Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000153277.A.b.b.a.a.b ##15	ENSGT00940000153686.`b.b.b #7	ENSGT00940000153277.A.b.b.a.a.a #8	ENSGT00940000153277.A.b.a.b.c.a.a #9	ENSGT00940000163651 #11	ENSGT00940000153277.A.b.a.b.c.a.b #12	ENSGT00940000153686.`b.a #13	ENSGT00940000153277.A.b.a.b.c.b #14	ENSGT00940000153277.B #15	ENSGT00940000163151 #16	ENSGT00940000164232 #17	ENSGT00940000163292.d #18	ENSGT00940000162380 #19	ENSGT00950000183169.B #20	ENSGT00390000003354 #21	ENSGT00390000001945 #22	ENSGT00640000091578 #23	ENSGT00940000159148 #24	ENSGT00940000162394 #25	ENSGT00940000155412.b #26	ENSGT00390000005065 #27	ENSGT00940000160969 #28	ENSGT00530000064158 #29	ENSGT00510000047802 #30	ENSGT00390000005100 #31	ENSGT01050000244887.A.a.a.b #32	ENSGT00390000014512 #33	ENSGT00940000162311 #34	ENSGT00940000162431 #35	ENSGT00940000162184 #36	ENSGT00470000042444 #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000153277.A.b.b.a.a.b ##15	ENSGT00940000153686.`b.b.b #7	ENSGT00940000153277.A.b.b.a.a.a #8	ENSGT00940000153277.A.b.a.b.c.a.a #9	ENSGT00940000163651.d #10	ENSGT00940000153277.A.b.a.b.c.a.b #12	ENSGT00940000153686.`b.a #13	ENSGT00940000153277.A.b.a.b.c.b #14	ENSGT00940000153277.B #15	ENSGT00940000163151 #16	ENSGT00940000164232 #17	ENSGT00940000163292.d #18	ENSGT00940000162380 #19	ENSGT00950000183169.B #20	ENSGT00390000003354 #21	ENSGT00390000001945 #22	ENSGT00640000091578 #23	ENSGT00940000159148 #24	ENSGT00940000162394 #25	ENSGT00940000155412.b #26	ENSGT00390000005065 #27	ENSGT00940000160969 #28	ENSGT00530000064158 #29	ENSGT00510000047802 #30	ENSGT00390000005100 #31	ENSGT01050000244887.A.a.a.b #32	ENSGT00390000014512 #33	ENSGT00940000162311 #34	ENSGT00940000162431 #35	ENSGT00940000162184 #36	ENSGT00470000042444 #37
Mouse	DUPLICATION
Mouse	MODERN SPECIES	18	Or7d11 (ENSMUSG00000044454) #7	Or7e174 (ENSMUSG00000044106) #8	Or7e175 (ENSMUSG00000058491) #9	Or8b12i (ENSMUSG00000066899) #10	Or7h8 (ENSMUSG00000061457) #11	Or7e176 (ENSMUSG00000066897) #12	Or7d9 (ENSMUSG00000059623) #13	Or7e177 (ENSMUSG00000049028) #14	Or7e178 (ENSMUSG00000066896) #15	Zfp560 (ENSMUSG00000045519) #16	Zfp26 (ENSMUSG00000063108) #17	Zfp426 (ENSMUSG00000059475) #18	Zfp266 (ENSMUSG00000060510) #19	Zfp846 (ENSMUSG00000058192) #20	Fbxl12 (ENSMUSG00000066892) #21	Ubl5 (ENSMUSG00000084786) #22	Pin1 (ENSMUSG00000032171) #23	Olfm2 (ENSMUSG00000032172) #24	Col5a3 (ENSMUSG00000004098) #25	Rdh8 (ENSMUSG00000053773) #26	Shfl (ENSMUSG00000038884) #27	Angptl6 (ENSMUSG00000038742) #28	Ppan (ENSMUSG00000004100) #29	Eif3g (ENSMUSG00000070319) #30	Dnmt1 (ENSMUSG00000004099) #31	S1pr2 (ENSMUSG00000043895) #32	Mrpl4 (ENSMUSG00000003299) #33	Icam1 (ENSMUSG00000037405) #34	Icam4 (ENSMUSG00000001014) #35	Icam5 (ENSMUSG00000032174) #36	Zglp1 (ENSMUSG00000079681) #37
Mouse	DUPLICATION
