950000183210.d.a.c.a.a.b.f.a.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h.a.b ENSGT00940000162260.h.a.a ENSGT00390000001146 #33 Cow MODERN SPECIES 4 ENSBTAG00000027420 NAPB (ENSBTAG00000032704) GZF1 (ENSBTAG00000008908) #7 NXT1 (ENSBTAG00000004993) #8 CD93 (ENSBTAG00000004207) #9 THBD (ENSBTAG00000048591) #10 FOXA2 (ENSBTAG00000012407) #12 PAX1 (ENSBTAG00000006742) #13 ENSBTAG00000035643 NKX2-2 (ENSBTAG00000010277) #14 NKX2-4 (ENSBTAG00000011312) #15 XRN2 (ENSBTAG00000011304) #16 KIZ (ENSBTAG00000020988) #18 RALGAPA2 (ENSBTAG00000014178) #19 CFAP61 (ENSBTAG00000009291) #21 CRNKL1 (ENSBTAG00000008472) #22 NAA20 (ENSBTAG00000001144) #23 RIN2 (ENSBTAG00000020382) #24 ENSBTAG00000032893 SLC24A3 (ENSBTAG00000011882) #25 SCP2D1 (ENSBTAG00000005202) ENSBTAG00000012276 DTD1 (ENSBTAG00000008964) #26 SMIM26 (ENSBTAG00000051249) #27 SEC23B (ENSBTAG00000018295) #28 RBBP9 (ENSBTAG00000008826) #29 POLR3F (ENSBTAG00000008825) #30 ENSBTAG00000052347 DZANK1 (ENSBTAG00000004622) #31 ZNF133 (ENSBTAG00000004620) KAT14 (ENSBTAG00000018978) #33 Hybrid Bos Indicus MODERN SPECIES 4 NAPB (ENSBIXG00005000942) GZF1 (ENSBIXG00005010698) #7 NXT1 (ENSBIXG00005010690) #8 CD93 (ENSBIXG00005010666) #9 ENSBIXG00005000916 THBD (ENSBIXG00005010640) #10 FOXA2 (ENSBIXG00005000913) #12 PAX1 (ENSBIXG00005010606) #13 ENSBIXG00005000694 ENSBIXG00005000714 #15 XRN2 (ENSBIXG00005006105) #16 ENSBIXG00005010385 #18 RALGAPA2 (ENSBIXG00005010322) #19 INSM1 (ENSBIXG00005010299) #20 CFAP61 (ENSBIXG00005010280) #21 CRNKL1 (ENSBIXG00005010247) #22 NAA20 (ENSBIXG00005010224) #23 RIN2 (ENSBIXG00005010179) #24 ENSBIXG00005010143 SLC24A3 (ENSBIXG00005010121) #25 SCP2D1 (ENSBIXG00005000779) DTD1 (ENSBIXG00005010081) #26 ENSBIXG00005010061 SMIM26 (ENSBIXG00005000771) #27 SEC23B (ENSBIXG00005010022) #28 RBBP9 (ENSBIXG00005009978) #29 POLR3F (ENSBIXG00005009958) #30 DZANK1 (ENSBIXG00005009929) #31 ENSBIXG00005009868 ENSBIXG00005006413 KAT14 (ENSBIXG00005009829) #33 American bison MODERN SPECIES 2997 ENSBBBG00000022535 CSTL1 (ENSBBBG00000022543) NAPB (ENSBBBG00000022632) GZF1 (ENSBBBG00000022655) #7 CD93 (ENSBBBG00000005967) #9 THBD (ENSBBBG00000022684) #10 FOXA2 (ENSBBBG00000022700) #12 PAX1 (ENSBBBG00000022763) #13 ENSBBBG00000022780 ENSBBBG00000022786 #14 XRN2 (ENSBBBG00000022814) #16 KIZ (ENSBBBG00000022908) #18 RALGAPA2 (ENSBBBG00000022984) #19 ENSBBBG00000022996 #20 CFAP61 (ENSBBBG00000006046) #21 CRNKL1 (ENSBBBG00000008793) #22 NAA20 (ENSBBBG00000023097) #23 RIN2 (ENSBBBG00000023140) #24 ENSBBBG00000023147 SLC24A3 (ENSBBBG00000000461) #25 SCP2D1 (ENSBBBG00000000425) DTD1 (ENSBBBG00000000410) #26 SMIM26 (ENSBBBG00000000399) #27 SEC23B (ENSBBBG00000023236) #28 RBBP9 (ENSBBBG00000006080) #29 POLR3F (ENSBBBG00000023256) #30 DZANK1 (ENSBBBG00000006112) #31 Caprinae ANCESTRAL SPECIES 23 ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00950000183014.f.a.h.u.a.a.b.a ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000155114.wb.b ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT00390000001138.a.g ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00860000134050 #27 ENSGT00940000153431.b.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260.h.a.b ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 Rambouillet Sheep MODERN SPECIES 4 GZF1 (ENSOARG00020004766) #7 NXT1 (ENSOARG00020004744) #8 ENSOARG00020004719 CD93 (ENSOARG00020004706) #9 ENSOARG00020004667 FOXA2 (ENSOARG00020004643) #12 ENSOARG00020004631 PAX1 (ENSOARG00020004579) #13 NKX2-2 (ENSOARG00020004554) #14 NKX2-4 (ENSOARG00020004533) #15 XRN2 (ENSOARG00020004498) #16 KIZ (ENSOARG00020004321) #18 RALGAPA2 (ENSOARG00020003837) #19 INSM1 (ENSOARG00020003800) #20 CFAP61 (ENSOARG00020003632) #21 CRNKL1 (ENSOARG00020003543) #22 NAA20 (ENSOARG00020003499) #23 RIN2 (ENSOARG00020003240) #24 ENSOARG00020023127 SLC24A3 (ENSOARG00020023051) #25 SCP2D1 (ENSOARG00020023032) ENSOARG00020023011 #26 SMIM26 (ENSOARG00020022969) #27 SEC23B (ENSOARG00020022920) #28 RBBP9 (ENSOARG00020022901) #29 POLR3F (ENSOARG00020022881) #30 DZANK1 (ENSOARG00020022592) #31 ENSOARG00020022555 ENSOARG00020022530 KAT14 (ENSOARG00020022469) #33 PET117 (ENSOARG00020022446) #32 Goat MODERN SPECIES 4 CD93 (ENSCHIG00000009092) #9 THBD (ENSCHIG00000010975) #10 ENSCHIG00000022438 FOXA2 (ENSCHIG00000013879) #12 PAX1 (ENSCHIG00000025250) #13 NKX2-2 (ENSCHIG00000025252) #14 NKX2-4 (ENSCHIG00000017092) #15 ENSCHIG00000009213 XRN2 (ENSCHIG00000006921) #16 KIZ (ENSCHIG00000020496) #18 ENSCHIG00000001410 ENSCHIG00000005268 RALGAPA2 (ENSCHIG00000023081) #19 INSM1 (ENSCHIG00000002944) #20 CFAP61 (ENSCHIG00000022048) #21 CRNKL1 (ENSCHIG00000013171) #22 NAA20 (ENSCHIG00000021922) #23 RIN2 (ENSCHIG00000009997) #24 ENSCHIG00000020114 ENSCHIG00000008840 SLC24A3 (ENSCHIG00000010684) #25 SCP2D1 (ENSCHIG00000007792) ENSCHIG00000024743 #26 SEC23B (ENSCHIG00000016382) #28 RBBP9 (ENSCHIG00000024182) #29 POLR3F (ENSCHIG00000014743) #30 DZANK1 (ENSCHIG00000023950) #31 ENSCHIG00000015086 KAT14 (ENSCHIG00000023963) #33 PET117 (ENSCHIG00000008463) #32 OVOL2 (ENSCHIG00000019495) #34 Siberian musk deer MODERN SPECIES 1194 CD93 (ENSMMSG00000018871) #9 THBD (ENSMMSG00000018897) #10 FOXA2 (ENSMMSG00000018910) #12 PAX1 (ENSMMSG00000018943) #13 NKX2-2 (ENSMMSG00000018973) #14 ENSMMSG00000018994 ENSMMSG00000019016 NKX2-4 (ENSMMSG00000019032) #15 XRN2 (ENSMMSG00000019064) #16 KIZ (ENSMMSG00000019151) #18 RALGAPA2 (ENSMMSG00000019313) #19 INSM1 (ENSMMSG00000019511) #20 ENSMMSG00000019522 ENSMMSG00000019535 #21 ENSMMSG00000019564 #21 CRNKL1 (ENSMMSG00000019594) #22 NAA20 (ENSMMSG00000019613) #23 RIN2 (ENSMMSG00000019665) #24 SLC24A3 (ENSMMSG00000019736) #25 SCP2D1 (ENSMMSG00000019818) DTD1 (ENSMMSG00000019829) #26 ENSMMSG00000019846 #27 SEC23B (ENSMMSG00000019873) #28 RBBP9 (ENSMMSG00000019965) #29 POLR3F (ENSMMSG00000019988) #30 DZANK1 (ENSMMSG00000020027) #31 ZNF133 (ENSMMSG00000020117) KAT14 (ENSMMSG00000020149) #33 OVOL2 (ENSMMSG00000020182) #34 MGME1 (ENSMMSG00000020210) #35 SNX5 (ENSMMSG00000020231) #36 Yarkand deer MODERN SPECIES 15 THBD (ENSCHYG00000023542) #10 ENSCHYG00000023501 ENSCHYG00000023462 FOXA2 (ENSCHYG00000023420) #12 PAX1 (ENSCHYG00000023364) #13 ENSCHYG00000023344 NKX2-2 (ENSCHYG00000023304) #14 NKX2-4 (ENSCHYG00000023282) #15 XRN2 (ENSCHYG00000022819) #16 ENSCHYG00000022761 ENSCHYG00000022734 KIZ (ENSCHYG00000022176) #18 RALGAPA2 (ENSCHYG00000021147) #19 INSM1 (ENSCHYG00000021030) #20 CFAP61 (ENSCHYG00000020914) #21 CRNKL1 (ENSCHYG00000020782) #22 NAA20 (ENSCHYG00000020635) #23 RIN2 (ENSCHYG00000020319) #24 ENSCHYG00000020275 SLC24A3 (ENSCHYG00000020129) #25 SCP2D1 (ENSCHYG00000020102) DTD1 (ENSCHYG00000019989) #26 SMIM26 (ENSCHYG00000019910) #27 SEC23B (ENSCHYG00000019541) #28 RBBP9 (ENSCHYG00000019457) #29 POLR3F (ENSCHYG00000019333) #30 DZANK1 (ENSCHYG00000018900) #31 ZNF133 (ENSCHYG00000018818) ENSCHYG00000018765 KAT14 (ENSCHYG00000018671) #33 OVOL2 (ENSCHYG00000018615) #34 Camelidae ANCESTRAL SPECIES 49 ENSGT00940000162636.B ENSGT00910000144356 ENSGT00900000141212 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000162041 #8 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00940000162260 ENSGT00390000001146 #33 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Arabian camel MODERN SPECIES 10 ENSCDRG00005019617 CSTL1 (ENSCDRG00005019624) ENSCDRG00005019640 GZF1 (ENSCDRG00005019674) #7 ENSCDRG00005019685 #8 CD93 (ENSCDRG00005019688) #9 ENSCDRG00005019694 FOXA2 (ENSCDRG00005019700) #12 PAX1 (ENSCDRG00005019717) #13 NKX2-2 (ENSCDRG00005019726) #14 XRN2 (ENSCDRG00005019738) #16 KIZ (ENSCDRG00005019794) #18 ENSCDRG00005020052 #19 ENSCDRG00005020129 #19 CFAP61 (ENSCDRG00005020211) #21 CRNKL1 (ENSCDRG00005020237) #22 NAA20 (ENSCDRG00005020249) #23 RIN2 (ENSCDRG00005020269) #24 SLC24A3 (ENSCDRG00005020283) #25 SCP2D1 (ENSCDRG00005020314) DTD1 (ENSCDRG00005003474) #26 SMIM26 (ENSCDRG00005003504) #27 SEC23B (ENSCDRG00005003558) #28 RBBP9 (ENSCDRG00005003649) #29 POLR3F (ENSCDRG00005003691) #30 DZANK1 (ENSCDRG00005003737) #31 ZNF133 (ENSCDRG00005003997) KAT14 (ENSCDRG00005004093) #33 OVOL2 (ENSCDRG00005004167) #34 MGME1 (ENSCDRG00005004194) #35 SNX5 (ENSCDRG00005004244) #36 Eulipotyphla ANCESTRAL SPECIES 391 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 Hedgehog MODERN SPECIES 532 CFAP61 (ENSEEUG00000000424) #21 CRNKL1 (ENSEEUG00000000413) #22 Common shrew MODERN SPECIES 5346 CFAP61 (ENSSARG00000006515) #21 CRNKL1 (ENSSARG00000006443) #22 NAA20 (ENSSARG00000006435) #23 Atlantogenata ANCESTRAL SPECIES 6 ENSGT00870000136554 #7 ENSGT00940000162041.l #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Xenarthra ANCESTRAL SPECIES 347 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 Sloth MODERN SPECIES 6096 CFAP61 (ENSCHOG00000006393) #21 CRNKL1 (ENSCHOG00000006371) #22 NAA20 (ENSCHOG00000006363) #23 Armadillo MODERN SPECIES 425 PAX1 (ENSDNOG00000033546) #13 NKX2-2 (ENSDNOG00000038407) #14 ENSDNOG00000025932 NKX2-4 (ENSDNOG00000040998) #15 XRN2 (ENSDNOG00000001895) #16 KIZ (ENSDNOG00000046969) #18 RALGAPA2 (ENSDNOG00000016236) #19 INSM1 (ENSDNOG00000033318) #20 CFAP61 (ENSDNOG00000016231) #21 CRNKL1 (ENSDNOG00000016226) #22 NAA20 (ENSDNOG00000034715) #23 RIN2 (ENSDNOG00000016218) #24 SLC24A3 (ENSDNOG00000016125) #25 ENSDNOG00000004039 Afrotheria ANCESTRAL SPECIES 3 ENSGT00870000136554 #7 ENSGT00940000162041.l #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 ENSGT00940000162003 #37 Afrotheria_a ANCESTRAL SPECIES 3 ENSGT00870000136554 #7 ENSGT00940000162041.l #8 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 ENSGT00940000162003 #37 Elephant MODERN SPECIES 180 THBD (ENSLAFG00000012832) #10 ENSLAFG00000032254 #11 FOXA2 (ENSLAFG00000026345) #12 ENSLAFG00000031871 PAX1 (ENSLAFG00000008908) #13 NKX2-2 (ENSLAFG00000002379) #14 ENSLAFG00000014638 #15 XRN2 (ENSLAFG00000014624) #16 KIZ (ENSLAFG00000002389) #18 ENSLAFG00000032497 #19 ENSLAFG00000011596 #19 INSM1 (ENSLAFG00000011594) #20 ENSLAFG00000029531 ENSLAFG00000028424 #21 ENSLAFG00000004520 #21 CRNKL1 (ENSLAFG00000004512) #22 NAA20 (ENSLAFG00000004510) #23 RIN2 (ENSLAFG00000015169) #24 SLC24A3 (ENSLAFG00000012423) #25 SCP2D1 (ENSLAFG00000007035) DTD1 (ENSLAFG00000003645) #26 ENSLAFG00000032592 SEC23B (ENSLAFG00000004934) #28 RBBP9 (ENSLAFG00000001273) #29 POLR3F (ENSLAFG00000004929) #30 DZANK1 (ENSLAFG00000010369) #31 KAT14 (ENSLAFG00000005652) #33 PET117 (ENSLAFG00000028489) #32 OVOL2 (ENSLAFG00000010597) #34 MGME1 (ENSLAFG00000010595) #35 SNX5 (ENSLAFG00000010593) #36 Hyrax MODERN SPECIES 331 CRNKL1 (ENSPCAG00000003296) #22 Tenrec MODERN SPECIES 6677 CFAP61 (ENSETEG00000003718) #21 CRNKL1 (ENSETEG00000003711) #22 NAA20 (ENSETEG00000003709) #23 ENSETEG00000003702 Marsupialia DUPLICATION Marsupialia ANCESTRAL SPECIES 19 ENSGT00940000163249 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931.g #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931.g #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349.b #35 ENSGT00940000154632 #36 Diprotodontia ANCESTRAL SPECIES 2 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931.g #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349.b #35 ENSGT00940000154632 #36 Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000163276 #10 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931.g #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00860000134050 #27 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349.b #35 ENSGT00940000154632 #36 Common wonbat MODERN SPECIES 1073 SSTR4 (ENSVURG00010005456) #11 FOXA2 (ENSVURG00010005464) #12 PAX1 (ENSVURG00010005488) #13 NKX2-2 (ENSVURG00010005501) #14 NKX2-4 (ENSVURG00010005513) #15 XRN2 (ENSVURG00010005531) #16 KIZ (ENSVURG00010005599) #18 ENSVURG00010005678 RALGAPA2 (ENSVURG00010005756) #19 INSM1 (ENSVURG00010005820) #20 ENSVURG00010005834 ENSVURG00010005838 ENSVURG00010005844 #21 ENSVURG00010005874 #21 ENSVURG00010005888 #21 ENSVURG00010005903 #22 NAA20 (ENSVURG00010005948) #23 ENSVURG00010005965 RIN2 (ENSVURG00010005982) #24 SLC24A3 (ENSVURG00010006055) #25 ENSVURG00010006221 SCP2D1 (ENSVURG00010006243) DTD1 (ENSVURG00010006268) #26 ENSVURG00010006286 #27 SEC23B (ENSVURG00010006298) #28 RBBP9 (ENSVURG00010006319) #29 POLR3F (ENSVURG00010006328) #30 DZANK1 (ENSVURG00010006342) #31 KAT14 (ENSVURG00010006371) #33 ENSVURG00010006385 OVOL2 (ENSVURG00010006395) #34 koala MODERN SPECIES 1 ENSPCIG00000013801 CD93 (ENSPCIG00000015492) #9 ENSPCIG00000015494 SSTR4 (ENSPCIG00000015498) #11 FOXA2 (ENSPCIG00000025918) #12 PAX1 (ENSPCIG00000031385) #13 NKX2-2 (ENSPCIG00000034162) #14 ENSPCIG00000031596 NKX2-4 (ENSPCIG00000024538) #15 XRN2 (ENSPCIG00000001237) #16 ENSPCIG00000001346 #19 ENSPCIG00000008868 #19 INSM1 (ENSPCIG00000025810) #20 ENSPCIG00000034193 CFAP61 (ENSPCIG00000025813) #21 CRNKL1 (ENSPCIG00000025825) #22 NAA20 (ENSPCIG00000025955) #23 RIN2 (ENSPCIG00000020994) #24 SLC24A3 (ENSPCIG00000018234) #25 SCP2D1 (ENSPCIG00000019128) ENSPCIG00000001009 DTD1 (ENSPCIG00000000993) #26 ENSPCIG00000036206 #27 SEC23B (ENSPCIG00000000942) #28 RBBP9 (ENSPCIG00000000922) #29 POLR3F (ENSPCIG00000000908) #30 DZANK1 (ENSPCIG00000000872) #31 KAT14 (ENSPCIG00000000838) #33 ENSPCIG00000037388 #32 OVOL2 (ENSPCIG00000025433) #34 MGME1 (ENSPCIG00000000777) #35 Wallaby MODERN SPECIES 8214 ENSMEUG00000012167 #22 NAA20 (ENSMEUG00000012154) #23 Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES 1 ENSSHAG00000032132 ENSSHAG00000031598 NAPB (ENSSHAG00000022875) ENSSHAG00000009367 #7 CD93 (ENSSHAG00000031195) #9 THBD (ENSSHAG00000028423) #10 SSTR4 (ENSSHAG00000012685) #11 FOXA2 (ENSSHAG00000014905) #12 PAX1 (ENSSHAG00000017556) #13 NKX2-2 (ENSSHAG00000004915) #14 NKX2-4 (ENSSHAG00000024664) #15 XRN2 (ENSSHAG00000023603) #16 KIZ (ENSSHAG00000027601) #18 RALGAPA2 (ENSSHAG00000011234) #19 CFAP61 (ENSSHAG00000013786) #21 ENSSHAG00000030457 #22 ENSSHAG00000022346 #23 ENSSHAG00000027541 #22 ENSSHAG00000025214 #23 RIN2 (ENSSHAG00000014834) #24 SLC24A3 (ENSSHAG00000015606) #25 SCP2D1 (ENSSHAG00000017843) DTD1 (ENSSHAG00000028090) #26 SEC23B (ENSSHAG00000018083) #28 RBBP9 (ENSSHAG00000023516) #29 POLR3F (ENSSHAG00000018160) #30 DZANK1 (ENSSHAG00000018171) #31 KAT14 (ENSSHAG00000018332) #33 OVOL2 (ENSSHAG00000018466) #34 MGME1 (ENSSHAG00000018526) #35 SNX5 (ENSSHAG00000018544) #36 Tasmanian devil MODERN SPECIES 1 NAPB (ENSSHAG00000022875) ENSSHAG00000009367 #7 CD93 (ENSSHAG00000031195) #9 THBD (ENSSHAG00000028423) #10 SSTR4 (ENSSHAG00000012685) #11 FOXA2 (ENSSHAG00000014905) #12 PAX1 (ENSSHAG00000017556) #13 NKX2-2 (ENSSHAG00000004915) #14 NKX2-4 (ENSSHAG00000024664) #15 XRN2 (ENSSHAG00000023603) #16 KIZ (ENSSHAG00000027601) #18 RALGAPA2 (ENSSHAG00000011234) #19 CFAP61 (ENSSHAG00000013786) #21 ENSSHAG00000030457 #22 ENSSHAG00000022346 #23 ENSSHAG00000027541 #22 ENSSHAG00000025214 #23 RIN2 (ENSSHAG00000014834) #24 SLC24A3 (ENSSHAG00000015606) #25 SCP2D1 (ENSSHAG00000017843) DTD1 (ENSSHAG00000028090) #26 SEC23B (ENSSHAG00000018083) #28 RBBP9 (ENSSHAG00000023516) #29 POLR3F (ENSSHAG00000018160) #30 DZANK1 (ENSSHAG00000018171) #31 KAT14 (ENSSHAG00000018332) #33 OVOL2 (ENSSHAG00000018466) #34 MGME1 (ENSSHAG00000018526) #35 SNX5 (ENSSHAG00000018544) #36 ENSSHAG00000024157 #37 ENSSHAG00000027906 Opossum MODERN SPECIES ENSMODG00000023139 #10 SSTR4 (ENSMODG00000023138) #11 FOXA2 (ENSMODG00000006213) #12 PAX1 (ENSMODG00000006198) #13 NKX2-2 (ENSMODG00000006177) #14 NKX2-4 (ENSMODG00000006170) #15 XRN2 (ENSMODG00000006163) #16 ENSMODG00000040034 KIZ (ENSMODG00000006125) #18 ENSMODG00000006089 #19 ENSMODG00000036552 ENSMODG00000050875 ENSMODG00000043419 #19 INSM1 (ENSMODG00000006031) #20 CFAP61 (ENSMODG00000005981) #21 ENSMODG00000005961 #22 NAA20 (ENSMODG00000005931) #23 ENSMODG00000028620 RIN2 (ENSMODG00000005916) #24 SLC24A3 (ENSMODG00000005890) #25 ENSMODG00000042009 DTD1 (ENSMODG00000005696) #26 SEC23B (ENSMODG00000005687) #28 RBBP9 (ENSMODG00000005642) #29 ENSMODG00000005624 #30 DZANK1 (ENSMODG00000005606) #31 ENSMODG00000048005 KAT14 (ENSMODG00000005543) #33 PET117 (ENSMODG00000048522) #32 OVOL2 (ENSMODG00000005504) #34 MGME1 (ENSMODG00000005495) #35 Marsupialia ANCESTRAL SPECIES ENSGT00550000074931.h #22 Marsupialia_b ANCESTRAL SPECIES ENSGT00550000074931.h #22 Diprotodontia ANCESTRAL SPECIES ENSGT00550000074931.h #22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00550000074931.h #22 Common wonbat MODERN SPECIES 52 ENSVURG00010003984 OAS2 (ENSVURG00010004508) DTX1 (ENSVURG00010004519) RASAL1 (ENSVURG00010004535) ENSVURG00010004581 DDX54 (ENSVURG00010004607) RITA1 (ENSVURG00010004656) IQCD (ENSVURG00010004666) TPCN1 (ENSVURG00010004683) SLC8B1 (ENSVURG00010004734) PLBD2 (ENSVURG00010004764) SDS (ENSVURG00010004779) SDSL (ENSVURG00010004791) LHX5 (ENSVURG00010004820) ENSVURG00010004851 ENSVURG00010004879 #22 TBX5 (ENSVURG00010004906) ENSVURG00010004916 TBX3 (ENSVURG00010004928) MED13L (ENSVURG00010004979) SPRING1 (ENSVURG00010005068) RNFT2 (ENSVURG00010005083) HRK (ENSVURG00010005111) FBXW8 (ENSVURG00010005132) TESC (ENSVURG00010005485) ENSVURG00010005511 FBXO21 (ENSVURG00010005525) NOS1 (ENSVURG00010005542) KSR2 (ENSVURG00010005627) ENSVURG00010005984 ENSVURG00010005989 Wallaby MODERN SPECIES 10095 U2AF2 (ENSMEUG00000002346) ENSMEUG00000002361 #22 Opossum MODERN SPECIES 7 ENSMODG00000010759 CDK6 (ENSMODG00000010772) ENSMODG00000036822 SUSD5 (ENSMODG00000025477) CRTAP (ENSMODG00000010792) ENSMODG00000039172 GLB1 (ENSMODG00000010812) CCR4 (ENSMODG00000010830) CX3CR1 (ENSMODG00000010797) ENSMODG00000037704 ENSMODG00000010836 ENSMODG00000010840 ENSMODG00000010847 ENSMODG00000049076 ENSMODG00000037587 ENSMODG00000010857 #22 SLC25A38 (ENSMODG00000046685) ENSMODG00000010882 ENSMODG00000010967 TMC2 (ENSMODG00000010987) ENSMODG00000044548 ENSMODG00000024045 ENSMODG00000024043 ENSMODG00000048255 MYRIP (ENSMODG00000011047) ENSMODG00000043014 EIF1B (ENSMODG00000002449) CCK (ENSMODG00000011062) TRAK1 (ENSMODG00000011111) ULK4 (ENSMODG00000011134) CTNNB1 (ENSMODG00000011192) Platypus MODERN SPECIES ENSOANG00000045902 GZF1 (ENSOANG00000038746) #7 ENSOANG00000022376 #7 ENSOANG00000041257 #9 ENSOANG00000015171 SSTR4 (ENSOANG00000037977) #11 FOXA2 (ENSOANG00000015108) #12 PAX1 (ENSOANG00000002008) #13 ENSOANG00000047729 #14 NKX2-4 (ENSOANG00000048651) #15 XRN2 (ENSOANG00000015673) #16 ENSOANG00000002851 #18 RALGAPA2 (ENSOANG00000002499) #19 INSM1 (ENSOANG00000038669) #20 CFAP61 (ENSOANG00000046492) #21 CRNKL1 (ENSOANG00000031667) #22 NAA20 (ENSOANG00000036301) #23 RIN2 (ENSOANG00000002281) #24 SLC24A3 (ENSOANG00000015699) #25 SCP2D1 (ENSOANG00000003673) DTD1 (ENSOANG00000038993) #26 ENSOANG00000039827 #27 SEC23B (ENSOANG00000008750) #28 ENSOANG00000020618 MTLN (ENSOANG00000050517) ENSOANG00000021949 SLC19A3 (ENSOANG00000001882) ENSOANG00000019728 ENSOANG00000005451 DAW1 (ENSOANG00000012144) EIF2A (ENSOANG00000005785) Sauria ANCESTRAL SPECIES 1 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 ENSGT00940000162003 #37 Lepidosauria ANCESTRAL SPECIES 123 ENSGT00940000156996 #9 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247.b #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00950000183147.B Episquamata ANCESTRAL SPECIES 1 ENSGT00390000014771.a ENSGT00550000074988 ENSGT00940000154755 ENSGT00940000164218 ENSGT00940000156996 #9 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247.b #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00950000183147.B ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT00390000018549 ENSGT00390000000973.a.b ENSGT01030000235467 Laterata ANCESTRAL SPECIES 5 ENSGT00940000158036 ENSGT00390000014771.a ENSGT00550000074988 ENSGT00940000154755 ENSGT00940000164218 ENSGT00940000166261.a ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247.b #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00950000183147.B ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT00390000018549 ENSGT00390000000973.a.b ENSGT01030000235467 Common wall lizard MODERN SPECIES 15 ENSPMRG00000020132 ATPSCKMT (ENSPMRG00000020115) CCT5 (ENSPMRG00000020104) CST3 (ENSPMRG00000020097) ENSPMRG00000020082 ENSPMRG00000020069 FOXA2 (ENSPMRG00000020065) #12 PAX1 (ENSPMRG00000020057) #13 NKX2-2 (ENSPMRG00000020050) #14 ENSPMRG00000020042 #15 ENSPMRG00000020038 XRN2 (ENSPMRG00000020016) #16 KIZ (ENSPMRG00000020002) #18 RALGAPA2 (ENSPMRG00000019950) #19 CFAP61 (ENSPMRG00000019900) #21 CRNKL1 (ENSPMRG00000019875) #22 NAA20 (ENSPMRG00000019868) #23 RIN2 (ENSPMRG00000019862) #24 SLC24A3 (ENSPMRG00000019844) #25 DTD1 (ENSPMRG00000019836) #26 SEC23B (ENSPMRG00000019825) #28 SYNDIG1 (ENSPMRG00000019820) AFAP1 (ENSPMRG00000019806) SORCS2 (ENSPMRG00000019764) ENSPMRG00000019752 GRPEL1 (ENSPMRG00000019746) TADA2B (ENSPMRG00000019737) ENSPMRG00000019725 KIAA0232 (ENSPMRG00000019692) FAM193A (ENSPMRG00000019547) ENSPMRG00000019516 Argentine black and white tegu MODERN SPECIES 36 CCT5 (ENSSMRG00000016206) ENSSMRG00000016209 CST3 (ENSSMRG00000016211) ENSSMRG00000016212 ENSSMRG00000016213 FOXA2 (ENSSMRG00000016214) #12 PAX1 (ENSSMRG00000016215) #13 NKX2-2 (ENSSMRG00000016217) #14 NKX2-4 (ENSSMRG00000016219) #15 XRN2 (ENSSMRG00000016220) #16 KIZ (ENSSMRG00000017056) #18 ENSSMRG00000017072 RALGAPA2 (ENSSMRG00000017087) #19 ENSSMRG00000018136 CFAP61 (ENSSMRG00000018138) #21 CRNKL1 (ENSSMRG00000018141) #22 NAA20 (ENSSMRG00000018142) #23 RIN2 (ENSSMRG00000018143) #24 SLC24A3 (ENSSMRG00000018144) #25 SCP2D1 (ENSSMRG00000018145) DTD1 (ENSSMRG00000018146) #26 SEC23B (ENSSMRG00000018147) #28 SYNDIG1 (ENSSMRG00000018148) AFAP1 (ENSSMRG00000018150) SORCS2 (ENSSMRG00000018152) GRPEL1 (ENSSMRG00000018154) TADA2B (ENSSMRG00000018155) ENSSMRG00000018156 KIAA0232 (ENSSMRG00000018157) ENSSMRG00000018159 FAM193A (ENSSMRG00000018161) Toxicofera ANCESTRAL SPECIES 1 ENSGT00390000014771.a.h ENSGT00550000074988 ENSGT00940000154755 ENSGT00940000167312 ENSGT00940000156996 #9 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247.b #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00950000183147.B ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT00390000018549 ENSGT00390000000973.a.b ENSGT01030000235467 Elapidae ANCESTRAL SPECIES 8 ENSGT00940000158036 ENSGT00390000014771.a.h ENSGT00550000074988 ENSGT00940000154755 ENSGT00940000167312 ENSGT00940000156996 #9 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247.b #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b.i #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00950000183147.B ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT00390000018549 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.b Elapidae_a ANCESTRAL SPECIES 35 ENSGT00940000155822 ENSGT00940000158036 ENSGT00390000014771.a.h ENSGT00550000074988 ENSGT00940000154755 ENSGT00940000167312 ENSGT00940000156996 #9 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247.b #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b.i #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00950000183147.B ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT00390000018549 ENSGT00940000153169.A.b.a ENSGT00940000154108.a ENSGT00940000159674.b Acanthophiinae ANCESTRAL SPECIES 35 ENSGT01030000234607.A.a.a.a ENSGT00940000155822 ENSGT00940000158036 ENSGT00390000014771.a.h ENSGT00550000074988 ENSGT00940000154755 ENSGT00940000167312 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247.b #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b.i #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00990000214234 ENSGT00390000006916.c #28 ENSGT00950000183147.B ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT00390000018549 ENSGT00940000153169.A.b.a ENSGT00940000154108.a Mainland tiger snake MODERN SPECIES 45 MTRR (ENSNSUG00000010692) SEMA5A (ENSNSUG00000010721) ATPSCKMT (ENSNSUG00000010722) CCT5 (ENSNSUG00000010732) ENSNSUG00000010733 ENSNSUG00000010734 ENSNSUG00000010735 FOXA2 (ENSNSUG00000010738) #12 PAX1 (ENSNSUG00000010743) #13 NKX2-2 (ENSNSUG00000010747) #14 NKX2-4 (ENSNSUG00000010748) #15 XRN2 (ENSNSUG00000010749) #16 ENSNSUG00000010754 #18 ENSNSUG00000010764 #19 CFAP61 (ENSNSUG00000010774) #21 CRNKL1 (ENSNSUG00000010801) #22 RIN2 (ENSNSUG00000010814) #24 SLC24A3 (ENSNSUG00000010817) #25 ENSNSUG00000010819 SCP2D1 (ENSNSUG00000010820) DTD1 (ENSNSUG00000010823) #26 ENSNSUG00000010825 SEC23B (ENSNSUG00000010828) #28 SYNDIG1 (ENSNSUG00000010850) AFAP1 (ENSNSUG00000010854) SORCS2 (ENSNSUG00000010855) ENSNSUG00000010858 TADA2B (ENSNSUG00000010860) ENSNSUG00000010861 KIAA0232 (ENSNSUG00000010863) UBE2D2 (ENSNSUG00000010864) Eastern brown snake MODERN SPECIES 15 CFAP90 (ENSPTXG00000003856) FASTKD3 (ENSPTXG00000003854) MTRR (ENSPTXG00000003852) SEMA5A (ENSPTXG00000003851) ATPSCKMT (ENSPTXG00000003849) CCT5 (ENSPTXG00000003847) ENSPTXG00000003846 ENSPTXG00000003845 FOXA2 (ENSPTXG00000003844) #12 PAX1 (ENSPTXG00000003840) #13 NKX2-2 (ENSPTXG00000003839) #14 NKX2-4 (ENSPTXG00000003838) #15 XRN2 (ENSPTXG00000003835) #16 RALGAPA2 (ENSPTXG00000003831) #19 CFAP61 (ENSPTXG00000003415) #21 CRNKL1 (ENSPTXG00000003383) #22 RIN2 (ENSPTXG00000003382) #24 SLC24A3 (ENSPTXG00000003380) #25 ENSPTXG00000003379 SCP2D1 (ENSPTXG00000003378) DTD1 (ENSPTXG00000003377) #26 ENSPTXG00000003375 SEC23B (ENSPTXG00000003374) #28 SYNDIG1 (ENSPTXG00000003373) AFAP1 (ENSPTXG00000003371) SORCS2 (ENSPTXG00000003364) GRPEL1 (ENSPTXG00000003361) TADA2B (ENSPTXG00000003359) ENSPTXG00000003357 KIAA0232 (ENSPTXG00000003351) UBE2D2 (ENSPTXG00000003350) Blue-lipped sea krait MODERN SPECIES 9028 CRNKL1 (ENSLLTG00000005058) #22 ENSLLTG00000005106 #24 Indian cobra MODERN SPECIES 2 SEMA5A (ENSNNAG00000012300) ENSNNAG00000012269 CCT5 (ENSNNAG00000012242) ENSNNAG00000012223 ENSNNAG00000012207 ENSNNAG00000012195 #9 FOXA2 (ENSNNAG00000012180) #12 PAX1 (ENSNNAG00000012128) #13 ENSNNAG00000012106 NKX2-2 (ENSNNAG00000012093) #14 NKX2-4 (ENSNNAG00000012057) #15 XRN2 (ENSNNAG00000011585) #16 RALGAPA2 (ENSNNAG00000010761) #19 CFAP61 (ENSNNAG00000010625) #21 ENSNNAG00000010579 CRNKL1 (ENSNNAG00000010521) #22 RIN2 (ENSNNAG00000010471) #24 SLC24A3 (ENSNNAG00000010197) #25 SCP2D1 (ENSNNAG00000010155) DTD1 (ENSNNAG00000010119) #26 SEC23B (ENSNNAG00000010054) #28 SYNDIG1 (ENSNNAG00000010041) AFAP1 (ENSNNAG00000009998) SORCS2 (ENSNNAG00000009900) GRPEL1 (ENSNNAG00000009878) TADA2B (ENSNNAG00000009866) ENSNNAG00000009851 KIAA0232 (ENSNNAG00000009728) UBE2D2 (ENSNNAG00000009637) CXXC5 (ENSNNAG00000009581) ENSNNAG00000009542 Lizard MODERN SPECIES 3 ENSACAG00000010474 ENSACAG00000041598 CCT5 (ENSACAG00000010488) ENSACAG00000021112 ENSACAG00000023847 ENSACAG00000043135 FOXA2 (ENSACAG00000012163) #12 PAX1 (ENSACAG00000010563) #13 NKX2-2 (ENSACAG00000005697) #14 XRN2 (ENSACAG00000005565) #16 KIZ (ENSACAG00000028994) #18 ENSACAG00000029173 RALGAPA2 (ENSACAG00000005439) #19 CFAP61 (ENSACAG00000005383) #21 ENSACAG00000042716 CRNKL1 (ENSACAG00000005284) #22 NAA20 (ENSACAG00000005272) #23 RIN2 (ENSACAG00000005226) #24 ENSACAG00000041292 ENSACAG00000042539 SLC24A3 (ENSACAG00000005176) #25 SCP2D1 (ENSACAG00000045395) DTD1 (ENSACAG00000007143) #26 SEC23B (ENSACAG00000007168) #28 ENSACAG00000001510 AFAP1 (ENSACAG00000001533) ENSACAG00000003928 SORCS2 (ENSACAG00000001646) GRPEL1 (ENSACAG00000002048) TADA2B (ENSACAG00000002074) ENSACAG00000002076 tuatara MODERN SPECIES 1774 PAX1 (ENSSPUG00000005561) #13 NKX2-2 (ENSSPUG00000005539) #14 NKX2-4 (ENSSPUG00000005535) #15 XRN2 (ENSSPUG00000005485) #16 ENSSPUG00000005474 #18 ENSSPUG00000005471 #18 ENSSPUG00000005462 ENSSPUG00000005413 #19 ENSSPUG00000005392 ENSSPUG00000005379 #19 ENSSPUG00000005371 ENSSPUG00000005359 #19 INSM1 (ENSSPUG00000005332) #20 CFAP61 (ENSSPUG00000005289) #21 CRNKL1 (ENSSPUG00000005254) #22 NAA20 (ENSSPUG00000005245) #23 Archelosauria ANCESTRAL SPECIES 1 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00510000047537 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Archosauria ANCESTRAL SPECIES 45 ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00510000047537 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Aves ANCESTRAL SPECIES 56 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 Neognathae ANCESTRAL SPECIES 32 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 ENSGT00550000075046 #23 Neognathae_b ANCESTRAL SPECIES 32 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 ENSGT00550000075046 #23 Passeriformes ANCESTRAL SPECIES 31 ENSGT00940000157396 ENSGT01030000234543.E ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 Great tit MODERN SPECIES 22 ZC3H6 (ENSPMJG00000013843) ENSPMJG00000013842 NAPB (ENSPMJG00000013758) GZF1 (ENSPMJG00000013756) #7 ENSPMJG00000013755 #7 CD93 (ENSPMJG00000013751) #9 ENSPMJG00000013748 SSTR4 (ENSPMJG00000013747) #11 FOXA2 (ENSPMJG00000013745) #12 PAX1 (ENSPMJG00000013744) #13 ENSPMJG00000013730 XRN2 (ENSPMJG00000013729) #16 RALGAPA2 (ENSPMJG00000013536) #19 INSM1 (ENSPMJG00000013534) #20 CFAP61 (ENSPMJG00000013533) #21 CRNKL1 (ENSPMJG00000013532) #22 SLC24A3 (ENSPMJG00000013508) #25 RIN2 (ENSPMJG00000013504) #24 KCNK16 (ENSPMJG00000013502) ENSPMJG00000013501 Passeriformes_d ANCESTRAL SPECIES 32 ENSGT00390000016757 ENSGT00940000155669 ENSGT00830000128368.a ENSGT00940000157396 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 Flycatcher MODERN SPECIES 256 XRN2 (ENSFALG00000004508) #16 ENSFALG00000025601 RALGAPA2 (ENSFALG00000004564) #19 ENSFALG00000028074 ENSFALG00000023154 CFAP61 (ENSFALG00000004604) #21 CRNKL1 (ENSFALG00000004611) #22 ENSFALG00000004615 #25 ENSFALG00000004619 #24 URB1 (ENSFALG00000004636) EVA1C (ENSFALG00000004661) CFAP298 (ENSFALG00000004671) SYNJ1 (ENSFALG00000004680) ENSFALG00000004690 ENSFALG00000004708 ENSFALG00000023155 PGM2L1 (ENSFALG00000004747) ENSFALG00000027624 ENSFALG00000004761 CHRDL2 (ENSFALG00000004788) RNF169 (ENSFALG00000024176) SPCS2 (ENSFALG00000026863) Passeriformes_g ANCESTRAL SPECIES 37 ENSGT00940000155669 ENSGT00830000128368.a ENSGT00940000157396 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00960000189741 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 Passeroidea ANCESTRAL SPECIES 34 ENSGT00940000155669 ENSGT00830000128368.a ENSGT00940000157396 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00960000189741 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 Common canary MODERN SPECIES 23 ANAPC1 (ENSSCAG00000014551) MERTK (ENSSCAG00000014622) ENSSCAG00000014715 ZC3H6 (ENSSCAG00000014725) NAPB (ENSSCAG00000014737) GZF1 (ENSSCAG00000014750) #7 ENSSCAG00000014757 #7 ENSSCAG00000014764 #9 SSTR4 (ENSSCAG00000014767) #11 FOXA2 (ENSSCAG00000014772) #12 PAX1 (ENSSCAG00000014782) #13 XRN2 (ENSSCAG00000014793) #16 ENSSCAG00000014807 RALGAPA2 (ENSSCAG00000014824) #19 CFAP61 (ENSSCAG00000014845) #21 CRNKL1 (ENSSCAG00000014865) #22 SLC24A3 (ENSSCAG00000014909) #25 RIN2 (ENSSCAG00000014970) #24 BTBD3 (ENSSCAG00000014984) ENSSCAG00000014990 SPTLC3 (ENSSCAG00000014993) ISM1 (ENSSCAG00000015000) TASP1 (ENSSCAG00000015009) ESF1 (ENSSCAG00000015014) NDUFAF5 (ENSSCAG00000015020) ENSSCAG00000015029 FLRT3 (ENSSCAG00000015035) ENSSCAG00000015043 KIF16B (ENSSCAG00000015062) CAPN2 (ENSSCAG00000015110) TP53BP2 (ENSSCAG00000015158) Zebra finch MODERN SPECIES 23 ANAPC1 (ENSTGUG00000007360) MERTK (ENSTGUG00000007420) FBLN7 (ENSTGUG00000007459) ZC3H6 (ENSTGUG00000007468) NAPB (ENSTGUG00000007487) GZF1 (ENSTGUG00000007503) #7 CD93 (ENSTGUG00000007522) #9 SSTR4 (ENSTGUG00000027392) #11 FOXA2 (ENSTGUG00000007523) #12 PAX1 (ENSTGUG00000007526) #13 NKX2-2 (ENSTGUG00000007528) #14 NKX2-4 (ENSTGUG00000007530) #15 XRN2 (ENSTGUG00000007535) #16 RALGAPA2 (ENSTGUG00000007590) #19 CFAP61 (ENSTGUG00000007628) #21 CRNKL1 (ENSTGUG00000007645) #22 SLC24A3 (ENSTGUG00000007669) #25 RIN2 (ENSTGUG00000007689) #24 KCNK16 (ENSTGUG00000007716) KCNK17 (ENSTGUG00000029644) KCNK5 (ENSTGUG00000007722) SAYSD1 (ENSTGUG00000021592) GLP1R (ENSTGUG00000007730) DNAH8 (ENSTGUG00000007770) GLO1 (ENSTGUG00000007808) BTBD9 (ENSTGUG00000007817) ZFAND3 (ENSTGUG00000025476) MDGA1 (ENSTGUG00000007851) CCDC167 (ENSTGUG00000007918) CMTR1 (ENSTGUG00000007924) RNF8 (ENSTGUG00000018486) Medium ground finch MODERN SPECIES 44 NPHP1 (ENSGFOG00000005949) ENSGFOG00000005968 ENSGFOG00000005983 ENSGFOG00000005998 ANAPC1 (ENSGFOG00000006044) MERTK (ENSGFOG00000006791) FBLN7 (ENSGFOG00000006975) ZC3H6 (ENSGFOG00000006988) NAPB (ENSGFOG00000006999) GZF1 (ENSGFOG00000007020) #7 ENSGFOG00000007043 #7 XRN2 (ENSGFOG00000007052) #16 ENSGFOG00000007082 RALGAPA2 (ENSGFOG00000007113) #19 ENSGFOG00000007351 #21 CRNKL1 (ENSGFOG00000007370) #22 SLC24A3 (ENSGFOG00000007380) #25 RIN2 (ENSGFOG00000007425) #24 ACSS1 (ENSGFOG00000007459) TTBK1 (ENSGFOG00000008055) SLC22A7 (ENSGFOG00000008109) ENSGFOG00000008869 POLR1B (ENSGFOG00000008883) CNPY3 (ENSGFOG00000008920) PEX6 (ENSGFOG00000008941) VSX1 (ENSGFOG00000009009) ENTPD6 (ENSGFOG00000009015) PYGB (ENSGFOG00000009112) ABHD12 (ENSGFOG00000011545) PPP2R5D (ENSGFOG00000011602) KLHDC3 (ENSGFOG00000012571) Neognathae_c ANCESTRAL SPECIES 35 ENSGT00940000157396 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 ENSGT00550000075046 #23 Kakapo MODERN SPECIES 23 NAPB (ENSSHBG00005004226) GZF1 (ENSSHBG00005004233) #7 ENSSHBG00005004244 #7 CD93 (ENSSHBG00005004250) #9 ENSSHBG00005004256 SSTR4 (ENSSHBG00005004259) #11 FOXA2 (ENSSHBG00005004262) #12 PAX1 (ENSSHBG00005004267) #13 NKX2-2 (ENSSHBG00005004272) #14 NKX2-4 (ENSSHBG00005004276) #15 XRN2 (ENSSHBG00005004281) #16 KIZ (ENSSHBG00005004290) #18 RALGAPA2 (ENSSHBG00005004387) #19 CFAP61 (ENSSHBG00005004844) #21 ENSSHBG00005004852 CRNKL1 (ENSSHBG00005004860) #22 SLC24A3 (ENSSHBG00005004870) #25 RIN2 (ENSSHBG00005004874) #24 Golden eagle MODERN SPECIES 24 ENSACCG00020005936 NAPB (ENSACCG00020005953) GZF1 (ENSACCG00020005972) #7 ENSACCG00020005987 #7 CD93 (ENSACCG00020006004) #9 ENSACCG00020006015 SSTR4 (ENSACCG00020006025) #11 FOXA2 (ENSACCG00020006036) #12 PAX1 (ENSACCG00020006045) #13 NKX2-2 (ENSACCG00020006058) #14 NKX2-4 (ENSACCG00020006068) #15 XRN2 (ENSACCG00020006117) #16 KIZ (ENSACCG00020006182) #18 RALGAPA2 (ENSACCG00020006230) #19 CFAP61 (ENSACCG00020006273) #21 CRNKL1 (ENSACCG00020006304) #22 SLC24A3 (ENSACCG00020006342) #25 RIN2 (ENSACCG00020006417) #24 NAA20 (ENSACCG00020006429) #23 C2CD2L (ENSACCG00020006443) DPAGT1 (ENSACCG00020006457) H2AX (ENSACCG00020006466) HMBS (ENSACCG00020006483) VPS11 (ENSACCG00020006501) DDX6 (ENSACCG00020006520) CXCR5 (ENSACCG00020006534) BCL9L (ENSACCG00020006552) ENSACCG00020006572 CENATAC (ENSACCG00020006587) RPS25 (ENSACCG00020006607) TRAPPC4 (ENSACCG00020006620) Galloanserae ANCESTRAL SPECIES 29 ENSGT01030000234543.E ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 Anatidae ANCESTRAL SPECIES 45 ENSGT00940000157396 ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 Duck MODERN SPECIES 21 ENSAPLG00000019080 ENSAPLG00000027404 ENSAPLG00000014287 NAPB (ENSAPLG00000014476) GZF1 (ENSAPLG00000027566) #7 CD93 (ENSAPLG00000025359) #9 ENSAPLG00000019427 SSTR4 (ENSAPLG00000019606) #11 FOXA2 (ENSAPLG00000024325) #12 PAX1 (ENSAPLG00000021065) #13 XRN2 (ENSAPLG00000013869) #16 KIZ (ENSAPLG00000013782) #18 RALGAPA2 (ENSAPLG00000013547) #19 ENSAPLG00000029177 CFAP61 (ENSAPLG00000013456) #21 CRNKL1 (ENSAPLG00000013105) #22 ENSAPLG00000024100 RIN2 (ENSAPLG00000014865) #24 APLF (ENSAPLG00000009117) PLEK (ENSAPLG00000009140) CNRIP1 (ENSAPLG00000022779) PPP3R1 (ENSAPLG00000023228) PNO1 (ENSAPLG00000029102) DNAAF10 (ENSAPLG00000029023) C1D (ENSAPLG00000009320) ENSAPLG00000025999 MEIS1 (ENSAPLG00000009141) SPRED2 (ENSAPLG00000009387) ACTR2 (ENSAPLG00000009440) RAB1A (ENSAPLG00000018342) CEP68 (ENSAPLG00000016942) Pink-footed goose MODERN SPECIES 117 ZC3H6 (ENSABRG00000011566) NAPB (ENSABRG00000011550) GZF1 (ENSABRG00000011534) #7 CD93 (ENSABRG00000011523) #9 ENSABRG00000011520 SSTR4 (ENSABRG00000011516) #11 FOXA2 (ENSABRG00000011501) #12 PAX1 (ENSABRG00000011485) #13 NKX2-2 (ENSABRG00000011480) #14 NKX2-4 (ENSABRG00000011475) #15 XRN2 (ENSABRG00000011465) #16 ENSABRG00000011461 #18 RALGAPA2 (ENSABRG00000007031) #19 INSM1 (ENSABRG00000006785) #20 CFAP61 (ENSABRG00000006636) #21 CRNKL1 (ENSABRG00000006550) #22 SLC24A3 (ENSABRG00000006519) #25 RIN2 (ENSABRG00000006510) #24 Phasianidae ANCESTRAL SPECIES 29 ENSGT01030000234543.E ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 ENSGT00950000183148.b.b ENSGT00940000160517 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064165.b ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153954.d ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 Japanese quail MODERN SPECIES 21 ZC3H6 (ENSCJPG00005015830) NAPB (ENSCJPG00005015828) GZF1 (ENSCJPG00005015826) #7 ENSCJPG00005015825 #7 CD93 (ENSCJPG00005015799) #9 ENSCJPG00005015797 SSTR4 (ENSCJPG00005015795) #11 FOXA2 (ENSCJPG00005015793) #12 ENSCJPG00005015788 #14 NKX2-4 (ENSCJPG00005015785) #15 XRN2 (ENSCJPG00005015783) #16 KIZ (ENSCJPG00005015757) #18 RALGAPA2 (ENSCJPG00005015594) #19 INSM1 (ENSCJPG00005015593) #20 CFAP61 (ENSCJPG00005015592) #21 CRNKL1 (ENSCJPG00005015591) #22 SLC24A3 (ENSCJPG00005015590) #25 RIN2 (ENSCJPG00005015589) #24 PYGB (ENSCJPG00005015588) ABHD12 (ENSCJPG00005015587) MEA1 (ENSCJPG00005015586) PPP2R5D (ENSCJPG00005015454) ENSCJPG00005015450 KLHDC3 (ENSCJPG00005015449) ENSCJPG00005015448 ENSCJPG00005015447 ENSCJPG00005015443 MRPL2 (ENSCJPG00005015441) ENSCJPG00005015284 ENSCJPG00005015277 PTK7 (ENSCJPG00005015274) Phasianidae_b ANCESTRAL SPECIES 28 ENSGT01030000234543.E ENSGT00390000005826.a.b ENSGT00870000136554 #7 ENSGT00940000156996 #9 ENSGT00940000166261 ENSGT00940000156819.a.a #11 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154866.B #24 ENSGT00950000183148.b.b ENSGT00940000160517 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00940000157952 ENSGT00530000064165.b ENSGT00390000003866.a.a ENSGT00950000183209.b.a.a ENSGT00940000153954.d ENSGT00940000153244.A ENSGT00940000164764 ENSGT00940000165109 ENSGT00940000157908 Chicken MODERN SPECIES 22 NAPB (ENSGALG00010018019) ENSGALG00010018028 GZF1 (ENSGALG00010018037) #7 CD248 (ENSGALG00010019399) #9 SSTR4 (ENSGALG00010018057) #11 ENSGALG00010018067 FOXA2 (ENSGALG00010018076) #12 PAX1 (ENSGALG00010018083) #13 NKX2-2 (ENSGALG00010018111) #14 NKX2-4 (ENSGALG00010018125) #15 XRN2 (ENSGALG00010018148) #16 KIZ (ENSGALG00010018206) #18 RALGAPA2 (ENSGALG00010018241) #19 CFAP61 (ENSGALG00010018264) #21 INSM1 (ENSGALG00010018279) #20 CRNKL1 (ENSGALG00010018288) #22 SLC24A3 (ENSGALG00010018314) #25 RIN2 (ENSGALG00010018351) #24 PYGB (ENSGALG00010018376) ABHD12 (ENSGALG00010018399) PPP2R5D (ENSGALG00010018428) MEA1 (ENSGALG00010018440) KLHDC3 (ENSGALG00010018448) ENSGALG00010018476 ENSGALG00010018492 ENSGALG00010018509 ENSGALG00010018520 MRPL2 (ENSGALG00010018556) ENSGALG00010018560 ENSGALG00010018566 PTK7 (ENSGALG00010018576) Turkey MODERN SPECIES 11 ENSMGAG00000001741 ENSMGAG00000017856 ENSMGAG00000019858 ENSMGAG00000001721 ENSMGAG00000001683 PEX13 (ENSMGAG00000001669) ENSMGAG00000022332 ENSMGAG00000001641 ENSMGAG00000001527 ENSMGAG00000001569 ENSMGAG00000001496 ENSMGAG00000001494 ENSMGAG00000021790 RALGAPA2 (ENSMGAG00000003311) #19 ENSMGAG00000003401 #21 CRNKL1 (ENSMGAG00000003452) #22 ENSMGAG00000003494 #25 ENSMGAG00000003527 #24 ENSMGAG00000003550 ENSMGAG00000003608 PPP2R5D (ENSMGAG00000003651) KLHDC3 (ENSMGAG00000003684) ENSMGAG00000021090 ENSMGAG00000015893 MRPL2 (ENSMGAG00000003797) ENSMGAG00000003740 ENSMGAG00000017248 ENSMGAG00000003811 ENSMGAG00000020847 PTK7 (ENSMGAG00000003883) SRF (ENSMGAG00000003946) African ostrich MODERN SPECIES 545 KAT14 (ENSSCUG00000006639) #33 DZANK1 (ENSSCUG00000006625) #31 POLR3F (ENSSCUG00000006621) #30 ENSSCUG00000006620 SEC23B (ENSSCUG00000006617) #28 DTD1 (ENSSCUG00000006614) #26 ENSSCUG00000006610 GZF1 (ENSSCUG00000006591) #7 ENSSCUG00000006588 #7 SSTR4 (ENSSCUG00000006582) #11 FOXA2 (ENSSCUG00000006579) #12 XRN2 (ENSSCUG00000006554) #16 KIZ (ENSSCUG00000006545) #18 RALGAPA2 (ENSSCUG00000006518) #19 CFAP61 (ENSSCUG00000006472) #21 CRNKL1 (ENSSCUG00000006462) #22 NAA20 (ENSSCUG00000006449) #23 RIN2 (ENSSCUG00000006447) #24 SLC24A3 (ENSSCUG00000006435) #25 Australian saltwater crocodile MODERN SPECIES 49 ENSCPRG00005011030 ENSCPRG00005011023 SSTR4 (ENSCPRG00005011021) #11 FOXA2 (ENSCPRG00005011011) #12 PAX1 (ENSCPRG00005011002) #13 NKX2-2 (ENSCPRG00005010983) #14 ENSCPRG00005010979 ENSCPRG00005010975 #15 ENSCPRG00005010970 #15 XRN2 (ENSCPRG00005010683) #16 KIZ (ENSCPRG00005010629) #18 ENSCPRG00005010578 ENSCPRG00005010575 RALGAPA2 (ENSCPRG00005010555) #19 CFAP61 (ENSCPRG00005010399) #21 CRNKL1 (ENSCPRG00005010333) #22 NAA20 (ENSCPRG00005010325) #23 RIN2 (ENSCPRG00005010315) #24 SLC24A3 (ENSCPRG00005010233) #25 SCP2D1 (ENSCPRG00005010201) DTD1 (ENSCPRG00005010193) #26 SEC23B (ENSCPRG00005010179) #28 RBBP9 (ENSCPRG00005010177) #29 POLR3F (ENSCPRG00005010171) #30 ENSCPRG00005010167 #31 ENSCPRG00005010153 #31 BIRC5 (ENSCPRG00005010149) KAT14 (ENSCPRG00005010142) #33 OVOL2 (ENSCPRG00005010125) #34 MGME1 (ENSCPRG00005010120) #35 SNX5 (ENSCPRG00005010114) #36 Cryptodira ANCESTRAL SPECIES 44 ENSGT00390000007551 ENSGT00390000007701 ENSGT00940000161444 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00510000047537 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Testudinoidea ANCESTRAL SPECIES ENSGT00390000007551 ENSGT00390000007701 ENSGT00940000161444 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00510000047537 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Emydidae ANCESTRAL SPECIES 41 ENSGT00390000015299.a.b.b.b ENSGT00940000162755 ENSGT00390000007551 ENSGT00390000007701 ENSGT00940000161444 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00510000047537 ENSGT00390000001146 #33 ENSGT00960000189392 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Three-toed box turtle MODERN SPECIES 62 ENSTMTG00000012974 MTLN (ENSTMTG00000012999) ENSTMTG00000013008 NPHP1 (ENSTMTG00000013032) MALL (ENSTMTG00000013173) FOXA2 (ENSTMTG00000013199) #12 PAX1 (ENSTMTG00000013220) #13 NKX2-2 (ENSTMTG00000013238) #14 NKX2-4 (ENSTMTG00000013245) #15 XRN2 (ENSTMTG00000013258) #16 KIZ (ENSTMTG00000013304) #18 ENSTMTG00000013351 RALGAPA2 (ENSTMTG00000013368) #19 INSM1 (ENSTMTG00000013443) #20 CFAP61 (ENSTMTG00000013481) #21 CRNKL1 (ENSTMTG00000013822) #22 NAA20 (ENSTMTG00000013839) #23 RIN2 (ENSTMTG00000013852) #24 SLC24A3 (ENSTMTG00000013883) #25 SCP2D1 (ENSTMTG00000013925) SEC23B (ENSTMTG00000013927) #28 RBBP9 (ENSTMTG00000013948) #29 POLR3F (ENSTMTG00000013956) #30 DZANK1 (ENSTMTG00000013988) #31 BIRC5 (ENSTMTG00000014090) KAT14 (ENSTMTG00000014155) #33 ENSTMTG00000014174 ENSTMTG00000014188 OVOL2 (ENSTMTG00000014204) #34 MGME1 (ENSTMTG00000014212) #35 SNX5 (ENSTMTG00000014229) #36 painted turtle MODERN SPECIES 12 TMEM178A (ENSCPBG00000023565) ENSCPBG00000023559 MTLN (ENSCPBG00000023558) NPHP1 (ENSCPBG00000023552) MALL (ENSCPBG00000023547) FOXA2 (ENSCPBG00000023545) #12 PAX1 (ENSCPBG00000023543) #13 NKX2-2 (ENSCPBG00000023541) #14 NKX2-4 (ENSCPBG00000023539) #15 XRN2 (ENSCPBG00000023533) #16 KIZ (ENSCPBG00000023528) #18 ENSCPBG00000023521 RALGAPA2 (ENSCPBG00000023514) #19 INSM1 (ENSCPBG00000023510) #20 CFAP61 (ENSCPBG00000023506) #21 CRNKL1 (ENSCPBG00000023501) #22 NAA20 (ENSCPBG00000023498) #23 RIN2 (ENSCPBG00000023491) #24 SCP2D1 (ENSCPBG00000023485) DTD1 (ENSCPBG00000023483) #26 SEC23B (ENSCPBG00000023477) #28 RBBP9 (ENSCPBG00000023475) #29 POLR3F (ENSCPBG00000023473) #30 DZANK1 (ENSCPBG00000023469) #31 BIRC5 (ENSCPBG00000023468) KAT14 (ENSCPBG00000023466) #33 OVOL2 (ENSCPBG00000023454) #34 MGME1 (ENSCPBG00000023450) #35 SNX5 (ENSCPBG00000023448) #36 BANF2 (ENSCPBG00000023445) #37 RRBP1 (ENSCPBG00000023436) Testudinidae ANCESTRAL SPECIES 6 ENSGT00940000162755 ENSGT00390000007551 ENSGT00390000007701 ENSGT00940000161444 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT01000000215777 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000154327.b.e.b ENSGT00940000153431.b #26 ENSGT00390000006916.c #28 ENSGT00390000014861 #29 ENSGT00390000009679 #30 ENSGT00390000000549 #31 ENSGT00510000047537 ENSGT00390000001146 #33 ENSGT00520000059926 #32 ENSGT00940000159359 #34 ENSGT00390000003349 #35 ENSGT00940000154632 #36 Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005017333 MTLN (ENSGEVG00005017304) NPHP1 (ENSGEVG00005017269) MALL (ENSGEVG00005017245) FOXA2 (ENSGEVG00005017225) #12 PAX1 (ENSGEVG00005017194) #13 NKX2-2 (ENSGEVG00005017179) #14 NKX2-4 (ENSGEVG00005017157) #15 XRN2 (ENSGEVG00005017099) #16 KIZ (ENSGEVG00005017056) #18 RALGAPA2 (ENSGEVG00005016920) #19 INSM1 (ENSGEVG00005016876) #20 ENSGEVG00005016856 CFAP61 (ENSGEVG00005016813) #21 ENSGEVG00005016799 CRNKL1 (ENSGEVG00005016766) #22 NAA20 (ENSGEVG00005016744) #23 RIN2 (ENSGEVG00005016686) #24 SLC24A3 (ENSGEVG00005016547) #25 SCP2D1 (ENSGEVG00005016532) DTD1 (ENSGEVG00005016506) #26 SEC23B (ENSGEVG00005016472) #28 RBBP9 (ENSGEVG00005016438) #29 POLR3F (ENSGEVG00005016411) #30 DZANK1 (ENSGEVG00005016298) #31 BIRC5 (ENSGEVG00005016248) KAT14 (ENSGEVG00005016139) #33 OVOL2 (ENSGEVG00005016082) #34 MGME1 (ENSGEVG00005016011) #35 SNX5 (ENSGEVG00005015989) #36 BANF2 (ENSGEVG00005015970) #37 Abingdon island giant tortoise MODERN SPECIES 1921 ENSCABG00000007969 #21 ENSCABG00000007966 #21 ENSCABG00000007964 CRNKL1 (ENSCABG00000007960) #22 NAA20 (ENSCABG00000007957) #23 RIN2 (ENSCABG00000007954) #24 SLC24A3 (ENSCABG00000007951) #25 ENSCABG00000007949 SCP2D1 (ENSCABG00000007948) DTD1 (ENSCABG00000007946) #26 SEC23B (ENSCABG00000007945) #28 RBBP9 (ENSCABG00000007944) #29 POLR3F (ENSCABG00000007942) #30 ENSCABG00000007941 #31 ENSCABG00000007937 #31 BIRC5 (ENSCABG00000007923) KAT14 (ENSCABG00000007920) #33 PET117 (ENSCABG00000007917) #32 OVOL2 (ENSCABG00000007915) #34 Chinese turtle MODERN SPECIES 726 ENSPSIG00000012048 #21 CRNKL1 (ENSPSIG00000012705) #22 NAA20 (ENSPSIG00000013482) #23 RIN2 (ENSPSIG00000013623) #24 SLC24A3 (ENSPSIG00000014313) #25 ENSPSIG00000000877 SCP2D1 (ENSPSIG00000000893) DTD1 (ENSPSIG00000014418) #26 SEC23B (ENSPSIG00000014540) #28 RBBP9 (ENSPSIG00000016235) #29 POLR3F (ENSPSIG00000016613) #30 DZANK1 (ENSPSIG00000016664) #31 KAT14 (ENSPSIG00000006752) #33 OVOL2 (ENSPSIG00000006768) #34 MGME1 (ENSPSIG00000007059) #35 SNX5 (ENSPSIG00000007159) #36 DSTN (ENSPSIG00000009125) Anura ANCESTRAL SPECIES 116 ENSGT00940000157679 ENSGT00940000161779 ENSGT00940000161834 ENSGT00390000000610 ENSGT00940000162405 ENSGT00940000155999 #12 ENSGT00940000159137 #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154866.B #24 ENSGT01030000234532.A.a.a.b #25 ENSGT00940000153431.b #26 ENSGT00940000163377.b.a Frog MODERN SPECIES 5 ppp4r3b (ENSXETG00000006072) cfap36 (ENSXETG00000006071) foxa2 (ENSXETG00000026998) #12 ENSXETG00000049453 pax1 (ENSXETG00000023497) #13 nkx2-2 (ENSXETG00000023499) #14 nkx2-4 (ENSXETG00000046545) #15 xrn2 (ENSXETG00000023501) #16 ENSXETG00000045298 kiz (ENSXETG00000023506) #18 ENSXETG00000036108 ENSXETG00000045769 ralgapa2 (ENSXETG00000027617) #19 insm1 (ENSXETG00000040150) #20 cfap61 (ENSXETG00000009697) #21 crnkl1 (ENSXETG00000009698) #22 naa20 (ENSXETG00000037147) #23 rin2 (ENSXETG00000009700) #24 slc24a3 (ENSXETG00000000793) #25 dtd1 (ENSXETG00000000790) #26 ENSXETG00000048226 dusp12 (ENSXETG00000000786) sec23b (ENSXETG00000000783) #28 ENSXETG00000040685 hebp2 (ENSXETG00000000784) XB5894820 [provisional] (ENSXETG00000043198) anapc1 (ENSXETG00000000782) rbbp9 (ENSXETG00000041539) #29 rrbp1 (ENSXETG00000000777) snx5 (ENSXETG00000000776) #36 ovol2 (ENSXETG00000024897) #34 Leishan spiny toad MODERN SPECIES 7 PAX1 (ENSLLEG00000016501) #13 ENSLLEG00000016343 #14 NKX2-4 (ENSLLEG00000016310) #15 XRN2 (ENSLLEG00000015999) #16 ENSLLEG00000015977 KIZ (ENSLLEG00000015612) #18 ENSLLEG00000015576 ENSLLEG00000015448 RALGAPA2 (ENSLLEG00000013982) #19 INSM1 (ENSLLEG00000013867) #20 ENSLLEG00000013844 ENSLLEG00000013836 ENSLLEG00000013817 CFAP61 (ENSLLEG00000013663) #21 ENSLLEG00000013641 CRNKL1 (ENSLLEG00000013452) #22 ATL2 (ENSLLEG00000012905) ENSLLEG00000012813 ENSLLEG00000012799 EIF4A3 (ENSLLEG00000012431) NINL (ENSLLEG00000012086) GINS1 (ENSLLEG00000012005) ABHD12 (ENSLLEG00000011886) PYGB (ENSLLEG00000010829) ENSLLEG00000010721 ENTPD6 (ENSLLEG00000010609) VSX1 (ENSLLEG00000010522) ACSS1 (ENSLLEG00000010430) APMAP (ENSLLEG00000010291) CST7 (ENSLLEG00000010202) ENSLLEG00000010185 Coelacanth MODERN SPECIES 3750 ENSLACG00000000801 #21 CRNKL1 (ENSLACG00000001129) #22 NAA20 (ENSLACG00000001945) #23 Actinopterygii ANCESTRAL SPECIES 27 ENSGT00950000183024.a.a.b ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999 #12 ENSGT00940000159137.b #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00940000167996 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a ENSGT00950000182852.A.a.a ENSGT00940000155724.r ENSGT00940000156078 ENSGT00530000063503.a.b ENSGT01010000222287.B.b.a.b.b ENSGT00390000013856 ENSGT00530000063775 ENSGT00950000182856.a.b ENSGT00940000173663 ENSGT00940000153511.b Neopterygii ANCESTRAL SPECIES 5 ENSGT00800000125320 ENSGT00950000183024.a.a.b ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999 #12 ENSGT00940000159137.b.a #13 ENSGT00940000159727 #14 ENSGT00940000162247 #15 ENSGT00670000098098 #16 ENSGT00390000010121 #18 ENSGT00400000024959 ENSGT00950000183139.A #19 ENSGT00940000162552 #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a ENSGT00950000182852.A.a.a ENSGT00940000155724.r ENSGT00940000156078 ENSGT00530000063503.a.b ENSGT01010000222287.B.b.a.b.b ENSGT00390000013856 ENSGT00530000063775 ENSGT00950000182856.a.b ENSGT00940000173663 ENSGT00940000153511.b Osteoglossocephalai ANCESTRAL SPECIES 69 ENSGT00390000008642 ENSGT00940000155634.r ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.b.b #13 ENSGT00390000006395 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926 ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.h ENSGT00390000004660.C.a.a.c ENSGT00950000182852.A.a.a.b ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a Osteoglossiformes ANCESTRAL SPECIES 11 ENSGT00940000161252.h ENSGT00940000157012.l ENSGT00530000063946.b.f ENSGT00940000163429.A ENSGT00940000163429.D.fc ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00390000006395 ENSGT00940000162247.f.a #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00940000155926 ENSGT00940000154923.C.w.b ENSGT00940000154550.a.