Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00940000154740 #22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000154740 #22
Amniota	DUPLICATION
Amniota	DUPLICATION
Amniota	ANCESTRAL SPECIES	396															ENSGT01100000263521.a.a.b.b	ENSGT00940000154740.a.b #22
Mammalia	DUPLICATION
Mammalia	ANCESTRAL SPECIES	206															ENSGT01100000263521.a.a.b.b	ENSGT00940000154740.a.b.b #22	ENSGT01100000263491.a.b.a.a.a.a.a.b.d
Theria	ANCESTRAL SPECIES	10	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00940000180007	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Eutheria	ANCESTRAL SPECIES	23	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00940000180007	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00940000180007	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Laurasiatheria_b	DUPLICATION
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Carnivora	ANCESTRAL SPECIES	12	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Felidae	ANCESTRAL SPECIES	25	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647.d #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Panthera	ANCESTRAL SPECIES	29	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647.d #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37
Panthera_a	ANCESTRAL SPECIES	31	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647.d #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37
lion	MODERN SPECIES	16	TMEM114 (ENSPLOG00000011568) #7	ENSPLOG00000011530 #8	RBFOX1 (ENSPLOG00000010266) #9	ENSPLOG00000009927 #10	ENSPLOG00000009466 #11	ENSPLOG00000009221 #12	C16orf89 (ENSPLOG00000009152) #13	NAGPA (ENSPLOG00000009095) #14	SEC14L5 (ENSPLOG00000009039) #15	PPL (ENSPLOG00000008809) #16	UBN1 (ENSPLOG00000008593) #17	GLYR1 (ENSPLOG00000008301) #18	ROGDI (ENSPLOG00000008136) #19	SMIM22 (ENSPLOG00000008082) #20	SEPTIN12 (ENSPLOG00000007919) #21	ZNF500 (ENSPLOG00000007880) #22	DNAAF8 (ENSPLOG00000007804) #23	ANKS3 (ENSPLOG00000007661) #24	NUDT16L1 (ENSPLOG00000007538) #25	MGRN1 (ENSPLOG00000007356) #26	UBALD1 (ENSPLOG00000007279) #27	CDIP1 (ENSPLOG00000007175) #28	HMOX2 (ENSPLOG00000007142) #29	NMRAL1 (ENSPLOG00000007113) #30	DNAJA3 (ENSPLOG00000007049) #31	VASN (ENSPLOG00000007015) #32	CORO7 (ENSPLOG00000006733) #33	PAM16 (ENSPLOG00000006652) #34	GLIS2 (ENSPLOG00000006622) #35	TFAP4 (ENSPLOG00000006607) #36	SRL (ENSPLOG00000006562) #37
leopard	MODERN SPECIES	53	METTL22 (ENSPPRG00000014045)	TMEM114 (ENSPPRG00000016060) #7	RBFOX1 (ENSPPRG00000006546) #9	ENSPPRG00000007776 #10	ENSPPRG00000012109 #11	ENSPPRG00000013176 #12	C16orf89 (ENSPPRG00000013372) #13	NAGPA (ENSPPRG00000016551) #14	SEC14L5 (ENSPPRG00000019586) #15	PPL (ENSPPRG00000000241) #16	UBN1 (ENSPPRG00000002046) #17	GLYR1 (ENSPPRG00000004229) #18	ROGDI (ENSPPRG00000004563) #19	SMIM22 (ENSPPRG00000005235) #20	SEPTIN12 (ENSPPRG00000006622) #21	ZNF500 (ENSPPRG00000008031) #22	DNAAF8 (ENSPPRG00000009405) #23	ANKS3 (ENSPPRG00000011928) #24	NUDT16L1 (ENSPPRG00000012667) #25	MGRN1 (ENSPPRG00000017543) #26	UBALD1 (ENSPPRG00000022000) #27	CDIP1 (ENSPPRG00000000434) #28	HMOX2 (ENSPPRG00000001476) #29	NMRAL1 (ENSPPRG00000002098) #30	DNAJA3 (ENSPPRG00000003384) #31	VASN (ENSPPRG00000018301) #32	CORO7 (ENSPPRG00000008798) #33	ENSPPRG00000009459 #34	GLIS2 (ENSPPRG00000009601) #35	TFAP4 (ENSPPRG00000009735) #36	SRL (ENSPPRG00000010274) #37
Tiger	MODERN SPECIES	18								ENSPTIG00000015784 ##12	C16orf89 (ENSPTIG00000015770) #13	NAGPA (ENSPTIG00000015736) #14	SEC14L5 (ENSPTIG00000015714) #15	UBN1 (ENSPTIG00000015601) #17	GLYR1 (ENSPTIG00000015560) #18	ROGDI (ENSPTIG00000015542) #19	SEPTIN12 (ENSPTIG00000015526) #21	ZNF500 (ENSPTIG00000015507) #22	DNAAF8 (ENSPTIG00000015496) #23	ANKS3 (ENSPTIG00000015476) #24	MGRN1 (ENSPTIG00000015435) #26	CDIP1 (ENSPTIG00000015399) #28	HMOX2 (ENSPTIG00000015380) #29	NMRAL1 (ENSPTIG00000015364) #30	DNAJA3 (ENSPTIG00000015328) #31	CORO7 (ENSPTIG00000015230) #33	PAM16 (ENSPTIG00000015200) #34	GLIS2 (ENSPTIG00000015188) #35	TFAP4 (ENSPTIG00000015175) #36	SRL (ENSPTIG00000015162) #37	ADCY9 (ENSPTIG00000015141)	CREBBP (ENSPTIG00000015039)	TRAP1 (ENSPTIG00000015003)
Cat	MODERN SPECIES	247	METTL22 (ENSFCAG00000001434)	TMEM114 (ENSFCAG00000042899) #7	RBFOX1 (ENSFCAG00000025322) #9	ENSFCAG00000024232 #10	ENSFCAG00000024781 #11	ENSFCAG00000004574 #12	CE3H16orf89 (ENSFCAG00000022864) #13	NAGPA (ENSFCAG00000004573) #14	SEC14L5 (ENSFCAG00000004572) #15	PPL (ENSFCAG00000004571) #16	UBN1 (ENSFCAG00000004570) #17	GLYR1 (ENSFCAG00000028872) #18	ROGDI (ENSFCAG00000004568) #19	SMIM22 (ENSFCAG00000043505) #20	SEPTIN12 (ENSFCAG00000029843) #21	ZNF500 (ENSFCAG00000037801) #22	CE3H16orf71 (ENSFCAG00000004566) #23	ANKS3 (ENSFCAG00000004565) #24	MGRN1 (ENSFCAG00000004561) #26	UBALD1 (ENSFCAG00000012404) #27	CE3H16orf96 (ENSFCAG00000041527)	CDIP1 (ENSFCAG00000024464) #28	HMOX2 (ENSFCAG00000012401) #29	NMRAL1 (ENSFCAG00000012397) #30	DNAJA3 (ENSFCAG00000012390) #31	CORO7 (ENSFCAG00000011231) #33	VASN (ENSFCAG00000011235) #32	PAM16 (ENSFCAG00000027971) #34	GLIS2 (ENSFCAG00000011229) #35	TFAP4 (ENSFCAG00000042099) #36	SRL (ENSFCAG00000022075) #37
Caniformia	ANCESTRAL SPECIES	8	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Canidae	ANCESTRAL SPECIES	3	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Red fox	MODERN SPECIES	44	METTL22 (ENSVVUG00000017351)	TMEM114 (ENSVVUG00000017347) #7	RBFOX1 (ENSVVUG00000017311) #9	ENSVVUG00000017279 #10	ENSVVUG00000017274 #11	ENSVVUG00000017261 #12	CUNH16orf89 (ENSVVUG00000017248) #13	NAGPA (ENSVVUG00000017239) #14	SEC14L5 (ENSVVUG00000016681) #15	PPL (ENSVVUG00000016634) #16	UBN1 (ENSVVUG00000016596) #17	GLYR1 (ENSVVUG00000016582) #18	ROGDI (ENSVVUG00000016574) #19	ENSVVUG00000016570	SEPT12 (ENSVVUG00000016536) #21	ZNF500 (ENSVVUG00000016529) #22	CUNH16orf71 (ENSVVUG00000016518) #23	ANKS3 (ENSVVUG00000016500) #24	NUDT16L1 (ENSVVUG00000016495) #25	MGRN1 (ENSVVUG00000016476) #26	UBALD1 (ENSVVUG00000016459) #27	C16orf96 (ENSVVUG00000016449)	CDIP1 (ENSVVUG00000016443) #28	HMOX2 (ENSVVUG00000016435) #29	NMRAL1 (ENSVVUG00000016433) #30	DNAJA3 (ENSVVUG00000016425) #31	VASN (ENSVVUG00000016422) #32	CORO7 (ENSVVUG00000016385) #33	ENSVVUG00000016369 #34	GLIS2 (ENSVVUG00000016356) #35	TFAP4 (ENSVVUG00000016336) #36
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Dog	MODERN SPECIES	34	METTL22 (ENSCAFG00845014096)	TMEM114 (ENSCAFG00845014153) #7	RBFOX1 (ENSCAFG00845014550) #9	ENSCAFG00845015970 #10	ENSCAFG00845016088 #11	ENSCAFG00845016350 #12	C16orf89 (ENSCAFG00845016484) #13	NAGPA (ENSCAFG00845016574) #14	SEC14L5 (ENSCAFG00845016722) #15	PPL (ENSCAFG00845017042) #16	UBN1 (ENSCAFG00845017631) #17	GLYR1 (ENSCAFG00845018008) #18	ROGDI (ENSCAFG00845018356) #19	SMIM22 (ENSCAFG00845018517) #20	SEPTIN12 (ENSCAFG00845018571) #21	ZNF500 (ENSCAFG00845018727) #22	DNAAF8 (ENSCAFG00845018848) #23	ANKS3 (ENSCAFG00845018986) #24	NUDT16L1 (ENSCAFG00845019415) #25	MGRN1 (ENSCAFG00845019549) #26	UBALD1 (ENSCAFG00845020280) #27	C16orf96 (ENSCAFG00845000705)	ENSCAFG00845000737	CDIP1 (ENSCAFG00845000765) #28	HMOX2 (ENSCAFG00845000786) #29	NMRAL1 (ENSCAFG00845000808) #30	DNAJA3 (ENSCAFG00845000869) #31	CORO7 (ENSCAFG00845001104) #33	VASN (ENSCAFG00845001337) #32	GLIS2 (ENSCAFG00845001353) #35	TFAP4 (ENSCAFG00845001381) #36
Dingo	MODERN SPECIES	172	TMEM114 (ENSCAFG00020024876) #7	RBFOX1 (ENSCAFG00020024881) #9	ENSCAFG00020024887 #10	ENSCAFG00020024888	ENSCAFG00020024890 #11	ENSCAFG00020024891 #12	C16orf89 (ENSCAFG00020024892) #13	NAGPA (ENSCAFG00020024893) #14	SEC14L5 (ENSCAFG00020024898) #15	PPL (ENSCAFG00020024906) #16	UBN1 (ENSCAFG00020024913) #17	GLYR1 (ENSCAFG00020024930) #18	ROGDI (ENSCAFG00020024933) #19	ENSCAFG00020024934 #20	SEPTIN12 (ENSCAFG00020024938) #21	ENSCAFG00020024945 #22	DNAAF8 (ENSCAFG00020024946) #23	ANKS3 (ENSCAFG00020024950) #24	NUDT16L1 (ENSCAFG00020024952) #25	MGRN1 (ENSCAFG00020024956) #26	UBALD1 (ENSCAFG00020024969) #27	CDIP1 (ENSCAFG00020024973) #28	HMOX2 (ENSCAFG00020024976) #29	NMRAL1 (ENSCAFG00020024981) #30	DNAJA3 (ENSCAFG00020024983) #31	CORO7 (ENSCAFG00020024990) #33	VASN (ENSCAFG00020025011) #32	PAM16 (ENSCAFG00020025013) #34	GLIS2 (ENSCAFG00020025014) #35	TFAP4 (ENSCAFG00020025017) #36	SRL (ENSCAFG00020025024) #37
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Mustelinae	ANCESTRAL SPECIES	15	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872.a #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Ferret	MODERN SPECIES	189	ENSMPUG00000014811	TMEM114 (ENSMPUG00000014813) #7	ENSMPUG00000014819	RBFOX1 (ENSMPUG00000014822) #9	ENSMPUG00000014827 #10	ENSMPUG00000014839 #11	ENSMPUG00000014862 #12	C16orf89 (ENSMPUG00000014864) #13	NAGPA (ENSMPUG00000014868) #14	SEC14L5 (ENSMPUG00000014870) #15	PPL (ENSMPUG00000014875) #16	UBN1 (ENSMPUG00000014879) #17	GLYR1 (ENSMPUG00000014885) #18	ROGDI (ENSMPUG00000014892) #19	SEPTIN12 (ENSMPUG00000014915) #21	ZNF500 (ENSMPUG00000014955) #22	DNAAF8 (ENSMPUG00000014963) #23	ANKS3 (ENSMPUG00000014971) #24	MGRN1 (ENSMPUG00000014976) #26	UBALD1 (ENSMPUG00000014980) #27	C16orf96 (ENSMPUG00000014995)	CDIP1 (ENSMPUG00000014999) #28	HMOX2 (ENSMPUG00000015002) #29	ENSMPUG00000015003 #30	DNAJA3 (ENSMPUG00000015010) #31	CORO7 (ENSMPUG00000015012) #33	VASN (ENSMPUG00000020051) #32	PAM16 (ENSMPUG00000015016) #34	GLIS2 (ENSMPUG00000015020) #35	TFAP4 (ENSMPUG00000015023) #36	SRL (ENSMPUG00000015025) #37
American mink	MODERN SPECIES	91	TMEM114 (ENSNVIG00000000165) #7	RBFOX1 (ENSNVIG00000000196) #9	ENSNVIG00000000820	ENSNVIG00000000826 #10	ENSNVIG00000000874 #11	ENSNVIG00000000963 #12	C16orf89 (ENSNVIG00000000990) #13	NAGPA (ENSNVIG00000001030) #14	SEC14L5 (ENSNVIG00000001051) #15	PPL (ENSNVIG00000001102) #16	UBN1 (ENSNVIG00000001173) #17	GLYR1 (ENSNVIG00000001276) #18	ROGDI (ENSNVIG00000001376) #19	SMIM22 (ENSNVIG00000001390) #20	SEPTIN12 (ENSNVIG00000001425) #21	ZNF500 (ENSNVIG00000001474) #22	DNAAF8 (ENSNVIG00000001493) #23	ENSNVIG00000001522 #24
Ursidae	ANCESTRAL SPECIES	3	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Ursus	ANCESTRAL SPECIES	9	ENSGT00910000147924	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310.r #21	ENSGT00950000185912	ENSGT00940000158310.q #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Polar bear	MODERN SPECIES	200	METTL22 (ENSUMAG00000003613)	RBFOX1 (ENSUMAG00000003579) #9	ENSUMAG00000003553	ENSUMAG00000003539 #10	ENSUMAG00000003536 #11	ENSUMAG00000003525 #12	C16orf89 (ENSUMAG00000003504) #13	NAGPA (ENSUMAG00000003486) #14	SEC14L5 (ENSUMAG00000003238) #15	PPL (ENSUMAG00000003113) #16	UBN1 (ENSUMAG00000003045) #17	GLYR1 (ENSUMAG00000003035) #18	ROGDI (ENSUMAG00000003026) #19	ENSUMAG00000003021	SEPTIN12 (ENSUMAG00000002994) #21	ZNF500 (ENSUMAG00000002985) #22	ENSUMAG00000002979	ENSUMAG00000002972 #23	ANKS3 (ENSUMAG00000002958) #24	MGRN1 (ENSUMAG00000002937) #26	ENSUMAG00000002926	CDIP1 (ENSUMAG00000002920) #28	HMOX2 (ENSUMAG00000002917) #29	ENSUMAG00000002906 #30	DNAJA3 (ENSUMAG00000002857) #31	VASN (ENSUMAG00000002849) #32	CORO7 (ENSUMAG00000002675) #33	PAM16 (ENSUMAG00000002639) #34	TFAP4 (ENSUMAG00000002603) #36	SRL (ENSUMAG00000002574) #37	ADCY9 (ENSUMAG00000002524)
American black bear	MODERN SPECIES	1164				ENSUAMG00000017303 #10	ENSUAMG00000017302 #11	ENSUAMG00000017300 #12	C16orf89 (ENSUAMG00000017299) #13	NAGPA (ENSUAMG00000017298) #14	SEC14L5 (ENSUAMG00000016554) #15	PPL (ENSUAMG00000016486) #16	UBN1 (ENSUAMG00000016456) #17	GLYR1 (ENSUAMG00000016443) #18	ROGDI (ENSUAMG00000016436) #19	ENSUAMG00000016433 #20	ENSUAMG00000016430 #21	ENSUAMG00000016427 #22	DNAAF8 (ENSUAMG00000016417) #23	ENSUAMG00000016411 #24	ENSUAMG00000016408 #24	NUDT16L1 (ENSUAMG00000016407) #25	MGRN1 (ENSUAMG00000016395) #26
Giant Panda	MODERN SPECIES	1	METTL22 (ENSAMEG00000010860)	TMEM114 (ENSAMEG00000010865) #7	RBFOX1 (ENSAMEG00000008605) #9	ENSAMEG00000001456 #10	ENSAMEG00000001464 #11	ENSAMEG00000001489 #12	C16orf89 (ENSAMEG00000001510) #13	NAGPA (ENSAMEG00000001514) #14	SEC14L5 (ENSAMEG00000001536) #15	PPL (ENSAMEG00000001594) #16	UBN1 (ENSAMEG00000001673) #17	GLYR1 (ENSAMEG00000001685) #18	ROGDI (ENSAMEG00000001711) #19	ENSAMEG00000023925	SEPTIN12 (ENSAMEG00000001746) #21	ZNF500 (ENSAMEG00000027669) #22	DNAAF8 (ENSAMEG00000001667) #23	ANKS3 (ENSAMEG00000001777) #24	MGRN1 (ENSAMEG00000001816) #26	UBALD1 (ENSAMEG00000025700) #27	C16orf96 (ENSAMEG00000023502)	CDIP1 (ENSAMEG00000001847) #28	HMOX2 (ENSAMEG00000001859) #29	NMRAL1 (ENSAMEG00000001876) #30	DNAJA3 (ENSAMEG00000001884) #31	CORO7 (ENSAMEG00000001920) #33	VASN (ENSAMEG00000024476) #32	PAM16 (ENSAMEG00000030188) #34	GLIS2 (ENSAMEG00000002010) #35	TFAP4 (ENSAMEG00000002016) #36	SRL (ENSAMEG00000025837) #37
Laurasiatheria_c	ANCESTRAL SPECIES	12	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Chiroptera	ANCESTRAL SPECIES	12	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Megabat	MODERN SPECIES	5437																ZNF500 (ENSPVAG00000007576) #22
Microchiroptera	ANCESTRAL SPECIES	17	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.h #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Microbat	MODERN SPECIES	1009	TMEM114 (ENSMLUG00000028029) #7	ENSMLUG00000006429	RBFOX1 (ENSMLUG00000015896) #9	ENSMLUG00000009271	ENSMLUG00000027070 #10	ENSMLUG00000013087 #11	ENSMLUG00000013078 #12	C16orf89 (ENSMLUG00000013067) #13	NAGPA (ENSMLUG00000023610) #14	SEC14L5 (ENSMLUG00000013056) #15	PPL (ENSMLUG00000013038) #16	UBN1 (ENSMLUG00000013025) #17	GLYR1 (ENSMLUG00000013016) #18	ROGDI (ENSMLUG00000014706) #19	SEPTIN12 (ENSMLUG00000003525) #21	ENSMLUG00000014702 #22	DNAAF8 (ENSMLUG00000014696) #23	ANKS3 (ENSMLUG00000014687) #24	NUDT16L1 (ENSMLUG00000014680) #25	MGRN1 (ENSMLUG00000014670) #26	UBALD1 (ENSMLUG00000004250) #27	ENSMLUG00000024723	CDIP1 (ENSMLUG00000004246) #28	HMOX2 (ENSMLUG00000004242) #29	NMRAL1 (ENSMLUG00000017703) #30	DNAJA3 (ENSMLUG00000004228) #31	CORO7 (ENSMLUG00000028397) #33	VASN (ENSMLUG00000008909) #32	PAM16 (ENSMLUG00000008921) #34	GLIS2 (ENSMLUG00000008930) #35	TFAP4 (ENSMLUG00000005725) #36
Greater horseshoe bat	MODERN SPECIES	47	ENSRFEG00010020797	RBFOX1 (ENSRFEG00010020257) #9	ENSRFEG00010020155 #10	ENSRFEG00010020090 #11	ENSRFEG00010020045 #12	C16orf89 (ENSRFEG00010020013) #13	NAGPA (ENSRFEG00010019960) #14	ENSRFEG00010019916	SEC14L5 (ENSRFEG00010019893) #15	PPL (ENSRFEG00010019841) #16	UBN1 (ENSRFEG00010019779) #17	GLYR1 (ENSRFEG00010019713) #18	ROGDI (ENSRFEG00010019625) #19	SMIM22 (ENSRFEG00010019585) #20	SEPTIN12 (ENSRFEG00010019455) #21	ENSRFEG00010019420 #22	DNAAF8 (ENSRFEG00010019337) #23	ANKS3 (ENSRFEG00010019177) #24	MGRN1 (ENSRFEG00010019038) #26	ENSRFEG00010018963 #27	ENSRFEG00010018922	ENSRFEG00010018817	ENSRFEG00010018717 #28	HMOX2 (ENSRFEG00010018676) #29	ENSRFEG00010018640	NMRAL1 (ENSRFEG00010018604) #30	DNAJA3 (ENSRFEG00010018552) #31	VASN (ENSRFEG00010018531) #32	CORO7 (ENSRFEG00010018434) #33	GLIS2 (ENSRFEG00010018393) #35	ENSRFEG00010018353 #34
Laurasiatheria_b	DUPLICATION
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.a ##22
Carnivora	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.a ##22
Caniformia	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.a ##22
Caniformia_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.a ##22
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.a ##22
Ursus	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.a ##22
Polar bear	MODERN SPECIES	189	ZBTB8A (ENSUMAG00000008349)	ZBTB8OS (ENSUMAG00000008343)	RBBP4 (ENSUMAG00000008331)	SYNC (ENSUMAG00000008330)	YARS1 (ENSUMAG00000008312)	S100PBP (ENSUMAG00000008307)	FNDC5 (ENSUMAG00000008305)	HPCA (ENSUMAG00000008299)	TMEM54 (ENSUMAG00000008294)	RNF19B (ENSUMAG00000008289)	ENSUMAG00000008273	AK2 (ENSUMAG00000008267)	AZIN2 (ENSUMAG00000008252)	TRIM62 (ENSUMAG00000008250)	PHC2 (ENSUMAG00000008226)	ENSUMAG00000008216 ##22	ZSCAN20 (ENSUMAG00000008212)	ENSUMAG00000008189	ENSUMAG00000008180	HMGB4 (ENSUMAG00000008162)	ENSUMAG00000008148	GJB5 (ENSUMAG00000008137)	ENSUMAG00000008132	GJB4 (ENSUMAG00000008127)	GJB3 (ENSUMAG00000008123)	GJA4 (ENSUMAG00000008121)	ENSUMAG00000008116	SMIM12 (ENSUMAG00000008110)	ZMYM6 (ENSUMAG00000008096)	ZMYM1 (ENSUMAG00000008070)	ENSUMAG00000008056
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Carnivora	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Caniformia	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Caniformia_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Ursus	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Polar bear	MODERN SPECIES	292																ENSUMAG00000003659 ##22	ENSUMAG00000003677	ENSUMAG00000003682	ENSUMAG00000003685	TRIM28 (ENSUMAG00000003709)	SLC27A5 (ENSUMAG00000003901)	ZNF446 (ENSUMAG00000003907)	ENSUMAG00000003911	ZNF132 (ENSUMAG00000003920)	ENSUMAG00000003925	ZNF584 (ENSUMAG00000003928)	RPS5 (ENSUMAG00000003934)	ZNF837 (ENSUMAG00000003940)	ZSCAN22 (ENSUMAG00000003953)	ENSUMAG00000003955	ZNF8 (ENSUMAG00000003960)
Felidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Panthera	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Tiger	MODERN SPECIES	539																ENSPTIG00000007563 ##22	CHMP2A (ENSPTIG00000007581)	TRIM28 (ENSPTIG00000007609)
Laurasiatheria_c	ANCESTRAL SPECIES	4																ENSGT00940000154740.a.b.b.g.b ##22	ENSGT00940000163935	ENSGT00940000163154.A.a.a	ENSGT00950000182890.A.b	ENSGT00940000162814	ENSGT00950000182832.A	ENSGT00940000160527	ENSGT00940000160859	ENSGT00940000157947	ENSGT00940000162092	ENSGT00940000164133	ENSGT00940000163047	ENSGT00940000163387	ENSGT00940000163291	ENSGT00940000163974	ENSGT00390000010806
Chiroptera	ANCESTRAL SPECIES	45																ENSGT00940000154740.a.b.b.g.b ##22	ENSGT00940000163935	ENSGT00940000163154.A.a.a	ENSGT00950000182890.A.b	ENSGT00940000162814	ENSGT00950000182832.A	ENSGT00940000160527	ENSGT00940000160859	ENSGT00940000157947	ENSGT00940000162092	ENSGT00940000164133	ENSGT00940000163047	ENSGT00940000163387	ENSGT00940000163291	ENSGT00940000163974	ENSGT00390000010806
Microchiroptera	ANCESTRAL SPECIES	44																ENSGT00940000154740.a.b.b.g.b ##22	ENSGT00940000163935	ENSGT00940000163154.A.a.a	ENSGT00950000182890.A.b	ENSGT00940000162814	ENSGT00950000182832.A	ENSGT00940000160527	ENSGT00940000160859	ENSGT00940000157947	ENSGT00940000162092	ENSGT00940000164133	ENSGT00940000163387	ENSGT00940000163291	ENSGT00940000163974	ENSGT00390000010806	ENSGT00940000169643
Microbat	MODERN SPECIES	1416															ENSMLUG00000029197	ENSMLUG00000027909 ##22	ENSMLUG00000014323	CHMP2A (ENSMLUG00000014318)	TRIM28 (ENSMLUG00000014308)	ENSMLUG00000006006	SLC27A5 (ENSMLUG00000002727)	ZNF446 (ENSMLUG00000001138)	ENSMLUG00000027626	ENSMLUG00000003488	RPS5 (ENSMLUG00000012641)	ENSMLUG00000000593	ENSMLUG00000014491	ENSMLUG00000014501	ENSMLUG00000014509	ENSMLUG00000016689	ENSMLUG00000014403
Equus	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.g.b ##22
Horse	MODERN SPECIES	1	IMPG1 (ENSECAG00000019440)	MYO6 (ENSECAG00000024053)	SENP6 (ENSECAG00000021001)	FILIP1 (ENSECAG00000018916)	TMEM30A (ENSECAG00000013904)	COX7A2 (ENSECAG00000012469)	COL12A1 (ENSECAG00000025065)	CD109 (ENSECAG00000023066)	SLC17A5 (ENSECAG00000015945)	EEF1A1 (ENSECAG00000020363)	ENSECAG00000055760	MTO1 (ENSECAG00000019823)	ENSECAG00000033497	CGAS (ENSECAG00000019809)	DDX43 (ENSECAG00000017971)	MZF1 (ENSECAG00000016471) ##22	MZF1 (ENSECAG00000055496)	ENSECAG00000038105	UBE2M (ENSECAG00000013447)	CHMP2A (ENSECAG00000013244)	TRIM28 (ENSECAG00000010774)	ZBTB45 (ENSECAG00000010390)	SLC27A5 (ENSECAG00000046881)	ZNF446 (ENSECAG00000016668)	ENSECAG00000016453	ENSECAG00000039942	ENSECAG00000047598	ZNF132 (ENSECAG00000053240)	ENSECAG00000054265	ZNF584 (ENSECAG00000016355)	RPS5 (ENSECAG00000016340)
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Suina	ANCESTRAL SPECIES	28	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000165652	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Pig	MODERN SPECIES	11	ABAT (ENSSSCG00000007909)	METTL22 (ENSSSCG00000007914)	TMEM114 (ENSSSCG00000007915) #7	RBFOX1 (ENSSSCG00000007917) #9	ENSSSCG00000007920 #11	ENSSSCG00000007919 #12	C16orf89 (ENSSSCG00000025072) #13	NAGPA (ENSSSCG00000007925) #14	SEC14L5 (ENSSSCG00000007926) #15	PPL (ENSSSCG00000007927) #16	UBN1 (ENSSSCG00000007924) #17	GLYR1 (ENSSSCG00000007931) #18	ENSSSCG00000007932 #19	SMIM22 (ENSSSCG00000061225) #20	SEPTIN12 (ENSSSCG00000007933) #21	ENSSSCG00000055551 #22	ANKS3 (ENSSSCG00000007939) #24	DNAAF8 (ENSSSCG00000007935) #23	NUDT16L1 (ENSSSCG00000035999) #25	MGRN1 (ENSSSCG00000007930) #26	ENSSSCG00000023603 #27	ENSSSCG00000007940	CDIP1 (ENSSSCG00000007941) #28	HMOX2 (ENSSSCG00000007942) #29	NMRAL1 (ENSSSCG00000007943) #30	DNAJA3 (ENSSSCG00000022874) #31	CORO7 (ENSSSCG00000007944) #33	VASN (ENSSSCG00000025561) #32	ENSSSCG00000007947 #34	GLIS2 (ENSSSCG00000023653) #35	TFAP4 (ENSSSCG00000040215) #36
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Camelidae	ANCESTRAL SPECIES	33										ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37
Arabian camel	MODERN SPECIES	41	CGAS (ENSCDRG00005011491)	MTO1 (ENSCDRG00005011418)	EEF1A1 (ENSCDRG00005011320)	ENSCDRG00005011264	ENSCDRG00005011228	SLC17A5 (ENSCDRG00005011165)	ENSCDRG00005011136	PPL (ENSCDRG00005011061) #16	ENSCDRG00005011040	ENSCDRG00005011009	UBN1 (ENSCDRG00005010928) #17	GLYR1 (ENSCDRG00005010438) #18	ROGDI (ENSCDRG00005010278) #19	SMIM22 (ENSCDRG00005010221) #20	SEPTIN12 (ENSCDRG00005009523) #21	ZNF500 (ENSCDRG00005009441) #22	ENSCDRG00005009372 #23	ANKS3 (ENSCDRG00005009160) #24	NUDT16L1 (ENSCDRG00005009076) #25	ENSCDRG00005009022	MGRN1 (ENSCDRG00005008749) #26	UBALD1 (ENSCDRG00005008631) #27	ENSCDRG00005008556 #28	HMOX2 (ENSCDRG00005008500) #29	NMRAL1 (ENSCDRG00005008411) #30	DNAJA3 (ENSCDRG00005008267) #31	VASN (ENSCDRG00005008248) #32	CORO7 (ENSCDRG00005008023) #33	PAM16 (ENSCDRG00005007984) #34	GLIS2 (ENSCDRG00005007951) #35	TFAP4 (ENSCDRG00005007912) #36
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Pecora	ANCESTRAL SPECIES	10	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Yarkand deer	MODERN SPECIES	1	TMEM186 (ENSCHYG00000004412)	ABAT (ENSCHYG00000004385)	METTL22 (ENSCHYG00000004331)	ENSCHYG00000004309 #7	RBFOX1 (ENSCHYG00000003963) #9	ENSCHYG00000003871 #10	ENSCHYG00000003813 #11	ENSCHYG00000003789 #12	C16orf89 (ENSCHYG00000003773) #13	NAGPA (ENSCHYG00000003719) #14	SEC14L5 (ENSCHYG00000003666) #15	PPL (ENSCHYG00000003555) #16	UBN1 (ENSCHYG00000003491) #17	GLYR1 (ENSCHYG00000003370) #18	SEPTIN12 (ENSCHYG00000003298) #21	ZNF500 (ENSCHYG00000003268) #22	ENSCHYG00000003247 #23	ANKS3 (ENSCHYG00000003184) #24	NUDT16L1 (ENSCHYG00000003147) #25	MGRN1 (ENSCHYG00000002923) #26	UBALD1 (ENSCHYG00000002858) #27	ENSCHYG00000002832	CDIP1 (ENSCHYG00000002807) #28	HMOX2 (ENSCHYG00000002778) #29	NMRAL1 (ENSCHYG00000002755) #30	DNAJA3 (ENSCHYG00000002729) #31	VASN (ENSCHYG00000002711) #32	CORO7 (ENSCHYG00000002512) #33	GLIS2 (ENSCHYG00000002461) #35	TFAP4 (ENSCHYG00000002444) #36	SRL (ENSCHYG00000002415) #37
Percora_a	ANCESTRAL SPECIES	9	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00390000003248.a.b.a.a	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Bovidae	ANCESTRAL SPECIES	11	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00390000003248.a.b.a.a	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Bovinae	ANCESTRAL SPECIES	7	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00390000003248.a.b.a.a	ENSGT00940000155280.a #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
American bison	DUPLICATION
American bison	MODERN SPECIES	3297																ENSBBBG00000011913 #22	UBE2M (ENSBBBG00000001975)	CHMP2A (ENSBBBG00000002219)	TRIM28 (ENSBBBG00000011896)	ENSBBBG00000011864	SLC27A5 (ENSBBBG00000011858)	ZNF446 (ENSBBBG00000011849)	ZNF132 (ENSBBBG00000011834)	ZNF584 (ENSBBBG00000002198)	RPS5 (ENSBBBG00000011813)	ENSBBBG00000011786	ENSBBBG00000002189	ENSBBBG00000011769	ZNF274 (ENSBBBG00000002185)	ZNF329 (ENSBBBG00000011750)	ZNF606 (ENSBBBG00000007973)
American bison	MODERN SPECIES	3067	METTL22 (ENSBBBG00000019854)	TMEM114 (ENSBBBG00000019872) #7	ENSBBBG00000019884	RBFOX1 (ENSBBBG00000005513) #9	ENSBBBG00000000663 #10	ENSBBBG00000020564 #11	ENSBBBG00000020619 #12	C16orf89 (ENSBBBG00000020629) #13	NAGPA (ENSBBBG00000000501) #14	SEC14L5 (ENSBBBG00000005580) #15	PPL (ENSBBBG00000020802) #16	UBN1 (ENSBBBG00000020915) #17	GLYR1 (ENSBBBG00000021009) #18	ROGDI (ENSBBBG00000021026) #19	SEPTIN12 (ENSBBBG00000021093) #21	ENSBBBG00000021106 #22	ENSBBBG00000021111 #22	ENSBBBG00000005662 #23	ANKS3 (ENSBBBG00000021213) #24	NUDT16L1 (ENSBBBG00000005679) #25	MGRN1 (ENSBBBG00000005698) #26	UBALD1 (ENSBBBG00000021360) #27	ENSBBBG00000021415	HMOX2 (ENSBBBG00000021467) #29	NMRAL1 (ENSBBBG00000021504) #30	ENSBBBG00000021513	ENSBBBG00000005736 #31	CORO7 (ENSBBBG00000021609) #33	PAM16 (ENSBBBG00000021616) #34	GLIS2 (ENSBBBG00000021638) #35	TFAP4 (ENSBBBG00000021691) #36