Mouse	MODERN SPECIES	3	Dio2 (ENSMUSG00000007682)	Nrxn3 (ENSMUSG00000066392)	Adck1 (ENSMUSG00000021044)	Eif1ad15 (ENSMUSG00000093847)	Eif1ad7 (ENSMUSG00000079029)	Eif1ad10 (ENSMUSG00000095799)	Pramel51 (ENSMUSG00000066027)	Eif1ad18 (ENSMUSG00000114075)	Eif1ad11 (ENSMUSG00000095717)	Eif1ad16 (ENSMUSG00000096803)	Eif1ad17 (ENSMUSG00000096049)	Gm2042 (ENSMUSG00000096276)	Eif1ad14 (ENSMUSG00000096619)	Eif1ad4 (ENSMUSG00000113971)	Eif1ad3 (ENSMUSG00000072905)	Ubl5c (ENSMUSG00000113951) ##22	Eif1ad2 (ENSMUSG00000079031)	Eif1ad13 (ENSMUSG00000113201)	Eif1ad19 (ENSMUSG00000095724)	Ubl5b (ENSMUSG00000113489) ##22	Eif1ad6 (ENSMUSG00000092019)	Oog1 (ENSMUSG00000096576)	Eif1ad8 (ENSMUSG00000079034)	Eif1ad12 (ENSMUSG00000113805)	Snw1 (ENSMUSG00000021039)	Slirp (ENSMUSG00000021040)	Alkbh1 (ENSMUSG00000079036)	Sptlc2 (ENSMUSG00000021036)	Ism2 (ENSMUSG00000050671)	Ahsa1 (ENSMUSG00000021037)	Vipas39 (ENSMUSG00000021038)
Mouse	MODERN SPECIES	3	Eif1ad7 (ENSMUSG00000079029)	Eif1ad10 (ENSMUSG00000095799)	Pramel51 (ENSMUSG00000066027)	Eif1ad18 (ENSMUSG00000114075)	Eif1ad11 (ENSMUSG00000095717)	Eif1ad16 (ENSMUSG00000096803)	Eif1ad17 (ENSMUSG00000096049)	Gm2042 (ENSMUSG00000096276)	Eif1ad14 (ENSMUSG00000096619)	Eif1ad4 (ENSMUSG00000113971)	Eif1ad3 (ENSMUSG00000072905)	Ubl5c (ENSMUSG00000113951) ##22	Eif1ad2 (ENSMUSG00000079031)	Eif1ad13 (ENSMUSG00000113201)	Eif1ad19 (ENSMUSG00000095724)	Ubl5b (ENSMUSG00000113489) ##22	Eif1ad6 (ENSMUSG00000092019)	Oog1 (ENSMUSG00000096576)	Eif1ad8 (ENSMUSG00000079034)	Eif1ad12 (ENSMUSG00000113805)	Snw1 (ENSMUSG00000021039)	Slirp (ENSMUSG00000021040)	Alkbh1 (ENSMUSG00000079036)	Sptlc2 (ENSMUSG00000021036)	Ism2 (ENSMUSG00000050671)	Ahsa1 (ENSMUSG00000021037)	Vipas39 (ENSMUSG00000021038)	Noxred1 (ENSMUSG00000072919)	Samd15 (ENSMUSG00000090812)	Tmed8 (ENSMUSG00000034111)	Gstz1 (ENSMUSG00000021033)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000153277.A.b.b.a.a.b ##15	ENSGT00940000153686.`b.b.b #7	ENSGT00940000153277.A.b.b.a.a.a #8	ENSGT00940000153277.A.b.a.b.c.a.a #9	ENSGT00940000163651.d #10	ENSGT00940000153277.A.b.a.b.c.a.b #12	ENSGT00940000153686.`b.a #13	ENSGT00940000153277.A.b.a.b.c.b #14	ENSGT00940000153277.B #15	ENSGT00940000163151 #16	ENSGT00940000164232 #17	ENSGT00940000163292.d #18	ENSGT00940000162380 #19	ENSGT00940000163292.c.a ##18	ENSGT00390000003354 #21	ENSGT00390000001945 #22	ENSGT00640000091578 #23	ENSGT00940000159148 #24	ENSGT00940000162394 #25	ENSGT00940000155412.b #26	ENSGT00390000005065 #27	ENSGT00940000160969 #28	ENSGT00530000064158 #29	ENSGT00510000047802 #30	ENSGT00390000005100 #31	ENSGT01050000244887.A.a.a.b #32	ENSGT00390000014512 #33	ENSGT00940000162311 #34	ENSGT00940000162431 #35	ENSGT00940000162184 #36	ENSGT00470000042444 #37