`c ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.h ENSGT00530000063503.a.b.g.a ENSGT01010000222287.B.b.a.b.b.a ENSGT00940000154484.B.a.b ENSGT00390000013856 ENSGT00530000063775 ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r Asian bonytongue MODERN SPECIES TIAM2 (ENSSFOG00015001613) ENSSFOG00015001607 ENSSFOG00015001543 PRKD3 (ENSSFOG00015001426) ndufaf7 (ENSSFOG00015001363) cebpz (ENSSFOG00015001353) CEBPZOS (ENSSFOG00015024785) FOXA2 (ENSSFOG00015025181) #12 pax1a (ENSSFOG00015001264) #13 nkx2.2b (ENSSFOG00015025712) #14 nkx2.4b (ENSSFOG00015001209) #15 xrn2 (ENSSFOG00015001091) #16 ENSSFOG00015031237 insm1a (ENSSFOG00015001057) #20 CFAP61 (ENSSFOG00015000956) #21 crnkl1 (ENSSFOG00015000946) #22 ENSSFOG00015000869 ENSSFOG00015000851 COL12A1 (ENSSFOG00015000556) ENSSFOG00015000838 COX7A2 (ENSSFOG00015000544) TMEM30A (ENSSFOG00015000538) FILIP1 (ENSSFOG00015000493) SENP6 (ENSSFOG00015000468) myo6a (ENSSFOG00015000308) ENSSFOG00015026734 ENSSFOG00015028183 mei4 (ENSSFOG00015000204) nt5e (ENSSFOG00015000128) snx14 (ENSSFOG00015022100) syncrip (ENSSFOG00015022078) P. kingsleyae MODERN SPECIES 373 FOXA2 (ENSPKIG00000016753) #12 ENSPKIG00000016769 ENSPKIG00000016784 PAX1 (ENSPKIG00000016833) #13 nkx2.2a (ENSPKIG00000016859) #14 xrn2 (ENSPKIG00000016889) #16 NKX2-4 (ENSPKIG00000016983) #15 ENSPKIG00000016993 insm1a (ENSPKIG00000017014) #20 CFAP61 (ENSPKIG00000017034) #21 crnkl1 (ENSPKIG00000017093) #22 ENSPKIG00000017117 ENSPKIG00000017131 Clupeocephala ANCESTRAL SPECIES 1 ENSGT00940000163429.C ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.b.b #13 ENSGT00390000006395 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.h ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000173663 ENSGT00940000153511.b.r Otomorpha ANCESTRAL SPECIES 77 ENSGT00940000163429.C ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.b.b #13 ENSGT00940000159727 #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.a ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000177253 ENSGT00940000157865 Clupeiformes ANCESTRAL SPECIES 125 ENSGT00940000157012.l ENSGT00940000163429.B ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.b.b #13 ENSGT00940000159727.h.a #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.a ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000157865 Atlantic herring MODERN SPECIES 6 arid1b (ENSCHAG00000011086) ENSCHAG00000011131 CLDN20 (ENSCHAG00000011145) TIAM2 (ENSCHAG00000011173) ENSCHAG00000011422 cnksr3 (ENSCHAG00000011432) ENSCHAG00000011517 FOXA2 (ENSCHAG00000012210) #12 PAX1 (ENSCHAG00000012216) #13 nkx2.2b (ENSCHAG00000012230) #14 nkx2.4b (ENSCHAG00000012238) #15 xrn2 (ENSCHAG00000012251) #16 ENSCHAG00000012454 insm1a (ENSCHAG00000012459) #20 CFAP61 (ENSCHAG00000012466) #21 crnkl1 (ENSCHAG00000012480) #22 naa20 (ENSCHAG00000012539) #23 CD109 (ENSCHAG00000012626) COL12A1 (ENSCHAG00000013541) COX7A2 (ENSCHAG00000016006) tmem30ab (ENSCHAG00000016020) FILIP1 (ENSCHAG00000016062) SENP6 (ENSCHAG00000016080) myo6a (ENSCHAG00000016112) IMPG1 (ENSCHAG00000016231) HTR1B (ENSCHAG00000016315) mei4 (ENSCHAG00000016335) nt5e (ENSCHAG00000016354) snx14 (ENSCHAG00000016654) ENSCHAG00000002665 CDK19 (ENSCHAG00000002745) Denticle herring MODERN SPECIES 5 ENSDCDG00000029944 ENSDCDG00000029946 ENSDCDG00000029948 ENSDCDG00000003178 PRKD3 (ENSDCDG00000003326) ndufaf7 (ENSDCDG00000004083) cebpz (ENSDCDG00000004236) CEBPZOS (ENSDCDG00000004271) FOXA2 (ENSDCDG00000004272) #12 PAX1 (ENSDCDG00000004276) #13 nkx2.2b (ENSDCDG00000004279) #14 xrn2 (ENSDCDG00000004296) #16 ENSDCDG00000004325 insm1a (ENSDCDG00000004327) #20 CFAP61 (ENSDCDG00000004335) #21 crnkl1 (ENSDCDG00000004346) #22 naa20 (ENSDCDG00000004354) #23 CD109 (ENSDCDG00000004366) COL12A1 (ENSDCDG00000004422) COX7A2 (ENSDCDG00000004956) tmem30ab (ENSDCDG00000004958) FILIP1 (ENSDCDG00000004960) SENP6 (ENSDCDG00000004962) myo6a (ENSDCDG00000004969) ENSDCDG00000004977 HTR1B (ENSDCDG00000004982) mei4 (ENSDCDG00000004983) nt5e (ENSDCDG00000004985) snx14 (ENSDCDG00000005090) syncrip (ENSDCDG00000016212) ENSDCDG00000016248 Otophysi ANCESTRAL SPECIES 16 ENSGT00940000163429.C ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.b.b #13 ENSGT00940000159727 #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000154928.c.a.b ENSGT00940000155500.f ENSGT00390000001445 ENSGT00940000156692 ENSGT00390000000083.a ENSGT00390000005052 ENSGT00910000144260 ENSGT01030000234532.A.a.b.a ##25 ENSGT00390000003866.a.b.b ENSGT00940000176161 Characiphysae ANCESTRAL SPECIES 47 ENSGT00940000163429.C ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.b.b #13 ENSGT00940000159727.a #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000154928.c.a.b ENSGT00940000155500.f ENSGT00390000001445 ENSGT00940000156692 ENSGT00390000000083.a ENSGT00390000005052 ENSGT00910000144260 ENSGT01030000234532.A.a.b.a ##25 ENSGT00390000003866.a.b.b ENSGT00940000176161 Characiphysae_b ANCESTRAL SPECIES 40 ENSGT00940000163429.C ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00500000045333 ENSGT00390000006395 ENSGT00940000155999.e.b #12 ENSGT00940000159137.b.b #13 ENSGT00940000159727.a #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000154928.c.a.b ENSGT00940000155500.f ENSGT00390000001445 ENSGT00940000156692 ENSGT00390000000083.a ENSGT00390000005052 ENSGT00910000144260 ENSGT01030000234532.A.a.b.a ##25 ENSGT00390000003866.a.b.b ENSGT00940000176161 Characoidei ANCESTRAL SPECIES 48 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00500000045333 ENSGT00390000006395 ENSGT00940000155999.e.b #12 ENSGT00940000159137.b.b #13 ENSGT00940000159727.a.a #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000154928.c.a.b ENSGT00940000155500.f ENSGT00390000001445 ENSGT00940000156692 ENSGT00390000000083.a ENSGT00390000005052 ENSGT00910000144260 ENSGT01030000234532.A.a.b.a ##25 ENSGT00390000003866.a.b.b Red-bellied piranha MODERN SPECIES 40 ipcef1 (ENSPNAG00000010595) cnksr3 (ENSPNAG00000010654) ENSPNAG00000010661 PRKD3 (ENSPNAG00000010771) ndufaf7 (ENSPNAG00000010810) CEBPZOS (ENSPNAG00000001447) cebpz (ENSPNAG00000010829) FOXA2 (ENSPNAG00000010834) #12 PAX1 (ENSPNAG00000010858) #13 ENSPNAG00000010874 #14 nkx2.4b (ENSPNAG00000001469) #15 xrn2 (ENSPNAG00000010956) #16 ENSPNAG00000010977 insm1a (ENSPNAG00000001477) #20 CFAP61 (ENSPNAG00000011009) #21 crnkl1 (ENSPNAG00000001507) #22 naa20 (ENSPNAG00000001513) #23 CD109 (ENSPNAG00000001527) COL12A1 (ENSPNAG00000011368) COX7A2 (ENSPNAG00000001710) tmem30ab (ENSPNAG00000011398) FILIP1 (ENSPNAG00000001732) HMBOX1 (ENSPNAG00000001748) KIF13B (ENSPNAG00000001764) ints9 (ENSPNAG00000011555) extl3 (ENSPNAG00000011578) riox1 (ENSPNAG00000011597) NDUFB1 (ENSPNAG00000011613) cpsf2 (ENSPNAG00000001849) SLC24A4 (ENSPNAG00000011671) ##25 tmem121ab (ENSPNAG00000001868) Mexicana tetra MODERN SPECIES 18 ipcef1 (ENSAMXG00000031895) cnksr3 (ENSAMXG00000018252) ENSAMXG00000033752 PRKD3 (ENSAMXG00000018256) ndufaf7 (ENSAMXG00000018261) CEBPZOS (ENSAMXG00000039376) cebpz (ENSAMXG00000018270) FOXA2 (ENSAMXG00000039512) #12 PAX1 (ENSAMXG00000018287) #13 NKX2-2 (ENSAMXG00000041974) #14 nkx2.4b (ENSAMXG00000029652) #15 xrn2 (ENSAMXG00000018301) #16 ENSAMXG00000035382 insm1a (ENSAMXG00000037688) #20 CFAP61 (ENSAMXG00000018322) #21 crnkl1 (ENSAMXG00000018334) #22 naa20 (ENSAMXG00000018356) #23 CD109 (ENSAMXG00000018366) COL12A1 (ENSAMXG00000018420) COX7A2 (ENSAMXG00000033504) tmem30ab (ENSAMXG00000018508) FILIP1 (ENSAMXG00000018528) HMBOX1 (ENSAMXG00000018539) KIF13B (ENSAMXG00000018566) ints9 (ENSAMXG00000018614) extl3 (ENSAMXG00000018645) NDUFB1 (ENSAMXG00000040639) riox1 (ENSAMXG00000034350) cpsf2 (ENSAMXG00000018696) SLC24A4 (ENSAMXG00000034216) ##25 tmem121ab (ENSAMXG00000025080) Electric eel MODERN SPECIES 45 PRKD3 (ENSEEEG00000009669) ndufaf7 (ENSEEEG00000009632) cebpz (ENSEEEG00000009629) CEBPZOS (ENSEEEG00000009627) FOXA2 (ENSEEEG00000009619) #12 PAX1 (ENSEEEG00000009617) #13 nkx2.2b (ENSEEEG00000009615) #14 nkx2.4b (ENSEEEG00000009613) #15 xrn2 (ENSEEEG00000009608) #16 ENSEEEG00000009604 insm1a (ENSEEEG00000009602) #20 ENSEEEG00000009601 ENSEEEG00000009599 #21 ENSEEEG00000009596 #21 ENSEEEG00000009595 crnkl1 (ENSEEEG00000009593) #22 naa20 (ENSEEEG00000009578) #23 CD109 (ENSEEEG00000009367) COL12A1 (ENSEEEG00000009347) ENSEEEG00000009345 COX7A2 (ENSEEEG00000009342) tmem30ab (ENSEEEG00000009338) FILIP1 (ENSEEEG00000009333) HMBOX1 (ENSEEEG00000009327) KIF13B (ENSEEEG00000009314) ints9 (ENSEEEG00000009300) extl3 (ENSEEEG00000009291) riox1 (ENSEEEG00000009261) NDUFB1 (ENSEEEG00000009259) cpsf2 (ENSEEEG00000009248) Channel catfish DUPLICATION Channel catfish DUPLICATION Channel catfish MODERN SPECIES 24 pggt1b (ENSIPUG00000000206) trim36 (ENSIPUG00000000211) ccser1 (ENSIPUG00000000219) grid2 (ENSIPUG00000000228) atoh1 (ENSIPUG00000000238) smarcad1a (ENSIPUG00000000242) Prf1 (ENSIPUG00000000249) MPEG1 (ENSIPUG00000000251) tspan36 (ENSIPUG00000000255) mapk4 (ENSIPUG00000000263) ENSIPUG00000000268 slc20a2 (ENSIPUG00000000271) hsd17b3 (ENSIPUG00000000280) ercc6l2 (ENSIPUG00000000283) ptch1 (ENSIPUG00000000302) crnkl1 (ENSIPUG00000000315) #22 fancc (ENSIPUG00000000317) c5h9orf3 (ENSIPUG00000000322) ENSIPUG00000000330 DOCK8 (ENSIPUG00000000332) ENSIPUG00000000346 ENSIPUG00000000349 APEX2 (ENSIPUG00000000352) ENSIPUG00000000354 csde1 (ENSIPUG00000000355) porcnl (ENSIPUG00000000359) PDZD4 (ENSIPUG00000000367) IQSEC2 (ENSIPUG00000000371) ENSIPUG00000000386 cacna1fb (ENSIPUG00000000393) sypa (ENSIPUG00000000410) Channel catfish MODERN SPECIES 24 lrrc47 (ENSIPUG00000007426) cep104 (ENSIPUG00000007347) b3gnt7l (ENSIPUG00000007301) c5h1orf174 (ENSIPUG00000007281) dffb (ENSIPUG00000007254) ifrd2 (ENSIPUG00000007228) amt (ENSIPUG00000007178) si:dkey-20d21.12 (ENSIPUG00000007162) hyal3 (ENSIPUG00000007146) prkar2aa (ENSIPUG00000007107) mgll (ENSIPUG00000007050) slc26a6 (ENSIPUG00000006973) wdr6 (ENSIPUG00000006934) ENSIPUG00000006918 CELSR3 (ENSIPUG00000006860) crnkl1 (ENSIPUG00000006836) #22 dalrd3 (ENSIPUG00000006748) impdh2 (ENSIPUG00000006658) arih2 (ENSIPUG00000006582) xpc (ENSIPUG00000006547) si:dkey-72l14.3 (ENSIPUG00000006523) ENSIPUG00000006509 borcs6 (ENSIPUG00000006506) sema3ab (ENSIPUG00000006439) rhoab (ENSIPUG00000006392) tmem115 (ENSIPUG00000006379) ENSIPUG00000006374 ajap1 (ENSIPUG00000006361) nphp4 (ENSIPUG00000006318) ENSIPUG00000006297 sema3b (ENSIPUG00000006199) Channel catfish MODERN SPECIES 17 ENSIPUG00000006251 ipcef1 (ENSIPUG00000006290) cnksr3 (ENSIPUG00000006319) ENSIPUG00000006370 prkd3 (ENSIPUG00000006387) ndufaf7 (ENSIPUG00000006535) cebpz (ENSIPUG00000006584) cebpzos (ENSIPUG00000006606) FOXA2 (ENSIPUG00000006623) #12 PAX1 (ENSIPUG00000006630) #13 xrn2 (ENSIPUG00000006639) #16 nkx2.4b (ENSIPUG00000006672) #15 ENSIPUG00000006689 insm1a (ENSIPUG00000006693) #20 cfap61 (ENSIPUG00000006707) #21 crnkl1 (ENSIPUG00000006751) #22 naa20 (ENSIPUG00000006781) #23 cd109 (ENSIPUG00000006809) ENSIPUG00000006882 COX7A2 (ENSIPUG00000007356) TMEM30A (ENSIPUG00000007370) vsnl1a (ENSIPUG00000007389) fam49a (ENSIPUG00000007421) fbxo16 (ENSIPUG00000007590) FZD3 (ENSIPUG00000007603) cdc42bpab (ENSIPUG00000007633) lft1 (ENSIPUG00000007713) hnrnpu (ENSIPUG00000007749) ENSIPUG00000007794 cnstb (ENSIPUG00000007828) snap25 (ENSIPUG00000007864) Cyprinoidei ANCESTRAL SPECIES 57 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00950000182852.A.a.a.a ENSGT00940000154928.c.a.b ENSGT00940000155500.f ENSGT00390000001445 ENSGT00940000156692 ENSGT00390000000083.a ENSGT00390000005052 ENSGT00910000144260 ENSGT01030000234532.A.a.b.a ##25 ENSGT00390000003866.a.b.b ENSGT00530000063737.l.a ENSGT00390000016577.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 766 ENSGT00940000159137.b.b.a.a #13 ENSGT00940000159727.d.b.a #14 ENSGT00940000162247.f.d #15 ENSGT00670000098098.e #16 ENSGT00940000162552.a.b.b #20 ENSGT00390000004987.ib #21 ENSGT00550000074931.c #22 ENSGT00550000075046.c #23 ENSGT00940000155926.e.a ENSGT00940000154923.C.w.b.a Cyprininae_a ANCESTRAL SPECIES 289 ENSGT00940000159137.b.b.a.a #13 ENSGT00940000159727.d.b.a #14 ENSGT00940000162247.f.d #15 ENSGT00670000098098.e #16 ENSGT00940000162552.a.b.b #20 ENSGT00390000004987.ib #21 ENSGT00550000074931.c #22 ENSGT00550000075046.c #23 ENSGT00940000155926.e.a ENSGT00940000154923.C.w.b.a ENSGT00950000182852.A.a.a.a.b ENSGT00940000154928.c.a.b.d ENSGT00940000155500.f.a ENSGT00940000156692.d ENSGT00390000000083.a.d ENSGT00390000005052.z.b ENSGT00390000005052.z.a.a.a ENSGT00910000144260.a ENSGT01030000234532.A.a.b.a.b ##25 ENSGT00390000003866.a.b.b.b ENSGT00530000063737.l.a.b ENSGT00390000016577.b.b.e Golden-line barbel MODERN SPECIES 672 PAX1 (ENSSGRG00000001737) #13 nkx2.2b (ENSSGRG00000001735) #14 ENSSGRG00000001734 #15 xrn2 (ENSSGRG00000000445) #16 insm1a (ENSSGRG00000000259) #20 CFAP61 (ENSSGRG00000000226) #21 crnkl1 (ENSSGRG00000000168) #22 naa20 (ENSSGRG00000000132) #23 COL12A1 (ENSSGRG00000049441) ENSSGRG00000049417 FILIP1 (ENSSGRG00000049414) HMBOX1 (ENSSGRG00000049412) ENSSGRG00000049236 extl3 (ENSSGRG00000049230) NDUFB1 (ENSSGRG00000049227) cpsf2 (ENSSGRG00000049194) SLC24A4 (ENSSGRG00000049181) ##25 tmem121ab (ENSSGRG00000049180) FUT8 (ENSSGRG00000049103) gphnb (ENSSGRG00000047458) pals1b (ENSSGRG00000047406) atp6v1d (ENSSGRG00000047392) Common carp reference MODERN SPECIES 28 hadhaa (ENSCCRG00000074806) GAREM2 (ENSCCRG00000010843) ENSCCRG00000010851 prep (ENSCCRG00000010847) tram2 (ENSCCRG00000028190) efhc1 (ENSCCRG00000028193) ENSCCRG00000065663 ENSCCRG00000008668 ENSCCRG00000041541 PAX1 (ENSCCRG00000041349) #13 nkx2.2b (ENSCCRG00000041579) #14 nkx2.4b (ENSCCRG00000041582) #15 xrn2 (ENSCCRG00000041635) #16 INSM1 (ENSCCRG00000066351) #20 ENSCCRG00000048370 #21 crnkl1 (ENSCCRG00000066493) #22 NAA20 (ENSCCRG00000042226) #23 ENSCCRG00000042213 ENSCCRG00000011536 ENSCCRG00000043874 ENSCCRG00000069819 ENSCCRG00000013219 extl3 (ENSCCRG00000011174) riox1 (ENSCCRG00000025298) NDUFB1 (ENSCCRG00000025303) cpsf2 (ENSCCRG00000010971) SLC24A4 (ENSCCRG00000060912) ##25 tmem121ab (ENSCCRG00000076345) ENSCCRG00000059381 FUT8 (ENSCCRG00000003994) gphnb (ENSCCRG00000036584) Goldfish DUPLICATION Goldfish MODERN SPECIES 1604 crnkl1 (ENSCARG00000050330) #22 naa20 (ENSCARG00000050294) #23 Goldfish MODERN SPECIES 2903 ENSCARG00000045617 ENSCARG00000045627 IPO13 (ENSCARG00000045745) PAX1 (ENSCARG00000048527) #13 nkx2.2b (ENSCARG00000048534) #14 nkx2.4b (ENSCARG00000048559) #15 xrn2 (ENSCARG00000048640) #16 insm1a (ENSCARG00000048872) #20 crnkl1 (ENSCARG00000048899) #22 naa20 (ENSCARG00000048960) #23 ENSCARG00000048986 COL12A1 (ENSCARG00000049227) FILIP1 (ENSCARG00000052673) Cyprininae ANCESTRAL SPECIES 517 ENSGT00940000159137.b.b.a.b #13 ENSGT00940000159727.d.b.b #14 ENSGT00940000162247.f.c #15 ENSGT00670000098098.f #16 ENSGT00940000162552.a.b.a #20 ENSGT00390000004987.hb #21 ENSGT00550000074931.d #22 ENSGT00550000075046.d #23 ENSGT00940000155926.e.b ENSGT00940000154923.C.w.b.b ENSGT00940000155999.e.a.b #12 ENSGT00940000159137.b.a.h #13 ENSGT00940000159727.c #14 ENSGT00940000162247.e.b #15 ENSGT00390000010121 #18 ENSGT00950000183139.A.gb #19 ENSGT00940000162552.a.a.b #20 ENSGT00940000154923.C.w.a ENSGT00940000154550.a ENSGT00950000182852.A.a.a.a.a ENSGT00940000154928.c.a.b.c Cyprininae_a ANCESTRAL SPECIES 142 ENSGT00940000159137.b.b.a.b #13 ENSGT00940000159727.d.b.b #14 ENSGT00940000162247.f.c #15 ENSGT00670000098098.f #16 ENSGT00940000162552.a.b.a #20 ENSGT00390000004987.hb #21 ENSGT00550000074931.d #22 ENSGT00550000075046.d #23 ENSGT00940000155926.e.b ENSGT00940000154923.C.w.b.b ENSGT00950000182852.A.a.a.a.a ENSGT00940000154928.c.a.b.c ENSGT00940000155500.f.b ENSGT00390000001445 ENSGT00940000156692.c ENSGT00390000000083.a.c ENSGT00390000005052.y ENSGT00910000144260.b ENSGT00390000005052.z.a.a.b ENSGT01030000234532.A.a.b.a.a ##25 ENSGT00390000003866.a.b.b.a ENSGT00530000063737.l.a.a Common carp reference MODERN SPECIES 34 GAREM2 (ENSCCRG00000010023) ENSCCRG00000023759 prep (ENSCCRG00000010038) xkr5a (ENSCCRG00000010765) tram2 (ENSCCRG00000004112) ENSCCRG00000076012 ENSCCRG00000028238 ENSCCRG00000077241 ENSCCRG00000034744 PAX1 (ENSCCRG00000034722) #13 nkx2.2b (ENSCCRG00000012145) #14 nkx2.4b (ENSCCRG00000012144) #15 xrn2 (ENSCCRG00000005388) #16 INSM1 (ENSCCRG00000053371) #20 CFAP61 (ENSCCRG00000005348) #21 crnkl1 (ENSCCRG00000073378) #22 NAA20 (ENSCCRG00000005306) #23 ENSCCRG00000064298 ENSCCRG00000011873 COX7A2 (ENSCCRG00000043892) ENSCCRG00000011785 ENSCCRG00000049434 