American bison	MODERN SPECIES	3067	TMEM114 (ENSBBBG00000019872) #7	ENSBBBG00000019884	RBFOX1 (ENSBBBG00000005513) #9	ENSBBBG00000000663 #10	ENSBBBG00000020564 #11	ENSBBBG00000020619 #12	C16orf89 (ENSBBBG00000020629) #13	NAGPA (ENSBBBG00000000501) #14	SEC14L5 (ENSBBBG00000005580) #15	PPL (ENSBBBG00000020802) #16	UBN1 (ENSBBBG00000020915) #17	GLYR1 (ENSBBBG00000021009) #18	ROGDI (ENSBBBG00000021026) #19	SEPTIN12 (ENSBBBG00000021093) #21	ENSBBBG00000021106 #22	ENSBBBG00000021111 #22	ENSBBBG00000005662 #23	ANKS3 (ENSBBBG00000021213) #24	NUDT16L1 (ENSBBBG00000005679) #25	MGRN1 (ENSBBBG00000005698) #26	UBALD1 (ENSBBBG00000021360) #27	ENSBBBG00000021415	HMOX2 (ENSBBBG00000021467) #29	NMRAL1 (ENSBBBG00000021504) #30	ENSBBBG00000021513	ENSBBBG00000005736 #31	CORO7 (ENSBBBG00000021609) #33	PAM16 (ENSBBBG00000021616) #34	GLIS2 (ENSBBBG00000021638) #35	TFAP4 (ENSBBBG00000021691) #36	SRL (ENSBBBG00000021705) #37
Bos	ANCESTRAL SPECIES	9	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00390000003248.a.b.a.a	ENSGT00940000155280.a #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Bos_a	ANCESTRAL SPECIES	13	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280.a #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Domestic yak	MODERN SPECIES	18	ABAT (ENSBGRG00000007496)	METTL22 (ENSBGRG00000008284)	TMEM114 (ENSBGRG00000008795) #7	RBFOX1 (ENSBGRG00000008996) #9	ENSBGRG00000010442 #10	ENSBGRG00000010556 #11	ENSBGRG00000012040 #12	C16orf89 (ENSBGRG00000012299) #13	NAGPA (ENSBGRG00000012355) #14	SEC14L5 (ENSBGRG00000012622) #15	PPL (ENSBGRG00000012786) #16	UBN1 (ENSBGRG00000012919) #17	GLYR1 (ENSBGRG00000013243) #18	ROGDI (ENSBGRG00000013318) #19	SEPTIN12 (ENSBGRG00000013516) #21	ENSBGRG00000013763 #22	ENSBGRG00000013794 #23	ANKS3 (ENSBGRG00000013894) #24	NUDT16L1 (ENSBGRG00000014137) #25	ENSBGRG00000014218	MGRN1 (ENSBGRG00000014270) #26	UBALD1 (ENSBGRG00000014511) #27	C16orf96 (ENSBGRG00000014559)	CDIP1 (ENSBGRG00000014748) #28	HMOX2 (ENSBGRG00000014893) #29	NMRAL1 (ENSBGRG00000014975) #30	DNAJA3 (ENSBGRG00000015126) #31	VASN (ENSBGRG00000015841) #32	PAM16 (ENSBGRG00000015868) #34	GLIS2 (ENSBGRG00000015957) #35	TFAP4 (ENSBGRG00000016073) #36
Wild yak	DUPLICATION
Wild yak	MODERN SPECIES	2428														ENSBMUG00000017988	ENSBMUG00000017975	ENSBMUG00000017965 #22
Wild yak	MODERN SPECIES	112					ENSBMUG00000009874 #10	ENSBMUG00000009887 #11	ENSBMUG00000009906 #12	C16orf89 (ENSBMUG00000009917) #13	NAGPA (ENSBMUG00000009956) #14	SEC14L5 (ENSBMUG00000009979) #15	PPL (ENSBMUG00000010117) #16	UBN1 (ENSBMUG00000010229) #17	GLYR1 (ENSBMUG00000010269) #18	ROGDI (ENSBMUG00000010307) #19	SEPTIN12 (ENSBMUG00000010378) #21	ENSBMUG00000010393 #22	ENSBMUG00000010398 #22	ENSBMUG00000010411 #23	ANKS3 (ENSBMUG00000010436) #24	NUDT16L1 (ENSBMUG00000010465) #25	MGRN1 (ENSBMUG00000010647) #26	ENSBMUG00000010708 #27	ENSBMUG00000010734	ENSBMUG00000010769	HMOX2 (ENSBMUG00000010787) #29	NMRAL1 (ENSBMUG00000010804) #30
Wild yak	MODERN SPECIES	112				ENSBMUG00000009874 #10	ENSBMUG00000009887 #11	ENSBMUG00000009906 #12	C16orf89 (ENSBMUG00000009917) #13	NAGPA (ENSBMUG00000009956) #14	SEC14L5 (ENSBMUG00000009979) #15	PPL (ENSBMUG00000010117) #16	UBN1 (ENSBMUG00000010229) #17	GLYR1 (ENSBMUG00000010269) #18	ROGDI (ENSBMUG00000010307) #19	SEPTIN12 (ENSBMUG00000010378) #21	ENSBMUG00000010393 #22	ENSBMUG00000010398 #22	ENSBMUG00000010411 #23	ANKS3 (ENSBMUG00000010436) #24	NUDT16L1 (ENSBMUG00000010465) #25	MGRN1 (ENSBMUG00000010647) #26	ENSBMUG00000010708 #27	ENSBMUG00000010734	ENSBMUG00000010769	HMOX2 (ENSBMUG00000010787) #29	NMRAL1 (ENSBMUG00000010804) #30
Bos_b	ANCESTRAL SPECIES	6	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00390000003248.a.b.a.a	ENSGT00940000155280.a #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Hybrid Bos Indicus	MODERN SPECIES	17	METTL22 (ENSBIXG00005005382)	TMEM114 (ENSBIXG00005011505) #7	RBFOX1 (ENSBIXG00005005915) #9	ENSBIXG00005010762	ENSBIXG00005010705 #10	ENSBIXG00005010656 #11	ENSBIXG00005010531 #12	C16orf89 (ENSBIXG00005010499) #13	NAGPA (ENSBIXG00005010476) #14	SEC14L5 (ENSBIXG00005000737) #15	PPL (ENSBIXG00005010415) #16	UBN1 (ENSBIXG00005010369) #17	GLYR1 (ENSBIXG00005010289) #18	ROGDI (ENSBIXG00005010195) #19	SEPTIN12 (ENSBIXG00005006417) #21	ZNF500 (ENSBIXG00005010060) #22	ENSBIXG00005010044 #23	ANKS3 (ENSBIXG00005000759) #24	NUDT16L1 (ENSBIXG00005009954) #25	MGRN1 (ENSBIXG00005009916) #26	UBALD1 (ENSBIXG00005009790) #27	C16orf96 (ENSBIXG00005009767)	CDIP1 (ENSBIXG00005009692) #28	HMOX2 (ENSBIXG00005009623) #29	NMRAL1 (ENSBIXG00005009546) #30	ENSBIXG00005009493 #31	CORO7 (ENSBIXG00005000496) #33	VASN (ENSBIXG00005009372) #32	ENSBIXG00005009361 #34	GLIS2 (ENSBIXG00005009329) #35	TFAP4 (ENSBIXG00005000476) #36
Cow	DUPLICATION
Cow	MODERN SPECIES	17	ABAT (ENSBTAG00000004038)	METTL22 (ENSBTAG00000035782)	TMEM114 (ENSBTAG00000026381) #7	RBFOX1 (ENSBTAG00000007210) #9	ENSBTAG00000026383 #10	EEF2KMT (ENSBTAG00000008222) #11	ALG1 (ENSBTAG00000002189) #12	C25H16orf89 (ENSBTAG00000002188) #13	NAGPA (ENSBTAG00000007896) #14	SEC14L5 (ENSBTAG00000007890) #15	PPL (ENSBTAG00000002178) #16	UBN1 (ENSBTAG00000001736) #17	GLYR1 (ENSBTAG00000001731) #18	ROGDI (ENSBTAG00000016331) #19	SEPTIN12 (ENSBTAG00000016330) #21	ZNF500 (ENSBTAG00000037566) #22	ENSBTAG00000049109	ENSBTAG00000051258 #22	DNAAF8 (ENSBTAG00000006595) #23	ANKS3 (ENSBTAG00000006593) #24	NUDT16L1 (ENSBTAG00000006590) #25	MGRN1 (ENSBTAG00000018999) #26	UBALD1 (ENSBTAG00000026394) ##27	ENSBTAG00000047316	CDIP1 (ENSBTAG00000018938) #28	HMOX2 (ENSBTAG00000018937) #29	NMRAL1 (ENSBTAG00000010015) #30	ENSBTAG00000053639	DNAJA3 (ENSBTAG00000010013) #31	VASN (ENSBTAG00000046339) #32	CORO7 (ENSBTAG00000009201) #33
Cow	MODERN SPECIES	17	TMEM114 (ENSBTAG00000026381) #7	RBFOX1 (ENSBTAG00000007210) #9	ENSBTAG00000026383 #10	EEF2KMT (ENSBTAG00000008222) #11	ALG1 (ENSBTAG00000002189) #12	C25H16orf89 (ENSBTAG00000002188) #13	NAGPA (ENSBTAG00000007896) #14	SEC14L5 (ENSBTAG00000007890) #15	PPL (ENSBTAG00000002178) #16	UBN1 (ENSBTAG00000001736) #17	GLYR1 (ENSBTAG00000001731) #18	ROGDI (ENSBTAG00000016331) #19	SEPTIN12 (ENSBTAG00000016330) #21	ZNF500 (ENSBTAG00000037566) #22	ENSBTAG00000049109	ENSBTAG00000051258 #22	DNAAF8 (ENSBTAG00000006595) #23	ANKS3 (ENSBTAG00000006593) #24	NUDT16L1 (ENSBTAG00000006590) #25	MGRN1 (ENSBTAG00000018999) #26	UBALD1 (ENSBTAG00000026394) ##27	ENSBTAG00000047316	CDIP1 (ENSBTAG00000018938) #28	HMOX2 (ENSBTAG00000018937) #29	NMRAL1 (ENSBTAG00000010015) #30	ENSBTAG00000053639	DNAJA3 (ENSBTAG00000010013) #31	VASN (ENSBTAG00000046339) #32	CORO7 (ENSBTAG00000009201) #33	PAM16 (ENSBTAG00000009200) #34	GLIS2 (ENSBTAG00000009199) #35
Caprinae	ANCESTRAL SPECIES	7	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00390000003248.a.b.a.a	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	16	METTL22 (ENSOARG00020013721)	TMEM114 (ENSOARG00020013574) #7	ENSOARG00020013492	RBFOX1 (ENSOARG00020010279) #9	ENSOARG00020009896 #10	ENSOARG00020009147 #11	ENSOARG00020008901 #12	C16orf89 (ENSOARG00020008849) #13	NAGPA (ENSOARG00020008674) #14	SEC14L5 (ENSOARG00020008546) #15	PPL (ENSOARG00020008160) #16	UBN1 (ENSOARG00020008063) #17	GLYR1 (ENSOARG00020007618) #18	ROGDI (ENSOARG00020007572) #19	SEPTIN12 (ENSOARG00020007412) #21	ENSOARG00020007382 #22	ENSOARG00020007339 #22	ENSOARG00020007269 #23	ANKS3 (ENSOARG00020006671) #24	NUDT16L1 (ENSOARG00020006513) #25	MGRN1 (ENSOARG00020006372) #26	UBALD1 (ENSOARG00020026479) #27	ENSOARG00020026478	CDIP1 (ENSOARG00020026477) #28	HMOX2 (ENSOARG00020026476) #29	NMRAL1 (ENSOARG00020026475) #30	ENSOARG00020026474	ENSOARG00020026473	DNAJA3 (ENSOARG00020026472) #31	VASN (ENSOARG00020026471) #32	CORO7 (ENSOARG00020026470) #33
Rambouillet Sheep	MODERN SPECIES	16	TMEM114 (ENSOARG00020013574) #7	ENSOARG00020013492	RBFOX1 (ENSOARG00020010279) #9	ENSOARG00020009896 #10	ENSOARG00020009147 #11	ENSOARG00020008901 #12	C16orf89 (ENSOARG00020008849) #13	NAGPA (ENSOARG00020008674) #14	SEC14L5 (ENSOARG00020008546) #15	PPL (ENSOARG00020008160) #16	UBN1 (ENSOARG00020008063) #17	GLYR1 (ENSOARG00020007618) #18	ROGDI (ENSOARG00020007572) #19	SEPTIN12 (ENSOARG00020007412) #21	ENSOARG00020007382 #22	ENSOARG00020007339 #22	ENSOARG00020007269 #23	ANKS3 (ENSOARG00020006671) #24	NUDT16L1 (ENSOARG00020006513) #25	MGRN1 (ENSOARG00020006372) #26	UBALD1 (ENSOARG00020026479) #27	ENSOARG00020026478	CDIP1 (ENSOARG00020026477) #28	HMOX2 (ENSOARG00020026476) #29	NMRAL1 (ENSOARG00020026475) #30	ENSOARG00020026474	ENSOARG00020026473	DNAJA3 (ENSOARG00020026472) #31	VASN (ENSOARG00020026471) #32	CORO7 (ENSOARG00020026470) #33	GLIS2 (ENSOARG00020026469) #35
Goat	DUPLICATION
Goat	MODERN SPECIES	17	ABAT (ENSCHIG00000022188)	METTL22 (ENSCHIG00000001854)	TMEM114 (ENSCHIG00000024853) #7	RBFOX1 (ENSCHIG00000023549) #9	ENSCHIG00000009255 #10	ENSCHIG00000015073 #11	ENSCHIG00000012024 #12	C16orf89 (ENSCHIG00000013991) #13	NAGPA (ENSCHIG00000022979) #14	SEC14L5 (ENSCHIG00000020056) #15	PPL (ENSCHIG00000011770) #16	UBN1 (ENSCHIG00000024105) #17	GLYR1 (ENSCHIG00000023808) #18	ROGDI (ENSCHIG00000005396) #19	SEPTIN12 (ENSCHIG00000013270) #21	ENSCHIG00000005078 #22	ENSCHIG00000008404 #22	ENSCHIG00000002545 #23	ANKS3 (ENSCHIG00000016977) #24	NUDT16L1 (ENSCHIG00000005777) #25	MGRN1 (ENSCHIG00000008936) #26	UBALD1 (ENSCHIG00000006302) #27	ENSCHIG00000016185	CDIP1 (ENSCHIG00000017100) #28	HMOX2 (ENSCHIG00000026356) #29	NMRAL1 (ENSCHIG00000015974) #30	ENSCHIG00000020178	ENSCHIG00000014585	DNAJA3 (ENSCHIG00000017630) #31	VASN (ENSCHIG00000001960) #32	CORO7 (ENSCHIG00000010358) #33
Goat	MODERN SPECIES	17	METTL22 (ENSCHIG00000001854)	TMEM114 (ENSCHIG00000024853) #7	RBFOX1 (ENSCHIG00000023549) #9	ENSCHIG00000009255 #10	ENSCHIG00000015073 #11	ENSCHIG00000012024 #12	C16orf89 (ENSCHIG00000013991) #13	NAGPA (ENSCHIG00000022979) #14	SEC14L5 (ENSCHIG00000020056) #15	PPL (ENSCHIG00000011770) #16	UBN1 (ENSCHIG00000024105) #17	GLYR1 (ENSCHIG00000023808) #18	ROGDI (ENSCHIG00000005396) #19	SEPTIN12 (ENSCHIG00000013270) #21	ENSCHIG00000005078 #22	ENSCHIG00000008404 #22	ENSCHIG00000002545 #23	ANKS3 (ENSCHIG00000016977) #24	NUDT16L1 (ENSCHIG00000005777) #25	MGRN1 (ENSCHIG00000008936) #26	UBALD1 (ENSCHIG00000006302) #27	ENSCHIG00000016185	CDIP1 (ENSCHIG00000017100) #28	HMOX2 (ENSCHIG00000026356) #29	NMRAL1 (ENSCHIG00000015974) #30	ENSCHIG00000020178	ENSCHIG00000014585	DNAJA3 (ENSCHIG00000017630) #31	VASN (ENSCHIG00000001960) #32	CORO7 (ENSCHIG00000010358) #33	ENSCHIG00000005280 #34
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	211	METTL22 (ENSMMSG00000012135)	TMEM114 (ENSMMSG00000012060) #7	ENSMMSG00000012039	RBFOX1 (ENSMMSG00000008524) #9	ENSMMSG00000008293 #10	ENSMMSG00000008144 #11	ENSMMSG00000008106 #12	C16orf89 (ENSMMSG00000008051) #13	NAGPA (ENSMMSG00000008003) #14	SEC14L5 (ENSMMSG00000007977) #15	PPL (ENSMMSG00000007856) #16	UBN1 (ENSMMSG00000007783) #17	GLYR1 (ENSMMSG00000007656) #18	ROGDI (ENSMMSG00000007602) #19	SEPTIN12 (ENSMMSG00000007493) #21	ENSMMSG00000007463 #22	ENSMMSG00000007446 #22	ENSMMSG00000007425 #23	ANKS3 (ENSMMSG00000007327) #24	NUDT16L1 (ENSMMSG00000007265) #25	MGRN1 (ENSMMSG00000007134) #26	UBALD1 (ENSMMSG00000007082) #27	ENSMMSG00000007041	CDIP1 (ENSMMSG00000006985) #28	HMOX2 (ENSMMSG00000006939) #29	NMRAL1 (ENSMMSG00000006906) #30	ENSMMSG00000006888	DNAJA3 (ENSMMSG00000006755) #31
Siberian musk deer	MODERN SPECIES	211	TMEM114 (ENSMMSG00000012060) #7	ENSMMSG00000012039	RBFOX1 (ENSMMSG00000008524) #9	ENSMMSG00000008293 #10	ENSMMSG00000008144 #11	ENSMMSG00000008106 #12	C16orf89 (ENSMMSG00000008051) #13	NAGPA (ENSMMSG00000008003) #14	SEC14L5 (ENSMMSG00000007977) #15	PPL (ENSMMSG00000007856) #16	UBN1 (ENSMMSG00000007783) #17	GLYR1 (ENSMMSG00000007656) #18	ROGDI (ENSMMSG00000007602) #19	SEPTIN12 (ENSMMSG00000007493) #21	ENSMMSG00000007463 #22	ENSMMSG00000007446 #22	ENSMMSG00000007425 #23	ANKS3 (ENSMMSG00000007327) #24	NUDT16L1 (ENSMMSG00000007265) #25	MGRN1 (ENSMMSG00000007134) #26	UBALD1 (ENSMMSG00000007082) #27	ENSMMSG00000007041	CDIP1 (ENSMMSG00000006985) #28	HMOX2 (ENSMMSG00000006939) #29	NMRAL1 (ENSMMSG00000006906) #30	ENSMMSG00000006888	DNAJA3 (ENSMMSG00000006755) #31
Cetacea	ANCESTRAL SPECIES	3	ENSGT00390000011615.B #7	ENSGT00940000154326.a.b.b	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00390000013102.f.q.b	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00510000048539	ENSGT00390000007560.p	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00390000013102.f.q.b	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00510000048539	ENSGT00390000007560.p	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37
Dolphin	MODERN SPECIES	3207									ENSTTRG00000005535 #14	SEC14L5 (ENSTTRG00000005530) #15	PPL (ENSTTRG00000005525) #16	UBN1 (ENSTTRG00000005518) #17	GLYR1 (ENSTTRG00000005510) #18	ROGDI (ENSTTRG00000005502) #19	SEPTIN12 (ENSTTRG00000005489) #21	ZNF500 (ENSTTRG00000005480) #22	DNAAF8 (ENSTTRG00000005461) #23	ANKS3 (ENSTTRG00000005450) #24	NUDT16L1 (ENSTTRG00000005439) #25	MGRN1 (ENSTTRG00000005414) #26	ENSTTRG00000005406	CDIP1 (ENSTTRG00000005386) #28	HMOX2 (ENSTTRG00000005378) #29	NMRAL1 (ENSTTRG00000005359) #30	DNAJA3 (ENSTTRG00000005347) #31
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00390000007560.p	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154531.l	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00390000013102.e.a.d	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00390000011615.B #7	ENSGT00940000153095.g.b.a.a.b.k	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154531.l	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00390000013102.e.a.d	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Beluga whale	MODERN SPECIES	48	ENSDLEG00000015979	ENSDLEG00000015968	RBFOX1 (ENSDLEG00000015877) #9	ENSDLEG00000015860	ENSDLEG00000015842 #10	EEF2KMT (ENSDLEG00000015825) #11	ALG1 (ENSDLEG00000015810) #12	NAGPA (ENSDLEG00000015799) #14	SEC14L5 (ENSDLEG00000015744) #15	PPL (ENSDLEG00000015662) #16	UBN1 (ENSDLEG00000015636) #17	GLYR1 (ENSDLEG00000015608) #18	ROGDI (ENSDLEG00000015583) #19	SEPTIN12 (ENSDLEG00000015556) #21	ENSDLEG00000015548	ZNF500 (ENSDLEG00000015538) #22	ENSDLEG00000015530 #23	ANKS3 (ENSDLEG00000015511) #24	NUDT16L1 (ENSDLEG00000015504) #25	MGRN1 (ENSDLEG00000015407) #26	UBALD1 (ENSDLEG00000015378) #27	CDIP1 (ENSDLEG00000015367) #28	HMOX2 (ENSDLEG00000015355) #29	NMRAL1 (ENSDLEG00000015344) #30	DNAJA3 (ENSDLEG00000015292) #31	ENSDLEG00000015275	VASN (ENSDLEG00000015267) #32	CORO7 (ENSDLEG00000015185) #33	PAM16 (ENSDLEG00000015139) #34	GLIS2 (ENSDLEG00000015124) #35	TFAP4 (ENSDLEG00000015107) #36
Narwhal	MODERN SPECIES	299	TMEM114 (ENSMMNG00015005026) #7	ENSMMNG00015005013	RBFOX1 (ENSMMNG00015004838) #9	ENSMMNG00015004798 #10	ENSMMNG00015004793 #11	ENSMMNG00015004785 #12	NAGPA (ENSMMNG00015004776) #14	SEC14L5 (ENSMMNG00015004764) #15	PPL (ENSMMNG00015004753) #16	UBN1 (ENSMMNG00015004730) #17	GLYR1 (ENSMMNG00015004666) #18	ROGDI (ENSMMNG00015004646) #19	SMIM22 (ENSMMNG00015004640) #20	SEPTIN12 (ENSMMNG00015004634) #21	ENSMMNG00015004624	ZNF500 (ENSMMNG00015004613) #22	DNAAF8 (ENSMMNG00015004600) #23	ANKS3 (ENSMMNG00015009183) #24	NUDT16L1 (ENSMMNG00015009164) #25	MGRN1 (ENSMMNG00015009053) #26	UBALD1 (ENSMMNG00015008992) #27	CDIP1 (ENSMMNG00015008973) #28	HMOX2 (ENSMMNG00015008946) #29	NMRAL1 (ENSMMNG00015008931) #30	DNAJA3 (ENSMMNG00015008893) #31	ENSMMNG00015008878	VASN (ENSMMNG00015008873) #32	CORO7 (ENSMMNG00015008837) #33	PAM16 (ENSMMNG00015008811) #34	GLIS2 (ENSMMNG00015008801) #35	TFAP4 (ENSMMNG00015008791) #36
Vaquita	MODERN SPECIES	6	TMEM114 (ENSPSNG00000009880) #7	ENSPSNG00000009828	RBFOX1 (ENSPSNG00000009035) #9	ENSPSNG00000008540 #10	ENSPSNG00000008216 #11	ENSPSNG00000008101 #12	NAGPA (ENSPSNG00000008041) #14	SEC14L5 (ENSPSNG00000007927) #15	PPL (ENSPSNG00000007678) #16	UBN1 (ENSPSNG00000007508) #17	GLYR1 (ENSPSNG00000007358) #18	ROGDI (ENSPSNG00000007270) #19	SMIM22 (ENSPSNG00000007204) #20	SEPTIN12 (ENSPSNG00000007088) #21	ENSPSNG00000007035	ZNF500 (ENSPSNG00000007011) #22	ENSPSNG00000006940 #23	ANKS3 (ENSPSNG00000006816) #24	NUDT16L1 (ENSPSNG00000006720) #25	MGRN1 (ENSPSNG00000006589) #26	UBALD1 (ENSPSNG00000006498) #27	CDIP1 (ENSPSNG00000006450) #28	HMOX2 (ENSPSNG00000006393) #29	NMRAL1 (ENSPSNG00000006343) #30	DNAJA3 (ENSPSNG00000006246) #31	ENSPSNG00000006205	VASN (ENSPSNG00000006188) #32	CORO7 (ENSPSNG00000006145) #33	PAM16 (ENSPSNG00000006075) #34	GLIS2 (ENSPSNG00000006050) #35	TFAP4 (ENSPSNG00000006029) #36
Sperm whale	MODERN SPECIES	1249												ROGDI (ENSPCTG00005012199) #19	SMIM22 (ENSPCTG00005012256) #20	SEPTIN12 (ENSPCTG00005012376) #21	ENSPCTG00005012772	ZNF500 (ENSPCTG00005012789) #22
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	10													ENSBMSG00010020854	ENSBMSG00010020868	ENSBMSG00010020880	ENSBMSG00010020891 #22	ENSBMSG00010020903 #22	UBE2M (ENSBMSG00010020915)	ENSBMSG00010020931	TRIM28 (ENSBMSG00010020962)	SLC27A5 (ENSBMSG00010021011)	ENSBMSG00010021053	ENSBMSG00010021108	ENSBMSG00010021122	ENSBMSG00010021161	ZNF132 (ENSBMSG00010014048)	ENSBMSG00010014078	RNF225 (ENSBMSG00010014120)	RPS5 (ENSBMSG00010014164)	ENSBMSG00010014335	ENSBMSG00010014428
Blue whale	MODERN SPECIES	6	TMEM114 (ENSBMSG00010021831) #7	ENSBMSG00010021826	ENSBMSG00010021823	RBFOX1 (ENSBMSG00010019897) #9	ENSBMSG00010018445 #11	ENSBMSG00010018342 #12	C16orf89 (ENSBMSG00010018301) #13	NAGPA (ENSBMSG00010018223) #14	SEC14L5 (ENSBMSG00010018123) #15	PPL (ENSBMSG00010017274) #16	UBN1 (ENSBMSG00010017073) #17	GLYR1 (ENSBMSG00010017020) #18	ROGDI (ENSBMSG00010016995) #19	SMIM22 (ENSBMSG00010016941) #20	SEPTIN12 (ENSBMSG00010016826) #21	ZNF500 (ENSBMSG00010016789) #22	DNAAF8 (ENSBMSG00010016745) #23	ANKS3 (ENSBMSG00010016576) #24	MGRN1 (ENSBMSG00010016406) #26	UBALD1 (ENSBMSG00010016288) #27	ENSBMSG00010016240	CDIP1 (ENSBMSG00010016190) #28	HMOX2 (ENSBMSG00010016140) #29	NMRAL1 (ENSBMSG00010016112) #30	DNAJA3 (ENSBMSG00010016048) #31	ENSBMSG00010016012	VASN (ENSBMSG00010016003) #32	CORO7 (ENSBMSG00010015723) #33	GLIS2 (ENSBMSG00010015632) #35	TFAP4 (ENSBMSG00010015602) #36	SRL (ENSBMSG00010015551) #37
Blue whale	MODERN SPECIES	10												ENSBMSG00010020854	ENSBMSG00010020868	ENSBMSG00010020880	ENSBMSG00010020891 #22	ENSBMSG00010020903 #22	UBE2M (ENSBMSG00010020915)	ENSBMSG00010020931	TRIM28 (ENSBMSG00010020962)	SLC27A5 (ENSBMSG00010021011)	ENSBMSG00010021053	ENSBMSG00010021108	ENSBMSG00010021122	ENSBMSG00010021161	ZNF132 (ENSBMSG00010014048)	ENSBMSG00010014078	RNF225 (ENSBMSG00010014120)	RPS5 (ENSBMSG00010014164)	ENSBMSG00010014335	ENSBMSG00010014428	ZSCAN22 (ENSBMSG00010014486)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Hedgehog	MODERN SPECIES	693																ENSEEUG00000012405 #22
Common shrew	MODERN SPECIES	333																ENSSARG00000004585 #22
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00940000180007	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Primates	ANCESTRAL SPECIES	11	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES	24	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.a #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Lemuriformes	ANCESTRAL SPECIES	27	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003.e #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.a #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Mouse lemur	MODERN SPECIES	8	METTL22 (ENSMICG00000015173)	TMEM114 (ENSMICG00000041502) #7	RBFOX1 (ENSMICG00000034286) #9	ENSMICG00000016032 #11	ENSMICG00000016018 #12	C16orf89 (ENSMICG00000016010) #13	NAGPA (ENSMICG00000016002) #14	SEC14L5 (ENSMICG00000015988) #15	PPL (ENSMICG00000015966) #16	UBN1 (ENSMICG00000015950) #17	GLYR1 (ENSMICG00000015933) #18	ROGDI (ENSMICG00000015926) #19	SMIM22 (ENSMICG00000041932) #20	SEPTIN12 (ENSMICG00000015913) #21	ENSMICG00000046808 #22	ZNF500 (ENSMICG00000015905) #22	DNAAF8 (ENSMICG00000015894) #23	ANKS3 (ENSMICG00000015881) #24	NUDT16L1 (ENSMICG00000015871) #25	MGRN1 (ENSMICG00000015855) #26	UBALD1 (ENSMICG00000006782) #27	C16orf96 (ENSMICG00000046975)	CDIP1 (ENSMICG00000017825) #28	HMOX2 (ENSMICG00000017824) #29	NMRAL1 (ENSMICG00000017823) #30	DNAJA3 (ENSMICG00000017821) #31	CORO7 (ENSMICG00000017819) #33	PAM16 (ENSMICG00000042422) #34	GLIS2 (ENSMICG00000047824) #35	TFAP4 (ENSMICG00000033646) #36	SRL (ENSMICG00000032307) #37
Lemuriformes_a	ANCESTRAL SPECIES	23	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003.e #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b.a #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Coquerels sifaka	MODERN SPECIES	384	ABAT (ENSPCOG00000017674)	METTL22 (ENSPCOG00000015054)	TMEM114 (ENSPCOG00000018000) #7	RBFOX1 (ENSPCOG00000025687) #9	ENSPCOG00000027441 #11	ENSPCOG00000023899 #12	C16orf89 (ENSPCOG00000028274) #13	NAGPA (ENSPCOG00000017369) #14	SEC14L5 (ENSPCOG00000020120) #15	PPL (ENSPCOG00000027149) #16	UBN1 (ENSPCOG00000021605) #17	GLYR1 (ENSPCOG00000007495) #18	ROGDI (ENSPCOG00000015279) #19	SMIM22 (ENSPCOG00000005306) #20	SEPTIN12 (ENSPCOG00000014037) #21	ZNF500 (ENSPCOG00000022916) #22	DNAAF8 (ENSPCOG00000018126) #23	ANKS3 (ENSPCOG00000019352) #24	NUDT16L1 (ENSPCOG00000025103) #25	MGRN1 (ENSPCOG00000005503) #26	UBALD1 (ENSPCOG00000023548) #27	C16orf96 (ENSPCOG00000014559)	CDIP1 (ENSPCOG00000016043) #28	HMOX2 (ENSPCOG00000026695) #29	NMRAL1 (ENSPCOG00000017936) #30	DNAJA3 (ENSPCOG00000024239) #31	CORO7 (ENSPCOG00000023387) #33	PAM16 (ENSPCOG00000025166) #34	GLIS2 (ENSPCOG00000026948) #35	TFAP4 (ENSPCOG00000000245) #36	SRL (ENSPCOG00000023135) #37
Greater bamboo lemur	MODERN SPECIES	223					ENSPSMG00000024807 #11	ENSPSMG00000024773 #12	C16orf89 (ENSPSMG00000024744) #13	NAGPA (ENSPSMG00000024743) #14	SEC14L5 (ENSPSMG00000024734) #15	PPL (ENSPSMG00000024715) #16	UBN1 (ENSPSMG00000024678) #17	GLYR1 (ENSPSMG00000024659) #18	ROGDI (ENSPSMG00000024626) #19	SMIM22 (ENSPSMG00000024599) #20	SEPTIN12 (ENSPSMG00000024592) #21	ZNF500 (ENSPSMG00000024580) #22	DNAAF8 (ENSPSMG00000024571) #23	ANKS3 (ENSPSMG00000024562) #24	NUDT16L1 (ENSPSMG00000024533) #25	MGRN1 (ENSPSMG00000024519) #26	UBALD1 (ENSPSMG00000024390) #27	CDIP1 (ENSPSMG00000024376) #28	HMOX2 (ENSPSMG00000024373) #29	NMRAL1 (ENSPSMG00000024362) #30
Bushbaby	MODERN SPECIES	159				RBFOX1 (ENSOGAG00000025535) #9	ENSOGAG00000034732 #10	ENSOGAG00000034226 #11	ENSOGAG00000000227 #12	C16orf89 (ENSOGAG00000000225) #13	ENSOGAG00000000224 #14	SEC14L5 (ENSOGAG00000000222) #15	PPL (ENSOGAG00000000221) #16	UBN1 (ENSOGAG00000000220) #17	GLYR1 (ENSOGAG00000000219) #18	ROGDI (ENSOGAG00000000218) #19	SEPTIN12 (ENSOGAG00000025966) #21	ZNF500 (ENSOGAG00000000217) #22	DNAAF8 (ENSOGAG00000034347) #23	ANKS3 (ENSOGAG00000030899) #24	NUDT16L1 (ENSOGAG00000000215) #25	MGRN1 (ENSOGAG00000000211) #26	UBALD1 (ENSOGAG00000032547) #27	ENSOGAG00000024923	CDIP1 (ENSOGAG00000015246) #28	ENSOGAG00000015243 #29	NMRAL1 (ENSOGAG00000015241) #30	DNAJA3 (ENSOGAG00000015227) #31	VASN (ENSOGAG00000028524) #32	CORO7 (ENSOGAG00000015206) #33	PAM16 (ENSOGAG00000015204) #34	GLIS2 (ENSOGAG00000015200) #35	TFAP4 (ENSOGAG00000008955) #36
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.b #22
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b.b #22
Mouse lemur	MODERN SPECIES	8	ABAT (ENSMICG00000010637)	METTL22 (ENSMICG00000015173)	TMEM114 (ENSMICG00000041502) #7	RBFOX1 (ENSMICG00000034286) #9	ENSMICG00000016032 #11	ENSMICG00000016018 #12	C16orf89 (ENSMICG00000016010) #13	NAGPA (ENSMICG00000016002) #14	SEC14L5 (ENSMICG00000015988) #15	PPL (ENSMICG00000015966) #16	UBN1 (ENSMICG00000015950) #17	GLYR1 (ENSMICG00000015933) #18	ROGDI (ENSMICG00000015926) #19	SMIM22 (ENSMICG00000041932) #20	SEPTIN12 (ENSMICG00000015913) #21	ENSMICG00000046808 #22	ZNF500 (ENSMICG00000015905) #22	DNAAF8 (ENSMICG00000015894) #23	ANKS3 (ENSMICG00000015881) #24	NUDT16L1 (ENSMICG00000015871) #25	MGRN1 (ENSMICG00000015855) #26	UBALD1 (ENSMICG00000006782) #27	C16orf96 (ENSMICG00000046975)	CDIP1 (ENSMICG00000017825) #28	HMOX2 (ENSMICG00000017824) #29	NMRAL1 (ENSMICG00000017823) #30	DNAJA3 (ENSMICG00000017821) #31	CORO7 (ENSMICG00000017819) #33	PAM16 (ENSMICG00000042422) #34	GLIS2 (ENSMICG00000047824) #35	TFAP4 (ENSMICG00000033646) #36
Haplorrhini	ANCESTRAL SPECIES	24	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00910000147924	ENSGT00620000089279	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Simiiformes	ANCESTRAL SPECIES	19	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00910000147924	ENSGT00620000089279	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Platyrrhini	ANCESTRAL SPECIES	32	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Cebidae	ANCESTRAL SPECIES	16	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Marmoset	MODERN SPECIES	3	ENSCJAG00000078174	ENSCJAG00000076405	ENSCJAG00000072239	RBFOX1 (ENSCJAG00000017351) #9	ENSCJAG00000020005 #11	ENSCJAG00000020001 #12	C16orf89 (ENSCJAG00000019991) #13	NAGPA (ENSCJAG00000019998) #14	SEC14L5 (ENSCJAG00000019976) #15	PPL (ENSCJAG00000019959) #16	UBN1 (ENSCJAG00000019945) #17	GLYR1 (ENSCJAG00000019912) #18	ROGDI (ENSCJAG00000019901) #19	SMIM22 (ENSCJAG00000041318) #20	SEPTIN12 (ENSCJAG00000019889) #21	ZNF500 (ENSCJAG00000019885) #22	DNAAF8 (ENSCJAG00000019877) #23	ANKS3 (ENSCJAG00000019862) #24	MGRN1 (ENSCJAG00000019844) #26	UBALD1 (ENSCJAG00000040824) #27	ENSCJAG00000084611	CDIP1 (ENSCJAG00000019837) #28	HMOX2 (ENSCJAG00000019834) #29	ENSCJAG00000019832 #30	DNAJA3 (ENSCJAG00000019815) #31	VASN (ENSCJAG00000059224) #32	GLIS2 (ENSCJAG00000071028) #35	CORO7 (ENSCJAG00000019778) #33	ENSCJAG00000087064	TFAP4 (ENSCJAG00000019756) #36	ENSCJAG00000079024
Cebidae_a	ANCESTRAL SPECIES	15	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37
Capuchin	MODERN SPECIES	346			ENSCCAG00000021968	ENSCCAG00000028515	ENSCCAG00000025889 #11	ENSCCAG00000037103 #12	C16orf89 (ENSCCAG00000032170) #13	NAGPA (ENSCCAG00000026968) #14	SEC14L5 (ENSCCAG00000033870) #15	PPL (ENSCCAG00000033042) #16	UBN1 (ENSCCAG00000029151) #17	GLYR1 (ENSCCAG00000035685) #18	ROGDI (ENSCCAG00000017187) #19	SMIM22 (ENSCCAG00000036605) #20	SEPTIN12 (ENSCCAG00000021929) #21	ZNF500 (ENSCCAG00000030139) #22	DNAAF8 (ENSCCAG00000022870) #23	ANKS3 (ENSCCAG00000037262) #24	NUDT16L1 (ENSCCAG00000026367) #25	MGRN1 (ENSCCAG00000023163) #26	UBALD1 (ENSCCAG00000034958) #27	C16orf96 (ENSCCAG00000032752)	CDIP1 (ENSCCAG00000019630) #28	HMOX2 (ENSCCAG00000021853) #29	NMRAL1 (ENSCCAG00000028700) #30	DNAJA3 (ENSCCAG00000026850) #31	CORO7 (ENSCCAG00000024876) #33	GLIS2 (ENSCCAG00000034795) #35	ENSCCAG00000032698 #34
Bolivian squirrel monkey	MODERN SPECIES	71	METTL22 (ENSSBOG00000021768)	TMEM114 (ENSSBOG00000023105) #7	ENSSBOG00000034902	RBFOX1 (ENSSBOG00000033726) #9	ENSSBOG00000035466 #11	ENSSBOG00000030809 #12	C16orf89 (ENSSBOG00000029075) #13	NAGPA (ENSSBOG00000026012) #14	SEC14L5 (ENSSBOG00000005127) #15	PPL (ENSSBOG00000020202) #16	UBN1 (ENSSBOG00000030658) #17	GLYR1 (ENSSBOG00000032250) #18	ROGDI (ENSSBOG00000023780) #19	SMIM22 (ENSSBOG00000028268) #20	SEPTIN12 (ENSSBOG00000036170) #21	ZNF500 (ENSSBOG00000020730) #22	DNAAF8 (ENSSBOG00000023049) #23	ANKS3 (ENSSBOG00000020781) #24	MGRN1 (ENSSBOG00000032047) #26	UBALD1 (ENSSBOG00000028503) #27	C16orf96 (ENSSBOG00000027217)	CDIP1 (ENSSBOG00000033232) #28	HMOX2 (ENSSBOG00000020933) #29	NMRAL1 (ENSSBOG00000036276) #30	DNAJA3 (ENSSBOG00000006332) #31	CORO7 (ENSSBOG00000034721) #33	PAM16 (ENSSBOG00000031267) #34	GLIS2 (ENSSBOG00000034240) #35	TFAP4 (ENSSBOG00000029133) #36	SRL (ENSSBOG00000029273) #37	ADCY9 (ENSSBOG00000036263)
Mas night monkey	MODERN SPECIES	704	ABAT (ENSANAG00000024023)	METTL22 (ENSANAG00000035290)	TMEM114 (ENSANAG00000020660) #7	RBFOX1 (ENSANAG00000029527) #9	ENSANAG00000019340 #11	ENSANAG00000027147 #12	C16orf89 (ENSANAG00000022186) #13	NAGPA (ENSANAG00000023338) #14	SEC14L5 (ENSANAG00000032077) #15	PPL (ENSANAG00000020804) #16	UBN1 (ENSANAG00000026981) #17	GLYR1 (ENSANAG00000017504) #18	ROGDI (ENSANAG00000025774) #19	SMIM22 (ENSANAG00000028590) #20	SEPTIN12 (ENSANAG00000035914) #21	ZNF500 (ENSANAG00000034994) #22	DNAAF8 (ENSANAG00000028642) #23	ANKS3 (ENSANAG00000004672) #24	NUDT16L1 (ENSANAG00000034508) #25	MGRN1 (ENSANAG00000037387) #26
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00910000147924	ENSGT00620000089279	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00860000136287	ENSGT00390000008647.e.b #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00910000147485	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00910000147924	ENSGT00620000089279	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00910000147485	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00940000158383 #35
Rhinopithecus	ANCESTRAL SPECIES	39	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00860000136287	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00910000147485	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Black snub-nosed monkey	MODERN SPECIES	815	ITM2C (ENSRBIG00000042299)	CAB39 (ENSRBIG00000032248)	ENSRBIG00000035059	ENSRBIG00000035984 #11	ENSRBIG00000037457 #12	ENSRBIG00000044676	C16orf89 (ENSRBIG00000044679) #13	NAGPA (ENSRBIG00000031641) #14	SEC14L5 (ENSRBIG00000028879) #15	PPL (ENSRBIG00000004990) #16	UBN1 (ENSRBIG00000034935) #17	GLYR1 (ENSRBIG00000043491) #18	ROGDI (ENSRBIG00000041691) #19	SMIM22 (ENSRBIG00000027695) #20	SEPTIN12 (ENSRBIG00000024546) #21	ZNF500 (ENSRBIG00000032822) #22	DNAAF8 (ENSRBIG00000035740) #23	ANKS3 (ENSRBIG00000029556) #24	NUDT16L1 (ENSRBIG00000040360) #25	MGRN1 (ENSRBIG00000038484) #26	UBALD1 (ENSRBIG00000028334) #27	ENSRBIG00000040062	C16orf96 (ENSRBIG00000026876)	CDIP1 (ENSRBIG00000043104) #28	HMOX2 (ENSRBIG00000029255) #29	NMRAL1 (ENSRBIG00000028967) #30	DNAJA3 (ENSRBIG00000034980) #31	CORO7 (ENSRBIG00000037799) #33	GLIS2 (ENSRBIG00000027950) #35	TFAP4 (ENSRBIG00000025596) #36	SRL (ENSRBIG00000042358) #37
Golden snub-nosed monkey	MODERN SPECIES	2893			RBFOX1 (ENSRROG00000044411) #9	ENSRROG00000039663 #11	ENSRROG00000039352 #12	ENSRROG00000033785	C16orf89 (ENSRROG00000031936) #13	NAGPA (ENSRROG00000030241) #14	SEC14L5 (ENSRROG00000044666) #15	PPL (ENSRROG00000030809) #16	UBN1 (ENSRROG00000031100) #17	GLYR1 (ENSRROG00000028865) #18	ROGDI (ENSRROG00000038517) #19	SMIM22 (ENSRROG00000029207) #20	SEPTIN12 (ENSRROG00000028781) #21	ZNF500 (ENSRROG00000030197) #22	DNAAF8 (ENSRROG00000039572) #23	ANKS3 (ENSRROG00000035421) #24	NUDT16L1 (ENSRROG00000041691) #25	MGRN1 (ENSRROG00000042732) #26	UBALD1 (ENSRROG00000036721) #27	ENSRROG00000029704	C16orf96 (ENSRROG00000036277)	CDIP1 (ENSRROG00000036050) #28	HMOX2 (ENSRROG00000001998) #29	NMRAL1 (ENSRROG00000044653) #30	DNAJA3 (ENSRROG00000035731) #31	CORO7 (ENSRROG00000043383) #33	VASN (ENSRROG00000001008) #32	GLIS2 (ENSRROG00000036093) #35	TFAP4 (ENSRROG00000028691) #36
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00910000147924	ENSGT00620000089279	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Vervet Monkey	MODERN SPECIES	24	METTL22 (ENSCSAG00000008716)	TMEM114 (ENSCSAG00000008725) #7	RBFOX1 (ENSCSAG00000008739) #9	ENSCSAG00000018849	ENSCSAG00000008764 #11	ENSCSAG00000008781 #12	C16orf89 (ENSCSAG00000008791) #13	NAGPA (ENSCSAG00000008808) #14	SEC14L5 (ENSCSAG00000008884) #15	PPL (ENSCSAG00000008910) #16	UBN1 (ENSCSAG00000008926) #17	GLYR1 (ENSCSAG00000008939) #18	ROGDI (ENSCSAG00000008951) #19	SMIM22 (ENSCSAG00000008959) #20	SEPTIN12 (ENSCSAG00000008975) #21	ZNF500 (ENSCSAG00000008993) #22	DNAAF8 (ENSCSAG00000009012) #23	ANKS3 (ENSCSAG00000009043) #24	NUDT16L1 (ENSCSAG00000009022) #25	MGRN1 (ENSCSAG00000009073) #26	UBALD1 (ENSCSAG00000009108) #27	ENSCSAG00000009124	CDIP1 (ENSCSAG00000009136) #28	NMRAL1 (ENSCSAG00000009171) #30	DNAJA3 (ENSCSAG00000009256) #31	CORO7 (ENSCSAG00000009532) #33	GLIS2 (ENSCSAG00000009593) #35	TFAP4 (ENSCSAG00000009620) #36	ENSCSAG00000009635 #37	ADCY9 (ENSCSAG00000009642)	CREBBP (ENSCSAG00000009832)
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Macaca	ANCESTRAL SPECIES	8	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00910000147924	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000160685 #9	ENSGT00940000164709.a.b.b.b.b.b.a	ENSGT01100000263539.b.a.a.a.b.a.a.a.b	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00390000008647.e.b #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00770000120884 #20	ENSGT00390000007164 #19	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT01100000263493.a.b.a.a.b.b.b.b.a.a.a.b	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000163244.d.b.a.a.b.c.b.b	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00940000158383 #35
Crab-eating macaque	MODERN SPECIES	12	ENSMFAG00000065419	ENSMFAG00000024716	ENSMFAG00000064195	RBFOX1 (ENSMFAG00000036447) #9	ENSMFAG00000063044	ENSMFAG00000044561 #11	ENSMFAG00000032954 #12	C16orf89 (ENSMFAG00000032488) #13	NAGPA (ENSMFAG00000021013) #14	SEC14L5 (ENSMFAG00000002127) #15	UBN1 (ENSMFAG00000036657) #17	GLYR1 (ENSMFAG00000032460) #18	SMIM22 (ENSMFAG00000036739) #20	SEPTIN12 (ENSMFAG00000043961) #21	ROGDI (ENSMFAG00000003647) #19	ZNF500 (ENSMFAG00000032711) #22	ENSMFAG00000061637	DNAAF8 (ENSMFAG00000000387) #23	ANKS3 (ENSMFAG00000033670) #24	NUDT16L1 (ENSMFAG00000037944) #25	MGRN1 (ENSMFAG00000031206) #26	UBALD1 (ENSMFAG00000043893) #27	ENSMFAG00000054999	C16orf96 (ENSMFAG00000035504)	CDIP1 (ENSMFAG00000030551) #28	ENSMFAG00000052773	HMOX2 (ENSMFAG00000030777) #29	NMRAL1 (ENSMFAG00000030193) #30	DNAJA3 (ENSMFAG00000042573) #31	CORO7 (ENSMFAG00000031015) #33	GLIS2 (ENSMFAG00000041657) #35
Rhesus	MODERN SPECIES	12	ENSMMUG00000056532	ENSMMUG00000050089	RBFOX1 (ENSMMUG00000003458) #9	ENSMMUG00000052596	EEF2KMT (ENSMMUG00000029240) #11	ALG1 (ENSMMUG00000007494) #12	C20H16orf89 (ENSMMUG00000017225) #13	NAGPA (ENSMMUG00000011499) #14	SEC14L5 (ENSMMUG00000018047) #15	PPL (ENSMMUG00000017822) #16	UBN1 (ENSMMUG00000009569) #17	GLYR1 (ENSMMUG00000009567) #18	SMIM22 (ENSMMUG00000059174) #20	ROGDI (ENSMMUG00000017946) #19	SEPTIN12 (ENSMMUG00000017945) #21	ZNF500 (ENSMMUG00000014313) #22	ENSMMUG00000049336	DNAAF8 (ENSMMUG00000014311) #23	ANKS3 (ENSMMUG00000011001) #24	MGRN1 (ENSMMUG00000001888) #26	UBALD1 (ENSMMUG00000029250) #27	ENSMMUG00000054080	C20H16orf96 (ENSMMUG00000018631)	CDIP1 (ENSMMUG00000009898) #28	HMOX2 (ENSMMUG00000009901) #29	NMRAL1 (ENSMMUG00000020540) #30	DNAJA3 (ENSMMUG00000008134) #31	VASN (ENSMMUG00000044344) #32	CORO7 (ENSMMUG00000006499) #33	GLIS2 (ENSMMUG00000015758) #35	TFAP4 (ENSMMUG00000044729) #36
Pig-tailed macaque	MODERN SPECIES	400	TMEM114 (ENSMNEG00000043136) #7	ENSMNEG00000040811	RBFOX1 (ENSMNEG00000032034) #9	ENSMNEG00000039823	ENSMNEG00000033815 #11	ENSMNEG00000042312 #12	C16orf89 (ENSMNEG00000034278) #13	NAGPA (ENSMNEG00000008391) #14	SEC14L5 (ENSMNEG00000029075) #15	PPL (ENSMNEG00000029273) #16	UBN1 (ENSMNEG00000029350) #17	GLYR1 (ENSMNEG00000045310) #18	ROGDI (ENSMNEG00000038073) #19	SMIM22 (ENSMNEG00000035774) #20	SEPTIN12 (ENSMNEG00000028232) #21	ZNF500 (ENSMNEG00000033641) #22	DNAAF8 (ENSMNEG00000038425) #23	ANKS3 (ENSMNEG00000039392) #24	NUDT16L1 (ENSMNEG00000028590) #25	MGRN1 (ENSMNEG00000030141) #26	UBALD1 (ENSMNEG00000034611) #27	C16orf96 (ENSMNEG00000031961)	CDIP1 (ENSMNEG00000044543) #28	HMOX2 (ENSMNEG00000028168) #29	NMRAL1 (ENSMNEG00000038581) #30	DNAJA3 (ENSMNEG00000033477) #31	CORO7 (ENSMNEG00000043447) #33	VASN (ENSMNEG00000021483) #32	GLIS2 (ENSMNEG00000030346) #35	TFAP4 (ENSMNEG00000030602) #36	ENSMNEG00000019236 #37
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Olive baboon	MODERN SPECIES	9	ENSPANG00000043594	GRIN2A (ENSPANG00000024082)	ENSPANG00000048109	RBFOX1 (ENSPANG00000026500) #9	ENSPANG00000019367 #11	ENSPANG00000016271 #12	C16orf89 (ENSPANG00000023483) #13	NAGPA (ENSPANG00000019368) #14	SEC14L5 (ENSPANG00000012330) #15	PPL (ENSPANG00000007407) #16	UBN1 (ENSPANG00000022433) #17	GLYR1 (ENSPANG00000012331) #18	ROGDI (ENSPANG00000010497) #19	SMIM22 (ENSPANG00000009928) #20	SEPTIN12 (ENSPANG00000022807) #21	ZNF500 (ENSPANG00000017589) #22	DNAAF8 (ENSPANG00000010335) #23	ANKS3 (ENSPANG00000008442) #24	NUDT16L1 (ENSPANG00000018555) #25	MGRN1 (ENSPANG00000010765) #26	UBALD1 (ENSPANG00000019373) #27	C16orf96 (ENSPANG00000019371)	CDIP1 (ENSPANG00000019370) #28	HMOX2 (ENSPANG00000019954) #29	NMRAL1 (ENSPANG00000029761) #30	DNAJA3 (ENSPANG00000005135) #31	CORO7 (ENSPANG00000010766) #33	VASN (ENSPANG00000009507) #32	PAM16 (ENSPANG00000044465) #34	GLIS2 (ENSPANG00000026004) #35	ENSPANG00000048833
Cercopithecinae_d	ANCESTRAL SPECIES	20	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT01000000220329	ENSGT00510000047003 #11	ENSGT00390000008647.e.a #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Sooty mangabey	MODERN SPECIES	375	METTL22 (ENSCATG00000031349)	TMEM114 (ENSCATG00000002490) #7	ENSCATG00000026025	RBFOX1 (ENSCATG00000033816) #9	ENSCATG00000043379 #11	ENSCATG00000033796 #12	C16orf89 (ENSCATG00000031583) #13	NAGPA (ENSCATG00000029115) #14	SEC14L5 (ENSCATG00000029712) #15	PPL (ENSCATG00000042028) #16	UBN1 (ENSCATG00000041435) #17	GLYR1 (ENSCATG00000017489) #18	SMIM22 (ENSCATG00000033043) #20	ROGDI (ENSCATG00000042786) #19	SEPTIN12 (ENSCATG00000033120) #21	ZNF500 (ENSCATG00000018552) #22	DNAAF8 (ENSCATG00000012962) #23	ANKS3 (ENSCATG00000039911) #24	NUDT16L1 (ENSCATG00000002619) #25	MGRN1 (ENSCATG00000039612) #26	UBALD1 (ENSCATG00000033012) #27	C16orf96 (ENSCATG00000038368)	CDIP1 (ENSCATG00000038274) #28	HMOX2 (ENSCATG00000037278) #29	NMRAL1 (ENSCATG00000043785) #30	DNAJA3 (ENSCATG00000037365) #31	VASN (ENSCATG00000004267) #32	CORO7 (ENSCATG00000034606) #33	GLIS2 (ENSCATG00000042661) #35	TFAP4 (ENSCATG00000035349) #36	ENSCATG00000032227 #37
Drill	DUPLICATION
Drill	MODERN SPECIES	736		ENSMLEG00000043636	ENSMLEG00000036002	ENSMLEG00000027676	ENSMLEG00000035772 #11	ALG1L2 (ENSMLEG00000043910) #12	C16orf89 (ENSMLEG00000033913) #13	NAGPA (ENSMLEG00000040742) #14	SEC14L5 (ENSMLEG00000043969) #15	PPL (ENSMLEG00000033409) #16	UBN1 (ENSMLEG00000032250) #17	GLYR1 (ENSMLEG00000038611) #18	ROGDI (ENSMLEG00000030842) #19	SMIM22 (ENSMLEG00000028166) #20	SEPTIN12 (ENSMLEG00000019167) #21	ZNF500 (ENSMLEG00000042360) #22	DNAAF8 (ENSMLEG00000028323) #23	ANKS3 (ENSMLEG00000037358) #24	NUDT16L1 (ENSMLEG00000030930) #25	MGRN1 (ENSMLEG00000036672) #26	UBALD1 (ENSMLEG00000035172) #27	ENSMLEG00000039651	C16orf96 (ENSMLEG00000042756)	CDIP1 (ENSMLEG00000032374) #28	HMOX2 (ENSMLEG00000011640) #29	ENSMLEG00000032367	NMRAL1 (ENSMLEG00000035205) #30	DNAJA3 (ENSMLEG00000035832) #31	CORO7 (ENSMLEG00000044135) #33	VASN (ENSMLEG00000019032) #32	PAM16 (ENSMLEG00000032307) #34
Drill	MODERN SPECIES	930													ZDHHC4 (ENSMLEG00000014952)	ENSMLEG00000042420	INTS15 (ENSMLEG00000030493)	ENSMLEG00000037708 #22	ZNF12 (ENSMLEG00000033128)	ENSMLEG00000039444	ENSMLEG00000030927	ENSMLEG00000030378	ENSMLEG00000037262	LMTK2 (ENSMLEG00000033242)	BHLHA15 (ENSMLEG00000005175)	TECPR1 (ENSMLEG00000033546)	BRI3 (ENSMLEG00000038264)	BAIAP2L1 (ENSMLEG00000030011)	NPTX2 (ENSMLEG00000034636)	TMEM130 (ENSMLEG00000024016)	TRRAP (ENSMLEG00000020926)	SMURF1 (ENSMLEG00000041278)	KPNA7 (ENSMLEG00000041680)
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003.i.a #11	ENSGT00390000008647.e.b #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00910000148465	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00910000147485	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00910000147525	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34
Gibbon	MODERN SPECIES	8	ENSNLEG00000010025 #7	ENSNLEG00000010017 #9	ENSNLEG00000032011	ENSNLEG00000034454	ENSNLEG00000010012 #12	ENSNLEG00000010001 #13	NAGPA (ENSNLEG00000009994) #14	SEC14L5 (ENSNLEG00000009992) #15	PPL (ENSNLEG00000009985) #16	UBN1 (ENSNLEG00000009968) #17	GLYR1 (ENSNLEG00000009950) #18	ENSNLEG00000009949	ROGDI (ENSNLEG00000009926) #19	ENSNLEG00000030827 #20	SEPTIN12 (ENSNLEG00000009906) #21	ZNF500 (ENSNLEG00000009900) #22	DNAAF8 (ENSNLEG00000009892) #23	ANKS3 (ENSNLEG00000009880) #24	MGRN1 (ENSNLEG00000009875) #26	ENSNLEG00000031729	C16orf96 (ENSNLEG00000009869)	ENSNLEG00000035968	ENSNLEG00000029380	HMOX2 (ENSNLEG00000009857) #29	ENSNLEG00000033996	NMRAL1 (ENSNLEG00000009852) #30	DNAJA3 (ENSNLEG00000009811) #31	CORO7 (ENSNLEG00000009847) #33	ENSNLEG00000035648 #32	PAM16 (ENSNLEG00000009842) #34	GLIS2 (ENSNLEG00000009834) #35
Hominidae	ANCESTRAL SPECIES	9	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003.i.a #11	ENSGT00390000008647.e.b #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00910000148465	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00910000147485	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35
Orangutan	MODERN SPECIES	7	TMEM186 (ENSPPYG00000038457)	ABAT (ENSPPYG00000007082)	ENSPPYG00000040478	METTL22 (ENSPPYG00000007081)	TMEM114 (ENSPPYG00000033269) #7	RBFOX1 (ENSPPYG00000007079) #9	ENSPPYG00000014471	NAGPA (ENSPPYG00000007075) #14	SEC14L5 (ENSPPYG00000007074) #15	PPL (ENSPPYG00000007073) #16	UBN1 (ENSPPYG00000030031) #17	GLYR1 (ENSPPYG00000007072) #18	ROGDI (ENSPPYG00000007071) #19	ENSPPYG00000034121 #20	SEPTIN12 (ENSPPYG00000007070) #21	ZNF500 (ENSPPYG00000007069) #22	DNAAF8 (ENSPPYG00000007068) #23	ANKS3 (ENSPPYG00000007067) #24	NUDT16L1 (ENSPPYG00000007066) #25	MGRN1 (ENSPPYG00000007065) #26	UBALD1 (ENSPPYG00000030515) #27	ENSPPYG00000041503	C16orf96 (ENSPPYG00000007063)	CDIP1 (ENSPPYG00000007062) #28	HMOX2 (ENSPPYG00000007061) #29	ENSPPYG00000007060 #30	DNAJA3 (ENSPPYG00000007058) #31	VASN (ENSPPYG00000007057) #32	GLIS2 (ENSPPYG00000007055) #35	CORO7 (ENSPPYG00000007056) #33	TFAP4 (ENSPPYG00000007054) #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	24	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003.i.a.a.b #11	ENSGT00390000008647.e.b #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00910000148465	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00910000147485	ENSGT00390000008825.a #27	ENSGT01010000222898	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34
Homo/Pan group	ANCESTRAL SPECIES	23	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003.i.a.a.b #11	ENSGT00390000008647.e.b #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00910000147485	ENSGT00390000008825.a #27	ENSGT01010000222898	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34
Pan	ANCESTRAL SPECIES	28	ENSGT00550000074885	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003.i.a.b.b.b #11	ENSGT00390000008647.e.b #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00910000147485	ENSGT00390000008825.a #27	ENSGT01010000222898	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00940000158383 #35
Bonobo	MODERN SPECIES	7	TMEM114 (ENSPPAG00000032203) #7	ENSPPAG00000036238 #9	ENSPPAG00000011219	ENSPPAG00000007163	ENSPPAG00000037714 #11	ALG1 (ENSPPAG00000033585) #12	ENSPPAG00000032508 #13	NAGPA (ENSPPAG00000038523) #14	SEC14L5 (ENSPPAG00000036637) #15	PPL (ENSPPAG00000030861) #16	UBN1 (ENSPPAG00000029315) #17	GLYR1 (ENSPPAG00000036027) #18	ROGDI (ENSPPAG00000033667) #19	ENSPPAG00000023720 #20	SEPTIN12 (ENSPPAG00000033910) #21	ZNF500 (ENSPPAG00000035096) #22	DNAAF8 (ENSPPAG00000039940) #23	ANKS3 (ENSPPAG00000039039) #24	ENSPPAG00000041768 #25	MGRN1 (ENSPPAG00000043826) #26	ENSPPAG00000035542	ENSPPAG00000032792 #27	ENSPPAG00000037833	C16orf96 (ENSPPAG00000037811)	CDIP1 (ENSPPAG00000042655) #28	HMOX2 (ENSPPAG00000028361) #29	ENSPPAG00000028682 #30	DNAJA3 (ENSPPAG00000005143) #31	VASN (ENSPPAG00000003672) #32	GLIS2 (ENSPPAG00000027590) #35	CORO7 (ENSPPAG00000036983) #33
Chimpanzee	MODERN SPECIES	7	METTL22 (ENSPTRG00000007745)	TMEM114 (ENSPTRG00000042208) #7	RBFOX1 (ENSPTRG00000007744) #9	ENSPTRG00000050980	EEF2KMT (ENSPTRG00000048745) #11	ALG1 (ENSPTRG00000007737) #12	C16H16orf89 (ENSPTRG00000007736) #13	NAGPA (ENSPTRG00000007735) #14	SEC14L5 (ENSPTRG00000007733) #15	PPL (ENSPTRG00000007732) #16	UBN1 (ENSPTRG00000007731) #17	GLYR1 (ENSPTRG00000007730) #18	ROGDI (ENSPTRG00000007729) #19	SMIM22 (ENSPTRG00000042971) #20	SEPTIN12 (ENSPTRG00000007728) #21	ZNF500 (ENSPTRG00000051798) #22	DNAAF8 (ENSPTRG00000007726) #23	ANKS3 (ENSPTRG00000007725) #24	NUDT16L1 (ENSPTRG00000007724) #25	MGRN1 (ENSPTRG00000007723) #26	ENSPTRG00000043933	UBALD1 (ENSPTRG00000007722) #27	C16H16orf96 (ENSPTRG00000031302)	CDIP1 (ENSPTRG00000023084) #28	HMOX2 (ENSPTRG00000007720) #29	NMRAL1 (ENSPTRG00000007719) #30	DNAJA3 (ENSPTRG00000007718) #31	VASN (ENSPTRG00000031304) #32	GLIS2 (ENSPTRG00000007714) #35	CORO7 (ENSPTRG00000007716) #33	TFAP4 (ENSPTRG00000007713) #36
Human	MODERN SPECIES	7	ABAT (ENSG00000183044)	METTL22 (ENSG00000067365)	TMEM114 (ENSG00000232258) #7	RBFOX1 (ENSG00000078328) #9	EEF2KMT (ENSG00000118894) #11	C16orf89 (ENSG00000153446) #13	ALG1 (ENSG00000033011) #12	NAGPA (ENSG00000103174) #14	SEC14L5 (ENSG00000103184) #15	PPL (ENSG00000118898) #16	UBN1 (ENSG00000118900) #17	GLYR1 (ENSG00000140632) #18	ROGDI (ENSG00000067836) #19	SMIM22 (ENSG00000267795) #20	SEPTIN12 (ENSG00000140623) #21	ZNF500 (ENSG00000103199) #22	DNAAF8 (ENSG00000166246) #23	ANKS3 (ENSG00000168096) #24	NUDT16L1 (ENSG00000168101) #25	MGRN1 (ENSG00000102858) #26	UBALD1 (ENSG00000153443) #27	C16orf96 (ENSG00000205832)	CDIP1 (ENSG00000089486) #28	HMOX2 (ENSG00000103415) #29	NMRAL1 (ENSG00000153406) #30	DNAJA3 (ENSG00000103423) #31	VASN (ENSG00000168140) #32	CORO7 (ENSG00000262246) #33	CORO7-PAM16 (ENSG00000103426)	PAM16 (ENSG00000217930) #34	GLIS2 (ENSG00000126603) #35
Gorilla	MODERN SPECIES	350																ENSGGOG00000043573 #22
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	2227																ENSTSYG00000006080 #22	UBE2M (ENSTSYG00000010683)	CHMP2A (ENSTSYG00000010665)	TRIM28 (ENSTSYG00000026293)
Tarsier	MODERN SPECIES	4368										PPL (ENSTSYG00000033264) #16	UBN1 (ENSTSYG00000002899) #17	GLYR1 (ENSTSYG00000002875) #18	ROGDI (ENSTSYG00000028153) #19	SMIM22 (ENSTSYG00000033466) #20	SEPTIN12 (ENSTSYG00000008537) #21	ZNF500 (ENSTSYG00000007942) #22	DNAAF8 (ENSTSYG00000028948) #23	ANKS3 (ENSTSYG00000003449) #24	NUDT16L1 (ENSTSYG00000029567) #25	MGRN1 (ENSTSYG00000032776) #26	UBALD1 (ENSTSYG00000004571) #27	C16orf96 (ENSTSYG00000028806)	CDIP1 (ENSTSYG00000028654) #28	HMOX2 (ENSTSYG00000034186) #29	NMRAL1 (ENSTSYG00000006683) #30	DNAJA3 (ENSTSYG00000007840) #31
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00940000180007	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Tree shrew	MODERN SPECIES	6124									ENSTBEG00000001465 #13	ENSTBEG00000001117 #14	SEC14L5 (ENSTBEG00000000602) #15	PPL (ENSTBEG00000000340) #16	UBN1 (ENSTBEG00000007820) #17	GLYR1 (ENSTBEG00000007592) #18	SEPTIN12 (ENSTBEG00000007426) #21	ENSTBEG00000007373 #22
Glires	ANCESTRAL SPECIES	11	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00940000180007	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Rodentia	ANCESTRAL SPECIES	25																ENSGT00940000154740.a.b.b #22	ENSGT00940000163935	ENSGT01100000263552.g.b.b	ENSGT00940000162814	ENSGT00950000182832.A	ENSGT00940000160527	ENSGT00940000160859	ENSGT00940000157947	ENSGT00940000162092	ENSGT00940000164133	ENSGT00940000163047	ENSGT00940000163291	ENSGT00940000163974	ENSGT00390000010806	ENSGT01100000263562.b.a.a.c.a	ENSGT00940000163014
Rodentia_A	ANCESTRAL SPECIES	28																ENSGT00940000154740.a.b.b #22	ENSGT00940000163935	ENSGT01100000263552.g.b.b	ENSGT00940000162814	ENSGT00950000182832.A	ENSGT00940000160527	ENSGT00940000160859	ENSGT00940000157947	ENSGT00940000162092	ENSGT00940000163047	ENSGT00940000163291	ENSGT00940000163974	ENSGT00390000010806	ENSGT01100000263562.b.a.a.c.a	ENSGT00940000162352	ENSGT00980000199879
Sciuridae	ANCESTRAL SPECIES	39																ENSGT00940000154740.a.b.b #22	ENSGT00940000163935	ENSGT00940000162814	ENSGT00950000182832.A	ENSGT00940000160527	ENSGT00940000160859	ENSGT00940000157947	ENSGT00940000162092.c	ENSGT00940000162092.d	ENSGT00940000163047	ENSGT00940000163291	ENSGT00940000163974	ENSGT00390000010806.f	ENSGT01100000263562.b.a.a.c.a	ENSGT00940000162352	ENSGT00980000199879
Marmotini	ANCESTRAL SPECIES	48																ENSGT00940000154740.a.b.b #22	ENSGT00940000163935	ENSGT00940000162814	ENSGT00950000182832.A	ENSGT00940000160527	ENSGT00940000160859	ENSGT00940000157947	ENSGT00940000162092.c	ENSGT00940000162092.d	ENSGT00940000163047	ENSGT00390000010806.f	ENSGT01100000263562.b.a.a.c.a	ENSGT00940000162352	ENSGT00940000162111	ENSGT00940000162872	ENSGT00940000163034
Alpin marmot	MODERN SPECIES	104																ENSMMMG00000024704 #22	ENSMMMG00000024705	CHMP2A (ENSMMMG00000024706)	TRIM28 (ENSMMMG00000024707)	ZBTB45 (ENSMMMG00000024708)	SLC27A5 (ENSMMMG00000024709)	ENSMMMG00000024710	RPS5 (ENSMMMG00000024711)	ENSMMMG00000024712	ZNF8 (ENSMMMG00000024713)	ENSMMMG00000024714	ZNF329 (ENSMMMG00000024715)	ZSCAN18 (ENSMMMG00000024716)	ZNF606 (ENSMMMG00000024717)	ENSMMMG00000024718	ENSMMMG00000024720
Rodentia_B	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Myomorpha	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Muroidea	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Muroidea_A	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Cricetidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Cricetinae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Golden Hamster	MODERN SPECIES	854									ENSMAUG00000000964	Bsph2 (ENSMAUG00000018242)	Bsph1 (ENSMAUG00000000945)	Cabp5 (ENSMAUG00000000389)	Pla2g4c (ENSMAUG00000017093)	Lig1 (ENSMAUG00000012577)	Zswim9 (ENSMAUG00000012192)	ENSMAUG00000013431 #22	Zbtb45 (ENSMAUG00000012496)	Slc27a5 (ENSMAUG00000011174)	Zfp446 (ENSMAUG00000010544)	Zfp324 (ENSMAUG00000012071)	Rnf225 (ENSMAUG00000011183)	Rps5 (ENSMAUG00000010731)	Zscan22 (ENSMAUG00000009841)	Zfp128 (ENSMAUG00000009738)	ENSMAUG00000008927	Zfp329 (ENSMAUG00000008851)	Zscan18 (ENSMAUG00000009174)
Murinae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Mus	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Mus_A	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Mus_B	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Mus_C	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.b #22