spretus	MODERN SPECIES	18	Or7d10 (MGP_SPRETEiJ_G0032952) ##13	Or7e173 (MGP_SPRETEiJ_G0032953) ##15	Or7d11 (MGP_SPRETEiJ_G0032954) #7	Or7e174 (MGP_SPRETEiJ_G0032955) #8	MGP_SPRETEiJ_G0032956 #9	Or7e176 (MGP_SPRETEiJ_G0032957) #12	Or7d9 (MGP_SPRETEiJ_G0032958) #13	Or7e177 (MGP_SPRETEiJ_G0032959) #14	Or7e178 (MGP_SPRETEiJ_G0032960) #15	Zfp560 (MGP_SPRETEiJ_G0032961) #16	Zfp26 (MGP_SPRETEiJ_G0032962) #17	Zfp426 (MGP_SPRETEiJ_G0032963) #18	Zfp266 (MGP_SPRETEiJ_G0032964) #19	MGP_SPRETEiJ_G0032965 ##18	Fbxl12 (MGP_SPRETEiJ_G0032966) #21	Ubl5 (MGP_SPRETEiJ_G0032967) #22	Pin1 (MGP_SPRETEiJ_G0032968) #23	Olfm2 (MGP_SPRETEiJ_G0032969) #24	Col5a3 (MGP_SPRETEiJ_G0032970) #25	Rdh8 (MGP_SPRETEiJ_G0032971) #26	Shfl (MGP_SPRETEiJ_G0032972) #27	Angptl6 (MGP_SPRETEiJ_G0032973) #28	Ppan (MGP_SPRETEiJ_G0032974) #29	Eif3g (MGP_SPRETEiJ_G0032975) #30	Dnmt1 (MGP_SPRETEiJ_G0032976) #31	S1pr2 (MGP_SPRETEiJ_G0032977) #32	Mrpl4 (MGP_SPRETEiJ_G0032978) #33	Icam1 (MGP_SPRETEiJ_G0032979) #34	Icam4 (MGP_SPRETEiJ_G0032980) #35	Icam5 (MGP_SPRETEiJ_G0032981) #36	Zglp1 (MGP_SPRETEiJ_G0032982) #37
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3115					Or7e176 (ENSMSIG00000018169) #12	Or7d9 (ENSMSIG00000018161) #13	Or7e177 (ENSMSIG00000018139) #14	Or7e178 (ENSMSIG00000018136) #15	Zfp560 (ENSMSIG00000018126) #16	Zfp26 (ENSMSIG00000018099) #17	Zfp426 (ENSMSIG00000017986) #18	Zfp266 (ENSMSIG00000017958) #19	ENSMSIG00000017949	ENSMSIG00000017921	Fbxl12 (ENSMSIG00000017903) #21	Ubl5 (ENSMSIG00000017855) #22	Pin1 (ENSMSIG00000017849) #23	Olfm2 (ENSMSIG00000017812) #24	Col5a3 (ENSMSIG00000017680) #25	Rdh8 (ENSMSIG00000017665) #26	Shfl (ENSMSIG00000017630) #27	Angptl6 (ENSMSIG00000017615) #28	Ppan (ENSMSIG00000017577) #29	Eif3g (ENSMSIG00000017537) #30	Dnmt1 (ENSMSIG00000017200) #31	S1pr2 (ENSMSIG00000017197) #32	Mrpl4 (ENSMSIG00000017179) #33	Icam1 (ENSMSIG00000017165) #34	Icam4 (ENSMSIG00000017145) #35	Icam5 (ENSMSIG00000017102) #36	Zglp1 (ENSMSIG00000017087) #37
Steppe mouse	MODERN SPECIES	594																ENSMSIG00000007475 #22
Ryukyu mouse	MODERN SPECIES	3	Zc3h14 (MGP_CAROLIEiJ_G0018012)	Ptpn21 (MGP_CAROLIEiJ_G0018011)	Spata7 (MGP_CAROLIEiJ_G0018010)	Kcnk10 (MGP_CAROLIEiJ_G0018009)	Gpr65 (MGP_CAROLIEiJ_G0018008)	Galc (MGP_CAROLIEiJ_G0018007)	Flrt2 (MGP_CAROLIEiJ_G0018006)	Sel1l (MGP_CAROLIEiJ_G0018005)	Ston2 (MGP_CAROLIEiJ_G0018004)	Gtf2a1 (MGP_CAROLIEiJ_G0018003)	Tshr (MGP_CAROLIEiJ_G0018002)	Cep128 (MGP_CAROLIEiJ_G0018001)	MGP_CAROLIEiJ_G0018000	Nrxn3 (MGP_CAROLIEiJ_G0017999)	Adck1 (MGP_CAROLIEiJ_G0017998)	MGP_CAROLIEiJ_G0017997 #22	Snw1 (MGP_CAROLIEiJ_G0017996)	Slirp (MGP_CAROLIEiJ_G0017995)	Sptlc2 (MGP_CAROLIEiJ_G0017993)	Ism2 (MGP_CAROLIEiJ_G0017992)	Ahsa1 (MGP_CAROLIEiJ_G0017991)	Vipas39 (MGP_CAROLIEiJ_G0017990)	Noxred1 (MGP_CAROLIEiJ_G0017989)	Samd15 (MGP_CAROLIEiJ_G0017988)	Tmed8 (MGP_CAROLIEiJ_G0017987)	Gstz1 (MGP_CAROLIEiJ_G0017986)	Pomt2 (MGP_CAROLIEiJ_G0017985)	Ngb (MGP_CAROLIEiJ_G0017984)	Tmem63c (MGP_CAROLIEiJ_G0017983)	Zdhhc22 (MGP_CAROLIEiJ_G0017982)	Cipc (MGP_CAROLIEiJ_G0017981)