ENSCCRG00000005045 ints9 (ENSCCRG00000016840) extl3 (ENSCCRG00000010928) riox1 (ENSCCRG00000011157) NDUFB1 (ENSCCRG00000011156) cpsf2 (ENSCCRG00000010957) SLC24A4 (ENSCCRG00000078632) ##25 tmem121ab (ENSCCRG00000070188) FUT8 (ENSCCRG00000004167) Golden-line barbel MODERN SPECIES 346 TRIM67 (ENSSGRG00000027590) exoc8 (ENSSGRG00000027591) sprtn (ENSSGRG00000027592) FAM89A (ENSSGRG00000027593) arv1 (ENSSGRG00000027594) ttc13 (ENSSGRG00000027598) ENSSGRG00000027786 si:ch73-111k22.2 (ENSSGRG00000027790) ENSSGRG00000027792 PAX1 (ENSSGRG00000027793) #13 nkx2.2b (ENSSGRG00000027794) #14 nkx2.4b (ENSSGRG00000027795) #15 xrn2 (ENSSGRG00000027818) #16 insm1a (ENSSGRG00000028455) #20 CFAP61 (ENSSGRG00000028457) #21 crnkl1 (ENSSGRG00000028462) #22 naa20 (ENSSGRG00000028467) #23 COL12A1 (ENSSGRG00000028627) ENSSGRG00000028730 FILIP1 (ENSSGRG00000028731) HMBOX1 (ENSSGRG00000028738) ENSSGRG00000028787 ints9 (ENSSGRG00000030370) extl3 (ENSSGRG00000030387) cpsf2 (ENSSGRG00000030388) NDUFB1 (ENSSGRG00000030412) SLC24A4 (ENSSGRG00000030413) ##25 tmem121ab (ENSSGRG00000030415) FUT8 (ENSSGRG00000030416) Goldfish MODERN SPECIES 12 prep (ENSCARG00000054065) ENSCARG00000054024 xkr5a (ENSCARG00000053972) tram2 (ENSCARG00000053905) ENSCARG00000053889 IPO13 (ENSCARG00000053028) ENSCARG00000052887 ENSCARG00000052859 mgst3a (ENSCARG00000052832) PAX1 (ENSCARG00000052815) #13 nkx2.2b (ENSCARG00000052799) #14 nkx2.4b (ENSCARG00000052776) #15 xrn2 (ENSCARG00000052557) #16 insm1a (ENSCARG00000052514) #20 CFAP61 (ENSCARG00000052400) #21 crnkl1 (ENSCARG00000052349) #22 naa20 (ENSCARG00000052297) #23 CD109 (ENSCARG00000052265) COL12A1 (ENSCARG00000048966) COX7A2 (ENSCARG00000048474) FILIP1 (ENSCARG00000048454) HMBOX1 (ENSCARG00000048281) ENSCARG00000048254 ints9 (ENSCARG00000048211) extl3 (ENSCARG00000048142) riox1 (ENSCARG00000047018) NDUFB1 (ENSCARG00000046985) cpsf2 (ENSCARG00000046882) SLC24A4 (ENSCARG00000046782) ##25 tmem121ab (ENSCARG00000046762) FUT8 (ENSCARG00000046724) Zebrafish MODERN SPECIES 12 xkr5a (ENSDARG00000103017) tram2 (ENSDARG00000030092) ENSDARG00000067927 IPO13 (ENSDARG00000060618) ENSDARG00000099804 ENSDARG00000100162 insm1a (ENSDARG00000091756) #20 ENSDARG00000079997 #21 ENSDARG00000106343 mgst3a (ENSDARG00000102744) PAX1 (ENSDARG00000073814) #13 gfus.3 (ENSDARG00000042661) nkx2.2b (ENSDARG00000101549) #14 nkx2.4b (ENSDARG00000104107) #15 xrn2 (ENSDARG00000101900) #16 crnkl1 (ENSDARG00000007901) #22 naa20 (ENSDARG00000039493) #23 CD109 (ENSDARG00000060609) ENSDARG00000102208 ENSDARG00000115208 COL12A1 (ENSDARG00000019601) COX7A2 (ENSDARG00000110700) FILIP1 (ENSDARG00000079634) HMBOX1 (ENSDARG00000109287) KIF13B (ENSDARG00000073859) ints9 (ENSDARG00000067913) extl3 (ENSDARG00000026811) riox1 (ENSDARG00000067838) NDUFB1 (ENSDARG00000087456) cpsf2 (ENSDARG00000028971) SLC24A4 (ENSDARG00000067509) ##25 Euteleosteomorpha ANCESTRAL SPECIES 8 ENSGT00800000125320 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00500000045333 ENSGT00390000006395 ENSGT00940000177839 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.h ENSGT00940000168150.b ENSGT00530000063503.a.b.g.a ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b Acanthomorphata ANCESTRAL SPECIES 65 ENSGT00390000001588 ENSGT00500000045333 ENSGT00390000006395 ENSGT00940000177839 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r Cod MODERN SPECIES 13 ENSGMOG00000026269 ENSGMOG00000035495 ENSGMOG00000016869 ENSGMOG00000006163 ENSGMOG00000037260 ENSGMOG00000017910 ENSGMOG00000017880 ENSGMOG00000017871 ENSGMOG00000017852 #12 ENSGMOG00000033928 #13 nkx2.2b (ENSGMOG00000028363) #14 ENSGMOG00000013424 #15 xrn2 (ENSGMOG00000013436) #16 INSM1 (ENSGMOG00000031294) #20 CFAP61 (ENSGMOG00000008811) #21 crnkl1 (ENSGMOG00000007609) #22 naa20 (ENSGMOG00000016881) #23 CD109 (ENSGMOG00000022502) COL12A1 (ENSGMOG00000010546) COX7A2 (ENSGMOG00000010543) TMEM30A (ENSGMOG00000010538) ENSGMOG00000033274 ENSGMOG00000024927 ENSGMOG00000001624 ENSGMOG00000035581 ENSGMOG00000029543 ENSGMOG00000031094 ENSGMOG00000037152 ENSGMOG00000020443 ENSGMOG00000002513 ENSGMOG00000000497 Euacanthomorphacea ANCESTRAL SPECIES 55 ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00500000045333 ENSGT00390000006395 ENSGT00940000177839 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.h ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Pinecone sodierfish MODERN SPECIES 16 ENSMMDG00005011335 PRKD3 (ENSMMDG00005011325) ndufaf7 (ENSMMDG00005011273) CEBPZOS (ENSMMDG00005011264) cebpz (ENSMMDG00005011256) FOXA2 (ENSMMDG00005011254) #12 ENSMMDG00005011249 #13 nkx2.2b (ENSMMDG00005011246) #14 NKX2-4 (ENSMMDG00005011243) #15 xrn2 (ENSMMDG00005011225) #16 ENSMMDG00005011211 insm1a (ENSMMDG00005011210) #20 ENSMMDG00005011207 ENSMMDG00005011204 #21 ENSMMDG00005011202 crnkl1 (ENSMMDG00005011162) #22 naa20 (ENSMMDG00005011150) #23 ENSMMDG00005011057 COL12A1 (ENSMMDG00005010765) ptger2b (ENSMMDG00005010715) ptger2b (ENSMMDG00005010711) zfp36l1b (ENSMMDG00005010708) rad51b (ENSMMDG00005010705) ENSMMDG00005010701 allc (ENSMMDG00005010691) rps7 (ENSMMDG00005010678) rnaseh1 (ENSMMDG00005010675) myt1la (ENSMMDG00005010664) e2f6 (ENSMMDG00005010659) asap2b (ENSMMDG00005010647) cpsf3 (ENSMMDG00005010604) Percomorphaceae ANCESTRAL SPECIES 66 ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00940000177839 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Percomorphaceae_B ANCESTRAL SPECIES 18 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Ovalentaria ANCESTRAL SPECIES 19 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Atherinomorphae ANCESTRAL SPECIES 27 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000173663 Oryzias ANCESTRAL SPECIES 19 ENSGT00940000157314.A ENSGT00940000159274 ENSGT00390000008003 ENSGT00940000156810.b.a.a ENSGT00940000156764.a ENSGT00940000155617.B ENSGT00530000063698.a.a ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b.a ENSGT00530000063503.a.b.g.a.e ENSGT00940000156078.d ENSGT00940000155724.r Oryzias_b ANCESTRAL SPECIES 17 ENSGT01000000217580.A ENSGT00390000008003 ENSGT00940000164472.a.a.b.b.a.a.b.a.a.a.a.a.b ENSGT00940000156810.b.a.a ENSGT00940000156764.a ENSGT00940000155617.B ENSGT00530000063698.a.a ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b.a ENSGT00530000063503.a.b.g.a.e ENSGT00940000156078.d ENSGT00940000155724.r ENSGT00550000074954 ENSGT00940000159276 ENSGT00940000164930.b ENSGT00940000155693.a.a ENSGT00530000063775.a.b ENSGT00940000154550.a ENSGT00950000182852.A.a.a.a Indian medaka MODERN SPECIES 22 stum (ENSOMEG00000019326) ENSOMEG00000019335 coq8aa (ENSOMEG00000019391) ENSOMEG00000019426 ENSOMEG00000019629 ENSOMEG00000019658 tmem200a (ENSOMEG00000019668) cebpz (ENSOMEG00000019691) CEBPZOS (ENSOMEG00000019698) FOXA2 (ENSOMEG00000019706) #12 nkx2.2b (ENSOMEG00000019717) #14 NKX2-4 (ENSOMEG00000019726) #15 xrn2 (ENSOMEG00000019820) #16 insm1a (ENSOMEG00000019839) #20 ENSOMEG00000019855 #21 crnkl1 (ENSOMEG00000019895) #22 naa20 (ENSOMEG00000019922) #23 ENSOMEG00000020110 COL12A1 (ENSOMEG00000020394) mei4 (ENSOMEG00000020504) HTR1B (ENSOMEG00000020510) myo6a (ENSOMEG00000020564) SENP6 (ENSOMEG00000020664) tmed10 (ENSOMEG00000020712) fosab (ENSOMEG00000020744) ENSOMEG00000020753 jdp2b (ENSOMEG00000020762) KCNK2 (ENSOMEG00000020822) ENSOMEG00000020847 ENSOMEG00000020852 ABHD1 (ENSOMEG00000020885) Javanese ricefish MODERN SPECIES 16 stum (ENSOJAG00000018702) ENSOJAG00000018675 coq8aa (ENSOJAG00000017297) ENSOJAG00000017137 ENSOJAG00000016994 tmem200a (ENSOJAG00000016968) cebpz (ENSOJAG00000016955) CEBPZOS (ENSOJAG00000016941) FOXA2 (ENSOJAG00000016933) #12 nkx2.2b (ENSOJAG00000016925) #14 NKX2-4 (ENSOJAG00000016916) #15 xrn2 (ENSOJAG00000016674) #16 ENSOJAG00000016640 insm1a (ENSOJAG00000016620) #20 CFAP61 (ENSOJAG00000016601) #21 crnkl1 (ENSOJAG00000016515) #22 naa20 (ENSOJAG00000016456) #23 ENSOJAG00000016436 ENSOJAG00000016389 COL12A1 (ENSOJAG00000013844) mei4 (ENSOJAG00000013636) HTR1B (ENSOJAG00000013616) ENSOJAG00000013566 myo6a (ENSOJAG00000013278) SENP6 (ENSOJAG00000013200) tmed10 (ENSOJAG00000013126) fosab (ENSOJAG00000013093) ENSOJAG00000013078 jdp2b (ENSOJAG00000013063) NT5E (ENSOJAG00000012499) COX7A2 (ENSOJAG00000012433) Oryzias_a ANCESTRAL SPECIES 39 ENSGT00940000157314.A ENSGT00940000159274 ENSGT00390000008003 ENSGT00940000156810.b.a.a ENSGT00940000156764.a ENSGT00940000155617.B ENSGT00530000063698.a.a ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b.a ENSGT00530000063503.a.b.g.a.e ENSGT00940000168150.b ENSGT00940000156078.d ENSGT00940000155724.r ENSGT01000000221402 ENSGT00950000182902.a.d ENSGT00940000156557.h ENSGT00940000164041.b.a ENSGT00940000156560.h ENSGT00940000165510 Japanese Medaka HdrR MODERN SPECIES 16 ehd3 (ENSORLG00000017118) stum (ENSORLG00000022788) coq8aa (ENSORLG00000017137) ENSORLG00000017142 ENSORLG00000017159 tmem200a (ENSORLG00000017167) cebpz (ENSORLG00000017177) CEBPZOS (ENSORLG00000029671) ENSORLG00000030134 #12 nkx2.2b (ENSORLG00000017180) #14 ENSORLG00000017185 #15 xrn2 (ENSORLG00000017213) #16 ENSORLG00000017225 insm1a (ENSORLG00000023368) #20 CFAP61 (ENSORLG00000017228) #21 crnkl1 (ENSORLG00000017240) #22 naa20 (ENSORLG00000017247) #23 ENSORLG00000017259 ENSORLG00000017285 ENSORLG00000017291 HTR1B (ENSORLG00000017292) ENSORLG00000024567 IMPG1 (ENSORLG00000017297) myo6a (ENSORLG00000017306) ENSORLG00000017309 ENSORLG00000027607 ABHD1 (ENSORLG00000017314) SNX9 (ENSORLG00000017321) ENSORLG00000017323 ENSORLG00000017331 ENSORLG00000017340 Chinese medaka MODERN SPECIES 369 ehd3 (ENSOSIG00000020661) stum (ENSOSIG00000020652) coq8aa (ENSOSIG00000018868) ENSOSIG00000018794 ENSOSIG00000018558 tmem200a (ENSOSIG00000018508) cebpz (ENSOSIG00000018501) CEBPZOS (ENSOSIG00000018492) FOXA2 (ENSOSIG00000018489) #12 nkx2.2b (ENSOSIG00000018486) #14 NKX2-4 (ENSOSIG00000018482) #15 xrn2 (ENSOSIG00000018416) #16 ENSOSIG00000018363 insm1a (ENSOSIG00000018359) #20 CFAP61 (ENSOSIG00000018357) #21 crnkl1 (ENSOSIG00000018263) #22 naa20 (ENSOSIG00000018250) #23 ENSOSIG00000018246 COL12A1 (ENSOSIG00000017204) ENSOSIG00000017174 HTR1B (ENSOSIG00000017168) ENSOSIG00000017164 ENSOSIG00000016097 Cyprinodontiformes ANCESTRAL SPECIES 14 ENSGT00940000155734.mb.b ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00390000001588 ENSGT00950000183024.a.a.b.r ENSGT00940000163429.C ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000173663 Cyprinodontoidei ANCESTRAL SPECIES 32 ENSGT00940000155734.mb.b ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00390000001588 ENSGT00950000183024.a.a.b.r ENSGT00940000163429.C ENSGT00500000045333 ENSGT00390000006395 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 NAME_4 ANCESTRAL SPECIES 204 ENSGT00390000003466 ENSGT00390000014122 ENSGT00390000001588 ENSGT00950000183024.a.a.b.r ENSGT00940000163429.C ENSGT00500000045333 ENSGT00390000006395 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e Mummichog MODERN SPECIES 2330 ENSFHEG00000012605 ENSFHEG00000000278 ENSFHEG00000012632 ndufaf7 (ENSFHEG00000012639) ENSFHEG00000012788 cnksr3 (ENSFHEG00000012795) ENSFHEG00000012798 cebpz (ENSFHEG00000012867) ENSFHEG00000012896 nkx2.4b (ENSFHEG00000012908) #15 ENSFHEG00000012945 #16 xrn2 (ENSFHEG00000013039) #16 ENSFHEG00000013046 insm1a (ENSFHEG00000013057) #20 CFAP61 (ENSFHEG00000013085) #21 crnkl1 (ENSFHEG00000013163) #22 naa20 (ENSFHEG00000000893) #23 CD109 (ENSFHEG00000013324) ENSFHEG00000013372 ENSFHEG00000013400 ENSFHEG00000013424 COX7A2 (ENSFHEG00000013448) tmem30ab (ENSFHEG00000000306) FILIP1 (ENSFHEG00000013476) ENSFHEG00000013481 ENSFHEG00000013490 myo6a (ENSFHEG00000013555) ENSFHEG00000013561 ENSFHEG00000013570 ENSFHEG00000013581 Sheepshead minnow MODERN SPECIES 295 insm1a (ENSCVAG00000015121) #20 ENSCVAG00000015128 #21 crnkl1 (ENSCVAG00000015172) #22 naa20 (ENSCVAG00000015181) #23 CD109 (ENSCVAG00000015224) COL12A1 (ENSCVAG00000015301) ENSCVAG00000015321 ENSCVAG00000015337 COX7A2 (ENSCVAG00000015347) ENSCVAG00000015413 ENSCVAG00000015429 ENSCVAG00000015533 ENSCVAG00000015555 TJP1 (ENSCVAG00000015599) ENSCVAG00000015669 DUOXA2 (ENSCVAG00000015681) ENSCVAG00000015695 fan1 (ENSCVAG00000015740) Poeciliinae ANCESTRAL SPECIES 44 ENSGT00940000155734.mb.b ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00390000001588 ENSGT00950000183024.a.a.b.r ENSGT00940000163429.C ENSGT00500000045333 ENSGT00390000006395 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a Poecilia ANCESTRAL SPECIES 68 ENSGT00940000155734.mb.b ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00390000001588 ENSGT00950000183024.a.a.b.r ENSGT00940000163429.C ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a NAME_6 ANCESTRAL SPECIES 149 ENSGT00940000155734.mb.b ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00390000001588 ENSGT00950000183024.a.a.b.r ENSGT00940000163429.C ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000160083 Amazon molly MODERN SPECIES 729 xrcc3 (ENSPFOG00000002199) brf1b (ENSPFOG00000002266) btbd6b (ENSPFOG00000002547) ENSPFOG00000002604 myt1la (ENSPFOG00000002613) rnaseh1 (ENSPFOG00000002841) rps7 (ENSPFOG00000002935) ndufaf7 (ENSPFOG00000002988) ENSPFOG00000003177 cnksr3 (ENSPFOG00000003696) cebpz (ENSPFOG00000003831) nkx2.4b (ENSPFOG00000004150) #15 xrn2 (ENSPFOG00000004182) #16 ENSPFOG00000004659 CFAP61 (ENSPFOG00000004686) #21 crnkl1 (ENSPFOG00000005102) #22 naa20 (ENSPFOG00000005287) #23 CD109 (ENSPFOG00000005419) COL12A1 (ENSPFOG00000006502) COX7A2 (ENSPFOG00000007774) tmem30ab (ENSPFOG00000007828) FILIP1 (ENSPFOG00000007959) Sailfin molly MODERN SPECIES 474 ENSPLAG00000007408 #15 xrn2 (ENSPLAG00000007351) #16 ENSPLAG00000007334 insm1a (ENSPLAG00000007318) #20 CFAP61 (ENSPLAG00000007303) #21 crnkl1 (ENSPLAG00000007288) #22 naa20 (ENSPLAG00000007277) #23 CD109 (ENSPLAG00000007235) COL12A1 (ENSPLAG00000007029) ENSPLAG00000006940 COX7A2 (ENSPLAG00000006916) tmem30ab (ENSPLAG00000006908) FILIP1 (ENSPLAG00000006899) SLC35D3 (ENSPLAG00000006883) Guppy MODERN SPECIES 452 btbd6b (ENSPREG00000012104) ENSPREG00000012111 myt1la (ENSPREG00000012138) rnaseh1 (ENSPREG00000012197) rps7 (ENSPREG00000012210) ndufaf7 (ENSPREG00000012262) ENSPREG00000012298 cnksr3 (ENSPREG00000012330) ENSPREG00000012371 #21 cebpz (ENSPREG00000012387) ENSPREG00000012406 ENSPREG00000012420 xrn2 (ENSPREG00000012452) #16 nkx2.4b (ENSPREG00000012541) #15 ENSPREG00000012580 #21 crnkl1 (ENSPREG00000012615) #22 naa20 (ENSPREG00000012682) #23 ENSPREG00000012722 ENSPREG00000012859 ENSPREG00000012897 COX7A2 (ENSPREG00000012966) TMEM30A (ENSPREG00000013031) FILIP1 (ENSPREG00000013051) ENSPREG00000013060 ENSPREG00000013069 zbtb1 (ENSPREG00000013078) ENSPREG00000013085 ENSPREG00000013114 myh6 (ENSPREG00000013132) pak6b (ENSPREG00000013145) spint1b (ENSPREG00000013167) Platyfish MODERN SPECIES 6 myt1la (ENSXMAG00000002367) rnaseh1 (ENSXMAG00000002357) rps7 (ENSXMAG00000002346) ndufaf7 (ENSXMAG00000007530) ENSXMAG00000007517 cnksr3 (ENSXMAG00000007512) ENSXMAG00000021276 cebpz (ENSXMAG00000007499) ENSXMAG00000007495 nkx2.4b (ENSXMAG00000007492) #15 xrn2 (ENSXMAG00000000242) #16 ENSXMAG00000025623 ENSXMAG00000000240 CFAP61 (ENSXMAG00000006876) #21 ENSXMAG00000029303 crnkl1 (ENSXMAG00000006896) #22 naa20 (ENSXMAG00000006917) #23 ENSXMAG00000028473 ENSXMAG00000027111 COX7A2 (ENSXMAG00000004499) tmem30ab (ENSXMAG00000004504) FILIP1 (ENSXMAG00000004513) SLC35D3 (ENSXMAG00000025070) pex7 (ENSXMAG00000004526) ENSXMAG00000021630 ENSXMAG00000024970 ENSXMAG00000021778 syncrip (ENSXMAG00000004553) ENSXMAG00000004575 ENSXMAG00000021613 flvcr1 (ENSXMAG00000004587) Aplocheiloidei ANCESTRAL SPECIES 251 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00940000154550.a Mangrove rivulus MODERN SPECIES 867 ENSKMAG00000003671 crnkl1 (ENSKMAG00000003620) #22 naa20 (ENSKMAG00000003598) #23 Turquoise killifish MODERN SPECIES 1613 ENSNFUG00015009247 ENSNFUG00015009240 OLA.26838 (ENSNFUG00015009231) prkrip1 (ENSNFUG00015009199) GLRX5 (ENSNFUG00015009180) INTS9 (ENSNFUG00015009113) pla2g7 (ENSNFUG00015009028) tdrd6 (ENSNFUG00015008988) SF3B14 (ENSNFUG00015014561) VSNL1B (ENSNFUG00015014547) ENSNFUG00015014523 ENSNFUG00015014510 nkx2.4b (ENSNFUG00015014490) #15 XRN2 (ENSNFUG00015014399) #16 ENSNFUG00015014370 crnkl1 (ENSNFUG00015014281) #22 NAA20 (ENSNFUG00015014255) #23 CABZ01081490.1 (ENSNFUG00015014243) COL12A1 (ENSNFUG00015013861) ENSNFUG00015013807 CEBPZOS (ENSNFUG00015013797) CEBPZ (ENSNFUG00015013734) BUB1 (ENSNFUG00015013714) HEY2 (ENSNFUG00015013700) ENSNFUG00015013694 pex7 (ENSNFUG00015013683) SLC35D3 (ENSNFUG00015013676) ENSNFUG00015013658 MYT1LA (ENSNFUG00015013625) RNASEH1 (ENSNFUG00015013611) rps7 (ENSNFUG00015013584) Ovalentaria_B ANCESTRAL SPECIES 17 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b Cichlidae ANCESTRAL SPECIES 12 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00940000155926.e ENSGT00940000154923.C.x ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00940000155926.e ENSGT00940000154923.C.x.a.