Steppe mouse	MODERN SPECIES	1611															Vmn1r85 (ENSMSIG00000000557)	ENSMSIG00000000485 #22	ENSMSIG00000000443	Chmp2a (ENSMSIG00000000327)	Trim28 (ENSMSIG00000000233)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1811																ENSNGAG00000024274 #22	Ube2m (ENSNGAG00000023391)	Chmp2a (ENSNGAG00000011057)	Zbtb45 (ENSNGAG00000005780)	Slc27a5 (ENSNGAG00000006680)	Zfp446 (ENSNGAG00000023891)	Trim28 (ENSNGAG00000014844)	ENSNGAG00000016304	Rnf225 (ENSNGAG00000010105)	Rps5 (ENSNGAG00000015766)	Zscan22 (ENSNGAG00000017861)	Zfp128 (ENSNGAG00000021534)	ENSNGAG00000023445	Zfp329 (ENSNGAG00000012452)	Zscan18 (ENSNGAG00000019779)	ENSNGAG00000023608
Kangaroo rat	MODERN SPECIES	387	ENSDORG00000028983	Rsph10b (ENSDORG00000027674)	ENSDORG00000026010	Aimp2 (ENSDORG00000029049)	Ankrd61 (ENSDORG00000016272)	Eif2ak1 (ENSDORG00000016271)	ENSDORG00000025319	Cyth3 (ENSDORG00000024524)	ENSDORG00000028442	Rac1 (ENSDORG00000014388)	Daglb (ENSDORG00000002646)	Kdelr2 (ENSDORG00000012464)	Grid2ip (ENSDORG00000001187)	Zdhhc4 (ENSDORG00000025226)	Ints15 (ENSDORG00000015054)	ENSDORG00000023712 #22	Zfp316 (ENSDORG00000023753)	Zfp12 (ENSDORG00000005742)	ENSDORG00000025580	Rbak (ENSDORG00000023872)	Rnf216 (ENSDORG00000010835)	Fscn1 (ENSDORG00000025729)	Actb (ENSDORG00000010079)	Fbxl18 (ENSDORG00000010081)	Tnrc18 (ENSDORG00000029645)	Slc29a4 (ENSDORG00000003898)	Wipi2 (ENSDORG00000012212)	Mmd2 (ENSDORG00000011018)	Papolb (ENSDORG00000001140)	Radil (ENSDORG00000011014)	Ap5z1 (ENSDORG00000011010)
Lagomorpha	ANCESTRAL SPECIES	66					ENSGT00510000047003 #11	ENSGT00390000008647 #12	ENSGT00390000013433 #13	ENSGT01030000234566.e.a #14	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00940000160872 #30	ENSGT00940000155280 #31	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36
Pika	MODERN SPECIES	2652							ENSOPRG00000000740 #11	ENSOPRG00000000731 #12	C16orf89 (ENSOPRG00000000726) #13	NAGPA (ENSOPRG00000000707) #14	SEC14L5 (ENSOPRG00000000694) #15	PPL (ENSOPRG00000000678) #16	UBN1 (ENSOPRG00000000662) #17	GLYR1 (ENSOPRG00000000645) #18	SEPTIN12 (ENSOPRG00000000640) #21	ZNF500 (ENSOPRG00000000631) #22	DNAAF8 (ENSOPRG00000000624) #23	ANKS3 (ENSOPRG00000000607) #24	NUDT16L1 (ENSOPRG00000000593) #25	MGRN1 (ENSOPRG00000000576) #26	UBALD1 (ENSOPRG00000000572) #27	ENSOPRG00000000565	CDIP1 (ENSOPRG00000000550) #28	HMOX2 (ENSOPRG00000000546) #29	NMRAL1 (ENSOPRG00000000539) #30	DNAJA3 (ENSOPRG00000000514) #31	CORO7 (ENSOPRG00000000495) #33	GLIS2 (ENSOPRG00000000484) #35	ENSOPRG00000000477 #37	ADCY9 (ENSOPRG00000000466)
Rabbit	MODERN SPECIES	520										PPL (ENSOCUG00000011525) #16	UBN1 (ENSOCUG00000010494) #17	ENSOCUG00000010486 #18	ROGDI (ENSOCUG00000021052) #19	SMIM22 (ENSOCUG00000033517) #20	SEPTIN12 (ENSOCUG00000008343) #21	ENSOCUG00000002223 #22	DNAAF8 (ENSOCUG00000027662) #23	ANKS3 (ENSOCUG00000009493) #24	MGRN1 (ENSOCUG00000005769) #26	UBALD1 (ENSOCUG00000025984) #27	ENSOCUG00000023879	CDIP1 (ENSOCUG00000022734) #28	HMOX2 (ENSOCUG00000006018) #29	ENSOCUG00000006767	ENSOCUG00000006763 #30	ENSOCUG00000004416 #31	VASN (ENSOCUG00000023319) #32	CORO7 (ENSOCUG00000000193) #33	PAM16 (ENSOCUG00000032918) #34	GLIS2 (ENSOCUG00000012971) #35	TFAP4 (ENSOCUG00000024550) #36
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT01030000234566.e.a #14	ENSGT00390000013433.a #13	ENSGT00390000008647 #12	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00390000014423	ENSGT00390000015360	ENSGT00940000163566.b	ENSGT00940000157752	ENSGT00940000160812	ENSGT00390000012857	ENSGT00390000009759
Opossum	MODERN SPECIES	5	RBFOX1 (ENSMODG00000005826) #9	ENSMODG00000005839 #10	ENSMODG00000005853 #11	ENSMODG00000005862	NAGPA (ENSMODG00000005871) #14	C16orf89 (ENSMODG00000005894) #13	ENSMODG00000005925 #12	SEC14L5 (ENSMODG00000005977) #15	PPL (ENSMODG00000006040) #16	UBN1 (ENSMODG00000006072) #17	GLYR1 (ENSMODG00000006140) #18	ROGDI (ENSMODG00000006182) #19	SMIM22 (ENSMODG00000050809) #20	SEPTIN12 (ENSMODG00000006197) #21	ENSMODG00000006211	ZNF500 (ENSMODG00000042972) #22	ENSMODG00000027856 #23	ANKS3 (ENSMODG00000006338) #24	NUDT16L1 (ENSMODG00000050850) #25	MGRN1 (ENSMODG00000006596) #26	UBALD1 (ENSMODG00000049280) #27	ENSMODG00000029035	CDIP1 (ENSMODG00000006618) #28	HMOX2 (ENSMODG00000006633) #29	ENSMODG00000006654	DCTN5 (ENSMODG00000006663)	PLK1 (ENSMODG00000006693)	ERN2 (ENSMODG00000006717)	UBFD1 (ENSMODG00000006727)	EARS2 (ENSMODG00000006745)	GGA2 (ENSMODG00000006754)
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00510000048539	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT01030000234566.e.a #14	ENSGT00390000013433.a #13	ENSGT00390000008647 #12	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00390000014423	ENSGT00390000015360	ENSGT00940000163566.b	ENSGT00940000157752	ENSGT00940000160812	ENSGT00390000012857	ENSGT00390000009759
Tasmanian devil	MODERN SPECIES		METTL22 (ENSSHAG00000000726)	TMEM114 (ENSSHAG00000029463) #7	RBFOX1 (ENSSHAG00000031610) #9	ENSSHAG00000028243	ENSSHAG00000012660 #10	ENSSHAG00000012935 #11	ENSSHAG00000002944 #14	ENSSHAG00000013015 #12	ENSSHAG00000001002 #13	ENSSHAG00000023734 #15	PPL (ENSSHAG00000005158) #16	UBN1 (ENSSHAG00000005893) #17	GLYR1 (ENSSHAG00000006361) #18	SMIM22 (ENSSHAG00000024014) #20	SEPTIN12 (ENSSHAG00000007036) #21	ZNF500 (ENSSHAG00000007447) #22	ENSSHAG00000007628 #23	ANKS3 (ENSSHAG00000007924) #24	NUDT16L1 (ENSSHAG00000024919) #25	MGRN1 (ENSSHAG00000008445) #26	UBALD1 (ENSSHAG00000020838) #27	ENSSHAG00000030747	CDIP1 (ENSSHAG00000023192) #28	ENSSHAG00000002517 #29	ENSSHAG00000003810	ENSSHAG00000025282	ENSSHAG00000003604	ENSSHAG00000026691	PLK1 (ENSSHAG00000020975)	ENSSHAG00000005538	ENSSHAG00000006106
Diprotodontia	ANCESTRAL SPECIES	205																ENSGT00940000154740.a.b.b #22	ENSGT01100000263491.a.b.a.a.a.a.a.b.d
Wallaby	MODERN SPECIES	1257																ENSMEUG00000015316 #22
Diprotodontia_a	ANCESTRAL SPECIES	17	ENSGT00390000011615.B #7	ENSGT00940000160685 #9	ENSGT00940000163876 #10	ENSGT00510000047003 #11	ENSGT01030000234566.e.a #14	ENSGT00390000013433.a #13	ENSGT00390000008647 #12	ENSGT00940000160832 #15	ENSGT00940000153578.B #16	ENSGT00940000158857 #17	ENSGT00940000156435 #18	ENSGT00390000007164 #19	ENSGT00770000120884 #20	ENSGT00940000158310 #21	ENSGT01100000263521.a.a.b.a.b.a.b.b	ENSGT00940000154740.a.b.b #22	ENSGT00390000015381 #23	ENSGT00940000156610 #24	ENSGT00390000016224.j.b #25	ENSGT00390000009925.a #26	ENSGT00390000008825.a #27	ENSGT00940000162979	ENSGT00940000157696 #28	ENSGT00390000017673.a #29	ENSGT00390000014423	ENSGT00390000015360	ENSGT00940000157752	ENSGT00940000160812	ENSGT00390000012857	ENSGT00390000009759	ENSGT00940000159613
koala	DUPLICATION
koala	MODERN SPECIES	347									PPL (ENSPCIG00000026750) #16	UBN1 (ENSPCIG00000026711) #17	GLYR1 (ENSPCIG00000026688) #18	ROGDI (ENSPCIG00000026677) #19	SMIM22 (ENSPCIG00000032682) #20	SEPTIN12 (ENSPCIG00000026671) #21	ENSPCIG00000026668	ENSPCIG00000026667 #22	ENSPCIG00000026665 #23	ANKS3 (ENSPCIG00000026663) #24	NUDT16L1 (ENSPCIG00000035691) #25	MGRN1 (ENSPCIG00000026644) #26	UBALD1 (ENSPCIG00000026637) #27	ENSPCIG00000030897	CDIP1 (ENSPCIG00000013282) #28	HMOX2 (ENSPCIG00000013286) #29	ENSPCIG00000026628	ENSPCIG00000026620	PLK1 (ENSPCIG00000026611)	ERN2 (ENSPCIG00000026605)	UBFD1 (ENSPCIG00000026600)	ENSPCIG00000026595	GGA2 (ENSPCIG00000026592)
koala	MODERN SPECIES	100	SBK2 (ENSPCIG00000007798)	ZNF579 (ENSPCIG00000018025)	FIZ1 (ENSPCIG00000018024)	ENSPCIG00000018023	ZNF865 (ENSPCIG00000018022)	ENSPCIG00000018021	ENSPCIG00000018019	CCDC106 (ENSPCIG00000018016)	U2AF2 (ENSPCIG00000018013)	EPN1 (ENSPCIG00000018011)	ENSPCIG00000013073	ENSPCIG00000013071	ENSPCIG00000013068	ENSPCIG00000032542	NLRP12 (ENSPCIG00000013064)	ENSPCIG00000009659 #22	ENSPCIG00000036388	ENSPCIG00000009657	ENSPCIG00000009645	ENSPCIG00000009644	ENSPCIG00000009642	ENSPCIG00000023430	ENSPCIG00000009341	ENSPCIG00000032932	ENSPCIG00000002836	ENSPCIG00000016976	ENSPCIG00000022702	ENSPCIG00000023320	ENSPCIG00000022643	ENSPCIG00000005518
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1066	ENSVURG00010010809 #11	NAGPA (ENSVURG00010010852) #14	ENSVURG00010010863 #13	ENSVURG00010010881 #12	ENSVURG00010010901 #11	ENSVURG00010010907 #13	ENSVURG00010010934 #13	SEC14L5 (ENSVURG00010011065) #15	PPL (ENSVURG00010013482) #16	UBN1 (ENSVURG00010013529) #17	GLYR1 (ENSVURG00010013541) #18	ROGDI (ENSVURG00010013567) #19	ENSVURG00010013589	SEPTIN12 (ENSVURG00010013594) #21	ENSVURG00010013607	ENSVURG00010013615 #22	ENSVURG00010013624 #23	ANKS3 (ENSVURG00010013636) #24	NUDT16L1 (ENSVURG00010013656) #25	ENSVURG00010013663	MGRN1 (ENSVURG00010013675) #26	UBALD1 (ENSVURG00010013708) #27	ENSVURG00010013725	CDIP1 (ENSVURG00010013744) #28	HMOX2 (ENSVURG00010013752) #29	ENSVURG00010013763	ENSVURG00010013780	PLK1 (ENSVURG00010013798)	ERN2 (ENSVURG00010013842)	UBFD1 (ENSVURG00010013890)	EARS2 (ENSVURG00010013898)
Common wonbat	MODERN SPECIES	904								ENSVURG00010012486	ENSVURG00010012497	ENSVURG00010012507	ENSVURG00010012519	TRIM28 (ENSVURG00010012534)	CHMP2A (ENSVURG00010012563)	UBE2M (ENSVURG00010012581)	ENSVURG00010012600	ENSVURG00010012609 #22	ENSVURG00010012617	ENSVURG00010012626	RPS5 (ENSVURG00010012652)	ENSVURG00010012692	ENSVURG00010012704	ENSVURG00010012726	ENSVURG00010012731	ENSVURG00010012741	ENSVURG00010012735	ENSVURG00010012746	ENSVURG00010012750	ENSVURG00010012762	ENSVURG00010012768	ENSVURG00010012775	ZNF787 (ENSVURG00010012776)
Platypus	DUPLICATION
Platypus	MODERN SPECIES	2	ANKS3 (ENSOANG00000003821) #24	ENSOANG00000008735 #23	ENSOANG00000039790	ENSOANG00000046532	ENSOANG00000002158 #22	ENSOANG00000044812	ZKSCAN2 (ENSOANG00000041167)	ENSOANG00000046697	ENSOANG00000047125	ENSOANG00000038705	ENSOANG00000047621	ENSOANG00000041417	ENSOANG00000045608	ENSOANG00000007331	ENSOANG00000022313	ENSOANG00000040229 #22	ENSOANG00000039433	ENSOANG00000021800	ENSOANG00000005226	ENSOANG00000049921 ##22	ZNF205 (ENSOANG00000037732)	ENSOANG00000045464	ENSOANG00000038630	ENSOANG00000044769	MMP25 (ENSOANG00000007228)	BICDL2 (ENSOANG00000015213)	THOC6 (ENSOANG00000005228)	ENSOANG00000046729	TNFRSF12A (ENSOANG00000002457)	CLDN6 (ENSOANG00000037659)	CLDN9 (ENSOANG00000042792)
Platypus	MODERN SPECIES	16	KIF17 (ENSOANG00000004731)	SH2D5 (ENSOANG00000038889)	HP1BP3 (ENSOANG00000004341)	EIF4G3 (ENSOANG00000012444)	ECE1 (ENSOANG00000014757)	ALPL (ENSOANG00000043949)	RAP1GAP (ENSOANG00000005926)	USP48 (ENSOANG00000005928)	ENSOANG00000042496	ENSOANG00000043977	ENSOANG00000012297	CDC42 (ENSOANG00000046752)	WNT4 (ENSOANG00000036915)	ENSOANG00000039887 ##22	ENSOANG00000039402	ENSOANG00000036326 #22	ENSOANG00000007847	ENSOANG00000036277	ENSOANG00000011720	ENSOANG00000037060	ENSOANG00000039247	ENSOANG00000038813	SVBP (ENSOANG00000042819)	ENSOANG00000000323	C1orf50 (ENSOANG00000007982)	P3H1 (ENSOANG00000009375)	CLDN19 (ENSOANG00000048117)	ENSOANG00000011724	YBX1 (ENSOANG00000011725)	RIMKLA (ENSOANG00000009723)	ZMYND12 (ENSOANG00000009725)
Platypus	MODERN SPECIES	2	ENSOANG00000049921 ##22	ENSOANG00000005226	ENSOANG00000021800	ENSOANG00000039433	ENSOANG00000040229 #22	ENSOANG00000022313	ENSOANG00000007331	ENSOANG00000045608	ENSOANG00000041417	ENSOANG00000047621	ENSOANG00000038705	ENSOANG00000047125	ENSOANG00000046697	ZKSCAN2 (ENSOANG00000041167)	ENSOANG00000044812	ENSOANG00000002158 #22	ENSOANG00000046532	ENSOANG00000039790	ENSOANG00000008735 #23	ANKS3 (ENSOANG00000003821) #24	ENSOANG00000003819 #25	ENSOANG00000042481	GAN (ENSOANG00000009351)	PLCG2 (ENSOANG00000011330)	SDR42E1 (ENSOANG00000011331)	ENSOANG00000049044	ENSOANG00000011333	MPHOSPH6 (ENSOANG00000040792)	CDH13 (ENSOANG00000049837)	MLYCD (ENSOANG00000011336)	ENSOANG00000043261
Mammalia	DUPLICATION
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.a.a ##22
Platypus	DUPLICATION
Platypus	MODERN SPECIES	16	PINK1 (ENSOANG00000010400)	DDOST (ENSOANG00000041094)	KIF17 (ENSOANG00000004731)	SH2D5 (ENSOANG00000038889)	HP1BP3 (ENSOANG00000004341)	EIF4G3 (ENSOANG00000012444)	ECE1 (ENSOANG00000014757)	ALPL (ENSOANG00000043949)	RAP1GAP (ENSOANG00000005926)	USP48 (ENSOANG00000005928)	ENSOANG00000042496	ENSOANG00000043977	ENSOANG00000012297	CDC42 (ENSOANG00000046752)	WNT4 (ENSOANG00000036915)	ENSOANG00000039887 ##22	ENSOANG00000039402	ENSOANG00000036326 #22	ENSOANG00000007847	ENSOANG00000036277	ENSOANG00000011720	ENSOANG00000037060	ENSOANG00000039247	ENSOANG00000038813	SVBP (ENSOANG00000042819)	ENSOANG00000000323	C1orf50 (ENSOANG00000007982)	P3H1 (ENSOANG00000009375)	CLDN19 (ENSOANG00000048117)	ENSOANG00000011724	YBX1 (ENSOANG00000011725)
Platypus	MODERN SPECIES	2	ENSOANG00000002158 #22	ENSOANG00000044812	ZKSCAN2 (ENSOANG00000041167)	ENSOANG00000046697	ENSOANG00000047125	ENSOANG00000038705	ENSOANG00000047621	ENSOANG00000041417	ENSOANG00000045608	ENSOANG00000007331	ENSOANG00000022313	ENSOANG00000040229 #22	ENSOANG00000039433	ENSOANG00000021800	ENSOANG00000005226	ENSOANG00000049921 ##22	ZNF205 (ENSOANG00000037732)	ENSOANG00000045464	ENSOANG00000038630	ENSOANG00000044769	MMP25 (ENSOANG00000007228)	BICDL2 (ENSOANG00000015213)	THOC6 (ENSOANG00000005228)	ENSOANG00000046729	TNFRSF12A (ENSOANG00000002457)	CLDN6 (ENSOANG00000037659)	CLDN9 (ENSOANG00000042792)	PKMYT1 (ENSOANG00000006251)	PAQR4 (ENSOANG00000043070)	KREMEN2 (ENSOANG00000006253)	ENSOANG00000028773
Mammalia	DUPLICATION
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.a.b.a ##22
Platypus	DUPLICATION
Platypus	DUPLICATION
Platypus	DUPLICATION
Platypus	DUPLICATION
Platypus	MODERN SPECIES	1	MED25 (ENSOANG00000043111)	PNKP (ENSOANG00000040153)	AKT1S1 (ENSOANG00000045466)	TBC1D17 (ENSOANG00000050154)	ENSOANG00000043628	ENSOANG00000046696	LIG1 (ENSOANG00000002678)	ENSOANG00000051006	ENSOANG00000049253	ENSOANG00000037864	ENSOANG00000002677	ENSOANG00000037181	ENSOANG00000039197	CABP5 (ENSOANG00000002676)	ZNF787 (ENSOANG00000047226)	ENSOANG00000048652 ##22	ENSOANG00000014817	ENSOANG00000001336	ENSOANG00000010666	ENSOANG00000010668	ENSOANG00000036054	ENSOANG00000042338	ENSOANG00000007046	ENSOANG00000047750	ENSOANG00000010439	ENSOANG00000014577	ENSOANG00000001850	ENSOANG00000007045	ENSOANG00000003479	ENSOANG00000030580	ENSOANG00000036639
Platypus	MODERN SPECIES	8	ENSOANG00000036567	TAF15 (ENSOANG00000014273)	MMP28 (ENSOANG00000014274)	ENSOANG00000045644	ENSOANG00000040830	RASL10B (ENSOANG00000038310)	AP2B1 (ENSOANG00000050274)	PEX12 (ENSOANG00000042515)	UNC45B (ENSOANG00000044231)	ENSOANG00000044566	NLE1 (ENSOANG00000036408)	ENSOANG00000046664	RFFL (ENSOANG00000049711)	LIG3 (ENSOANG00000050784)	TMEM132E (ENSOANG00000043508)	ENSOANG00000050489 ##22	ENSOANG00000021072	ENSOANG00000044227	ENSOANG00000047804	ENSOANG00000002929	ENSOANG00000048769	ENSOANG00000050426	ENSOANG00000044680	ENSOANG00000040167	ENSOANG00000002927	ENSOANG00000036390	LIMK1 (ENSOANG00000002923)	ELN (ENSOANG00000043254)	ENSOANG00000040628	CLDN4 (ENSOANG00000011407)	CLDN3 (ENSOANG00000012640)
Platypus	MODERN SPECIES	1	ACVRL1 (ENSOANG00000003970)	ENSOANG00000011922	ENSOANG00000048384	RPS5 (ENSOANG00000011921)	ENSOANG00000044950	NLRP12 (ENSOANG00000009200)	ENSOANG00000011920	ENSOANG00000011919	ENSOANG00000036894	ENSOANG00000049738	ENSOANG00000011916	ENSOANG00000048774	TRIM28 (ENSOANG00000013528)	CHMP2A (ENSOANG00000043544)	ENSOANG00000050247	ENSOANG00000037891 ##22	ENSOANG00000000481	ENSOANG00000000479	ENSOANG00000041521 ##22	ENSOANG00000048776	ENSOANG00000038021 ##22	ENSOANG00000037349	ENSOANG00000047929 ##22	ENSOANG00000036639	ENSOANG00000030580	ENSOANG00000003479	ENSOANG00000007045	ENSOANG00000001850	ENSOANG00000014577	ENSOANG00000010439	ENSOANG00000047750
Platypus	MODERN SPECIES	1	ENSOANG00000010666	ENSOANG00000010668	ENSOANG00000036054	ENSOANG00000042338	ENSOANG00000007046	ENSOANG00000047750	ENSOANG00000010439	ENSOANG00000014577	ENSOANG00000001850	ENSOANG00000007045	ENSOANG00000003479	ENSOANG00000030580	ENSOANG00000036639	ENSOANG00000047929 ##22	ENSOANG00000037349	ENSOANG00000038021 ##22	ENSOANG00000048776	ENSOANG00000041521 ##22	ENSOANG00000000479	ENSOANG00000000481	ENSOANG00000037891 ##22	ENSOANG00000050247	CHMP2A (ENSOANG00000043544)	TRIM28 (ENSOANG00000013528)	ENSOANG00000048774	ENSOANG00000011916	ENSOANG00000049738	ENSOANG00000036894	ENSOANG00000011919	ENSOANG00000011920	NLRP12 (ENSOANG00000009200)
Platypus	DUPLICATION
Platypus	MODERN SPECIES	1	ENSOANG00000014817	ENSOANG00000001336	ENSOANG00000010666	ENSOANG00000010668	ENSOANG00000036054	ENSOANG00000042338	ENSOANG00000007046	ENSOANG00000047750	ENSOANG00000010439	ENSOANG00000014577	ENSOANG00000001850	ENSOANG00000007045	ENSOANG00000003479	ENSOANG00000030580	ENSOANG00000036639	ENSOANG00000047929 ##22	ENSOANG00000037349	ENSOANG00000038021 ##22	ENSOANG00000048776	ENSOANG00000041521 ##22	ENSOANG00000000479	ENSOANG00000000481	ENSOANG00000037891 ##22	ENSOANG00000050247	CHMP2A (ENSOANG00000043544)	TRIM28 (ENSOANG00000013528)	ENSOANG00000048774	ENSOANG00000011916	ENSOANG00000049738	ENSOANG00000036894	ENSOANG00000011919
Platypus	MODERN SPECIES	1	ENSOANG00000036054	ENSOANG00000042338	ENSOANG00000007046	ENSOANG00000047750	ENSOANG00000010439	ENSOANG00000014577	ENSOANG00000001850	ENSOANG00000007045	ENSOANG00000003479	ENSOANG00000030580	ENSOANG00000036639	ENSOANG00000047929 ##22	ENSOANG00000037349	ENSOANG00000038021 ##22	ENSOANG00000048776	ENSOANG00000041521 ##22	ENSOANG00000000479	ENSOANG00000000481	ENSOANG00000037891 ##22	ENSOANG00000050247	CHMP2A (ENSOANG00000043544)	TRIM28 (ENSOANG00000013528)	ENSOANG00000048774	ENSOANG00000011916	ENSOANG00000049738	ENSOANG00000036894	ENSOANG00000011919	ENSOANG00000011920	NLRP12 (ENSOANG00000009200)	ENSOANG00000044950	RPS5 (ENSOANG00000011921)
Mammalia	DUPLICATION
Mammalia	ANCESTRAL SPECIES	316															ENSGT01100000263556.a.a	ENSGT00940000154740.a.b.a.b.b.a ##22
Platypus	DUPLICATION
Platypus	DUPLICATION
Platypus	MODERN SPECIES	86	ENSOANG00000043352	ORNANAV1R3025 (ENSOANG00000046816)	ORNANAV1R3026 (ENSOANG00000051049)	ORNANAV1R3028 (ENSOANG00000041633)	ORNANAV1R3029 (ENSOANG00000036427)	ORNANAV1R3030 (ENSOANG00000036242)	ENSOANG00000005800	ORNANAV1R3047 (ENSOANG00000044841)	ENSOANG00000047008	ORNANAV1R3046 (ENSOANG00000042337)	ENSOANG00000010630	ENSOANG00000004273	ENSOANG00000045726 ##22	ENSOANG00000041198	ENSOANG00000050102	ENSOANG00000042524 ##22	ENSOANG00000011079	ENSOANG00000002231	ENSOANG00000037158	ORNANAV1R3019 (ENSOANG00000045259)	ENSOANG00000008350	ENSOANG00000039437	ENSOANG00000004407	ORNANAV1R3102 (ENSOANG00000002240)	ORNANAV1R3223 (ENSOANG00000039445)	ORNANAV1R3011 (ENSOANG00000050991)	ENSOANG00000041023	ENSOANG00000048029	ORNANAV1R3117 (ENSOANG00000049501)	ENSOANG00000050348	ORNANAV1R3120 (ENSOANG00000047122)
Platypus	MODERN SPECIES	86	ORNANAV1R3187 (ENSOANG00000049322)	ORNANAV1R3020 (ENSOANG00000042365)	ORNANAV1R3021 (ENSOANG00000047112)	ENSOANG00000043352	ORNANAV1R3025 (ENSOANG00000046816)	ORNANAV1R3026 (ENSOANG00000051049)	ORNANAV1R3028 (ENSOANG00000041633)	ORNANAV1R3029 (ENSOANG00000036427)	ORNANAV1R3030 (ENSOANG00000036242)	ENSOANG00000005800	ORNANAV1R3047 (ENSOANG00000044841)	ENSOANG00000047008	ORNANAV1R3046 (ENSOANG00000042337)	ENSOANG00000010630	ENSOANG00000004273	ENSOANG00000045726 ##22	ENSOANG00000041198	ENSOANG00000050102	ENSOANG00000042524 ##22	ENSOANG00000011079	ENSOANG00000002231	ENSOANG00000037158	ORNANAV1R3019 (ENSOANG00000045259)	ENSOANG00000008350	ENSOANG00000039437	ENSOANG00000004407	ORNANAV1R3102 (ENSOANG00000002240)	ORNANAV1R3223 (ENSOANG00000039445)	ORNANAV1R3011 (ENSOANG00000050991)	ENSOANG00000041023	ENSOANG00000048029
Platypus	MODERN SPECIES	86	ENSOANG00000004400	ENSOANG00000037225	ORNANAV1R3008 (ENSOANG00000049760)	ENSOANG00000041259	ORNANAV1R3007 (ENSOANG00000039449)	ORNANAV1R3006 (ENSOANG00000039753)	ORNANAV1R3005 (ENSOANG00000047515)	ENSOANG00000045916	ENSOANG00000044002	ORNANAV1R3004 (ENSOANG00000045822)	ENSOANG00000043255	ORNANAV1R3003 (ENSOANG00000044608)	ENSOANG00000048326	ENSOANG00000040213	ORNANAV1R3002 (ENSOANG00000044297)	ENSOANG00000037801 ##22	ORNANAV1R3001 (ENSOANG00000045356)	ENSOANG00000039956	ORNANAV1R3187 (ENSOANG00000049322)	ORNANAV1R3020 (ENSOANG00000042365)	ORNANAV1R3021 (ENSOANG00000047112)	ENSOANG00000043352	ORNANAV1R3025 (ENSOANG00000046816)	ORNANAV1R3026 (ENSOANG00000051049)	ORNANAV1R3028 (ENSOANG00000041633)	ORNANAV1R3029 (ENSOANG00000036427)	ORNANAV1R3030 (ENSOANG00000036242)	ENSOANG00000005800	ORNANAV1R3047 (ENSOANG00000044841)	ENSOANG00000047008	ORNANAV1R3046 (ENSOANG00000042337)
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.a.b.b.b ##22
Platypus	MODERN SPECIES	20	MFSD2B (ENSOANG00000007625)	UBXN2A (ENSOANG00000042505)	ATAD2B (ENSOANG00000007622)	KLHL29 (ENSOANG00000007620)	ENSOANG00000047651	APOB (ENSOANG00000003378)	LDAH (ENSOANG00000020206)	ENSOANG00000015095	ENSOANG00000004402	RHOB (ENSOANG00000008835)	WDR35 (ENSOANG00000047974)	MATN3 (ENSOANG00000037447)	LAPTM4A (ENSOANG00000001105)	ENSOANG00000001136	PUM2 (ENSOANG00000005907)	ENSOANG00000039988 ##22	GINS1 (ENSOANG00000004118)	ABHD12 (ENSOANG00000042191)	PYGB (ENSOANG00000009608)	ENTPD6 (ENSOANG00000021164)	ENSOANG00000046868	ACSS1 (ENSOANG00000003805)	ENSOANG00000040205	APMAP (ENSOANG00000038065)	ENSOANG00000041695	ENSOANG00000036826	ENSOANG00000046127	CALCRL (ENSOANG00000020803)	ZSWIM2 (ENSOANG00000030404)	TTL (ENSOANG00000030157)	NUP35 (ENSOANG00000006793)
Theria	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.a.b.b.b ##22
Marsupialia	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.a.b.b.b ##22
Marsupialia_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.a.b.b.b ##22
Diprotodontia	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.a.b.b.b ##22
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b.a.b.b.b ##22
koala	MODERN SPECIES	58	PLEC (ENSPCIG00000014981)	NRBP2 (ENSPCIG00000020290)	PUF60 (ENSPCIG00000020270)	SCRIB (ENSPCIG00000019027)	IQANK1 (ENSPCIG00000019010)	FAM83H (ENSPCIG00000019007)	ENSPCIG00000019005	ENSPCIG00000037171	ENSPCIG00000019004	ENSPCIG00000019002	ENSPCIG00000036092	ENSPCIG00000018997	ENSPCIG00000018995	ENSPCIG00000018993	ENSPCIG00000018987	ENSPCIG00000034035 ##22	ENSPCIG00000018986	ENSPCIG00000018985	ENSPCIG00000018981	ENSPCIG00000018977	ENSPCIG00000018973	ENSPCIG00000033011	ENSPCIG00000018968	ENSPCIG00000030760	ENSPCIG00000018955	ENSPCIG00000036156	ENSPCIG00000018930	ENSPCIG00000018929	ENSPCIG00000018928	ENSPCIG00000018917	ENSPCIG00000018911
Sauria	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Archelosauria	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Archosauria	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Australian saltwater crocodile	MODERN SPECIES	66									GJC1 (ENSCPRG00005015326)	HIGD1B (ENSCPRG00005015329)	EFTUD2 (ENSCPRG00005015334)	CCDC103 (ENSCPRG00005015359)	FAM187A (ENSCPRG00005015372)	GFAP (ENSCPRG00005015384)	KIF18B (ENSCPRG00005015452)	ENSCPRG00005015462 #22	ENSCPRG00005015464	ENSCPRG00005015467	FOSB (ENSCPRG00005015469)	RTN2 (ENSCPRG00005015475)	ENSCPRG00005015481	OPA3 (ENSCPRG00005015485)	DCAKD (ENSCPRG00005015489)	NMT1 (ENSCPRG00005015490)	PLCD3 (ENSCPRG00005015493)	ACBD4 (ENSCPRG00005015499)	HEXIM1 (ENSCPRG00005015504)	ENSCPRG00005015508	FMNL1 (ENSCPRG00005000131)	MAP3K14 (ENSCPRG00005000161)	MYO1D (ENSCPRG00005000311)
Aves	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Neognathae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Galloanserae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Chicken	MODERN SPECIES	24	ENSGALG00010005128	ENSGALG00010006054	ENSGALG00010005142	ENSGALG00010005194	ENSGALG00010005201	ENSGALG00010006119	ENSGALG00010004326	ENSGALG00010004328	ENSGALG00010004332	ENSGALG00010004334	ENSGALG00010004338	ENSGALG00010004341	CHMP2A (ENSGALG00010004352)	UBE2M (ENSGALG00010004369)	TRIM28 (ENSGALG00010004378)	ENSGALG00010004381 #22	ENSGALG00010004389	ZBTB45 (ENSGALG00010004393)	THAP8 (ENSGALG00010005247)	SLC27A2 (ENSGALG00010005259)	ENSGALG00010005263	ENSGALG00010005271	ENSGALG00010005273	ENSGALG00010005276	ENSGALG00010006163	ENSGALG00010005290	ENSGALG00010005298	ENSGALG00010005306	ENSGALG00010005312	ENSGALG00010005315	ENSGALG00010005320
Anatidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Pink-footed goose	MODERN SPECIES	692																ENSABRG00000005581 #22	ARHGAP9 (ENSABRG00000005544)	ENSABRG00000005502	MARS1 (ENSABRG00000005487)	DDIT3 (ENSABRG00000005482)
Neognathae_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Passeriformes	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Great tit	MODERN SPECIES	403														ENSPMJG00000003112	ENSPMJG00000003113	ENSPMJG00000003114 #22
Passeriformes_d	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Passeriformes_g	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Passeroidea	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Common canary	DUPLICATION
Common canary	MODERN SPECIES	159														ENSSCAG00000001142	ENSSCAG00000001150	ENSSCAG00000001159 #22
Common canary	DUPLICATION
Common canary	MODERN SPECIES	17	CLUAP1 (ENSSCAG00000012623)	NLRC3 (ENSSCAG00000012616)	NMRAL1 (ENSSCAG00000012615) #30	DNAJA3 (ENSSCAG00000012585) #31	VASN (ENSSCAG00000012573) #32	CORO7 (ENSSCAG00000012563) #33	PAM16 (ENSSCAG00000012557) #34	GLIS2 (ENSSCAG00000012553) #35	TFAP4 (ENSSCAG00000012546) #36	SRL (ENSSCAG00000012542) #37	ENSSCAG00000012538	ADCY9 (ENSSCAG00000012535)	CREBBP (ENSSCAG00000012506)	TRAP1 (ENSSCAG00000012494)	SLX4 (ENSSCAG00000012484)	ENSSCAG00000012479 #22	ENSSCAG00000012476	HMOX2 (ENSSCAG00000012471) #29	CDIP1 (ENSSCAG00000012467) #28	UBALD1 (ENSSCAG00000012464) #27	MGRN1 (ENSSCAG00000012451) #26	NUDT16L1 (ENSSCAG00000012445) #25	NAA60 (ENSSCAG00000012441)	DNASE1 (ENSSCAG00000012437)	DNASE1L2 (ENSSCAG00000012421)	ECI1 (ENSSCAG00000012419)	ENSSCAG00000012418	CLCN7 (ENSSCAG00000012210)	LUC7L (ENSSCAG00000012170)	FAM234A (ENSSCAG00000012162)	RGS11 (ENSSCAG00000012139)
Common canary	MODERN SPECIES	1223																ENSSCAG00000001705 #22
Cryptodira	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Chinese turtle	MODERN SPECIES	1842												CHMP2A (ENSPSIG00000015796)	ENSPSIG00000015441	TRIM28 (ENSPSIG00000013810)	ENSPSIG00000001739	ENSPSIG00000013718 #22	ZBTB45 (ENSPSIG00000013341)
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Testudinidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Abingdon island giant tortoise	MODERN SPECIES	2408	ENSCABG00000004177	PRR14 (ENSCABG00000004171)	FBRS (ENSCABG00000004163)	SRCAP (ENSCABG00000003545)	ENSCABG00000003528	PHKG2 (ENSCABG00000003526)	CFAP119 (ENSCABG00000003524)	ENSCABG00000003510	ENSCABG00000003503	RUSF1 (ENSCABG00000003472)	ENSCABG00000003467	SLC5A2 (ENSCABG00000003460)	ENSCABG00000003452	ARMC5 (ENSCABG00000003448)	TGFB1I1 (ENSCABG00000003375)	ENSCABG00000003363 #22	ENSCABG00000003361	ENSCABG00000003357	ENSCABG00000003351	ENSCABG00000003348	ENSCABG00000003345	ITPA (ENSCABG00000003341)	ENSCABG00000003337
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Three-toed box turtle	MODERN SPECIES	191	ENSTMTG00000016593	ENSTMTG00000016569	ENSTMTG00000016560	ENSTMTG00000016549	ENSTMTG00000018130	ENSTMTG00000018122	ENSTMTG00000018081	ENSTMTG00000017917	ENSTMTG00000017790	ENSTMTG00000017715	ENSTMTG00000017652	ENSTMTG00000017644	ENSTMTG00000017625	ENSTMTG00000017620	ENSTMTG00000017614	ENSTMTG00000017582 #22	ENSTMTG00000017558	ENSTMTG00000017549	ENSTMTG00000017542	ENSTMTG00000017534	ENSTMTG00000017531	ENSTMTG00000017515	ENSTMTG00000017506	ENSTMTG00000017499
painted turtle	MODERN SPECIES	1092										ZNF692 (ENSCPBG00000002996)	ENSCPBG00000002963	ENSCPBG00000002953	ENSCPBG00000002938	ENSCPBG00000002927	ENSCPBG00000002835	ENSCPBG00000002793 #22	ENSCPBG00000002769	ENSCPBG00000002734	ENSCPBG00000002724	ENSCPBG00000002713	ENSCPBG00000002701	ENSCPBG00000002674	ENSCPBG00000002647
Lepidosauria	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Episquamata	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Toxicofera	ANCESTRAL SPECIES																	ENSGT00940000154740.a.b #22
Lizard	MODERN SPECIES	1	ENSACAG00000040616	ENSACAG00000029374	ENSACAG00000011998	ENSACAG00000042226	ENSACAG00000026326	ENSACAG00000011977	TRIM7 (ENSACAG00000011919)	ENSACAG00000011790	ENSACAG00000035940	ENSACAG00000029685	ENSACAG00000024559	ENSACAG00000015706	ENSACAG00000041396	ENSACAG00000011640	ENSACAG00000040307	ENSACAG00000042100 #22	ENSACAG00000028751	ENSACAG00000041500	ENSACAG00000024790	ENSACAG00000011626	ENSACAG00000011546	ENSACAG00000011480	ENSACAG00000035637	ENSACAG00000011395	ENSACAG00000045208	ENSACAG00000028531	ENSACAG00000011401	ENSACAG00000039545	ENSACAG00000029487	ENSACAG00000011268	ENSACAG00000036855
tuatara	MODERN SPECIES	554												SENP1 (ENSSPUG00000004078)	ENSSPUG00000004100	PFKM (ENSSPUG00000004111)	ASB8 (ENSSPUG00000004143)	ENSSPUG00000004152 #22	SLC48A1 (ENSSPUG00000004158)	ENSSPUG00000004175	HDAC7 (ENSSPUG00000004218)	ENSSPUG00000004250	ENSSPUG00000004252	ENSSPUG00000004257
Amniota	ANCESTRAL SPECIES	220																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a	ENSGT01100000263500.b.a.b
Sauria	ANCESTRAL SPECIES	182																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a	ENSGT01100000263500.b.a.b
Lepidosauria	ANCESTRAL SPECIES	385																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a
Episquamata	ANCESTRAL SPECIES	241																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a
Toxicofera	ANCESTRAL SPECIES	273																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a
Elapidae	ANCESTRAL SPECIES	242																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a
Elapidae_a	ANCESTRAL SPECIES	407																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a
Acanthophiinae	ANCESTRAL SPECIES	374																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a
Mainland tiger snake	MODERN SPECIES	247						FXYD1 (ENSNSUG00000016344)	ENSNSUG00000016343	ENSNSUG00000016341	ENSNSUG00000016340	ENSNSUG00000016339	ENSNSUG00000016338	ENSNSUG00000016337	ENSNSUG00000016335	SCN1B (ENSNSUG00000016334)	GRAMD1A (ENSNSUG00000016217)	ENSNSUG00000016216 ##22	ENSNSUG00000016215	ENSNSUG00000016120	COX6B1 (ENSNSUG00000016119)	RBM42 (ENSNSUG00000016118)	ENSNSUG00000016117	ENSNSUG00000016115	MAG (ENSNSUG00000016113)	ENSNSUG00000016112	ENSNSUG00000016111	GAPDHS (ENSNSUG00000016058)	TMEM147 (ENSNSUG00000016057)	ATP4A (ENSNSUG00000016056)
Mammalia	ANCESTRAL SPECIES	320																ENSGT00940000154740.a.a ##22	ENSGT00940000159113.a
Platypus	DUPLICATION
Platypus	DUPLICATION
Platypus	MODERN SPECIES	19	ENSOANG00000037160	ORNANAV1R3220 (ENSOANG00000044179)	ENSOANG00000008369	ENSOANG00000036138	ENSOANG00000036627	ENSOANG00000043395	ORNANAV1R3181 (ENSOANG00000050539)	ORNANAV1R3043 (ENSOANG00000041644)	ENSOANG00000048489	ENSOANG00000040104	ENSOANG00000036090	ENSOANG00000039787	ENSOANG00000009664	ENSOANG00000014372	ENSOANG00000041955 ##22	ENSOANG00000005431 ##22	ENSOANG00000015609	ENSOANG00000012145	ENSOANG00000048818	ENSOANG00000043837	ENSOANG00000040269	WDR72 (ENSOANG00000013014)	ONECUT1 (ENSOANG00000040861)	SNTA1 (ENSOANG00000002101)	CBFA2T2 (ENSOANG00000002585)	ENSOANG00000040856	TMOD3 (ENSOANG00000038195)	LEO1 (ENSOANG00000003376)	MAPK6 (ENSOANG00000004189)	ENSOANG00000041390	GNB5 (ENSOANG00000047160)
Platypus	MODERN SPECIES	19	ENSOANG00000041390	MAPK6 (ENSOANG00000004189)	LEO1 (ENSOANG00000003376)	TMOD3 (ENSOANG00000038195)	ENSOANG00000040856	CBFA2T2 (ENSOANG00000002585)	SNTA1 (ENSOANG00000002101)	ONECUT1 (ENSOANG00000040861)	WDR72 (ENSOANG00000013014)	ENSOANG00000040269	ENSOANG00000043837	ENSOANG00000048818	ENSOANG00000012145	ENSOANG00000015609	ENSOANG00000005431 ##22	ENSOANG00000041955 ##22	ENSOANG00000014372	ENSOANG00000009664	ENSOANG00000039787	ENSOANG00000036090	ENSOANG00000040104	ENSOANG00000048489	ORNANAV1R3043 (ENSOANG00000041644)	ORNANAV1R3181 (ENSOANG00000050539)	ENSOANG00000043395	ENSOANG00000036627	ENSOANG00000036138	ENSOANG00000008369	ORNANAV1R3220 (ENSOANG00000044179)	ENSOANG00000037160	ORNANAV1R3189 (ENSOANG00000046058)
Platypus	MODERN SPECIES	11	TMEM98 (ENSOANG00000043732)	CACNA1H (ENSOANG00000037956)	ENSOANG00000047242	TEKT4 (ENSOANG00000028341)	ENSOANG00000042008	RPUSD1 (ENSOANG00000030625)	CHTF18 (ENSOANG00000000464)	GNG13 (ENSOANG00000000467)	ENSOANG00000038874	NSF (ENSOANG00000012509)	ENSOANG00000046801	ENSOANG00000047916	ENSOANG00000040915	ENSOANG00000044679	ORNANAV1R3268 (ENSOANG00000046336)	ENSOANG00000039729 ##22	ENSOANG00000012967	METRN (ENSOANG00000037561)	ANTKMT (ENSOANG00000037019)	ENSOANG00000030491	CIAO3 (ENSOANG00000045666)	ENSOANG00000045573	MAP3K4 (ENSOANG00000002832)	ENSOANG00000009543	SLC22A3 (ENSOANG00000040412)	SLC22A2 (ENSOANG00000007295)	IGF2R (ENSOANG00000007296)	MAS1 (ENSOANG00000012996)	TCP1 (ENSOANG00000012198)	PNLDC1 (ENSOANG00000012199)	ENSOANG00000038861
Theria	DUPLICATION
Theria	DUPLICATION
Theria	ANCESTRAL SPECIES	261																ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000154411.`b.i.e.a
Eutheria	ANCESTRAL SPECIES	7	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b	ENSGT00940000159996
Atlantogenata	ANCESTRAL SPECIES	12	ENSGT00450000040303	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b	ENSGT00940000159996
Afrotheria	ANCESTRAL SPECIES		ENSGT00450000040303	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00940000168470	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b
Afrotheria_a	ANCESTRAL SPECIES		ENSGT00450000040303	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00940000168470	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b
Elephant	MODERN SPECIES	472	ABITRAM (ENSLAFG00000006796)	CTNNAL1 (ENSLAFG00000006798)	TMEM245 (ENSLAFG00000006807)	FRRS1L (ENSLAFG00000006816)	EPB41L4B (ENSLAFG00000006820)	PTPN3 (ENSLAFG00000001914)	PALM2AKAP2 (ENSLAFG00000003658)	C9orf152 (ENSLAFG00000023199)	TXN (ENSLAFG00000012856)	ENSLAFG00000028348	SVEP1 (ENSLAFG00000015893)	MUSK (ENSLAFG00000015335)	LPAR1 (ENSLAFG00000012624)	OR2K2 (ENSLAFG00000012372)	ECPAS (ENSLAFG00000028895)	ENSLAFG00000014150 ##22	PTGR1 (ENSLAFG00000014157)	DNAJC25 (ENSLAFG00000022313)	GNG10 (ENSLAFG00000017368)	SHOC1 (ENSLAFG00000000828)	ENSLAFG00000031520	UGCG (ENSLAFG00000010355)	SUSD1 (ENSLAFG00000001177)	PTBP3 (ENSLAFG00000011358)	HSDL2 (ENSLAFG00000017197)	ENSLAFG00000030504	KIAA1958 (ENSLAFG00000009930)	ENSLAFG00000028416	INIP (ENSLAFG00000015799)	SNX30 (ENSLAFG00000008788)	SLC46A2 (ENSLAFG00000017286)
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Primates	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Haplorrhini	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Catarrhini	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Hominoidea	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Hominidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Orangutan	MODERN SPECIES	22	ELP1 (ENSPPYG00000019482)	ABITRAM (ENSPPYG00000019483)	CTNNAL1 (ENSPPYG00000019484)	TMEM245 (ENSPPYG00000019485)	FRRS1L (ENSPPYG00000019486)	EPB41L4B (ENSPPYG00000019487)	PTPN3 (ENSPPYG00000019488)	PALM2AKAP2 (ENSPPYG00000019489)	C9orf152 (ENSPPYG00000019490)	TXN (ENSPPYG00000019491)	ENSPPYG00000019492	SVEP1 (ENSPPYG00000019493)	MUSK (ENSPPYG00000019494)	LPAR1 (ENSPPYG00000019495)	ECPAS (ENSPPYG00000019497)	ENSPPYG00000019498 ##22	PTGR1 (ENSPPYG00000019499)	DNAJC25 (ENSPPYG00000019500)	GNG10 (ENSPPYG00000035831)	SHOC1 (ENSPPYG00000019501)	UGCG (ENSPPYG00000019502)	SUSD1 (ENSPPYG00000019503)	PTBP3 (ENSPPYG00000019504)	HSDL2 (ENSPPYG00000019505)	KIAA1958 (ENSPPYG00000019507)	INIP (ENSPPYG00000019508)	SNX30 (ENSPPYG00000019509)	SLC46A2 (ENSPPYG00000019510)	ZFP37 (ENSPPYG00000019511)	SLC31A2 (ENSPPYG00000019512)	FKBP15 (ENSPPYG00000019513)
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Artiodactyla	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT01050000248205	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b
Camelidae	ANCESTRAL SPECIES	5	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00390000005322	ENSGT00940000154259.l.q.a.b	ENSGT00940000154259.l.q.a.a	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT01050000248205	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b
Arabian camel	MODERN SPECIES	30	ABITRAM (ENSCDRG00005011244)	CTNNAL1 (ENSCDRG00005011053)	TMEM245 (ENSCDRG00005010838)	FRRS1L (ENSCDRG00005010771)	EPB41L4B (ENSCDRG00005010219)	PTPN3 (ENSCDRG00005009897)	ENSCDRG00005009265	C9orf152 (ENSCDRG00005009216)	ENSCDRG00005009128	ENSCDRG00005008714	SVEP1 (ENSCDRG00005008459)	MUSK (ENSCDRG00005007069)	LPAR1 (ENSCDRG00005006977)	OR2K2 (ENSCDRG00005006951)	ECPAS (ENSCDRG00005006589)	ENSCDRG00005006546 ##22	ZNF483 (ENSCDRG00005006538)	PTGR1 (ENSCDRG00005006380)	DNAJC25 (ENSCDRG00005006300)	GNG10 (ENSCDRG00005006274)	SHOC1 (ENSCDRG00005006064)	UGCG (ENSCDRG00005006026)	SUSD1 (ENSCDRG00005005542)	PTBP3 (ENSCDRG00005005319)	ENSCDRG00005005293	HSDL2 (ENSCDRG00005005245)	KIAA1958 (ENSCDRG00005005214)	INIP (ENSCDRG00005005195)	SNX30 (ENSCDRG00005005152)	SLC46A2 (ENSCDRG00005005137)	ENSCDRG00005005127
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b
Pecora	ANCESTRAL SPECIES	29	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b.c
Yarkand deer	MODERN SPECIES	7	TMEM245 (ENSCHYG00000005674)	FRRS1L (ENSCHYG00000006000)	EPB41L4B (ENSCHYG00000006064)	ENSCHYG00000006129	ENSCHYG00000006138	PTPN3 (ENSCHYG00000006180)	ENSCHYG00000006654	ENSCHYG00000006895	C9orf152 (ENSCHYG00000006922)	ENSCHYG00000006949	TXNDC8 (ENSCHYG00000007029)	SVEP1 (ENSCHYG00000007229)	MUSK (ENSCHYG00000007616)	LPAR1 (ENSCHYG00000008091)	ECPAS (ENSCHYG00000008156)	ENSCHYG00000009043 ##22	ZNF483 (ENSCHYG00000009070)	ENSCHYG00000009092	PTGR1 (ENSCHYG00000009109)	DNAJC25 (ENSCHYG00000009289)	ENSCHYG00000009325	SHOC1 (ENSCHYG00000009367)	UGCG (ENSCHYG00000009573)	SUSD1 (ENSCHYG00000009706)	PTBP3 (ENSCHYG00000010120)	ENSCHYG00000011008	HSDL2 (ENSCHYG00000011082)	KIAA1958 (ENSCHYG00000011358)	INIP (ENSCHYG00000011417)	SNX30 (ENSCHYG00000011504)	SLC46A2 (ENSCHYG00000011585)
Percora_a	ANCESTRAL SPECIES	29	ENSGT01030000234543.F	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b.c
Bovidae	ANCESTRAL SPECIES	14	ENSGT00390000001667	ENSGT00940000159043	ENSGT00390000016760.c.a.a.b	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b.c
Bovinae	ANCESTRAL SPECIES	14	ENSGT00390000001667	ENSGT00940000159043	ENSGT00390000016760.c.a.a.b	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b.c
Bos	ANCESTRAL SPECIES	10	ENSGT00390000001667	ENSGT00940000159043	ENSGT00390000016760.c.a.a.b	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b.c
Bos_a	ANCESTRAL SPECIES	20	ENSGT00390000001667	ENSGT00940000159043	ENSGT00390000016760.c.a.a.b	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000162615	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00940000168470	ENSGT00960000186678	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994
Wild yak	MODERN SPECIES	1941													ENSBMUG00000006955	OR2K2 (ENSBMUG00000006946)	ECPAS (ENSBMUG00000006874)	ENSBMUG00000006826 ##22	ZNF483 (ENSBMUG00000006802)	PTGR1 (ENSBMUG00000006796)	DNAJC25 (ENSBMUG00000006783)	ENSBMUG00000006780	SHOC1 (ENSBMUG00000006737)	UGCG (ENSBMUG00000006715)	SUSD1 (ENSBMUG00000006703)	PTBP3 (ENSBMUG00000006638)	HSDL2 (ENSBMUG00000006591)	KIAA1958 (ENSBMUG00000006577)	INIP (ENSBMUG00000006564)
Domestic yak	MODERN SPECIES	26	EPB41L4B (ENSBGRG00000002536)	ENSBGRG00000002645	ENSBGRG00000002652	PTPN3 (ENSBGRG00000002691)	ENSBGRG00000002825	PALM2AKAP2 (ENSBGRG00000002855)	C9orf152 (ENSBGRG00000002874)	ENSBGRG00000002894	ENSBGRG00000002929	SVEP1 (ENSBGRG00000002989)	MUSK (ENSBGRG00000003244)	LPAR1 (ENSBGRG00000003480)	OR2K2 (ENSBGRG00000003499)	ENSBGRG00000003507	ECPAS (ENSBGRG00000003522)	ENSBGRG00000003546 ##22	ZNF483 (ENSBGRG00000003555)	PTGR1 (ENSBGRG00000003568)	DNAJC25 (ENSBGRG00000003612)	GNG10 (ENSBGRG00000003637)	ENSBGRG00000003667	UGCG (ENSBGRG00000003727)	SUSD1 (ENSBGRG00000003795)	PTBP3 (ENSBGRG00000004149)	ENSBGRG00000004455	HSDL2 (ENSBGRG00000004880)	KIAA1958 (ENSBGRG00000005067)	INIP (ENSBGRG00000005141)	SNX30 (ENSBGRG00000005199)	ENSBGRG00000005226	SLC46A2 (ENSBGRG00000005244)
Bos_b	ANCESTRAL SPECIES	37	ENSGT00390000001667	ENSGT00940000159043	ENSGT00390000016760.c.a.a.b	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT01010000228785	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00970000197142	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b.c
Hybrid Bos Indicus	MODERN SPECIES	27	EPB41L4B (ENSBIXG00005012891)	ENSBIXG00005012733	PTPN3 (ENSBIXG00005012694)	PALM2AKAP2 (ENSBIXG00005001386)	C9orf152 (ENSBIXG00005006606)	TXN (ENSBIXG00005012502)	ENSBIXG00005001334	SVEP1 (ENSBIXG00005012398)	ENSBIXG00005012228	MUSK (ENSBIXG00005012161)	LPAR1 (ENSBIXG00005012112)	ENSBIXG00005001251	ENSBIXG00005012056	OR2K2 (ENSBIXG00005001240)	ECPAS (ENSBIXG00005012002)	ENSBIXG00005011890 ##22	ENSBIXG00005011867	PTGR1 (ENSBIXG00005011852)	ENSBIXG00005006998	DNAJC25 (ENSBIXG00005001169)	GNG10 (ENSBIXG00005001165)	SHOC1 (ENSBIXG00005011749)	ENSBIXG00005006108	UGCG (ENSBIXG00005001120)	SUSD1 (ENSBIXG00005011478)	PTBP3 (ENSBIXG00005011370)	ENSBIXG00005011254	HSDL2 (ENSBIXG00005011236)	INIP (ENSBIXG00005011177)	SLC46A2 (ENSBIXG00005011154)	ENSBIXG00005011129
American bison	DUPLICATION
American bison	MODERN SPECIES	3293							ENSBBBG00000014233	ENSBBBG00000014241	ENSBBBG00000014255	ENSBBBG00000001426	ENSBBBG00000014262	ZNF165 (ENSBBBG00000014268)	ZSCAN16 (ENSBBBG00000003237)	ZKSCAN8 (ENSBBBG00000014280)	ENSBBBG00000003242	ENSBBBG00000014289 ##22	ENSBBBG00000014293	ZSCAN9 (ENSBBBG00000014296)	ZKSCAN4 (ENSBBBG00000014307)	NKAPL (ENSBBBG00000014310)	ZSCAN26 (ENSBBBG00000006989)	ENSBBBG00000009116	ENSBBBG00000014323	ZSCAN31 (ENSBBBG00000014337)	ZSCAN12 (ENSBBBG00000003270)	ZSCAN23 (ENSBBBG00000003280)	ENSBBBG00000003283	GPX6 (ENSBBBG00000014377)	GPX5 (ENSBBBG00000003293)	SCAND3 (ENSBBBG00000003300)	ENSBBBG00000003317
American bison	MODERN SPECIES	3104	EPB41L4B (ENSBBBG00000023101)	ENSBBBG00000023041	PTPN3 (ENSBBBG00000023027)	ENSBBBG00000022897	PALM2AKAP2 (ENSBBBG00000022860)	C9orf152 (ENSBBBG00000022856)	TXN (ENSBBBG00000022850)	ENSBBBG00000022829	SVEP1 (ENSBBBG00000022798)	ENSBBBG00000007527	MUSK (ENSBBBG00000022436)	ENSBBBG00000005886	LPAR1 (ENSBBBG00000022319)	OR2K2 (ENSBBBG00000022304)	ECPAS (ENSBBBG00000005866)	ENSBBBG00000022227 ##22	PTGR1 (ENSBBBG00000005858)	DNAJC25 (ENSBBBG00000022180)	GNG10 (ENSBBBG00000022174)	SHOC1 (ENSBBBG00000022166)	UGCG (ENSBBBG00000022082)	SUSD1 (ENSBBBG00000022058)	PTBP3 (ENSBBBG00000008374)	HSDL2 (ENSBBBG00000021892)	KIAA1958 (ENSBBBG00000021859)	INIP (ENSBBBG00000021853)	SNX30 (ENSBBBG00000021834)	SLC46A2 (ENSBBBG00000021797)	ENSBBBG00000021788	ENSBBBG00000021759	ENSBBBG00000021708
Caprinae	ANCESTRAL SPECIES	14	ENSGT00390000001667	ENSGT00940000159043	ENSGT00390000016760.c.a.a.b	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.b.b	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000154740.a.a.c.a ##22	ENSGT01010000228785	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a.bb	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b.c	ENSGT00940000162711
Goat	MODERN SPECIES	27	FRRS1L (ENSCHIG00000017152)	EPB41L4B (ENSCHIG00000002945)	ENSCHIG00000004878	PTPN3 (ENSCHIG00000019167)	ENSCHIG00000013623	ENSCHIG00000025448	PALM2AKAP2 (ENSCHIG00000011730)	C9orf152 (ENSCHIG00000023217)	TXN (ENSCHIG00000013447)	TXNDC8 (ENSCHIG00000026190)	SVEP1 (ENSCHIG00000025957)	MUSK (ENSCHIG00000021059)	LPAR1 (ENSCHIG00000021183)	OR2K2 (ENSCHIG00000024856)	ECPAS (ENSCHIG00000017566)	ENSCHIG00000005172 ##22	PTGR1 (ENSCHIG00000026536)	DNAJC25 (ENSCHIG00000025048)	ENSCHIG00000015660	UGCG (ENSCHIG00000025532)	SUSD1 (ENSCHIG00000004066)	PTBP3 (ENSCHIG00000013927)	HSDL2 (ENSCHIG00000009944)	KIAA1958 (ENSCHIG00000014000)	INIP (ENSCHIG00000016237)	SNX30 (ENSCHIG00000003930)	SLC46A2 (ENSCHIG00000021557)	ENSCHIG00000013705	ZFP37 (ENSCHIG00000026520)	SLC31A2 (ENSCHIG00000015483)	FKBP15 (ENSCHIG00000027102)
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	12	ENSOARG00020007089	ENSOARG00020007075	ENSOARG00020007048	ENSOARG00020007034	ENSOARG00020007021	ENSOARG00020007002	ENSOARG00020006971	ENSOARG00020006944	ENSOARG00020006910	ENSOARG00020006874	ENSOARG00020006851	ZNF165 (ENSOARG00020006823)	ZSCAN16 (ENSOARG00020006786)	ZKSCAN8 (ENSOARG00020006714)	ZKSCAN8P1 (ENSOARG00020006686)	ENSOARG00020006651 ##22	ENSOARG00020006618	ZKSCAN4 (ENSOARG00020006511)	NKAPL (ENSOARG00020006490)	ZSCAN26 (ENSOARG00020006464)	ZSCAN31 (ENSOARG00020006424)	ENSOARG00020006368	ENSOARG00020006355	GPX6 (ENSOARG00020006321)	GPX5 (ENSOARG00020019395)	SCAND3 (ENSOARG00020019345)	TRIM27 (ENSOARG00020019206)	ENSOARG00020019184	ENSOARG00020019045	ENSOARG00020019025	ENSOARG00020018996
Rambouillet Sheep	MODERN SPECIES	11	CTNNAL1 (ENSOARG00020001849)	TMEM245 (ENSOARG00020001785)	FRRS1L (ENSOARG00020001767)	ENSOARG00020001762	EPB41L4B (ENSOARG00020001692)	PTPN3 (ENSOARG00020001469)	C9orf152 (ENSOARG00020001379)	TXN (ENSOARG00020001360)	ENSOARG00020001199	TXNDC8 (ENSOARG00020001073)	SVEP1 (ENSOARG00020000799)	MUSK (ENSOARG00020000710)	LPAR1 (ENSOARG00020000672)	OR2K2 (ENSOARG00020000629)	ECPAS (ENSOARG00020000236)	ENSOARG00020000144 ##22	ENSOARG00020000136	PTGR1 (ENSOARG00020000127)	DNAJC25 (ENSOARG00020000105)	ENSOARG00020000088	SHOC1 (ENSOARG00020022630)	UGCG (ENSOARG00020022583)	SUSD1 (ENSOARG00020022255)	PTBP3 (ENSOARG00020021946)	HSDL2 (ENSOARG00020021847)	INIP (ENSOARG00020021762)	SNX30 (ENSOARG00020021689)	SLC46A2 (ENSOARG00020021663)	ENSOARG00020021576	ENSOARG00020021542	ENSOARG00020021477
Cetacea	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Blue whale	MODERN SPECIES	2	ENSBMSG00010008148	ENSBMSG00010008154	ENSBMSG00010008159	H1-5 (ENSBMSG00010008165)	ENSBMSG00010008169	ENSBMSG00010008173	ENSBMSG00010008178	ENSBMSG00010008184	ENSBMSG00010008188	ENSBMSG00010008205	ZNF165 (ENSBMSG00010008232)	ZSCAN16 (ENSBMSG00010008239)	ZKSCAN8 (ENSBMSG00010008248)	ZKSCAN8P1 (ENSBMSG00010008259)	ENSBMSG00010008267	ENSBMSG00010008272 ##22	ENSBMSG00010008278	ZSCAN9 (ENSBMSG00010008281)	ZKSCAN4 (ENSBMSG00010008291)	ENSBMSG00010008314	ZSCAN26 (ENSBMSG00010008327)	PGBD1 (ENSBMSG00010008342)	ZSCAN31 (ENSBMSG00010008349)	ZSCAN12 (ENSBMSG00010008362)	ZSCAN23 (ENSBMSG00010008371)	ENSBMSG00010008379	ENSBMSG00010008390	GPX6 (ENSBMSG00010008400)	GPX5 (ENSBMSG00010008416)	SCAND3 (ENSBMSG00010008430)	TRIM27 (ENSBMSG00010008454)
Odontoceti	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Vaquita	MODERN SPECIES	17	FRRS1L (ENSPSNG00000015057)	ENSPSNG00000015018	ENSPSNG00000014959	EPB41L4B (ENSPSNG00000014333)	PTPN3 (ENSPSNG00000014076)	ENSPSNG00000014013	ENSPSNG00000013958	PALM2AKAP2 (ENSPSNG00000013756)	C9orf152 (ENSPSNG00000013653)	ENSPSNG00000013559	ENSPSNG00000013248	ENSPSNG00000013016	MUSK (ENSPSNG00000012408)	LPAR1 (ENSPSNG00000012287)	ECPAS (ENSPSNG00000011913)	ENSPSNG00000011832 ##22	PTGR1 (ENSPSNG00000011766)	DNAJC25 (ENSPSNG00000011729)	ENSPSNG00000011684	ENSPSNG00000011615	SHOC1 (ENSPSNG00000011205)	UGCG (ENSPSNG00000011119)	SUSD1 (ENSPSNG00000011056)	PTBP3 (ENSPSNG00000010852)	ENSPSNG00000010785	HSDL2 (ENSPSNG00000010709)	KIAA1958 (ENSPSNG00000010673)	INIP (ENSPSNG00000010596)	ENSPSNG00000010581	SNX30 (ENSPSNG00000010515)	SLC46A2 (ENSPSNG00000010457)
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Laurasiatheria_c	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Chiroptera	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Microchiroptera	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Microbat	MODERN SPECIES	980	CTNNAL1 (ENSMLUG00000012830)	ENSMLUG00000002168	FRRS1L (ENSMLUG00000002180)	EPB41L4B (ENSMLUG00000002183)	PTPN3 (ENSMLUG00000002200)	ENSMLUG00000026921	PALM2AKAP2 (ENSMLUG00000011035)	TXN (ENSMLUG00000009065)	ENSMLUG00000014115	ENSMLUG00000000351	SVEP1 (ENSMLUG00000014118)	MUSK (ENSMLUG00000003928)	LPAR1 (ENSMLUG00000003936)	ENSMLUG00000024331	ECPAS (ENSMLUG00000003939)	ENSMLUG00000009534 ##22	ENSMLUG00000009566	DNAJC25 (ENSMLUG00000028713)	SHOC1 (ENSMLUG00000009222)	UGCG (ENSMLUG00000006774)	SUSD1 (ENSMLUG00000006784)	PTBP3 (ENSMLUG00000006812)	HSDL2 (ENSMLUG00000017494)	KIAA1958 (ENSMLUG00000013357)	INIP (ENSMLUG00000011203)	SNX30 (ENSMLUG00000011227)	SLC46A2 (ENSMLUG00000011246)	ENSMLUG00000030556	ENSMLUG00000027546	ZFP37 (ENSMLUG00000008711)	ENSMLUG00000026235
Carnivora	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Caniformia	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Caniformia_b	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
Ursus	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.a ##22
American black bear	MODERN SPECIES	2434															ECPAS (ENSUAMG00000021245)	ENSUAMG00000022555 ##22
Mustelinae	ANCESTRAL SPECIES	22	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000158331	ENSGT00940000157888	ENSGT00940000161837	ENSGT00930000151059	ENSGT00390000005322	ENSGT00940000154259.l.q.a.b.a	ENSGT00940000162445	ENSGT00940000156061	ENSGT00940000158226	ENSGT01050000244941.A	ENSGT01040000240406.A.b.b	ENSGT00940000153612.A	ENSGT00940000162615	ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000154810	ENSGT00390000013355	ENSGT01100000263525.a.a	ENSGT00390000013037	ENSGT00390000012898	ENSGT00390000013892	ENSGT01050000244924.a.a.a	ENSGT00940000156729	ENSGT00440000039527	ENSGT00390000006366	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT01050000244868.a.a.a.b.a.b.b	ENSGT01040000240767	ENSGT00940000159996
Ferret	MODERN SPECIES	182	ABITRAM (ENSMPUG00000007283)	CTNNAL1 (ENSMPUG00000007294)	TMEM245 (ENSMPUG00000007317)	FRRS1L (ENSMPUG00000007340)	EPB41L4B (ENSMPUG00000007365)	PTPN3 (ENSMPUG00000007385)	ENSMPUG00000007406	C9orf152 (ENSMPUG00000007416)	TXN (ENSMPUG00000007426)	ENSMPUG00000007435	SVEP1 (ENSMPUG00000007442)	MUSK (ENSMPUG00000007465)	LPAR1 (ENSMPUG00000007592)	OR2K2 (ENSMPUG00000018565)	ECPAS (ENSMPUG00000007607)	ENSMPUG00000007633 ##22	PTGR1 (ENSMPUG00000007639)	DNAJC25 (ENSMPUG00000007650)	SHOC1 (ENSMPUG00000007674)	UGCG (ENSMPUG00000007689)	SUSD1 (ENSMPUG00000007698)	PTBP3 (ENSMPUG00000007711)	HSDL2 (ENSMPUG00000007726)	KIAA1958 (ENSMPUG00000007733)	SNX30 (ENSMPUG00000007739)	SLC46A2 (ENSMPUG00000007748)	ENSMPUG00000007756	ENSMPUG00000007827	SLC31A2 (ENSMPUG00000007831)	ENSMPUG00000007851	ENSMPUG00000007860