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00940000155926.e ENSGT00940000154923.C.x.a.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Haplochromini ANCESTRAL SPECIES 13 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00940000155926.e ENSGT00940000154923.C.x.a.b ENSGT01000000216907 ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Haplochromini_A ANCESTRAL SPECIES 11 ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00940000155926.e ENSGT00940000154923.C.x.a.b ENSGT01000000216907 ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b Haplochromini_B ANCESTRAL SPECIES 49 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00950000183173.S.ab.d.b.o.a.b ENSGT00940000155926.e ENSGT00940000154923.C.x.a.b ENSGT00940000154923.C.x.a.a ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b.c Eastern happy MODERN SPECIES 6 brox (ENSACLG00000009591) ENSACLG00000009620 ENSACLG00000009624 ENSACLG00000009628 ENSACLG00000009629 ENSACLG00000009633 cd2ap (ENSACLG00000010066) opn5 (ENSACLG00000010092) ENSACLG00000010450 #13 nkx2.2b (ENSACLG00000010492) #14 NKX2-4 (ENSACLG00000010500) #15 xrn2 (ENSACLG00000010522) #16 ENSACLG00000010669 insm1a (ENSACLG00000010686) #20 CFAP61 (ENSACLG00000010755) #21 crnkl1 (ENSACLG00000010813) #22 naa20 (ENSACLG00000010918) #23 COL12A1 (ENSACLG00000010948) ENSACLG00000011356 ENSACLG00000011511 ENSACLG00000011520 ENSACLG00000011551 ENSACLG00000011612 COX7A2 (ENSACLG00000011633) tmem30ab (ENSACLG00000011641) FILIP1 (ENSACLG00000011663) SENP6 (ENSACLG00000011853) myo6a (ENSACLG00000011938) ENSACLG00000012091 HTR1B (ENSACLG00000012125) mei4 (ENSACLG00000012141) Zebra mbuna MODERN SPECIES 3 nkx2.2b (ENSMZEG00005022371) #14 ENSMZEG00005022368 #13 NKX2-4 (ENSMZEG00005022367) #15 xrn2 (ENSMZEG00005022362) #16 ENSMZEG00005022358 insm1a (ENSMZEG00005022355) #20 CFAP61 (ENSMZEG00005022350) #21 crnkl1 (ENSMZEG00005022345) #22 naa20 (ENSMZEG00005022344) #23 ENSMZEG00005022304 ENSMZEG00005022288 ENSMZEG00005022283 ENSMZEG00005022280 ENSMZEG00005022277 ENSMZEG00005022274 tmem30ab (ENSMZEG00005022269) FILIP1 (ENSMZEG00005022266) SENP6 (ENSMZEG00005022261) myo6a (ENSMZEG00005022248) ENSMZEG00005022245 IMPG1 (ENSMZEG00005022242) HTR1B (ENSMZEG00005022240) mei4 (ENSMZEG00005022239) P. nyererei MODERN SPECIES 343 rps7 (ENSPNYG00000001303) ENSPNYG00000001347 cnksr3 (ENSPNYG00000001359) PRKD3 (ENSPNYG00000001394) ndufaf7 (ENSPNYG00000001451) cebpz (ENSPNYG00000001483) CEBPZOS (ENSPNYG00000001546) FOXA2 (ENSPNYG00000001551) #12 ENSPNYG00000001573 #13 nkx2.2b (ENSPNYG00000001616) #14 nkx2.4b (ENSPNYG00000001669) #15 xrn2 (ENSPNYG00000001765) #16 ENSPNYG00000001923 ENSPNYG00000001931 ENSPNYG00000001963 crnkl1 (ENSPNYG00000001977) #22 naa20 (ENSPNYG00000002034) #23 COL12A1 (ENSPNYG00000002128) ENSPNYG00000002715 COX7A2 (ENSPNYG00000002783) tmem30ab (ENSPNYG00000002796) FILIP1 (ENSPNYG00000002825) ENSPNYG00000002830 ENSPNYG00000002844 myo6a (ENSPNYG00000002894) IMPG1 (ENSPNYG00000002998) ENSPNYG00000003088 HTR1B (ENSPNYG00000003100) mei4 (ENSPNYG00000003126) NT5E (ENSPNYG00000003145) snx14 (ENSPNYG00000003182) Burton s mouthbrooder MODERN SPECIES 381 PRKD3 (ENSHBUG00000004832) ndufaf7 (ENSHBUG00000004893) cebpz (ENSHBUG00000004917) CEBPZOS (ENSHBUG00000004938) FOXA2 (ENSHBUG00000004947) #12 ENSHBUG00000004966 ENSHBUG00000004973 #13 nkx2.2b (ENSHBUG00000004988) #14 NKX2-4 (ENSHBUG00000004995) #15 xrn2 (ENSHBUG00000005077) #16 ENSHBUG00000005100 insm1a (ENSHBUG00000005119) #20 ENSHBUG00000005169 #21 ENSHBUG00000005182 naa20 (ENSHBUG00000005221) #23 crnkl1 (ENSHBUG00000005246) #22 COL12A1 (ENSHBUG00000005956) Lyretail cichlid MODERN SPECIES 318 ENSNBRG00000008655 cnksr3 (ENSNBRG00000008617) PRKD3 (ENSNBRG00000008562) CEBPZOS (ENSNBRG00000008542) cebpz (ENSNBRG00000008466) FOXA2 (ENSNBRG00000008439) #12 ndufaf7 (ENSNBRG00000008402) ENSNBRG00000008377 ENSNBRG00000008357 nkx2.2b (ENSNBRG00000008315) #14 NKX2-4 (ENSNBRG00000008244) #15 xrn2 (ENSNBRG00000008062) #16 ENSNBRG00000008008 insm1a (ENSNBRG00000007998) #20 CFAP61 (ENSNBRG00000007937) #21 crnkl1 (ENSNBRG00000007867) #22 naa20 (ENSNBRG00000007829) #23 COL12A1 (ENSNBRG00000007056) ENSNBRG00000006887 ENSNBRG00000006868 COX7A2 (ENSNBRG00000006857) tmem30ab (ENSNBRG00000006845) FILIP1 (ENSNBRG00000006832) ENSNBRG00000006801 myo6a (ENSNBRG00000006708) IMPG1 (ENSNBRG00000006641) HTR1B (ENSNBRG00000006610) mei4 (ENSNBRG00000006587) NT5E (ENSNBRG00000006409) snx14 (ENSNBRG00000006312) syncrip (ENSNBRG00000006270) Nile tilapia MODERN SPECIES 6 ENSONIG00000032626 cnksr3 (ENSONIG00000018699) PRKD3 (ENSONIG00000018702) ndufaf7 (ENSONIG00000018707) cebpz (ENSONIG00000018713) CEBPZOS (ENSONIG00000042051) FOXA2 (ENSONIG00000018714) #12 ENSONIG00000029824 ENSONIG00000018717 #13 nkx2.2b (ENSONIG00000018719) #14 NKX2-4 (ENSONIG00000018724) #15 xrn2 (ENSONIG00000018720) #16 ENSONIG00000036395 insm1a (ENSONIG00000021258) #20 CFAP61 (ENSONIG00000018725) #21 crnkl1 (ENSONIG00000018728) #22 naa20 (ENSONIG00000018731) #23 COL12A1 (ENSONIG00000018733) ENSONIG00000018735 ENSONIG00000018739 ENSONIG00000034698 COX7A2 (ENSONIG00000018741) tmem30ab (ENSONIG00000018743) FILIP1 (ENSONIG00000018745) SENP6 (ENSONIG00000018746) ENSONIG00000018748 IMPG1 (ENSONIG00000018753) ENSONIG00000039785 HTR1B (ENSONIG00000021259) mei4 (ENSONIG00000018756) NT5E (ENSONIG00000018757) Midas cichlid MODERN SPECIES 275 rps7 (ENSACIG00000014684) cnksr3 (ENSACIG00000014733) PRKD3 (ENSACIG00000014766) ndufaf7 (ENSACIG00000014817) cebpz (ENSACIG00000014854) CEBPZOS (ENSACIG00000014887) FOXA2 (ENSACIG00000014897) #12 ENSACIG00000014913 ENSACIG00000014922 #13 nkx2.2b (ENSACIG00000014940) #14 NKX2-4 (ENSACIG00000014955) #15 xrn2 (ENSACIG00000015047) #16 ENSACIG00000015159 insm1a (ENSACIG00000015169) #20 CFAP61 (ENSACIG00000015182) #21 crnkl1 (ENSACIG00000015267) #22 naa20 (ENSACIG00000015305) #23 COL12A1 (ENSACIG00000015334) ENSACIG00000015466 Pomacentridae ANCESTRAL SPECIES 104 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395.b ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000159727 #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000177253 Pomacentridae_A ANCESTRAL SPECIES 102 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395.b ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000159727 #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r Amphiprion ANCESTRAL SPECIES 202 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395.b ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000159727 #14 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00940000165336.a.a.a.h.a.a ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b Orange clownfish MODERN SPECIES 2 cnksr3 (ENSAPEG00000014514) PRKD3 (ENSAPEG00000014535) ndufaf7 (ENSAPEG00000014630) cebpz (ENSAPEG00000014644) CEBPZOS (ENSAPEG00000014667) FOXA2 (ENSAPEG00000014681) #12 ENSAPEG00000014701 #13 nkx2.2b (ENSAPEG00000014723) #14 NKX2-4 (ENSAPEG00000014773) #15 xrn2 (ENSAPEG00000014871) #16 ENSAPEG00000014898 ENSAPEG00000014912 insm1a (ENSAPEG00000014929) #20 ENSAPEG00000014944 #21 ENSAPEG00000015033 crnkl1 (ENSAPEG00000015041) #22 naa20 (ENSAPEG00000015089) #23 CD109 (ENSAPEG00000015110) ENSAPEG00000015179 COL12A1 (ENSAPEG00000015211) COX7A2 (ENSAPEG00000015434) drc1 (ENSAPEG00000015459) OSTM1 (ENSAPEG00000015496) nr2e1 (ENSAPEG00000015514) snx3 (ENSAPEG00000015537) afg1lb (ENSAPEG00000015567) foxo3b (ENSAPEG00000015580) ARMC2 (ENSAPEG00000015584) sesn1 (ENSAPEG00000015622) cep57l1 (ENSAPEG00000015672) cd164 (ENSAPEG00000015703) Clown anemonefish MODERN SPECIES 2242 ENSAOCG00000021826 ENSAOCG00000001590 insm1a (ENSAOCG00000021863) #20 CFAP61 (ENSAOCG00000021903) #21 crnkl1 (ENSAOCG00000021964) #22 naa20 (ENSAOCG00000021977) #23 ENSAOCG00000001611 Spiny chromis MODERN SPECIES 202 ENSAPOG00000010242 cnksr3 (ENSAPOG00000010210) PRKD3 (ENSAPOG00000010147) ndufaf7 (ENSAPOG00000010062) cebpz (ENSAPOG00000010013) CEBPZOS (ENSAPOG00000009990) FOXA2 (ENSAPOG00000009962) #12 ENSAPOG00000009922 #13 nkx2.2b (ENSAPOG00000009832) #14 NKX2-4 (ENSAPOG00000009822) #15 xrn2 (ENSAPOG00000009818) #16 ENSAPOG00000009796 ENSAPOG00000009773 insm1a (ENSAPOG00000009758) #20 CFAP61 (ENSAPOG00000009739) #21 crnkl1 (ENSAPOG00000009705) #22 naa20 (ENSAPOG00000009624) #23 ENSAPOG00000009613 Bicolor damselfish MODERN SPECIES 1001 ENSSPAG00000015903 #13 nkx2.2b (ENSSPAG00000015916) #14 nkx2.4b (ENSSPAG00000015963) #15 xrn2 (ENSSPAG00000016027) #16 ENSSPAG00000016078 insm1a (ENSSPAG00000016089) #20 ENSSPAG00000016100 #21 ENSSPAG00000016130 crnkl1 (ENSSPAG00000016150) #22 naa20 (ENSSPAG00000016196) #23 ENSSPAG00000016298 ENSSPAG00000017151 Percomorphaceae_C ANCESTRAL SPECIES 19 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000173663 Eupercaria ANCESTRAL SPECIES 16 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000177253 Tetraodontidae ANCESTRAL SPECIES 36 ENSGT00940000156512.b.b ENSGT00940000155734.mb.b ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000168150.b ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000157865 ENSGT00390000009312.a Tetraodon MODERN SPECIES 5 tmem134 (ENSTNIG00000019662) pex3 (ENSTNIG00000003887) ENSTNIG00000003888 AIG1 (ENSTNIG00000003889) hivep2a (ENSTNIG00000010718) ENSTNIG00000010717 myt1la (ENSTNIG00000010716) ENSTNIG00000000215 rnaseh1 (ENSTNIG00000010715) rps7 (ENSTNIG00000010714) NKX2-8 (ENSTNIG00000010813) nkx2.4b (ENSTNIG00000010713) #15 xrn2 (ENSTNIG00000010712) #16 insm1a (ENSTNIG00000001062) #20 CFAP61 (ENSTNIG00000010711) #21 crnkl1 (ENSTNIG00000010710) #22 naa20 (ENSTNIG00000010709) #23 ENSTNIG00000010708 CD109 (ENSTNIG00000010707) COL12A1 (ENSTNIG00000010706) COX7A2 (ENSTNIG00000010705) FILIP1 (ENSTNIG00000010704) ENSTNIG00000010703 ENSTNIG00000002816 IMPG1 (ENSTNIG00000002817) HTR1B (ENSTNIG00000002818) NT5E (ENSTNIG00000002819) snx14 (ENSTNIG00000002820) syncrip (ENSTNIG00000002821) ENSTNIG00000002822 glo1 (ENSTNIG00000002823) Fugu MODERN SPECIES 7 ENSTRUG00000033266 rnaseh1 (ENSTRUG00000015774) rps7 (ENSTRUG00000015750) cnksr3 (ENSTRUG00000015727) PRKD3 (ENSTRUG00000015635) ndufaf7 (ENSTRUG00000015621) cebpz (ENSTRUG00000015584) CEBPZOS (ENSTRUG00000024899) FOXA2 (ENSTRUG00000015568) #12 ENSTRUG00000015566 NKX2-4 (ENSTRUG00000024656) #15 xrn2 (ENSTRUG00000015489) #16 ENSTRUG00000032230 ENSTRUG00000026779 insm1a (ENSTRUG00000025179) #20 crnkl1 (ENSTRUG00000015417) #22 naa20 (ENSTRUG00000015405) #23 ENSTRUG00000015398 COX7A2 (ENSTRUG00000032143) FILIP1 (ENSTRUG00000015292) SENP6 (ENSTRUG00000015282) IMPG1 (ENSTRUG00000015018) ENSTRUG00000031999 HTR1B (ENSTRUG00000033288) NT5E (ENSTRUG00000014965) snx14 (ENSTRUG00000014825) syncrip (ENSTRUG00000014766) ENSTRUG00000014663 glo1 (ENSTRUG00000020714) hey2 (ENSTRUG00000026892) ENSTRUG00000025817 Eupecaria_A ANCESTRAL SPECIES 16 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000177253 Ballan wrasse MODERN SPECIES 1385 ENSLBEG00000003522 crnkl1 (ENSLBEG00000003543) #22 naa20 (ENSLBEG00000003596) #23 ENSLBEG00000003632 Eupecaria_B ANCESTRAL SPECIES 16 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000177253 Eupecaria_C ANCESTRAL SPECIES 16 ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000157865 ENSGT00390000009312.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 11 ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 Large yellow croaker MODERN SPECIES 482 unc93a (ENSLCRG00005021460) PRKD3 (ENSLCRG00005021464) ndufaf7 (ENSLCRG00005021662) cebpz (ENSLCRG00005021678) CEBPZOS (ENSLCRG00005021682) FOXA2 (ENSLCRG00005021683) #12 ENSLCRG00005021684 #13 ENSLCRG00005021685 NKX2-4 (ENSLCRG00005021686) #15 xrn2 (ENSLCRG00005021695) #16 ENSLCRG00005002438 insm1a (ENSLCRG00005002446) #20 ENSLCRG00005002455 #21 ENSLCRG00005002466 #21 ENSLCRG00005002479 crnkl1 (ENSLCRG00005002522) #22 naa20 (ENSLCRG00005003557) #23 mfsd4b (ENSLCRG00005003558) REV3L (ENSLCRG00005003560) ENSLCRG00005003564 ENSLCRG00005003565 FYN (ENSLCRG00005003575) ENSLCRG00005003657 tube1 (ENSLCRG00005003661) ccn6 (ENSLCRG00005003662) ENSLCRG00005003676 ENSLCRG00005004175 ENSLCRG00005004180 ENSLCRG00005004182 ENSLCRG00005004185 marcksa (ENSLCRG00005004187) European seabass MODERN SPECIES 7 rnaseh1 (ENSDLAG00005029864) ENSDLAG00005031142 PRKD3 (ENSDLAG00005013799) NDUFAF7 (ENSDLAG00005013743) CEBPZ (ENSDLAG00005013735) CEBPZOS (ENSDLAG00005027844) ENSDLAG00005026391 #12 ENSDLAG00005013711 #13 ENSDLAG00005034207 ENSDLAG00005013707 ENSDLAG00005013702 #15 ENSDLAG00005013567 #16 ENSDLAG00005013546 INSM1 (ENSDLAG00005031184) #20 CFAP61 (ENSDLAG00005013504) #21 CRNKL1 (ENSDLAG00005013275) #22 NAA20 (ENSDLAG00005013248) #23 ENSDLAG00005013221 ENSDLAG00005013185 ENSDLAG00005013180 ENSDLAG00005013140 ENSDLAG00005027694 ENSDLAG00005012103 ENSDLAG00005012035 ENSDLAG00005011486 GPR6 (ENSDLAG00005011450) ENSDLAG00005011436 ENSDLAG00005011407 WASF1 (ENSDLAG00005011390) ENSDLAG00005011348 METTL24 (ENSDLAG00005011337) Gilthead seabream MODERN SPECIES 14 rps7 (ENSSAUG00010019007) ENSSAUG00010019005 cnksr3 (ENSSAUG00010019004) PRKD3 (ENSSAUG00010018517) ndufaf7 (ENSSAUG00010018502) cebpz (ENSSAUG00010018499) CEBPZOS (ENSSAUG00010018497) FOXA2 (ENSSAUG00010018494) #12 ENSSAUG00010018493 #13 nkx2.2b (ENSSAUG00010018492) #14 NKX2-4 (ENSSAUG00010018491) #15 xrn2 (ENSSAUG00010014494) #16 ENSSAUG00010014388 insm1a (ENSSAUG00010014387) #20 CFAP61 (ENSSAUG00010014384) #21 crnkl1 (ENSSAUG00010014041) #22 naa20 (ENSSAUG00010014017) #23 CD109 (ENSSAUG00010014007) COL12A1 (ENSSAUG00010007916) COX7a2 (ENSSAUG00010007755) ENSSAUG00010007752 tmem30ab (ENSSAUG00010007746) FILIP1 (ENSSAUG00010007738) SENP6 (ENSSAUG00010007718) myo6a (ENSSAUG00010007667) ENSSAUG00010007655 HTR1B (ENSSAUG00010007652) mei4 (ENSSAUG00010007650) NT5E (ENSSAUG00010007022) snx14 (ENSSAUG00010003879) syncrip (ENSSAUG00010003340) Perciformes ANCESTRAL SPECIES 14 ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000177253 ENSGT00940000157865 Cottioidei ANCESTRAL SPECIES 46 ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00940000154484.B.a.b ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000164311 Stickleback MODERN SPECIES 18 hivep2a (ENSGACG00000011974) ENSGACG00000011966 myt1la (ENSGACG00000011952) rnaseh1 (ENSGACG00000011935) rps7 (ENSGACG00000011913) cnksr3 (ENSGACG00000011904) ENSGACG00000011900 ndufaf7 (ENSGACG00000011895) ENSGACG00000011887 #21 ENSGACG00000011882 xrn2 (ENSGACG00000011870) #16 ENSGACG00000011866 FOXA2 (ENSGACG00000011863) #12 ENSGACG00000011860 cebpz (ENSGACG00000011855) crnkl1 (ENSGACG00000011852) #22 naa20 (ENSGACG00000011837) #23 COL12A1 (ENSGACG00000011819) COX7A2 (ENSGACG00000011811) tmem30ab (ENSGACG00000011780) FILIP1 (ENSGACG00000011776) ENSGACG00000011768 ENSGACG00000011766 ENSGACG00000011732 IMPG1 (ENSGACG00000011724) htr1b (ENSGACG00000011716) mei4 (ENSGACG00000011715) NT5E (ENSGACG00000011712) snx14 (ENSGACG00000011674) syncrip (ENSGACG00000011665) EPM2A (ENSGACG00000011656) Lumpfish MODERN SPECIES 16 snx14 (ENSCLMG00005011301) syncrip (ENSCLMG00005011706) SYNCRIP (ENSCLMG00005011749) NDUFAF7 (ENSCLMG00005011750) CEBPZ (ENSCLMG00005011751) CEBPZOS (ENSCLMG00005011752) FOXA2 (ENSCLMG00005011753) #12 ENSCLMG00005011754 #13 nkx2.2b (ENSCLMG00005011755) #14 NKX2-4 (ENSCLMG00005011760) #15 xrn2 (ENSCLMG00005011775) #16 ENSCLMG00005011779 INSM1 (ENSCLMG00005011780) #20 ENSCLMG00005011781 #21 ENSCLMG00005011782 crnkl1 (ENSCLMG00005011783) #22 ENSCLMG00005011825 ENSCLMG00005011826 ENSCLMG00005011828 ENSCLMG00005011829 ENSCLMG00005011830 ENSCLMG00005011832 NDUFAF7 (ENSCLMG00005011833) ENSCLMG00005011839 ENSCLMG00005011843 cnksr3 (ENSCLMG00005011864) rps7 (ENSCLMG00005011865) rnaseh1 (ENSCLMG00005011874) ENSCLMG00005011876 ENSCLMG00005011877 ENSCLMG00005011878 Perciformes_a ANCESTRAL SPECIES 15 ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00940000177839 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000173663 ENSGT00940000153511.b.r ENSGT00940000177253 ENSGT00940000157865 ENSGT00390000009312.a Pike perch MODERN SPECIES 95 PRKD3 (ENSSLUG00000014993) ndufaf7 (ENSSLUG00000015698) ENSSLUG00000015807 CEBPZ (ENSSLUG00000015814) ENSSLUG00000015821 ENSSLUG00000015829 FOXA2 (ENSSLUG00000015835) #12 ENSSLUG00000015842 #13 ENSSLUG00000015855 nkx2.2b (ENSSLUG00000015864) #14 NKX2-4 (ENSSLUG00000015878) #15 xrn2 (ENSSLUG00000015942) #16 ENSSLUG00000016070 insm1a (ENSSLUG00000016074) #20 CFAP61 (ENSSLUG00000016082) #21 crnkl1 (ENSSLUG00000016133) #22 naa20 (ENSSLUG00000016662) #23 ENSSLUG00000016671 COL12A1 (ENSSLUG00000016822) COX7A2 (ENSSLUG00000019375) ENSSLUG00000019377 TMEM30A (ENSSLUG00000019380) FILIP1 (ENSSLUG00000019387) SENP6 (ENSSLUG00000019389) myo6a (ENSSLUG00000019495) ENSSLUG00000021773 HTR1B (ENSSLUG00000021787) mei4 (ENSSLUG00000021793) ENSSLUG00000021804 ENSSLUG00000021815 NT5E (ENSSLUG00000021826) Channel bull blenny MODERN SPECIES 16 ENSCGOG00000019778 PRKD3 (ENSCGOG00000018726) ndufaf7 (ENSCGOG00000018668) ENSCGOG00000018666 cebpz (ENSCGOG00000018658) FOXA2 (ENSCGOG00000018655) #12 ENSCGOG00000018651 #13 nkx2.2b (ENSCGOG00000018649) #14 NKX2-4 (ENSCGOG00000018647) #15 ENSCGOG00000018646 xrn2 (ENSCGOG00000017938) #16 ENSCGOG00000017907 ENSCGOG00000017906 ENSCGOG00000017905 ENSCGOG00000017901 #21 crnkl1 (ENSCGOG00000017743) #22 naa20 (ENSCGOG00000017899) #23 ENSCGOG00000017741 COX7A2 (ENSCGOG00000017642) tmem30aa (ENSCGOG00000017598) FILIP1 (ENSCGOG00000017596) ENSCGOG00000017594 SENP6 (ENSCGOG00000017588) ENSCGOG00000017582 ENSCGOG00000017569 ENSCGOG00000017566 ENSCGOG00000017527 myo6a (ENSCGOG00000014321) ENSCGOG00000014219 IMPG1 (ENSCGOG00000014194) ENSCGOG00000014190 Percomorphaceae_D ANCESTRAL SPECIES 18 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r Carangaria ANCESTRAL SPECIES 18 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00940000177839 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r Pleuronectoidei ANCESTRAL SPECIES 11 ENSGT00940000155671.y.b ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00940000177839 ENSGT00390000006395 ENSGT00940000155999.e.b #12 ENSGT00940000166323 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000173663 ENSGT00940000153511.b.r Turbot MODERN SPECIES 12 hivep2a (ENSSMAG00000007354) ENSSMAG00000035695 myt1la (ENSSMAG00000007419) ENSSMAG00000007586 rps7 (ENSSMAG00000007610) ENSSMAG00000007652 PRKD3 (ENSSMAG00000007683) ENSSMAG00000007736 CEBPZ (ENSSMAG00000007770) ENSSMAG00000007814 #12 xrn2 (ENSSMAG00000007834) #16 ENSSMAG00000030883 nkx2.4b (ENSSMAG00000007829) #15 ENSSMAG00000030870 CFAP61 (ENSSMAG00000007892) #21 crnkl1 (ENSSMAG00000007933) #22 naa20 (ENSSMAG00000007953) #23 CD109 (ENSSMAG00000007989) COL12A1 (ENSSMAG00000008027) COX7A2 (ENSSMAG00000029953) TMEM30A (ENSSMAG00000008297) FILIP1 (ENSSMAG00000008318) myo6a (ENSSMAG00000008405) IMPG1 (ENSSMAG00000009003) HTR1B (ENSSMAG00000009051) mei4 (ENSSMAG00000009063) NT5E (ENSSMAG00000009079) snx14 (ENSSMAG00000009094) ENSSMAG00000037559 SYNCRIP (ENSSMAG00000009154) ENSSMAG00000009179 Tongue sole MODERN SPECIES 17 ENSCSEG00000005774 rnaseh1 (ENSCSEG00000005741) rps7 (ENSCSEG00000005714) cnksr3 (ENSCSEG00000005699) PRKD3 (ENSCSEG00000005685) ndufaf7 (ENSCSEG00000005676) ENSCSEG00000005672 cebpz (ENSCSEG00000005661) ENSCSEG00000005656 nkx2.4b (ENSCSEG00000005646) #15 ENSCSEG00000005637 #16 xrn2 (ENSCSEG00000005628) #16 ENSCSEG00000005620 insm1a (ENSCSEG00000005602) #20 ENSCSEG00000005601 #21 crnkl1 (ENSCSEG00000005594) #22 naa20 (ENSCSEG00000005589) #23 CD109 (ENSCSEG00000005547) COL12A1 (ENSCSEG00000005490) tmem30ab (ENSCSEG00000005476) COX7A2 (ENSCSEG00000005422) ENSCSEG00000005378 ENSCSEG00000005370 ENSCSEG00000005367 SLC35D3 (ENSCSEG00000005363) ENSCSEG00000005359 pex7 (ENSCSEG00000005354) hey2 (ENSCSEG00000005347) ENSCSEG00000005325 ENSCSEG00000005151 ENSCSEG00000004945 Carangaria_A ANCESTRAL SPECIES 35 ENSGT00390000014122.d ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00940000177839 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r Barramundi perch MODERN SPECIES 446 FOXA2 (ENSLCAG00010025007) #12 ENSLCAG00010025010 #13 nkx2.2b (ENSLCAG00010025013) #14 nkx2.4b (ENSLCAG00010025024) #15 xrn2 (ENSLCAG00010025068) #16 ENSLCAG00010025101 insm1a (ENSLCAG00010025104) #20 CFAP61 (ENSLCAG00010025109) #21 crnkl1 (ENSLCAG00010025130) #22 naa20 (ENSLCAG00010025154) #23 naa20 (ENSLCAG00010025168) #23 ENSLCAG00010025199 Seriola ANCESTRAL SPECIES 4 ENSGT00390000014122.d ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00940000177839 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT00530000063503.a.b.g.a.f ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r Yellowtail amberjack MODERN SPECIES 3234 ENSSLDG00000020979 ENSSLDG00000020996 PRKD3 (ENSSLDG00000021084) ndufaf7 (ENSSLDG00000021146) cebpz (ENSSLDG00000021173) CEBPZOS (ENSSLDG00000021230) FOXA2 (ENSSLDG00000021235) #12 ENSSLDG00000021238 #13 nkx2.2b (ENSSLDG00000021256) #14 NKX2-4 (ENSSLDG00000021261) #15 xrn2 (ENSSLDG00000021273) #16 ENSSLDG00000021355 insm1a (ENSSLDG00000021365) #20 ENSSLDG00000021373 #21 ENSSLDG00000021401 crnkl1 (ENSSLDG00000021413) #22 naa20 (ENSSLDG00000021480) #23 CD109 (ENSSLDG00000021491) COL12A1 (ENSSLDG00000021536) COX7A2 (ENSSLDG00000021623) tmem30ab (ENSSLDG00000021631) FILIP1 (ENSSLDG00000021653) SENP6 (ENSSLDG00000021665) myo6a (ENSSLDG00000021704) ENSSLDG00000021743 ENSSLDG00000021748 HTR1B (ENSSLDG00000021754) mei4 (ENSSLDG00000021760) NT5E (ENSSLDG00000021780) snx14 (ENSSLDG00000021816) syncrip (ENSSLDG00000021848) Greater amberjack MODERN SPECIES 10 ENSSDUG00000013145 ENSSDUG00000013134 PRKD3 (ENSSDUG00000013089) ndufaf7 (ENSSDUG00000013053) ENSSDUG00000013045 cebpz (ENSSDUG00000013019) FOXA2 (ENSSDUG00000013011) #12 ENSSDUG00000012999 #13 nkx2.2b (ENSSDUG00000012989) #14 NKX2-4 (ENSSDUG00000012986) #15 xrn2 (ENSSDUG00000012802) #16 ENSSDUG00000012767 insm1a (ENSSDUG00000012757) #20 CFAP61 (ENSSDUG00000012661) #21 crnkl1 (ENSSDUG00000012625) #22 naa20 (ENSSDUG00000012606) #23 CD109 (ENSSDUG00000011943) COL12A1 (ENSSDUG00000011338) COX7A2 (ENSSDUG00000011255) tmem30ab (ENSSDUG00000011227) FILIP1 (ENSSDUG00000011210) SENP6 (ENSSDUG00000011187) myo6a (ENSSDUG00000011138) ENSSDUG00000011115 ENSSDUG00000011101 HTR1B (ENSSDUG00000011090) NT5E (ENSSDUG00000011024) snx14 (ENSSDUG00000010870) ENSSDUG00000010849 syncrip (ENSSDUG00000010798) Anabantaria ANCESTRAL SPECIES 24 ENSGT00390000003466 ENSGT00390000014122 ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000154550.a ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.e ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r ENSGT00940000177253 Zig-zag eel MODERN SPECIES 16 ENSMAMG00000026833 PRKD3 (ENSMAMG00000019782) NDUFAF7 (ENSMAMG00000019800) CEBPZ (ENSMAMG00000019826) CEBPZOS (ENSMAMG00000019833) ENSMAMG00000019846 ENSMAMG00000019851 #12 nkx2.2b (ENSMAMG00000019854) #14 ENSMAMG00000008594 #15 xrn2 (ENSMAMG00000008633) #16 ENSMAMG00000008675 ENSMAMG00000008678 INSM1 (ENSMAMG00000008707) #20 ENSMAMG00000008717 #21 ENSMAMG00000008745 crnkl1 (ENSMAMG00000008757) #22 naa20 (ENSMAMG00000008766) #23 CD109 (ENSMAMG00000008795) ENSMAMG00000026336 COL12A1 (ENSMAMG00000008858) COX7A2 (ENSMAMG00000026109) TMEM30A (ENSMAMG00000009381) FILIP1 (ENSMAMG00000009424) SENP6 (ENSMAMG00000009438) MYO6 (ENSMAMG00000009463) ENSMAMG00000009543 HTR1B (ENSMAMG00000009703) Anabantoidei ANCESTRAL SPECIES 15 ENSGT00940000155724.r ENSGT00950000182852.A.a.a.a ENSGT00390000004660.C.a.a.d ENSGT00940000154550.a ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00500000045333 ENSGT00940000155999.e.b #12 ENSGT00940000159137.a #13 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00940000163429.C ENSGT00390000014122 ENSGT00390000003466 ENSGT00940000155671.y.b ENSGT00940000155734.mb.a ENSGT00940000156512.b.b ENSGT00940000158696 ENSGT00940000164335 ENSGT00940000165183 ENSGT00940000156376 ENSGT00940000161120 ENSGT00940000178942 Climbing perch MODERN SPECIES 15 FILIP1 (ENSATEG00000028309) TMEM30A (ENSATEG00000029827) COX7A2 (ENSATEG00000027276) PRKD3 (ENSATEG00000001636) NDUFAF7 (ENSATEG00000001621) CEBPZ (ENSATEG00000001538) CEBPZOS (ENSATEG00000029501) ENSATEG00000029894 #12 ENSATEG00000001430 #13 nkx2.2b (ENSATEG00000001390) #14 ENSATEG00000001285 #15 xrn2 (ENSATEG00000001273) #16 ENSATEG00000028183 INSM1 (ENSATEG00000001248) #20 CFAP61 (ENSATEG00000001144) #21 crnkl1 (ENSATEG00000001068) #22 naa20 (ENSATEG00000026382) #23 ENSATEG00000000953 ENSATEG00000000699 ENSATEG00000000692 ENSATEG00000000644 rps7 (ENSATEG00000027580) ENSATEG00000000598 myt1la (ENSATEG00000000509) ENSATEG00000000503 ENSATEG00000028915 hivep2a (ENSATEG00000000413) ENSATEG00000000377 ENSATEG00000000316 pex3 (ENSATEG00000000247) atf3 (ENSATEG00000000223) Siamese fighting fish MODERN SPECIES 13 tmem30ab (ENSBSLG00000011366) ENSBSLG00000011361 PRKD3 (ENSBSLG00000011152) ndufaf7 (ENSBSLG00000011121) cebpz (ENSBSLG00000011061) CEBPZOS (ENSBSLG00000011045) FOXA2 (ENSBSLG00000011033) #12 ENSBSLG00000011001 #13 nkx2.2b (ENSBSLG00000010992) #14 NKX2-4 (ENSBSLG00000010987) #15 xrn2 (ENSBSLG00000010798) #16 ENSBSLG00000010750 insm1a (ENSBSLG00000010738) #20 ENSBSLG00000010682 CFAP61 (ENSBSLG00000010607) #21 crnkl1 (ENSBSLG00000009842) #22 naa20 (ENSBSLG00000009801) #23 ENSBSLG00000009786 COL12A1 (ENSBSLG00000006994) cnksr3 (ENSBSLG00000006503) ENSBSLG00000006470 rps7 (ENSBSLG00000006365) rnaseh1 (ENSBSLG00000006311) myt1la (ENSBSLG00000005712) ENSBSLG00000005629 hivep2a (ENSBSLG00000005581) AIG1 (ENSBSLG00000005552) ENSBSLG00000005459 pex3 (ENSBSLG00000005275) atf3 (ENSBSLG00000005189) batf3 (ENSBSLG00000005157) Tiger tail seahorse MODERN SPECIES 465 eif2b4 (ENSHCOG00000006727) atraid (ENSHCOG00000006717) snx17 (ENSHCOG00000006690) znf513a (ENSHCOG00000006652) ENSHCOG00000006643 ENSHCOG00000006611 FNDC4 (ENSHCOG00000006607) hsf2 (ENSHCOG00000000774) mcm9 (ENSHCOG00000006578) gja1b (ENSHCOG00000006554) ENSHCOG00000006547 ENSHCOG00000006527 ENSHCOG00000006506 insm1a (ENSHCOG00000006459) #20 CFAP61 (ENSHCOG00000006457) #21 crnkl1 (ENSHCOG00000006420) #22 naa20 (ENSHCOG00000006379) #23 Protacanthopterygii ANCESTRAL SPECIES 33 ENSGT00940000155634.q.b ENSGT00940000161252.h ENSGT00940000157012.l ENSGT00940000163429.A ENSGT00940000163429.C ENSGT00950000183024.a.a.b.r ENSGT00390000001588 ENSGT00390000006395 ENSGT00940000177839 ENSGT00940000162247.f #15 ENSGT00670000098098 #16 ENSGT00400000024959 ENSGT00940000162552.a.b #20 ENSGT00390000004987 #21 ENSGT00940000177607 ENSGT00550000074931 #22 ENSGT00550000075046 #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b ENSGT00390000004660.C.a.a.d ENSGT00950000182852.A.a.a.a ENSGT00940000178265 ENSGT00940000155724.r ENSGT00940000156078.d ENSGT00530000063503.a.b.g.a.c ENSGT00530000063503.a.b.g.a.d ENSGT01010000222287.B.b.a.b.b.a ENSGT00390000013856 ENSGT00530000063775.a.a.b ENSGT00950000182856.a.b.b ENSGT00940000153511.b.r Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 152 ENSGT00940000161252.h.l ENSGT00940000157012.l.c ENSGT00940000163429.C.b ENSGT00950000183024.a.a.b.r.b ENSGT00390000001588.p ENSGT00390000006395.j.b ENSGT00940000155999.e.b.b #12 ENSGT00940000159137.b.b.c #13 ENSGT00940000159727.k.a #14 ENSGT00940000162247.f.f #15 ENSGT00670000098098.g #16 ENSGT00400000024959 ENSGT00940000162552.a.b.c #20 ENSGT00390000004987.kb #21 ENSGT00940000177607 ENSGT00550000074931.e #22 ENSGT00550000075046.h #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b.c ENSGT00940000154550.a.wb ENSGT00390000004660.C.a.a.d.b ENSGT00950000182852.A.a.a.a.e ENSGT00940000178265 ENSGT00940000155724.r.i ENSGT00940000156078.d.c ENSGT00530000063503.a.b.g.a.c ENSGT01010000222287.B.b.a.b.b.a.d ENSGT00390000013856 ENSGT00530000063775.a.a.b.a ENSGT00950000182856.a.b.b.a ENSGT00940000153511.b.r.h Salmoninae_a ANCESTRAL SPECIES 23 ENSGT00940000161252.h.l ENSGT00940000157012.l.c ENSGT00940000163429.C.b ENSGT00950000183024.a.a.b.r.b ENSGT00390000001588.p ENSGT00390000006395.j.b ENSGT00940000155999.e.b.b #12 ENSGT00940000159137.b.b.c #13 ENSGT00940000159727.k.a #14 ENSGT00940000162247.f.f #15 ENSGT00670000098098.g #16 ENSGT00400000024959 ENSGT00940000162552.a.b.c #20 ENSGT00390000004987.kb #21 ENSGT00940000177607 ENSGT00550000074931.e #22 ENSGT00550000075046.h #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b.c ENSGT00940000154550.a.wb ENSGT00390000004660.C.a.a.d.b ENSGT00950000182852.A.a.a.a.e ENSGT00940000178265 ENSGT00940000155724.r.i ENSGT00940000156078.d.c ENSGT00530000063503.a.b.g.a.c ENSGT01010000222287.B.b.a.b.b.a.d ENSGT00390000013856 ENSGT00530000063775.a.a.b.a ENSGT00950000182856.a.b.b.a ENSGT00940000153511.b.r.h Salmo ANCESTRAL SPECIES 12 ENSGT00940000161252.h.l ENSGT00940000157012.l.c ENSGT00940000163429.C.b ENSGT00950000183024.a.a.b.r.b ENSGT00390000001588.p ENSGT00390000006395.j.b ENSGT00940000155999.e.b.b #12 ENSGT00940000159137.b.b.c #13 ENSGT00940000159727.k.a #14 ENSGT00940000162247.f.f #15 ENSGT00670000098098.g #16 ENSGT00400000024959 ENSGT00940000162552.a.b.c #20 ENSGT00390000004987.kb #21 ENSGT00940000177607 ENSGT00550000074931.e #22 ENSGT00550000075046.h #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b.c ENSGT00940000154550.a.wb ENSGT00390000004660.C.a.a.d.b ENSGT00950000182852.A.a.a.a.e ENSGT00940000178265 ENSGT00940000155724.r.i ENSGT00940000156078.d.c ENSGT00530000063503.a.b.g.a.c ENSGT01010000222287.B.b.a.b.b.a.d ENSGT00390000013856 ENSGT00530000063775.a.a.b.a ENSGT00950000182856.a.b.b.a ENSGT00940000153511.b.r.h River trout MODERN SPECIES CLDN20 (ENSSTUG00000026989) ENSSTUG00000026876 cnksr3 (ENSSTUG00000026824) PRKD3 (ENSSTUG00000026310) ndufaf7 (ENSSTUG00000026236) CEBPZ (ENSSTUG00000026199) FOXA2 (ENSSTUG00000026182) #12 PAX1 (ENSSTUG00000026174) #13 nkx2.2b (ENSSTUG00000026165) #14 nkx2.4b (ENSSTUG00000026147) #15 xrn2 (ENSSTUG00000025997) #16 ENSSTUG00000049264 insm1a (ENSSTUG00000049262) #20 ENSSTUG00000049255 #21 ENSSTUG00000049252 crnkl1 (ENSSTUG00000049237) #22 naa20 (ENSSTUG00000049230) #23 CD109 (ENSSTUG00000049218) COL12A1 (ENSSTUG00000047877) COX7A2 (ENSSTUG00000047757) TMEM30A (ENSSTUG00000047747) FILIP1 (ENSSTUG00000047741) SENP6 (ENSSTUG00000047702) myo6a (ENSSTUG00000047119) IMPG1 (ENSSTUG00000047071) HTR1B (ENSSTUG00000047061) mei4 (ENSSTUG00000047045) nt5e (ENSSTUG00000046973) snx14 (ENSSTUG00000046601) syncrip (ENSSTUG00000046443) ENSSTUG00000046387 Atlantic salmon MODERN SPECIES 25 arid1b (ENSSSAG00000075859) CLDN20 (ENSSSAG00000102040) TIAM2 (ENSSSAG00000075929) ENSSSAG00000075966 PRKD3 (ENSSSAG00000075988) ENSSSAG00000076174 CEBPZ (ENSSSAG00000076185) FOXA2 (ENSSSAG00000076197) #12 PAX1 (ENSSSAG00000109984) #13 nkx2.2b (ENSSSAG00000116039) #14 nkx2.4b (ENSSSAG00000089853) #15 xrn2 (ENSSSAG00000076213) #16 ENSSSAG00000116873 INSM1 (ENSSSAG00000111736) #20 ENSSSAG00000076257 crnkl1 (ENSSSAG00000070218) #22 naa20 (ENSSSAG00000076414) #23 CD109 (ENSSSAG00000100303) COL12A1 (ENSSSAG00000076478) TMEM30A (ENSSSAG00000077188) FILIP1 (ENSSSAG00000077198) ENSSSAG00000114688 ENSSSAG00000077203 myo6a (ENSSSAG00000077285) ENSSSAG00000078745 HTR1B (ENSSSAG00000078752) mei4 (ENSSSAG00000078756) nt5e (ENSSSAG00000078771) snx14 (ENSSSAG00000078939) SYNCRIP (ENSSSAG00000079138) ENSSSAG00000079189 Oncorhynchus ANCESTRAL SPECIES 25 ENSGT00940000155634.q.b.c ENSGT00940000161252.h.l ENSGT00940000157012.l.c ENSGT00940000163429.C.b ENSGT00950000183024.a.a.b.r.b ENSGT00390000001588.p ENSGT00390000006395.j.b ENSGT00940000155999.e.b.b #12 ENSGT00940000159137.b.b.c #13 ENSGT00940000159727.k.a #14 ENSGT00940000162247.f.f #15 ENSGT00670000098098.g #16 ENSGT00400000024959 ENSGT00940000162552.a.b.c #20 ENSGT00390000004987.kb #21 ENSGT00550000074931.e #22 ENSGT00550000075046.h #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b.c ENSGT00940000154550.a.wb ENSGT00390000004660.C.a.a.d.b ENSGT00950000182852.A.a.a.a.e ENSGT00940000155724.r.i ENSGT00940000156078.d.c ENSGT00530000063503.a.b.g.a.c ENSGT01010000222287.B.b.a.b.b.a.d ENSGT00390000013856 ENSGT00530000063775.a.a.b.a ENSGT00950000182856.a.b.b.a ENSGT00940000153511.b.r.h ENSGT00940000157865.k Rainbow trout MODERN SPECIES 25 CLDN20 (ENSOMYG00000010979) TIAM2 (ENSOMYG00000010992) ENSOMYG00000063404 ENSOMYG00000011010 PRKD3 (ENSOMYG00000011066) ENSOMYG00000011120 CEBPZ (ENSOMYG00000011164) FOXA2 (ENSOMYG00000011219) #12 PAX1 (ENSOMYG00000011229) #13 nkx2.2b (ENSOMYG00000011245) #14 nkx2.1c (ENSOMYG00000058417) #15 xrn2 (ENSOMYG00000011437) #16 ENSOMYG00000074024 ENSOMYG00000056393 ENSOMYG00000010658 crnkl1 (ENSOMYG00000013953) #22 naa20 (ENSOMYG00000013992) #23 CD109 (ENSOMYG00000049290) ENSOMYG00000059119 COL12A1 (ENSOMYG00000014563) COX7A2 (ENSOMYG00000018957) TMEM30A (ENSOMYG00000048151) FILIP1 (ENSOMYG00000018971) ENSOMYG00000065950 SENP6 (ENSOMYG00000000105) myo6a (ENSOMYG00000000404) IMPG1 (ENSOMYG00000000477) HTR1B (ENSOMYG00000000488) mei4 (ENSOMYG00000000501) nt5e (ENSOMYG00000000596) snx14 (ENSOMYG00000000777) Oncorhynchus_a ANCESTRAL SPECIES 17 ENSGT00940000155634.q.b.c ENSGT00940000161252.h.l ENSGT00940000157012.l.c ENSGT00940000163429.C.b ENSGT00950000183024.a.a.b.r.b ENSGT00390000001588.p