Marsupialia	ANCESTRAL SPECIES	183																ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000154411.`b.i.e.a.b
Marsupialia_b	ANCESTRAL SPECIES	147																ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000154411.`b.i.e.a.b
Diprotodontia	ANCESTRAL SPECIES	207																ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000154411.`b.i.e.a.b
Diprotodontia_a	ANCESTRAL SPECIES	188																ENSGT00940000154740.a.a.c.a ##22	ENSGT00940000154411.`b.i.e.a.b
koala	DUPLICATION
koala	MODERN SPECIES	14	ZMYND12 (ENSPCIG00000009168)	ENSPCIG00000009167	ENSPCIG00000009159	ENSPCIG00000009154	YBX1 (ENSPCIG00000009151)	ENSPCIG00000034606	CLDN19 (ENSPCIG00000009141)	P3H1 (ENSPCIG00000009135)	C1orf50 (ENSPCIG00000034770)	SVBP (ENSPCIG00000028099)	ENSPCIG00000000100	SLC2A1 (ENSPCIG00000000549)	ENSPCIG00000027297	ENSPCIG00000003019	ENSPCIG00000005434	ENSPCIG00000034316 ##22	ENSPCIG00000014108	ENSPCIG00000014116	PHC2 (ENSPCIG00000014123)	ZNF362 (ENSPCIG00000014128)	TRIM62 (ENSPCIG00000014133)	SERINC2 (ENSPCIG00000014138)	ENSPCIG00000034380	ZCCHC17 (ENSPCIG00000014143)	SNRNP40 (ENSPCIG00000014145)	NKAIN1 (ENSPCIG00000014146)	PUM1 (ENSPCIG00000014151)	SDC3 (ENSPCIG00000014180)	LAPTM5 (ENSPCIG00000014169)	MATN1 (ENSPCIG00000017737)	ENSPCIG00000022449
koala	DUPLICATION
koala	MODERN SPECIES	284			ACO1 (ENSPCIG00000029321)	RIG-I (ENSPCIG00000029320)	TOPORS (ENSPCIG00000029319)	SMIM27 (ENSPCIG00000031361)	NDUFB6 (ENSPCIG00000036477)	ENSPCIG00000029317	TMEM215 (ENSPCIG00000005358)	ENSPCIG00000005385	PTGR1 (ENSPCIG00000014080)	ENSPCIG00000014084	ENSPCIG00000014083	ENSPCIG00000010593	ENSPCIG00000010592	ENSPCIG00000010590 ##22	ENSPCIG00000010588	ENSPCIG00000021639
koala	MODERN SPECIES	155															ENSPCIG00000024948	ENSPCIG00000003834 ##22	ENSPCIG00000003841	ENSPCIG00000003855	ENSPCIG00000019940	ENSPCIG00000031387	ENSPCIG00000019949	ENSPCIG00000019943	ENSPCIG00000019958	ENSPCIG00000032156	ENSPCIG00000013974	ENSPCIG00000013965	ENSPCIG00000033917	ENSPCIG00000033604	ENSPCIG00000013983	ENSPCIG00000013985	ENSPCIG00000030776
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	913	ENSVURG00010000105 ##22	OR2C1 (ENSVURG00010000116)	ENSVURG00010000130	ENSVURG00010000138	ENSVURG00010000151	TIGD7 (ENSVURG00010000162)	ENSVURG00010000170	ENSVURG00010000189	ZNF200 (ENSVURG00010000210)	ENSVURG00010000221	ENSVURG00010000230	OR1F1 (ENSVURG00010000240)	ENSVURG00010000262	ZNF205 (ENSVURG00010000287)	ENSVURG00010000300	ENSVURG00010000331 ##22	MMP25 (ENSVURG00010000360)	BICDL2 (ENSVURG00010000399)	THOC6 (ENSVURG00010000425)	ENSVURG00010000462	TNFRSF12A (ENSVURG00010000478)	CLDN6 (ENSVURG00010000496)	ENSVURG00010000531	ENSVURG00010000554	KREMEN2 (ENSVURG00010000565)	SRRM2 (ENSVURG00010000592)	ENSVURG00010000633	ELOB (ENSVURG00010000648)	ENSVURG00010000665	PRSS33 (ENSVURG00010000681)	ENSVURG00010000729
Common wonbat	MODERN SPECIES	1088	ENSVURG00010009540	ENSVURG00010009544	ENSVURG00010009560	ENSVURG00010009580	ENSVURG00010009598	ENSVURG00010009632	ENSVURG00010009641	ENSVURG00010009656	ENSVURG00010009756	ENSVURG00010009763	ENSVURG00010009788	ENSVURG00010009851	ENSVURG00010009919	ENSVURG00010010057	ENSVURG00010010071	ENSVURG00010010091 ##22	ENSVURG00010010084	ENSVURG00010010098	ENSVURG00010010104	ENSVURG00010010107	ENSVURG00010010114	ENSVURG00010010125	ENSVURG00010010132	ENSVURG00010010144	CDH8 (ENSVURG00010010157)	ENSVURG00010010183	ENSVURG00010010188	ENSVURG00010010201	ENSVURG00010010215	ENSVURG00010010237	ENSVURG00010010259
Theria	ANCESTRAL SPECIES	226																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299
Eutheria	ANCESTRAL SPECIES	22	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00940000160705.C.b	ENSGT00950000183183.b.a	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986	ENSGT00940000163495	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00760000119441	ENSGT00950000182890.B.b	ENSGT00510000055200	ENSGT00940000162113	ENSGT00940000165702	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607	ENSGT00940000153104.e.b.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C
Atlantogenata	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.b ##22
Afrotheria	ANCESTRAL SPECIES	103													ENSGT00940000162299	ENSGT00760000119441	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00510000055200	ENSGT00940000162113	ENSGT00940000165702	ENSGT01090000260018.B.b	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607	ENSGT00940000153104.e.b.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00640000091486.b	ENSGT00390000014072.B	ENSGT00390000014725
Afrotheria_a	ANCESTRAL SPECIES	103													ENSGT00940000162299	ENSGT00760000119441	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00510000055200	ENSGT00940000162113	ENSGT00940000165702	ENSGT01090000260018.B.b	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607	ENSGT00940000153104.e.b.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00640000091486.b	ENSGT00390000014072.B	ENSGT00390000014725
Elephant	DUPLICATION
Elephant	MODERN SPECIES	111	AP4M1 (ENSLAFG00000022221)	MCM7 (ENSLAFG00000017252)	COPS6 (ENSLAFG00000017244)	ZNF3 (ENSLAFG00000014618)	ENSLAFG00000016162	ZKSCAN1 (ENSLAFG00000015561)	AZGP1 (ENSLAFG00000020942)	GJC3 (ENSLAFG00000031947)	ENSLAFG00000027752	ENSLAFG00000032534	ENSLAFG00000031746	ZSCAN25 (ENSLAFG00000031435)	TMEM225B (ENSLAFG00000025842)	ENSLAFG00000017505 ##22	ENSLAFG00000014746	ENSLAFG00000008561 ##22
Elephant	MODERN SPECIES	111														ENSLAFG00000008561 ##22	ENSLAFG00000014746	ENSLAFG00000017505 ##22	TMEM225B (ENSLAFG00000025842)	ZSCAN25 (ENSLAFG00000031435)	ENSLAFG00000031746	ENSLAFG00000032534	ENSLAFG00000027752	GJC3 (ENSLAFG00000031947)	AZGP1 (ENSLAFG00000020942)	ZKSCAN1 (ENSLAFG00000015561)	ENSLAFG00000016162	ZNF3 (ENSLAFG00000014618)	COPS6 (ENSLAFG00000017244)	MCM7 (ENSLAFG00000017252)	AP4M1 (ENSLAFG00000022221)	TAF6 (ENSLAFG00000013349)	CNPY4 (ENSLAFG00000014620)
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00940000160705.C.b	ENSGT00950000183183.b.a	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986	ENSGT00940000154488.A.b.a.b	ENSGT00940000163495	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000164024	ENSGT00760000119441	ENSGT00510000055200	ENSGT00940000162113	ENSGT00950000182958.a.b.b.j	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607	ENSGT00940000153104.e.b.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C
Euarchontoglires	ANCESTRAL SPECIES	128																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Primates	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.b ##22
Haplorrhini	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.b ##22
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.b ##22
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.c.b ##22
Mas night monkey	MODERN SPECIES	1284	IGFL1 (ENSANAG00000034626)	ENSANAG00000005209	HIF3A (ENSANAG00000036285)	PPP5C (ENSANAG00000038336)	CCDC8 (ENSANAG00000027675)	PNMA8A (ENSANAG00000029356)	CALM3 (ENSANAG00000035148)	PTGIR (ENSANAG00000030542)	GNG8 (ENSANAG00000023974)	DACT3 (ENSANAG00000031822)	PRKD2 (ENSANAG00000031053)	STRN4 (ENSANAG00000032421)	FKRP (ENSANAG00000019314)	SLC1A5 (ENSANAG00000021437)	AP2S1 (ENSANAG00000024767)	ENSANAG00000022565 ##22	ARHGAP35 (ENSANAG00000000237)	NPAS1 (ENSANAG00000036771)	TMEM160 (ENSANAG00000026707)	ZC3H4 (ENSANAG00000023963)	SAE1 (ENSANAG00000023379)	ENSANAG00000037922	CCDC9 (ENSANAG00000020361)	INAFM1 (ENSANAG00000035853)	C5AR1 (ENSANAG00000031163)	DHX34 (ENSANAG00000038287)	MEIS3 (ENSANAG00000037100)	ENSANAG00000034504	SLC8A2 (ENSANAG00000033218)	KPTN (ENSANAG00000030248)	NAPA (ENSANAG00000029662)
Euarchontoglires_A	ANCESTRAL SPECIES	122																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Glires	ANCESTRAL SPECIES	122																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Rodentia	ANCESTRAL SPECIES	130																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Rodentia_B	ANCESTRAL SPECIES	142																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Kangaroo rat	MODERN SPECIES	387	ENSDORG00000027487	Baiap2l1 (ENSDORG00000007704)	Nptx2 (ENSDORG00000002048)	Tmem130 (ENSDORG00000008927)	Trrap (ENSDORG00000016733)	Smurf1 (ENSDORG00000001289)	Kpna7 (ENSDORG00000001481)	ENSDORG00000016059	Arpc1b (ENSDORG00000000737)	Pdap1 (ENSDORG00000000738)	ENSDORG00000000739	Ptcd1 (ENSDORG00000000740)	Cpsf4 (ENSDORG00000000742)	Atp5j2 (ENSDORG00000000743)	Zkscan14 (ENSDORG00000006843)	ENSDORG00000027431 ##22	ENSDORG00000029957	Zscan25 (ENSDORG00000024526)	ENSDORG00000030120	ENSDORG00000012448	ENSDORG00000027377	Gjc3 (ENSDORG00000004757)	Zkscan1 (ENSDORG00000025152)	Zscan21 (ENSDORG00000009833)	Zfp113 (ENSDORG00000000945)	Cops6 (ENSDORG00000024208)	ENSDORG00000000946	Ap4m1 (ENSDORG00000019826)	Taf6 (ENSDORG00000000947)	Cnpy4 (ENSDORG00000000948)	Mblac1 (ENSDORG00000026444)
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00940000160705.C.b	ENSGT00950000183183.b.a	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986	ENSGT00940000154488.A.b.a.b	ENSGT00940000163495	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000164024	ENSGT00760000119441	ENSGT00510000055200	ENSGT00940000162113	ENSGT00950000182958.a.b.b.j	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607	ENSGT00940000153104.e.b.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00940000160705.C.b	ENSGT00950000183183.b.a	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986	ENSGT00940000154488.A.b.a.b	ENSGT00940000163495	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000164024	ENSGT00760000119441	ENSGT00950000182890.B.b	ENSGT00510000055200	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607	ENSGT00940000153104.e.b.b
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00940000160705.C.b	ENSGT00950000183183.b.a	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00950000182890.B.b	ENSGT00510000055200	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00940000160705.C.b	ENSGT00950000183183.b.a	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00950000182890.B.b	ENSGT00510000055200	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00940000160705.C.b	ENSGT00950000183183.b.a.q.a	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00950000182890.B.b	ENSGT00510000055200	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607
Pecora	ANCESTRAL SPECIES	10	ENSGT00940000153560.b.b.a	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00950000183183.b.a.q.a.c.a.b	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00950000182890.B.b	ENSGT00510000055200.a	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a.b	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607
Percora_a	ANCESTRAL SPECIES	9	ENSGT00940000153560.b.b.a	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00950000183183.b.a.q.a.c.a.b	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a.d	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00940000153104.f	ENSGT00510000055200.a	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b	ENSGT00950000182958.a.b.b.j.k.a.b.b.b	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a
Bovidae	ANCESTRAL SPECIES	11	ENSGT00940000153560.b.b.a	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00950000183183.b.a.q.a.c.a.b	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a.d	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00940000153104.f	ENSGT00510000055200.a	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b	ENSGT00950000182958.a.b.b.j.k.a.a	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a
Bovinae	ANCESTRAL SPECIES	7	ENSGT00940000153560.b.b.a	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00950000183183.b.a.q.a.c.a.b	ENSGT00950000183183.b.b.m	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a.d	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00510000055200.a	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b	ENSGT00950000182958.a.b.b.j.k.a.b.b.b	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592
Bos	ANCESTRAL SPECIES	9	ENSGT00940000153560.b.b.a	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00950000183183.b.a.q.a.c.a.b	ENSGT00950000183183.b.b.m	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a.d	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.a.b.a.b	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00510000055200.a	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b	ENSGT00950000182958.a.b.b.j.k.a.b.b.b	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a
Bos_a	ANCESTRAL SPECIES	35	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00950000183183.b.a.q.a.c.b.a	ENSGT00950000183183.b.a.q.b	ENSGT00950000183183.b.b.m	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a.d	ENSGT00940000154488.A.b.a.b	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.a.b.a.b	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00510000055200.a	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b	ENSGT00950000182958.a.b.b.j.k.a.a	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592
Wild yak	MODERN SPECIES	538							ENSBMUG00000023044	ENSBMUG00000023068	PDAP1 (ENSBMUG00000023105)	BUD31 (ENSBMUG00000023129)	PTCD1 (ENSBMUG00000023153)	CPSF4 (ENSBMUG00000023198)	ENSBMUG00000023216	ENSBMUG00000023229	ZNF394 (ENSBMUG00000023235)	ENSBMUG00000023244 ##22	ENSBMUG00000023259	ZNF789 (ENSBMUG00000023267)	FAM200A (ENSBMUG00000023277)	ZNF655 (ENSBMUG00000023339)	ENSBMUG00000023294	TMEM225B (ENSBMUG00000023356)	ZSCAN25 (ENSBMUG00000023364)	ENSBMUG00000023367	ENSBMUG00000023477	OR2AE1 (ENSBMUG00000023533)	TRIM4 (ENSBMUG00000023538)	GJC3 (ENSBMUG00000023542)	AZGP1 (ENSBMUG00000023550)	ZKSCAN1 (ENSBMUG00000023567)	ZSCAN21 (ENSBMUG00000023591)
Bos_b	ANCESTRAL SPECIES	6	ENSGT00510000048486	ENSGT00940000153560.b.b.a	ENSGT01060000248591.a.a.a.a	ENSGT00950000183188.A.b	ENSGT00390000017961	ENSGT00940000158690	ENSGT01050000244891.B	ENSGT00950000183183.b.a.q.a.c.a.b	ENSGT00950000183183.b.b.m	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986.x.a.d	ENSGT00940000162347	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.a.b.a.b	ENSGT00940000163495	ENSGT00940000164024	ENSGT00760000119441	ENSGT00510000055200.a	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a	ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b	ENSGT00950000182958.a.b.b.j.k.a.b.b.b	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a
Cow	MODERN SPECIES	17	BRI3 (ENSBTAG00000022825)	BAIAP2L1 (ENSBTAG00000019181)	NPTX2 (ENSBTAG00000045896)	TMEM130 (ENSBTAG00000005679)	TRRAP (ENSBTAG00000007113)	SMURF1 (ENSBTAG00000007118)	KPNA7 (ENSBTAG00000015737)	ARPC1A (ENSBTAG00000004242)	ARPC1B (ENSBTAG00000046248)	PDAP1 (ENSBTAG00000044040)	BUD31 (ENSBTAG00000020439)	PTCD1 (ENSBTAG00000020440)	CPSF4 (ENSBTAG00000002090)	ATP5MF (ENSBTAG00000002094)	ZNF394 (ENSBTAG00000016190)	ENSBTAG00000053161 ##22	ZKSCAN5 (ENSBTAG00000049731)	ENSBTAG00000048341	ZNF789 (ENSBTAG00000047572)	FAM200A (ENSBTAG00000051481)	ZNF655 (ENSBTAG00000030951)	TMEM225B (ENSBTAG00000039720)	ZSCAN25 (ENSBTAG00000039512)	CYP3A24 (ENSBTAG00000054260)	CYP3A76 (ENSBTAG00000053645)	CYP3A74 (ENSBTAG00000052665)	CYP3A28 (ENSBTAG00000049666)	OR2AE1 (ENSBTAG00000009840)	TRIM4 (ENSBTAG00000050135)	GJC3 (ENSBTAG00000038074)	AZGP1 (ENSBTAG00000026236)
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00940000160705.C.b	ENSGT00950000183183.b.a	ENSGT00950000183183.b.b	ENSGT00390000018509.a	ENSGT00390000014300	ENSGT00940000153974.A	ENSGT00940000155520	ENSGT00510000046986	ENSGT00940000154488.A.b.a.b	ENSGT00940000163495	ENSGT00940000162347	ENSGT00940000162299	ENSGT00940000164024	ENSGT00760000119441	ENSGT00950000182890.B.b	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768	ENSGT00510000055200	ENSGT00940000162113	ENSGT00940000165702	ENSGT00950000182958.a.b.b.j	ENSGT01090000260018.B.b	ENSGT00940000163330	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607	ENSGT00940000153104.e.b.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C	ENSGT00940000159929
Carnivora	ANCESTRAL SPECIES	98																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Caniformia	ANCESTRAL SPECIES	129																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Caniformia_b	ANCESTRAL SPECIES	145																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Mustelinae	ANCESTRAL SPECIES	322																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Ferret	MODERN SPECIES	366	ENSMPUG00000016560	NPTX2 (ENSMPUG00000016559)	TMEM130 (ENSMPUG00000016558)	TRRAP (ENSMPUG00000016556)	SMURF1 (ENSMPUG00000016554)	KPNA7 (ENSMPUG00000016543)	ENSMPUG00000016523	ARPC1B (ENSMPUG00000016522)	PDAP1 (ENSMPUG00000016521)	BUD31 (ENSMPUG00000016519)	PTCD1 (ENSMPUG00000016518)	CPSF4 (ENSMPUG00000016508)	ENSMPUG00000016506	ZNF789 (ENSMPUG00000016504)	ZNF394 (ENSMPUG00000016503)	ENSMPUG00000016494 ##22	ENSMPUG00000016492	TMEM225B (ENSMPUG00000016491)	ZSCAN25 (ENSMPUG00000016490)	ENSMPUG00000020101
Laurasiatheria_c	ANCESTRAL SPECIES	108																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Chiroptera	ANCESTRAL SPECIES	169																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Microchiroptera	ANCESTRAL SPECIES	133																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000165768
Microbat	MODERN SPECIES	937	CTXN3 (ENSMLUG00000009416)	SLC12A2 (ENSMLUG00000008327)	FBN2 (ENSMLUG00000008374)	SLC27A6 (ENSMLUG00000011142)	ISOC1 (ENSMLUG00000023846)	ENSMLUG00000029686	ENSMLUG00000010877	ARPC1A (ENSMLUG00000010912)	ARPC1B (ENSMLUG00000010933)	PDAP1 (ENSMLUG00000010959)	BUD31 (ENSMLUG00000010973)	CPSF4 (ENSMLUG00000010980)	PTCD1 (ENSMLUG00000010994)	ZNF789 (ENSMLUG00000017347)	ENSMLUG00000017348	ENSMLUG00000017349 ##22	ENSMLUG00000017351	TMEM225B (ENSMLUG00000023300)	ENSMLUG00000017353	ENSMLUG00000027083	ENSMLUG00000024696	ENSMLUG00000026442	TRIM4 (ENSMLUG00000001995)	GJC3 (ENSMLUG00000002012)	ENSMLUG00000029391	ENSMLUG00000026717	ENSMLUG00000014153	ENSMLUG00000014154	ZNF3 (ENSMLUG00000004466)	COPS6 (ENSMLUG00000014139)	MCM7 (ENSMLUG00000014145)
Marsupialia	ANCESTRAL SPECIES	165																ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000154322.C	ENSGT00940000156854.i	ENSGT00940000159717	ENSGT00940000161617	ENSGT00940000154744	ENSGT00950000182979.a.b.b.b.a.c	ENSGT00940000157296	ENSGT00730000111191	ENSGT00940000153771.A	ENSGT00940000154768.A.a	ENSGT00940000161576	ENSGT00940000163165.b.a.a	ENSGT00940000163395	ENSGT00940000162441	ENSGT00940000161396	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00950000182696.B.a	ENSGT00950000182894.A.b.b	ENSGT00390000005396	ENSGT00390000004428.a	ENSGT00940000158003	ENSGT00940000161116	ENSGT00940000163165.b.a.b	ENSGT00940000154740.a.a.d.i.a ##22	ENSGT00940000163165.b.b	ENSGT00940000162327
Diprotodontia	ANCESTRAL SPECIES	100														ENSGT00940000163395	ENSGT00940000161396	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00950000182696.B.a	ENSGT00950000182894.A.b.b	ENSGT00390000005396	ENSGT00390000004428.a	ENSGT00940000158003	ENSGT00940000161116	ENSGT00940000163165.b.a.b	ENSGT00940000154740.a.a.d.i.a ##22	ENSGT00940000163165.b.b	ENSGT00940000162327
Diprotodontia_a	ANCESTRAL SPECIES	65	ENSGT00390000001390.a.a	ENSGT00390000006933	ENSGT00390000017103	ENSGT00530000063870.a.a	ENSGT00390000005730.a.a	ENSGT00940000157510	ENSGT00940000155709	ENSGT00940000154298.a.a.b	ENSGT00940000153514.a.b	ENSGT00390000004691	ENSGT00390000014852.a	ENSGT00390000005895	ENSGT00940000163521	ENSGT00940000163395	ENSGT00940000161396	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00950000182696.B.a	ENSGT00950000182894.A.b.b	ENSGT00390000005396	ENSGT00390000004428.a	ENSGT00940000158003	ENSGT00940000161116	ENSGT00940000163165.b.a.b	ENSGT00940000154740.a.a.d.i.a ##22	ENSGT00940000163165.b.b	ENSGT00940000162327	ENSGT00940000163610	ENSGT00940000161175	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00390000018500.a
koala	MODERN SPECIES	167								CYBC1 (ENSPCIG00000016183)	HEXD (ENSPCIG00000025587)	OGFOD3 (ENSPCIG00000016943)	ENSPCIG00000031913	ZNF24 (ENSPCIG00000031093)	ENSPCIG00000016300	ENSPCIG00000016299	ENSPCIG00000035043	ENSPCIG00000032296 ##22	ENSPCIG00000016295	PMP22 (ENSPCIG00000016292)	TEKT3 (ENSPCIG00000016290)	ENSPCIG00000016285	ENSPCIG00000016271	ENSPCIG00000032612	TRIM16 (ENSPCIG00000016261)	ENSPCIG00000016254	ENSPCIG00000016251	ENSPCIG00000016248	PGBD2 (ENSPCIG00000016247)	ENSPCIG00000016245	ENSPCIG00000030941	ZNF672 (ENSPCIG00000036080)	SH3BP5L (ENSPCIG00000016231)
Theria	ANCESTRAL SPECIES	10	ENSGT00940000159318 #32	ENSGT00940000156606 #33	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT01100000263548.b.b	ENSGT00940000162817	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT00940000153683.a	ENSGT00940000163674	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000159799	ENSGT00940000160797	ENSGT00390000015278	ENSGT00390000015785
Eutheria	ANCESTRAL SPECIES	8	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00390000010652.A.a.b	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00390000010652.A.a.b	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00390000010652.A.a.b	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Primates	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Lemuriformes	ANCESTRAL SPECIES	43	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422.w.a	ENSGT00940000156422.x	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Lemuriformes_a	ANCESTRAL SPECIES	59	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357	ENSGT00940000158534.d
Greater bamboo lemur	MODERN SPECIES	1054	ENSPSMG00000011136	NGRN (ENSPSMG00000011146)	VPS33B (ENSPSMG00000011329)	PRC1 (ENSPSMG00000011465)	RCCD1 (ENSPSMG00000011580)	UNC45A (ENSPSMG00000011641)	HDDC3 (ENSPSMG00000011647)	MAN2A2 (ENSPSMG00000011712)	FES (ENSPSMG00000011933)	FURIN (ENSPSMG00000012041)	BLM (ENSPSMG00000012137)	CRTC3 (ENSPSMG00000012233)	IQGAP1 (ENSPSMG00000012389)	ZNF774 (ENSPSMG00000012444)	ENSPSMG00000012455	ENSPSMG00000012465 ##22	WDR73 (ENSPSMG00000012479)	NMB (ENSPSMG00000012489)	ENSPSMG00000012570	ZNF592 (ENSPSMG00000012624)	ENSPSMG00000012633
Coquerels sifaka	MODERN SPECIES	289	TTLL13 (ENSPCOG00000020785)	NGRN (ENSPCOG00000018441)	VPS33B (ENSPCOG00000022064)	PRC1 (ENSPCOG00000016674)	RCCD1 (ENSPCOG00000020749)	UNC45A (ENSPCOG00000020737)	HDDC3 (ENSPCOG00000001722)	MAN2A2 (ENSPCOG00000015017)	FES (ENSPCOG00000028454)	FURIN (ENSPCOG00000017388)	BLM (ENSPCOG00000000439)	CRTC3 (ENSPCOG00000015302)	IQGAP1 (ENSPCOG00000006034)	ZNF774 (ENSPCOG00000025705)	ZSCAN2 (ENSPCOG00000015193)	ENSPCOG00000025171 ##22	WDR73 (ENSPCOG00000001919)	NMB (ENSPCOG00000020152)	SEC11A (ENSPCOG00000021566)	ZNF592 (ENSPCOG00000022026)	ALPK3 (ENSPCOG00000014060)
Haplorrhini	ANCESTRAL SPECIES	36	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420
Simiiformes	ANCESTRAL SPECIES	28	ENSGT00940000160026	ENSGT00950000182902.b.a	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k.lb	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420
Catarrhini	ANCESTRAL SPECIES	9	ENSGT00950000182902.b.a	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.d	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k.lb	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420
Cercopithecidae	ANCESTRAL SPECIES	7	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a	ENSGT00390000011515.c.b	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.d	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587.a.b	ENSGT00390000006548.b.j.a.d	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a	ENSGT00390000011515.c.b	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.d	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587.a.b	ENSGT00390000006548.b.j.a.d	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00950000183498	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.d	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587.a.b	ENSGT00390000006548.b.k.mb.a.a.a.b	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Macaca	ANCESTRAL SPECIES	1	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00950000183498	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00910000147443	ENSGT00940000154146.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.d	ENSGT00940000158357	ENSGT00940000158534.d.n	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587.a.b	ENSGT00390000006548.b.k.mb.a.a.a.b	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Macaca_a	ANCESTRAL SPECIES	2	ENSGT01100000264560	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000163244.d.b.a.b.b.a.a.a.a.a.b	ENSGT00940000161660	ENSGT00940000163505.a.a.b.a.a.b.b.b.a.b	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00940000169036.b	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00940000158357	ENSGT00940000158534.d.m	ENSGT00390000015600.c.a.f.d	ENSGT00940000158534.d.n	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587.a.b	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00390000011190	ENSGT00940000157324
Crab-eating macaque	MODERN SPECIES	17	DET1 (ENSMFAG00000043815)	MRPS11 (ENSMFAG00000001006)	MRPL46 (ENSMFAG00000037394)	ENSMFAG00000049995	ENSMFAG00000059678	NTRK3 (ENSMFAG00000044160)	ENSMFAG00000049111	ENSMFAG00000063264	AGBL1 (ENSMFAG00000040080)	ENSMFAG00000052192	KLHL25 (ENSMFAG00000016945)	AKAP13 (ENSMFAG00000030975)	ENSMFAG00000034350	ENSMFAG00000047974	ZSCAN2 (ENSMFAG00000037318)	ENSMFAG00000062855 ##22	WDR73 (ENSMFAG00000003880)	ENSMFAG00000063763	ENSMFAG00000057819	SEC11A (ENSMFAG00000036341)	ZNF592 (ENSMFAG00000033727)	ENSMFAG00000035796	ENSMFAG00000063095	PDE8A (ENSMFAG00000043620)	ENSMFAG00000063534	AP3B2 (ENSMFAG00000002685)	FSD2 (ENSMFAG00000041651)	WHAMM (ENSMFAG00000001026)	ENSMFAG00000039932	ENSMFAG00000050237	HOMER2 (ENSMFAG00000044641)
Rhesus	MODERN SPECIES	17	ACAN (ENSMMUG00000000554)	ISG20 (ENSMMUG00000007669)	ENSMMUG00000059062	AEN (ENSMMUG00000022516)	ENSMMUG00000059775	DET1 (ENSMMUG00000005758)	MRPS11 (ENSMMUG00000057531)	MRPL46 (ENSMMUG00000013658)	NTRK3 (ENSMMUG00000001386)	ENSMMUG00000054316	AGBL1 (ENSMMUG00000008495)	KLHL25 (ENSMMUG00000050063)	AKAP13 (ENSMMUG00000011251)	ENSMMUG00000058850	ZSCAN2 (ENSMMUG00000022080)	ENSMMUG00000053640 ##22	WDR73 (ENSMMUG00000002403)	NMB (ENSMMUG00000045634)	SEC11A (ENSMMUG00000011486)	ZNF592 (ENSMMUG00000010432)	SLC28A1 (ENSMMUG00000016772)	ENSMMUG00000049563	ENSMMUG00000056737	PDE8A (ENSMMUG00000019838)	ENSMMUG00000056767	ENSMMUG00000063204	RPS17 (ENSMMUG00000011328)	AP3B2 (ENSMMUG00000000617)	FSD2 (ENSMMUG00000019138)	WHAMM (ENSMMUG00000003498)	RAMAC (ENSMMUG00000050617)
Hominoidea	ANCESTRAL SPECIES	28	ENSGT00950000182902.b.a	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k.lb	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000156839.bb.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190.m.b
Gibbon	MODERN SPECIES	21	RLBP1 (ENSNLEG00000011513)	ENSNLEG00000029391	ABHD2 (ENSNLEG00000011501)	MFGE8 (ENSNLEG00000011483)	HAPLN3 (ENSNLEG00000011475)	ENSNLEG00000030173	ISG20 (ENSNLEG00000033379)	AEN (ENSNLEG00000032314)	MRPS11 (ENSNLEG00000034839)	MRPL46 (ENSNLEG00000011430)	NTRK3 (ENSNLEG00000011410)	AGBL1 (ENSNLEG00000011396)	KLHL25 (ENSNLEG00000011390)	AKAP13 (ENSNLEG00000011353)	ZSCAN2 (ENSNLEG00000011329)	ENSNLEG00000018883 ##22	WDR73 (ENSNLEG00000011299)	NMB (ENSNLEG00000011294)	ENSNLEG00000028435	ZNF592 (ENSNLEG00000011267)	ENSNLEG00000011262	SLC28A1 (ENSNLEG00000011198)	PDE8A (ENSNLEG00000011058)	ENSNLEG00000031165	ENSNLEG00000029963	CPEB1 (ENSNLEG00000011018)	AP3B2 (ENSNLEG00000011002)	ENSNLEG00000033316	FSD2 (ENSNLEG00000010971)	ENSNLEG00000010962	HOMER2 (ENSNLEG00000010953)
Hominidae	ANCESTRAL SPECIES	27	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00390000011515.c.b.b	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587	ENSGT00390000007252.d.a.a	ENSGT00550000074806.jb.b	ENSGT00390000006548.b.k.mb.a.a.a.b	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000156839.bb.b	ENSGT00940000158441
Orangutan	MODERN SPECIES	6	MFGE8 (ENSPPYG00000006759)	HAPLN3 (ENSPPYG00000006758)	ENSPPYG00000006757	ISG20 (ENSPPYG00000006756)	AEN (ENSPPYG00000006755)	DET1 (ENSPPYG00000006753)	MRPS11 (ENSPPYG00000006751)	MRPL46 (ENSPPYG00000006750)	NTRK3 (ENSPPYG00000006749)	AGBL1 (ENSPPYG00000006747)	ENSPPYG00000037873	KLHL25 (ENSPPYG00000006746)	AKAP13 (ENSPPYG00000006745)	ENSPPYG00000006873	ZSCAN2 (ENSPPYG00000006877)	ENSPPYG00000039060 ##22	WDR73 (ENSPPYG00000006879)	ENSPPYG00000036271	SEC11A (ENSPPYG00000006881)	ZNF592 (ENSPPYG00000035797)	ENSPPYG00000031798	ENSPPYG00000029615	SLC28A1 (ENSPPYG00000006884)	PDE8A (ENSPPYG00000006885)	ENSPPYG00000030954	ENSPPYG00000006888	CPEB1 (ENSPPYG00000006889)	AP3B2 (ENSPPYG00000006890)	FSD2 (ENSPPYG00000006733)	HOMER2 (ENSPPYG00000006735)	RAMAC (ENSPPYG00000006736)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	30															ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000011515.c.b.b	ENSGT00940000154146.a	ENSGT00950000182983.B.b	ENSGT00940000160936	ENSGT00940000155645	ENSGT00390000015400	ENSGT00390000016068	ENSGT00390000005224
Homo/Pan group	ANCESTRAL SPECIES	29															ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000011515.c.b.b	ENSGT00940000154146.a	ENSGT00950000182983.B.b	ENSGT00940000160936	ENSGT00940000155645	ENSGT00390000015400	ENSGT00390000016068	ENSGT00390000005224
Pan	ANCESTRAL SPECIES	34															ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000011515.c.b.b	ENSGT00940000154146.a	ENSGT00950000182983.B.b	ENSGT00940000160936	ENSGT00940000155645	ENSGT00390000015400	ENSGT00390000016068	ENSGT00390000005224
Chimpanzee	MODERN SPECIES	6	RAMAC (ENSPTRG00000007387)	C15H15orf40 (ENSPTRG00000007388)	BTBD1 (ENSPTRG00000007389)	ENSPTRG00000048161	ENSPTRG00000040903	TM6SF1 (ENSPTRG00000007390)	ENSPTRG00000046104	HDGFL3 (ENSPTRG00000007391)	BNC1 (ENSPTRG00000007392)	SH3GL3 (ENSPTRG00000007393)	ADAMTSL3 (ENSPTRG00000007394)	ENSPTRG00000046190	ENSPTRG00000050545	ENSPTRG00000047158	ZSCAN2 (ENSPTRG00000007400)	ENSPTRG00000047486 ##22	WDR73 (ENSPTRG00000007402)	NMB (ENSPTRG00000007403)	SEC11A (ENSPTRG00000007404)	ZNF592 (ENSPTRG00000007405)	ALPK3 (ENSPTRG00000007406)	SLC28A1 (ENSPTRG00000007407)	PDE8A (ENSPTRG00000007408)	ENSPTRG00000047141	AKAP13 (ENSPTRG00000007414)	KLHL25 (ENSPTRG00000007415)	AGBL1 (ENSPTRG00000007416)	NTRK3 (ENSPTRG00000007418)	MRPL46 (ENSPTRG00000007419)	MRPS11 (ENSPTRG00000007420)	DET1 (ENSPTRG00000007421)
Bonobo	MODERN SPECIES	6	ENSPPAG00000019101	BTBD1 (ENSPPAG00000034480)	ENSPPAG00000033798	ENSPPAG00000012238	TM6SF1 (ENSPPAG00000040733)	ENSPPAG00000033304	HDGFL3 (ENSPPAG00000040199)	BNC1 (ENSPPAG00000011672)	SH3GL3 (ENSPPAG00000006912)	ADAMTSL3 (ENSPPAG00000036039)	ENSPPAG00000035324	ENSPPAG00000039672	MEX3B (ENSPPAG00000020407)	ENSPPAG00000033982	ZSCAN2 (ENSPPAG00000027143)	ENSPPAG00000007219 ##22	WDR73 (ENSPPAG00000037416)	ENSPPAG00000027246	ENSPPAG00000040737	ZNF592 (ENSPPAG00000037402)	ENSPPAG00000036550	SLC28A1 (ENSPPAG00000038512)	PDE8A (ENSPPAG00000043724)	ENSPPAG00000028694	AKAP13 (ENSPPAG00000039683)	KLHL25 (ENSPPAG00000024283)	AGBL1 (ENSPPAG00000037816)	NTRK3 (ENSPPAG00000042420)	MRPL46 (ENSPPAG00000040630)	MRPS11 (ENSPPAG00000028073)	DET1 (ENSPPAG00000042560)
Gorilla	MODERN SPECIES	6	WHAMM (ENSGGOG00000000283)	HOMER2 (ENSGGOG00000015739)	ENSGGOG00000022754	ENSGGOG00000023062	BTBD1 (ENSGGOG00000009446)	ENSGGOG00000036519	TM6SF1 (ENSGGOG00000015013)	ENSGGOG00000002068	BNC1 (ENSGGOG00000006610)	SH3GL3 (ENSGGOG00000000478)	ADAMTSL3 (ENSGGOG00000012200)	ENSGGOG00000012325	ENSGGOG00000008894	ENSGGOG00000042764	ZSCAN2 (ENSGGOG00000014609)	ENSGGOG00000044133 ##22	WDR73 (ENSGGOG00000014625)	NMB (ENSGGOG00000014633)	ENSGGOG00000011129	ZNF592 (ENSGGOG00000009373)	ALPK3 (ENSGGOG00000009380)	SLC28A1 (ENSGGOG00000009389)	PDE8A (ENSGGOG00000014523)	ENSGGOG00000041210	AKAP13 (ENSGGOG00000000774)	KLHL25 (ENSGGOG00000010730)	AGBL1 (ENSGGOG00000034983)	NTRK3 (ENSGGOG00000010222)	MRPL46 (ENSGGOG00000015148)	MRPS11 (ENSGGOG00000015152)	DET1 (ENSGGOG00000015157)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.d ##22
Mas night monkey	MODERN SPECIES	966	SH3GL3 (ENSANAG00000025662)	BNC1 (ENSANAG00000027373)	HDGFL3 (ENSANAG00000023725)	TM6SF1 (ENSANAG00000026365)	BTBD1 (ENSANAG00000027401)	C15orf40 (ENSANAG00000027132)	ENSANAG00000026987	HOMER2 (ENSANAG00000025169)	WHAMM (ENSANAG00000026975)	FSD2 (ENSANAG00000026243)	AP3B2 (ENSANAG00000027090)	CPEB1 (ENSANAG00000027594)	ENSANAG00000026929	ZSCAN2 (ENSANAG00000023842)	ENSANAG00000027003	ENSANAG00000026971 ##22	WDR73 (ENSANAG00000023533)	NMB (ENSANAG00000025389)	SEC11A (ENSANAG00000026730)	ENSANAG00000023536	ZNF592 (ENSANAG00000023866)	ALPK3 (ENSANAG00000023039)	SLC28A1 (ENSANAG00000026896)	PDE8A (ENSANAG00000024243)	AKAP13 (ENSANAG00000027868)	KLHL25 (ENSANAG00000018034)	CDO1 (ENSANAG00000025385)	ATG12 (ENSANAG00000023055)	ENSANAG00000023676	LVRN (ENSANAG00000027157)	ARL14EPL (ENSANAG00000023687)
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Equus	ANCESTRAL SPECIES	4	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Donkey	MODERN SPECIES	11	ENSEASG00005027932	ENSEASG00005006502	PRC1 (ENSEASG00005006516)	RCCD1 (ENSEASG00005006692)	UNC45A (ENSEASG00005006694)	HDDC3 (ENSEASG00005006697)	MAN2A2 (ENSEASG00005006699)	FES (ENSEASG00005006705)	FURIN (ENSEASG00005006710)	BLM (ENSEASG00005006727)	ENSEASG00005028389	CRTC3 (ENSEASG00005006853)	ENSEASG00005006876	ENSEASG00005032976	ENSEASG00005006884	ENSEASG00005032159 ##22	ENSEASG00005036281	WDR73 (ENSEASG00005006891)	NMB (ENSEASG00005035473)	SEC11A (ENSEASG00005006897)	ZNF592 (ENSEASG00005006915)	ALPK3 (ENSEASG00005006923)	SLC28A1 (ENSEASG00005006947)	ENSEASG00005006954	ENSEASG00005023808	CPEB1 (ENSEASG00005006958)	AP3B2 (ENSEASG00005006959)	FSD2 (ENSEASG00005006964)	WHAMM (ENSEASG00005006968)	HOMER2 (ENSEASG00005006974)	ENSEASG00005038465
Horse	MODERN SPECIES		VPS33B (ENSECAG00000025016)	PRC1 (ENSECAG00000017906)	RCCD1 (ENSECAG00000017879)	UNC45A (ENSECAG00000018965)	HDDC3 (ENSECAG00000017200)	MAN2A2 (ENSECAG00000018866)	FES (ENSECAG00000000836)	FURIN (ENSECAG00000019913)	BLM (ENSECAG00000011405)	ENSECAG00000028298	CRTC3 (ENSECAG00000024475)	IQGAP1 (ENSECAG00000023879)	ENSECAG00000060063	ZSCAN2 (ENSECAG00000022470)	ENSECAG00000050833	ENSECAG00000051040 ##22	ENSECAG00000012271	WDR73 (ENSECAG00000008151)	NMB (ENSECAG00000008013)	SEC11A (ENSECAG00000021187)	ZNF592 (ENSECAG00000056144)	ZNF592 (ENSECAG00000016283)	SLC28A1 (ENSECAG00000007499)	ENSECAG00000024902	PDE8A (ENSECAG00000007337)	CPEB1 (ENSECAG00000016873)	AP3B2 (ENSECAG00000019658)	ENSECAG00000019211	FSD2 (ENSECAG00000017074)	WHAMM (ENSECAG00000015813)	HOMER2 (ENSECAG00000023619)
Carnivora	ANCESTRAL SPECIES		ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b
Felidae	ANCESTRAL SPECIES	1	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C.d	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710.d	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Panthera	ANCESTRAL SPECIES	31	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000171302	ENSGT00940000156800	ENSGT00390000010652.C.d	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710.d	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Panthera_a	ANCESTRAL SPECIES	33	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000171302	ENSGT00940000156800	ENSGT00390000010652.C.d	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710.d	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
leopard	MODERN SPECIES	35	NGRN (ENSPPRG00000017958)	VPS33B (ENSPPRG00000017429)	PRC1 (ENSPPRG00000013559)	RCCD1 (ENSPPRG00000011903)	UNC45A (ENSPPRG00000010555)	HDDC3 (ENSPPRG00000008187)	MAN2A2 (ENSPPRG00000006998)	FES (ENSPPRG00000006609)	FURIN (ENSPPRG00000003153)	BLM (ENSPPRG00000002471)	CRTC3 (ENSPPRG00000022790)	IQGAP1 (ENSPPRG00000023896)	ZNF774 (ENSPPRG00000018865)	ZSCAN2 (ENSPPRG00000017114)	ENSPPRG00000015523	ENSPPRG00000014920 ##22	WDR73 (ENSPPRG00000014859)	NMB (ENSPPRG00000014674)	ENSPPRG00000013836	ZNF592 (ENSPPRG00000012464)	SLC28A1 (ENSPPRG00000011202)	PDE8A (ENSPPRG00000009604)	RPS17 (ENSPPRG00000006966)	CPEB1 (ENSPPRG00000006440)	AP3B2 (ENSPPRG00000002778)	FSD2 (ENSPPRG00000013845)	WHAMM (ENSPPRG00000012988)	HOMER2 (ENSPPRG00000011675)	ENSPPRG00000011086	C15orf40 (ENSPPRG00000010940)	BTBD1 (ENSPPRG00000010853)
lion	MODERN SPECIES	6	NGRN (ENSPLOG00000020027)	VPS33B (ENSPLOG00000019738)	PRC1 (ENSPLOG00000019636)	RCCD1 (ENSPLOG00000019497)	UNC45A (ENSPLOG00000019288)	HDDC3 (ENSPLOG00000019175)	MAN2A2 (ENSPLOG00000019142)	FES (ENSPLOG00000018837)	FURIN (ENSPLOG00000018670)	ENSPLOG00000018631	BLM (ENSPLOG00000018572)	CRTC3 (ENSPLOG00000018390)	IQGAP1 (ENSPLOG00000018225)	ZNF774 (ENSPLOG00000017985)	ZSCAN2 (ENSPLOG00000017927)	ENSPLOG00000017819 ##22	ENSPLOG00000017741	WDR73 (ENSPLOG00000017670)	NMB (ENSPLOG00000017624)	SEC11A (ENSPLOG00000017428)	ZNF592 (ENSPLOG00000017374)	ENSPLOG00000017356	SLC28A1 (ENSPLOG00000017104)	PDE8A (ENSPLOG00000016584)	ENSPLOG00000016490	CPEB1 (ENSPLOG00000016045)	AP3B2 (ENSPLOG00000015177)	FSD2 (ENSPLOG00000014756)	WHAMM (ENSPLOG00000014721)	HOMER2 (ENSPLOG00000014554)	ENSPLOG00000014521
Tiger	MODERN SPECIES	112	NGRN (ENSPTIG00000000316)	VPS33B (ENSPTIG00000019885)	PRC1 (ENSPTIG00000019480)	UNC45A (ENSPTIG00000019053)	HDDC3 (ENSPTIG00000019000)	MAN2A2 (ENSPTIG00000018511)	FES (ENSPTIG00000017453)	FURIN (ENSPTIG00000016644)	ENSPTIG00000016594	BLM (ENSPTIG00000016168)	CRTC3 (ENSPTIG00000015609)	IQGAP1 (ENSPTIG00000014210)	ZNF774 (ENSPTIG00000013971)	ENSPTIG00000013822	ENSPTIG00000010256	ENSPTIG00000010247 ##22	WDR73 (ENSPTIG00000013573)	NMB (ENSPTIG00000013457)	SEC11A (ENSPTIG00000012827)	ZNF592 (ENSPTIG00000012392)	ALPK3 (ENSPTIG00000012152)	SLC28A1 (ENSPTIG00000011873)	PDE8A (ENSPTIG00000010986)	RPS17 (ENSPTIG00000010841)	CPEB1 (ENSPTIG00000010359)	AP3B2 (ENSPTIG00000009568)	FSD2 (ENSPTIG00000009332)	HOMER2 (ENSPTIG00000009131)	ENSPTIG00000009107	C15orf40 (ENSPTIG00000008915)	BTBD1 (ENSPTIG00000008830)
Caniformia	ANCESTRAL SPECIES	12	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d.i	ENSGT00940000158534.d.j	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000162263	ENSGT00940000162024	ENSGT00940000159113.a	ENSGT00940000162456.j	ENSGT00940000154740.a.a.d ##22	ENSGT01100000263548.b.b	ENSGT00940000162456.i.a	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT00940000153683.a	ENSGT00940000163674	ENSGT00940000156663.A	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000167188	ENSGT00940000159799	ENSGT00940000160797	ENSGT00390000015278
Mustelinae	ANCESTRAL SPECIES	15	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000162263	ENSGT00940000162024	ENSGT00940000154740.a.a.d ##22	ENSGT01100000263548.b.b	ENSGT00940000162456.i.a	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT00940000153683.a.hb	ENSGT00940000153683.a.gb	ENSGT00940000156663.A	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000167188	ENSGT00940000159799	ENSGT00940000160797	ENSGT00390000015278
Ferret	MODERN SPECIES	189	CORO7 (ENSMPUG00000015012) #33	VASN (ENSMPUG00000020051) #32	PAM16 (ENSMPUG00000015016) #34	GLIS2 (ENSMPUG00000015020) #35	TFAP4 (ENSMPUG00000015023) #36	SRL (ENSMPUG00000015025) #37	ADCY9 (ENSMPUG00000015032)	CREBBP (ENSMPUG00000015036)	TRAP1 (ENSMPUG00000015044)	DNASE1 (ENSMPUG00000015047)	SLX4 (ENSMPUG00000015049)	NLRC3 (ENSMPUG00000015052)	CLUAP1 (ENSMPUG00000015102)	ZNF597 (ENSMPUG00000015106)	ZNF174 (ENSMPUG00000015107)	ENSMPUG00000015110 ##22	OR2C1 (ENSMPUG00000020052)	ENSMPUG00000015119	ENSMPUG00000015125	TIGD7 (ENSMPUG00000020053)	MEFV (ENSMPUG00000015143)	ZNF200 (ENSMPUG00000015174)	ENSMPUG00000020054	ENSMPUG00000020055	ENSMPUG00000020056	ENSMPUG00000015182	ZNF205 (ENSMPUG00000015184)	ZSCAN10 (ENSMPUG00000015190)	ENSMPUG00000015202	MMP25 (ENSMPUG00000015204)	ENSMPUG00000015236
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154740.a.a.d ##22
Giant Panda	MODERN SPECIES	19	ENSAMEG00000013570	ENSAMEG00000013607	PRC1 (ENSAMEG00000013667)	RCCD1 (ENSAMEG00000013688)	UNC45A (ENSAMEG00000013689)	HDDC3 (ENSAMEG00000013735)	MAN2A2 (ENSAMEG00000013741)	FES (ENSAMEG00000013803)	FURIN (ENSAMEG00000013812)	BLM (ENSAMEG00000013843)	ENSAMEG00000030648	CRTC3 (ENSAMEG00000013883)	IQGAP1 (ENSAMEG00000013896)	ENSAMEG00000013989	ENSAMEG00000013986	ENSAMEG00000025784 ##22	WDR73 (ENSAMEG00000013994)	NMB (ENSAMEG00000026039)	ENSAMEG00000014016	ZNF592 (ENSAMEG00000014030)	ENSAMEG00000027913	ENSAMEG00000014038	SLC28A1 (ENSAMEG00000014044)	ENSAMEG00000014097	RPS17 (ENSAMEG00000014129)	AP3B2 (ENSAMEG00000014158)	FSD2 (ENSAMEG00000014228)	WHAMM (ENSAMEG00000014243)	HOMER2 (ENSAMEG00000014256)	RAMAC (ENSAMEG00000030535)	ENSAMEG00000028576
Canidae	ANCESTRAL SPECIES	21	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d.i	ENSGT00940000158534.d.j	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k.j.a	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441
Red fox	MODERN SPECIES	1	TTLL13 (ENSVVUG00000006600)	ENSVVUG00000006598	VPS33B (ENSVVUG00000006570)	PRC1 (ENSVVUG00000006549)	ENSVVUG00000006500	UNC45A (ENSVVUG00000006491)	MAN2A2 (ENSVVUG00000006455)	HDDC3 (ENSVVUG00000006447)	FES (ENSVVUG00000006439)	FURIN (ENSVVUG00000006425)	BLM (ENSVVUG00000006402)	CRTC3 (ENSVVUG00000006291)	IQGAP1 (ENSVVUG00000006256)	ZNF774 (ENSVVUG00000006241)	ZSCAN2 (ENSVVUG00000006240)	ENSVVUG00000006239 ##22	ENSVVUG00000006236	WDR73 (ENSVVUG00000006217)	NMB (ENSVVUG00000006212)	SEC11A (ENSVVUG00000006206)	ZNF592 (ENSVVUG00000006182)	ENSVVUG00000006157	ENSVVUG00000006150	SLC28A1 (ENSVVUG00000006123)	PDE8A (ENSVVUG00000006066)	RPS17 (ENSVVUG00000005945)	CPEB1 (ENSVVUG00000005937)	AP3B2 (ENSVVUG00000005164)	FSD2 (ENSVVUG00000005129)	WHAMM (ENSVVUG00000005121)	HOMER2 (ENSVVUG00000005118)
Canis_lupus	ANCESTRAL SPECIES	23	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d.i	ENSGT00940000158534.d.j	ENSGT01050000248139	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441
Dog	DUPLICATION
Dog	MODERN SPECIES	34	CORO7 (ENSCAFG00845001104) #33	VASN (ENSCAFG00845001337) #32	GLIS2 (ENSCAFG00845001353) #35	TFAP4 (ENSCAFG00845001381) #36	ADCY9 (ENSCAFG00845001452)	CREBBP (ENSCAFG00845001617)	TRAP1 (ENSCAFG00845001854)	DNASE1 (ENSCAFG00845002013)	SLX4 (ENSCAFG00845002090)	NLRC3 (ENSCAFG00845002151)	CLUAP1 (ENSCAFG00845002243)	C16orf90 (ENSCAFG00845002321)	NAA60 (ENSCAFG00845002379)	ZNF597 (ENSCAFG00845002433)	ZNF174 (ENSCAFG00845002472)	ENSCAFG00845002488 ##22	OR2C1 (ENSCAFG00845002502)	ENSCAFG00845002516	ENSCAFG00845002529	ZNF75A (ENSCAFG00845002590)	ENSCAFG00845002632	TIGD7 (ENSCAFG00845002663)	ZNF263 (ENSCAFG00845002674)	MEFV (ENSCAFG00845002706)	ZNF200 (ENSCAFG00845002760)	ENSCAFG00845002782	ENSCAFG00845002832	ZNF213 (ENSCAFG00845002922)	ZNF205 (ENSCAFG00845002949)	ZSCAN10 (ENSCAFG00845002983)	MMP25 (ENSCAFG00845003017)
Dog	MODERN SPECIES	22	TTLL13 (ENSCAFG00845001321)	NGRN (ENSCAFG00845001368)	VPS33B (ENSCAFG00845001444)	PRC1 (ENSCAFG00845001624)	RCCD1 (ENSCAFG00845001726)	UNC45A (ENSCAFG00845001793)	MAN2A2 (ENSCAFG00845001985)	HDDC3 (ENSCAFG00845002145)	FES (ENSCAFG00845002249)	FURIN (ENSCAFG00845002348)	BLM (ENSCAFG00845002429)	ENSCAFG00845002533	IQGAP1 (ENSCAFG00845002591)	ZNF774 (ENSCAFG00845002640)	ENSCAFG00845002675	ENSCAFG00845002718 ##22	ENSCAFG00845002756	WDR73 (ENSCAFG00845002803)	NMB (ENSCAFG00845002835)	SEC11A (ENSCAFG00845002905)	ZNF592 (ENSCAFG00845002986)	ALPK3 (ENSCAFG00845003070)	ENSCAFG00845003127	ENSCAFG00845003154	ENSCAFG00845003266	RPS17 (ENSCAFG00845003480)	CPEB1 (ENSCAFG00845003572)	AP3B2 (ENSCAFG00845003752)	ENSCAFG00845003881	FSD2 (ENSCAFG00845003925)	WHAMM (ENSCAFG00845003974)
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Pecora	ANCESTRAL SPECIES	18	ENSGT00940000174015.a	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Percora_a	ANCESTRAL SPECIES	20	ENSGT00940000174015.a	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Bovidae	ANCESTRAL SPECIES	20	ENSGT00940000174015.a	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00390000006654	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Caprinae	ANCESTRAL SPECIES	22	ENSGT00390000016718	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149.c	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420.e
Goat	MODERN SPECIES	13	VPS33B (ENSCHIG00000013457)	PRC1 (ENSCHIG00000002572)	RCCD1 (ENSCHIG00000017401)	UNC45A (ENSCHIG00000021276)	HDDC3 (ENSCHIG00000016009)	MAN2A2 (ENSCHIG00000014616)	FES (ENSCHIG00000017144)	FURIN (ENSCHIG00000022482)	BLM (ENSCHIG00000010329)	ENSCHIG00000006931	CRTC3 (ENSCHIG00000018523)	IQGAP1 (ENSCHIG00000010086)	ENSCHIG00000010682	ZNF774 (ENSCHIG00000022555)	ZSCAN2 (ENSCHIG00000009795)	ENSCHIG00000012909 ##22	WDR73 (ENSCHIG00000021388)	NMB (ENSCHIG00000010123)	SEC11A (ENSCHIG00000000513)	ZNF592 (ENSCHIG00000014764)	ALPK3 (ENSCHIG00000015898)	SLC28A1 (ENSCHIG00000010176)	PDE8A (ENSCHIG00000017618)	ENSCHIG00000023561	CPEB1 (ENSCHIG00000026000)	AP3B2 (ENSCHIG00000002499)	FSD2 (ENSCHIG00000022656)	WHAMM (ENSCHIG00000014865)	HOMER2 (ENSCHIG00000014529)	ENSCHIG00000006828	ENSCHIG00000015479
Cetacea	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00940000167480	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.n	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422.y	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	6	GLIS2 (ENSBMSG00010015632) #35	TFAP4 (ENSBMSG00010015602) #36	SRL (ENSBMSG00010015551) #37	ENSBMSG00010015539	ADCY9 (ENSBMSG00010015513)	CREBBP (ENSBMSG00010014906)	ENSBMSG00010014684	DNASE1 (ENSBMSG00010014613)	SLX4 (ENSBMSG00010014398)	NLRC3 (ENSBMSG00010014271)	CLUAP1 (ENSBMSG00010014224)	C16orf90 (ENSBMSG00010014168)	NAA60 (ENSBMSG00010014132)	ZNF597 (ENSBMSG00010014095)	ZNF174 (ENSBMSG00010014005)	ENSBMSG00010013960 ##22	ENSBMSG00010013935	ENSBMSG00010013903	TIGD7 (ENSBMSG00010013878)	ENSBMSG00010012819	ENSBMSG00010012802	ZNF200 (ENSBMSG00010012792)	OR1F1 (ENSBMSG00010012781)	ZNF213 (ENSBMSG00010012767)	ZNF205 (ENSBMSG00010012755)	ZSCAN10 (ENSBMSG00010012728)	MMP25 (ENSBMSG00010012715)	BICDL2 (ENSBMSG00010012672)	THOC6 (ENSBMSG00010012614)	HCFC1R1 (ENSBMSG00010012562)	ENSBMSG00010012537
Blue whale	MODERN SPECIES	11	VPS33B (ENSBMSG00010003172)	PRC1 (ENSBMSG00010003136)	RCCD1 (ENSBMSG00010003034)	UNC45A (ENSBMSG00010002958)	HDDC3 (ENSBMSG00010002908)	MAN2A2 (ENSBMSG00010002865)	FES (ENSBMSG00010002555)	FURIN (ENSBMSG00010002419)	ENSBMSG00010002382	BLM (ENSBMSG00010002346)	ENSBMSG00010002284	CRTC3 (ENSBMSG00010002190)	IQGAP1 (ENSBMSG00010002121)	ZNF774 (ENSBMSG00010002074)	ZSCAN2 (ENSBMSG00010002036)	ENSBMSG00010002024 ##22	ENSBMSG00010002008	WDR73 (ENSBMSG00010001998)	NMB (ENSBMSG00010001981)	ENSBMSG00010001925	ZNF592 (ENSBMSG00010001882)	ENSBMSG00010001821	ENSBMSG00010001789	PDE8A (ENSBMSG00010001702)	ENSBMSG00010001631	RPS17 (ENSBMSG00010001615)	CPEB1 (ENSBMSG00010001564)	AP3B2 (ENSBMSG00010001277)	FSD2 (ENSBMSG00010001006)	WHAMM (ENSBMSG00010000949)	HOMER2 (ENSBMSG00010000920)
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.n	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422.y	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420
Sperm whale	MODERN SPECIES	2	VPS33B (ENSPCTG00005001247)	PRC1 (ENSPCTG00005001166)	RCCD1 (ENSPCTG00005001102)	UNC45A (ENSPCTG00005001009)	HDDC3 (ENSPCTG00005000959)	MAN2A2 (ENSPCTG00005000898)	ENSPCTG00005000875	ENSPCTG00005000676	FURIN (ENSPCTG00005000552)	ENSPCTG00005000495	BLM (ENSPCTG00005022354)	CRTC3 (ENSPCTG00005022350)	IQGAP1 (ENSPCTG00005022324)	ZNF774 (ENSPCTG00005022305)	ZSCAN2 (ENSPCTG00005022293)	ENSPCTG00005022284 ##22	ZNF592 (ENSPCTG00005022266)	SEC11A (ENSPCTG00005022240)	PDE8A (ENSPCTG00005022193)	ENSPCTG00005022163	CPEB1 (ENSPCTG00005022154)	AP3B2 (ENSPCTG00005022063)	FSD2 (ENSPCTG00005021984)	WHAMM (ENSPCTG00005021965)	HOMER2 (ENSPCTG00005021951)	RAMAC (ENSPCTG00005021937)	ENSPCTG00005021930	BTBD1 (ENSPCTG00005021918)	TM6SF1 (ENSPCTG00005021905)	ENSPCTG00005021881	ENSPCTG00005021865
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.n	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422.y	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.n	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00940000156422.y	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756
Monodontidae	ANCESTRAL SPECIES	22	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00390000015600.c.a.n	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00940000156422.y	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b
Narwhal	MODERN SPECIES	299	TFAP4 (ENSMMNG00015008791) #36	SRL (ENSMMNG00015008778) #37	ENSMMNG00015008772	ADCY9 (ENSMMNG00015008755)	CREBBP (ENSMMNG00015008719)	TRAP1 (ENSMMNG00015008665)	DNASE1 (ENSMMNG00015008633)	SLX4 (ENSMMNG00015008618)	NLRC3 (ENSMMNG00015008601)	ENSMMNG00015008587	CLUAP1 (ENSMMNG00015008525)	C16orf90 (ENSMMNG00015008490)	NAA60 (ENSMMNG00015008465)	ZNF597 (ENSMMNG00015008442)	ZNF174 (ENSMMNG00015008424)	ENSMMNG00015008397 ##22	ENSMMNG00015008384	ENSMMNG00015008370	TIGD7 (ENSMMNG00015008360)	ENSMMNG00015008349	ENSMMNG00015008338	ZNF200 (ENSMMNG00015008329)	OR2C1 (ENSMMNG00015008318)	OR1F1 (ENSMMNG00015008306)	ENSMMNG00015008299	ZNF213 (ENSMMNG00015008278)	ZNF205 (ENSMMNG00015008262)	ZSCAN10 (ENSMMNG00015008241)	MMP25 (ENSMMNG00015008229)	BICDL2 (ENSMMNG00015008199)	THOC6 (ENSMMNG00015008157)
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	48	GLIS2 (ENSDLEG00000015124) #35	TFAP4 (ENSDLEG00000015107) #36	SRL (ENSDLEG00000015031) #37	ADCY9 (ENSDLEG00000015006)	CREBBP (ENSDLEG00000014949)	TRAP1 (ENSDLEG00000014903)	DNASE1 (ENSDLEG00000014884)	SLX4 (ENSDLEG00000014863)	NLRC3 (ENSDLEG00000014797)	ENSDLEG00000014785	C16orf90 (ENSDLEG00000014769)	CLUAP1 (ENSDLEG00000014731)	NAA60 (ENSDLEG00000014711)	ZNF597 (ENSDLEG00000014697)	ZNF174 (ENSDLEG00000014678)	ENSDLEG00000014669 ##22	ENSDLEG00000014658	ZNF75A (ENSDLEG00000014614)	TIGD7 (ENSDLEG00000014604)	ENSDLEG00000014566	ENSDLEG00000014554	ENSDLEG00000014532	ENSDLEG00000014520	OR2C1 (ENSDLEG00000014506)	ENSDLEG00000014472	ZNF213 (ENSDLEG00000014444)	ZNF205 (ENSDLEG00000014431)	ZSCAN10 (ENSDLEG00000014415)	MMP25 (ENSDLEG00000014372)	BICDL2 (ENSDLEG00000014338)	THOC6 (ENSDLEG00000014275)