ENSGT00390000006395.j.b ENSGT00940000155999.e.b.b #12 ENSGT00940000159137.b.b.c #13 ENSGT00940000159727.k.a #14 ENSGT00940000162247.f.f #15 ENSGT00670000098098.g #16 ENSGT00400000024959 ENSGT00940000162552.a.b.c #20 ENSGT00390000004987.kb #21 ENSGT00550000074931.e #22 ENSGT00550000075046.h #23 ENSGT00940000155926.e ENSGT00940000154923.C.w.b.c ENSGT00940000154550.a.wb ENSGT00390000004660.C.a.a.d.b ENSGT00950000182852.A.a.a.a.e ENSGT00940000155724.r.i ENSGT00940000156078.d.c ENSGT00530000063503.a.b.g.a.c ENSGT01010000222287.B.b.a.b.b.a.d ENSGT00390000013856 ENSGT00530000063775.a.a.b.a ENSGT00950000182856.a.b.b.a ENSGT00940000153511.b.r.h ENSGT00940000157865.k Coho salmon MODERN SPECIES 13 CLDN20 (ENSOKIG00005037936) TIAM2 (ENSOKIG00005037962) ENSOKIG00005038262 ENSOKIG00005038496 CEBPZ (ENSOKIG00005041953) FOXA2 (ENSOKIG00005042182) #12 PAX1 (ENSOKIG00005042225) #13 nkx2.2b (ENSOKIG00005042283) #14 nkx2.4b (ENSOKIG00005042296) #15 xrn2 (ENSOKIG00005042333) #16 ENSOKIG00005042487 INSM1 (ENSOKIG00005042493) #20 ENSOKIG00005042500 #21 ENSOKIG00005042540 ENSOKIG00005042544 crnkl1 (ENSOKIG00005042567) #22 naa20 (ENSOKIG00005043041) #23 CD109 (ENSOKIG00005043093) COL12A1 (ENSOKIG00005043212) COX7A2 (ENSOKIG00005044237) TMEM30A (ENSOKIG00005044249) FILIP1 (ENSOKIG00005044317) SENP6 (ENSOKIG00005044928) myo6a (ENSOKIG00005044362) ENSOKIG00005044947 HTR1B (ENSOKIG00005044972) mei4 (ENSOKIG00005044984) nt5e (ENSOKIG00005045013) snx14 (ENSOKIG00005045297) SYNCRIP (ENSOKIG00005045826) ENSOKIG00005046159 Chinook salmon MODERN SPECIES 9 ENSOTSG00005016480 CLDN20 (ENSOTSG00005016482) ENSOTSG00005016486 cnksr3 (ENSOTSG00005016520) PRKD3 (ENSOTSG00005016531) ndufaf7 (ENSOTSG00005016902) cebpz (ENSOTSG00005016904) FOXA2 (ENSOTSG00005016930) #12 PAX1 (ENSOTSG00005016931) #13 nkx2.2b (ENSOTSG00005016932) #14 nkx2.4b (ENSOTSG00005016933) #15 xrn2 (ENSOTSG00005016934) #16 ENSOTSG00005020267 insm1a (ENSOTSG00005020268) #20 CFAP61 (ENSOTSG00005020273) #21 crnkl1 (ENSOTSG00005020282) #22 naa20 (ENSOTSG00005020290) #23 COL12A1 (ENSOTSG00005020304) COX7A2 (ENSOTSG00005020377) tmem30ab (ENSOTSG00005020382) FILIP1 (ENSOTSG00005020383) SENP6 (ENSOTSG00005020386) myo6a (ENSOTSG00005020408) ENSOTSG00005021736 HTR1B (ENSOTSG00005021737) mei4 (ENSOTSG00005021738) nt5e (ENSOTSG00005021739) snx14 (ENSOTSG00005021762) syncrip (ENSOTSG00005021976) ENSOTSG00005021987 HTR1E (ENSOTSG00005021988) Huchen MODERN SPECIES 50 arid1b (ENSHHUG00000024315) CLDN20 (ENSHHUG00000024324) TIAM2 (ENSHHUG00000024329) cnksr3 (ENSHHUG00000024360) PRKD3 (ENSHHUG00000024371) ndufaf7 (ENSHHUG00000024766) CEBPZ (ENSHHUG00000024789) FOXA2 (ENSHHUG00000024806) #12 PAX1 (ENSHHUG00000024814) #13 nkx2.2b (ENSHHUG00000024821) #14 nkx2.4b (ENSHHUG00000024823) #15 xrn2 (ENSHHUG00000024838) #16 ENSHHUG00000024877 insm1a (ENSHHUG00000024879) #20 CFAP61 (ENSHHUG00000024881) #21 crnkl1 (ENSHHUG00000024888) #22 naa20 (ENSHHUG00000024897) #23 ENSHHUG00000024901 CD109 (ENSHHUG00000024911) ENSHHUG00000024935 ENSHHUG00000025342 ENSHHUG00000025349 ENSHHUG00000025355 COX7A2 (ENSHHUG00000025358) TMEM30A (ENSHHUG00000025361) FILIP1 (ENSHHUG00000025437) SENP6 (ENSHHUG00000025453) myo6a (ENSHHUG00000025503) ENSHHUG00000025696 HTR1B (ENSHHUG00000025729) mei4 (ENSHHUG00000025736) Salmoninae ANCESTRAL SPECIES 402 ENSGT00940000163429.B ENSGT00940000163429.A ENSGT00940000163429.C.a.b ENSGT00800000125320 ENSGT00950000183024.a.a.b.r.a ENSGT00390000001588.o ENSGT00390000006395.j.a ENSGT00500000045333 ENSGT00940000155999.e.b.a #12 ENSGT00940000159137.b.b.d #13 ENSGT00940000159727.k.b #14 ENSGT00940000162247.f.e #15 ENSGT00670000098098.h #16 ENSGT00940000162552.a.b.d #20 ENSGT00390000004987.jb #21 ENSGT00550000074931.f #22 ENSGT00550000075046.g #23 Salmoninae_a ANCESTRAL SPECIES 42 ENSGT00940000157012.l.d ENSGT00940000163429.A ENSGT00940000163429.C.a.b ENSGT00800000125320 ENSGT00950000183024.a.a.b.r.a ENSGT00390000001588.o ENSGT00390000006395.j.a ENSGT00500000045333 ENSGT00940000155999.e.b.a #12 ENSGT00940000159137.b.b.d #13 ENSGT00940000159727.k.b #14 ENSGT00940000162247.f.e #15 ENSGT00670000098098.h #16 ENSGT00940000162552.a.b.d #20 ENSGT00390000004987.jb #21 ENSGT00550000074931.f #22 ENSGT00550000075046.g #23 ENSGT00940000154923.C.w.b.d ENSGT01000000217321 ENSGT00390000004660.C.a.a.d.a ENSGT00950000182852.A.a.a.a.f ENSGT00940000155724.r.j ENSGT00940000156078.d.d ENSGT00530000063503.a.b.g.a.d ENSGT01010000222287.B.b.a.b.b.a.c ENSGT00530000063775.a.a.b.b ENSGT00950000182856.a.b.b.b ENSGT00940000153511.b.r.g ENSGT00940000177253 ENSGT00940000157865.l ENSGT01010000222287.B.b.a.a.b.a.a Salmo ANCESTRAL SPECIES 26 ENSGT00940000157012.l.d ENSGT00940000163429.A ENSGT00940000163429.C.a.b ENSGT00800000125320 ENSGT00950000183024.a.a.b.r.a ENSGT00390000001588.o ENSGT00390000006395.j.a ENSGT00940000177839 ENSGT00940000155999.e.b.a #12 ENSGT00940000159137.b.b.d #13 ENSGT00940000159727.k.b #14 ENSGT00940000162247.f.e #15 ENSGT00670000098098.h #16 ENSGT00940000162552.a.b.d #20 ENSGT00390000004987.jb #21 ENSGT00550000074931.f #22 ENSGT00550000075046.g #23 ENSGT00940000154923.C.w.b.d ENSGT01000000217321 ENSGT00390000004660.C.a.a.d.a ENSGT00950000182852.A.a.a.a.f ENSGT00940000155724.r.j ENSGT00940000156078.d.d ENSGT00530000063503.a.b.g.a.d ENSGT01010000222287.B.b.a.b.b.a.c ENSGT00530000063775.a.a.b.b ENSGT00950000182856.a.b.b.b ENSGT00940000153511.b.r.g ENSGT00940000177253 ENSGT00940000157865.l ENSGT01010000222287.B.b.a.a.b.a.a River trout MODERN SPECIES 28 ENSSTUG00000034457 ipcef1 (ENSSTUG00000034404) cnksr3 (ENSSTUG00000034360) ENSSTUG00000034355 PRKD3 (ENSSTUG00000034207) ENSSTUG00000034189 ndufaf7 (ENSSTUG00000034102) ENSSTUG00000034094 ENSSTUG00000034089 FOXA2 (ENSSTUG00000034068) #12 PAX1 (ENSSTUG00000034048) #13 nkx2.2b (ENSSTUG00000034037) #14 xrn2 (ENSSTUG00000033801) #16 insm1a (ENSSTUG00000033751) #20 CFAP61 (ENSSTUG00000033582) #21 crnkl1 (ENSSTUG00000033330) #22 naa20 (ENSSTUG00000033293) #23 COL12A1 (ENSSTUG00000031564) ENSSTUG00000031426 tmem30ab (ENSSTUG00000031410) FILIP1 (ENSSTUG00000031371) SENP6 (ENSSTUG00000031322) myo6a (ENSSTUG00000047396) HTR1B (ENSSTUG00000047370) ENSSTUG00000047366 nt5e (ENSSTUG00000047319) snx14 (ENSSTUG00000046427) syncrip (ENSSTUG00000046015) ENSSTUG00000045831 ENSSTUG00000045825 HTR1E (ENSSTUG00000045818) Atlantic salmon MODERN SPECIES 6 TIAM2 (ENSSSAG00000068052) ENSSSAG00000068072 ENSSSAG00000068079 ENSSSAG00000068086 PRKD3 (ENSSSAG00000068132) ENSSSAG00000070053 ENSSSAG00000070058 ENSSSAG00000070063 ENSSSAG00000120483 ENSSSAG00000070069 #12 PAX1 (ENSSSAG00000101257) #13 nkx2.2b (ENSSSAG00000089576) #14 xrn2 (ENSSSAG00000070113) #16 nkx2.4b (ENSSSAG00000070080) #15 CFAP61 (ENSSSAG00000070165) #21 crnkl1 (ENSSSAG00000076271) #22 NAA20 (ENSSSAG00000070794) #23 COL12A1 (ENSSSAG00000070858) ENSSSAG00000071564 ENSSSAG00000088113 TMEM30A (ENSSSAG00000071571) FILIP1 (ENSSSAG00000071574) SENP6 (ENSSSAG00000071578) MYO6 (ENSSSAG00000071614) ENSSSAG00000098377 ENSSSAG00000072052 ENSSSAG00000083181 HTR1B (ENSSSAG00000072056) nt5e (ENSSSAG00000072076) SNX14 (ENSSSAG00000072626) SYNCRIP (ENSSSAG00000074958) Oncorhynchus ANCESTRAL SPECIES 35 ENSGT00940000157012.l.d ENSGT00940000163429.B ENSGT00940000163429.C.a.b ENSGT00800000125320 ENSGT00950000183024.a.a.b.r.a ENSGT00390000001588.o ENSGT00390000006395.j.a ENSGT00500000045333 ENSGT00940000155999.e.b.a #12 ENSGT00940000159137.b.b.d #13 ENSGT00940000159727.k.b #14 ENSGT00940000162247.f.e #15 ENSGT00670000098098.h #16 ENSGT00940000162552.a.b.d #20 ENSGT00390000004987.jb #21 ENSGT00550000074931.f #22 ENSGT00550000075046.g #23 ENSGT00940000154923.C.w.b.d ENSGT01000000217321 ENSGT00390000004660.C.a.a.d.a ENSGT00950000182852.A.a.a.a.f ENSGT00940000155724.r.j ENSGT00940000156078.d.d ENSGT00530000063503.a.b.g.a.d ENSGT01010000222287.B.b.a.b.b.a.c ENSGT00530000063775.a.a.b.b ENSGT00950000182856.a.b.b.b ENSGT00940000153511.b.r.g ENSGT00940000157865.l ENSGT01010000222287.B.b.a.a.b.a.a ENSGT01060000252229 Oncorhynchus_a ANCESTRAL SPECIES 53 ENSGT00940000163429.B ENSGT00940000163429.C.a.b ENSGT00800000125320 ENSGT00950000183024.a.a.b.r.a ENSGT00390000001588.o ENSGT00390000006395.j.a ENSGT00500000045333 ENSGT00940000155999.e.b.a #12 ENSGT00940000159137.b.b.d #13 ENSGT00940000159727.k.b #14 ENSGT00940000162247.f.e #15 ENSGT00670000098098.h #16 ENSGT01010000229567 ENSGT00940000162552.a.b.d #20 ENSGT00390000004987.jb #21 ENSGT00550000074931.f #22 ENSGT00550000075046.g #23 ENSGT00940000154923.C.w.b.d ENSGT01000000217321 ENSGT00390000004660.C.a.a.d.a ENSGT00950000182852.A.a.a.a.f ENSGT00940000155724.r.j ENSGT00940000156078.d.d ENSGT00530000063503.a.b.g.a.d ENSGT01010000222287.B.b.a.b.b.a.c ENSGT00530000063775.a.a.b.b ENSGT00950000182856.a.b.b.b ENSGT00940000153511.b.r.g ENSGT00940000157865.l ENSGT01010000222287.B.b.a.a.b.a.a ENSGT00950000183034.C.a.a.n Chinook salmon MODERN SPECIES 29 CLDN20 (ENSOTSG00005039956) ENSOTSG00005039958 cnksr3 (ENSOTSG00005039971) ENSOTSG00005040269 PRKD3 (ENSOTSG00005040270) ndufaf7 (ENSOTSG00005040302) CEBPZOS (ENSOTSG00005040304) FOXA2 (ENSOTSG00005040307) #12 PAX1 (ENSOTSG00005040309) #13 nkx2.2b (ENSOTSG00005040312) #14 nkx2.4b (ENSOTSG00005040313) #15 xrn2 (ENSOTSG00005040315) #16 ENSOTSG00005040427 insm1a (ENSOTSG00005040428) #20 CFAP61 (ENSOTSG00005040429) #21 crnkl1 (ENSOTSG00005040432) #22 naa20 (ENSOTSG00005040544) #23 COL12A1 (ENSOTSG00005040589) ENSOTSG00005040710 tmem30ab (ENSOTSG00005040712) FILIP1 (ENSOTSG00005040713) SENP6 (ENSOTSG00005040715) myo6a (ENSOTSG00005040720) ENSOTSG00005041263 ENSOTSG00005041266 HTR1B (ENSOTSG00005041271) ENSOTSG00005041272 nt5e (ENSOTSG00005041274) snx14 (ENSOTSG00005000459) syncrip (ENSOTSG00005009733) ENSOTSG00005009759 Coho salmon MODERN SPECIES 3 ENSOKIG00005002996 ENSOKIG00005003030 PRKD3 (ENSOKIG00005003135) NDUFAF7 (ENSOKIG00005003407) ENSOKIG00005003425 ENSOKIG00005003432 CEBPZOS (ENSOKIG00005003436) FOXA2 (ENSOKIG00005003446) #12 PAX1 (ENSOKIG00005003462) #13 nkx2.2b (ENSOKIG00005003473) #14 nkx2.4b (ENSOKIG00005003479) #15 xrn2 (ENSOKIG00005003563) #16 ENSOKIG00005003675 insm1a (ENSOKIG00005003682) #20 CFAP61 (ENSOKIG00005003690) #21 crnkl1 (ENSOKIG00005003763) #22 naa20 (ENSOKIG00005004022) #23 COL12A1 (ENSOKIG00005004623) ENSOKIG00005006597 tmem30ab (ENSOKIG00005006608) FILIP1 (ENSOKIG00005006624) SENP6 (ENSOKIG00005006642) myo6a (ENSOKIG00005006753) ENSOKIG00005007188 HTR1B (ENSOKIG00005007222) nt5e (ENSOKIG00005007263) snx14 (ENSOKIG00005007437) syncrip (ENSOKIG00005007769) ENSOKIG00005002111 HTR1E (ENSOKIG00005002158) znf292b (ENSOKIG00005002168) Rainbow trout MODERN SPECIES 29 ENSOMYG00000043367 ENSOMYG00000043390 ENSOMYG00000043395 PRKD3 (ENSOMYG00000043521) ENSOMYG00000053641 ENSOMYG00000064703 NDUFAF7 (ENSOMYG00000043817) CEBPZOS (ENSOMYG00000077371) FOXA2 (ENSOMYG00000043829) #12 PAX1 (ENSOMYG00000043833) #13 nkx2.2b (ENSOMYG00000043836) #14 nkx2.1b (ENSOMYG00000043840) #15 xrn2 (ENSOMYG00000044000) #16 INSM1 (ENSOMYG00000044800) #20 CFAP61 (ENSOMYG00000044804) #21 crnkl1 (ENSOMYG00000044816) #22 NAA20 (ENSOMYG00000044832) #23 COL12A1 (ENSOMYG00000044935) ENSOMYG00000054017 ENSOMYG00000045200 TMEM30A (ENSOMYG00000045203) ENSOMYG00000045207 FILIP1 (ENSOMYG00000045212) SENP6 (ENSOMYG00000045216) myo6a (ENSOMYG00000045257) ENSOMYG00000045318 HTR1B (ENSOMYG00000030129) nt5e (ENSOMYG00000030334) snx14 (ENSOMYG00000031225) ENSOMYG00000068088 SYNCRIP (ENSOMYG00000033166) Huchen MODERN SPECIES 5336 CFAP61 (ENSHHUG00000030046) #21 crnkl1 (ENSHHUG00000030064) #22 naa20 (ENSHHUG00000030270) #23 Northern pike MODERN SPECIES 17 TIAM2 (ENSELUG00000014740) ENSELUG00000014809 cnksr3 (ENSELUG00000014923) ENSELUG00000014946 PRKD3 (ENSELUG00000014993) ndufaf7 (ENSELUG00000015064) cebpz (ENSELUG00000015123) FOXA2 (ENSELUG00000015136) #12 PAX1 (ENSELUG00000000549) #13 nkx2.2b (ENSELUG00000015194) #14 nkx2.4b (ENSELUG00000015208) #15 xrn2 (ENSELUG00000000552) #16 ENSELUG00000015309 insm1a (ENSELUG00000001086) #20 CFAP61 (ENSELUG00000015346) #21 crnkl1 (ENSELUG00000015424) #22 naa20 (ENSELUG00000015394) #23 COL12A1 (ENSELUG00000015523) COX7A2 (ENSELUG00000015788) tmem30ab (ENSELUG00000015863) FILIP1 (ENSELUG00000015895) SENP6 (ENSELUG00000015978) ENSELUG00000016055 ENSELUG00000016146 HTR1B (ENSELUG00000016168) nt5e (ENSELUG00000001105) snx14 (ENSELUG00000016432) syncrip (ENSELUG00000016493) ENSELUG00000016600 HTR1E (ENSELUG00000016618) znf292b (ENSELUG00000016721) Spotted gar MODERN SPECIES 647 mocs3 (ENSLOCG00000016860) ENSLOCG00000016863 PRKD3 (ENSLOCG00000016864) ndufaf7 (ENSLOCG00000016865) cebpz (ENSLOCG00000016867) foxa2 (ENSLOCG00000016870) #12 pax1a (ENSLOCG00000016871) #13 nkx2.2a (ENSLOCG00000016872) #14 nkx2.4a (ENSLOCG00000016873) #15 xrn2 (ENSLOCG00000016874) #16 kiz (ENSLOCG00000016881) #18 ENSLOCG00000016882 RALGAPA2 (ENSLOCG00000016884) #19 insm1b (ENSLOCG00000018009) #20 CFAP61 (ENSLOCG00000016887) #21 crnkl1 (ENSLOCG00000016889) #22 naa20 (ENSLOCG00000016890) #23 CD109 (ENSLOCG00000016893) COL12A1 (ENSLOCG00000016895) cox7a2a (ENSLOCG00000016899) tmem30ab (ENSLOCG00000016901) FILIP1 (ENSLOCG00000016903) SENP6 (ENSLOCG00000016904) myo6a (ENSLOCG00000016906) ENSLOCG00000016912 ENSLOCG00000016913 HTR1B (ENSLOCG00000018010) mei4 (ENSLOCG00000016914) nt5e (ENSLOCG00000016916) snx14 (ENSLOCG00000016917) syncripl (ENSLOCG00000016919) Reedfish MODERN SPECIES 11 slc35a1 (ENSECRG00000003460) cfap206 (ENSECRG00000003415) pax1a (ENSECRG00000003390) #13 nkx2.2a (ENSECRG00000003378) #14 nkx2.4a (ENSECRG00000003374) #15 xrn2 (ENSECRG00000003348) #16 ENSECRG00000003335 #18 ENSECRG00000003325 ENSECRG00000003318 ENSECRG00000003311 ENSECRG00000003297 #19 insm1b (ENSECRG00000003285) #20 ENSECRG00000003281 CFAP61 (ENSECRG00000003266) #21 ENSECRG00000003253 #21 crnkl1 (ENSECRG00000003231) #22 naa20 (ENSECRG00000003211) #23 CD109 (ENSECRG00000002215) ENSECRG00000001944 ENSECRG00000001892 ENSECRG00000001815 cox7a2a (ENSECRG00000001678) tmem30ab (ENSECRG00000001665) FILIP1 (ENSECRG00000001630) SENP6 (ENSECRG00000001526) ENSECRG00000001481 ENSECRG00000001274 IMPG1 (ENSECRG00000000991) HTR1B (ENSECRG00000000865) ENSECRG00000000853 nt5e (ENSECRG00000000817) Elephant shark MODERN SPECIES 1546 sft2d1 (ENSCMIG00000018744) foxa2 (ENSCMIG00000018738) #12 pax1a (ENSCMIG00000018735) #13 nkx2.2a (ENSCMIG00000018730) #14 nkx2.4a (ENSCMIG00000018729) #15 xrn2 (ENSCMIG00000018711) #16 ENSCMIG00000018703 #18 ENSCMIG00000018699 #18 ENSCMIG00000018696 RALGAPA2 (ENSCMIG00000018616) #19 ENSCMIG00000018538 insm1b (ENSCMIG00000018535) #20 ENSCMIG00000018531 ENSCMIG00000018529 #21 ENSCMIG00000018525 #21 crnkl1 (ENSCMIG00000018506) #22 naa20 (ENSCMIG00000018498) #23 RIN2 (ENSCMIG00000018491) #24 ENSCMIG00000018487 #25 dtd1 (ENSCMIG00000018486) #26 sec23b (ENSCMIG00000018466) #28 rbbp9 (ENSCMIG00000018452) #29 mpc1 (ENSCMIG00000018445) SYNDIG1 (ENSCMIG00000018443) ENSCMIG00000018440 slc22a3 (ENSCMIG00000018436) ENSCMIG00000018433 sertad2b (ENSCMIG00000018432) actr2a (ENSCMIG00000018398) ENSCMIG00000018378 ypel5 (ENSCMIG00000018374) Cyclostomata ANCESTRAL SPECIES 45 ENSGT00550000074931 #22 ENSGT00940000154866.A.b ##24 ENSGT01050000244840.B.b ENSGT00870000136554 #7 ENSGT00390000005826.a.c Lamprey MODERN SPECIES 85 ENSPMAG00000002271 ENSPMAG00000002270 flrt3 (ENSPMAG00000002268) crnkl1 (ENSPMAG00000002250) #22 ENSPMAG00000002247 ##24 ENSPMAG00000009988 ENSPMAG00000002243 ENSPMAG00000002228 #7 ENSPMAG00000002200 sars2 (ENSPMAG00000002160) ENSPMAG00000002158 mcm5 (ENSPMAG00000002132) ENSPMAG00000002121 Hagfish MODERN SPECIES 364 ENSEBUG00000011923 ENSEBUG00000002899 ENSEBUG00000009028 gpd2 (ENSEBUG00000010512) ENSEBUG00000002387 ENSEBUG00000006084 ENSEBUG00000005039 ENSEBUG00000014517 ENSEBUG00000013890 ENSEBUG00000008368 ENSEBUG00000010552 ENSEBUG00000014662 crnkl1 (ENSEBUG00000013461) #22 ENSEBUG00000001118 ##24 ENSEBUG00000014292 ENSEBUG00000004858 #7 napab (ENSEBUG00000014426) ENSEBUG00000009813 ENSEBUG00000007431 ENSEBUG00000014459 ENSEBUG00000014923 ENSEBUG00000005047 ENSEBUG00000012755 rpl27 (ENSEBUG00000001489) ENSEBUG00000003276 ENSEBUG00000001352 ENSEBUG00000005927 ENSEBUG00000013209 Ciona ANCESTRAL SPECIES ENSGT00550000074931 #22 Ciona intestinalis MODERN SPECIES 94 ENSCING00000018539 ENSCING00000021946 ENSCING00000002681 ENSCING00000002683 ENSCING00000024969 ENSCING00000016042 ENSCING00000016044 ENSCING00000002686 ENSCING00000016059 ENSCING00000002689 mapkk3/6 (ENSCING00000002692) ENSCING00000022242 ENSCING00000002703 ENSCING00000020213 ENSCING00000002708 ENSCING00000002709 #22 ENSCING00000002711 ENSCING00000002713 ENSCING00000020408 ENSCING00000002715 ENSCING00000024728 ci-zf(c2h2)-42 (ENSCING00000022137)