Beluga whale	MODERN SPECIES	52	NGRN (ENSDLEG00000008384)	VPS33B (ENSDLEG00000008286)	PRC1 (ENSDLEG00000007797)	RCCD1 (ENSDLEG00000007763)	UNC45A (ENSDLEG00000007759)	HDDC3 (ENSDLEG00000007755)	MAN2A2 (ENSDLEG00000007741)	FES (ENSDLEG00000007733)	FURIN (ENSDLEG00000007721)	BLM (ENSDLEG00000007694)	CRTC3 (ENSDLEG00000007679)	IQGAP1 (ENSDLEG00000007663)	ZNF774 (ENSDLEG00000007656)	ENSDLEG00000007650	ZSCAN2 (ENSDLEG00000007647)	ENSDLEG00000007644 ##22	WDR73 (ENSDLEG00000007633)	SEC11A (ENSDLEG00000007620)	ZNF592 (ENSDLEG00000007614)	ALPK3 (ENSDLEG00000007554)	ENSDLEG00000007485	RPS17 (ENSDLEG00000007470)	CPEB1 (ENSDLEG00000007340)	AP3B2 (ENSDLEG00000007293)	FSD2 (ENSDLEG00000007263)	WHAMM (ENSDLEG00000007245)	HOMER2 (ENSDLEG00000007224)	FAM103A1 (ENSDLEG00000007216)	ENSDLEG00000007211	ENSDLEG00000007204	BTBD1 (ENSDLEG00000007193)
Vaquita	DUPLICATION
Vaquita	MODERN SPECIES	6	PAM16 (ENSPSNG00000006075) #34	GLIS2 (ENSPSNG00000006050) #35	TFAP4 (ENSPSNG00000006029) #36	SRL (ENSPSNG00000005976) #37	ADCY9 (ENSPSNG00000005835)	CREBBP (ENSPSNG00000005625)	TRAP1 (ENSPSNG00000005485)	DNASE1 (ENSPSNG00000005432)	SLX4 (ENSPSNG00000005399)	NLRC3 (ENSPSNG00000005323)	CLUAP1 (ENSPSNG00000005252)	C16orf90 (ENSPSNG00000005200)	NAA60 (ENSPSNG00000005149)	ZNF597 (ENSPSNG00000005116)	ZNF174 (ENSPSNG00000005095)	ENSPSNG00000005071 ##22	ENSPSNG00000005046	ENSPSNG00000005017	TIGD7 (ENSPSNG00000005003)	ENSPSNG00000004989	ENSPSNG00000004968	ZNF200 (ENSPSNG00000004941)	ENSPSNG00000004828	ZNF213 (ENSPSNG00000004799)	ZNF205 (ENSPSNG00000004782)	ZSCAN10 (ENSPSNG00000004729)	MMP25 (ENSPSNG00000019892)	BICDL2 (ENSPSNG00000019749)	THOC6 (ENSPSNG00000019667)	HCFC1R1 (ENSPSNG00000019549)	ENSPSNG00000019478
Vaquita	MODERN SPECIES	11	ENSPSNG00000001800	NGRN (ENSPSNG00000001785)	VPS33B (ENSPSNG00000001673)	PRC1 (ENSPSNG00000001597)	RCCD1 (ENSPSNG00000001555)	UNC45A (ENSPSNG00000001490)	HDDC3 (ENSPSNG00000001455)	MAN2A2 (ENSPSNG00000001418)	FES (ENSPSNG00000001314)	FURIN (ENSPSNG00000001242)	BLM (ENSPSNG00000001212)	CRTC3 (ENSPSNG00000001180)	IQGAP1 (ENSPSNG00000001082)	ZNF774 (ENSPSNG00000001011)	ZSCAN2 (ENSPSNG00000000995)	ENSPSNG00000000972 ##22	ENSPSNG00000000963	WDR73 (ENSPSNG00000000936)	NMB (ENSPSNG00000000921)	ENSPSNG00000000885	ZNF592 (ENSPSNG00000000853)	ENSPSNG00000000838	PDE8A (ENSPSNG00000000747)	RPS17 (ENSPSNG00000000697)	CPEB1 (ENSPSNG00000000649)	AP3B2 (ENSPSNG00000000392)	FSD2 (ENSPSNG00000000101)	ENSPSNG00000000036	WHAMM (ENSPSNG00000003878)	HOMER2 (ENSPSNG00000003853)	ENSPSNG00000003836
Atlantogenata	ANCESTRAL SPECIES	2	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420
Xenarthra	ANCESTRAL SPECIES	186													ENSGT01100000263486.a.b.a.b.a	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.a	ENSGT00940000163486	ENSGT00940000154740.a.a.d ##22	ENSGT00940000163165	ENSGT00940000161576	ENSGT00940000163521	ENSGT00940000159644	ENSGT00940000163102	ENSGT00940000162298	ENSGT00940000162327	ENSGT00940000163314	ENSGT00940000163682	ENSGT00940000163105	ENSGT00940000162869	ENSGT01090000260044.A.b.a.a.a.a.b	ENSGT00940000161098	ENSGT00940000163329
Armadillo	MODERN SPECIES	3211											ENSDNOG00000048934	ENSDNOG00000040405	ENSDNOG00000030747	ENSDNOG00000030741	ENSDNOG00000043363	ENSDNOG00000046920 ##22	ZSCAN16 (ENSDNOG00000013588)	ZKSCAN8 (ENSDNOG00000013609)	ENSDNOG00000046063	ZSCAN9 (ENSDNOG00000039730)	ZKSCAN4 (ENSDNOG00000047646)	NKAPL (ENSDNOG00000018346)	ZSCAN26 (ENSDNOG00000048739)	ENSDNOG00000038927	ZSCAN31 (ENSDNOG00000042121)	ZKSCAN3 (ENSDNOG00000033262)	ENSDNOG00000036404	ENSDNOG00000046452	ENSDNOG00000040069	ENSDNOG00000031043	GPX6 (ENSDNOG00000007151)
Afrotheria	ANCESTRAL SPECIES	20	ENSGT00940000158927	ENSGT00390000016718	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420
Afrotheria_a	ANCESTRAL SPECIES	19	ENSGT00940000158927	ENSGT00390000016718	ENSGT00940000161367	ENSGT00390000014472	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d ##22	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00390000006548.b.k	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420
Elephant	MODERN SPECIES	285	GDPGP1 (ENSLAFG00000022790)	TTLL13 (ENSLAFG00000005024)	NGRN (ENSLAFG00000020610)	VPS33B (ENSLAFG00000010644)	PRC1 (ENSLAFG00000013123)	RCCD1 (ENSLAFG00000007122)	UNC45A (ENSLAFG00000007118)	HDDC3 (ENSLAFG00000007114)	MAN2A2 (ENSLAFG00000007107)	FES (ENSLAFG00000005977)	FURIN (ENSLAFG00000003407)	ENSLAFG00000009335	CRTC3 (ENSLAFG00000001143)	IQGAP1 (ENSLAFG00000016736)	ZSCAN2 (ENSLAFG00000001521)	ENSLAFG00000031866 ##22	WDR73 (ENSLAFG00000010104)	NMB (ENSLAFG00000010107)	SEC11A (ENSLAFG00000017084)	ZNF592 (ENSLAFG00000012391)	ALPK3 (ENSLAFG00000012401)	SLC28A1 (ENSLAFG00000012416)	PDE8A (ENSLAFG00000012422)	ENSLAFG00000031717	CPEB1 (ENSLAFG00000020795)	AP3B2 (ENSLAFG00000014765)	FSD2 (ENSLAFG00000008089)	WHAMM (ENSLAFG00000010645)	HOMER2 (ENSLAFG00000006706)	ENSLAFG00000008134	C15orf40 (ENSLAFG00000014381)
Marsupialia	DUPLICATION
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES	179																ENSGT00940000154740.a.a.d.i.a ##22	ENSGT00940000163165
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000154768.A.a	ENSGT00940000161576	ENSGT00940000163165.b.a.a	ENSGT00940000163395	ENSGT00940000162441	ENSGT00940000161396	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00950000182696.B.a	ENSGT00950000182894.A.b.b	ENSGT00390000005396	ENSGT00390000004428.a	ENSGT00940000158003	ENSGT00940000161116	ENSGT00940000163165.b.a.b	ENSGT00940000154740.a.a.d.i.a ##22	ENSGT00940000163165.b.b	ENSGT00940000162327
Diprotodontia	ANCESTRAL SPECIES	100					ENSGT00940000163395	ENSGT00940000161396	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00950000182696.B.a	ENSGT00950000182894.A.b.b	ENSGT00390000005396	ENSGT00390000004428.a	ENSGT00940000158003	ENSGT00940000161116	ENSGT00940000163165.b.a.b	ENSGT00940000154740.a.a.d.i.a ##22	ENSGT00940000163165.b.b	ENSGT00940000162327
Diprotodontia_a	ANCESTRAL SPECIES	65	ENSGT00390000004691	ENSGT00390000014852.a	ENSGT00390000005895	ENSGT00940000163521	ENSGT00940000163395	ENSGT00940000161396	ENSGT00940000154740.a.a.c.b ##22	ENSGT00940000162299	ENSGT00950000182696.B.a	ENSGT00950000182894.A.b.b	ENSGT00390000005396	ENSGT00390000004428.a	ENSGT00940000158003	ENSGT00940000161116	ENSGT00940000163165.b.a.b	ENSGT00940000154740.a.a.d.i.a ##22	ENSGT00940000163165.b.b	ENSGT00940000162327	ENSGT00940000163610	ENSGT00940000161175	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00390000018500.a	ENSGT01090000259995.a.a.a	ENSGT01090000260018.A.a.a.a.b.a	ENSGT01090000260018.A.a.a.b.d	ENSGT01090000260018.A.a.a.a.a.b.b.a	ENSGT01090000260018.A.a.a.a.a.a	ENSGT01090000260018.A.a.a.a.b.b	ENSGT01100000263486.a.b.a.b.b	ENSGT00940000162246	ENSGT01090000260045.C.e.a.b
Common wonbat	MODERN SPECIES	258	CYBC1 (ENSVURG00010015978)	HEXD (ENSVURG00010016007)	OGFOD3 (ENSVURG00010016016)	ENSVURG00010016024	ZNF24 (ENSVURG00010016030)	ENSVURG00010016039	ENSVURG00010016045	ENSVURG00010016051	ZKSCAN5 (ENSVURG00010016078)	PMP22 (ENSVURG00010016198)	ENSVURG00010016204	ENSVURG00010016208	ENSVURG00010016215	ENSVURG00010016234	TRIM16 (ENSVURG00010016344)	ENSVURG00010016359 ##22	ZSCAN16 (ENSVURG00010016370)	ENSVURG00010016379	PGBD2 (ENSVURG00010016388)	ENSVURG00010016402	ZNF692 (ENSVURG00010016431)	ENSVURG00010016436	SH3BP5L (ENSVURG00010016440)	ENSVURG00010016449	ENSVURG00010016456	ENSVURG00010016463	ENSVURG00010016468
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000154740.a.a.d.i.b ##22	ENSGT01100000263548.b.b	ENSGT00940000154488.A.a.b.a	ENSGT00940000162817.a	ENSGT00940000162817.b	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT01090000260005.a.a.a.b.b	ENSGT00940000153683.a.f	ENSGT00940000163674.a	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000159799	ENSGT00940000160797
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000154740.a.a.d.i.b ##22	ENSGT00940000154740.b ##22	ENSGT01100000263548.b.b	ENSGT00940000154488.A.a.b.a	ENSGT00940000162817.a	ENSGT00940000162817.b	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT01090000260005.a.a.a.b.b	ENSGT00940000153683.a.f	ENSGT00940000163674.a	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000159799
Tasmanian devil	MODERN SPECIES		VASN (ENSSHAG00000023167) #32	PAM16 (ENSSHAG00000010911) #34	GLIS2 (ENSSHAG00000027247) #35	TFAP4 (ENSSHAG00000011487) #36	SRL (ENSSHAG00000011715) #37	ADCY9 (ENSSHAG00000012593)	CREBBP (ENSSHAG00000013866)	TRAP1 (ENSSHAG00000014559)	DNASE1 (ENSSHAG00000014640)	ENSSHAG00000014874	ENSSHAG00000027277	NLRC3 (ENSSHAG00000015094)	CLUAP1 (ENSSHAG00000015334)	C16orf90 (ENSSHAG00000020997)	NAA60 (ENSSHAG00000015512)	ENSSHAG00000025643 ##22	ENSSHAG00000015817 ##22	OR2C1 (ENSSHAG00000015908)	ENSSHAG00000022378	ENSSHAG00000016146	ENSSHAG00000021708	TIGD7 (ENSSHAG00000026550)	ENSSHAG00000002634	ENSSHAG00000016426	ZNF200 (ENSSHAG00000022067)	ENSSHAG00000029853	OR1F1 (ENSSHAG00000016771)	ENSSHAG00000017117	ENSSHAG00000026381	ENSSHAG00000031619	ZSCAN10 (ENSSHAG00000031007)
Diprotodontia	ANCESTRAL SPECIES	59	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000154740.a.a.d.i.b ##22	ENSGT00940000154740.b ##22	ENSGT01100000263548.b.b	ENSGT00940000154488.A.a.b.a	ENSGT00940000162817.a	ENSGT00940000162817.b	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT01090000260005.a.a.a.b.b	ENSGT00940000153683.a.f	ENSGT00940000163674.a	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000159799
Wallaby	MODERN SPECIES	4840																ENSMEUG00000012317 ##22
Diprotodontia_a	ANCESTRAL SPECIES	17	ENSGT00940000156606 #33	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000154740.a.a.d.i.b ##22	ENSGT00940000154740.b ##22	ENSGT01100000263548.b.b	ENSGT00940000154488.A.a.b.a	ENSGT00940000162817.a	ENSGT00940000162817.b	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT01090000260005.a.a.a.b.b.b	ENSGT01090000260005.a.a.a.b.b.a	ENSGT00940000153683.a.f	ENSGT00940000163674.a	ENSGT00940000161865	ENSGT00940000162513
Common wonbat	MODERN SPECIES	913	VASN (ENSVURG00010017539) #32	PAM16 (ENSVURG00010017547) #34	GLIS2 (ENSVURG00010017563) #35	TFAP4 (ENSVURG00010017578) #36	SRL (ENSVURG00010017592) #37	ADCY9 (ENSVURG00010017597)	CREBBP (ENSVURG00010017612)	ENSVURG00010017638	TRAP1 (ENSVURG00010017644)	DNASE1 (ENSVURG00010017652)	ENSVURG00010017658	NLRC3 (ENSVURG00010017668)	CLUAP1 (ENSVURG00010017688)	C16orf90 (ENSVURG00010017705)	NAA60 (ENSVURG00010000084)	ENSVURG00010000091 ##22	ENSVURG00010000105 ##22	OR2C1 (ENSVURG00010000116)	ENSVURG00010000130	ENSVURG00010000138	ENSVURG00010000151	TIGD7 (ENSVURG00010000162)	ENSVURG00010000170	ENSVURG00010000189	ZNF200 (ENSVURG00010000210)	ENSVURG00010000221	ENSVURG00010000230	OR1F1 (ENSVURG00010000240)	ENSVURG00010000262	ZNF205 (ENSVURG00010000287)	ENSVURG00010000300
Opossum	MODERN SPECIES	5	CORO7 (ENSMODG00000016364) #33	VASN (ENSMODG00000016371) #32	GLIS2 (ENSMODG00000016375) #35	TFAP4 (ENSMODG00000016377) #36	SRL (ENSMODG00000039537) #37	ADCY9 (ENSMODG00000016382)	CREBBP (ENSMODG00000016396)	TRAP1 (ENSMODG00000016402)	DNASE1 (ENSMODG00000016406)	ENSMODG00000016412	NLRC3 (ENSMODG00000016414)	CLUAP1 (ENSMODG00000016420)	C16orf90 (ENSMODG00000037670)	NAA60 (ENSMODG00000016422)	ENSMODG00000028385	ENSMODG00000016425 ##22	ENSMODG00000025510	ENSMODG00000040050	ENSMODG00000049480	ENSMODG00000024585	ENSMODG00000027730	ENSMODG00000037348	TIGD7 (ENSMODG00000016431)	ENSMODG00000016443	ENSMODG00000016453	ZNF200 (ENSMODG00000024573)	ENSMODG00000016457	ENSMODG00000024572	OR1F1 (ENSMODG00000024571)	ENSMODG00000027548	ENSMODG00000016461
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000158698	ENSGT00530000063555.B	ENSGT01030000234641.b.a.b.a.a	ENSGT00990000203892	ENSGT00950000183002.C	ENSGT00940000154078.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d.j ##22	ENSGT00940000167480	ENSGT00390000005462	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000158698	ENSGT00530000063555.B	ENSGT01030000234641.b.a.b.a.a.k	ENSGT00990000203892	ENSGT00950000183002.C	ENSGT00940000154078.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d.j ##22	ENSGT00940000167480	ENSGT00390000005462	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756
Diprotodontia	ANCESTRAL SPECIES						ENSGT00950000183002.C	ENSGT00940000154078.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d.j ##22	ENSGT00940000167480	ENSGT00390000005462	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756
Diprotodontia_a	ANCESTRAL SPECIES	1					ENSGT00950000183002.C	ENSGT00940000154078.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186	ENSGT00530000064017.a	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000161710	ENSGT00940000154740.a.a.d.j ##22	ENSGT00940000167480	ENSGT00390000005462	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756
koala	MODERN SPECIES	6	TLX1 (ENSPCIG00000031947)	KAZALD1 (ENSPCIG00000003284)	ENSPCIG00000002751	ENSPCIG00000002730	PDZD7 (ENSPCIG00000002702)	LZTS2 (ENSPCIG00000002692)	TWNK (ENSPCIG00000002680)	MRPL43 (ENSPCIG00000031987)	SEMA4G (ENSPCIG00000002663)	ENSPCIG00000001129	PAX2 (ENSPCIG00000001066)	HIF1AN (ENSPCIG00000001045)	NDUFB8 (ENSPCIG00000001035)	SEC31B (ENSPCIG00000001002)	ZSCAN2 (ENSPCIG00000000965)	ENSPCIG00000034543 ##22	ENSPCIG00000033059	HYI (ENSPCIG00000000916)	WDR73 (ENSPCIG00000036456)	ENSPCIG00000000879	ENSPCIG00000003671	ZNF592 (ENSPCIG00000015567)	ALPK3 (ENSPCIG00000015580)	SLC28A1 (ENSPCIG00000001185)	PDE8A (ENSPCIG00000004017)	FSD2 (ENSPCIG00000031815)	WHAMM (ENSPCIG00000017598)	HOMER2 (ENSPCIG00000008372)	ENSPCIG00000008378	ENSPCIG00000008382	BTBD1 (ENSPCIG00000008389)
Amniota	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Theria	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Marsupialia	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000154740.a.a.d.i.b ##22	ENSGT00940000154740.b ##22	ENSGT01100000263548.b.b	ENSGT00940000154488.A.a.b.a	ENSGT00940000162817.a	ENSGT00940000162817.b	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT01090000260005.a.a.a.b.b	ENSGT00940000153683.a.f	ENSGT00940000163674.a	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000159799	ENSGT00940000160797
Diprotodontia	ANCESTRAL SPECIES	59	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000154740.a.a.d.i.b ##22	ENSGT00940000154740.b ##22	ENSGT01100000263548.b.b	ENSGT00940000154488.A.a.b.a	ENSGT00940000162817.a	ENSGT00940000162817.b	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT01090000260005.a.a.a.b.b	ENSGT00940000153683.a.f	ENSGT00940000163674.a	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000159799	ENSGT00940000160797
Diprotodontia_a	ANCESTRAL SPECIES	17	ENSGT00940000159318 #32	ENSGT00390000012037 #34	ENSGT00940000158383 #35	ENSGT00390000015189 #36	ENSGT00940000157834 #37	ENSGT00940000155577	ENSGT00940000155364	ENSGT01020000230401.b.b	ENSGT00950000182846.b.q	ENSGT00390000014091	ENSGT00940000159861	ENSGT00390000008957	ENSGT00390000014875	ENSGT00390000008314	ENSGT00940000154740.a.a.d.i.b ##22	ENSGT00940000154740.b ##22	ENSGT01100000263548.b.b	ENSGT00940000154488.A.a.b.a	ENSGT00940000162817.a	ENSGT00940000162817.b	ENSGT00940000163295	ENSGT00940000159965.f.b	ENSGT00940000161955	ENSGT00940000162595	ENSGT01090000260005.a.a.a.b.b.b	ENSGT01090000260005.a.a.a.b.b.a	ENSGT00940000153683.a.f	ENSGT00940000163674.a	ENSGT00940000161865	ENSGT00940000162513	ENSGT00940000159799
Common wonbat	MODERN SPECIES	913	PAM16 (ENSVURG00010017547) #34	GLIS2 (ENSVURG00010017563) #35	TFAP4 (ENSVURG00010017578) #36	SRL (ENSVURG00010017592) #37	ADCY9 (ENSVURG00010017597)	CREBBP (ENSVURG00010017612)	ENSVURG00010017638	TRAP1 (ENSVURG00010017644)	DNASE1 (ENSVURG00010017652)	ENSVURG00010017658	NLRC3 (ENSVURG00010017668)	CLUAP1 (ENSVURG00010017688)	C16orf90 (ENSVURG00010017705)	NAA60 (ENSVURG00010000084)	ENSVURG00010000091 ##22	ENSVURG00010000105 ##22	OR2C1 (ENSVURG00010000116)	ENSVURG00010000130	ENSVURG00010000138	ENSVURG00010000151	TIGD7 (ENSVURG00010000162)	ENSVURG00010000170	ENSVURG00010000189	ZNF200 (ENSVURG00010000210)	ENSVURG00010000221	ENSVURG00010000230	OR1F1 (ENSVURG00010000240)	ENSVURG00010000262	ZNF205 (ENSVURG00010000287)	ENSVURG00010000300	ENSVURG00010000331 ##22
Tasmanian devil	MODERN SPECIES		PAM16 (ENSSHAG00000010911) #34	GLIS2 (ENSSHAG00000027247) #35	TFAP4 (ENSSHAG00000011487) #36	SRL (ENSSHAG00000011715) #37	ADCY9 (ENSSHAG00000012593)	CREBBP (ENSSHAG00000013866)	TRAP1 (ENSSHAG00000014559)	DNASE1 (ENSSHAG00000014640)	ENSSHAG00000014874	ENSSHAG00000027277	NLRC3 (ENSSHAG00000015094)	CLUAP1 (ENSSHAG00000015334)	C16orf90 (ENSSHAG00000020997)	NAA60 (ENSSHAG00000015512)	ENSSHAG00000025643 ##22	ENSSHAG00000015817 ##22	OR2C1 (ENSSHAG00000015908)	ENSSHAG00000022378	ENSSHAG00000016146	ENSSHAG00000021708	TIGD7 (ENSSHAG00000026550)	ENSSHAG00000002634	ENSSHAG00000016426	ZNF200 (ENSSHAG00000022067)	ENSSHAG00000029853	OR1F1 (ENSSHAG00000016771)	ENSSHAG00000017117	ENSSHAG00000026381	ENSSHAG00000031619	ZSCAN10 (ENSSHAG00000031007)	MMP25 (ENSSHAG00000027271)
Eutheria	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Carnivora	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Felidae	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Cat	MODERN SPECIES	246	ENSFCAG00000049925	ENSFCAG00000030942	ZNF772 (ENSFCAG00000039997)	ENSFCAG00000049647	ENSFCAG00000053082	ZNF548 (ENSFCAG00000037744)	ENSFCAG00000040726	ZNF304 (ENSFCAG00000037528)	ZNF543 (ENSFCAG00000035951)	ZNF460 (ENSFCAG00000013572)	ENSFCAG00000050672	AURKC (ENSFCAG00000002481)	ENSFCAG00000047564	ENSFCAG00000051806	PEG3 (ENSFCAG00000033639)	ENSFCAG00000044391 ##22	ENSFCAG00000031979	ENSFCAG00000031893	SMIM17 (ENSFCAG00000034279)	ZNF470 (ENSFCAG00000037563)	ZFP28 (ENSFCAG00000034356)	ZNF471 (ENSFCAG00000025726)	ENSFCAG00000045206	ENSFCAG00000040628	ZNF667 (ENSFCAG00000033432)	EDDM13 (ENSFCAG00000043100)	ENSFCAG00000041174	GALP (ENSFCAG00000040438)	ENSFCAG00000028229	ZNF787 (ENSFCAG00000041841)	NLRP5 (ENSFCAG00000028778)
Sauria	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Lepidosauria	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Episquamata	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Laterata	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000000344	ENSPMRG00000000318	ENSPMRG00000000298	ENSPMRG00000000260	ENSPMRG00000000216	ENSPMRG00000000192	ENSPMRG00000000176	ENSPMRG00000000150	ENSPMRG00000001456	ENSPMRG00000001449	ENSPMRG00000001442	ENSPMRG00000001433	ENSPMRG00000001421	ENSPMRG00000001415	ENSPMRG00000001407	ENSPMRG00000001399 ##22	ENSPMRG00000001390	ENSPMRG00000001385	ENSPMRG00000001375	ENSPMRG00000001365	ENSPMRG00000001355	ENSPMRG00000001346	ENSPMRG00000001327	ENSPMRG00000001304	ENSPMRG00000001295	ENSPMRG00000001289	ENSPMRG00000001263	ENSPMRG00000001249	ENSPMRG00000001235	ENSPMRG00000001228	ENSPMRG00000001189
Argentine black and white tegu	MODERN SPECIES	72	ENSSMRG00000004203	ENSSMRG00000004201	ENSSMRG00000004200	ENSSMRG00000004197	ENSSMRG00000004194	ENSSMRG00000004185	ENSSMRG00000004183	ENSSMRG00000004182	ENSSMRG00000004181	ENSSMRG00000004176	ENSSMRG00000004172	ENSSMRG00000004167	ENSSMRG00000004160	ENSSMRG00000004157	ENSSMRG00000004156	ENSSMRG00000004152 ##22	ENSSMRG00000004149	ENSSMRG00000004148	ENSSMRG00000004147	ENSSMRG00000004145	ENSSMRG00000004140	ENSSMRG00000004138	ENSSMRG00000004136	ENSSMRG00000004133	ENSSMRG00000004130	ENSSMRG00000004129	ENSSMRG00000004121	ENSSMRG00000004115	ENSSMRG00000004113	ENSSMRG00000004112	ENSSMRG00000004110
Toxicofera	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Mainland tiger snake	MODERN SPECIES	189	ENSNSUG00000014722	ENSNSUG00000014723	ENSNSUG00000014725	ENSNSUG00000014728	GABBR1 (ENSNSUG00000014731)	RNF225 (ENSNSUG00000014772)	RPS5 (ENSNSUG00000014774)	ENSNSUG00000014777	ENSNSUG00000014779	ENSNSUG00000014780	SH3BP5L (ENSNSUG00000014781)	ENSNSUG00000014782	ENSNSUG00000014784	ENSNSUG00000014785	ENSNSUG00000014786	ENSNSUG00000014789 ##22	ENSNSUG00000014790	HDAC11 (ENSNSUG00000014793)	PANK3 (ENSNSUG00000014796)	ENSNSUG00000014825	ENSNSUG00000014826	ENSNSUG00000014827	ENSNSUG00000014828
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1	ENSACAG00000042059	ENSACAG00000043129	ENSACAG00000035575	ENSACAG00000034779	ENSACAG00000021147	ENSACAG00000042709	ENSACAG00000022627	ENSACAG00000035769	ENSACAG00000043336 ##22	ENSACAG00000028305	ENSACAG00000028824	ENSACAG00000035053	ENSACAG00000022907	ENSACAG00000022586	ENSACAG00000038310	ENSACAG00000040172 ##22	ENSACAG00000008664	ENSACAG00000008669	ENSACAG00000044377	ENSACAG00000039785	ENSACAG00000028998	ENSACAG00000024991	ENSACAG00000038734	ENSACAG00000038916	ENSACAG00000029675	ENSACAG00000040418	ENSACAG00000043491	ENSACAG00000028732	ENSACAG00000043837	ENSACAG00000044287	ENSACAG00000008675
Lizard	MODERN SPECIES	1	ENSACAG00000043950	ENSACAG00000043696	ENSACAG00000025475	ENSACAG00000028022	ENSACAG00000022007	ENSACAG00000029105	ENSACAG00000043779	ENSACAG00000042059	ENSACAG00000043129	ENSACAG00000035575	ENSACAG00000034779	ENSACAG00000021147	ENSACAG00000042709	ENSACAG00000022627	ENSACAG00000035769	ENSACAG00000043336 ##22	ENSACAG00000028305	ENSACAG00000028824	ENSACAG00000035053	ENSACAG00000022907	ENSACAG00000022586	ENSACAG00000038310	ENSACAG00000040172 ##22	ENSACAG00000008664	ENSACAG00000008669	ENSACAG00000044377	ENSACAG00000039785	ENSACAG00000028998	ENSACAG00000024991	ENSACAG00000038734	ENSACAG00000038916
Archelosauria	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Archosauria	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Australian saltwater crocodile	MODERN SPECIES	55	ENSCPRG00005010299	ENSCPRG00005010317	UNC93B1 (ENSCPRG00005010370)	FNTB (ENSCPRG00005010379)	MAX (ENSCPRG00005010392)	RAB15 (ENSCPRG00005010398)	GPX2 (ENSCPRG00005010413)	SPTBN2 (ENSCPRG00005010836)	ENSCPRG00005013619	ENSCPRG00005013622	ENSCPRG00005013626	CCS (ENSCPRG00005013629)	ENSCPRG00005013631	ENSCPRG00005013634	ENSCPRG00005013641	ENSCPRG00005013657 ##22	ZNRD2 (ENSCPRG00005013669)	ENSCPRG00005013672	ENSCPRG00005013676	ENSCPRG00005013681	NUP160 (ENSCPRG00005013720)	FNBP4 (ENSCPRG00005013888)	AGBL2 (ENSCPRG00005013922)
Cryptodira	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	753																ENSPSIG00000016526 ##22
Chinese turtle	MODERN SPECIES	1786															ENSPSIG00000001608	ENSPSIG00000016033 ##22	ENSPSIG00000016247
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Testudinidae	ANCESTRAL SPECIES																	ENSGT00940000154740.b ##22
Abingdon island giant tortoise	MODERN SPECIES	744	ENSCABG00000009345	ENSCABG00000009344	CCDC105 (ENSCABG00000009329)	RPS5 (ENSCABG00000009325)	ENSCABG00000009322	GABBR1 (ENSCABG00000009313)	ENSCABG00000009309	ENSCABG00000009307	ENSCABG00000009306	ENSCABG00000009304	ENSCABG00000009301	ENSCABG00000009300	ENSCABG00000009299	ENSCABG00000009295	ENSCABG00000009289	ENSCABG00000009287 ##22
Emydidae	DUPLICATION
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000154740.b.e ##22
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	1119											ENSCPBG00000018660	ENSCPBG00000018654	ENSCPBG00000018649	ENSCPBG00000018648	ENSCPBG00000018644	ENSCPBG00000018638 ##22	ENSCPBG00000018636	ENSCPBG00000018634	ENSCPBG00000018630	ENSCPBG00000018624
painted turtle	MODERN SPECIES	1087												ENSCPBG00000001129	ENSCPBG00000001181	ENSCPBG00000001279	ENSCPBG00000001297	ENSCPBG00000001318 ##22	ENSCPBG00000001329	ENSCPBG00000001348	ENSCPBG00000001421
Emydidae	DUPLICATION
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000154740.b.f.a ##22
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	1216														ENSCPBG00000006562	ENSCPBG00000006567	ENSCPBG00000006576 ##22
painted turtle	MODERN SPECIES		ENSCPBG00000020722	ENSCPBG00000020720	ENSCPBG00000020716	ENSCPBG00000020713	ENSCPBG00000020710	ENSCPBG00000020706	ENSCPBG00000020702	ENSCPBG00000020699	ENSCPBG00000020693	ENSCPBG00000020689	ENSCPBG00000020681	ENSCPBG00000020671	ENSCPBG00000020668	ENSCPBG00000020664	ENSCPBG00000020661	ENSCPBG00000020659 ##22	ENSCPBG00000020657	ENSCPBG00000020652	RACK1 (ENSCPBG00000020646)	ENSCPBG00000020640	ENSCPBG00000020637	ENSCPBG00000020632	ENSCPBG00000020630	ENSCPBG00000020628	ENSCPBG00000020625	ENSCPBG00000020622	ENSCPBG00000020603	ENSCPBG00000020565	AMER2 (ENSCPBG00000020548)	MTMR6 (ENSCPBG00000020546)	NUP58 (ENSCPBG00000020541)
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000154740.b.f.b ##22
Three-toed box turtle	MODERN SPECIES	813																ENSTMTG00000011760 ##22
painted turtle	MODERN SPECIES	1250									ENSCPBG00000009934	ENSCPBG00000009946	ENSCPBG00000009949	ENSCPBG00000009951	ENSCPBG00000009952	ENSCPBG00000009960	ENSCPBG00000009962	ENSCPBG00000009964 ##22